Citrus Sinensis ID: 032616

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------
Protein Sequence
MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLHFAS
Secondary Structure (PSIPRED)
ccEEEEccccccccccccccccccccEEEEEEccHHHHHHHHHHccccEEEEEEEcccEEEEEEEEEcccccEEEEEcccccccEEccccccccccccccccccccHHHHHcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEcccccccccccccccccccccEEEEcHHHHHHHHHHHHccccEEEEEEEcccEEEEEEEEEcccccEEEEEccccccEEEccccccccccccccccHHHccccccccccccccccccccEcccHHHHHccc
Coil and Loop (DISEMBL)
mgihllkseepdnlpkagkninpkdnhisfqcENMAIVERRLKEMKIDYVKSRveegginvdqlffhdpdgsmieicncdvlpvvplagdavrirsctstvncnfhqqqiqqepqinpqsclsdsihakedflhfas
Flexible Loop (DISEMBL)
mgihllkseepdnlpkagkninpkdnhisfQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLHFAS
Low Complexity Region (SEG)
MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHqqqiqqepqinpqSCLSDSIHAKEDFLHFAS
Disordered region (IsUnstruct)
**************************HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQ*****************************
Disordered Region (DISOPRED)
MGIHLL*S************INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRS*******************************AKEDFLHFA*
Disordered Region (DISEMBL)
MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLHFAS
Disordered Region (DISPRO)
MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTV***************************K*DFLHFAS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQEPQINPQSCLSDSIHAKEDFLHFAS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	137
225445448	195	PREDICTED: metallothiol transferase fosB	0.751	0.528	0.740	5e-37
255566967	193	lactoylglutathione lyase, putative [Rici	0.744	0.528	0.728	2e-36
449436156	169	PREDICTED: uncharacterized protein LOC10	0.693	0.562	0.724	5e-34
255553127	172	lactoylglutathione lyase, putative [Rici	0.788	0.627	0.657	8e-34
255636198	172	unknown [Glycine max]	0.781	0.622	0.675	9e-34
242087077	219	hypothetical protein SORBIDRAFT_09g00527	0.693	0.433	0.742	2e-33
226500126	221	lactoylglutathione lyase [Zea mays] gi|1	0.656	0.407	0.755	4e-33
317106739	172	JHL06P13.16 [Jatropha curcas]	0.693	0.552	0.704	8e-33
194466169	181	lactoylglutathione lyase [Arachis hypoga	0.890	0.674	0.571	1e-32
351723359	172	uncharacterized protein LOC100306100 [Gl	0.693	0.552	0.693	1e-32

>gi|225445448|ref|XP_002285087.1| PREDICTED: metallothiol transferase fosB [Vitis vinifera] gi|147821406|emb|CAN63501.1| hypothetical protein VITISV_011676 [Vitis vinifera] gi|297738928|emb|CBI28173.3| unnamed protein product [Vitis vinifera]

 Score =  158 bits (400), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 77/104 (74%), Positives = 88/104 (84%), Gaps = 1/104 (0%)

Query: 1   MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 60
           MGIHLL+SE+PDN+PK  + INPKDNHISFQCE+MA VE++LKEMKI+YV+SRVEEGGI 
Sbjct: 58  MGIHLLQSEDPDNMPKISQQINPKDNHISFQCESMATVEKKLKEMKIEYVQSRVEEGGIC 117

Query: 61  VDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCN 104
           VDQLFFHDPDGSMIEICNCD LPV+PL G       C S +NCN
Sbjct: 118 VDQLFFHDPDGSMIEICNCDNLPVIPLGGGGGDTTLC-SRINCN 160

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566967|ref|XP_002524466.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223536254|gb|EEF37906.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/107 (72%), Positives = 92/107 (85%), Gaps = 5/107 (4%)

Query: 1   MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 60
           +GIHLL+SE+P+N+PK  + INPKDNHISFQCE+MA VE+RL+EMK++ VK RVEEGGI 
Sbjct: 59  IGIHLLQSEDPENMPKINQ-INPKDNHISFQCESMATVEKRLQEMKVECVKGRVEEGGIY 117

Query: 61  VDQLFFHDPDGSMIEICNCDVLPVVPLAGD---AVRIRSCTSTVNCN 104
           VDQLFFHDPDGSMIEICNCDVLPV+PL GD    V +RSC S +NCN
Sbjct: 118 VDQLFFHDPDGSMIEICNCDVLPVIPLGGDNNNNVMVRSC-SLLNCN 163

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436156|ref|XP_004135860.1| PREDICTED: uncharacterized protein LOC101209593 [Cucumis sativus] gi|449491017|ref|XP_004158775.1| PREDICTED: uncharacterized LOC101209593 [Cucumis sativus]

 Score =  149 bits (375), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 71/98 (72%), Positives = 85/98 (86%), Gaps = 3/98 (3%)

Query: 1   MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 60
           +GIHLL+SE+P+NLPK GK INPKDNHISFQCE+M  VE++LKEM+I+YV++ VEEGGI 
Sbjct: 58  IGIHLLQSEKPENLPKKGK-INPKDNHISFQCESMGAVEKKLKEMEIEYVRAVVEEGGIQ 116

Query: 61  VDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 98
           VDQLFFHDPDG MIEICNCD LPV+PL G+    RSC+
Sbjct: 117 VDQLFFHDPDGFMIEICNCDNLPVIPLGGEVS--RSCS 152

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553127|ref|XP_002517606.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223543238|gb|EEF44770.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  148 bits (373), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 75/114 (65%), Positives = 92/114 (80%), Gaps = 6/114 (5%)

Query: 1   MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 60
           +GIHLL+SE+P+N+PK  + INPKDNHISFQCE+M  VE++LKEM+I YV++ VEEGGI+
Sbjct: 58  IGIHLLQSEDPENMPKKSE-INPKDNHISFQCESMGAVEKKLKEMEIKYVRATVEEGGIH 116

Query: 61  VDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNF--HQQQIQQ 112
           VDQLFFHDPDG MIEICNCD LPV+PLAG+    RSC S VN     H +Q+ Q
Sbjct: 117 VDQLFFHDPDGFMIEICNCDSLPVIPLAGEMA--RSC-SRVNLQMIQHNKQMHQ 167

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255636198|gb|ACU18440.1| unknown [Glycine max]

 Score =  147 bits (372), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 75/111 (67%), Positives = 87/111 (78%), Gaps = 4/111 (3%)

Query: 1   MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 60
           +GIHLL++E P+ LPK  K INPKDNHISFQCE+M  VE++LKEM+IDYV++ VEEGGI 
Sbjct: 58  IGIHLLEAENPEKLPKK-KEINPKDNHISFQCESMVAVEKKLKEMEIDYVRATVEEGGIQ 116

Query: 61  VDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQ 111
           VDQLFFHDPDG MIEICNCD LPV+PL G+    RSC S VN    Q Q Q
Sbjct: 117 VDQLFFHDPDGFMIEICNCDSLPVIPLVGEVA--RSC-SLVNLEKMQNQQQ 164

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242087077|ref|XP_002439371.1| hypothetical protein SORBIDRAFT_09g005270 [Sorghum bicolor] gi|241944656|gb|EES17801.1| hypothetical protein SORBIDRAFT_09g005270 [Sorghum bicolor]

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/97 (74%), Positives = 84/97 (86%), Gaps = 2/97 (2%)

Query: 1   MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 60
           +GIHLL+SE+P +LP+ G+ INPKDNHISFQCE+M  VERRLKEM I YV+  VEEGGIN
Sbjct: 70  IGIHLLQSEDPGSLPEKGE-INPKDNHISFQCESMVAVERRLKEMGIPYVQRCVEEGGIN 128

Query: 61  VDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSC 97
           VDQ+FFHDPDG MIEICNCD LPV+PLAG AV++ SC
Sbjct: 129 VDQIFFHDPDGFMIEICNCDNLPVIPLAG-AVQLGSC 164

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226500126|ref|NP_001149571.1| lactoylglutathione lyase [Zea mays] gi|194700264|gb|ACF84216.1| unknown [Zea mays] gi|195628124|gb|ACG35892.1| lactoylglutathione lyase [Zea mays] gi|413948741|gb|AFW81390.1| lactoylglutathione lyase [Zea mays]

 Score =  145 bits (367), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 68/90 (75%), Positives = 76/90 (84%)

Query: 1   MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 60
           +GIHLL+SE+P +LP     INPKDNHISFQCE+M  VERRLKE+ I YV+  VEEGGIN
Sbjct: 67  IGIHLLQSEDPGSLPPEKGEINPKDNHISFQCESMVAVERRLKEIGIPYVQRCVEEGGIN 126

Query: 61  VDQLFFHDPDGSMIEICNCDVLPVVPLAGD 90
           VDQ+FFHDPDG MIEICNCD LPVVPLAGD
Sbjct: 127 VDQIFFHDPDGFMIEICNCDNLPVVPLAGD 156

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|317106739|dbj|BAJ53235.1| JHL06P13.16 [Jatropha curcas]

 Score =  144 bits (364), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 69/98 (70%), Positives = 83/98 (84%), Gaps = 3/98 (3%)

Query: 1   MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 60
           +GIHLL+SE+PDN+PK    INPKDNHISFQCE+M  VE++LKEM I +V++ VEEGGI+
Sbjct: 58  IGIHLLQSEDPDNMPKK-TEINPKDNHISFQCESMGAVEKKLKEMGIKHVRAMVEEGGIH 116

Query: 61  VDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 98
           VDQLFFHDPDG MIEICNCD LPV+PLAG+    RSC+
Sbjct: 117 VDQLFFHDPDGFMIEICNCDSLPVIPLAGEVA--RSCS 152

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|194466169|gb|ACF74315.1| lactoylglutathione lyase [Arachis hypogaea]

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/126 (57%), Positives = 94/126 (74%), Gaps = 4/126 (3%)

Query: 1   MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 60
           +GIHLL++E+P+ LPK  K INPKDNHISFQCE M  VE++LKEM I++V++RVEEGGI 
Sbjct: 58  IGIHLLQAEDPEKLPKK-KEINPKDNHISFQCECMEAVEKKLKEMDINHVRARVEEGGIQ 116

Query: 61  VDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVNCNFHQQQIQQEPQINPQS 120
           VDQLFFHDPDG M+EICNC+ LPV+PL G+    RSC+  +  + H+ +    PQ+    
Sbjct: 117 VDQLFFHDPDGFMVEICNCECLPVIPLVGEVA--RSCSRVIMTHHHRFR-TWSPQLPAGK 173

Query: 121 CLSDSI 126
            L+D I
Sbjct: 174 PLTDII 179

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723359|ref|NP_001237532.1| uncharacterized protein LOC100306100 [Glycine max] gi|255627549|gb|ACU14119.1| unknown [Glycine max]

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/98 (69%), Positives = 81/98 (82%), Gaps = 3/98 (3%)

Query: 1   MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 60
           +GIHLL++E P+ LPK  K INPKDNHISFQCE+M  VE++LKEM+IDY ++ VEEGGI 
Sbjct: 58  IGIHLLEAENPEKLPKK-KEINPKDNHISFQCESMVAVEKKLKEMEIDYARATVEEGGIQ 116

Query: 61  VDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 98
           VDQLFFHDPDG MIEICNCD LPV+PL G+    RSC+
Sbjct: 117 VDQLFFHDPDGFMIEICNCDSLPVIPLVGEVA--RSCS 152

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	137
TAIR|locus:2037728	174	GLYI4 "AT1G15380" [Arabidopsis	0.693	0.545	0.693	1.4e-32
TAIR|locus:2016254	167	GLYI7 "AT1G80160" [Arabidopsis	0.693	0.568	0.683	7.7e-32
TAIR|locus:2057522	184	GLYI8 "AT2G28420" [Arabidopsis	0.686	0.510	0.510	1.4e-23

TAIR|locus:2037728 GLYI4 "AT1G15380" [Arabidopsis thaliana (taxid:3702)]

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 68/98 (69%), Positives = 80/98 (81%)

Query:     1 MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 60
             +GIHLL + EP+ LPK    INPKDNHISFQCE+M +VE++L+EM IDYV++ VEEGGI 
Sbjct:    58 IGIHLLCAPEPEKLPKKTA-INPKDNHISFQCESMGVVEKKLEEMGIDYVRALVEEGGIQ 116

Query:    61 VDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 98
             VDQLFFHDPDG MIEICNCD LPVVPL G+  R  SC+
Sbjct:   117 VDQLFFHDPDGFMIEICNCDSLPVVPLVGEMAR--SCS 152

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR|locus:2016254 GLYI7 "AT1G80160" [Arabidopsis thaliana (taxid:3702)]

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 67/98 (68%), Positives = 81/98 (82%)

Query:     1 MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 60
             +GIHLL+S EP+ L K  + INPKDNHISFQCE+M  VE++LKEM+I+YV++ VEEGGI 
Sbjct:    58 IGIHLLQSPEPEKLLKKTE-INPKDNHISFQCESMEAVEKKLKEMEIEYVRAVVEEGGIQ 116

Query:    61 VDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCT 98
             VDQLFFHDPD  MIEICNCD LPV+PLAG+  R  SC+
Sbjct:   117 VDQLFFHDPDAFMIEICNCDSLPVIPLAGEMAR--SCS 152

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009414 "response to water deprivation" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2057522 GLYI8 "AT2G28420" [Arabidopsis thaliana (taxid:3702)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 49/96 (51%), Positives = 73/96 (76%)

Query:     1 MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRV-EEGGI 59
             +GIHL+++++ D LP    +++P DNHISFQCE+M  +E+RLKE+K+ Y+K  V +E   
Sbjct:    65 VGIHLVQAKDQDKLPSDTDHLDPMDNHISFQCEDMEALEKRLKEVKVKYIKRTVGDEKDA 124

Query:    60 NVDQLFFHDPDGSMIEICNCDVLPVVPL-AGDAVRI 94
              +DQLFF+DPDG M+EICNC+ L +VP  + DA+R+
Sbjct:   125 AIDQLFFNDPDGFMVEICNCENLELVPCHSADAIRL 160


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      137       124   0.00091  102 3  11 22  0.36    31
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  551 (59 KB)
  Total size of DFA:  134 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.03u 0.10s 12.13t   Elapsed:  00:00:01
  Total cpu time:  12.03u 0.10s 12.13t   Elapsed:  00:00:01
  Start:  Thu May  9 18:17:08 2013   End:  Thu May  9 18:17:09 2013

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009845 "seed germination" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00016866001 SubName- Full=Putative uncharacterized protein (Chromosome chr11 scaffold_13, whole genome shotgun sequence); (195 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	137
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	1e-18
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	9e-06
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	4e-05
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	8e-05
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	0.001
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	0.003

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 75.3 bits (186), Expect = 1e-18
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 6/74 (8%)

Query: 3   IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 62
           +HL++ + PD LP        +D+HI+F+ +++     RLK   + Y +S V   G  V 
Sbjct: 47  LHLIEEDPPDALP----EGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDG--VR 100

Query: 63  QLFFHDPDGSMIEI 76
           QLF  DPDG+ IE+
Sbjct: 101 QLFVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 41.6 bits (98), Expect = 9e-06
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 7/74 (9%)

Query: 3   IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 62
           + L + +EP      G        H++F+ +++     RLK   ++ +    EE      
Sbjct: 44  LELFEGDEPAPPSGGGGV------HLAFEVDDVDAAVERLKAAGVEILGGPREEPWGG-R 96

Query: 63  QLFFHDPDGSMIEI 76
             +F DPDG++IE+
Sbjct: 97  VAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 40.1 bits (94), Expect = 4e-05
 Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 27  HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC 77
           H+ F+ +++  +  RLK      ++   +       + +  DPDG++IE+ 
Sbjct: 60  HLYFEVDDLDALVARLKAAGGTILEPPEDTPW-GGREFYVRDPDGNLIELI 109

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 39.7 bits (92), Expect = 8e-05
 Identities = 15/52 (28%), Positives = 28/52 (53%)

Query: 26  NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC 77
            H++F+ ++ A  +  L  +  D V+  + E G     ++F DPDG +IE+ 
Sbjct: 86  GHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGVHVYFRDPDGILIELA 137

Length = 138

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.5 bits (85), Expect = 0.001
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%)

Query: 26  NHISFQCENMAIVER---RLKE--MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC 77
           +H++F+  +   V+    RL +   +I Y       GG     LFF DPDG  +E+ 
Sbjct: 70  HHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELV 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 34.9 bits (81), Expect = 0.003
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 6/55 (10%)

Query: 26  NHISFQCENMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC 77
           +HI+F   + A +E    RL+   +  V   V+  G     L+F DPDG  +E+ 
Sbjct: 75  HHIAFSVPSEASLEAWRERLRAAGVP-VSGVVDRFGERS--LYFEDPDGIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	137
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.42
PRK11478	129	putative lyase; Provisional	99.36
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.28
PRK10291	129	glyoxalase I; Provisional	99.27
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.24
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.23
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.22
PLN02367	233	lactoylglutathione lyase	99.2
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.2
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.2
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.19
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.19
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.19
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.18
PLN03042	185	Lactoylglutathione lyase; Provisional	99.18
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.17
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.15
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.15
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.13
PRK06724	128	hypothetical protein; Provisional	99.11
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.11
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.11
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.11
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.09
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.07
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.07
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.07
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.07
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.07
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.07
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.06
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.06
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.05
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.05
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.04
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.03
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.01
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.0
PRK04101	139	fosfomycin resistance protein FosB; Provisional	98.99
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	98.98
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	98.97
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	98.97
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	98.96
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	98.96
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	98.95
PLN02300	286	lactoylglutathione lyase	98.94
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	98.94
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	98.94
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	98.93
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	98.93
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	98.93
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	98.92
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	98.92
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	98.92
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	98.91
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	98.91
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	98.9
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	98.9
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	98.9
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	98.87
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	98.87
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	98.85
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	98.84
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	98.83
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	98.83
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	98.82
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	98.8
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	98.76
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	98.75
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	98.72
PLN02300	286	lactoylglutathione lyase	98.67
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	98.66
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	98.65
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	98.61
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	98.55
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	98.46
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	98.38
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	97.94
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	97.86
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	97.45
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	97.44
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	97.31
COG3324	127	Predicted enzyme related to lactoylglutathione lya	97.17
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	97.09
COG3607	133	Predicted lactoylglutathione lyase [General functi	96.82
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	96.63
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	96.0
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	95.8
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	95.79
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	95.6
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	95.52
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	94.9
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	94.37
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	93.72
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	93.44
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	93.42
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	93.21
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	93.2
PRK10148	147	hypothetical protein; Provisional	93.01
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	92.23
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	92.09
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	92.01
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	91.58
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	91.56
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	91.23
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	90.73
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	90.52
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	89.91
PRK11478	129	putative lyase; Provisional	89.62
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	88.95
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	86.8
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	86.56
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	85.99
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	85.86
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	84.2
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	83.67
PLN03042	185	Lactoylglutathione lyase; Provisional	83.0
cd04895	72	ACT_ACR_1 ACT domain-containing protein which is c	82.58
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	82.08
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	81.69
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	80.9
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	80.32

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.42  E-value=1.8e-12  Score=93.41  Aligned_cols=57  Identities=16%  Similarity=0.267  Sum_probs=48.4

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      +.+..|+||.|+|+++++++|+++|+++...+... ..+.+.+||+||||++|||++.
T Consensus        85 ~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~-~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          85 ALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQY-ENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCceEEEEEeCCHHHHHHHHHHCCCceeCCceec-CCCeEEEEEECCCCCEEEeeec
Confidence            44688999999999999999999999998755332 2346899999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK11478 putative lyase; Provisional

Probab=99.36  E-value=8.2e-12  Score=88.01  Aligned_cols=55  Identities=22%  Similarity=0.370  Sum_probs=45.4

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      .+..|+||.|+|+++++++|+++|+++...... ...|.+.+||+|||||.|||++
T Consensus        74 ~g~~hi~f~v~d~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         74 CGLRHLAFSVDDIDAAVAHLESHNVKCEAIRVD-PYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             CceeEEEEEeCCHHHHHHHHHHcCCeeeccccC-CCCCCEEEEEECCCCCEEEEEe
Confidence            467899999999999999999999998754322 1123589999999999999986

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.28  E-value=1.6e-11  Score=95.60  Aligned_cols=58  Identities=33%  Similarity=0.493  Sum_probs=50.3

Q ss_pred             CCCC-CCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           20 NINP-KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        20 ~inp-~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      +..| +++||||.|+|+++++++|+++||++...+ .+|.+ ...+|++|||||||||...
T Consensus       110 N~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~-~dGk~-K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  110 NKEPRGFGHICIEVDDINSACERLKEKGVRFKKKL-KDGKM-KPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             CCCCCccceEEEEeCCHHHHHHHHHHhCceeeecC-CCccc-cceeEEECCCCCeEEEeec
Confidence            5566 899999999999999999999999988775 44554 4799999999999999865

>PRK10291 glyoxalase I; Provisional

Probab=99.27  E-value=2e-11  Score=87.16  Aligned_cols=59  Identities=20%  Similarity=0.236  Sum_probs=47.5

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ++..|+||.|+|+++++++|+++|+++...+.+..+.+.+.+||+|||||+|||++..+
T Consensus        64 ~~~~hlaf~V~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         64 TAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             CCeeEEEEEeCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            46889999999999999999999999986542221112467899999999999998764

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.24  E-value=9e-11  Score=80.82  Aligned_cols=59  Identities=22%  Similarity=0.439  Sum_probs=47.2

Q ss_pred             CCCCCceEEEEeCC-HHHHHHHHHHCCcEEeeeccccCC--ceEEEEEEEcCCCCEEEEEee
Q 032616           21 INPKDNHISFQCEN-MAIVERRLKEMKIDYVKSRVEEGG--INVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        21 inp~~~HIAF~Ved-Id~v~~rLke~GI~~~~~~~~~~g--~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ..++..|++|.+++ +++++++|+++|+++...+....+  .+.+.+||+|||||+|||+++
T Consensus        64 ~~~~~~hi~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          64 PGPGSDDLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             CCCCCceEEEEecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            34578899999975 999999999999998865532111  124799999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.23  E-value=3.6e-11  Score=84.54  Aligned_cols=55  Identities=24%  Similarity=0.341  Sum_probs=46.0

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCc-EEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           24 KDNHISFQCENMAIVERRLKEMKI-DYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI-~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      +..|++|.|+|+|+++++|+++|+ ++...+.. ..+|.+.+||+|||||+|||.+.
T Consensus        64 ~~~~l~~~v~dvd~~~~~l~~~g~~~~~~~~~~-~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          64 NNFELYFEEEDFDAFLDKLKRYDNIEYVHPIKE-HPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             CceEEEEEehhhHHHHHHHHhcCCcEEecCccc-CCCccEEEEEECCCCCEEEEecc
Confidence            457999999999999999999985 67766543 33557999999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.22  E-value=7.4e-11  Score=81.67  Aligned_cols=54  Identities=20%  Similarity=0.250  Sum_probs=43.6

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEE
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC   77 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~   77 (137)
                      ++..|+||.|+   ++++++++|+++|+++...+.. .+.|.+.+||+|||||+|||.
T Consensus        69 ~g~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~~~~-~~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          69 TGWAHLAFSVGSKEAVDELTERLRADGYLIIGEPRT-TGDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CceEEEEEECCCHHHHHHHHHHHHHCCCEEEeCcee-cCCCeEEEEEECCCCCEEEeC
Confidence            46789999996   4899999999999999875532 223357789999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PLN02367 lactoylglutathione lyase

Probab=99.20  E-value=5.8e-11  Score=96.94  Aligned_cols=59  Identities=25%  Similarity=0.433  Sum_probs=50.3

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCCC
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLP   83 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~p   83 (137)
                      .+++||||.|+|+++++++|+++|+++...+.. +. +.+.+||+|||||+|||+++..+.
T Consensus       168 ~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~-g~-~~riaFIkDPDGn~IEL~e~~~~~  226 (233)
T PLN02367        168 RGFGHIGITVDDVYKACERFEELGVEFVKKPND-GK-MKGIAFIKDPDGYWIEIFDLKTIG  226 (233)
T ss_pred             CCceEEEEEcCCHHHHHHHHHHCCCEEEeCCcc-CC-ceEEEEEECCCCCEEEEEeccccc
Confidence            479999999999999999999999999976543 22 257899999999999999987643

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.20  E-value=1.7e-10  Score=79.45  Aligned_cols=56  Identities=25%  Similarity=0.371  Sum_probs=45.9

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      ..+..|++|.|+|+++++++|+++|+++...+.. ...+.+.+||.||+||+|||.+
T Consensus        70 ~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~~~-~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          70 ACGLRHLAFSVEDIEAAVKHLKAKGVEVEPIRVD-EFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             CCCceEEEEEeCCHHHHHHHHHHcCCcccccccc-CCCceEEEEEECCCCCEEEecC
Confidence            3467899999999999999999999998765422 1223578999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.20  E-value=1.3e-10  Score=87.75  Aligned_cols=60  Identities=15%  Similarity=0.148  Sum_probs=47.0

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeec-cc--cCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSR-VE--EGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~-~~--~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      .++..|+||.|+|+++++++|+++|+++.... ..  .++.+.+.+||+|||||+|||++...
T Consensus        91 ~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  153 (162)
T TIGR03645        91 KTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSY  153 (162)
T ss_pred             cccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcCh
Confidence            35789999999999999999999998765432 10  11112589999999999999998653

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.19  E-value=8.9e-11  Score=85.20  Aligned_cols=59  Identities=12%  Similarity=0.058  Sum_probs=50.7

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      .++..|+||.|+|+++++++|+++|+++...+.. ...+.+.+||+||||++|||++...
T Consensus        67 ~~g~~hia~~V~Dvda~~~~l~~~G~~v~~~p~~-~~~~~~~~~i~dp~G~~ie~~~~~~  125 (136)
T cd08342          67 GDGVCDVAFRVDDAAAAYERAVARGAKPVQEPVE-EPGELKIAAIKGYGDSLHTLVDRKG  125 (136)
T ss_pred             CCceEEEEEEeCCHHHHHHHHHHcCCeEccCcee-cCCeEEEEEEeccCCcEEEEEecCC
Confidence            4567899999999999999999999999987654 2245799999999999999998654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.19  E-value=1.1e-10  Score=78.31  Aligned_cols=68  Identities=38%  Similarity=0.708  Sum_probs=51.1

Q ss_pred             EEEeecCCCCCCCCCCCCCCCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEE
Q 032616            3 IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI   76 (137)
Q Consensus         3 IHLl~~~~~~~~~~~~~~inp~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI   76 (137)
                      +||++.......    +....+..|++|.|+|+++++++|+++|+++...+..  ..+.+.+||.|||||+|||
T Consensus        47 i~l~~~~~~~~~----~~~~~~~~~~~~~v~d~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          47 LHLIEEDPPDAL----PEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVP--GDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             EEEEecCCCccc----cCCCcccceEEEEeCCHHHHHHHHHHcCCCcccccCC--CCCccEEEEECCCCCEEeC
Confidence            666654433211    1234467899999999999999999999999876533  2335889999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.19  E-value=1.7e-10  Score=80.26  Aligned_cols=54  Identities=19%  Similarity=0.335  Sum_probs=45.8

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      ...|++|.|+|+++++++|+++|+++...+.. .++|.+.+||+|||||.|||++
T Consensus        66 ~~~~~~~~v~did~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          66 QGLILNFEVDDVDAEYERLKAEGLPIVLPLRD-EPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             ceEEEEEEECCHHHHHHHHHhcCCCeeecccc-CCCcceEEEEECCCCCEEEEEC
Confidence            34599999999999999999999998866533 2345799999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.18  E-value=2.4e-10  Score=79.06  Aligned_cols=52  Identities=29%  Similarity=0.464  Sum_probs=45.1

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEE
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC   77 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~   77 (137)
                      +..|++|.|+|+++++++|+++|+++...+...++  .+.+||+|||||+|||+
T Consensus        70 ~~~~i~~~v~did~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          70 GFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGM--KGIAFIKDPDGYWIELI  121 (121)
T ss_pred             CeEEEEEEeCCHHHHHHHHHHCCCEEeeCCccCCC--ceEEEEECCCCCEEEeC
Confidence            67899999999999999999999999987644322  47899999999999984

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.18  E-value=1.1e-10  Score=91.68  Aligned_cols=62  Identities=21%  Similarity=0.341  Sum_probs=52.2

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCCCCcc
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVP   86 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~p~~p   86 (137)
                      +++.|+||.|+|+++++++|+++|+++...+...  .+.+.+||+|||||+|||++..++.-|-
T Consensus       120 ~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~--~~~~~~fi~DPdG~~IEl~e~~~~~~~~  181 (185)
T PLN03042        120 RGFGHIGITVDDVYKACERFEKLGVEFVKKPDDG--KMKGLAFIKDPDGYWIEIFDLKRIGGIT  181 (185)
T ss_pred             CCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccC--CceeEEEEECCCCCEEEEEECCCchhhc
Confidence            4789999999999999999999999998655322  2257789999999999999999977553

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.17  E-value=6.6e-11  Score=82.66  Aligned_cols=57  Identities=18%  Similarity=0.289  Sum_probs=45.3

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEE--EcCCCCEEEEEe
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFF--HDPDGSMIEICN   78 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf--~DPDGn~IEI~e   78 (137)
                      ..+..|+||.|+|+++++++|+++|+++.......+.+|.+.+|+  +||||++|||.+
T Consensus        70 ~~g~~~i~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        70 GGGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             CCceEEEEEEcCCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            346779999999999999999999999986421222234577888  799999999974

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.15  E-value=3.3e-10  Score=77.17  Aligned_cols=55  Identities=15%  Similarity=0.276  Sum_probs=46.5

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      ..+..|++|.|+|+++++++|+++|+++...+.... . .+.+||+|||||.|||++
T Consensus        65 ~~~~~~~~~~v~di~~~~~~l~~~g~~~~~~~~~~~-~-~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          65 PGGTPGLVLATDDIDATYEELKARGVEFSEEPREMP-Y-GTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             CCCceEEEEEehHHHHHHHHHHhCCCEEeeccccCC-C-ceEEEEECCCCCEEEEeC
Confidence            346779999999999999999999999997663222 2 489999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.15  E-value=1.6e-10  Score=78.71  Aligned_cols=55  Identities=29%  Similarity=0.556  Sum_probs=45.4

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEE
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC   77 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~   77 (137)
                      ..+..|++|.|+|+++++++|+++|+++...+... .+|.+.+||.|||||+|||+
T Consensus        54 ~~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   54 PGGGFHLCFEVEDVDALYERLKELGAEIVTEPRDD-PWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             SSSEEEEEEEESHHHHHHHHHHHTTSEEEEEEEEE-TTSEEEEEEE-TTS-EEEEE
T ss_pred             CCceeEEEEEEcCHHHHHHHHHHCCCeEeeCCEEc-CCCeEEEEEECCCCCEEEeC
Confidence            44678999999999999999999999988776443 23479999999999999996

...

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.13  E-value=3.7e-10  Score=78.09  Aligned_cols=56  Identities=18%  Similarity=0.277  Sum_probs=47.1

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      +...|++|.|+|+++++++|+++|+++...+... .+|.+.+||.|||||+|||++.
T Consensus        56 ~~~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          56 TVVPDLSIEVDDVDAALARAVAAGFAIVYGPTDE-PWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             CCCCEEEEEeCCHHHHHHHHHhcCCeEecCCccC-CCceEEEEEECCCCCEEEEEEc
Confidence            3457999999999999999999999998765432 3446899999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>PRK06724 hypothetical protein; Provisional

Probab=99.11  E-value=2.6e-10  Score=83.58  Aligned_cols=58  Identities=24%  Similarity=0.316  Sum_probs=47.5

Q ss_pred             CCCceEEEEe---CCHHHHHHHHHHCCcEEeeecccc--CCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQC---ENMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~V---edId~v~~rLke~GI~~~~~~~~~--~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++..|+||.|   +++|+++++|+++|+++...+...  .+.|.+.+||+|||||+||+...+
T Consensus        62 ~g~~h~af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         62 LGPRHICYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             CCceeEEEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            4678999998   689999999999999997665332  234568999999999999997653

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.11  E-value=8.8e-10  Score=77.27  Aligned_cols=56  Identities=7%  Similarity=0.183  Sum_probs=47.5

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      +...|++|.|+|+++++++|+++|+++...+... .+|.+.++|+|||||+|+|.+|
T Consensus        67 ~~~~~~~~~v~d~d~~~~~l~~~G~~v~~~~~~~-~~g~~~~~~~DPdG~~~~l~~~  122 (122)
T cd08355          67 AGTQGVYVVVDDVDAHYERARAAGAEILREPTDT-PYGSREFTARDPEGNLWTFGTY  122 (122)
T ss_pred             CceEEEEEEECCHHHHHHHHHHCCCEEeeCcccc-CCCcEEEEEECCCCCEEEEecC
Confidence            4567999999999999999999999999776432 2446889999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.11  E-value=5.6e-10  Score=76.05  Aligned_cols=55  Identities=16%  Similarity=0.303  Sum_probs=44.6

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcE-EeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKID-YVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~-~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      ++..|++|.++|+++++++|+++|++ +...+.. .+++.+.+||+||||+.||+++
T Consensus        57 ~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~-~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          57 GRGGSVYIEVEDVDALYAELKAKGADLIVYPPED-QPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             CCcEEEEEEeCCHHHHHHHHHHcCCcceecCccC-CCcccEEEEEECCCCCEEEecC
Confidence            35569999999999999999999999 4444322 2344689999999999999975

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.11  E-value=6e-10  Score=78.42  Aligned_cols=55  Identities=11%  Similarity=0.213  Sum_probs=43.2

Q ss_pred             CceEEEEeCCHHHHHHHHHHCCcEEee------eccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           25 DNHISFQCENMAIVERRLKEMKIDYVK------SRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        25 ~~HIAF~VedId~v~~rLke~GI~~~~------~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ..|++|.|+|+++++++|+++|+++..      .......+|.+.+||+|||||+|||.+.
T Consensus        59 ~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          59 PFGCCLRLPDVAALHAEFRAAGLPETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             cceEEEEeCCHHHHHHHHHHhCccccccCCCcccCCcCCCCceeEEEEECCCCCEEEeecC
Confidence            358999999999999999999998641      1111112457999999999999999863

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.09  E-value=5.8e-10  Score=76.95  Aligned_cols=55  Identities=15%  Similarity=0.266  Sum_probs=46.5

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      +...|++|.++|+++++++|+++|+++...+...++ +.+.+||+|||||+||+++
T Consensus        60 ~~~~~~~f~v~di~~~~~~l~~~g~~~~~~~~~~~~-~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          60 PPGWLVYFAVDDVDAAAARVEAAGGKVLVPPTDIPG-VGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             CCeEEEEEEeCCHHHHHHHHHHCCCEEEeCCcccCC-cEEEEEEECCCCCEEEeEC
Confidence            456799999999999999999999999877643332 2589999999999999974

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.07  E-value=5.2e-10  Score=82.42  Aligned_cols=58  Identities=21%  Similarity=0.252  Sum_probs=47.4

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .+..|++|.|+|+++++++|+++|+++...+.+..+.+.+.+||+|||||+|||++..
T Consensus        85 ~g~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  142 (150)
T TIGR00068        85 NGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRK  142 (150)
T ss_pred             CceeEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECC
Confidence            3678999999999999999999999988655222222257889999999999999865

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.07  E-value=6.2e-10  Score=78.21  Aligned_cols=56  Identities=16%  Similarity=0.278  Sum_probs=44.9

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccc-cCCceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVE-EGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~-~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ++.+|+||.|+   ++++++++|+++|+++...+.. ..+. .+.+||+|||||+||+...
T Consensus        60 ~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~-~~~~~~~DPdG~~iE~~~~  119 (122)
T cd07265          60 AGLDFMGFKVLDDADLEKLEARLQAYGVAVERIPAGELPGV-GRRVRFQLPSGHTMELYAD  119 (122)
T ss_pred             CCeeEEEEEeCCHHHHHHHHHHHHHCCCcEEEcccCCCCCC-ceEEEEECCCCCEEEEEEe
Confidence            46789999997   7999999999999998764321 1222 3789999999999999854

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.07  E-value=8.2e-10  Score=76.79  Aligned_cols=56  Identities=16%  Similarity=0.337  Sum_probs=43.4

Q ss_pred             CCceEEE--EeCCHHHHHHHHHHCCcEEeeecccc---CCceEEEEEEEcCCCCEEEEEee
Q 032616           24 KDNHISF--QCENMAIVERRLKEMKIDYVKSRVEE---GGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF--~VedId~v~~rLke~GI~~~~~~~~~---~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      +..|++|  .++|+++++++|+++|+++...+...   ...+.+.+||+|||||+|||..+
T Consensus        65 ~~~h~~~~~~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  125 (125)
T cd08357          65 PVPHFGLILSEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKAF  125 (125)
T ss_pred             CCceEEEEEeHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEeeC
Confidence            4568765  56799999999999999998655321   11225899999999999999764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.07  E-value=5.2e-10  Score=80.84  Aligned_cols=55  Identities=22%  Similarity=0.381  Sum_probs=44.6

Q ss_pred             CCceEEEEeC--CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           24 KDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF~Ve--dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      +.+|+||.|+  ++++++++|++.|+++........+. .+++||+|||||.|||...
T Consensus        66 ~~~Hiaf~v~~~~ld~~~~~l~~~gv~~~~~~~~~~~~-g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          66 TYNHIAFKISDSDVDEYTERIKALGVEMKPPRPRVQGE-GRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             CceEEEEEcCHHHHHHHHHHHHHCCCEEecCCccccCC-ceEEEEECCCCCEEEEecC
Confidence            5789999998  79999999999999987543212222 4899999999999999853

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.07  E-value=1.8e-09  Score=75.84  Aligned_cols=57  Identities=30%  Similarity=0.503  Sum_probs=46.1

Q ss_pred             CCCCceEEEEeC---CHHHHHHHHHHCCcEEeeecccc--CCceEEEEEEEcCCCCEEEEEe
Q 032616           22 NPKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        22 np~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~--~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      .++..|+||.|+   |+++++++|+++|+++...+...  ...+.+.+||+|||||+|||+.
T Consensus        66 ~~g~~hia~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~  127 (128)
T cd07242          66 NPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVA  127 (128)
T ss_pred             CcCeeEEEEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEe
Confidence            446789999997   58999999999999999865421  1123689999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.07  E-value=1.1e-09  Score=76.40  Aligned_cols=56  Identities=23%  Similarity=0.306  Sum_probs=46.5

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      +..-|++|.|+|+++++++++++|+++...+.. ..+|.+.+||+|||||.+||.++
T Consensus        70 ~~~~~~~~~v~di~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          70 PAGFEIAFVTDDVAAAFARAVEAGAVLVSEPKE-KPWGQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             CCcEEEEEEcCCHHHHHHHHHHcCCEeccCCcc-CCCCcEEEEEECCCCCEEEEecC
Confidence            345699999999999999999999999876532 23456889999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.06  E-value=1.6e-09  Score=74.79  Aligned_cols=55  Identities=13%  Similarity=-0.048  Sum_probs=46.9

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      +...|++|.|+|++++++++.++|+++...+.. ..+|.+.++|+|||||+|||++
T Consensus        67 ~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          67 GTPVSLHLYVEDVDATFARAVAAGATSVMPPAD-QFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHCCCeEecCccc-ccccceEEEEECCCCCEEEEec
Confidence            346799999999999999999999999877642 2345789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.06  E-value=7.4e-10  Score=78.22  Aligned_cols=53  Identities=15%  Similarity=0.135  Sum_probs=43.8

Q ss_pred             CCceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           24 KDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        24 ~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      +..|++|.|+   ++++++++++++|+++..++...++  .+.+||+|||||.|||+.
T Consensus        68 ~~~~l~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          68 TEVLISLSADSREEVDELVEKALAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHHHCCCcccCCcccCCc--eEEEEEECCCCCEEEEEE
Confidence            4569999998   5889999999999999876543332  478999999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.05  E-value=7.9e-10  Score=78.32  Aligned_cols=56  Identities=25%  Similarity=0.417  Sum_probs=45.7

Q ss_pred             CCceEEEEeC--CHHHHHHHHHHCCcEEeeecccc------CCceEEEEEEEcCCCCEEEEEee
Q 032616           24 KDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEE------GGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF~Ve--dId~v~~rLke~GI~~~~~~~~~------~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      +..|++|.++  |+++++++|+++|+++...+...      ...+.+.+||+|||||.|||++.
T Consensus        58 ~~~h~a~~v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          58 PPQHYAFLVSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             CcceEEEEeCHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence            4689999997  69999999999999987654221      12346999999999999999976

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.05  E-value=7.5e-10  Score=81.86  Aligned_cols=58  Identities=19%  Similarity=0.213  Sum_probs=44.8

Q ss_pred             CCCCceEEEEeCCHHH---HHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~VedId~---v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .++.+|+||.|+|+++   +.++|+++|+++...+...+-.+.+++||+|||||+|||...
T Consensus        65 ~~~~~Hiaf~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          65 DGKLHHFSFFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             CCCceEEEEEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            3578899999999887   568999999998765432110124789999999999999763

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.04  E-value=1.3e-09  Score=82.25  Aligned_cols=56  Identities=20%  Similarity=0.409  Sum_probs=45.6

Q ss_pred             CCCCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ..+.+|+||.|+|   +++++++|+++|+++.. +... +. .+++||+|||||+|||+.+.
T Consensus        63 ~~~l~Hiaf~v~d~~dvd~~~~~L~~~Gv~~~~-~~~~-~~-~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          63 AGTVHHVAFRVPDDEELEAWKERLEALGLPVSG-IVDR-FY-FKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CCceEEEEEECCCHHHHHHHHHHHHHCCCCccc-cccc-cc-EEEEEEECCCCcEEEEEECC
Confidence            3467899999998   99999999999998653 2222 22 58999999999999999864

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.03  E-value=8.8e-10  Score=82.17  Aligned_cols=57  Identities=18%  Similarity=0.162  Sum_probs=45.4

Q ss_pred             CCCCceEEEEeCCHHHHH---HHHHHCCcEEeeeccccC-CceEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCENMAIVE---RRLKEMKIDYVKSRVEEG-GINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~VedId~v~---~rLke~GI~~~~~~~~~~-g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .++.+|+||.|+|++++.   ++|+++|+++...+.... +. ..++||+|||||.|||...
T Consensus        65 ~~g~~Hiaf~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~-~~~~y~~DPdG~~iEl~~~  125 (153)
T cd07257          65 ESGVHHAAFEVHDFDAQGLGHDYLREKGYEHVWGVGRHILGS-QIFDYWFDPWGFIVEHYTD  125 (153)
T ss_pred             CCceeEEEEEcCCHHHHHHHHHHHHHCCCcEeecCCccCCCC-CEEEEEECCCCCEEEEEcC
Confidence            467899999999999987   999999999875542211 21 3578999999999999854

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.01  E-value=3.4e-09  Score=73.29  Aligned_cols=55  Identities=11%  Similarity=0.257  Sum_probs=45.5

Q ss_pred             CCCCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           22 NPKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        22 np~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      .++..|++|.+++   ++++++++++.|+++...+.. .++| +.+||+|||||+|||+.
T Consensus        57 ~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~v~~~~~~-~~~g-~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          57 TGGGSELAFMVDDGAAVDALYAEWQAKGVKIIQEPTE-MDFG-YTFVALDPDGHRLRVFA  114 (114)
T ss_pred             CCCceEEEEEcCCHHHHHHHHHHHHHCCCeEecCccc-cCCc-cEEEEECCCCCEEEeeC
Confidence            4567899999985   889999999999999876643 2344 68999999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.00  E-value=2e-09  Score=74.31  Aligned_cols=53  Identities=23%  Similarity=0.388  Sum_probs=43.4

Q ss_pred             CCCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEE
Q 032616           22 NPKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC   77 (137)
Q Consensus        22 np~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~   77 (137)
                      ..+..|+||.|+   ++++++++++++|+++...... .+  .+.+||+|||||+|||.
T Consensus        71 ~~~~~hi~f~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~--~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          71 PGQIHHIAFSVPSEASLDAWRERLRAAGVPVSGVVDH-FG--ERSIYFEDPDGLRLELT  126 (126)
T ss_pred             CCcEEEEEEEcCCHHHHHHHHHHHHHcCCcccceEee-cc--eEEEEEECCCCCEEEeC
Confidence            345789999998   5799999999999998764322 23  58999999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=98.99  E-value=1.6e-09  Score=78.83  Aligned_cols=57  Identities=26%  Similarity=0.464  Sum_probs=46.9

Q ss_pred             CCCceEEEEeC--CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~Ve--dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .+.+|++|.++  |+++++++|+++|+++...+.... .+.+.+||+|||||+|||++..
T Consensus        62 ~~~~hiaf~v~~~dv~~~~~~l~~~G~~i~~~~~~~~-~~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         62 QSYTHIAFSIEEEDFDHWYQRLKENDVNILPGRERDE-RDKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             CCeeEEEEEecHHHHHHHHHHHHHCCceEcCCccccC-CCceEEEEECCCCCEEEEEeCC
Confidence            35789999998  999999999999999876543222 2358999999999999998754

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=98.98  E-value=1.8e-09  Score=78.03  Aligned_cols=56  Identities=14%  Similarity=0.080  Sum_probs=43.6

Q ss_pred             CCCceEEEEeCCHHHHH---HHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           23 PKDNHISFQCENMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        23 p~~~HIAF~VedId~v~---~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      .+.+|+||.|+|++++.   ++|+++|+++...+......+.+++||+|||||+||+..
T Consensus        61 ~g~~hiaf~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~  119 (134)
T cd08360          61 AGFHHAAFEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGA  119 (134)
T ss_pred             CcceEEEEEeCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEc
Confidence            57899999999988777   599999999875432211112467999999999999985

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.97  E-value=4.5e-09  Score=72.73  Aligned_cols=54  Identities=22%  Similarity=0.367  Sum_probs=44.6

Q ss_pred             CCCceEEEEeC--CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           23 PKDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        23 p~~~HIAF~Ve--dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      .+..|++|.++  |+++++++|+++|+++......  ..+.+.+||+|||||.||+++
T Consensus        66 ~~~~~~~~~v~~~dl~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~~DP~G~~ie~~~  121 (122)
T cd08354          66 SGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQW--PRGGRSLYFRDPDGNLLELAT  121 (122)
T ss_pred             CCccEEEEEcCHHHHHHHHHHHHhcCCceeccccC--CCCeeEEEEECCCCCEEEEec
Confidence            36789999994  8999999999999998765431  223589999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=98.97  E-value=4.4e-09  Score=69.21  Aligned_cols=55  Identities=24%  Similarity=0.439  Sum_probs=45.8

Q ss_pred             CCCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEE
Q 032616           21 INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI   76 (137)
Q Consensus        21 inp~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI   76 (137)
                      ..++..|++|.|+|+++++++|+++|+.+...+.. ...+.+.+|+.||+|+.+||
T Consensus        58 ~~~~~~~~~~~v~~~~~~~~~l~~~g~~~~~~~~~-~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          58 SGGGGVHLAFEVDDVDAAYERLKAAGVEVLGEPRE-EPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             cCCCeeEEEEECCCHHHHHHHHHHcCCcccCCCcC-CCCCcEEEEEECCCCcEEeC
Confidence            35567899999999999999999999999876531 12236899999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=98.96  E-value=1.7e-09  Score=78.24  Aligned_cols=58  Identities=26%  Similarity=0.485  Sum_probs=46.9

Q ss_pred             CCCCceEEEEeCC--HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCEN--MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~Ved--Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ..+.+|+||.+++  +++++++|++.|+++...+....+ +.+.+||.|||||+|||.+.+
T Consensus        57 ~~~~~hiaf~v~~~dld~~~~~l~~~G~~~~~~~~~~~~-~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          57 RQSYTHIAFTIEDSEFDAFYTRLKEAGVNILPGRKRDVR-DRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             CccceEEEEEecHHHHHHHHHHHHHcCCcccCCCccccC-cceEEEEECCCCCEEEEecCc
Confidence            3467899999984  999999999999998754432212 258999999999999999865

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=98.96  E-value=1.7e-09  Score=74.33  Aligned_cols=55  Identities=27%  Similarity=0.517  Sum_probs=44.1

Q ss_pred             CCCceEEEEeC--CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           23 PKDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        23 p~~~HIAF~Ve--dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      .+.+|++|.|+  ++++++++|+++|+++........+ +.+.+||+|||||+|||+.
T Consensus        54 ~~~~hiaf~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEi~~  110 (113)
T cd08345          54 RTYTHIAFQIQSEEFDEYTERLKALGVEMKPERPRVQG-EGRSIYFYDPDGHLLELHA  110 (113)
T ss_pred             CCccEEEEEcCHHHHHHHHHHHHHcCCccCCCccccCC-CceEEEEECCCCCEEEEEe
Confidence            35789999995  7999999999999998754322221 2489999999999999984

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=98.95  E-value=4.2e-09  Score=73.62  Aligned_cols=53  Identities=17%  Similarity=0.290  Sum_probs=43.9

Q ss_pred             CCceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEE
Q 032616           24 KDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC   77 (137)
Q Consensus        24 ~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~   77 (137)
                      +..|++|.+.   |+++++++|+++|+++...+.. ..+|.+.+||+|||||+|||+
T Consensus        66 ~~~~l~~~~~~~~dvd~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          66 HRIALAFLCETPAEVDALYAELVGAGYPGHKEPWD-APWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             CcEEEEEEcCCHHHHHHHHHHHHHCCCCcCCCCcc-CCCCCEEEEEECCCCCEEEEe
Confidence            4568999875   8999999999999998866532 334568899999999999996

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>PLN02300 lactoylglutathione lyase

Probab=98.94  E-value=3.8e-09  Score=86.11  Aligned_cols=63  Identities=21%  Similarity=0.200  Sum_probs=50.7

Q ss_pred             CCCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCCC
Q 032616           21 INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLP   83 (137)
Q Consensus        21 inp~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~p   83 (137)
                      .+++..|+||.|+|+++++++|+++|+++...+....+.+.+.+||+|||||+|||++...-|
T Consensus        90 ~~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~  152 (286)
T PLN02300         90 IGTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTP  152 (286)
T ss_pred             cCCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCC
Confidence            455788999999999999999999999988765332221257889999999999999875443

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=98.94  E-value=3.1e-09  Score=73.74  Aligned_cols=58  Identities=22%  Similarity=0.368  Sum_probs=43.3

Q ss_pred             CCCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCC--CCEEEEEe
Q 032616           21 INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPD--GSMIEICN   78 (137)
Q Consensus        21 inp~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPD--Gn~IEI~e   78 (137)
                      ..++..|++|.|+|+++++++|+++|+++...+......|.+.+|+.|||  |++|||++
T Consensus        69 ~~~g~~h~~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          69 RGEGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             CCCceEEEEEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            35678899999999999999999999999876531222223444444445  99999974

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=98.94  E-value=3.9e-09  Score=75.65  Aligned_cols=59  Identities=27%  Similarity=0.378  Sum_probs=46.1

Q ss_pred             CCCCceEEEEeCCHH---HHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCENMA---IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~VedId---~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .++..|++|.|+|++   +++++|+++|+++...+...+..+.+++||+|||||+|||.+..
T Consensus        57 ~~~~~hl~~~v~d~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~  118 (131)
T cd08343          57 RPGLHHVAFEVESLDDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEM  118 (131)
T ss_pred             CCCeeEEEEEcCCHHHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCC
Confidence            457889999999875   78899999999998755322211247899999999999998643

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.93  E-value=9e-09  Score=71.86  Aligned_cols=56  Identities=27%  Similarity=0.360  Sum_probs=44.4

Q ss_pred             CCCCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           21 INPKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        21 inp~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ..++..|++|.|+   ++++++++|+++|+++.... . .+. .+.+||+|||||+|||...
T Consensus        61 ~~~~~~hi~f~v~~~~~v~~~~~~l~~~g~~~~~~~-~-~~~-~~~~~~~DPdG~~iEi~~~  119 (125)
T cd07255          61 GATGLYHFAILLPSRADLAAALRRLIELGIPLVGAS-D-HLV-SEALYLSDPEGNGIEIYAD  119 (125)
T ss_pred             CCCcEEEEEEECCCHHHHHHHHHHHHHcCCceeccc-c-ccc-eeEEEEECCCCCEEEEEEe
Confidence            3456789999997   48999999999999886532 2 233 3789999999999999743

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=98.93  E-value=3.2e-09  Score=78.66  Aligned_cols=58  Identities=26%  Similarity=0.374  Sum_probs=44.8

Q ss_pred             CCCCceEEEEeCCHHHHH---HHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCENMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~VedId~v~---~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .++.+|++|.|+|++++.   ++|+++|+++...+...+..+.+.+||+|||||+|||++.
T Consensus        57 ~~~~~hiaf~v~d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~  117 (144)
T cd07239          57 HPSLNHVAFEMPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSE  117 (144)
T ss_pred             CCceEEEEEECCCHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccC
Confidence            357889999999888775   8999999999865422111113678999999999999875

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=98.93  E-value=4.6e-09  Score=73.50  Aligned_cols=54  Identities=19%  Similarity=0.246  Sum_probs=44.5

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      ++..|++|.|+|.+++.+.+++.|+.+.......++  .+++||.|||||.|||..
T Consensus        56 ~~~~~~af~v~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~DPdG~~iEl~~  109 (113)
T cd07267          56 ARFVGAAFEAASRADLEKAAALPGASVIDDLEAPGG--GKRVTLTDPDGFPVELVY  109 (113)
T ss_pred             CcccEEEEEECCHHHHHHHHHcCCCeeecCCCCCCC--ceEEEEECCCCCEEEEEe
Confidence            467899999999999999999999988754321122  479999999999999974

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.92  E-value=4.9e-09  Score=73.36  Aligned_cols=54  Identities=17%  Similarity=0.196  Sum_probs=43.5

Q ss_pred             CCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccC--CceEEEEEEEcCCCCEEEEE
Q 032616           24 KDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEG--GINVDQLFFHDPDGSMIEIC   77 (137)
Q Consensus        24 ~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~--g~g~r~vFf~DPDGn~IEI~   77 (137)
                      +..|+||.|++   +++++++++++|+++...+....  +.+.+.+||+|||||.|||+
T Consensus        64 ~~~hi~f~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          64 NGTHVAFAAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CceEEEEECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            45799999986   78899999999999886653321  23357899999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=98.92  E-value=4.8e-09  Score=77.87  Aligned_cols=58  Identities=19%  Similarity=0.271  Sum_probs=44.8

Q ss_pred             CCCCceEEEEeCCH---HHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCENM---AIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~VedI---d~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .++.+|+||.|+|+   ++++++|+++|+++...+......+.+.+||+||||++||+...
T Consensus        54 ~~gl~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  114 (141)
T cd07258          54 SSHFHHVNFMVTDIDDIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFG  114 (141)
T ss_pred             CCceEEEEEECCCHHHHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeC
Confidence            45789999999865   56799999999998765432111124789999999999999753

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=98.92  E-value=4.6e-09  Score=75.07  Aligned_cols=57  Identities=19%  Similarity=0.316  Sum_probs=44.3

Q ss_pred             CCCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccC--CceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEG--GINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~--g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ++..|+||+|++   +++++++|+++|+++...+....  ..+.+++||+|||||.||+...
T Consensus        58 ~~~~~iaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~  119 (124)
T cd08361          58 PAEQASGFELRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVR  119 (124)
T ss_pred             CceEEEEEEECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEe
Confidence            566899999985   99999999999999876442111  1124678999999999999744

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.91  E-value=3.8e-09  Score=74.52  Aligned_cols=53  Identities=13%  Similarity=0.297  Sum_probs=42.2

Q ss_pred             CceEEEEeCCHHHHHHHHHHCCcEEeee-----ccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           25 DNHISFQCENMAIVERRLKEMKIDYVKS-----RVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        25 ~~HIAF~VedId~v~~rLke~GI~~~~~-----~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      ..|++|.|+|+++++++|+++|+++...     +.. ..+|.+.+||+|||||+|+|.+
T Consensus        56 ~~~~~~~v~did~~~~~l~~~G~~~~~~~~~~~~~~-~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          56 NSMLHLEVDDLEAYYEHIKALGLPKKFPGVKLPPIT-QPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             CCEEEEEECCHHHHHHHHHHcCCcccccceecCccc-cCCCcEEEEEECCCccEEEeeC
Confidence            4589999999999999999999975321     111 1244699999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=98.91  E-value=4.7e-09  Score=72.84  Aligned_cols=58  Identities=17%  Similarity=0.229  Sum_probs=45.6

Q ss_pred             CCCCceEEEEe---CCHHHHHHHHHHCCcEEeeeccc-cCCceEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQC---ENMAIVERRLKEMKIDYVKSRVE-EGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~V---edId~v~~rLke~GI~~~~~~~~-~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      +++..|++|.|   +++++++++|+++|+++...+.. ...++.+.+||+|||||.|||+..
T Consensus        56 ~~~~~~~~~~v~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  117 (120)
T cd08362          56 RNRLDVVSFSVASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSAD  117 (120)
T ss_pred             CCCCceEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEec
Confidence            34678999999   47999999999999998865421 112235789999999999999864

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.90  E-value=7e-09  Score=72.45  Aligned_cols=57  Identities=21%  Similarity=0.263  Sum_probs=45.4

Q ss_pred             CCCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccC-CceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEG-GINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~-g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ++..|++|.+++   +++++++|+++|+++...+.... +...+++||+|||||+|||+..
T Consensus        57 ~~~~h~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  117 (120)
T cd07254          57 GGLNHLGVQVDSAEEVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVT  117 (120)
T ss_pred             CCeeEEEEEeCCHHHHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEe
Confidence            578899999987   88999999999999886542111 1114789999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=98.90  E-value=4.2e-09  Score=78.57  Aligned_cols=57  Identities=12%  Similarity=0.148  Sum_probs=44.6

Q ss_pred             CCCceEEEEeCCHH---HHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCENMA---IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~VedId---~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ++.+|+||.|+|++   +++++|+++|+++...+...+..+.+++||+|||||+||+..-
T Consensus        72 ~g~~Hiaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~  131 (154)
T cd07237          72 KRIHHLMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWG  131 (154)
T ss_pred             ceeEEEEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccC
Confidence            57889999998755   6899999999999865422111235899999999999999743

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=98.90  E-value=3.7e-09  Score=73.81  Aligned_cols=55  Identities=25%  Similarity=0.283  Sum_probs=43.9

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeeecc-ccCCceEEEEEEEcCCCCEEEEEe
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~-~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      ++..|++|.|.   ++++++++|+++|+++...+. ...+. .+.+||.|||||+||++.
T Consensus        59 ~~~~hi~~~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~-~~~~~~~DPdG~~ve~~~  117 (121)
T cd07266          59 AGLGHIAFRVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQ-GRALRVEDPLGFPIEFYA  117 (121)
T ss_pred             CceeEEEEECCCHHHHHHHHHHHHHcCCCcccccCCcCCCC-ccEEEEECCCCCEEEEEe
Confidence            47889999994   799999999999999876422 12222 378999999999999984

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=98.87  E-value=6e-09  Score=73.25  Aligned_cols=55  Identities=16%  Similarity=0.186  Sum_probs=42.9

Q ss_pred             CCCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           22 NPKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        22 np~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      .++.+|+||.++   ++++++++|+++|+++...... .+. .+.+||+|||||+||+..
T Consensus        60 ~~~~~h~af~v~~~~~v~~~~~~l~~~G~~~~~~~~~-~~~-~~~~~~~DPdG~~iEl~~  117 (121)
T cd09013          60 EAGLGHIAWRASSPEALERRVAALEASGLGIGWIEGD-PGH-GKAYRFRSPDGHPMELYW  117 (121)
T ss_pred             CCceEEEEEEcCCHHHHHHHHHHHHHcCCccccccCC-CCC-cceEEEECCCCCEEEEEE
Confidence            357889999997   5889999999999997532211 122 368999999999999984

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=98.87  E-value=2.3e-08  Score=71.04  Aligned_cols=55  Identities=27%  Similarity=0.427  Sum_probs=43.9

Q ss_pred             CCCceEEEEeCCHH---HHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCENMA---IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~VedId---~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++.+|++|.|+|++   +++++|++.|+++..... .++  .+.+||+|||||+|||....
T Consensus        64 ~~~~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~-~~~--~~~~~~~DP~G~~ie~~~~~  121 (134)
T cd08348          64 AGLNHIAFEVDSLDDLRDLYERLRAAGITPVWPVD-HGN--AWSIYFRDPDGNRLELFVDT  121 (134)
T ss_pred             CCceEEEEEeCCHHHHHHHHHHHHHCCCCccccCC-CCc--eeEEEEECCCCCEEEEEEcC
Confidence            46789999999765   577999999999886542 222  47899999999999998543

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=98.85  E-value=1.7e-08  Score=71.33  Aligned_cols=56  Identities=20%  Similarity=0.303  Sum_probs=44.7

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccc---cCCceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVE---EGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~---~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ++..|++|.++   |+++++++|+++|+++...+..   ..+. .+.+||+|||||.||+...
T Consensus        56 ~~~~~~~f~v~~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~-~~~~~~~DPdG~~iE~~~~  117 (120)
T cd07252          56 DDLAYAGWEVADEAALDALAARLRAAGVAVEEGSAELAAERGV-EGLIRFADPDGNRHELFWG  117 (120)
T ss_pred             CceeEEEEEECCHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCC-cEEEEEECCCCCEEEEEec
Confidence            46789999997   4999999999999999864421   1222 3799999999999999864

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=98.84  E-value=6.8e-09  Score=73.30  Aligned_cols=53  Identities=26%  Similarity=0.521  Sum_probs=43.6

Q ss_pred             CCCceEEEEe--CCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQC--ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~V--edId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ++..|++|.+  +++++++++|+++|+++...+. ..+   +.+||.|||||.|||+.-
T Consensus        56 ~~~~hi~f~v~~~dl~~~~~~l~~~G~~~~~~~~-~~~---~~~~f~DPdG~~ie~~~~  110 (121)
T cd07244          56 KDYTHYAFSVSEEDFASLKEKLRQAGVKEWKENT-SEG---DSFYFLDPDGHKLELHVG  110 (121)
T ss_pred             CCeeeEEEEeCHHHHHHHHHHHHHcCCcccCCCC-CCc---cEEEEECCCCCEEEEEeC
Confidence            4578999999  4799999999999999875432 223   699999999999999853

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=98.83  E-value=1e-08  Score=71.52  Aligned_cols=52  Identities=21%  Similarity=0.404  Sum_probs=40.7

Q ss_pred             CceEEE--EeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           25 DNHISF--QCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        25 ~~HIAF--~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ..|++|  .++|+++++++|+++|+++...+.. .+  .+.+||.|||||.|||...
T Consensus        56 ~~~~~~~~~~~d~~~~~~~l~~~Gi~~~~~~~~-~~--~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          56 LAYLSFGIFEDDFAAFARHLEAAGVALAAAPPG-AD--PDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             eeeEEEEeEhhhHHHHHHHHHHcCCceecCCCc-CC--CCEEEEECCCCCEEEEecC
Confidence            455544  5589999999999999998865422 22  4689999999999999854

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=98.83  E-value=1.5e-08  Score=69.59  Aligned_cols=56  Identities=21%  Similarity=0.376  Sum_probs=45.7

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ++..|++|.|+   ++++++++|+++|+++...+....+ +.+.+||.|||||++|+...
T Consensus        56 ~~~~h~~~~v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~-~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          56 PGVDALGFEVASEEDLEALAAHLEAAGVAPEEASDPEPG-VGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CCceeEEEEcCCHHHHHHHHHHHHHcCCceEEcCccCCC-CceEEEEECCCCCEEEEEEc
Confidence            46789999997   6899999999999999876532222 24899999999999999843

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=98.82  E-value=1.3e-08  Score=76.38  Aligned_cols=59  Identities=25%  Similarity=0.329  Sum_probs=43.1

Q ss_pred             CCCCceEEEEeCC---HHHHHHHHHHCCcEEe--eeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCEN---MAIVERRLKEMKIDYV--KSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~Ved---Id~v~~rLke~GI~~~--~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .++.+|+||.|+|   +++++++|+++|+...  ..+...+..+.+++||+|||||+||+....
T Consensus        61 ~~~~~Hiaf~v~~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          61 GPRLHHVAFWVPEPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CCceeEEEEEcCCHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            4578899999986   7778899999998632  222111112247899999999999998644

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.80  E-value=3.3e-08  Score=68.12  Aligned_cols=54  Identities=20%  Similarity=0.242  Sum_probs=42.1

Q ss_pred             CCceEEEEe---CCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           24 KDNHISFQC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        24 ~~~HIAF~V---edId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      +..|++|.+   +|+++++++|++.|+++...+... .+|.+.+||+|||||+|||..
T Consensus        64 ~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          64 SGITLAHNVRSEEEVDAVLARAAAAGATIVKPPQDV-FWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             cceEEEEEcCCHHHHHHHHHHHHhCCCEEecCCccC-CCCceEEEEECCCCCEEEEee
Confidence            345677665   589999999999999998654322 233589999999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=98.76  E-value=2.2e-08  Score=81.29  Aligned_cols=61  Identities=16%  Similarity=0.237  Sum_probs=45.3

Q ss_pred             CceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCCCCcc
Q 032616           25 DNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVP   86 (137)
Q Consensus        25 ~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~p~~p   86 (137)
                      .+|+||.|+|   +++++++|+++|+++...+...+..+.+++||+|||||+||+. ++...+.|
T Consensus       208 ~~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~-~~~~~~~~  271 (303)
T TIGR03211       208 LHHVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETF-GGGYLAYP  271 (303)
T ss_pred             eEEEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEe-cCCeeecC
Confidence            8899999997   4556789999999987655322211247999999999999998 55544443

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=98.75  E-value=2.7e-08  Score=75.29  Aligned_cols=58  Identities=14%  Similarity=0.158  Sum_probs=44.0

Q ss_pred             CCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +.+|+||+|+|   +++++++|+++|+++...+...+......+||+|||||+|||.+...
T Consensus        69 ~~~hiaf~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~  129 (166)
T cd09014          69 RLHHLAYALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGGGG  129 (166)
T ss_pred             CceEEEEECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEcCC
Confidence            57899999986   55788999999999865443222112356999999999999998733

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=98.72  E-value=4e-08  Score=67.38  Aligned_cols=53  Identities=26%  Similarity=0.382  Sum_probs=40.4

Q ss_pred             CCceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEE
Q 032616           24 KDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI   76 (137)
Q Consensus        24 ~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI   76 (137)
                      ...|++|.+.   |+++++++|++.|+++...+......+...+||+|||||+|||
T Consensus        73 ~~~~i~~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   73 GGHHIAFLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             TSEEEEEEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             cceeEEEEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            4567777775   6888999999999999987643222224556899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>PLN02300 lactoylglutathione lyase

Probab=98.67  E-value=7.4e-08  Score=78.54  Aligned_cols=60  Identities=15%  Similarity=0.082  Sum_probs=50.2

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      .++..|++|.|+|+++++++++++|+++...+....+.+.+.++|+||||+.++|.+...
T Consensus       221 g~~~~~i~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~  280 (286)
T PLN02300        221 GNAYAQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNID  280 (286)
T ss_pred             CCceeEEEEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccch
Confidence            356789999999999999999999999998654333333579999999999999998665

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=98.66  E-value=6.3e-08  Score=77.99  Aligned_cols=57  Identities=23%  Similarity=0.364  Sum_probs=42.3

Q ss_pred             CCCCceEEEEeCCH---HHHHHHHHHCCcE--EeeeccccCCc-eEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCENM---AIVERRLKEMKID--YVKSRVEEGGI-NVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~VedI---d~v~~rLke~GI~--~~~~~~~~~g~-g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .++.+|+||.|+|.   +++.++|+++|++  +...+.. .+. +..++||+|||||+||+...
T Consensus       194 ~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~-~~~~~~~~~y~~DP~G~~iEl~~~  256 (294)
T TIGR02295       194 GPRLHHIAYWVHDPLNIIKACDILASAGLSDSIERGPGR-HGVSNAFFLYLRDPDGHRIELYTG  256 (294)
T ss_pred             CCceeeEEEEcCCHHHHHHHHHHHHhCCCCcccccCCcc-CCCCcceEEEEECCCCCEEEEEec
Confidence            36789999999984   4568999999997  4433321 121 13679999999999999863

The enzyme from Bacillus brevis contains manganese.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=98.65  E-value=9.4e-08  Score=77.28  Aligned_cols=56  Identities=13%  Similarity=0.154  Sum_probs=42.5

Q ss_pred             CCCCceEEEEeCCHHH---HHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           22 NPKDNHISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        22 np~~~HIAF~VedId~---v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      .++.+|+||+|+|+++   ++++|+++|+.+...... +..+.+++||+||||++||+..
T Consensus       204 ~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~~r~-~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       204 EKRLNHLMLEVDTLDDVGLALDRVDADGIVASTLGRH-TNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             CCceEEEEEEcCCHHHHHHHHHHHHHCCCEEecCCcC-CCCCeEEEEEECCCCcEEEeec
Confidence            4578999999998776   799999999943322211 1123589999999999999976

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=98.61  E-value=1.3e-07  Score=76.08  Aligned_cols=55  Identities=18%  Similarity=0.158  Sum_probs=45.7

Q ss_pred             CCCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .++..|++|.|+   |+++++++|+++|+++.....+ ++  .+.+||+|||||.|||+..
T Consensus        58 ~~~~~hiaf~v~~~~dl~~~~~~l~~~Gv~v~~~~~~-~~--~~~~~~~DPdG~~iEl~~~  115 (294)
T TIGR02295        58 SAALSYIGFRVSKEEDLDKAADFFQKLGHPVRLVRDG-GQ--PEALRVEDPFGYPIEFYFE  115 (294)
T ss_pred             CcCccEEEEEeCCHHHHHHHHHHHHhcCCcEEeecCC-CC--ceEEEEECCCCCEEEEEEc
Confidence            356889999997   7899999999999998865422 22  4899999999999999863

The enzyme from Bacillus brevis contains manganese.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=98.55  E-value=2.5e-07  Score=75.12  Aligned_cols=58  Identities=19%  Similarity=0.306  Sum_probs=46.1

Q ss_pred             CCCCceEEEEeC---CHHHHHHHHHHCCcEEeeecc-ccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCE---NMAIVERRLKEMKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~-~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .++.+|+||.|+   ++++++++|+++|+++...+. ...+. .+.+||+|||||+|||....
T Consensus        58 ~~g~~hiaf~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~-g~~~~~~DPdG~~iEl~~~~  119 (303)
T TIGR03211        58 TAGLDHMAFKVESEADLERLVKRLEAYGVGTGWIPAGELPGV-GRRVRFTLPSGHTMELYAEK  119 (303)
T ss_pred             CCceeEEEEEeCCHHHHHHHHHHHHHcCCCeeeccCCCCCCc-ceEEEEECCCCCEEEEEEcc
Confidence            346889999998   799999999999999876432 11222 37899999999999999754

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=98.46  E-value=5.7e-07  Score=72.73  Aligned_cols=55  Identities=18%  Similarity=0.327  Sum_probs=44.6

Q ss_pred             CCCceEEEEeCC---HHHHHHHHHHCCcEEeeeccc---cCCceEEEEEEEcCCCCEEEEEe
Q 032616           23 PKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVE---EGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        23 p~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~---~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      .+..|++|.|++   +++++++|+++|+++...+..   ..+ +.+.+||.|||||.||+..
T Consensus        57 ~~~~~~~f~V~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~-~~~~~~f~DPdGn~lEl~~  117 (286)
T TIGR03213        57 DDLAYAGWEVADEAGLDQVKEKLEKAGVAVTVASAAEARERG-VLGLIKFTDPGGNPLEIYY  117 (286)
T ss_pred             CCeeeEeeeeCCHHHHHHHHHHHHHcCCceEECCHHHhhhcc-ceEEEEEECCCCCEEEEEE
Confidence            357899999998   889999999999998865421   122 2478999999999999986

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.38  E-value=1.2e-06  Score=65.00  Aligned_cols=45  Identities=9%  Similarity=0.099  Sum_probs=36.9

Q ss_pred             ceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           26 NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        26 ~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      .|++|.|++. .++++|+++|+++...+.   +    .+|++||||++|||..
T Consensus        82 ~~~hlav~~~-d~~~~l~~~Gv~~~~~~~---~----~~fi~DPDG~~ie~~~  126 (127)
T cd08358          82 DFLGITIHSK-QAVSNAKKHNWPVTEVED---G----VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CEEEEEEECH-HHHHHHHHCCCceecCCC---C----EEEEECCCCCEEEEec
Confidence            4788888887 566999999999886431   2    8899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=97.94  E-value=7.1e-06  Score=57.51  Aligned_cols=50  Identities=16%  Similarity=0.222  Sum_probs=38.1

Q ss_pred             eEEEeecCCCCCCCCCCCCCCCCCceEEEEeCCHHHHHHHHHHCCcEEeeecc
Q 032616            2 GIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRV   54 (137)
Q Consensus         2 ~IHLl~~~~~~~~~~~~~~inp~~~HIAF~VedId~v~~rLke~GI~~~~~~~   54 (137)
                      .|.|++..+......   ...++.+|+||.|+|+++++++|+++|+++.....
T Consensus        49 ~iELi~p~~~~~~~~---~~~~gi~Hia~~v~D~d~~~~~l~~~G~~~~~~~~   98 (109)
T PF13669_consen   49 QIELIQPLDGDSPLD---RGGGGIHHIAFEVDDLDAAIARLEAQGFRVLDEGP   98 (109)
T ss_dssp             EEEEEEESSTTCHHH---HTSSEEEEEEEEESHHHHHHHHHHHTTECEEECEE
T ss_pred             EEEEEEeCCCCcccc---cCCCCEEEEEEEeCCHHHHHHHHHHCCCEEcccCc
Confidence            467777655431110   24668999999999999999999999999987653

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=97.86  E-value=4.7e-05  Score=63.56  Aligned_cols=56  Identities=27%  Similarity=0.356  Sum_probs=45.0

Q ss_pred             CCCCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           21 INPKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        21 inp~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      -..+..|+||.++   |+..+..++.+.|+.+.... +  ......+||.||+||-|||..-
T Consensus        68 ~~aGLyH~AfLlP~r~~L~~~l~hl~~~~~~l~Ga~-D--H~vSEAlYl~DPEGNGIEiYaD  126 (265)
T COG2514          68 RAAGLYHTAFLLPTREDLARVLNHLAEEGIPLVGAS-D--HLVSEALYLEDPEGNGIEIYAD  126 (265)
T ss_pred             cccceeeeeeecCCHHHHHHHHHHHHhcCCcccccC-c--chhheeeeecCCCCCeEEEEec
Confidence            4458899999998   58899999999999997322 1  1225799999999999999753

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=97.45  E-value=0.00069  Score=51.11  Aligned_cols=78  Identities=19%  Similarity=0.210  Sum_probs=52.5

Q ss_pred             eEEEeecCCCCCCCCCCCCCCCCCceEEEE--eCCHHHHHHHHHHCCcEEeeeccc----cCCceEEEEEEEcCCCCEEE
Q 032616            2 GIHLLKSEEPDNLPKAGKNINPKDNHISFQ--CENMAIVERRLKEMKIDYVKSRVE----EGGINVDQLFFHDPDGSMIE   75 (137)
Q Consensus         2 ~IHLl~~~~~~~~~~~~~~inp~~~HIAF~--VedId~v~~rLke~GI~~~~~~~~----~~g~g~r~vFf~DPDGn~IE   75 (137)
                      .+||- .+...+..++...+.--..|++..  ++|--++.++|+++||.+..++.-    +.|. .+.+|+.||.||-+|
T Consensus        48 v~Hl~-~q~~~~~~g~V~~~~v~~pHfGvVl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gE-q~TlFl~DP~gN~lE  125 (138)
T COG3565          48 VAHLT-PQPDSQGSGKVDGHGVPPPHFGVVLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGE-QRTLFLFDPSGNALE  125 (138)
T ss_pred             EEEec-CCcccccCcccCCCCCCCccceEEEEHHHHHHHHHHHHHcCCCcccCceEEecCCccc-eEEEEEECCCCCeee
Confidence            46762 222222333333444456677765  468889999999999999877631    2233 589999999999999


Q ss_pred             EEeecC
Q 032616           76 ICNCDV   81 (137)
Q Consensus        76 I~e~~~   81 (137)
                      +-.+..
T Consensus       126 fK~fR~  131 (138)
T COG3565         126 FKGFRD  131 (138)
T ss_pred             eecccc
Confidence            986643

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=97.44  E-value=0.00038  Score=50.01  Aligned_cols=51  Identities=14%  Similarity=0.019  Sum_probs=39.9

Q ss_pred             CceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEE
Q 032616           25 DNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC   77 (137)
Q Consensus        25 ~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~   77 (137)
                      ..++++.|++   +++++++|++.| ++...+.. ..+|.+..+|+||+|+.++|.
T Consensus        75 ~~~l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~-~~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          75 GISLSVECDSEEEADRLFEALSEGG-TVLMPLQK-TFWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             CEEEEEECCCHHHHHHHHHHHhcCC-eEeccchh-cCcccccEEEECCCCCEEEeC
Confidence            4588999986   778889998877 66655433 346678999999999999983

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=97.31  E-value=0.00013  Score=48.62  Aligned_cols=52  Identities=23%  Similarity=0.426  Sum_probs=39.3

Q ss_pred             CCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           24 KDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        24 ~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      +..|++|.+++   +..........|..+........+   ..+||+||||++|||.+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~---~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          84 GLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGG---VHVYFRDPDGILIELAT  138 (138)
T ss_pred             ccCceeEecccccccceEEEeeCCCCCEEEeecCCCcc---eEEEEECCCCcEEEeeC
Confidence            46899999998   667777777778887654421112   39999999999999963

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=97.17  E-value=0.0025  Score=48.02  Aligned_cols=57  Identities=16%  Similarity=0.170  Sum_probs=46.9

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      +..-++-|.|+|+|+..+|.++.|-++.....+-++. .+.+.|.||+||.+-|++..
T Consensus        70 ~~~~~iy~~v~did~~l~rv~~~GG~V~~p~~~~p~~-G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          70 GGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGG-GRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             CCCEEEEEecCChHHHHHHHHhcCCeEEecccccCCc-eEEEEEECCCCCEEEEeecC
Confidence            3445788889999999999999999999887544433 48999999999999998753

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=97.09  E-value=0.0033  Score=43.85  Aligned_cols=57  Identities=14%  Similarity=0.100  Sum_probs=44.2

Q ss_pred             ceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCC-CEEEEEeecCCC
Q 032616           26 NHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDG-SMIEICNCDVLP   83 (137)
Q Consensus        26 ~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDG-n~IEI~e~~~~p   83 (137)
                      +|++|.|+|+++..+.+.+ .|+......... ..+++..|+..++| ..||++++.+-+
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~-~~~v~~~~~~~~~~~~~iELi~p~~~~   59 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDE-PQGVRVAFLYLGDGPVQIELIQPLDGD   59 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEG-CTTEEEEEEEETTETEEEEEEEESSTT
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecC-CCCEEEEEEEeCCCcEEEEEEEeCCCC
Confidence            5999999999999999998 899876543222 23368889999998 689999976633

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=96.82  E-value=0.0025  Score=48.41  Aligned_cols=53  Identities=23%  Similarity=0.197  Sum_probs=43.7

Q ss_pred             ceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           26 NHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        26 ~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      --+||.+.   ++|++.++..+.|-+...++...++  .+..-|.|||||.+|+.-++
T Consensus        73 vli~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~gf--MYg~~fqDpDGh~wE~l~m~  128 (133)
T COG3607          73 VLISLSAGSREEVDELVDKALEAGGKPANEPQDEGF--MYGRSFQDPDGHVWEFLWMD  128 (133)
T ss_pred             EEEEeccCcHHHHHHHHHHHHHcCCCCCCCcccccc--ccceeeeCCCCCeEEEEEeC
Confidence            46788886   5889999999999999877766555  46788999999999998765

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=96.63  E-value=0.0024  Score=49.75  Aligned_cols=32  Identities=9%  Similarity=0.255  Sum_probs=29.3

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeec
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSR   53 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~   53 (137)
                      .++..||||.|+|+++++++|+++|+++...+
T Consensus        81 G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P  112 (191)
T cd07250          81 GAGVQHIALATDDIFATVAALRARGVEFLPIP  112 (191)
T ss_pred             CCceeEEEEECCCHHHHHHHHHHcCCeeccCc
Confidence            46889999999999999999999999998764

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=96.00  E-value=0.014  Score=49.23  Aligned_cols=34  Identities=15%  Similarity=0.143  Sum_probs=30.2

Q ss_pred             CCCCCceEEEEeCCHHHHHHHHHHCCcEEeeecc
Q 032616           21 INPKDNHISFQCENMAIVERRLKEMKIDYVKSRV   54 (137)
Q Consensus        21 inp~~~HIAF~VedId~v~~rLke~GI~~~~~~~   54 (137)
                      ..++..|+||.|+|+++++++++++|+++...+.
T Consensus        69 hg~gv~~iaf~V~Dv~~a~~~l~~~Ga~~v~~p~  102 (353)
T TIGR01263        69 HGDGVKDVAFRVDDAAAAFEAAVERGAEPVQAPV  102 (353)
T ss_pred             CCCceEEEEEEECCHHHHHHHHHHCCCEeccCCc
Confidence            4578899999999999999999999999987653

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.80  E-value=0.079  Score=40.20  Aligned_cols=58  Identities=14%  Similarity=-0.004  Sum_probs=46.7

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++..--+-+.++|++++++++.+.|+++..+. ....||.+.-.+.||.|+.+-|....
T Consensus        75 ~~~s~~l~~~~~d~da~f~~a~~aGa~v~mpl-~~~fwG~r~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          75 GGTSLSLDLYVEDVDAVFERAAAAGATVVMPL-EDTFWGDRYGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             CCeeEEEEEEehHHHHHHHHHHhcCCeEEecc-hhcCcccceEEEECCCCCEEEEecCc
Confidence            33444667788899999999999998888765 34457789999999999999997654

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=95.79  E-value=0.061  Score=38.27  Aligned_cols=57  Identities=18%  Similarity=0.370  Sum_probs=41.6

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeeccccC----------CceEEEEEEEcCCC-CEEEEEeec
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEG----------GINVDQLFFHDPDG-SMIEICNCD   80 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~----------g~g~r~vFf~DPDG-n~IEI~e~~   80 (137)
                      +.+|++|.|.|+++..+..++.|.++.......+          +.+.+..++..|+| ..||+.++.
T Consensus         3 ~i~Hi~i~v~Dl~~s~~FY~~LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~   70 (142)
T cd08353           3 RMDNVGIVVRDLEAAIAFFLELGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFH   70 (142)
T ss_pred             eeeeEEEEeCCHHHHHHHHHHcCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEec
Confidence            5789999999999999988889988765431110          11256677777766 579999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=95.60  E-value=0.013  Score=49.54  Aligned_cols=58  Identities=16%  Similarity=0.348  Sum_probs=43.5

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccc--c---CCc------------eEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE--E---GGI------------NVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~--~---~g~------------g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .++..||||.|+|+++++++|+++|+++...+..  +   ...            ....+|=.|.+|+++.|.+.
T Consensus       236 g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P~~yY~~l~~r~~~~~~~~~~~l~~~~iL~D~d~~g~llqift~  310 (353)
T TIGR01263       236 GAGVQHIALNTDDIVRTVRALRARGVEFLDTPDTYYDLLGERLGGHVKEDLDTLRELNILIDGDEDGYLLQIFTK  310 (353)
T ss_pred             CCCccEEEEEcCCHHHHHHHHHHcCCccCcCCHHHHHHHHHHhcccccchHHHHHHCCEEEecCCCceEEEEecc
Confidence            4689999999999999999999999999875410  0   000            01245778889988888765

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=95.52  E-value=0.16  Score=34.28  Aligned_cols=60  Identities=12%  Similarity=0.115  Sum_probs=42.2

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCCCC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPV   84 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~p~   84 (137)
                      +++|+++.|.|+++..+..++ .|..+........+. ...+.+..++|..+|+....+.+.
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~-~~~~~~~~~~~~~i~l~~~~~~~~   63 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERG-SYKLDLLLNGGYQLELFSFPNPPE   63 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCC-cEEEEEecCCCcEEEEEEcCCCCC
Confidence            578999999999999999975 799887653222211 123445566788899987665543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=94.90  E-value=0.25  Score=33.50  Aligned_cols=58  Identities=16%  Similarity=0.260  Sum_probs=41.0

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcC---CCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDP---DGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DP---DGn~IEI~e~~~   81 (137)
                      +++|+++.|+|+++..+..++ .|.+........++.+...+++.+.   .|..+++.....
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~   62 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPD   62 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCC
Confidence            468999999999999998876 5998775532111112355667665   677899987654

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=94.37  E-value=0.27  Score=36.85  Aligned_cols=58  Identities=14%  Similarity=0.134  Sum_probs=42.3

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeec---ccc--------------CCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSR---VEE--------------GGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~---~~~--------------~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +.+|+++.|.|+++.++.-++ .|.++..+.   .+.              .+.+.+.+|+..++|..||++++.+
T Consensus         4 ~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~   79 (162)
T TIGR03645         4 TFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKN   79 (162)
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccC
Confidence            578999999999999998876 698775321   000              0112567788878899999999865

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=93.72  E-value=0.37  Score=32.81  Aligned_cols=56  Identities=11%  Similarity=0.068  Sum_probs=40.0

Q ss_pred             CceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           25 DNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        25 ~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ++|++|.|+|++++.+...+ .|.+.........+.+.+..|+.. +|..++|.+...
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~   57 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGL-GNVQIELIEPLD   57 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEc-CCEEEEEEEECC
Confidence            36999999999999999987 798887654321011235566664 788899997643

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=93.44  E-value=0.073  Score=46.80  Aligned_cols=58  Identities=14%  Similarity=0.335  Sum_probs=44.3

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHC----CcEEeeecc-------cc--CC---------c-eEEEEEEEcCCCCEEEEEe
Q 032616           22 NPKDNHISFQCENMAIVERRLKEM----KIDYVKSRV-------EE--GG---------I-NVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~----GI~~~~~~~-------~~--~g---------~-g~r~vFf~DPDGn~IEI~e   78 (137)
                      .++.+||||.|+||.+..++|+++    |+++...|.       ..  ++         + ....++=.|.+|+++.|.+
T Consensus       260 G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~Pp~~YYd~L~~R~~~~l~~e~~~~L~~~~ILvD~d~~G~LLQIFT  339 (398)
T PLN02875        260 GPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPPPPTYYKNLKKRVGDVLTEEQIKECEELGILVDKDDQGVLLQIFT  339 (398)
T ss_pred             CCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCChHHHHHHHHHHhccCCChhhHHHHHHcCEEEecCCCceEEEEec
Confidence            479999999999999999999999    999998441       00  10         0 1235677888899998886


Q ss_pred             e
Q 032616           79 C   79 (137)
Q Consensus        79 ~   79 (137)
                      .
T Consensus       340 k  340 (398)
T PLN02875        340 K  340 (398)
T ss_pred             c
Confidence            5

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.42  E-value=0.68  Score=31.34  Aligned_cols=56  Identities=13%  Similarity=0.168  Sum_probs=38.5

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeec-cccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSR-VEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~-~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +++|+++.|+|+++..+..++ .|.+..... .+..+  ....|+.-.+|..+|+++...
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~   58 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKG--FESYFLSFDDGARLELMTRPD   58 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCC--ceEEEEecCCCcEEEEEcCcc
Confidence            368999999999999988877 588765332 12223  244556545788999987544

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.21  E-value=0.95  Score=29.52  Aligned_cols=54  Identities=7%  Similarity=0.041  Sum_probs=37.9

Q ss_pred             CceEEEEeCCHHHHHHHHH-HCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCC
Q 032616           25 DNHISFQCENMAIVERRLK-EMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL   82 (137)
Q Consensus        25 ~~HIAF~VedId~v~~rLk-e~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~   82 (137)
                      ++|+++.|.|+++..+... -.|.+....... ..   ...|+..+++..++|......
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~-~~---~~~~~~~~~~~~i~l~~~~~~   55 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPF-LF---PGAWLYAGDGPQLHLIEEDPP   55 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCC-CC---CceEEEeCCCcEEEEEecCCC
Confidence            4799999999999998886 568876654321 11   345666666668899876543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=93.20  E-value=0.14  Score=38.62  Aligned_cols=54  Identities=13%  Similarity=0.245  Sum_probs=31.4

Q ss_pred             CceEEEEeCCHHHHHHHH-HHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           25 DNHISFQCENMAIVERRL-KEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        25 ~~HIAF~VedId~v~~rL-ke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++|+.+.|+|+++..+++ +..|+.+....... ++|+....+.=+|| .||+...+
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~-~~GT~N~li~f~~~-YlEli~i~   55 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHP-GWGTANALIPFGDG-YLELIAID   55 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-T-TT-EEEEEEE-SSS-EEEEEEES
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCC-CCccEEEEEeeCCc-eEEEEEeC
Confidence            479999999999999999 88899999766433 33444444444788 89999864

>PRK10148 hypothetical protein; Provisional

Probab=93.01  E-value=0.49  Score=35.55  Aligned_cols=57  Identities=11%  Similarity=-0.109  Sum_probs=41.9

Q ss_pred             CceEEEEeCCHHH---HHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCCC
Q 032616           25 DNHISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLP   83 (137)
Q Consensus        25 ~~HIAF~VedId~---v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~p   83 (137)
                      .-++++.++|.++   ++++|. .|.++..+. .+..++.+...+.||-|+.+.|.....-|
T Consensus        86 ~~~l~l~~~d~ee~~~~~~aLa-~gg~v~mpl-~~~~wg~~~g~v~D~fGi~W~l~~~~~~~  145 (147)
T PRK10148         86 GFTLVLDTQDVEEGKRWFDNLA-ANGKIEMAW-QETFWAHGFGKVTDKFGVPWMINVVKQQP  145 (147)
T ss_pred             eEEEEEECCCHHHHHHHHHHhh-CCCEEEecc-hhcchhhccEEEECCCCCEEEEEecCCCC
Confidence            3577777778665   778885 677877665 33456678999999999999998765444

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.23  E-value=1.1  Score=29.81  Aligned_cols=52  Identities=10%  Similarity=0.107  Sum_probs=36.8

Q ss_pred             eEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCC--CEEEEEeec
Q 032616           27 HISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDG--SMIEICNCD   80 (137)
Q Consensus        27 HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDG--n~IEI~e~~   80 (137)
                      |+++.|.|+++..+..++ .|.++........+  ...+++.++++  ..+++....
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~   55 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGG--FRWVTVAPPGSPETSLVLAPPA   55 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCC--cEEEEEeCCCCCeeEEEEeCCC
Confidence            899999999999998887 89998865432223  35666777765  456665443

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=92.09  E-value=0.26  Score=43.04  Aligned_cols=50  Identities=14%  Similarity=0.070  Sum_probs=38.0

Q ss_pred             CceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           25 DNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        25 ~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      ---+||.+++   +|++.++..+.|-+....+. +.|+   .-=|.||||+.+||.-
T Consensus       301 evLl~Ls~~Sre~VD~lv~~A~aaGG~~~~~~~-D~Gf---~rsf~D~DGH~WEi~~  353 (357)
T PRK01037        301 TTTLSLELECEHDFVRFLRRWEMLGGELGEQAD-GHFP---LRLVFDLDGHIWVVSC  353 (357)
T ss_pred             eEEEEeccCCHHHHHHHHHHHHHcCCCCCCCcc-cccC---cceeECCCCCEEEEEE
Confidence            3478899985   88889999999986655443 3343   5558999999999984

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=92.01  E-value=0.79  Score=31.01  Aligned_cols=42  Identities=14%  Similarity=0.266  Sum_probs=34.2

Q ss_pred             CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEE
Q 032616           34 NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC   77 (137)
Q Consensus        34 dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~   77 (137)
                      +.+++.+.|++.|+.+..-...++|  ...+...|.||..+||.
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g--~yev~~~~~dG~~~ev~   71 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDG--CYEVEARDKDGKKVEVY   71 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCC--EEEEEEEECCCCEEEEE
Confidence            7899999999999966654443444  47889999999999996

This is family M4 in the peptidase classification.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=91.58  E-value=1.1  Score=28.59  Aligned_cols=52  Identities=13%  Similarity=0.240  Sum_probs=40.7

Q ss_pred             eEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCC
Q 032616           27 HISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL   82 (137)
Q Consensus        27 HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~   82 (137)
                      |+++.|.|+++..+.+.+ .|.+....... ..  .+.+++.++ +..++|....+.
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~-~~--~~~~~~~~~-~~~i~l~~~~~~   53 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN-GG--AEFAVLGLG-GTRLELFEGDEP   53 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc-CC--EEEEEEecC-CceEEEecCCCC
Confidence            899999999999999998 89987766521 12  367778776 789999987653

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=91.56  E-value=1.7  Score=29.08  Aligned_cols=57  Identities=14%  Similarity=0.205  Sum_probs=40.4

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeecc-ccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~-~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +++|+++.|.|++++.+..++ .|.++..... ...+......++...++ .+++.....
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~   59 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEG-HIELFLNPS   59 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSS-CEEEEEEES
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccccc-ceeeeeecc
Confidence            468999999999999988777 5999887764 22222245666666665 477776644

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=91.23  E-value=0.53  Score=39.71  Aligned_cols=50  Identities=14%  Similarity=0.240  Sum_probs=38.7

Q ss_pred             CCCCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           20 NINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        20 ~inp~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      ++.+++.||.+.++++-...+.++..|-       ..+|  .-.+|+.||||+..++.+
T Consensus        93 elGndfg~i~I~s~dv~~~ve~v~~p~~-------~~~g--~~~~~v~dPdGykF~l~~  142 (299)
T KOG2943|consen   93 ELGNDFGGITIASDDVFSKVEKVNAPGG-------KGSG--CGIAFVKDPDGYKFYLID  142 (299)
T ss_pred             eccCCcccEEEeHHHHHHHHHHhcCcCC-------cccc--eEEEEEECCCCcEEEEec
Confidence            5677888999988888877777766543       1123  468999999999999997

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=90.73  E-value=2  Score=28.93  Aligned_cols=55  Identities=11%  Similarity=0.173  Sum_probs=38.2

Q ss_pred             CceEEEEeCCHHHHHHHHHHC-CcEEeeeccccCCceEEEEEEEcCC---CCEEEEEeec
Q 032616           25 DNHISFQCENMAIVERRLKEM-KIDYVKSRVEEGGINVDQLFFHDPD---GSMIEICNCD   80 (137)
Q Consensus        25 ~~HIAF~VedId~v~~rLke~-GI~~~~~~~~~~g~g~r~vFf~DPD---Gn~IEI~e~~   80 (137)
                      +.|+++.|.|+++..+..++. |.+.........+ +...+|+..++   +..+|+....
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~l~~~~   59 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEG-KFTLVFLGYPDEDSEGVLELTYNW   59 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCC-ceEEEEecCCCCCCccEEEEEecC
Confidence            469999999999999999875 9998765322211 13445666554   5789987643

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=90.52  E-value=1.6  Score=30.04  Aligned_cols=52  Identities=13%  Similarity=0.200  Sum_probs=37.8

Q ss_pred             CCceEEEEeCCHHHHHHHHHHC----CcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKEM----KIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~----GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +++|+.+.|.|+++..+...+.    |.+..... . .+    ..|+...++..+++.+..+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~-~-~~----~~~~~~~~~~~i~l~~~~~   56 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEW-E-DG----RSWRAGDGGTYLVLQQADG   56 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEee-c-cC----ceEEecCCceEEEEEeccc
Confidence            4689999999999999888775    88877653 1 12    2344335678899987654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=89.91  E-value=1.1  Score=33.77  Aligned_cols=60  Identities=13%  Similarity=0.154  Sum_probs=37.1

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccC-CceEEEEEEEcC----CCCEEEEEeecC
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEG-GINVDQLFFHDP----DGSMIEICNCDV   81 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~-g~g~r~vFf~DP----DGn~IEI~e~~~   81 (137)
                      ..++.++||+++|++++.++|++.|+.......+++ ...++.+|+.|+    .+..-+++++.+
T Consensus        75 ~~g~~~~~l~t~d~~~~~~~l~~~G~~~~~r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~~  139 (175)
T PF13468_consen   75 GEGLYGWALRTDDIEAVAARLRAAGLDAGSRVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWET  139 (175)
T ss_dssp             --EEEEEEEE-S-HHHHHHHHHTTT-EEEEEEEEEE-EEEEEEEEEE-SS---SS---EEEEESS
T ss_pred             CCCeEEEEEecCCHHHHHHHHHhcCCCCCCcCcCCCCcceEEEEEeCCcccccCCCCcEEEEeCC
Confidence            457889999999999999999999997433322222 234678888885    367778887755

>PRK11478 putative lyase; Provisional

Probab=89.62  E-value=2  Score=29.59  Aligned_cols=56  Identities=11%  Similarity=0.040  Sum_probs=35.8

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      +.+|+++.|+|+++..+..++ .|.++............. .++.-.++..+|+.+..
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~-~~~~~~~~~~l~l~~~~   62 (129)
T PRK11478          6 QVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWK-GDLALNGQYVIELFSFP   62 (129)
T ss_pred             eecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccce-eeEecCCCcEEEEEEec
Confidence            578999999999999988865 698876432211110011 12222356789998754

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=88.95  E-value=2.5  Score=28.84  Aligned_cols=51  Identities=0%  Similarity=0.068  Sum_probs=37.8

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCC-CCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPD-GSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPD-Gn~IEI~e~~~   81 (137)
                      +++|+++.|+|+++..+..++ .|.++....   +    ..+++..++ +..+.+...+.
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~----~~~~l~~~~~~~~l~l~~~~~   54 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLERT---D----STAVLGTGGKRPLLVLEEDPD   54 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEcC---C----CEEEEecCCCeEEEEEEeCCC
Confidence            568999999999999998886 698887652   1    245566554 57788877654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=86.80  E-value=0.5  Score=41.31  Aligned_cols=62  Identities=15%  Similarity=0.209  Sum_probs=42.4

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccc--c------CC--------ceEEEEEEEcCCCCEEEEEeecCCCCc
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE--E------GG--------INVDQLFFHDPDGSMIEICNCDVLPVV   85 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~--~------~g--------~g~r~vFf~DPDGn~IEI~e~~~~p~~   85 (137)
                      ..++.||||.++||.++.++|++.|+++...+..  +      ++        .....+|=.|++|.  |+.+-=+.|++
T Consensus       243 G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~tYYd~~~~R~~~~~e~ld~Lr~~~IL~D~~~~~~--~lLQift~~~~  320 (363)
T COG3185         243 GEGIQHIAFGTDDIYATVAALRERGVKFLPIPETYYDDLDARFPLHGEFLDALRELEILYDGDGGGG--ELLQIFTRTFI  320 (363)
T ss_pred             CCcceEEEecccHHHHHHHHHHHcCCccCCCchhHHHHHhhcCCCChHHHHHHHhcCeEeecCCCCc--EEEEEeccccc
Confidence            3478999999999999999999999998874320  0      00        01456777888884  44443334443

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=86.56  E-value=3  Score=32.28  Aligned_cols=58  Identities=14%  Similarity=0.084  Sum_probs=41.9

Q ss_pred             CCceEEEEeC--CHHHHHHHHHH-CCcEEeeecc-ccCCceEEEEEEEcCCC-CEEEEEeecC
Q 032616           24 KDNHISFQCE--NMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPDG-SMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~Ve--dId~v~~rLke-~GI~~~~~~~-~~~g~g~r~vFf~DPDG-n~IEI~e~~~   81 (137)
                      +++|+++.|+  |++++.+..++ .|.+...... +....+.+..++..|+| ..+|+.+..+
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~   65 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPAS   65 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCC
Confidence            5789999999  99999998765 7998765432 22122367888888875 5678887554

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=85.99  E-value=4.8  Score=28.66  Aligned_cols=52  Identities=8%  Similarity=0.049  Sum_probs=35.2

Q ss_pred             CceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           25 DNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        25 ~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++|++|.|.|+++..+..++ .|.+...... ..+  ....++. .++..+++....
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~-~~~--~~~~~~~-~g~~~l~l~~~~   53 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHG-SED--KASYLLR-QGDINFVLNSPL   53 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecC-CCc--eEEEEEE-cCCEEEEEecCC
Confidence            47999999999999999988 8998876432 112  2334443 345567776543

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=85.86  E-value=3.8  Score=27.86  Aligned_cols=53  Identities=13%  Similarity=0.276  Sum_probs=36.3

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeec-cccCCceEEEEEEEcCCCCEEEEEee
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSR-VEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~-~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ++.|+++.|.|+++..+..++ .|.+..... .+..+  ....|+. +++..+|+...
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~-~~~~~i~l~~~   55 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQG--VKVVFIA-LGNTKVELLEP   55 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCC--cEEEEEe-cCCEEEEEEec
Confidence            468999999999999998875 698876432 12222  3444444 34678999864

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=84.20  E-value=6.5  Score=29.31  Aligned_cols=52  Identities=8%  Similarity=0.042  Sum_probs=36.2

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEc-CCCCEEEEEeec
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHD-PDGSMIEICNCD   80 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~D-PDGn~IEI~e~~   80 (137)
                      +++|+++.|+|+++..+...+ .|.++.....   +  ...++..+ .+|..|++.+..
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~~~~~~l~l~~~~   54 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGGGPGAVVDVLEEP   54 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCCCCCCEEEEEeCC
Confidence            468999999999999988866 4988775431   2  12222223 368899998753

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=83.67  E-value=8.6  Score=26.66  Aligned_cols=53  Identities=8%  Similarity=0.142  Sum_probs=37.5

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcC--CCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDP--DGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DP--DGn~IEI~e~~~   81 (137)
                      +++|+.+.|+|+++..+...+ .|.+..... + .   ....|+..+  .+..++++..+.
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~-~-~---~~~~~~~~~~~~~~~l~l~~~~~   56 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRG-P-L---GGLVFLSRDPDEHHQIALITGRP   56 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeec-c-C---CcEEEEEecCCCceEEEEEecCC
Confidence            468999999999999999887 798876543 1 1   135566544  356788876543

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=83.00  E-value=10  Score=29.61  Aligned_cols=32  Identities=6%  Similarity=-0.024  Sum_probs=26.2

Q ss_pred             CCCCceEEEEeCCHHHHHHHHH-HCCcEEeeec
Q 032616           22 NPKDNHISFQCENMAIVERRLK-EMKIDYVKSR   53 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLk-e~GI~~~~~~   53 (137)
                      +-+++|.+|.|.|+++.++... -.|.+.....
T Consensus        25 ~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~   57 (185)
T PLN03042         25 GYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRL   57 (185)
T ss_pred             CcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEE
Confidence            4468999999999999998775 4799887664

>cd04895 ACT_ACR_1 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein)

Probab=82.58  E-value=4.1  Score=27.61  Aligned_cols=41  Identities=17%  Similarity=0.312  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHCCcEEeeeccc-cCCceEEEEEEEcCCCCEEE
Q 032616           35 MAIVERRLKEMKIDYVKSRVE-EGGINVDQLFFHDPDGSMIE   75 (137)
Q Consensus        35 Id~v~~rLke~GI~~~~~~~~-~~g~g~r~vFf~DPDGn~IE   75 (137)
                      +..+.+-|.+.|+.+....+. .++.-...||+.|.+|+.|+
T Consensus        15 L~~i~~~l~~~gl~I~~AkIsT~Gerv~DvFyV~d~~g~kl~   56 (72)
T cd04895          15 LLEAVQVLTDLDLCITKAYISSDGGWFMDVFHVTDQLGNKLT   56 (72)
T ss_pred             HHHHHHHHHHCCcEEEEEEEeecCCeEEEEEEEECCCCCCCC
Confidence            677889999999999987653 33444789999999999763

This CD includes the N-terminal ACT domain, of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein). ACR proteins, found only in Arabidopsis and Oryza, as yet, are proposed to function as novel regulatory or sensor proteins in plants. Nine ACR gene products have been described (ACR1-8 in Arabidopsis and OsARC1-9 in Oryza) and are represented in this CD. Members of this CD belong to the superfamily of ACT regulatory domains.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=82.08  E-value=18  Score=26.62  Aligned_cols=65  Identities=15%  Similarity=0.231  Sum_probs=39.6

Q ss_pred             CCceEEEEeCCHHHHHHHHH-HCCcEEeeec-cccC----------CceEEEEEEE---cCCCCEEEEEeecCCCCcccC
Q 032616           24 KDNHISFQCENMAIVERRLK-EMKIDYVKSR-VEEG----------GINVDQLFFH---DPDGSMIEICNCDVLPVVPLA   88 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLk-e~GI~~~~~~-~~~~----------g~g~r~vFf~---DPDGn~IEI~e~~~~p~~pl~   88 (137)
                      +..|+++.|.|+++.++-=. ..|.+..... .+++          + ....+|+.   +..+..+|+..-......+.+
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g   80 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDG-KWSKTMIGYGPEDDHFVVELTYNYGIGDYELG   80 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCC-cEEEEEEecCCCCCccEEEeEecCCCCCCCCC
Confidence            46799999999999998774 4799876543 1211          1 01234443   356778999853222224554


Q ss_pred             C
Q 032616           89 G   89 (137)
Q Consensus        89 ~   89 (137)
                      .
T Consensus        81 ~   81 (127)
T cd08358          81 N   81 (127)
T ss_pred             C
Confidence            3

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=81.69  E-value=7.9  Score=29.38  Aligned_cols=57  Identities=16%  Similarity=0.195  Sum_probs=39.7

Q ss_pred             CCCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           21 INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        21 inp~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      +.++..-++|+|+|.++++++-.++|.+....+...+.  ...-=++-+.|.++-+++.
T Consensus        70 HG~sv~aiafrV~Da~~A~~rA~~~GA~~~~~~~~~~e--~~~paI~g~G~sl~yfVdr  126 (139)
T PF14696_consen   70 HGPSVCAIAFRVDDAAAAYERAVALGAEPVQEPTGPGE--LNIPAIRGIGGSLHYFVDR  126 (139)
T ss_dssp             HSSEEEEEEEEES-HHHHHHHHHHTT--EEEEEEETT---BEEEEEE-CCC-EEEEEE-
T ss_pred             cCCEEEEEEEEeCCHHHHHHHHHHcCCcCcccCCCCCc--EeeeeEEccCCCEEEEEec
Confidence            46788899999999999999999999998887644332  4555667777777777764

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=80.90  E-value=10  Score=26.83  Aligned_cols=56  Identities=20%  Similarity=0.169  Sum_probs=34.4

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      +++|+++.|+|+++..+..++ .|.+................|+. -.|.++++.+..
T Consensus         4 ~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~   60 (131)
T cd08364           4 GLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFL-IGGLWIAIMEGD   60 (131)
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEE-cCCeEEEEecCC
Confidence            678999999999999988876 78876543211110001122232 236788887543

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=80.32  E-value=13  Score=26.23  Aligned_cols=50  Identities=8%  Similarity=0.142  Sum_probs=34.8

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCC---CCEEEEEee
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPD---GSMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPD---Gn~IEI~e~   79 (137)
                      +++|++|.|.|+++..+..++ .|.+......   .   ...|+...+   +..+++...
T Consensus         3 ~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~---~---~~~~~~~~~~~~~~~i~l~~~   56 (134)
T cd08360           3 RLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK---G---RGAFLRAAGGGDHHNLFLIKT   56 (134)
T ss_pred             eeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec---C---cEEEEECCCCCCCcEEEEecC
Confidence            578999999999999998866 5998765431   1   234665543   357777643

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	137
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	6e-13
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	3e-12
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	6e-12
3ghj_A	141	Putative integron gene cassette protein; integron	7e-12
2p25_A	126	Glyoxalase family protein; structural genomics, MC	2e-11
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	6e-11
3huh_A	152	Virulence protein STM3117; structural genomics, ny	3e-09
1nki_A	135	Probable fosfomycin resistance protein; potassium	6e-09
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	6e-09
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	8e-09
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-08
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	1e-07
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	2e-07
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	3e-07
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	7e-07
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	8e-07
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	4e-06
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	7e-06
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	5e-05
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	6e-05
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	7e-05
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	3e-04
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-04
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	5e-04

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 60.6 bits (147), Expect = 6e-13
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 6/75 (8%)

Query: 2   GIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINV 61
            + L   E    +P   +  +      +   E+   + +RL++  +   K    EG    
Sbjct: 46  WVCLSYDEARQYVP--PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEG---- 99

Query: 62  DQLFFHDPDGSMIEI 76
              +F DPDG  +E+
Sbjct: 100 ASFYFLDPDGHKLEL 114

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 58.7 bits (142), Expect = 3e-12
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 12/74 (16%)

Query: 3   IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 62
           IH+    E +  P        K  H +F    +   ++ L +  I+ +          V 
Sbjct: 60  IHI--GVEQNFNP-------AKRAHPAFYVLKIDEFKQELIKQGIEVIDDHARPD---VI 107

Query: 63  QLFFHDPDGSMIEI 76
           + +  DP G+ IE 
Sbjct: 108 RFYVSDPFGNRIEF 121

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 58.3 bits (141), Expect = 6e-12
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 5/80 (6%)

Query: 3   IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAI--VERRLKEMKIDYVKSRVEEGGIN 60
           + L    E        +    +  H++F  +          + E KI      V      
Sbjct: 75  LDLFGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTG- 133

Query: 61  VDQLFFHDPDGSMIEICNCD 80
              ++F+DPDG MIEI  CD
Sbjct: 134 -RGVYFYDPDGFMIEIR-CD 151

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 57.7 bits (140), Expect = 7e-12
 Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 13/78 (16%)

Query: 2   GIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAI--VERRLKEMKIDYVKSRVEEGGI 59
           G+ +L+ E+           N +  H SF+ E   I  +++ L+   +  V   V +  +
Sbjct: 73  GMVVLQEEKE----------NWQQQHFSFRVEKSEIEPLKKALESKGVS-VHGPVNQEWM 121

Query: 60  NVDQLFFHDPDGSMIEIC 77
               L+F DP+G  +E  
Sbjct: 122 QAVSLYFADPNGHALEFT 139

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 56.3 bits (136), Expect = 2e-11
 Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 3/75 (4%)

Query: 3   IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 62
           + +          +          H++F+ E++  V   L E  I+    RV++      
Sbjct: 54  LEIF--ISDQFPARPSYPEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTG-KK 110

Query: 63  QLFFHDPDGSMIEIC 77
             FF DPDG  +E+ 
Sbjct: 111 MTFFFDPDGLPLELH 125

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 51.2 bits (122), Expect = 3e-09
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 3/80 (3%)

Query: 1   MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGI- 59
             I+L + E     PKA +      +        +  V   + +  I  V+  VE  G  
Sbjct: 64  QKINLHQQEME-FEPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGAT 122

Query: 60  -NVDQLFFHDPDGSMIEICN 78
             +  ++  DPDG++IEI  
Sbjct: 123 GEIMSIYIRDPDGNLIEISQ 142

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 50.2 bits (120), Expect = 6e-09
 Identities = 19/77 (24%), Positives = 27/77 (35%), Gaps = 11/77 (14%)

Query: 2   GIHLLKSEEPDNLPKAGKNINPKDNHISFQC--ENMAIVERRLKEMKIDYVKSRVEEGGI 59
            + L  S EP     A         H +F     + A    +L+   +   K    EG  
Sbjct: 44  SLWLCLSREPQYGGPAADY-----THYAFGIAAADFARFAAQLRAHGVREWKQNRSEG-- 96

Query: 60  NVDQLFFHDPDGSMIEI 76
             D  +F DPDG  +E 
Sbjct: 97  --DSFYFLDPDGHRLEA 111

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 50.1 bits (120), Expect = 6e-09
 Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 6/79 (7%)

Query: 2   GIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVE---RRLKEMKIDYVKSRVEEGG 58
           G+ ++  E             P  +H+SF  E+M  ++    RL +    +  ++    G
Sbjct: 50  GLSIVLREHDGGGTDLFDETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFTPTQELPFG 109

Query: 59  INVDQLFFHDPDGSMIEIC 77
                L F D D   +E  
Sbjct: 110 ---WILAFRDADNIALEAM 125

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 49.5 bits (118), Expect = 8e-09
 Identities = 11/82 (13%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 2   GIHLLKSEEPDNLPKAGKNINPKDNHISFQCE-NMAIVERRLKEMKIDYVKSRVEEGGIN 60
              +   +  +      +N+      + F  +  ++   + +++  +  ++  V+  G  
Sbjct: 50  HQKINLHQLGNEFEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQ 109

Query: 61  --VDQLFFHDPDGSMIEICNCD 80
             +   +F DPDG++IE+    
Sbjct: 110 GAITSFYFRDPDGNLIEVSTYS 131

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 47.6 bits (113), Expect = 5e-08
 Identities = 12/81 (14%), Positives = 29/81 (35%), Gaps = 5/81 (6%)

Query: 1   MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG 57
           +G +  ++ E   L +     +     ++F  +    V++            +K+  E  
Sbjct: 53  IGFNAHEAYELMQLAQ-FSETSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETY 111

Query: 58  GINVDQLFFHDPDGSMIEICN 78
             +  Q    DP+ ++  I N
Sbjct: 112 Y-HWYQAVLLDPERNVFRINN 131

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 46.4 bits (110), Expect = 1e-07
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 23  PKDNHISFQC--ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 76
              NHI+FQ   E +     R+K + ++    R    G     ++F+D D  + E+
Sbjct: 65  RTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQG-EGRSIYFYDFDNHLFEL 119

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 46.4 bits (110), Expect = 2e-07
 Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 5/77 (6%)

Query: 5   LLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVE--EGGI 59
           +    E               NH++F   +   V+    +LKE     +        GG 
Sbjct: 67  VFVQTEDRFQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGP 126

Query: 60  NVDQLFFHDPDGSMIEI 76
           N   +F  DP+   +EI
Sbjct: 127 NHYAVFCEDPNRIKVEI 143

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 45.7 bits (108), Expect = 3e-07
 Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 23  PKDNHISFQC--ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD 80
              NHI+F+    +      R+ ++ +D    R    G     ++F+D D  M E+ +  
Sbjct: 65  RSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFEL-HTG 122

Query: 81  VLP 83
            L 
Sbjct: 123 TLT 125

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 44.7 bits (105), Expect = 7e-07
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 5/81 (6%)

Query: 1   MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCE-NMAIVERRLKEMKIDYVKSRVEEGGI 59
              +L +  +    PKA  +  P    I    E  +  + + LK   +   +  V   G 
Sbjct: 68  QKFNLHEVGKEFE-PKA-AHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGA 125

Query: 60  --NVDQLFFHDPDGSMIEICN 78
              +  ++F DPD ++IE+ N
Sbjct: 126 KGPIMSIYFRDPDRNLIEVSN 146

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 44.3 bits (105), Expect = 8e-07
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 26  NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC 77
            H++F  E++    + L  + I   + R ++        FF DPDG  +E+ 
Sbjct: 83  RHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKK-MAFFFDPDGLPLELH 133

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 43.5 bits (102), Expect = 4e-06
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 18  GKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC 77
           G +      HI     ++    +R +E+ + +VK + ++G +     F  DPDG  IEI 
Sbjct: 118 GNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK-KPDDGKMK-GLAFIQDPDGYWIEIL 175

Query: 78  NCDVLPVV 85
           N + +  +
Sbjct: 176 NPNKIATI 183

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 41.6 bits (98), Expect = 7e-06
 Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 7/57 (12%)

Query: 23  PKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 76
           PK  H+ F  E+   V++   RLKE        +           +   P G  IE+
Sbjct: 59  PKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHA----YTFYVEAPGGFTIEV 111

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 39.8 bits (93), Expect = 5e-05
 Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 9/84 (10%)

Query: 2   GIHLLKSEEPDNLPKAGKNINPKD----NHISFQCENMAIVE---RRLKEMKIDYVKSRV 54
            + LL   +  +   A   I         H  F  ++ A V+    R + ++I       
Sbjct: 50  QMLLLFDPQESSRADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHR 109

Query: 55  EEGGINVDQLFFHDPDGSMIEICN 78
              G     ++  DP G+ +E+  
Sbjct: 110 WPNGS--YSVYIRDPAGNSVEVGE 131

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 39.4 bits (92), Expect = 6e-05
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 5/79 (6%)

Query: 2   GIHLLKSEEPDNLPKAGKNINPKD---NHISFQCENMAIVERRLKEMKIDYVKSRVEEGG 58
            I L +   P       +           + F  E++  +  RL +   + V   V+   
Sbjct: 71  RIELSRFLTPPT-IADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN 129

Query: 59  INVDQLFFHDPDGSMIEIC 77
            +    +    +G +I + 
Sbjct: 130 -SYRLCYIRGVEGILIGLA 147

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 39.0 bits (91), Expect = 7e-05
 Identities = 11/76 (14%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 3   IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 62
           + L+  +  D+             HI ++ E++      + ++     K       I+  
Sbjct: 56  VELVAPDGEDSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNR 115

Query: 63  Q-LFFHDPDGSMIEIC 77
           +  F    D  +IE+ 
Sbjct: 116 KVAFLFSTDIGLIELL 131

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 37.2 bits (86), Expect = 3e-04
 Identities = 9/63 (14%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 15  PKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMI 74
             A +    ++  + F+  ++    + +    ++ +     +         F+DPDG  I
Sbjct: 65  SDAQEAYGRRNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAW-GQRVFRFYDPDGHAI 122

Query: 75  EIC 77
           E+ 
Sbjct: 123 EVG 125

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 8/58 (13%), Positives = 19/58 (32%), Gaps = 7/58 (12%)

Query: 27  HISFQCENMAIVERRLKEMKIDYVKS-------RVEEGGINVDQLFFHDPDGSMIEIC 77
           +  +   ++  + +R+ E   D +         +  +      Q     PDG +   C
Sbjct: 76  NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFC 133

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 36.6 bits (85), Expect = 5e-04
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 4/79 (5%)

Query: 3   IHLLKSEEPD--NLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 60
           + LL     D        KN     +HI  + +N+      LK+ KI  +   V+ G   
Sbjct: 54  MELLHPLGLDSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHG 113

Query: 61  VDQLFFH--DPDGSMIEIC 77
              +F H  D  G ++E+ 
Sbjct: 114 KPVIFLHPKDCGGVLVELE 132

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	137
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.39
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.38
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.38
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.35
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.34
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.33
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.3
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.28
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.28
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.28
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.24
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.22
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.21
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.21
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.17
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.17
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.17
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.17
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.16
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.16
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.16
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.16
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.15
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.15
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.14
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.14
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.13
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.13
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.13
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.12
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.12
2i7r_A	118	Conserved domain protein; structural genomics cons	99.11
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.11
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.1
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.08
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.07
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.07
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.07
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.07
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.06
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.06
3ghj_A	141	Putative integron gene cassette protein; integron	99.06
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.05
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.05
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.05
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.04
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.03
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.03
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.02
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.01
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	98.99
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	98.98
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	98.95
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	98.86
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	98.82
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	98.81
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	98.79
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	98.78
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	98.77
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	98.77
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	98.76
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	98.75
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	98.75
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	98.75
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	98.73
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	98.72
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	98.69
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	98.69
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	98.67
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	98.64
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	98.62
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	98.6
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	98.58
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	98.58
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	98.54
1xy7_A	166	Unknown protein; structural genomics, protein stru	98.52
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	98.5
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	98.49
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	98.47
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	98.44
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	98.43
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	98.4
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	98.39
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	98.3
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	98.3
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	98.25
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	98.24
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	98.24
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	98.24
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	97.99
1tsj_A	139	Conserved hypothetical protein; structural genomic	97.95
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	97.79
3l20_A	172	Putative uncharacterized protein; hypothetical pro	97.64
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	97.51
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	97.5
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	97.49
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	97.33
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.18
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	97.12
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	97.01
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	96.65
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	96.23
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	96.18
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	95.99
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	95.69
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	95.49
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	95.45
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	95.34
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	94.96
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	94.88
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	94.73
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	94.64
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	94.48
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	94.24
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	94.06
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	94.04
2p25_A	126	Glyoxalase family protein; structural genomics, MC	93.95
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	92.12
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	91.72
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	91.43
3ghj_A	141	Putative integron gene cassette protein; integron	91.04
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	91.01
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	90.56
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	90.05
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	88.75
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	87.77
3iuz_A	340	Putative glyoxalase superfamily protein; struct ge	87.4
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	87.32
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	85.29
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	84.72
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	84.54
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	83.02
3huh_A	152	Virulence protein STM3117; structural genomics, ny	82.53
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	82.47
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	82.43
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	81.98
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	81.87
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	80.86

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.39  E-value=4.4e-13  Score=92.82  Aligned_cols=57  Identities=16%  Similarity=0.214  Sum_probs=47.2

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccc-cCCceEEEEEEEcCCCCEEEEEe
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE-EGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~-~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      .++.+|+||.|+|+++++++|+++|+++...+.+ .+..|.+.+||+|||||+|||++
T Consensus        75 ~~g~~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e  132 (133)
T 3hdp_A           75 GSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLE  132 (133)
T ss_dssp             SCEEEEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEE
T ss_pred             CCceEEEEEEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEec
Confidence            4577899999999999999999999999875422 11123689999999999999987

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.38  E-value=2.6e-12  Score=86.96  Aligned_cols=73  Identities=25%  Similarity=0.314  Sum_probs=53.4

Q ss_pred             EEEeecCCCCCCCCCCCCCCCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616            3 IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus         3 IHLl~~~~~~~~~~~~~~inp~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      ++|++...+...+. . +..++..|++|.|+|+++++++|+++|+++...+.. ...|.+.+||+|||||+|||++
T Consensus        54 l~l~~~~~~~~~~~-~-~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           54 LEIFISDQFPARPS-Y-PEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVD-DFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EEEEECTTCCCCCC-S-SCCSSCCCEEEECSCHHHHHHHHHHTTCCCCCCEEC-TTTCCEEEEEECTTCCEEEEEC
T ss_pred             EEEEeccCCCCCCC-C-CCCccceEEEEEeCCHHHHHHHHHHcCCcccccccc-CCCCcEEEEEECCCCCEEEeeC
Confidence            56766544332221 1 224467899999999999999999999998765432 2233589999999999999975

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.38  E-value=4.4e-12  Score=88.97  Aligned_cols=77  Identities=22%  Similarity=0.261  Sum_probs=56.3

Q ss_pred             eEEEeecCCCCCCCCCCCCCCCCCceEEEEeC--CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616            2 GIHLLKSEEPDNLPKAGKNINPKDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus         2 ~IHLl~~~~~~~~~~~~~~inp~~~HIAF~Ve--dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .++|++...............++..|++|.|+  |+++++++|+++|+++...+... +.+ +.+||+|||||+|||++.
T Consensus        74 ~l~l~~~~~~~~~~~~~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~-~~g-~~~~~~DPdG~~iel~~~  151 (156)
T 3kol_A           74 ILDLFGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTR-PTG-RGVYFYDPDGFMIEIRCD  151 (156)
T ss_dssp             EEEEEECTTCCCSSSSTTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC--CC-EEEEEECTTSCEEEEEEC
T ss_pred             EEEEEecCCCCcCCCCCCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceec-CCc-cEEEEECCCCCEEEEEec
Confidence            36777665543221111123457899999999  99999999999999998766443 233 699999999999999976


Q ss_pred             c
Q 032616           80 D   80 (137)
Q Consensus        80 ~   80 (137)
                      .
T Consensus       152 ~  152 (156)
T 3kol_A          152 P  152 (156)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.35  E-value=3.5e-12  Score=86.65  Aligned_cols=57  Identities=23%  Similarity=0.352  Sum_probs=47.3

Q ss_pred             CCCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           21 INPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        21 inp~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      ..++..|++|.|+|+++++++|+++|+++...+... ..+.+.+||+|||||.|||++
T Consensus        78 ~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           78 EACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDD-YTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECT-TSCCEEEEEECTTCCEEEEEC
T ss_pred             CCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccC-CCceEEEEEECCCCCEEEEeC
Confidence            344678999999999999999999999998655332 223589999999999999975

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.34  E-value=9.5e-12  Score=84.71  Aligned_cols=72  Identities=15%  Similarity=0.192  Sum_probs=53.9

Q ss_pred             eEEEeecCCCCCCCCCCCCCCCCCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEE
Q 032616            2 GIHLLKSEEPDNLPKAGKNINPKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC   77 (137)
Q Consensus         2 ~IHLl~~~~~~~~~~~~~~inp~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~   77 (137)
                      .++|.+..+....+.   ...++..|++|.|+|   +++++++|+++|+++...+.. .+.|.+.+||+|||||+|||.
T Consensus        52 ~l~l~~~~~~~~~~~---~~~~g~~hi~~~v~d~~~v~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           52 RLEIMSRTDVTGKTT---GENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             EEEEEEETTCCCCCC---SSCSSCCCEEEECSSHHHHHHHHHHHHHTTCCEEEEEEE-CTTSCEEEEEECTTSCEEEEE
T ss_pred             EEEEEecCCCCCCCC---cCCCceEEEEEEcCCHHHHHHHHHHHHHcCCeEecCccc-CCCCcEEEEEECCCCCEEEEe
Confidence            366766554432221   134467899999999   889999999999999876533 233468999999999999996

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.33  E-value=3.1e-12  Score=92.35  Aligned_cols=57  Identities=18%  Similarity=0.294  Sum_probs=47.9

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      .+..|++|.|+|+++++++|+++|+++...+...+ + .+.+||+|||||+|||.+...
T Consensus        97 ~g~~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~-~-g~~~~f~DPdGn~iel~q~~~  153 (155)
T 4g6x_A           97 DGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMG-P-VVTAILDDTCGNLIQLMQIAY  153 (155)
T ss_dssp             TTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEECS-S-CEEEEEECSSSCEEEEEEC--
T ss_pred             CCceEEEeeechhhhhhhHHhcCCcEEeeCCEEcC-C-eEEEEEECCCCCEEEEEEECC
Confidence            35679999999999999999999999988775433 3 388999999999999998653

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.30  E-value=2.4e-11  Score=83.07  Aligned_cols=62  Identities=16%  Similarity=0.429  Sum_probs=49.9

Q ss_pred             CCCCCCceEEEEeCC-HHHHHHHHHHCCcEEeeecccc--CCceEEEEEEEcCCCCEEEEEeecC
Q 032616           20 NINPKDNHISFQCEN-MAIVERRLKEMKIDYVKSRVEE--GGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        20 ~inp~~~HIAF~Ved-Id~v~~rLke~GI~~~~~~~~~--~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ...++..|++|.|+| +++++++|+++|+++...+...  ...+.+.+||+|||||+|||+++.+
T Consensus        68 ~~~~~~~~~~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           68 NVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             TCCTTCCEEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             CCCCCccEEEEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            345578899999997 9999999999999998765321  1112589999999999999998753

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.28  E-value=1.6e-11  Score=86.04  Aligned_cols=57  Identities=14%  Similarity=0.153  Sum_probs=48.0

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++..|++|.|+|+++++++|+++|+++...+... ++|.+.+||+|||||+|||++..
T Consensus        94 ~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           94 LGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQY-ENSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             BEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEE-TTTEEEEEEECGGGCEEEEEEEC
T ss_pred             CceEEEEEEeCCHHHHHHHHHHCCCeecCCCccc-CCceEEEEEECCCCCEEEEEecc
Confidence            3567999999999999999999999998765332 23468999999999999999864

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.28  E-value=4e-11  Score=82.35  Aligned_cols=58  Identities=22%  Similarity=0.304  Sum_probs=46.8

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeecccc-CCceEEEEEEEcCCCCEEEEEeecC
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE-GGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~-~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ++..|++|.|+|+++++++|+++|+++...+... .|. .+.+||+|||||+|||.+...
T Consensus        70 ~~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~~DPdG~~iel~~~~~  128 (135)
T 1f9z_A           70 TAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGT-TVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             SSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEECTTSC-CEEEEEECTTSCEEEEEEC--
T ss_pred             CCccEEEEEeCCHHHHHHHHHHCCCEEecCCccCCCCc-eeEEEEECCCCCEEEEEecCC
Confidence            4667999999999999999999999998765322 231 368999999999999998643

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.28  E-value=3.7e-11  Score=82.71  Aligned_cols=55  Identities=20%  Similarity=0.320  Sum_probs=47.7

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++..|++|.|+|+++++++|+++|+++...+ ...|  .+.+||+|||||.|||.+..
T Consensus        71 ~~~~~~~f~v~d~~~~~~~l~~~G~~~~~~~-~~~g--~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           71 AKRAHPAFYVLKIDEFKQELIKQGIEVIDDH-ARPD--VIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             CSSSCEEEEETTHHHHHHHHHHTTCCCEEEC-SSTT--EEEEEEECTTSCEEEEEEEC
T ss_pred             CCceEEEEEcCCHHHHHHHHHHcCCCccCCC-CCCC--eeEEEEECCCCCEEEEEeCC
Confidence            3578999999999999999999999998765 3233  68999999999999999865

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.24  E-value=8.5e-11  Score=82.07  Aligned_cols=57  Identities=19%  Similarity=0.363  Sum_probs=48.4

Q ss_pred             CCCCceEEEEeCC---HHHHHHHHHH---CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCEN---MAIVERRLKE---MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~Ved---Id~v~~rLke---~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .++..|++|.|+|   +++++++|++   +|+++...+... .+| +.+||+|||||.|||++.+
T Consensus        70 ~~~~~~~~~~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~-~~g-~~~~~~DPdGn~iel~~~d  132 (132)
T 3sk2_A           70 IPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTD-VFG-RTFLISDPDGHIIRVCPLD  132 (132)
T ss_dssp             SCCCEEEEEEESSHHHHHHHHHHHHHCSSSCCEEEEEEEEE-TTE-EEEEEECTTCCEEEEEECC
T ss_pred             CCCcceEEEEeCCHHHHHHHHHHHHhhhcCCCEEeeCCccc-Cce-EEEEEECCCCCEEEEEeCC
Confidence            4567899999986   9999999999   999998766443 355 8999999999999998753

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.22  E-value=3.7e-11  Score=82.11  Aligned_cols=54  Identities=19%  Similarity=0.257  Sum_probs=46.3

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      +..|++|.|+|+++++++|+++|+++...+... .+|.+.+||+|||||.|||.+
T Consensus        79 ~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           79 GYTGISLITRDIDEAYKTLTERGVTFTKPPEMM-PWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCEESSSCEEC-TTSCEEEEEECTTCEEEEEEE
T ss_pred             CeEEEEEEeCCHHHHHHHHHHCCCEeecCCCcC-CCCCEEEEEECCCCCEEEEEe
Confidence            568999999999999999999999998655332 234589999999999999986

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.21  E-value=2.7e-11  Score=89.00  Aligned_cols=56  Identities=27%  Similarity=0.418  Sum_probs=47.6

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +..|++|.|+|+++++++|+++|+++...+... .+ .+.+||+|||||+|||++...
T Consensus       127 g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~-~~-~~~~~~~DPdG~~iel~~~~~  182 (187)
T 3vw9_A          127 GFGHIGIAVPDVYSACKRFEELGVKFVKKPDDG-KM-KGLAFIQDPDGYWIEILNPNK  182 (187)
T ss_dssp             BEEEEEEECSCHHHHHHHHHHTTCCEEECTTSS-SS-TTCEEEECTTCCEEEEECGGG
T ss_pred             ceeEEEEEECCHHHHHHHHHHCCCeEeeCCccC-Cc-ceEEEEECCCCCEEEEEEccc
Confidence            678999999999999999999999999866432 22 257899999999999998764

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.21  E-value=4.8e-11  Score=87.85  Aligned_cols=59  Identities=25%  Similarity=0.375  Sum_probs=49.6

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCCC
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLP   83 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~p   83 (137)
                      ++..|++|.|+|+++++++|+++|+++...+....+  .+.+||+|||||+|||++...+|
T Consensus       123 ~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~~~  181 (184)
T 2za0_A          123 RGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKIA  181 (184)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTTGG
T ss_pred             CCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCccc
Confidence            467899999999999999999999999876543222  36899999999999999887665

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.17  E-value=7.7e-11  Score=82.68  Aligned_cols=58  Identities=12%  Similarity=0.098  Sum_probs=49.0

Q ss_pred             CCCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .++..|++|.|+   |+++++++|+++|+++...+... .+|.+.+||+|||||.|||.+..
T Consensus        69 ~~~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           69 GGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNA-VWGQRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             SSCSEEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEE-TTTEEEEEEECTTCCEEEEEEEC
T ss_pred             CCCeEEEEEEeCCHHHHHHHHHHHHHCCCceeeCCccc-CCCcEEEEEECCCCCEEEEEeCC
Confidence            346789999999   99999999999999998765432 23468999999999999999865

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.17  E-value=2.8e-11  Score=82.17  Aligned_cols=57  Identities=23%  Similarity=0.350  Sum_probs=45.2

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEE--EcCCCCEEEEEe
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFF--HDPDGSMIEICN   78 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf--~DPDGn~IEI~e   78 (137)
                      .++..|++|.|+|+++++++|+++|+++...+...+..|.+.+|+  +|||||+|||++
T Consensus        75 ~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A           75 AGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             TCEEEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEE
T ss_pred             CCCceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEc
Confidence            446789999999999999999999999876532222223466777  899999999986

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.17  E-value=7.5e-11  Score=81.75  Aligned_cols=58  Identities=16%  Similarity=0.233  Sum_probs=47.2

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEE-------eeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDY-------VKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~-------~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ++..|++|.|+|+++++++|+++|+++       ...+.. ..+|.+.+||+|||||.|||.+...
T Consensus        57 ~~~~~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~-~~~g~~~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           57 ASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPEL-QGWGGTMAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             GCCCEEEEEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEE-CTTSSEEEEEECTTSCEEEEEECCC
T ss_pred             CcceEEEEEECCHHHHHHHHHHCCCccccccCccccCCcc-cCcccEEEEEECCCCCEEEEecchh
Confidence            356799999999999999999999994       444432 2234689999999999999998654

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.17  E-value=1.3e-10  Score=82.48  Aligned_cols=61  Identities=25%  Similarity=0.432  Sum_probs=48.0

Q ss_pred             CCCCCceEEEEeC-CHHHHHHHHHHCCcEEeeecccc-CCce-EEEEEEEcCCCCEEEEEeecC
Q 032616           21 INPKDNHISFQCE-NMAIVERRLKEMKIDYVKSRVEE-GGIN-VDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        21 inp~~~HIAF~Ve-dId~v~~rLke~GI~~~~~~~~~-~g~g-~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ..++..|++|.+. |+++++++|+++|+++...+... ++.| .+.+||+|||||+|||++...
T Consensus        82 ~~~g~~hi~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  145 (152)
T 3huh_A           82 PTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVE  145 (152)
T ss_dssp             CCTTCCEEEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC--
T ss_pred             CCCCccEEEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEeccc
Confidence            3557789999997 99999999999999988765321 1222 489999999999999998653

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.16  E-value=2.8e-11  Score=87.76  Aligned_cols=59  Identities=19%  Similarity=0.348  Sum_probs=47.4

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeee-ccccCCceEEEEEEE--cCCCCEEEEEeecC
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKS-RVEEGGINVDQLFFH--DPDGSMIEICNCDV   81 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~-~~~~~g~g~r~vFf~--DPDGn~IEI~e~~~   81 (137)
                      .++..|+||.|+|+++++++|+++|+++... +.. ...|.+.+|+.  |||||+|||++...
T Consensus        77 ~~g~~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~-~~~g~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           77 GEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVP-GARGAQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCBSCSSCEE-CGGGCEEEEBCGGGTTTCCEEEEECCC
T ss_pred             CCCeEEEEEEECCHHHHHHHHHHCCCEecccCccc-CCCCcEEEEEeccCCCeEEEEEEecCC
Confidence            3578899999999999999999999999766 322 22235677774  99999999998754

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.16  E-value=1.2e-10  Score=84.23  Aligned_cols=56  Identities=14%  Similarity=0.275  Sum_probs=48.4

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +..|++|.|+|+++++++|+++|+++...+... .+| +.+||+|||||+|||++..+
T Consensus        65 ~~~hl~f~V~d~d~~~~~l~~~G~~v~~~p~~~-~~G-~~~~~~DPdG~~iel~~~~~  120 (144)
T 3r6a_A           65 RNTQATFLVDSLDKFKTFLEENGAEIIRGPSKV-PTG-RNMTVRHSDGSVIEYVEHSK  120 (144)
T ss_dssp             GGCCEEEEESCHHHHHHHHHHTTCEEEEEEEEE-TTE-EEEEEECTTSCEEEEEEECC
T ss_pred             cceEEEEEeCCHHHHHHHHHHcCCEEecCCccC-CCc-eEEEEECCCCCEEEEEEcCC
Confidence            457999999999999999999999998776433 234 88999999999999999875

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.16  E-value=6.6e-11  Score=80.27  Aligned_cols=55  Identities=25%  Similarity=0.392  Sum_probs=46.5

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ...|++|.|+|+++++++|+++|+++...+... .+|.+.+||+|||||.|||.+.
T Consensus        64 ~~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           64 DVPDLSIEVDNFDEVHARILKAGLPIEYGPVTE-AWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             CCCSEEEEESCHHHHHHHHHHTTCCCSEEEEEC-TTSCEEEEEECTTSCEEEEEEC
T ss_pred             ceeEEEEEECCHHHHHHHHHHCCCccccCCccC-CCccEEEEEECCCCCEEEEEec
Confidence            457999999999999999999999988765432 2346899999999999999864

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.15  E-value=8.9e-11  Score=83.54  Aligned_cols=56  Identities=13%  Similarity=0.112  Sum_probs=46.6

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .+..|++|.|+   +++++++++++.|+++...+...++  .+++||+|||||+|||...+
T Consensus        76 ~~~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~~~  134 (149)
T 4gym_A           76 TTEAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMWMS  134 (149)
T ss_dssp             CBSCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEEEC
T ss_pred             CCeeEEEEEeccHHHHHHHHHHHHhcCceeeccccccCC--EEEEEEEcCCCCEEEEEEEC
Confidence            34569999996   5788999999999999987755433  48999999999999998654

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.15  E-value=3.7e-11  Score=86.18  Aligned_cols=55  Identities=16%  Similarity=0.166  Sum_probs=47.8

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCC--CCEEEEEee
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPD--GSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPD--Gn~IEI~e~   79 (137)
                      .++.+|+||.|+|+++++++|+++|+++...+.. +|  .+.+||+|||  |++|||++.
T Consensus       102 ~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~-~g--~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A          102 GEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDF-EG--GRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEE-TT--EEEEEESCHHHHSSEEEEEEE
T ss_pred             CceEEEEEEEcCCHHHHHHHHHHCCCcEeecccc-CC--eeEEEEeccccCcEEEEEEec
Confidence            4578899999999999999999999999876532 33  5899999999  999999985

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.14  E-value=1.7e-10  Score=81.49  Aligned_cols=53  Identities=21%  Similarity=0.325  Sum_probs=44.8

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEE-EEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQL-FFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~v-Ff~DPDGn~IEI~e~~   80 (137)
                      .++..|++|.|+|+++++++|+++|+++...    .|  .+.+ ||+|||||.|||.+..
T Consensus        75 ~~~~~h~~f~v~d~~~~~~~l~~~G~~~~~~----~g--~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           75 DEAYGHIAIGVEDVKELVADMRKHDVPIDYE----DE--SGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             CSSEEEEEEEESCHHHHHHHHHHTTCCEEEE----CS--SSSEEEEECTTSCEEEEEEHH
T ss_pred             CCCceEEEEEeCCHHHHHHHHHHCCCEEecc----CC--cEEEEEEECCCCCEEEEEEcC
Confidence            3467899999999999999999999998865    23  2455 9999999999999754

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.14  E-value=3.5e-10  Score=78.98  Aligned_cols=53  Identities=13%  Similarity=0.118  Sum_probs=46.2

Q ss_pred             eEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           27 HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        27 HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      |++|.|+|+++++++|+++|+++...+... .+|.+.+||+|||||.|||++..
T Consensus        71 ~~~~~v~dv~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           71 QVIVWVSDVDEHFMRSTAAGADIVQPLQDK-PWGLRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCEEEEEEEEE-TTTEEEEEEECSSSCEEEEEECC
T ss_pred             EEEEEeCCHHHHHHHHHHcCCeeccCcccc-CCCcEEEEEECCCCCEEEEEEEc
Confidence            999999999999999999999998766432 23469999999999999999864

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.13  E-value=1.5e-10  Score=81.49  Aligned_cols=56  Identities=18%  Similarity=0.291  Sum_probs=44.0

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcE-EeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKEMKID-YVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~-~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +..|++|.|+|+++++++|+++|++ +...+... .+|.+ +||+|||||+|||.+.+.
T Consensus        66 ~~~~l~f~v~dvd~~~~~l~~~G~~~~~~~p~~~-~~G~~-~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           66 PSLQLGFQITDLEKTVQELVKIPGAMCILDPTDM-PDGKK-AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             CSEEEEEEESCHHHHHHHHTTSTTCEEEEEEEEC-C-CEE-EEEECTTCCEEEEEC---
T ss_pred             CceEEEEEeCCHHHHHHHHHHCCCceeccCceeC-CCccE-EEEECCCCCEEEEEEecc
Confidence            3467999999999999999999999 77655332 24456 999999999999998765

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.13  E-value=2.1e-10  Score=82.82  Aligned_cols=54  Identities=15%  Similarity=0.331  Sum_probs=46.4

Q ss_pred             ceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           26 NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        26 ~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .|++|.|+|+++++++|+++|+++...+....+++ +.+||+|||||+|||.+..
T Consensus        92 ~~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           92 PVVTVDVESIESALERIESLGGKTVTGRTPVGNMG-FAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             CEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTE-EEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHHHHcCCeEecCCeecCCCE-EEEEEECCCCCEEEEEecC
Confidence            49999999999999999999999987654333344 8999999999999999864

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.12  E-value=1.4e-10  Score=80.90  Aligned_cols=56  Identities=23%  Similarity=0.353  Sum_probs=46.4

Q ss_pred             CCCCceEEEEe---CCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~V---edId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .++..|++|.|   +|+++++++|+++|+++.... . ..+| +.+||+|||||+|||.+..
T Consensus        70 ~~g~~h~~f~v~~~~d~~~~~~~l~~~G~~~~~~~-~-~~~g-~~~~~~DPdG~~iel~~~~  128 (136)
T 2rk0_A           70 RPGLDHLSFSVESMTDLDVLEERLAKAGAAFTPTQ-E-LPFG-WILAFRDADNIALEAMLGR  128 (136)
T ss_dssp             SSEEEEEEEEESSHHHHHHHHHHHHHHTCCBCCCE-E-ETTE-EEEEEECTTCCEEEEEEEC
T ss_pred             CCCcceEEEEeCCHHHHHHHHHHHHHCCCcccCcc-c-cCCc-eEEEEECCCCCEEEEEEcC
Confidence            34678999999   899999999999999987432 2 2345 8999999999999999764

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.12  E-value=4.7e-10  Score=79.95  Aligned_cols=58  Identities=24%  Similarity=0.426  Sum_probs=46.3

Q ss_pred             CCCCceEEEEeC-CHHHHHHHHHHCCcEEeeecccc-CCc-eEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCE-NMAIVERRLKEMKIDYVKSRVEE-GGI-NVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~Ve-dId~v~~rLke~GI~~~~~~~~~-~g~-g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .++..|++|.+. |+++++++|+++|+++...+... +.. +.+.+||+|||||+|||+++
T Consensus        87 ~~g~~~~~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A           87 VPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             CTTCCEEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             CCCCceEEEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            446789999986 99999999999999988655321 111 24789999999999999875

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.11  E-value=1e-10  Score=79.65  Aligned_cols=54  Identities=17%  Similarity=0.313  Sum_probs=45.5

Q ss_pred             CceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           25 DNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        25 ~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ..|++|.|+|+++++++|+++|+++...+... .+|.+.+||+|||||.|||.+.
T Consensus        64 ~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           64 GIIIHIEVEDVDQNYKRLNELGIKVLHGPTVT-DWGTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             CEEEEEECSCHHHHHHHHHHHTCCEEEEEEEC-TTSCEEEEEECGGGCEEEEEEC
T ss_pred             eEEEEEEECCHHHHHHHHHHCCCceecCCccc-cCccEEEEEECCCccEEEEEec
Confidence            34899999999999999999999987665432 2346899999999999999874

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.11  E-value=4.1e-10  Score=79.14  Aligned_cols=57  Identities=12%  Similarity=0.118  Sum_probs=44.0

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCc----EEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKEMKI----DYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI----~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +..|++|.|+|+++++++|+++|+    ++...+.. ..+|.+.+||+|||||.|||.+...
T Consensus        66 ~~~~l~~~v~dv~~~~~~l~~~g~~~g~~i~~~~~~-~~~g~~~~~~~DPdG~~iel~~~~~  126 (134)
T 3fcd_A           66 ARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKN-MPYGQREFQVRMPDGDWLNFTAPLA  126 (134)
T ss_dssp             --EEEEEECSCHHHHHHHHHHHHTTSCGGGEEEEEE-CTTSEEEEEEECTTSCEEEEEEECC
T ss_pred             ceEEEEEEeCCHHHHHHHHHhcCCccCCccccCCcc-cCCCcEEEEEECCCCCEEEEEEccc
Confidence            446999999999999999997665    34444322 2345799999999999999998764

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.10  E-value=3e-10  Score=81.08  Aligned_cols=60  Identities=18%  Similarity=0.190  Sum_probs=49.1

Q ss_pred             CCCCceEEEEe---CCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCC
Q 032616           22 NPKDNHISFQC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL   82 (137)
Q Consensus        22 np~~~HIAF~V---edId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~   82 (137)
                      .++..|++|.|   +|+++++++|+++|+++...+... .+|.+.+||+|||||.|||.+....
T Consensus        67 ~~~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~~~~  129 (150)
T 3bqx_A           67 RPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAP-PHGGLRGYVADPDGHIWEIAFNPVW  129 (150)
T ss_dssp             SCCSCEEEEECSSGGGHHHHHHHHHHTTCEEEEEEECC-TTSSEEEEEECTTCCEEEEEECTTS
T ss_pred             CCCeEEEEEEeCCHHHHHHHHHHHHHCCCEEecCCccc-CCCCEEEEEECCCCCEEEEEeCCCc
Confidence            34677999999   899999999999999998765332 2235899999999999999987543

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.08  E-value=6.3e-10  Score=77.10  Aligned_cols=59  Identities=14%  Similarity=0.179  Sum_probs=47.2

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeeecccc--C-CceEEEEEEEcCCCCEEEEEeecC
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEE--G-GINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~--~-g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      .+..|++|.++   |+++++++|+++|+++...+...  + ..+.+.+||+|||||+|||.++.+
T Consensus        66 ~~~~h~~~~~~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~  130 (135)
T 3rri_A           66 MYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFD  130 (135)
T ss_dssp             SSSCEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESS
T ss_pred             CCCCeEEEEEcChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECC
Confidence            35679999996   59999999999999997765331  1 122578999999999999998864

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.07  E-value=4.3e-10  Score=77.58  Aligned_cols=58  Identities=22%  Similarity=0.385  Sum_probs=47.2

Q ss_pred             CCCCceEEEEeC--CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~Ve--dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .++..|++|.|+  |+++++++|+++|+++...+....+ +.+.+||+|||||+|||.+..
T Consensus        64 ~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           64 ERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQG-EGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             CCCSCEEEEECCGGGHHHHHHHHHHHTCCEECCCCCCTT-CCCEEEEECSSSCEEEEECSS
T ss_pred             CCCeeEEEEEcCHHHHHHHHHHHHHCCCcccCCCccCCC-CeeEEEEECCCCCEEEEEcCC
Confidence            346789999994  9999999999999999876532211 247999999999999999753

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.07  E-value=1.9e-10  Score=80.26  Aligned_cols=56  Identities=14%  Similarity=0.278  Sum_probs=46.3

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .+..|++|.|+|+++++++|++ |+++...+... .+|.+.+||+|||||.|||.+..
T Consensus        73 ~~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           73 RRNMLLYFEHADVDAAFQDIAP-HVELIHPLERQ-AWGQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             CSSCEEEEEESCHHHHHC-CGG-GSCEEEEEEEC-TTSCEEEEEECTTCCEEEEEECC
T ss_pred             CCceEEEEEeCcHHHHHHHHHc-CCccccCCccC-CCCCEEEEEECCCCCEEEEEecc
Confidence            4678999999999999999999 99988765432 23468999999999999999864

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.07  E-value=2.6e-10  Score=81.75  Aligned_cols=56  Identities=27%  Similarity=0.395  Sum_probs=45.9

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeee-ccc-cCCceEEEEEEEcCCCCEEEEEe
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKS-RVE-EGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~-~~~-~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      ++..|++|.|+   |+++++++|+++|+++... +.+ ..+.+.+.+||+|||||+|||++
T Consensus        85 ~g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~  145 (146)
T 3ct8_A           85 TGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVA  145 (146)
T ss_dssp             SSCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEEC
T ss_pred             CCceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEe
Confidence            46689999999   8999999999999999873 322 12334589999999999999985

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.07  E-value=4e-10  Score=78.02  Aligned_cols=55  Identities=11%  Similarity=0.184  Sum_probs=45.8

Q ss_pred             CCceEEEEeCCHHHHHHHHHHC------Cc--EEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           24 KDNHISFQCENMAIVERRLKEM------KI--DYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~------GI--~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      +..|++|.|+|+++++++|+++      |+  ++...+... .+| +.+||+|||||.|||.+..
T Consensus        60 ~~~~~~~~v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~-~~g-~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           60 DNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQ-PWG-REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             GGCEEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEE-TTE-EEEEEECTTCCEEEEEEC-
T ss_pred             CceEEEEEECCHHHHHHHHHHhcccccCCccccccCCceec-CCC-CEEEEECCCCCEEEEEEec
Confidence            3469999999999999999999      99  777665432 355 8999999999999998753

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.06  E-value=1e-09  Score=79.33  Aligned_cols=58  Identities=16%  Similarity=0.231  Sum_probs=46.9

Q ss_pred             CCCCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           22 NPKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        22 np~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      .++..|++|.|+|   +++++++|+++|+++...+... .+| +.+||+|||||+|||++...
T Consensus        65 ~~~~~~l~f~v~d~~dvd~~~~~l~~~G~~i~~~p~~~-~~G-~~~~~~DPdG~~iel~~~~~  125 (148)
T 3rhe_A           65 TGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQM-DFG-YTFVGVDPDEHRLRIFCLKR  125 (148)
T ss_dssp             ---CEEEEEECSCHHHHHHHHHHHHHTTCCEEEEEEEE-TTE-EEEEEECTTCCEEEEEEEC-
T ss_pred             CCCeEEEEEEcCCHHHHHHHHHHHHhCCCEEEeCCeec-CCC-cEEEEECCCCCEEEEEEcCh
Confidence            3457899999987   9999999999999998766433 345 89999999999999998753

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.06  E-value=3.5e-10  Score=79.35  Aligned_cols=57  Identities=21%  Similarity=0.353  Sum_probs=45.7

Q ss_pred             CCCCceEEEEeC--CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~Ve--dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .++..|++|.|+  |+++++++|+++|+++...+.... .+.+.+||+|||||.|||.+.
T Consensus        64 ~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~  122 (139)
T 1r9c_A           64 ERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVE-GEGRSIYFYDDDNHMFELHTG  122 (139)
T ss_dssp             SCCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             CCCeeEEEEEcCHHHHHHHHHHHHHCCCcccCCcccCC-CCeEEEEEECCCCCEEEEEeC
Confidence            346789999999  999999999999999886543221 235899999999999999864

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.06  E-value=3.4e-10  Score=80.55  Aligned_cols=55  Identities=22%  Similarity=0.412  Sum_probs=44.9

Q ss_pred             CCCceEEEEeC--CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           23 PKDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        23 p~~~HIAF~Ve--dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      .+..|++|.|+  |+++++++|+++|+++........ .+.+.+||+|||||+|||++
T Consensus        84 ~~~~h~~~~v~~~dld~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           84 WQQQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEW-MQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             CCCCEEEEEECGGGHHHHHHHHHHTTCCCEEEEEEGG-GTEEEEEEECTTCCEEEEEE
T ss_pred             CCCceEEEEEeHHHHHHHHHHHHHCCCeEeCCcccCC-CCceEEEEECCCCCEEEEEE
Confidence            35689999997  999999999999999984332221 12589999999999999985

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.05  E-value=8.6e-11  Score=81.85  Aligned_cols=57  Identities=16%  Similarity=0.274  Sum_probs=45.6

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEee-eccccCCceEEEEEE--EcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVK-SRVEEGGINVDQLFF--HDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~-~~~~~~g~g~r~vFf--~DPDGn~IEI~e~~   80 (137)
                      ++..|++|.|+|+++++++|+++|+++.. .+.. ...|.+.+||  +|||||+|||++..
T Consensus        87 ~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~-~~~g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           87 AGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKL-GTGGNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEE-CSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CceEEEEEECCCHHHHHHHHHHCCCeecCcCccc-CCCceEEEEEeecCCCcEEEEEEecC
Confidence            46789999999999999999999999883 3322 2223466777  99999999999864

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.05  E-value=1.1e-09  Score=76.90  Aligned_cols=55  Identities=20%  Similarity=0.387  Sum_probs=46.7

Q ss_pred             CCCCceEEEEeC--CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~Ve--dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .++..|++|.|+  |+++++++|+++|+++...+. . +  .+.+||+|||||+|||.+..
T Consensus        62 ~~~~~hi~~~v~~~d~~~~~~~l~~~G~~~~~~~~-~-~--~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           62 ESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNK-S-E--GASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             GSCSCEEEEECCHHHHHHHHHHHHHTTCCEEECCC-S-S--SEEEEEECTTCCEEEEEECC
T ss_pred             CCCceEEEEEeCHHHHHHHHHHHHHCCCeEeccCC-C-c--eeEEEEECCCCCEEEEEECc
Confidence            346789999997  999999999999999987553 2 2  38999999999999999764

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.05  E-value=1.3e-10  Score=84.40  Aligned_cols=61  Identities=15%  Similarity=0.291  Sum_probs=49.1

Q ss_pred             CCceEEEEe---CCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCCCCcccCC
Q 032616           24 KDNHISFQC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAG   89 (137)
Q Consensus        24 ~~~HIAF~V---edId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~p~~pl~~   89 (137)
                      +..|++|.|   +|+++++++|+++|+++...+...+|  .+.+||+|||||.|||++..   ..|+..
T Consensus        76 g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~g--~~~~~~~DPdG~~iel~~~~---~~~~d~  139 (160)
T 3r4q_A           76 GQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNG--SYSVYIRDPAGNSVEVGEGK---LWGFEA  139 (160)
T ss_dssp             EECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEECTTS--CEEEEEECTTCCEEEEEEGG---GGTCCC
T ss_pred             ceeEEEEEeCCHHHHHHHHHHHHHCCCEEeccccccCC--cEEEEEECCCCCEEEEEeCC---CCCccc
Confidence            568999999   89999999999999999865432223  58999999999999999863   344443

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.04  E-value=5.9e-10  Score=78.37  Aligned_cols=54  Identities=15%  Similarity=0.131  Sum_probs=45.7

Q ss_pred             ceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           26 NHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        26 ~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .|++|.|+   |+++++++|+++|+++...+... .+|.+.+||+|||||+|||.+..
T Consensus        77 ~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           77 FLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYET-YYHWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHHTTCEEEEEEEEC-TTSEEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHHHHHHHcCCeEecCcccc-CCccEEEEEECCCCCEEEEEEcc
Confidence            49999999   59999999999999988766432 23468999999999999999754

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.03  E-value=5.4e-10  Score=75.27  Aligned_cols=51  Identities=25%  Similarity=0.378  Sum_probs=42.8

Q ss_pred             CCCceEEEEe---CCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEE
Q 032616           23 PKDNHISFQC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC   77 (137)
Q Consensus        23 p~~~HIAF~V---edId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~   77 (137)
                      ++..|++|.|   +|+++++++|+++|+++.. +.. .+  .+.+||+|||||+|||+
T Consensus        59 ~~~~~~~~~v~~~~d~~~~~~~l~~~G~~~~~-p~~-~~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           59 PKTFHVGFPQESEEQVDKINQRLKEDGFLVEP-PKH-AH--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             CTTCCEEEECSSHHHHHHHHHHHHHTTCCCCC-CEE-C---CEEEEEEETTTEEEEEE
T ss_pred             CceeEEEEEcCCHHHHHHHHHHHHHCCCEEec-CcC-CC--cEEEEEECCCCcEEEEe
Confidence            4678999999   8899999999999999864 322 23  38999999999999996

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.03  E-value=5.2e-10  Score=77.22  Aligned_cols=54  Identities=7%  Similarity=0.123  Sum_probs=45.4

Q ss_pred             CCceEEEEeCCHHHHHHHHHHC------Cc--EEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           24 KDNHISFQCENMAIVERRLKEM------KI--DYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~------GI--~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ...|++|.|+|+++++++|+++      |+  ++...+... .+| +.+||+|||||.|||.+.
T Consensus        60 ~~~~~~~~v~dvd~~~~~l~~~~~~~~~G~~~~~~~~~~~~-~~g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           60 DNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGES-PAG-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             TTCEEEEEESCHHHHHHHHTTTSCSCTTCTTSCEECCCEEE-TTE-EEEEEECTTSCEEEEEEC
T ss_pred             CceEEEEEECCHHHHHHHHHhhccccccCccccccCCCcCC-CCC-cEEEEECCCCCEEEEecC
Confidence            3469999999999999999999      99  777655332 355 899999999999999874

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.02  E-value=1.4e-09  Score=77.94  Aligned_cols=56  Identities=11%  Similarity=0.162  Sum_probs=46.6

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++..|++|.|+   |+++++++|+++|+++...+... .+| +.+||+|||||.|||.+..
T Consensus        85 ~~~~hl~f~v~d~~dv~~~~~~l~~~G~~~~~~~~~~-~~g-~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           85 GGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKM-EFG-YTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             SSSCEEEEECSSHHHHHHHHHHHHHTTCCCCSCCEEE-TTE-EEEEECCTTCCEEEEEEEC
T ss_pred             CCceEEEEEeCCHHHHHHHHHHHHHCCCeEecCceec-CCc-eEEEEECCCCCEEEEEecC
Confidence            46789999997   58999999999999988765432 244 8999999999999998753

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.01  E-value=8.6e-10  Score=76.99  Aligned_cols=56  Identities=23%  Similarity=0.354  Sum_probs=47.0

Q ss_pred             CCCCceEEEEeC--CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           22 NPKDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        22 np~~~HIAF~Ve--dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      .++..|++|.|+  |+++++++|+++|+++...+.. +   .+.+||+|||||.|||.+...
T Consensus        59 ~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~-~---~~~~~~~DPdG~~iel~~~~~  116 (135)
T 1nki_A           59 AADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS-E---GDSFYFLDPDGHRLEAHVGDL  116 (135)
T ss_dssp             CSSSCEEEEEECHHHHHHHHHHHHHTTCCEEECCCS-S---SCEEEEECTTCCEEEEESCCH
T ss_pred             CCCcceEEEEccHHHHHHHHHHHHHCCCceecCCCC-C---eEEEEEECCCCCEEEEEECCc
Confidence            346789999998  9999999999999999875532 2   379999999999999997543

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=98.99  E-value=2.1e-09  Score=75.30  Aligned_cols=53  Identities=26%  Similarity=0.308  Sum_probs=42.2

Q ss_pred             CCCceEEEEeCCH---HHHHHHHHHCCcEEee--eccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCENM---AIVERRLKEMKIDYVK--SRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~VedI---d~v~~rLke~GI~~~~--~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .+..|++|.|+|+   ++++++|+++|+++..  .+.. ...+   .||+|||||+|||.+.
T Consensus        76 ~~~~hi~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~-~~~g---~~~~DPdG~~iel~~~  133 (139)
T 1twu_A           76 HPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYW-SNGG---VTIEDPDGWRIVFMNS  133 (139)
T ss_dssp             CTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHH-HSSE---EEEECTTCCEEEEESS
T ss_pred             CCccEEEEEeCCcchHHHHHHHHHHcCCcCcCCCCccc-CCCC---eEEECCCCCEEEEEEc
Confidence            3568999999999   9999999999999883  2221 1222   3799999999999974

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=98.98  E-value=1e-09  Score=77.63  Aligned_cols=56  Identities=13%  Similarity=0.201  Sum_probs=45.2

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeecccc------CCceEEEEEEEcCCCCEEEEEeec
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEE------GGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~------~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      +. +++|.|+|+++++++|++ +|+++...+...      .+.+.+.+||+|||||+|||++..
T Consensus        74 g~-~~~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           74 GV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             TE-EEEEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC-
T ss_pred             ce-EEEEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcC
Confidence            44 499999999999999999 999988765320      223468999999999999999754

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=98.95  E-value=1.7e-09  Score=76.87  Aligned_cols=50  Identities=14%  Similarity=0.238  Sum_probs=42.1

Q ss_pred             EE-EeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           29 SF-QCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        29 AF-~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      +| .|+|+++++++|+++|+++...+... .+|.+.+||+|||||.|||.+.
T Consensus        94 ~~~~v~dvd~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~iel~~~  144 (148)
T 3bt3_A           94 GFMMIEGIDALHKYVKENGWDQISDIYTQ-PWGARECSITTTDGCILRFFES  144 (148)
T ss_dssp             EEEEEECHHHHHHHHHHTTCCCBCCCEEE-TTTEEEEEEECTTSCEEEEEEE
T ss_pred             EEEEcCCHHHHHHHHHHcCCccccCcccC-CCccEEEEEECCCCCEEEEeee
Confidence            65 99999999999999999987765332 2446899999999999999875

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=98.86  E-value=5e-09  Score=82.24  Aligned_cols=58  Identities=14%  Similarity=0.046  Sum_probs=45.1

Q ss_pred             CCCceEEEEeCCHHH---HHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~VedId~---v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++.+|+||.|+|+++   ++++|+++|+++...+...+..+.+.+||+|||||+|||++..
T Consensus       211 ~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          211 SGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             SSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             CCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            457899999999666   5999999999998754321111147899999999999999643

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=98.82  E-value=1.8e-08  Score=82.64  Aligned_cols=54  Identities=30%  Similarity=0.474  Sum_probs=46.5

Q ss_pred             CCceEEEEeC--CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~Ve--dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +..|+||.|+  |+++++++|+++|+++..  ....+  .+.+||+|||||.|||++...
T Consensus        79 ~~~hiaf~V~~~dl~~~~~rL~~~Gv~~~~--~~~~g--~~~~~f~DPdGn~iEl~~~~~  134 (335)
T 3oaj_A           79 QVGVTSYVVPKGAMAFWEKRLEKFNVPYTK--IERFG--EQYVEFDDPHGLHLEIVEREE  134 (335)
T ss_dssp             EEEEEEEEECTTCHHHHHHHHHHTTCCCEE--EEETT--EEEEEEECTTSCEEEEEECSC
T ss_pred             ceEEEEEEecHHHHHHHHHHHHhCcceeee--eccCC--cEEEEEECCCCCEEEEEEeCC
Confidence            5789999999  999999999999999985  23233  589999999999999998653

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=98.81  E-value=1.1e-08  Score=80.85  Aligned_cols=58  Identities=14%  Similarity=0.182  Sum_probs=44.8

Q ss_pred             CCCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++.+|+||.|+|   +++++++|+++|+++...+...+..+.+++||+|||||+|||++..
T Consensus       208 ~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          208 KRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             SSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             CCceEEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            467899999998   5667889999999988654322111146899999999999998743

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=98.79  E-value=1.3e-08  Score=82.67  Aligned_cols=60  Identities=17%  Similarity=0.222  Sum_probs=47.2

Q ss_pred             CCCCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           22 NPKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        22 np~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      .++.+|+||.|+|   +++++++|+++|+++...+...+..+.+++||+|||||+||++....
T Consensus       213 ~~~~~Hiaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~  275 (339)
T 3lm4_A          213 HGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAG  275 (339)
T ss_dssp             CSEEEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCC
T ss_pred             CCceeEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCC
Confidence            3468999999999   88888999999999886653211112578999999999999986543

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=98.78  E-value=1.6e-08  Score=82.98  Aligned_cols=53  Identities=11%  Similarity=0.219  Sum_probs=42.9

Q ss_pred             CCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           24 KDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      +.+|+||.|+|   ++++.++|+++|+++... ...+.  .+++||+|||||+|||.+.
T Consensus       215 ~~~HiAf~v~d~~~l~~~~~~L~~~G~~~~~~-~~r~~--~~siYfrDP~G~~iEl~td  270 (335)
T 3oaj_A          215 TVHHIAWRANDDEDQLDWQRYIASHGYGVTPV-RDRNY--FNAIYFREHGEILFEIATD  270 (335)
T ss_dssp             EEEEEEEEESSHHHHHHHHHHHHHTTCCCCCC-EECSS--SEEEEEECTTSCEEEEEES
T ss_pred             ceEEEEEEcCCHHHHHHHHHHHHHCCCCcccc-ccCCc--EEEEEEECCCCcEEEEEeC
Confidence            58899999998   667899999999986533 23222  4799999999999999864

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=98.77  E-value=1.1e-08  Score=81.99  Aligned_cols=57  Identities=25%  Similarity=0.411  Sum_probs=45.2

Q ss_pred             CCCceEEEEeCCHHH---HHHHHHHCCc--EEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCENMAI---VERRLKEMKI--DYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~VedId~---v~~rLke~GI--~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ++.+|++|.|+|+++   ++++|+++|+  ++...+......+..++||+|||||+||+...
T Consensus       210 ~~~~Hiaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (323)
T 1f1u_A          210 PRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  271 (323)
T ss_dssp             SEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             CCceEEEEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeC
Confidence            378999999999998   9999999999  88754422111124789999999999999854

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=98.77  E-value=1.6e-08  Score=79.92  Aligned_cols=57  Identities=16%  Similarity=0.136  Sum_probs=44.1

Q ss_pred             CCCceEEEEeCCHHH---HHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~VedId~---v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ++.+|+||.|+|+++   ++++|+++|+++...+...+..+.+.+||+|||||+|||+..
T Consensus       211 ~~~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (302)
T 2ehz_A          211 KRLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWR  270 (302)
T ss_dssp             SSEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             CceeEEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEEC
Confidence            467899999998775   567999999998865532211114789999999999999865

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=98.76  E-value=1e-08  Score=81.08  Aligned_cols=56  Identities=18%  Similarity=0.168  Sum_probs=43.8

Q ss_pred             CCceEEEEeCCHHH---HHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           24 KDNHISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF~VedId~---v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      +.+|+||.|+|+++   ++++|+++|+++...+...+..+.+++||+|||||+|||...
T Consensus       213 ~~~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (309)
T 3hpy_A          213 KLHHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMG  271 (309)
T ss_dssp             EEEEEEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEE
T ss_pred             ceeEEEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeC
Confidence            48999999998765   568999999998765432111125799999999999999876

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=98.75  E-value=2e-08  Score=80.83  Aligned_cols=55  Identities=16%  Similarity=0.317  Sum_probs=45.7

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .+..|++|.|+   |+++++++|+++|+++. .+...++  .+.+||+|||||.|||++..
T Consensus       242 ~~~~hiaf~v~~~~dv~~~~~~l~~~G~~~~-~~~~~~~--~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          242 GSIHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDRFY--FKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             TCEEEEEEEESSHHHHHHHHHHHHHTTCCCC-CCEECSS--EEEEEEECTTCCEEEEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHHHCCCcee-eeeecCc--eEEEEEECCCCCEEEEEEcC
Confidence            35789999999   69999999999999985 4433333  58999999999999999864

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=98.75  E-value=1.8e-08  Score=78.90  Aligned_cols=57  Identities=11%  Similarity=0.096  Sum_probs=44.7

Q ss_pred             CCCceEEEEeCCHHHHH---HHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCENMAIVE---RRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~VedId~v~---~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++.+|++|.|+|++++.   ++ +++|+++...+...+.-..+++||+|||||+|||++..
T Consensus       205 ~~~~hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          205 KRIHHFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             SSEEEEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             CCceEEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            46789999999988877   88 99999998765322111146799999999999999754

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=98.75  E-value=3.1e-08  Score=79.74  Aligned_cols=56  Identities=11%  Similarity=0.159  Sum_probs=47.2

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ++..|++|.|+   |+++++++|+++|+++...+. ..|  .+.+||+|||||.|||++...
T Consensus       100 ~~~~hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~-~~G--~~~~~f~DPdG~~iel~~~~~  158 (338)
T 1zsw_A          100 NAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTT-YAN--RPALQFEDAEGLRLVLLVSNG  158 (338)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEE-ETT--EEEEEEECTTCCEEEEEECTT
T ss_pred             CCeeeEEEEcCCHHHHHHHHHHHHHCCCccccccc-cCC--cEEEEEECCCCCEEEEEEcCC
Confidence            35789999998   699999999999999886543 234  589999999999999998764

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=98.73  E-value=1.4e-08  Score=79.85  Aligned_cols=56  Identities=18%  Similarity=0.261  Sum_probs=44.5

Q ss_pred             CceEEEEeC---CHHHHHHHHHHCCcEEeeeccccC-CceEEEEEEEcCCCCEEEEEeecC
Q 032616           25 DNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEG-GINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        25 ~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~-g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ..|++|.|+   ++++++++|+++|+++...+...+ +. .+++||+|||||+|||.+...
T Consensus       212 ~~hi~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~-~~~~~~~DPdG~~iel~~~~~  271 (307)
T 1mpy_A          212 LHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTH-GKTIYFFDPSGNRNEVFCGGD  271 (307)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTT-CEEEEEECTTSCEEEEEECCC
T ss_pred             ceEEEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCC-ceEEEEECCCCcEEEEEeccc
Confidence            689999999   466778999999999876553321 11 378999999999999998654

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=98.72  E-value=1.6e-08  Score=80.92  Aligned_cols=57  Identities=25%  Similarity=0.272  Sum_probs=45.9

Q ss_pred             CCCceEEEEeCCHHHH---HHHHHHCCcEEeeecccc-CCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCENMAIV---ERRLKEMKIDYVKSRVEE-GGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~VedId~v---~~rLke~GI~~~~~~~~~-~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++.+|++|.|+|++++   +++|+++|+++...+... .+ +.+++||+|||||+||+.+..
T Consensus       194 ~g~~hi~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~-~~~~~y~~DPdG~~iE~~~~~  254 (310)
T 3b59_A          194 PCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAG-NNTFSYFVTPGGFVTEYTSEL  254 (310)
T ss_dssp             SEEEEEEEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTT-CCEEEEEECTTSCEEEEEECC
T ss_pred             CceEEEEEEcCCHHHHHHHHHHHHHcCCceeecCccccCC-CcEEEEEECCCCCEEEEEeCc
Confidence            5789999999998877   999999999988654321 12 147899999999999998743

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=98.69  E-value=3.6e-08  Score=76.06  Aligned_cols=54  Identities=9%  Similarity=0.136  Sum_probs=46.2

Q ss_pred             CceEEEEeC-CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           25 DNHISFQCE-NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        25 ~~HIAF~Ve-dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ..+++|.|+ |+++++++|+++|+++...+... .+|.+.+||+|||||.|||.++
T Consensus       246 ~~~~~~~v~~dvd~~~~~~~~~G~~~~~~~~~~-~~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          246 PVRLHLDAAGTADSLHRRAVDAGARVDGPPVRR-PWGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             CCEEEEEEESCHHHHHHHHHHTTCCEEEEEEEC-TTSCEEEEEECTTSCEEEEEEC
T ss_pred             ceEEEEEcCccHHHHHHHHHHcCCccccCcccC-CCcceEEEEECCCCCEEEeeCC
Confidence            458999999 99999999999999998776443 2446899999999999999874

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=98.69  E-value=6.9e-08  Score=76.63  Aligned_cols=56  Identities=9%  Similarity=0.162  Sum_probs=47.7

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ...|++|.|+|+++++++|+++|+++...+...+ .+.+.+||+|||||.|||++..
T Consensus       224 ~~~~~~~~v~dvd~~~~~~~~~G~~~~~~p~~~~-~~~~~~~~~DPdGn~~~l~~~~  279 (282)
T 3oxh_A          224 NHWHVYFAVDDADATAAKAAAAGGQVIAEPADIP-SVGRFAVLSDPQGAIFSVLKAA  279 (282)
T ss_dssp             SEEEEEEECSCHHHHHHHHHHTTCEEEEEEEEET-TTEEEEEEECTTSCEEEEEEEC
T ss_pred             CeEEEEEEeCCHHHHHHHHHHcCCEEecCCeEcC-CCeEEEEEECCCCCEEEEEecC
Confidence            4569999999999999999999999987764332 2358999999999999999875

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=98.67  E-value=6.9e-08  Score=78.49  Aligned_cols=58  Identities=22%  Similarity=0.358  Sum_probs=46.7

Q ss_pred             CCCceEEEEeC--CHHHHHHHHHHCCcEEeeecccc---CCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEE---GGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~Ve--dId~v~~rLke~GI~~~~~~~~~---~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++..|++|.|+  |+++++++|+++|+++...+...   +..+.+.+||+|||||+|||++..
T Consensus       219 ~~~~hiaf~v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~  281 (330)
T 3zi1_A          219 AAFGRIAFSCPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDE  281 (330)
T ss_dssp             TTCCEEEEEECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHH
T ss_pred             CCCceEEEEEEcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEec
Confidence            45679999995  79999999999999987665321   112368999999999999999853

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=98.64  E-value=3.7e-08  Score=77.92  Aligned_cols=59  Identities=14%  Similarity=0.207  Sum_probs=47.4

Q ss_pred             CCCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           23 PKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        23 p~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ++..|++|.|++   +++++++|+++|+++...+......+.+.+||+|||||.|||+....
T Consensus        64 ~~~~h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~  125 (309)
T 3hpy_A           64 AGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKT  125 (309)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             CceeEEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccc
Confidence            467899999986   99999999999999987653211122489999999999999998654

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=98.62  E-value=8.1e-08  Score=76.22  Aligned_cols=64  Identities=13%  Similarity=0.142  Sum_probs=51.7

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCCCCccc
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPL   87 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~p~~pl   87 (137)
                      +..-+++|.|+|+++++++|+++|+++...+....+. .+.+||+|||||.|||++....+..+.
T Consensus        95 ~~~~~~~~~v~d~d~~~~~l~~~G~~~~~~p~~~~~~-g~~~~~~DP~G~~i~l~~~~~~~~~~~  158 (282)
T 3oxh_A           95 PPIWNTYIAVDDVDAVVDKVVPGGGQVMMPAFDIGDA-GRMSFITDPTGAAVGLWQANRHIGATL  158 (282)
T ss_dssp             CCEEEEEEECSCHHHHHTTTTTTTCEEEEEEEEETTT-EEEEEEECTTCCEEEEEEESSCCSCSB
T ss_pred             CCcEEEEEEeCCHHHHHHHHHHCCCEEEECCEecCCC-eEEEEEECCCCCEEEEEEccccCCccc
Confidence            3456899999999999999999999998776543333 389999999999999999876444433

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=98.60  E-value=5.2e-08  Score=76.13  Aligned_cols=57  Identities=11%  Similarity=0.014  Sum_probs=42.9

Q ss_pred             CCCceEEEEeCCHHH---HHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCC-EEEEEeec
Q 032616           23 PKDNHISFQCENMAI---VERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS-MIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~VedId~---v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn-~IEI~e~~   80 (137)
                      ++.+|+||.|+|+++   .+++|+ +|+++...+...+..+.+++||+||||| +|||++..
T Consensus       205 ~~~~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          205 KRIHHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             SSEEEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             CceEEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            467899999998765   567999 9999876542211111468999999999 99998754

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=98.58  E-value=3.5e-08  Score=77.62  Aligned_cols=58  Identities=17%  Similarity=0.241  Sum_probs=46.8

Q ss_pred             CCCceEEEEe---CCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~V---edId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++..|++|.|   +|+++++++|+++|+++...+......+.+.+||+|||||.|||++..
T Consensus        63 ~~~~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (307)
T 1mpy_A           63 PGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADK  123 (307)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             CCcceEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcc
Confidence            4678999999   799999999999999988765311111248999999999999999854

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=98.58  E-value=7.7e-08  Score=75.32  Aligned_cols=57  Identities=19%  Similarity=0.258  Sum_probs=46.9

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccc----cCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVE----EGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~----~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ++..|++|.|+   |+++++++|+++|+++...+..    .++  .+.+||+|||||.|||++...
T Consensus        57 ~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~  120 (297)
T 1lgt_A           57 DDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGV--TGLITFADPFGLPLEIYYGAS  120 (297)
T ss_dssp             CEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTC--SEEEEEECTTSCEEEEEECCC
T ss_pred             CCccEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCccccccCCc--eeEEEEECCCCCEEEEEECcc
Confidence            45789999998   9999999999999998765432    122  489999999999999998653

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=98.54  E-value=8e-08  Score=75.05  Aligned_cols=57  Identities=12%  Similarity=0.219  Sum_probs=46.7

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccc----cCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVE----EGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~----~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ++..|++|.|+   |+++++++|+++|+++...+..    .++  .+.+||+|||||.|||++...
T Consensus        57 ~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~  120 (292)
T 1kw3_B           57 DDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKV--MGLLCLQDPFGLPLEIYYGPA  120 (292)
T ss_dssp             CEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTC--SEEEEEECTTSCEEEEEECCC
T ss_pred             CCccEEEEEECCHHHHHHHHHHHHHcCCeEeecCcccccccCc--eEEEEEECCCCCEEEEEECcc
Confidence            35689999998   8999999999999998865531    122  478999999999999998643

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=98.52  E-value=1.5e-07  Score=69.59  Aligned_cols=53  Identities=8%  Similarity=-0.078  Sum_probs=42.8

Q ss_pred             ceEEEEeCCHHHHHHHHHHCCcEEeeeccccC-CceEEEEEEEcCCCCEEEEEeec
Q 032616           26 NHISFQCENMAIVERRLKEMKIDYVKSRVEEG-GINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        26 ~HIAF~VedId~v~~rLke~GI~~~~~~~~~~-g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .|++|.|+|+++++++|+++|++ ...+.... .+ .+.++|+||+||.|+|++..
T Consensus       103 ~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~-~r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          103 VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL-GFKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT-TEEEEEECTTSCEEEEEC--
T ss_pred             EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc-cEEEEEECCCCCEEEEEeec
Confidence            49999999999999999999999 76653220 12 48999999999999999764

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=98.50  E-value=1.5e-07  Score=73.79  Aligned_cols=55  Identities=18%  Similarity=0.350  Sum_probs=45.0

Q ss_pred             CCCceEEEEeCC---HHHHHHHHHHCCcEEeeeccc----cCCceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVE----EGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~----~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ++..|++|.|++   +++++++|+++|+++...+..    .++  .+.+||+|||||.|||++.
T Consensus        59 ~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           59 DRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRV--DEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             CEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTC--SEEEEEECTTCCEEEEEEC
T ss_pred             CCcceEEEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccc--eEEEEEECCCCCEEEEEEc
Confidence            456799999975   899999999999998765432    122  4899999999999999986

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=98.49  E-value=1.9e-07  Score=75.76  Aligned_cols=57  Identities=14%  Similarity=0.199  Sum_probs=46.9

Q ss_pred             CCCCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .++..|++|.|+|   +++++++|+++|+++...+... +. .+.+||+|||||.|||+...
T Consensus        65 ~~g~~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~~-~~-~~~~~f~DPdG~~iel~~~~  124 (339)
T 3lm4_A           65 EAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQF-GY-GKTFEYQSPDGHNLQLLWEA  124 (339)
T ss_dssp             SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEECCST-TB-CCEEEEECTTCCEEEEECCB
T ss_pred             CCCcceEEEEeCCHHHHHHHHHHHHHCCCceeeccCCC-Cc-eEEEEEECCCCCEEEEEEee
Confidence            3468899999997   9999999999999998765322 22 48999999999999998653

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=98.47  E-value=1.6e-07  Score=74.12  Aligned_cols=56  Identities=18%  Similarity=0.251  Sum_probs=46.1

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeeecccc---CCceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEE---GGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~---~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ++..|++|.|+   |+++++++|+++|+++...+...   .+ +.+.+||+|||||.|||++.
T Consensus        60 ~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~-~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           60 DDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERR-VLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             CEEEEEEEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTT-EEEEEEEECTTCCEEEEEEE
T ss_pred             CCeEEEEEEECCHHHHHHHHHHHHHCCCceEeCCcccccccC-cEEEEEEECCCCCEEEEEEC
Confidence            45789999997   69999999999999988655321   22 25899999999999999976

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=98.44  E-value=2.1e-07  Score=74.63  Aligned_cols=59  Identities=14%  Similarity=0.041  Sum_probs=47.3

Q ss_pred             CCCceEEEEe---CCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           23 PKDNHISFQC---ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        23 p~~~HIAF~V---edId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ++..|++|.|   +|+++++++|+++|+++...+......+.+.+||.|||||.|||++...
T Consensus        72 ~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~~  133 (323)
T 1f1u_A           72 AAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETE  133 (323)
T ss_dssp             CEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             CCeeEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEecc
Confidence            4578999999   7899999999999999987654111112478999999999999998644

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=98.43  E-value=6e-07  Score=71.37  Aligned_cols=58  Identities=16%  Similarity=0.181  Sum_probs=45.7

Q ss_pred             CCceEEEEeC--CHHHHHHHHHHCCcEEeee-ccc---cCCceEEEEEEEcCCCCEEEEEeecCC
Q 032616           24 KDNHISFQCE--NMAIVERRLKEMKIDYVKS-RVE---EGGINVDQLFFHDPDGSMIEICNCDVL   82 (137)
Q Consensus        24 ~~~HIAF~Ve--dId~v~~rLke~GI~~~~~-~~~---~~g~g~r~vFf~DPDGn~IEI~e~~~~   82 (137)
                      +..|+||.|+  ++++++++|+++ +++... +..   ...++.+.+||+|||||.|||++....
T Consensus        80 ~~~hiaf~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~~  143 (252)
T 3pkv_A           80 PFYHIAINIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQA  143 (252)
T ss_dssp             CCCEEEEEECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESSS
T ss_pred             CeeEEEEEecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCCC
Confidence            5789999985  699999999999 998652 111   012346999999999999999997654

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=98.40  E-value=2.4e-07  Score=73.11  Aligned_cols=58  Identities=12%  Similarity=0.131  Sum_probs=45.6

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccccC--CceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEEG--GINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~~--g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++..|++|.|.   |+++++++|+++|+++...+....  ..+.+.+||+|||||.|||++..
T Consensus        63 ~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  125 (302)
T 2ehz_A           63 DDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGP  125 (302)
T ss_dssp             SEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEE
T ss_pred             CCeeEEEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECC
Confidence            35789999995   699999999999999876543210  01258999999999999999763

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=98.39  E-value=8.6e-08  Score=77.99  Aligned_cols=57  Identities=18%  Similarity=0.311  Sum_probs=45.4

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccc---c-------CC--ce----EEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVE---E-------GG--IN----VDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~---~-------~g--~g----~r~vFf~DPDGn~IEI~e~   79 (137)
                      ++.+||||.|+|+++++++|+++|+++...+..   .       .+  ++    ...+|++||||++|||++.
T Consensus       237 ~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~  309 (357)
T 2r5v_A          237 AGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTA  309 (357)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBC
T ss_pred             CCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEcc
Confidence            578999999999999999999999998876411   0       00  00    1379999999999999975

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.30  E-value=2.5e-06  Score=60.46  Aligned_cols=52  Identities=12%  Similarity=0.073  Sum_probs=44.1

Q ss_pred             ceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           26 NHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        26 ~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      -.++|.|+|   +|+++++|+ .|.++..++.. ..+|.+..+|+||+|+.++|...
T Consensus        80 ~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~-~~~G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           80 FSFFVDCESNAQIERLAEALS-DGGKALMPLGD-YGFSQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EEEEEECCCHHHHHHHHHHHH-TTSEEEEEEEC-CSSSSEEEEEECTTSCEEEEEEC
T ss_pred             eEEEEEcCCHHHHHHHHHHHH-cCCEEeccccc-CCCcceEEEEECCCCCEEEEEec
Confidence            479999999   999999999 99999887643 33556889999999999999863

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=98.30  E-value=5.1e-07  Score=72.08  Aligned_cols=59  Identities=10%  Similarity=0.125  Sum_probs=47.0

Q ss_pred             CCCceEEEEe---CCHHHHHHHHHHCCcEEeeeccc-cCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           23 PKDNHISFQC---ENMAIVERRLKEMKIDYVKSRVE-EGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        23 p~~~HIAF~V---edId~v~~rLke~GI~~~~~~~~-~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ++..|++|.|   +|+++++++|+++|+++...+.. ....+.+.+||.|||||.|||.+...
T Consensus        63 ~~~~~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  125 (310)
T 3b59_A           63 NRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVA  125 (310)
T ss_dssp             CEEEEEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             CCeeEEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEccc
Confidence            4567999999   68999999999999998776532 01122589999999999999998654

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=98.25  E-value=1.6e-06  Score=72.07  Aligned_cols=57  Identities=19%  Similarity=0.149  Sum_probs=45.5

Q ss_pred             CCCCceEEEEeCC---HHHHHHHHHHCCcEEeeecccc-CCceEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEE-GGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~-~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .++..|++|.|.+   ++++.++|+++|+++....... .+. .+.+||.|||||.|||+..
T Consensus        71 ~~gl~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~-g~~~~f~DPdG~~iEl~~~  131 (365)
T 4ghg_A           71 VAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGI-GDALRVEDPLGFPYEFFFE  131 (365)
T ss_dssp             SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTB-CSEEEEECTTSCEEEEECC
T ss_pred             CCCcceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCC-ceEEEEECCCCCEEEEEEE
Confidence            4478899999974   8899999999999998754321 222 4789999999999999853

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=98.24  E-value=2.6e-06  Score=70.78  Aligned_cols=59  Identities=24%  Similarity=0.410  Sum_probs=42.1

Q ss_pred             CCCCceEEEEeCCHHHH---HHHHHHCCcEE--eeeccccCCc-eEEEEEEEcCCCCEEEEEeecC
Q 032616           22 NPKDNHISFQCENMAIV---ERRLKEMKIDY--VKSRVEEGGI-NVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        22 np~~~HIAF~VedId~v---~~rLke~GI~~--~~~~~~~~g~-g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      .++++|+||+|+|++.+   .++|+++|+..  ...+.. .+. ...++||+||+||+||+.....
T Consensus       209 ~~~lhHvaf~v~d~d~v~~~~d~l~~~g~~~~i~~GpgR-H~~~~~~f~Y~~dP~G~~iE~~t~g~  273 (365)
T 4ghg_A          209 GPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGR-HGVSNAFYLYILDPDNHRIEIYTQDY  273 (365)
T ss_dssp             BSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEE-CSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             CCceeEEEEecCCHHHHHHHHHHHHhCCCCceeEeCCCc-cCCCCcEEEEEECCCCceEEEEcCCc
Confidence            45799999999987765   56899999853  222211 111 1368999999999999987543

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=98.24  E-value=1.3e-06  Score=70.85  Aligned_cols=49  Identities=8%  Similarity=0.051  Sum_probs=41.2

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ..++.|+||.|+|+   +++|+++|+++...+   +    +.+||+|||||.|||++..
T Consensus       105 ~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~---~----~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A          105 GNDFMGITLASSQA---VSNARKLEWPLTEVA---E----GVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             CSSEEEEEEECHHH---HHHHHHHTCCCEEEE---T----TEEEEECTTSCEEEEESSC
T ss_pred             CCCeeEEEEECchH---HHHHHHcCCceeccC---C----ceEEEECCCCCEEEEEecC
Confidence            44789999999987   678899999988644   2    3899999999999999865

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.24  E-value=3.8e-06  Score=60.75  Aligned_cols=52  Identities=12%  Similarity=-0.111  Sum_probs=43.6

Q ss_pred             ceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           26 NHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        26 ~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .+++|.|+|   +++++++|+ .|.++..++.. ..+|.+..+|.||+|+.|+|.+.
T Consensus        82 ~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~-~~wG~r~~~v~Dp~G~~w~l~~~  136 (149)
T 1u6l_A           82 CSISLNVDSKAEAERLFNALA-EGGSVQMPLGP-TFWAASFGMFTDRFGVAWMVNCE  136 (149)
T ss_dssp             EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEE-ETTEEEEEEEECTTSCEEEEEES
T ss_pred             eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccc-cCcccceEEEECCCCCEEEEEEe
Confidence            489999998   889999996 78898877644 34667899999999999999863

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=97.99  E-value=1.5e-05  Score=65.97  Aligned_cols=59  Identities=7%  Similarity=-0.075  Sum_probs=48.6

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccc--cCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE--EGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~--~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .++..|+||+|+|+++++++|+++|+++...+..  .+....+.++|+||+|+++|+++..
T Consensus        97 g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~  157 (381)
T 1t47_A           97 GDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  157 (381)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecC
Confidence            3578899999999999999999999999876642  1222257899999999999999863

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=97.95  E-value=2.7e-05  Score=56.51  Aligned_cols=52  Identities=10%  Similarity=0.004  Sum_probs=43.7

Q ss_pred             ceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           26 NHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        26 ~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ..+++.|+|   +|+++++|+ .|.++..++.. ..||.+..+|+||+|+.++|...
T Consensus        74 ~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~-~~wG~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           74 ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTN-MPPYREFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEE-ETTEEEEEEEECTTSCEEEEEEC
T ss_pred             EEEEEECCCHHHHHHHHHHHh-CCCEEeecccc-cCCCceEEEEECCCCCEEEEeec
Confidence            478899987   888899998 69999887644 34778999999999999999863

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=97.79  E-value=4.8e-05  Score=61.67  Aligned_cols=58  Identities=9%  Similarity=0.020  Sum_probs=47.8

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccc-cCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE-EGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~-~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .++..|+||.|+|+++++++|+++|+++...+.. ..|. .+.++|+||+|..+|+++..
T Consensus        72 g~g~~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~-~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           72 GDGVADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAA-VTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             SSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CC-CCEEEEECSTTCEEEEEECC
T ss_pred             CCeEEEEEEEECCHHHHHHHHHHcCCeEeECcEecCCCe-EEEEEEeccCCeEEEEEecc
Confidence            3578899999999999999999999999876632 1221 47889999999999999864

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=97.64  E-value=9.2e-05  Score=56.40  Aligned_cols=54  Identities=11%  Similarity=0.057  Sum_probs=43.7

Q ss_pred             ceEEEEe--------CCHHHHHHHHHHCC-cEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           26 NHISFQC--------ENMAIVERRLKEMK-IDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        26 ~HIAF~V--------edId~v~~rLke~G-I~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ..+++.|        +|+|+++++|++.| +++..++.. ..||.+..+|+||+|+.|+|...+
T Consensus       104 ~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~-~~wG~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          104 ISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFAD-QFWGGKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             EEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEE-CTTSSEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccc-cCCCcEEEEEECCCCCEEEEEeCC
Confidence            3567777        58999999999999 788887643 346678999999999999998654

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=97.51  E-value=0.00018  Score=61.17  Aligned_cols=59  Identities=3%  Similarity=-0.166  Sum_probs=48.5

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCC
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL   82 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~   82 (137)
                      ++..|+||+|+|+++++++|+++|+++...+....+ ..+..+|++|+|+++++++....
T Consensus       116 ~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~  174 (424)
T 1sqd_A          116 LGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAE  174 (424)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC
T ss_pred             CeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCC
Confidence            578999999999999999999999999887643212 25788888999999999887553

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=97.50  E-value=0.00036  Score=50.69  Aligned_cols=51  Identities=12%  Similarity=0.076  Sum_probs=42.4

Q ss_pred             ceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           26 NHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        26 ~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      -.++|.|+|   +|+++++|+ .|.++..++.. ..+|.+..+|+||+|+.++|..
T Consensus        83 ~~l~l~~~d~~evd~~~~~l~-~Gg~v~~p~~~-~~wg~~~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           83 MSLYVTCETEEEIDTVFHKLA-QDGAILMPLGS-YPFSKKFGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             SCEEEEESSHHHHHHHHHHHH-TTCEEEEEEEE-ETTEEEEEEEECTTSCEEEEEE
T ss_pred             EEEEEEcCCHHHHHHHHHHHH-cCCeEecCccc-ccCCcEEEEEECCCCCEEEEEe
Confidence            479999999   999999996 57788877643 3466799999999999999964

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=97.49  E-value=9.3e-05  Score=61.25  Aligned_cols=58  Identities=14%  Similarity=0.275  Sum_probs=44.7

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeecccc-CCc---------------eEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE-GGI---------------NVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~-~g~---------------g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .++.+||||.|+|+++++++|+++|+++...+..- ...               ....+|-+||+|++++|.+.
T Consensus       265 g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift~  338 (381)
T 1t47_A          265 GAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFTK  338 (381)
T ss_dssp             SCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEBC
T ss_pred             CCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEecc
Confidence            34689999999999999999999999988764211 000               01258889999999999864

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=97.33  E-value=0.00012  Score=59.87  Aligned_cols=59  Identities=10%  Similarity=0.132  Sum_probs=44.5

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEee-ecc--------ccCCce--------EEEEEEEc----CCCCEEEEEeec
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVK-SRV--------EEGGIN--------VDQLFFHD----PDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~-~~~--------~~~g~g--------~r~vFf~D----PDGn~IEI~e~~   80 (137)
                      .++.+|+||.|+|+++++++|+++|+++.. .+.        ..+..+        ...+|..|    |+|++++|.+.+
T Consensus       235 g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift~~  314 (357)
T 1cjx_A          235 GEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFSET  314 (357)
T ss_dssp             SSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEBCC
T ss_pred             CCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEeccC
Confidence            346899999999999999999999999877 331        001111        11488899    999999998654

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.18  E-value=0.00016  Score=67.79  Aligned_cols=54  Identities=20%  Similarity=0.260  Sum_probs=46.4

Q ss_pred             CceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           25 DNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        25 ~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ..|++|.+.|++++.+.|.+.+.++...+.+- +  -..+|..||+||.|||.+..+
T Consensus        95 ~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~-~--~~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           95 QSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEI-S--PFEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             CCEEEEEESCHHHHHHHHHTTTCCCBCSSSSC-S--CEEECCSSCCEEEECC-CCSS
T ss_pred             CceEEEEeCCHHHHHHHHHhcCCccccCCCcC-C--CceEEeECCCCCEEEEeccCC
Confidence            34999999999999999999999999876432 2  379999999999999999888

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=97.12  E-value=0.00034  Score=57.04  Aligned_cols=58  Identities=9%  Similarity=0.028  Sum_probs=46.5

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      .++..|+||+|+|+++++++++++|+++...+.. .|. .+...|++|+|..++++....
T Consensus        74 g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~~~~-~g~-~~~~~~~~~gg~~~~~vd~~~  131 (357)
T 1cjx_A           74 GPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTG-PME-LNLPAIKGIGGAPLYLIDRFG  131 (357)
T ss_dssp             SSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCC-TTC-BCCCEEECGGGCEEEEECCCS
T ss_pred             CCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCCC-CCc-EEEEeeeCCCCeEEEEECCCC
Confidence            3578999999999999999999999998766532 221 356788999999999987653

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=97.01  E-value=0.00093  Score=56.60  Aligned_cols=56  Identities=5%  Similarity=-0.089  Sum_probs=46.7

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeecccc-CCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE-GGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~-~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++..|+||+|+|+++++++++++|+++...+... ++  .+..++++|.|..+++++..
T Consensus       116 ~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~--~~~~~i~~~Gg~~~~lvd~~  172 (418)
T 1sp8_A          116 LAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRG--FRLAEVELYGDVVLRYVSYP  172 (418)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETT--EEEEEEEEETTEEEEEEECC
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCc--eEEEEEecCCCEEEEEEccC
Confidence            5789999999999999999999999998876432 22  56777888999999988765

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=96.65  E-value=0.0043  Score=52.51  Aligned_cols=58  Identities=10%  Similarity=0.105  Sum_probs=48.2

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccc---cCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE---EGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~---~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .++..|+||+|+|+++++++++++|+++...+..   ..|. ++...|++|.|.++-+++..
T Consensus        83 G~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~-v~~a~I~~~Gd~~h~lVdr~  143 (393)
T 3isq_A           83 GDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGK-VKFAVLQTYGDTTHTLVEKM  143 (393)
T ss_dssp             CSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEE-EEEEEEECSTTCEEEEEEEE
T ss_pred             CCcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCce-eEEEEEEeCCCcEEEEeccc
Confidence            4678999999999999999999999999987742   1222 67888999999999888743

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=96.23  E-value=0.02  Score=38.48  Aligned_cols=58  Identities=19%  Similarity=0.206  Sum_probs=43.1

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      .+++|+++.|+|+++..+..+..|.+...........+.+..|+.. +|..||+.+...
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~   63 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPDG   63 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEESS
T ss_pred             eeeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecCC
Confidence            4789999999999999998888899987543211112256677766 678899998654

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=96.18  E-value=0.0027  Score=53.73  Aligned_cols=58  Identities=14%  Similarity=0.366  Sum_probs=42.7

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHH----CCcEEeeecccc---------CCc----------eEEEEEEEcCCCCEEEEEe
Q 032616           22 NPKDNHISFQCENMAIVERRLKE----MKIDYVKSRVEE---------GGI----------NVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke----~GI~~~~~~~~~---------~g~----------g~r~vFf~DPDGn~IEI~e   78 (137)
                      .++++||||.|+||++++++|++    +|+++...+...         +..          ....++-+|.+|+++.|++
T Consensus       279 G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~Pp~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~llqift  358 (418)
T 1sp8_A          279 GPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPPTSDYYDGVRRRAGDVLTEAQIKECQELGVLVDRDDQGVLLQIFT  358 (418)
T ss_dssp             SSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEEEEEEEB
T ss_pred             CCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCCCcchhHHHHHhhccccchhhHHHHHHhCcEEecCCCCeEEEEEe
Confidence            45799999999999999999999    799998764000         000          0125677788888888875


Q ss_pred             e
Q 032616           79 C   79 (137)
Q Consensus        79 ~   79 (137)
                      .
T Consensus       359 ~  359 (418)
T 1sp8_A          359 K  359 (418)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=95.99  E-value=0.0042  Score=52.64  Aligned_cols=58  Identities=17%  Similarity=0.335  Sum_probs=43.7

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHH----CCcEEeeecccc---------CCc----------eEEEEEEEcCCCCEEEEEe
Q 032616           22 NPKDNHISFQCENMAIVERRLKE----MKIDYVKSRVEE---------GGI----------NVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke----~GI~~~~~~~~~---------~g~----------g~r~vFf~DPDGn~IEI~e   78 (137)
                      .++.+||||.|+||++.+++|++    +|+++...+...         +..          ....++-+|.+|+++.|++
T Consensus       282 G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~pp~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~llqift  361 (424)
T 1sqd_A          282 GAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQIFT  361 (424)
T ss_dssp             SCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEEEEEEEB
T ss_pred             CCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCCCcchhHHHHHhhccccchhhHHHHHHcCeEEecCCCCeEEEEEc
Confidence            45789999999999999999999    899999754100         000          0125788899999998885


Q ss_pred             e
Q 032616           79 C   79 (137)
Q Consensus        79 ~   79 (137)
                      .
T Consensus       362 ~  362 (424)
T 1sqd_A          362 K  362 (424)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=95.69  E-value=0.033  Score=44.95  Aligned_cols=54  Identities=17%  Similarity=0.165  Sum_probs=37.0

Q ss_pred             CCCceE---EEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHI---SFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HI---AF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .|..|+   ++.+.+-+++..-|+. +..+....-.+.|   ..+|+.|||||.|||+...
T Consensus        69 ~Glkh~a~i~i~vp~~~el~~lL~~-~~~~~~~~~gdhg---yA~yl~dPEGn~ieiyae~  125 (244)
T 3e0r_A           69 EGRKKLARLIVKVENPLEIEGILSK-TDSIHRLYKGQNG---YAFEIFSPEDDLILIHAED  125 (244)
T ss_dssp             CSSCSEEEEEEEESSHHHHHHHHTT-CSCCSEEEECSSS---EEEEEECTTCCEEEEECCS
T ss_pred             cccceeeeEEEEcCCHHHHHHHHhc-ccccccccccCCc---EEEEEECCCCCeEEEEEcC
Confidence            366677   5999986666665544 5555432222344   4799999999999998644

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=95.49  E-value=0.062  Score=37.52  Aligned_cols=61  Identities=10%  Similarity=0.027  Sum_probs=42.8

Q ss_pred             CCCCCCceEEEEeCCHHHHHHHHHH-CCcEEeeecccc-------------CCceEEEEEEEcCCCCEEEEEeecC
Q 032616           20 NINPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEE-------------GGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        20 ~inp~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~-------------~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ....+++|+++.|.|+++..+..++ .|.+........             .+.+.+.+|+.. .|..||+.+...
T Consensus        15 ~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-g~~~leL~~~~~   89 (159)
T 3gm5_A           15 LDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-GPLQLELIEPDE   89 (159)
T ss_dssp             CCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-TTEEEEEEEECS
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec-CCEEEEEEEECC
Confidence            3344799999999999999999887 898866432110             012256677765 477899998754

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=95.45  E-value=0.0074  Score=51.09  Aligned_cols=58  Identities=19%  Similarity=0.340  Sum_probs=43.0

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeecc----------ccCC------c----eEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRV----------EEGG------I----NVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~----------~~~g------~----g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .++.+||||.|+||++.+++|+++|+++...|.          ...+      +    ....++=+|.+|+++.|++.
T Consensus       254 G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P~~YY~~l~~r~~~~~~~~~e~~~~l~~~~IL~D~d~~g~llQifT~  331 (393)
T 3isq_A          254 GAGVQHIALKTEDIITAIRHLRERGLEFLSVPSTYYKQLREKLKTAKIKVKENIDALEELKILVDYDEKGYLLQIFTK  331 (393)
T ss_dssp             SSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCHHHHHHHHHHHTTCSSCCCSCHHHHHHHTCEEEECSSCEEEEEEBC
T ss_pred             CCCcceEEEEcCCHHHHHHHHHHcCCccCCCCccHHHHHHHHhccccccccccHHHHHhcCcEEccCCCceEEEEEee
Confidence            567999999999999999999999999987541          0000      0    02356777888888887764

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=95.34  E-value=0.087  Score=34.63  Aligned_cols=62  Identities=15%  Similarity=0.146  Sum_probs=46.0

Q ss_pred             CCCceEEEEeCCHHHHHHHHHH-CCcEEeeecc-ccCCceEEEEEEEcCCCCEEEEEeecCCCCcc
Q 032616           23 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICNCDVLPVVP   86 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke-~GI~~~~~~~-~~~g~g~r~vFf~DPDGn~IEI~e~~~~p~~p   86 (137)
                      .+++|+++.|.|+++..+..++ .|.+...... +..+  ...+|+..++|..+++.+....+..|
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~l~l~~~~~~~~~~   65 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKG--FNSYFLSFEDGARLEIMSRTDVTGKT   65 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGT--EEEEEEECSSSCEEEEEEETTCCCCC
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCC--ccEEEEEcCCCcEEEEEecCCCCCCC
Confidence            3678999999999999988855 5988876531 2223  46778887789999999887544433

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=94.96  E-value=0.17  Score=33.13  Aligned_cols=53  Identities=9%  Similarity=0.063  Sum_probs=40.1

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      +++|+++.|.|+++..+..++ .|.++........+ +...+++...++ .+|+..
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~-~l~l~~   58 (134)
T 3l7t_A            5 AVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKR-HDYKLDLKCGDI-ELEIFG   58 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTT-TEEEEEEEETTE-EEEEEE
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCC-cceEEEEecCCe-EEEEEe
Confidence            678999999999999999976 79998865432222 245677776554 899998

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=94.88  E-value=0.47  Score=31.99  Aligned_cols=56  Identities=16%  Similarity=0.290  Sum_probs=44.1

Q ss_pred             CCCceEEEEeCCHHHHHHHHHH-CCcEEeeecc-c-------cCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           23 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRV-E-------EGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke-~GI~~~~~~~-~-------~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      .+++|+++.|.|+++..+..++ .|.++..... +       ..+   ..+||.-++|..+++.....
T Consensus        18 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~l~~~~~   82 (156)
T 3kol_A           18 RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASG---KVANFITPDGTILDLFGEPE   82 (156)
T ss_dssp             CCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTT---SEEEEECTTSCEEEEEECTT
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCC---cEEEEEeCCCCEEEEEecCC
Confidence            3789999999999999999988 7999886321 0       122   35788888999999998765

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=94.73  E-value=0.11  Score=34.09  Aligned_cols=55  Identities=15%  Similarity=0.184  Sum_probs=41.5

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeecc-ccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~-~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +++|+++.|.|+++..+..++ .|.++..... +..+  .+.+|+.. +|..+|+.+...
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~-~~~~~~l~~~~~   61 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHG--VSVVFVNL-GNTKMELLHPLG   61 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGT--EEEEEEEC-SSSEEEEEEECS
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCC--EEEEEEec-CCEEEEEEecCC
Confidence            578999999999999999988 8999876432 2223  45666665 678899987654

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=94.64  E-value=0.12  Score=35.03  Aligned_cols=56  Identities=21%  Similarity=0.310  Sum_probs=42.3

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeecccc----------CCceEEEEEEEcCCC-CEEEEEee
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEE----------GGINVDQLFFHDPDG-SMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~----------~g~g~r~vFf~DPDG-n~IEI~e~   79 (137)
                      +++|+++.|.|+++..+..++.|.++.......          ...+.+.+|+.-++| ..||+.+.
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            688999999999999988888899887542110          012357788888777 79999875

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=94.48  E-value=0.16  Score=34.21  Aligned_cols=57  Identities=11%  Similarity=0.196  Sum_probs=43.9

Q ss_pred             CCCceEEEEeCCHHHHHHHHHH-CCcEEeeecc-ccCCceEEEEEEEcCCC-----CEEEEEeecC
Q 032616           23 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPDG-----SMIEICNCDV   81 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke-~GI~~~~~~~-~~~g~g~r~vFf~DPDG-----n~IEI~e~~~   81 (137)
                      .+++|+++.|.|+++..+..++ .|.+...... +..+  .+.+|+..++|     ..||+.+...
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~l~l~~~~~   71 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQG--VVEIMMAPAAKLTEHMTQVQVMAPLN   71 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTT--EEEEEEESSSSCCTTCCEEEEEEESS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCC--eEEEEEEcCCCCcCcceEEEEeecCC
Confidence            4689999999999999998875 7999876532 2223  46788888876     8899998754

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=94.24  E-value=0.26  Score=31.94  Aligned_cols=79  Identities=11%  Similarity=0.146  Sum_probs=50.6

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCCCCcccCCCcccccccccccc
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVN  102 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~p~~pl~~~~~~~~~~~~~~~  102 (137)
                      +++|+++.|.|+++..+..++ .|.+.....   ++   ...|+..++|..+++.+....|.   .+.......+.++-+
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~---~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~~v~~~~d   73 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GN---AFAVMRDNDGFILTLMKGKEVQY---PKTFHVGFPQESEEQ   73 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TT---TEEEEECTTCCEEEEEECSSCCC---CTTCCEEEECSSHHH
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccC---CC---cEEEEEcCCCcEEEEEeCCCCCC---CceeEEEEEcCCHHH
Confidence            678999999999999998877 799887542   22   24677777888899987654431   111112223323355


Q ss_pred             hhhhhhHhh
Q 032616          103 CNFHQQQIQ  111 (137)
Q Consensus       103 ~~~~~~~~~  111 (137)
                      +....+.+.
T Consensus        74 ~~~~~~~l~   82 (113)
T 1xqa_A           74 VDKINQRLK   82 (113)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            555555543

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=94.06  E-value=0.48  Score=31.25  Aligned_cols=55  Identities=9%  Similarity=0.039  Sum_probs=41.1

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeecc-ccCCceEEEEEEEcCC---CCEEEEEeec
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPD---GSMIEICNCD   80 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~-~~~g~g~r~vFf~DPD---Gn~IEI~e~~   80 (137)
                      +++|+++.|.|+++..+..++ .|.++..... +.++  .+.+|+.-++   |..+|+....
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~   61 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYK--YSLAFVGYGPETEEAVIELTYNW   61 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTT--EEEEEEESSCTTTSCEEEEEEET
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCc--eEEEEEecCCCCCCcEEEEEEcC
Confidence            568999999999999999987 7999876542 2222  3556776554   7899998754

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=94.04  E-value=0.15  Score=35.88  Aligned_cols=55  Identities=20%  Similarity=0.155  Sum_probs=42.5

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeecc-ccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~-~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +++|+++.|.|+++..+..++ .|.+...... +..+  .+.+|+.. .|..||+.+...
T Consensus         8 ~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~--~~~~~~~~-g~~~l~l~~~~~   64 (161)
T 3oa4_A            8 KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQG--VKIAFLEI-GESKIELLEPLS   64 (161)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGT--EEEEEEEE-TTEEEEEEEESS
T ss_pred             cCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCC--eEEEEEeC-CCeEEEEEeECC
Confidence            689999999999999999988 8999876432 2233  46777776 467899998754

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=93.95  E-value=0.28  Score=31.81  Aligned_cols=55  Identities=15%  Similarity=0.139  Sum_probs=40.8

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeecc-ccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~-~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +++|+++.|.|+++..+..++ .|.++..... +..+  ...+++.-+++ .+++.+...
T Consensus         5 ~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~-~l~l~~~~~   61 (126)
T 2p25_A            5 EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKN--DIKLDLKLGSQ-ELEIFISDQ   61 (126)
T ss_dssp             CCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGT--EEEEEEEETTE-EEEEEECTT
T ss_pred             ccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCc--ceEEEEecCCe-EEEEEeccC
Confidence            678999999999999999977 8999876431 2222  34566666677 899997643

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=92.12  E-value=0.4  Score=32.25  Aligned_cols=55  Identities=15%  Similarity=0.131  Sum_probs=39.7

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ++.|+++.|.|+++..+..++ .|.++...... ...+...+|+.  +|..|+|.+...
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-~~~~~~~~~~~--~~~~l~l~~~~~   60 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRG-DTTSFAHGVLP--GGLSIVLREHDG   60 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC-SSEEEEEEECT--TSCEEEEEEETT
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccC-CCCceEEEEEc--CCCEEEEEeCCC
Confidence            578999999999999988876 69998765421 11113445554  789999998754

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=91.72  E-value=1.2  Score=30.16  Aligned_cols=56  Identities=9%  Similarity=0.089  Sum_probs=42.2

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeecc-ccCCceEEEEEEEcCC---CCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPD---GSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~-~~~g~g~r~vFf~DPD---Gn~IEI~e~~~   81 (137)
                      +++|++|.|.|+++..+..++ .|.++..... +.++  .+.+|+.-++   +..|++.+...
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~l~l~~~~~   68 (144)
T 2c21_A            8 RMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDK--YTLVFLGYGPEMSSTVLELTYNYG   68 (144)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGT--EEEEEEESSCTTTSCEEEEEEETT
T ss_pred             eeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCC--eEEEEEEcCCCCCceEEEEEecCC
Confidence            678999999999999999876 7999876432 2223  3556777665   58999998754

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=91.43  E-value=0.96  Score=32.11  Aligned_cols=56  Identities=5%  Similarity=-0.034  Sum_probs=42.4

Q ss_pred             CCCCceEEEEeCCHHHHHHHHH-HCCcEEeeeccc-cCCceEEEEEEEcCCC------------------CEEEEEee
Q 032616           22 NPKDNHISFQCENMAIVERRLK-EMKIDYVKSRVE-EGGINVDQLFFHDPDG------------------SMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLk-e~GI~~~~~~~~-~~g~g~r~vFf~DPDG------------------n~IEI~e~   79 (137)
                      .-+++|+++.|.|+++..+..+ -.|.++...... .++  ...+|+..+++                  ..+|+...
T Consensus        32 ~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~  107 (187)
T 3vw9_A           32 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMK--FSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHN  107 (187)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTT--EEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEE
T ss_pred             eeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCc--eeEEEecCCCcccccccccchhhhcccCCceEEEEEe
Confidence            4478999999999999999885 479998875432 223  56777777764                  78999654

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=91.04  E-value=1.6  Score=29.84  Aligned_cols=53  Identities=8%  Similarity=0.029  Sum_probs=39.2

Q ss_pred             CCCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEE-cCCCCEEEEEeec
Q 032616           23 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFH-DPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~-DPDGn~IEI~e~~   80 (137)
                      .+++|+++.|.|+++..+..++ .|.++.... ...+    ..|+. +..|..|++.+..
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~-~~~~----~~~~~~~~~~~~l~l~~~~   81 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLD-SARR----WNFLWVSGRAGMVVLQEEK   81 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCEEEEEE-TTTT----EEEEEETTTTEEEEEEECC
T ss_pred             ceecEEEEEeCCHHHHHHHHHHhcCCEEEEec-CCCc----EEEEEecCCCcEEEEeccC
Confidence            3689999999999999999976 799988764 2222    23333 4467899998764

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=91.01  E-value=1  Score=32.03  Aligned_cols=58  Identities=5%  Similarity=-0.001  Sum_probs=41.8

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCC------------------CCEEEEEeec
Q 032616           22 NPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPD------------------GSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPD------------------Gn~IEI~e~~   80 (137)
                      ..+++|+++.|.|+++..+..++ .|.++.......+ .+...+|+..++                  |..||+.+..
T Consensus        29 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~  105 (184)
T 2za0_A           29 DFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPA-MKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNW  105 (184)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGG-GTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEET
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCC-CCceeEEecccccccCCcccchheeeecCCCceEEEEecC
Confidence            34789999999999999999887 7999876532111 113556666653                  6799998764

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=90.56  E-value=1.2  Score=28.98  Aligned_cols=57  Identities=4%  Similarity=-0.058  Sum_probs=41.0

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCC-CEEEEEeec
Q 032616           22 NPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDG-SMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDG-n~IEI~e~~   80 (137)
                      ..+++|+++.|.|+++..+..++ .|.++........+  ...+.+..++| ..+++....
T Consensus        11 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~l~l~~~~   69 (133)
T 4hc5_A           11 IAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN--MRFVTVVPPGAQTQVALGLPS   69 (133)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT--EEEEEEECTTCSCEEEEECGG
T ss_pred             ccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC--ceEEEEECCCCceEEEEecCc
Confidence            34789999999999999998865 79998875432233  35666665554 568887654

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=88.75  E-value=3.1  Score=27.72  Aligned_cols=52  Identities=12%  Similarity=0.015  Sum_probs=38.8

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ..+.+|+++.|.|+++..+..++ .|.+.....   .    ..++|...+|..+++....
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~---~----~~~~~~~~~~~~l~l~~~~   63 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVT---P----RYVAFPSSGDALFAIWSGG   63 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEEC---S----SEEEEECSTTCEEEEESSS
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcC---C----CEEEEEcCCCcEEEEEeCC
Confidence            45889999999999999888776 688765432   1    2345666678899998765

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=87.77  E-value=1.1  Score=36.06  Aligned_cols=30  Identities=13%  Similarity=0.318  Sum_probs=27.4

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEee
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVK   51 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~   51 (137)
                      .+++.|++|+++|+++..++|+++|+.+..
T Consensus       104 geGl~~~alrt~Di~a~~a~l~~~Gl~~~~  133 (274)
T 3p8a_A          104 EQGFKNICLHTNDIEAVKNKLQSEQVEVVG  133 (274)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHTTTCEEEE
T ss_pred             CCCeEEEEEecCCHHHHHHHHHHcCCCcCC
Confidence            468999999999999999999999998764

>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}

Probab=87.40  E-value=1.5  Score=36.88  Aligned_cols=52  Identities=10%  Similarity=0.102  Sum_probs=38.0

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeecc--ccCCc-------eEEEEEEEcCCCCE
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRV--EEGGI-------NVDQLFFHDPDGSM   73 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~--~~~g~-------g~r~vFf~DPDGn~   73 (137)
                      .+..||+..+|.||+++.+.|+++|++.-....  +++..       -...+-|.|.||-.
T Consensus       233 G~~iNHlT~rv~DId~v~~~m~~~G~~~k~~IeGsP~~lLrQTSf~A~~e~v~F~d~~G~~  293 (340)
T 3iuz_A          233 GNAFNHATDRVDDVFGLSEQQXALGRPMXDXVEVSGSGRVXQTAFRADTVRRQFIGAQGET  293 (340)
T ss_dssp             TTSCSEEEEECSCHHHHHHHHHHTTCCBCSCCEECTTSSEEEEEBCCCEEEEEEECTTSCE
T ss_pred             CCccccccCCcCCHHHHHHHHHHcCCChhhhhcCCcccceeeeeccccceEEEEecCCCce
Confidence            347899999999999999999999999776431  11110       13457788888753

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=87.32  E-value=1.9  Score=28.95  Aligned_cols=58  Identities=16%  Similarity=0.197  Sum_probs=38.2

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCce-EEEEEEEcCCCCEEEEEeecCCC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGIN-VDQLFFHDPDGSMIEICNCDVLP   83 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g-~r~vFf~DPDGn~IEI~e~~~~p   83 (137)
                      +++|+++.|.|+++..+..++ .|.+....... ..+. ....|+.- +|..|++.+....|
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~-g~~~l~l~~~~~~~   63 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDT-EQFSLSREKFFLI-GDIWVAIMQGEKLA   63 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG-STTCCSCEEEEEE-TTEEEEEEECCCCS
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC-ccccccceEEEEE-CCEEEEEEeCCCCC
Confidence            578999999999999988876 79988764321 1110 01224433 57789998765443

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=85.29  E-value=2.4  Score=28.40  Aligned_cols=51  Identities=8%  Similarity=0.014  Sum_probs=38.0

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ++.|+.+.|.|+++..+..++.|.++.... +..    ..+.+.-++|..+++...
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~-~~~----~~~~~~~~~~~~l~l~~~   54 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEA-DSA----PHTEAVLDGGIRLAWDTV   54 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGG-GGC----SEEEEECTTSCEEEEEEH
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecC-CCC----ceEEEEcCCCeEEEEecC
Confidence            578999999999999998888898876543 222    234444467889999864

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=84.72  E-value=6.8  Score=26.10  Aligned_cols=57  Identities=12%  Similarity=0.149  Sum_probs=40.4

Q ss_pred             CCceEEEEeCCHHHHHHHHH-HCCcEEeeeccccCCceEEEEEEEcCCC-CEEEEEeecCC
Q 032616           24 KDNHISFQCENMAIVERRLK-EMKIDYVKSRVEEGGINVDQLFFHDPDG-SMIEICNCDVL   82 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLk-e~GI~~~~~~~~~~g~g~r~vFf~DPDG-n~IEI~e~~~~   82 (137)
                      ...|+++.|.|+++..+..+ -.|.++.......++  ...+|+..+++ ..+|+......
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~~~--~~~~~~~~~~~~~~l~l~~~~~~   69 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNG--YDGVMFGLPHADYHLEFTQYEGG   69 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEETT--EEEEEEESSSSSEEEEEEEETTC
T ss_pred             ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccCCCC--eeEEEEecCCCceEEEEeecCCC
Confidence            45689999999999999885 469988754322233  36788887765 46888776543

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=84.54  E-value=3.2  Score=28.65  Aligned_cols=45  Identities=11%  Similarity=0.031  Sum_probs=32.9

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDG   71 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDG   71 (137)
                      +++|+++.|+|+++..+.-++ .|.++.... +.++  .+.+++..|+|
T Consensus        26 ri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~-~~~~--~~~~~~~~~~~   71 (155)
T 4g6x_A           26 RIHLTNVFVDDQAKAESFYTGKLGFLVKADV-PVGA--DRWLTVVSPEA   71 (155)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCEEEEEE-EETT--EEEEEEECTTC
T ss_pred             EEEEEEEEeCCHHHHHHHHHHHhCCEEEEee-cCCC--ceEEEEeccCC
Confidence            789999999999999988866 799987654 2233  35556655544

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=83.02  E-value=3.3  Score=28.76  Aligned_cols=52  Identities=17%  Similarity=0.173  Sum_probs=39.1

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL   82 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~   82 (137)
                      +++|+.+.|.|+++..+..++ .|.++....   +    ..++|.-++|..+++.....+
T Consensus         6 ~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~----~~~~~~~~~g~~l~l~~~~~~   58 (148)
T 3rhe_A            6 DPNLVLFYVKNPAKSEEFYKNLLDTQPIESS---P----TFAMFVMKTGLRLGLWAQEEI   58 (148)
T ss_dssp             -CEEEEEEESCHHHHHHHHHHHHTCCCSEEC---S----SEEEEECTTSCEEEEEEGGGC
T ss_pred             cccEEEEEeCCHHHHHHHHHHHcCCEEeccC---C----CEEEEEcCCCcEEEEecCCcC
Confidence            688999999999999888776 788876542   1    245666678999999876544

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=82.53  E-value=4.9  Score=27.19  Aligned_cols=50  Identities=10%  Similarity=0.165  Sum_probs=37.8

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +++|+++.|.|+++..+..++ .|.++....   .+    .+++.- +|..+++.....
T Consensus        23 ~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~~----~~~l~~-~~~~l~l~~~~~   73 (152)
T 3huh_A           23 RIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---QN----RKALIF-GAQKINLHQQEM   73 (152)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEET---TT----EEEEEE-TTEEEEEEETTB
T ss_pred             eeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---CC----eEEEEe-CCeEEEEeccCC
Confidence            689999999999999999988 899988753   22    233332 567889887643

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=82.47  E-value=3.9  Score=28.05  Aligned_cols=51  Identities=14%  Similarity=0.144  Sum_probs=38.4

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ++.|+.|.|.|+++..+..++ .|.++....   ++    .++|.-.+|..++|.....
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~---~~----~~~~~~~~~~~l~l~~~~~   76 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYKALLGVDPVESS---PT----FSLFVLANGMKLGLWSRHT   76 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHTCCCSEEE---TT----EEEEECTTSCEEEEEETTS
T ss_pred             ceeEEEEEeCCHHHHHHHHHHccCCEeccCC---CC----eEEEEcCCCcEEEEEeCCC
Confidence            789999999999999988876 688876543   22    3455555688999986544

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=82.43  E-value=4.1  Score=27.80  Aligned_cols=49  Identities=12%  Similarity=0.132  Sum_probs=37.6

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++.|+.|.|.|+++..+..++ .|.++....   ++    .++|.. +|..|++.+..
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~---~~----~~~~~~-~~~~l~l~~~~   54 (150)
T 3bqx_A            5 QVAVITLGIGDLEASARFYGEGFGWAPVFRN---PE----IIFYQM-NGFVLATWLVQ   54 (150)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTSCCCCSEEC---SS----EEEEEC-SSSEEEEEEHH
T ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEeecCC---CC----EEEEEc-CCEEEEEEecc
Confidence            678999999999999998887 798876542   22    445554 68899998764

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=81.98  E-value=3.4  Score=27.14  Aligned_cols=57  Identities=19%  Similarity=0.243  Sum_probs=35.8

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCce-EEEEEEEcCCCCEEEEEeecCC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGIN-VDQLFFHDPDGSMIEICNCDVL   82 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g-~r~vFf~DPDGn~IEI~e~~~~   82 (137)
                      +++|+++.|.|+++..+..++ .|.+..... +...+. ....|+.- +|..+++.+....
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~-~~~~~~~~~~~~~~~-~~~~l~l~~~~~~   62 (133)
T 2p7o_A            4 GLSHITLIVKDLNKTTAFLQNIFNAEEIYSS-GDKTFSLSKEKFFLI-AGLWICIMEGDSL   62 (133)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEECC------CCCSSCEEEEEE-TTEEEEEEECSSC
T ss_pred             eEEEEEEEcCCHHHHHHHHHHhcCCEEeeec-CCcccccCCceEEEe-CCEEEEEecCCCC
Confidence            578999999999999988877 799877543 111100 01124433 5778888875443

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=81.87  E-value=10  Score=25.91  Aligned_cols=52  Identities=10%  Similarity=0.139  Sum_probs=38.3

Q ss_pred             CCCCceEEEEeCCHHHHHHHH----HHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           22 NPKDNHISFQCENMAIVERRL----KEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rL----ke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ..++.|+++.|.|+++..+..    +-.|.+..... + .+    ..|+.  +|..|+|.+...
T Consensus        18 ~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~-~-~~----~~~~~--g~~~l~l~~~~~   73 (146)
T 3ct8_A           18 QGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSW-S-RG----KSYKH--GKTYLVFVQTED   73 (146)
T ss_dssp             TTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEE-T-TE----EEEEE--TTEEEEEEECCG
T ss_pred             ccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEec-C-CC----ceEec--CCeEEEEEEcCC
Confidence            347899999999999998877    56899987643 1 22    23555  677899987653

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=80.86  E-value=4.6  Score=28.07  Aligned_cols=50  Identities=12%  Similarity=0.232  Sum_probs=37.1

Q ss_pred             CCCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .++.|+++.|.|+++..+..++ .|.++.....   +   ..+|+.. +|..+++...
T Consensus         7 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~---~~~~~~~-g~~~~~l~~~   57 (160)
T 3r4q_A            7 SAIMETALYADDLDAAEAFYRDVFGLEMVLKLP---G---QLVFFKC-GRQMLLLFDP   57 (160)
T ss_dssp             SCEEEEEEECSCHHHHHHHHHHHSCCEEEEEET---T---TEEEEEE-TTEEEEEECH
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEEecC---C---cEEEEeC-CCEEEEEEec
Confidence            3789999999999999998887 8999886541   2   2445554 4567888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	137
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-06
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	3e-06
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	3e-05
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	1e-04
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-04
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	3e-04
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	3e-04
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	7e-04
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	7e-04
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	9e-04
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	0.003

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 2e-06
 Identities = 17/88 (19%), Positives = 29/88 (32%), Gaps = 5/88 (5%)

Query: 1   MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVER---RLKEMKIDYVKSRVEEG 57
                      D+  ++  N N            +  V     R +E+ + +VK   +  
Sbjct: 90  TLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGK 149

Query: 58  GINVDQLFFHDPDGSMIEICNCDVLPVV 85
                  F  DPDG  IEI N + +  +
Sbjct: 150 M--KGLAFIQDPDGYWIEILNPNKMATL 175

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 41.8 bits (97), Expect = 3e-06
 Identities = 14/64 (21%), Positives = 21/64 (32%), Gaps = 5/64 (7%)

Query: 20  NINPKDNHISFQCENMA---IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 76
            +   D+ + F   N      +  +LK M    V+S           +   DPDG  I  
Sbjct: 71  PVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNG--GVTIEDPDGWRIVF 128

Query: 77  CNCD 80
            N  
Sbjct: 129 MNSK 132

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 39.2 bits (90), Expect = 3e-05
 Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 3   IHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVD 62
           +  L  E       A  N     +H++++ +++  V   L+E  +  +    + G     
Sbjct: 65  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 124

Query: 63  QLFFH--DPDGSMIEIC 77
             F H     G +IE+ 
Sbjct: 125 INFMHPKSGKGVLIELT 141

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 37.4 bits (85), Expect = 1e-04
 Identities = 8/51 (15%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 27  HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC 77
            + F  E++  +  RL +   + V   V+    +    +    +G +I + 
Sbjct: 96  RVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLA 145

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 36.6 bits (83), Expect = 2e-04
 Identities = 14/77 (18%), Positives = 24/77 (31%)

Query: 1   MGIHLLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGIN 60
                   E   N       +     HI+   +N A    ++++   +  +      G  
Sbjct: 48  PETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGT 107

Query: 61  VDQLFFHDPDGSMIEIC 77
               F  DPDG  IE+ 
Sbjct: 108 TVIAFVEDPDGYKIELI 124

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 36.1 bits (82), Expect = 3e-04
 Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 1/50 (2%)

Query: 27  HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 76
                  +      R+ ++ +D    R    G     ++F+D D  M E+
Sbjct: 71  AFKIDDADFDRYAERVGKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFEL 119

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 36.5 bits (83), Expect = 3e-04
 Identities = 10/76 (13%), Positives = 18/76 (23%)

Query: 11  PDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPD 70
              L             I     +   +    +  +   VK        N   L F D +
Sbjct: 64  EIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAE 123

Query: 71  GSMIEICNCDVLPVVP 86
           G  + +   +   V  
Sbjct: 124 GLRLVLLVSNGEKVEH 139

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 35.6 bits (81), Expect = 7e-04
 Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 5/73 (6%)

Query: 19  KNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE-----GGINVDQLFFHDPDGSM 73
               P+ +H++F       + +   +M    +  R+E      G  N   L+  DPDG  
Sbjct: 59  GGNGPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHR 118

Query: 74  IEICNCDVLPVVP 86
           IEI   D     P
Sbjct: 119 IEIYTQDYYTGDP 131

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 35.0 bits (79), Expect = 7e-04
 Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 23  PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 76
                +S + +N   V  R+ +  +      V E    V +LF  DP G +I I
Sbjct: 58  TDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINI 110

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 34.9 bits (79), Expect = 9e-04
 Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 4/51 (7%)

Query: 26  NHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 76
                   + A    +L+   +   K    EG    D  +F DPDG  +E 
Sbjct: 65  YAFGIAAADFARFAAQLRAHGVREWKQNRSEG----DSFYFLDPDGHRLEA 111

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 33.4 bits (75), Expect = 0.003
 Identities = 8/50 (16%), Positives = 15/50 (30%)

Query: 27  HISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 76
                 + +  +ER L        +    E      ++ F  P G   E+
Sbjct: 70  FKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFEL 119

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	137
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.42
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.32
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.27
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.27
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.25
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.23
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.18
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.17
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.16
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.13
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.13
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.09
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.08
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	98.97
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	98.95
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	98.94
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	98.92
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	98.88
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	98.8
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	98.79
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	98.79
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	98.73
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	98.67
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	98.56
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	98.55
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.54
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	98.48
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.47
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	98.46
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.46
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	98.04
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	97.49
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	96.68
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	96.66
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	95.96
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	95.71
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	95.31
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	95.13
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	94.64
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	94.57
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	94.18
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	93.99
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	93.6
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	93.33
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	92.81
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	91.74
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	91.14
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	90.87
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	88.28
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	87.01
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	85.97
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	84.75
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	81.7
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	81.59
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	80.76
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	80.61
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	80.32

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.42  E-value=2.2e-13  Score=94.75  Aligned_cols=57  Identities=14%  Similarity=0.193  Sum_probs=48.3

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ..+.+|++|.|+|+++++++|++.|+++...+....+ +.+.+||+|||||+|||++.
T Consensus        91 ~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          91 ALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             SBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEE
T ss_pred             CcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEc
Confidence            3467899999999999999999999999877643222 36899999999999999874

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=6.9e-13  Score=95.87  Aligned_cols=60  Identities=25%  Similarity=0.386  Sum_probs=52.6

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCCCCc
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVV   85 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~p~~   85 (137)
                      +..|+||.++|+++++++|+++|+++...+...  .+.+.+||+|||||+|||++..++|.|
T Consensus       116 g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g--~~~~~~f~~DPdG~~IElvq~~~~~~~  175 (176)
T d1qipa_         116 GFGHIGIAVPDVYSACKRFEELGVKFVKKPDDG--KMKGLAFIQDPDGYWIEILNPNKMATL  175 (176)
T ss_dssp             BEEEEEEECSCHHHHHHHHHHTTCEEEECTTSS--SSTTCEEEECTTCCEEEEECTTTGGGC
T ss_pred             ceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccC--CceEEEEEECCCCCEEEEEeCCCCCcc
Confidence            678999999999999999999999999877543  234678999999999999999988765

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.27  E-value=7.3e-12  Score=85.68  Aligned_cols=55  Identities=16%  Similarity=0.308  Sum_probs=47.5

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ...|++|.|+|+++++++|+++|+++..++... ++|.+.+||+|||||+||+.+.
T Consensus        60 ~~~~~~f~v~D~d~~~~~l~~~G~~i~~~~~~~-~~g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          60 SGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVT-DWGTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             SCEEEEEECSCHHHHHHHHHHHTCCEEEEEEEC-TTSCEEEEEECGGGCEEEEEEC
T ss_pred             cceEEEEEECCHHHHHHHHHhhccccccceEEe-eCCeEEEEEECCCCCEEEEEEe
Confidence            345899999999999999999999999876543 3456999999999999999874

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.27  E-value=1.3e-11  Score=86.16  Aligned_cols=59  Identities=12%  Similarity=0.144  Sum_probs=47.8

Q ss_pred             CCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCCCCc
Q 032616           24 KDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVV   85 (137)
Q Consensus        24 ~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~p~~   85 (137)
                      +.+|+||+|++   ++++.++|+++|+.+.... ..++  .+++||+|||||+|||++.+..|.-
T Consensus        77 ~~~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~-~~~~--~~~~yf~DPdG~~iEl~~~~~~~~~  138 (144)
T d1zswa1          77 AITRIGLLVPSEDSLHYWKERFEKFDVKHSEMT-TYAN--RPALQFEDAEGLRLVLLVSNGEKVE  138 (144)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHHTTCEECCSE-EETT--EEEEEEECTTCCEEEEEECTTCCCT
T ss_pred             ceeEEEEecCCchhHHHHhhhhhccceeeeCcc-ccCC--eEEEEEECCCCCEEEEEEeCCCCCC
Confidence            57999999998   7788999999999885433 2233  5899999999999999988765543

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.25  E-value=5.2e-12  Score=88.32  Aligned_cols=60  Identities=25%  Similarity=0.314  Sum_probs=48.8

Q ss_pred             CCCCCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCC
Q 032616           21 INPKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVL   82 (137)
Q Consensus        21 inp~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~   82 (137)
                      ...+.+|++|.|++   +++++++|++.|+++...+.+.  ++.+.+||+|||||+||+++++++
T Consensus        72 ~~~~~~hlaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~--~~~~~~~f~DPDG~~Iel~~~~~~  134 (137)
T d1twua_          72 VPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPY--WSNGGVTIEDPDGWRIVFMNSKGI  134 (137)
T ss_dssp             CCCTTCEEEEECCCHHHHHHHHHHHHHTTCCEECCSSHH--HHSSEEEEECTTCCEEEEESSCCC
T ss_pred             ccccCceEEEEeCCHHHHHHHHHHHHHCCCeEeCCCCCC--CCceEEEEECCCCCEEEEEcCCCC
Confidence            34467899999876   7888899999999998755332  234789999999999999988764

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.23  E-value=9.5e-12  Score=82.34  Aligned_cols=54  Identities=26%  Similarity=0.402  Sum_probs=46.2

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEE
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC   77 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~   77 (137)
                      +...|++|.++|+|+++++|+++|+++...+... .+|.+.+||+|||||+|||+
T Consensus        58 ~~~~~~~~~~~dvd~~~~~l~~~g~~~~~~p~~~-~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          58 TDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTE-AWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             BCCCSEEEEESCHHHHHHHHHHTTCCCSEEEEEC-TTSCEEEEEECTTSCEEEEE
T ss_pred             CceeEEEEEecCHHHHHHHHHhhccccccCCeEc-CCCcEEEEEECCCCCEEEeC
Confidence            4567999999999999999999999998776443 23468999999999999985

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.18  E-value=7e-11  Score=81.00  Aligned_cols=57  Identities=12%  Similarity=0.130  Sum_probs=46.9

Q ss_pred             CCCCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ..+..|++|.|++   +++++++|+++|+++...+... .+|.+.+||+|||||+|||++.
T Consensus        67 ~~~~~~l~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~-~~G~~~~~~~DPdG~~iel~~p  126 (128)
T d1klla_          67 GGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNA-VWGQRYAIVKDPDGNVVDLFAP  126 (128)
T ss_dssp             SSCSCEEEEECSSHHHHHHHHHHHHHTTCEEEEEEEEC-TTSEEEEEEECTTSCEEEEEEE
T ss_pred             cccceeEeeeeccchhhHHHHHHHHhccCccccCCeEc-CCCcEEEEEECCCCCEEEEEec
Confidence            3356799999986   7778999999999998876443 3457999999999999999853

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.17  E-value=6.8e-12  Score=86.23  Aligned_cols=59  Identities=15%  Similarity=0.282  Sum_probs=45.4

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEE--EcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFF--HDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf--~DPDGn~IEI~e~~   80 (137)
                      ..+++|+||.|+|+++++++|+++|+++.......+..|.+.+|+  +||||++|||+++.
T Consensus        84 ~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          84 RAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            447899999999999999999999999875432211112344555  69999999999974

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.16  E-value=6.9e-11  Score=79.29  Aligned_cols=59  Identities=20%  Similarity=0.236  Sum_probs=48.7

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ....|++|.+++++.+.+++++.|+.+...+......+.+++||+|||||+|||++.+.
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~  128 (135)
T d1f9za_          70 TAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             SSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             ccceeeccchHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCC
Confidence            46789999999999999999999999888764333334689999999999999998764

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.13  E-value=2.9e-11  Score=82.80  Aligned_cols=57  Identities=21%  Similarity=0.353  Sum_probs=44.5

Q ss_pred             CCCCceEEEEeC--CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~Ve--dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .++.+|++|.++  |+++++++|++.|+++...+.... .+.+.+||+|||||+|||.+.
T Consensus        64 ~~~~~~~~f~v~~~dv~~~~~~l~~~gv~i~~~~~~~~-~~~~~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          64 ERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVE-GEGRSIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             SCCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             ccceeeeeecccHHHHHHHHHHHHHCCCeEecCCcccC-CCEEEEEEECCCCCEEEEEEC
Confidence            446789999886  799999999999999976543222 124789999999999999764

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.13  E-value=1.7e-10  Score=80.18  Aligned_cols=56  Identities=20%  Similarity=0.360  Sum_probs=45.8

Q ss_pred             CCCCCCceEEEEeC--CHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           20 NINPKDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        20 ~inp~~~HIAF~Ve--dId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ....+.+|++|.++  |+++++++|+++|+++...+. ..   .+++||+|||||.|||.+.
T Consensus        60 ~~~~~~~h~~~~~~~~d~~~~~~~l~~~Gv~~~~~~~-~~---~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          60 PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNK-SE---GASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             GGGSCSCEEEEECCHHHHHHHHHHHHHTTCCEEECCC-SS---SEEEEEECTTCCEEEEEEC
T ss_pred             CcCCccceeeeechHHHHHHHHHHHHHCCCeEeecCC-CC---ceEEEEECCCCCEEEEEEC
Confidence            34557889999984  899999999999999986542 22   3799999999999999764

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.09  E-value=1.3e-10  Score=85.08  Aligned_cols=54  Identities=19%  Similarity=0.342  Sum_probs=44.0

Q ss_pred             CCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           24 KDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        24 ~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      +.+||||.|+|   ++++.++|++.|+++.. ....++  .+++||+|||||+|||++..
T Consensus        75 ~l~HiAf~V~~~~~l~~~~~~l~~~G~~~~~-~~~~~~--~~s~Yf~DPdG~~iEl~t~~  131 (170)
T d1zswa2          75 SIHHLAIRVKNDAELAYWEEQVKQRGFHSSG-IIDRFY--FKSLYFRESNGILFEIATDG  131 (170)
T ss_dssp             CEEEEEEEESSHHHHHHHHHHHHHTTCCCCC-CEECSS--EEEEEEECTTCCEEEEEEEE
T ss_pred             ccceEEEEeCChHHHHHHHHHHHhcCCCccc-cccCCC--EEEEEEECCCCcEEEEEECC
Confidence            67899999986   77889999999999853 323332  58999999999999999753

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.08  E-value=2e-10  Score=76.31  Aligned_cols=52  Identities=25%  Similarity=0.384  Sum_probs=41.9

Q ss_pred             CCCCceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEE
Q 032616           22 NPKDNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC   77 (137)
Q Consensus        22 np~~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~   77 (137)
                      .++..|++|.|+|   ++++.++|++.|+++...+.  ++  .+++||+|||||+|||.
T Consensus        58 ~~~~~h~~f~v~~~~~v~~~~~~l~~~G~~~~~~~~--~~--~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          58 YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKH--AH--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             CCTTCCEEEECSSHHHHHHHHHHHHHTTCCCCCCEE--C---CEEEEEEETTTEEEEEE
T ss_pred             ccccceeeeeeccccchhhhhhhHHHcCCccccCCC--Cc--eEEEEEECCCCCEEEEE
Confidence            3467899999987   67788999999999765442  22  37899999999999994

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=98.97  E-value=1.1e-09  Score=73.97  Aligned_cols=57  Identities=19%  Similarity=0.236  Sum_probs=45.9

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeecc------ccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRV------EEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~------~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ...|+++.+++++++++++++.|+.+.....      ....+|.+.+||+|||||+|||.+.+
T Consensus        57 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          57 SWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             CCcEEEEEECCHHHHHHHHhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEcc
Confidence            3468999999999999999999998765321      12334569999999999999999854

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.95  E-value=1.9e-09  Score=74.15  Aligned_cols=52  Identities=23%  Similarity=0.341  Sum_probs=41.9

Q ss_pred             CCceEEEEe--CCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           24 KDNHISFQC--ENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF~V--edId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      +.+|++|.+  +|+++++++|+++|+++...+.  ++  .+.+||+|||||.|||...
T Consensus        61 ~~~h~~~~~~~~dl~~~~~~l~~~G~~~~~~~~--~~--~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          61 DYTHYAFGIAAADFARFAAQLRAHGVREWKQNR--SE--GDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             SSCEEEEEECHHHHHHHHHHHHHTTCCEEECCC--SS--SCEEEEECTTCCEEEEESC
T ss_pred             ccccchhccccchHHHHHHHHHHCCCcCccCCC--cc--eeEEEEECCCCCEEEEEEC
Confidence            456777776  5899999999999999876532  22  3789999999999999753

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=98.94  E-value=6.5e-10  Score=80.00  Aligned_cols=58  Identities=17%  Similarity=0.247  Sum_probs=45.5

Q ss_pred             CCCceEEEEeCCHH---HHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeec
Q 032616           23 PKDNHISFQCENMA---IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        23 p~~~HIAF~VedId---~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      ++.+|++|.+.+++   +++++|++.|+++...+...+..+.+++||+|||||.|||....
T Consensus        65 ~~~~h~~~~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~  125 (162)
T d1mpya2          65 GRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGG  125 (162)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECC
T ss_pred             CccceeEEEEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECC
Confidence            46889999998766   67799999999988765432211258999999999999998653

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=98.92  E-value=9e-10  Score=77.67  Aligned_cols=56  Identities=18%  Similarity=0.176  Sum_probs=45.5

Q ss_pred             CCCCceEEEEeC---CHHHHHHHHHHCCcEEeeecccc-CCceEEEEEEEcCCCCEEEEEe
Q 032616           22 NPKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEE-GGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        22 np~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~-~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      .++.+|++|.+.   |++++.++|+++|+++...+... .|. .+++||+|||||+|||+.
T Consensus        70 ~~~~~h~~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~~DPdG~~iEl~~  129 (146)
T d1f1ua1          70 IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGI-GDSVRVEDPLGFPYEFFY  129 (146)
T ss_dssp             SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTB-CSEEEEECTTSCEEEEEC
T ss_pred             CCCCceeeEeeccchhHHHHHHHHHHcCCceeeccccccCCc-eEEEEEECCCCcEEEEEE
Confidence            457889999997   58899999999999998655332 222 379999999999999985

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=98.88  E-value=1.1e-09  Score=76.25  Aligned_cols=56  Identities=20%  Similarity=0.269  Sum_probs=44.3

Q ss_pred             CCCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccc---cCCceEEEEEEEcCCCCEEEEEe
Q 032616           22 NPKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVE---EGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        22 np~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~---~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      .++..|++|.|.   +++++.++|+++|+++...+..   ..+ +.+.+||+|||||+||++.
T Consensus        56 ~~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~~f~DPdGn~iE~~~  117 (131)
T d1lgta1          56 VDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRG-VTGLITFADPFGLPLEIYY  117 (131)
T ss_dssp             TCEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHT-CSEEEEEECTTSCEEEEEE
T ss_pred             CCCceEEEEEEccHHHHHHHHHHHHHcCCceEECCccccccCC-ceEEEEEECCCCCEEEEEe
Confidence            346889999996   5778899999999999875522   112 1478999999999999974

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=98.80  E-value=4.5e-09  Score=70.46  Aligned_cols=56  Identities=5%  Similarity=0.045  Sum_probs=43.7

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeeccc------cCCceEEEEEEEcCCCCEEEEEee
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRVE------EGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~~------~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ...|+.|.+++++.+.+++++.++........      ....+.+++||+|||||+|||.+.
T Consensus        60 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          60 DNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             TTCEEEEEESCHHHHHHHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             ceeEEEEeechhHHHHHHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            45689999999999999999999876544311      011235899999999999999875

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=98.79  E-value=1.2e-09  Score=76.28  Aligned_cols=63  Identities=14%  Similarity=0.274  Sum_probs=47.7

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeeecccc---CCceEEEEEEEcCCCCEEEEEeec----CCCCcc
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVEE---GGINVDQLFFHDPDGSMIEICNCD----VLPVVP   86 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~~---~g~g~r~vFf~DPDGn~IEI~e~~----~~p~~p   86 (137)
                      ++.+|++|.|.   +++++.++|+++|+++...+...   .+. .+.+||.|||||+|||+...    ..|.+|
T Consensus        57 ~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~-~~~~~~~DPdGn~iE~~~~~~~~~~~p~~P  129 (132)
T d1kw3b1          57 DDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKV-MGLLCLQDPFGLPLEIYYGPAEIFHEPFLP  129 (132)
T ss_dssp             CEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTC-SEEEEEECTTSCEEEEEECCCBCTTSCCCC
T ss_pred             CCceEEEEEeccHHHHHHHHHHHHHcCCCceecCccccccCCc-ceEEEEECCCCCEEEEEECCCccCCCCCCC
Confidence            46889999996   57889999999999998755321   111 47899999999999998432    255555

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=98.79  E-value=2.7e-09  Score=74.10  Aligned_cols=56  Identities=16%  Similarity=0.225  Sum_probs=43.4

Q ss_pred             CCCceEEEEeC---CHHHHHHHHHHCCcEEeeeccc-cCCceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCE---NMAIVERRLKEMKIDYVKSRVE-EGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~Ve---dId~v~~rLke~GI~~~~~~~~-~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ++..|++|.+.   |+++++++|+++|+++...+.. ..|. .+++||+|||||.|||...
T Consensus        63 ~~~~~~~~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~-~~~~~f~DPdG~~iEl~~~  122 (145)
T d1mpya1          63 PGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSC-GRRVRFQAPSGHHFELYAD  122 (145)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTB-CCEEEEECTTSCEEEEESC
T ss_pred             ccceeeeeeehhHHHHHHHHHHHHHCCCcEEECCCcccCCc-eEEEEEECCCCCEEEEEEe
Confidence            34567777764   7899999999999998875532 2232 3899999999999999853

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=98.73  E-value=1.3e-08  Score=67.67  Aligned_cols=53  Identities=21%  Similarity=0.256  Sum_probs=45.3

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ...|+++.++++++++++++..++++...+   ++  .+++||+|||||+|||++...
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g--~~~~~~~DPdGn~iEl~~~~~  124 (139)
T d2c21a1          72 AYGHIAIGVEDVKELVADMRKHDVPIDYED---ES--GFMAFVVDPDGYYIELLNEKT  124 (139)
T ss_dssp             SEEEEEEEESCHHHHHHHHHHTTCCEEEEC---SS--SSEEEEECTTSCEEEEEEHHH
T ss_pred             ccceeeeehhhHHHHHHHHHHcCCceeeCC---CC--cEEEEEECCCCCEEEEEECCC
Confidence            556899999999999999999999988654   23  479999999999999998653

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=98.67  E-value=3e-08  Score=72.54  Aligned_cols=61  Identities=25%  Similarity=0.362  Sum_probs=43.3

Q ss_pred             CCCCCceEEEEeCCHH---HHHHHHHHCCcEEee--eccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           21 INPKDNHISFQCENMA---IVERRLKEMKIDYVK--SRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        21 inp~~~HIAF~VedId---~v~~rLke~GI~~~~--~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ..++.+|++|.+.+++   ...++|+++|+....  .+...+.-+..++||+|||||+|||.....
T Consensus        61 ~~~~~~H~~f~~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          61 NGPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             SBSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             cCCCccceeEEeccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence            3457899999998655   556799999986432  222211111478999999999999987654

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=98.56  E-value=3.9e-08  Score=70.65  Aligned_cols=56  Identities=11%  Similarity=0.047  Sum_probs=41.2

Q ss_pred             CCCCceEEEEeCCHH---HHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCC-EEEEEe
Q 032616           22 NPKDNHISFQCENMA---IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGS-MIEICN   78 (137)
Q Consensus        22 np~~~HIAF~VedId---~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn-~IEI~e   78 (137)
                      .++++|+||+|++++   ++.++|+++|+.+........+ ...++||+||||| .+|+..
T Consensus        72 ~~gl~Hiaf~v~~~ddv~~~~d~l~~~G~~~~g~~rH~~~-~~~s~Y~~DP~G~~~~E~~~  131 (156)
T d1kw3b2          72 PKRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTND-QTLSFYADTPSPMIEVEFGW  131 (156)
T ss_dssp             SSSEEEEEEEBSSHHHHHHHHHHHHHTTCBCBCSEEESSS-CCEEEEEECSSTTCEEEEEE
T ss_pred             CCceeEEEEECCCHHHHHHHHHHHHhcCCceecCcccCCC-CeEEEEEECCCCCeEEEEec
Confidence            347899999998655   5679999999876543322112 1479999999998 589864

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=98.55  E-value=1e-07  Score=67.94  Aligned_cols=59  Identities=7%  Similarity=-0.075  Sum_probs=48.8

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccc--cCCceEEEEEEEcCCCCEEEEEeec
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE--EGGINVDQLFFHDPDGSMIEICNCD   80 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~--~~g~g~r~vFf~DPDGn~IEI~e~~   80 (137)
                      .++..||||+|+|+++++++|+++|+++...+..  +.+-.++.+|+++|+|..+++++..
T Consensus        82 g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~  142 (163)
T d1t47a1          82 GDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  142 (163)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEecc
Confidence            4578999999999999999999999999987642  2222378999999999988888753

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.54  E-value=7.9e-08  Score=68.62  Aligned_cols=59  Identities=3%  Similarity=-0.148  Sum_probs=50.8

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      .++..||||.|+|+++++++|+++|+++..+|....+ +.+.++++.+.+..+|+++...
T Consensus       102 ~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~-~~~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1         102 GLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             CSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECC
T ss_pred             CCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCC-CEEEEEEEccCCcEEEEEecCC
Confidence            3578999999999999999999999999988754322 2789999999999999999864

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.48  E-value=1.2e-07  Score=65.26  Aligned_cols=53  Identities=9%  Similarity=-0.098  Sum_probs=45.4

Q ss_pred             CceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           25 DNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        25 ~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      .-+++|.++|+++++.++.+.|.++..++... .+|.+..+|+||+|+.++|.+
T Consensus        83 ~~~l~~~v~d~~~~~~~~~~~g~~~~~~~~~~-~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          83 GVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAE-VELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             CCEEEEECSCHHHHHHHHHHTTCEECCCCHHH-HHTTEEEEEECTTSCEEEEEC
T ss_pred             ceEEEEeecCcceeEEEeecccceEecCcccc-cccCEEEEEECCCCCEEEEeC
Confidence            45999999999999999999999999876432 244689999999999999964

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.47  E-value=1e-07  Score=69.04  Aligned_cols=59  Identities=5%  Similarity=-0.104  Sum_probs=50.2

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      .++..||||+|+|+++++++|+++|+++...+...+ .+++.+|++-|.|.++|+++..+
T Consensus        97 g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~-~g~~~a~v~~~g~~~~~lve~~~  155 (172)
T d1sp8a1          97 GLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLG-RGFRLAEVELYGDVVLRYVSYPD  155 (172)
T ss_dssp             SSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEE-TTEEEEEEEEETTEEEEEEECCT
T ss_pred             CCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCC-CCEEEEEEECCCCcEEEEEecCC
Confidence            357899999999999999999999999998875422 23799999999888999998764

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=98.46  E-value=1.5e-07  Score=62.01  Aligned_cols=54  Identities=9%  Similarity=0.145  Sum_probs=40.3

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeec-------cccCCceEEEEEEEcCCCCEEEEEe
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSR-------VEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~-------~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      +..++.+.+++++.+.+.+.+++++.....       ..+.++ .+++||+|||||+||+..
T Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          59 DNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPW-GREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             GGCEEEEEEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETT-EEEEEEECTTCCEEEEEE
T ss_pred             CCceEEEeeccHHHHHHHHHHhhhHHhhhcccccccCceecCC-EEEEEEECCCCCEEEEEE
Confidence            456889999999999998887776654421       111223 379999999999999974

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=1.6e-07  Score=65.61  Aligned_cols=60  Identities=10%  Similarity=0.045  Sum_probs=49.4

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccc--cCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE--EGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~--~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      .++..|+||.|+|+++++++|+++|+++...+..  +..-.++.++++.|+|..+|+++..+
T Consensus        83 g~G~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~  144 (149)
T d1sqia1          83 GDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKIN  144 (149)
T ss_dssp             CSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEES
T ss_pred             CCeEEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCC
Confidence            4578999999999999999999999999887642  22113678999999999999998764

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=98.04  E-value=1.7e-06  Score=62.31  Aligned_cols=60  Identities=8%  Similarity=0.037  Sum_probs=50.4

Q ss_pred             CCCCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           20 NINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        20 ~inp~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      ...++.+|+||+|+|+++++++++++|++....+...+.  .....+++|+|.+|.+++..+
T Consensus        69 ~hg~gv~hiaf~V~D~~~a~~~a~~~Ga~~i~~~~~~g~--~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          69 EHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPME--LNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             HHSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCCCTTC--BCCCEEECGGGCEEEEECCCS
T ss_pred             hCCCceEEEEEEeCCHHHHHHHHHHCCCEEcccCCCCCc--eeeeEEEcCCCCEEEEECcCC
Confidence            356789999999999999999999999998877654333  467889999999999998643

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.49  E-value=0.00033  Score=47.85  Aligned_cols=56  Identities=13%  Similarity=-0.162  Sum_probs=42.5

Q ss_pred             CCCceEEEEeCCHH--HHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           23 PKDNHISFQCENMA--IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~VedId--~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      +...++++.+++-|  +.+.+..+.|.++..++.. ..+|.+..+|+||+|+.++|...
T Consensus        78 ~~~~~~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~-~~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          78 IKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGP-TFWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             CCSEEEEEECSSHHHHHHHHHHHHTTSEEEEEEEE-ETTEEEEEEEECTTSCEEEEEES
T ss_pred             CCcEEEEEEcCCHHHHHHHHhhcccCceeecCccc-cCCCcEEEEEECCCCCEEEEEec
Confidence            35678999998655  3355555689999987744 34667899999999999999754

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=96.68  E-value=0.00053  Score=51.31  Aligned_cols=32  Identities=13%  Similarity=0.317  Sum_probs=29.1

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeec
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSR   53 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~   53 (137)
                      +++.+||||.|+||.+.+++|+++|+++...+
T Consensus        82 g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          82 GEGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             SSBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            46899999999999999999999999998654

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=96.66  E-value=0.0013  Score=49.23  Aligned_cols=32  Identities=9%  Similarity=0.317  Sum_probs=29.5

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeec
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSR   53 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~   53 (137)
                      .++.+||||.|+||.+..+.|+++|+++...|
T Consensus        87 g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          87 GAGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             SCEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            46899999999999999999999999998765

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0014  Score=49.53  Aligned_cols=58  Identities=17%  Similarity=0.324  Sum_probs=42.7

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcEEeeeccc----------cCC--c--------eEEEEEEEcCCCCEEEEEee
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKIDYVKSRVE----------EGG--I--------NVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~~~~~~~~----------~~g--~--------g~r~vFf~DPDGn~IEI~e~   79 (137)
                      .++.+||||.|+||.++.++|+++|+++...+..          ...  .        ....+|-.|.+|.++.|.+.
T Consensus       105 G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~~YY~~l~~r~~~~~~~~~~~~~~l~~~~IL~D~d~~g~llqifT~  182 (210)
T d1sqia2         105 GAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLRENLKTSKIQVKENMDVLEELKILVDYDEKGYLLQIFTK  182 (210)
T ss_dssp             SSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCHHHHHHHHHHHHTCSSCCCSCHHHHHHHTCEEECCTTCEEEEEEBC
T ss_pred             CCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCcchhhhHHhhhhcccccccccHHHHHhcCEEEecCCCCeEEEEeec
Confidence            5579999999999999999999999999865520          000  0        01356777888877777653

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=95.71  E-value=0.019  Score=37.85  Aligned_cols=57  Identities=21%  Similarity=0.292  Sum_probs=42.5

Q ss_pred             CCCceEEEEeCCHHHHHHHHHHCCcEEeeecccc----------CCceEEEEEEEcCCC-CEEEEEee
Q 032616           23 PKDNHISFQCENMAIVERRLKEMKIDYVKSRVEE----------GGINVDQLFFHDPDG-SMIEICNC   79 (137)
Q Consensus        23 p~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~----------~g~g~r~vFf~DPDG-n~IEI~e~   79 (137)
                      .+++|+++.|+|+++..+..++.|.++.......          .+...+.+|+..++| ..+++.+.
T Consensus         8 ~ri~Hv~i~v~Dle~s~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~   75 (149)
T d1ss4a_           8 LRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   75 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             CEEeEEEEEeCCHHHHHHHHHHcCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEee
Confidence            3789999999999999999888898877653211          122367888888876 57887764

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=95.31  E-value=0.0034  Score=47.50  Aligned_cols=27  Identities=11%  Similarity=0.252  Sum_probs=24.0

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHHCCcE
Q 032616           22 NPKDNHISFQCENMAIVERRLKEMKID   48 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke~GI~   48 (137)
                      .++.+||||.|+||++.++.|+++|+.
T Consensus        89 g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          89 GPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             SSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             CCCceeEEEEeCCHHHHHHHHHhcccc
Confidence            468899999999999999999998654

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=95.13  E-value=0.054  Score=34.03  Aligned_cols=52  Identities=13%  Similarity=0.282  Sum_probs=41.2

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +++|+.+.|+|+++..+..++ .|.+.....   ++   ..+|+.++++..+.+.....
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~   55 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GN---AFAVMRDNDGFILTLMKGKE   55 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TT---TEEEEECTTCCEEEEEECSS
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEee---cC---cceeeeecceeeeeeeeeec
Confidence            678999999999999988777 699887543   22   35778888999999886544

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.64  E-value=0.22  Score=33.46  Aligned_cols=51  Identities=12%  Similarity=0.126  Sum_probs=37.2

Q ss_pred             CceEEEEeCC---HHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEE
Q 032616           25 DNHISFQCEN---MAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEIC   77 (137)
Q Consensus        25 ~~HIAF~Ved---Id~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~   77 (137)
                      ...+++.+++   .+++++.|.+ |.++..+.. +..+|.+...++||.|+.+.|.
T Consensus        78 ~~s~~l~~~~~d~~~~~~~~l~~-gg~v~~p~~-~~~~g~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          78 AFSFFVDCESNAQIERLAEALSD-GGKALMPLG-DYGFSQRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             TEEEEEECCCHHHHHHHHHHHHT-TSEEEEEEE-CCSSSSEEEEEECTTSCEEEEE
T ss_pred             ceEEEEEeccHHHHHHHHHHHhc-CCEEecCcc-cccccceEEEEECCCCCEEEEE
Confidence            3578888876   4456677755 667776653 3445678999999999999985

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=94.57  E-value=0.033  Score=36.88  Aligned_cols=57  Identities=21%  Similarity=0.311  Sum_probs=41.1

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCC---CEEEEEeec
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDG---SMIEICNCD   80 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDG---n~IEI~e~~   80 (137)
                      +++|+++.|.|+++..+..++ .|.++........+.+.+.+++.+..+   ..++.....
T Consensus         6 gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   66 (144)
T d1zswa1           6 GHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIP   66 (144)
T ss_dssp             SEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECT
T ss_pred             ceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccc
Confidence            789999999999999998888 799988765332223356777777654   455555443

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.18  E-value=0.0095  Score=45.22  Aligned_cols=27  Identities=11%  Similarity=0.172  Sum_probs=23.8

Q ss_pred             CCCCCceEEEEeCCHHHHHHHHHHCCc
Q 032616           21 INPKDNHISFQCENMAIVERRLKEMKI   47 (137)
Q Consensus        21 inp~~~HIAF~VedId~v~~rLke~GI   47 (137)
                      ..++.+||||.|+||.+.+++|+++|+
T Consensus       101 ~G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2         101 EGAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             TSCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             cCCceeEEEEEeCCHHHHHHHHHHhhc
Confidence            356899999999999999999999744

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=93.99  E-value=0.067  Score=36.57  Aligned_cols=57  Identities=9%  Similarity=0.103  Sum_probs=39.8

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeecc-ccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~-~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +++|++|.|.|+++..+..++ .|.+...... +..+.....+++.. .+..+++.+...
T Consensus         7 ~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~-~~~~i~l~~~~~   65 (163)
T d1t47a1           7 GMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTN-GSARFVLTSVIK   65 (163)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEE-TTEEEEEEEESS
T ss_pred             eEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEec-CCEEEEEeccCC
Confidence            789999999999999999986 7998876432 22333344555554 455688877543

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.60  E-value=0.075  Score=35.59  Aligned_cols=57  Identities=11%  Similarity=0.091  Sum_probs=37.4

Q ss_pred             CCceEEEEeCCHHHHHHHHH-HCCcEEeeeccc-cCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLK-EMKIDYVKSRVE-EGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLk-e~GI~~~~~~~~-~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +++|++|.|.|+++..+... ..|.+....... .+......+.+.+ ++..+++.+...
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   69 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQ-GKIVFVLCSALN   69 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEE-TTEEEEEEEESS
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecC-CcEEEEEEeccC
Confidence            68899999999999998775 579997765432 2222233444444 445567766544

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=93.33  E-value=0.21  Score=32.14  Aligned_cols=59  Identities=7%  Similarity=0.096  Sum_probs=40.8

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEE-----cCCCCEEEEEeecC
Q 032616           22 NPKDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFH-----DPDGSMIEICNCDV   81 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~-----DPDGn~IEI~e~~~   81 (137)
                      -.+++|+++.|+|+++..+..++ .|.+....... ...+....+..     ...+..+|+.+...
T Consensus         5 ~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~el~~~~~   69 (145)
T d1jc4a_           5 FICIDHVAYACPDADEASKYYQETFGWHELHREEN-PEQGVVEIMMAPAAKLTEHMTQVQVMAPLN   69 (145)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEE-TTTTEEEEEEESSSSCCTTCCEEEEEEESS
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeee-cccceEEEeeeceeccccccchhhhhhhhc
Confidence            34789999999999999998877 58887654422 12223444444     35667899988654

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.81  E-value=0.14  Score=34.83  Aligned_cols=54  Identities=17%  Similarity=0.314  Sum_probs=35.1

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeecc-ccCCceEEEEEEEcCCCCEEEEEe
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~-~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      +++|++|.|.|+++..+..++ +|.+...... +.+.. ....+.....+..+.+..
T Consensus        12 ~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~   67 (167)
T d1sqda1          12 RFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNM-VHASYLLTSGDLRFLFTA   67 (167)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCS-SEEEEEEEETTEEEEEEE
T ss_pred             eEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCe-eEEEEEeeCCCeeEEEec
Confidence            689999999999999998876 8998776543 22222 234443333344444443

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=91.74  E-value=0.36  Score=32.34  Aligned_cols=52  Identities=8%  Similarity=0.006  Sum_probs=37.8

Q ss_pred             ceEEEEeCCHH---HHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEee
Q 032616           26 NHISFQCENMA---IVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNC   79 (137)
Q Consensus        26 ~HIAF~VedId---~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~   79 (137)
                      ..+.+.+++-|   +++++|.+.| ++..+.. +..+|.+...+.||.|+.+.|..+
T Consensus        74 ~s~~v~~~~~~e~~~~~~~L~~gg-~v~~p~~-~~~~g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          74 ISLFVTVKDTIEMERLFNGLKDEG-AILMPKT-NMPPYREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CCEEEECSSHHHHHHHHHHHHTTC-EEEEEEE-EETTEEEEEEEECTTSCEEEEEEC
T ss_pred             EEEEeccCCHHHHHHHHHHhccCC-EEecccc-cccccceEEEEECCCCCEEEEeCC
Confidence            35778887654   5667886655 7776543 334667899999999999999753

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=91.14  E-value=0.22  Score=34.45  Aligned_cols=57  Identities=9%  Similarity=0.075  Sum_probs=37.5

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeecc-ccCCceEEEEEEEcCCCCEEEEEeecC
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPDGSMIEICNCDV   81 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~-~~~g~g~r~vFf~DPDGn~IEI~e~~~   81 (137)
                      +++|++|.|.|++++.+...+ +|.+...... ..+.. ....+.....+..+++.....
T Consensus        13 ~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   71 (172)
T d1sp8a1          13 AFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNS-AHASLLLRSGSLSFLFTAPYA   71 (172)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCC-SEEEEEEEETTEEEEEEEECC
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccce-eEEEEEeccCCeeeEEeeccC
Confidence            789999999999999998875 7998876542 22222 233444444455566655544

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.87  E-value=0.37  Score=33.47  Aligned_cols=55  Identities=7%  Similarity=0.120  Sum_probs=37.6

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEE-cCCCCEEEEEee
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFH-DPDGSMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~-DPDGn~IEI~e~   79 (137)
                      +++|++|.|.|+++..+.-+.+|.++........+. ...+|.+ +...+.+.+...
T Consensus         5 rl~Hv~l~v~Dle~s~~FYe~LGf~~~d~~~~~~~~-~~~~~~~~~~~~~~l~~~~~   60 (176)
T d1f1ua2           5 RLDHFNQVTPDVPRGRAYLEDLGFRVSEDIKDSDGV-TYAAWMHRKQTVHDTALTGG   60 (176)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCEEEEEEECTTCC-EEEEEEESSSSSCSEEEEES
T ss_pred             EeeeEEEEcCCHHHHHHHHHHCCCEEEEEEecCCcc-eeeeeeccCccccceecccc
Confidence            678999999999999988888999988654332232 3344444 455555555543

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.28  E-value=0.56  Score=31.59  Aligned_cols=47  Identities=4%  Similarity=-0.054  Sum_probs=33.5

Q ss_pred             CCCCceEEEEeCCHHHHHHHHHH-CCcEEeeecc-ccCCceEEEEEEEcCC
Q 032616           22 NPKDNHISFQCENMAIVERRLKE-MKIDYVKSRV-EEGGINVDQLFFHDPD   70 (137)
Q Consensus        22 np~~~HIAF~VedId~v~~rLke-~GI~~~~~~~-~~~g~g~r~vFf~DPD   70 (137)
                      +-+++|+++.|.|+++.++.-++ .|.++..... +.++  ...+|+...+
T Consensus        21 ~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~--~~~~~~~~~~   69 (176)
T d1qipa_          21 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMK--FSLYFLAYED   69 (176)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTT--EEEEEEESCC
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCc--eEEEEeecCC
Confidence            33689999999999999998876 7999876543 2223  3455555444

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=87.01  E-value=2  Score=27.01  Aligned_cols=83  Identities=12%  Similarity=0.076  Sum_probs=47.7

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEEEeecCCCCcccCCCcccccccccccc
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICNCDVLPVVPLAGDAVRIRSCTSTVN  102 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e~~~~p~~pl~~~~~~~~~~~~~~~  102 (137)
                      +++|++|.|.|+++..+...+ .|.++...............|+. ..+..+++......+.-...   -+..++ +.-+
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~f~v-~~~d   78 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFL-IGDIWVAIMQGEKLAERSYN---HIAFKI-DDAD   78 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEE-ETTEEEEEEECCCCSSCCSC---EEEEEC-CGGG
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEe-cCCEEEeeccccccccccee---eeeecc-cHHH
Confidence            578999999999998876665 58887765432221112344444 35667777654432221221   233444 4456


Q ss_pred             hhhhhhHhh
Q 032616          103 CNFHQQQIQ  111 (137)
Q Consensus       103 ~~~~~~~~~  111 (137)
                      +.....+++
T Consensus        79 v~~~~~~l~   87 (130)
T d1r9ca_          79 FDRYAERVG   87 (130)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            666555554

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=85.97  E-value=1.4  Score=29.50  Aligned_cols=52  Identities=8%  Similarity=0.073  Sum_probs=34.9

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEEcCCCCEEEE
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI   76 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI   76 (137)
                      +++|+++.|.|+++..+..++ +|.++.+......+ .....|+...++.....
T Consensus         5 rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   57 (162)
T d1mpya2           5 RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENG-TRVAQFLSLSTKAHDVA   57 (162)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTC-CEEEEEEESSSBSCSEE
T ss_pred             cccEEEEECCCHHHHHHHHHHccCCEEEEEEccccc-cceeeeeeccccccccc
Confidence            689999999999999987776 79988865433222 23455555444443333

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=84.75  E-value=1.1  Score=28.32  Aligned_cols=50  Identities=10%  Similarity=-0.008  Sum_probs=37.6

Q ss_pred             CCceEEEEeCCHHHHHHHHHHCCcEEeeeccccCCceEEEEEEEcCCCCEEEEEe
Q 032616           24 KDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEICN   78 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke~GI~~~~~~~~~~g~g~r~vFf~DPDGn~IEI~e   78 (137)
                      +++|+++.|+|+++..+.-++.|..+..... ..    ..+++.-++|..+.+..
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~Lg~~~~~~~~-~~----~~~~~~~~~~~~~~~~~   51 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRKMGVEIPAEAD-SA----PHTEAVLDGGIRLAWDT   51 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCCCTTGG-GC----SEEEEECGGGCEEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhCCccccccc-cc----cceeeeccceeeeeecc
Confidence            6789999999999999988888887765442 22    24566667777887765

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=81.70  E-value=1.4  Score=27.11  Aligned_cols=30  Identities=7%  Similarity=0.122  Sum_probs=25.8

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeec
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSR   53 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~   53 (137)
                      ++.|+++.|.|+++..+...+ .|.++....
T Consensus         3 r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~   33 (139)
T d2c21a1           3 RMLHTMIRVGDLDRSIKFYTERLGMKVLRKW   33 (139)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred             ceEEEEEEeCCHHHHHHHHHHHhCCEeeccc
Confidence            578999999999999988877 799987654

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=81.59  E-value=4  Score=24.86  Aligned_cols=31  Identities=3%  Similarity=0.083  Sum_probs=26.1

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeecc
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRV   54 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~   54 (137)
                      ++.|++|.|.|+++..+.-++ .|.+......
T Consensus         2 kl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~   33 (135)
T d1f9za_           2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSE   33 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEE
T ss_pred             cceEEEEEcCCHHHHHHHHHHHhCCEEEeecc
Confidence            578999999999999997776 6999887653

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=80.76  E-value=3  Score=26.62  Aligned_cols=30  Identities=10%  Similarity=0.140  Sum_probs=25.9

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeec
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSR   53 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~   53 (137)
                      +++|++|.|+|++++.+..++ .|.++....
T Consensus         4 ~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~   34 (140)
T d1npba_           4 SLNHLTLAVSDLQKSVTFWHELLGLTLHARW   34 (140)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCEEEEEe
Confidence            678999999999999998887 799887543

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=80.61  E-value=2.3  Score=31.12  Aligned_cols=56  Identities=7%  Similarity=0.084  Sum_probs=39.1

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeec----cccCCceEEEEEEEcCCCCE-EEEEee
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSR----VEEGGINVDQLFFHDPDGSM-IEICNC   79 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~----~~~~g~g~r~vFf~DPDGn~-IEI~e~   79 (137)
                      +++||++.|.|++++....++ .|.+.....    +.....+++...+..|+|.. +++.+.
T Consensus         9 ~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~   70 (224)
T d1sp8a2           9 RFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEP   70 (224)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEE
T ss_pred             eeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeee
Confidence            578999999999999998887 698765432    11122236888899999854 566554

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=80.32  E-value=2.8  Score=26.95  Aligned_cols=49  Identities=12%  Similarity=0.123  Sum_probs=35.7

Q ss_pred             CCceEEEEeCCHHHHHHHHHH-CCcEEeeeccccCCceEEEEEEE-cCCCCEEEEEee
Q 032616           24 KDNHISFQCENMAIVERRLKE-MKIDYVKSRVEEGGINVDQLFFH-DPDGSMIEICNC   79 (137)
Q Consensus        24 ~~~HIAF~VedId~v~~rLke-~GI~~~~~~~~~~g~g~r~vFf~-DPDGn~IEI~e~   79 (137)
                      ++.|++|.|.|++++.+.-++ +|.++....   ++    .+||+ |-....+.+...
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~---~~----~~~l~~~~~~~~l~l~~~   54 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTT---DN----GDLFRIDSRAWRIAVQQG   54 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEE---TT----EEEEESSSBSCSEEEEEC
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecC---Cc----ceEEeecCCceEEEEecC
Confidence            478999999999999998888 599887643   22    45565 444556766654