BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032619
MYCLLLSLMQHMSPRWYIRNFDYHEARMIHLSYHDGEHYNGVRLKEDSCIGSARPIIIKA
DADISAASIQSKTVTSKLKGAAGIINAGSIKLVMAGSGCENSEKVEEVLLQVGGDVDAAI
EFLIAEQGTEEYSVKKQ

High Scoring Gene Products

Symbol, full name Information P value
AT5G67170 protein from Arabidopsis thaliana 2.8e-34
DDB_G0267906
OTU domain containin protein 		gene from Dictyostelium discoideum 5.1e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032619
        (137 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2155588 - symbol:AT5G67170 species:3702 "Arabi...   372  2.8e-34   1
DICTYBASE|DDB_G0267906 - symbol:DDB_G0267906 "OTU domain ...    96  5.1e-08   2


>TAIR|locus:2155588 [details] [associations]
            symbol:AT5G67170 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            [GO:0008234 "cysteine-type peptidase activity" evidence=ISS]
            Pfam:PF02338 EMBL:CP002688 GO:GO:0006508 GO:GO:0008233
            InterPro:IPR003323 PROSITE:PS50802 InterPro:IPR004027 Pfam:PF02810
            UniGene:At.28821 UniGene:At.28822 MEROPS:C85.003 EMBL:JQ013452
            IPI:IPI00548219 RefSeq:NP_201518.2 ProteinModelPortal:F4K3M5
            SMR:F4K3M5 PRIDE:F4K3M5 EnsemblPlants:AT5G67170.1 GeneID:836852
            KEGG:ath:AT5G67170 KO:K13717 OMA:NREMFEP Uniprot:F4K3M5
        Length = 375

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 74/127 (58%), Positives = 89/127 (70%)

Query:     6 LSLMQHMSPRWYIRNFDYHEARMIHLSYHDGEHYNGVRLKEDSCIGSARPXXXXXXXXXX 65
             + + ++MSPRWYIRNF+    RMIHLSYHDGEHYN VR KED+C G ARP          
Sbjct:   122 ICIHRNMSPRWYIRNFEDTRTRMIHLSYHDGEHYNSVRSKEDACGGPARPVVIEADAKVS 181

Query:    66 XXXXQSKTVTSKLKGAAGI--INAGSIKLVMAGSGCENSEKVEEVLLQVGGDVDAAIEFL 123
                 Q+K   SK K  A    +NAG+IK+VM+GS C+N+EK E+VLLQV GDVDAAIEFL
Sbjct:   182 AASKQAKATESKSKNKADKCHVNAGAIKVVMSGSCCDNTEKAEQVLLQVNGDVDAAIEFL 241

Query:   124 IAEQGTE 130
             IA+QG E
Sbjct:   242 IADQGME 248


>DICTYBASE|DDB_G0267906 [details] [associations]
            symbol:DDB_G0267906 "OTU domain containin protein"
            species:44689 "Dictyostelium discoideum" [GO:0008150
            "biological_process" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
            dictyBase:DDB_G0267906 Pfam:PF02338 EMBL:AAFI02000003
            InterPro:IPR003323 PROSITE:PS50802 eggNOG:COG5539
            RefSeq:XP_647399.1 ProteinModelPortal:Q55FY4 MEROPS:C85.003
            EnsemblProtists:DDB0304419 GeneID:8616206 KEGG:ddi:DDB_G0267906
            InParanoid:Q55FY4 OMA:MREDATW Uniprot:Q55FY4
        Length = 438

 Score = 96 (38.9 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
 Identities = 20/43 (46%), Positives = 27/43 (62%)

Query:     2 YCLLLSLMQHMSPRWYIRN-FDYHEARMIHLSYHDGEHYNGVR 43
             Y + +++ Q   PRW I N F   + + IHLSYH+ EHYN VR
Sbjct:   147 YNVNITIHQMDQPRWEIVNHFPPEKNKTIHLSYHNDEHYNSVR 189

 Score = 58 (25.5 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
 Identities = 14/55 (25%), Positives = 32/55 (58%)

Query:    80 GAAGIINAGSIKLVMAGSGCENSEKVEEVLLQVGGDVDAAIEFLIAEQGTEEYSV 134
             G +G     S+  +M  +G  + + ++E L+    +++AA+E+L+A   +++ SV
Sbjct:   258 GNSGNFIDDSVYEIMTLTGETSVKNIKEALIDCNYNIEAAVEYLLALSLSKDDSV 312


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.133   0.387    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      137       123   0.00091  102 3  11 22  0.39    31
                                                     29  0.50    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  568 (60 KB)
  Total size of DFA:  129 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.91u 0.19s 10.10t   Elapsed:  00:00:01
  Total cpu time:  9.91u 0.19s 10.10t   Elapsed:  00:00:01
  Start:  Thu May  9 18:19:27 2013   End:  Thu May  9 18:19:28 2013

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