Query 032621
Match_columns 137
No_of_seqs 119 out of 1045
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 05:34:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032621.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032621hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tq1_A AT5G66040, senescence-a 100.0 2.6E-29 9.1E-34 164.8 10.8 116 8-125 13-128 (129)
2 3iwh_A Rhodanese-like domain p 100.0 1.3E-29 4.3E-34 160.5 7.9 99 13-126 2-102 (103)
3 3gk5_A Uncharacterized rhodane 100.0 1.4E-28 4.9E-33 156.8 10.3 102 12-129 3-104 (108)
4 1gmx_A GLPE protein; transfera 100.0 2.6E-28 8.9E-33 155.4 10.2 104 10-128 2-106 (108)
5 3foj_A Uncharacterized protein 100.0 1.3E-28 4.5E-33 154.8 8.1 97 13-124 2-100 (100)
6 3eme_A Rhodanese-like domain p 100.0 1.5E-28 5E-33 155.3 8.2 99 13-126 2-102 (103)
7 3d1p_A Putative thiosulfate su 100.0 4.8E-28 1.7E-32 160.4 10.1 116 9-126 19-138 (139)
8 3hix_A ALR3790 protein; rhodan 99.9 8.6E-28 2.9E-32 152.6 8.7 98 19-129 2-102 (106)
9 3ilm_A ALR3790 protein; rhodan 99.9 1.6E-27 5.3E-32 158.7 10.2 102 14-128 1-105 (141)
10 1qxn_A SUD, sulfide dehydrogen 99.9 3.6E-27 1.2E-31 156.1 11.4 109 11-131 21-134 (137)
11 2hhg_A Hypothetical protein RP 99.9 6.5E-27 2.2E-31 154.9 10.8 107 10-129 19-136 (139)
12 2k0z_A Uncharacterized protein 99.9 5.2E-27 1.8E-31 149.9 5.9 99 13-128 5-104 (110)
13 3flh_A Uncharacterized protein 99.9 5.5E-26 1.9E-30 148.0 8.4 100 13-127 15-120 (124)
14 3nhv_A BH2092 protein; alpha-b 99.9 4.2E-26 1.4E-30 152.2 7.6 103 13-129 16-123 (144)
15 1wv9_A Rhodanese homolog TT165 99.9 5.3E-27 1.8E-31 145.9 3.0 93 13-121 2-94 (94)
16 2fsx_A RV0390, COG0607: rhodan 99.9 2.7E-25 9.1E-30 148.8 9.9 113 11-128 3-141 (148)
17 3g5j_A Putative ATP/GTP bindin 99.9 2E-24 6.9E-29 141.5 8.7 104 11-120 3-130 (134)
18 1t3k_A Arath CDC25, dual-speci 99.9 6.5E-25 2.2E-29 147.6 6.5 109 10-128 25-143 (152)
19 1e0c_A Rhodanese, sulfurtransf 99.9 8.4E-24 2.9E-28 153.7 12.7 115 13-129 9-132 (271)
20 1vee_A Proline-rich protein fa 99.9 2.3E-24 7.9E-29 142.0 7.4 110 12-129 4-127 (134)
21 3i2v_A Adenylyltransferase and 99.9 1.4E-24 4.8E-29 141.2 6.2 105 13-123 1-122 (127)
22 1urh_A 3-mercaptopyruvate sulf 99.9 1.3E-23 4.4E-28 153.4 11.6 115 13-129 4-137 (280)
23 1e0c_A Rhodanese, sulfurtransf 99.9 9.6E-24 3.3E-28 153.3 10.4 112 13-126 147-271 (271)
24 2jtq_A Phage shock protein E; 99.9 4.1E-24 1.4E-28 130.4 6.4 76 28-117 2-78 (85)
25 3hzu_A Thiosulfate sulfurtrans 99.9 3.2E-23 1.1E-27 154.1 12.1 115 12-128 39-161 (318)
26 1urh_A 3-mercaptopyruvate sulf 99.9 2.5E-23 8.4E-28 151.9 10.2 114 11-126 150-278 (280)
27 1rhs_A Sulfur-substituted rhod 99.9 1E-22 3.4E-27 149.9 13.4 116 12-129 159-291 (296)
28 3hzu_A Thiosulfate sulfurtrans 99.9 5.6E-23 1.9E-27 152.8 12.0 116 13-131 179-313 (318)
29 1c25_A CDC25A; hydrolase, cell 99.9 5.3E-23 1.8E-27 139.2 10.1 107 9-128 19-149 (161)
30 1yt8_A Thiosulfate sulfurtrans 99.9 8.5E-23 2.9E-27 161.1 12.3 107 9-128 3-112 (539)
31 1uar_A Rhodanese; sulfurtransf 99.9 1.1E-22 3.9E-27 148.6 12.1 113 13-127 146-283 (285)
32 1rhs_A Sulfur-substituted rhod 99.9 1.8E-22 6E-27 148.6 12.7 115 12-128 7-144 (296)
33 3olh_A MST, 3-mercaptopyruvate 99.9 9.3E-23 3.2E-27 150.6 11.2 111 12-124 174-299 (302)
34 1qb0_A Protein (M-phase induce 99.9 1.9E-22 6.6E-27 142.1 11.4 107 9-128 40-171 (211)
35 3olh_A MST, 3-mercaptopyruvate 99.9 2.6E-22 9E-27 148.2 12.6 115 12-128 21-159 (302)
36 4f67_A UPF0176 protein LPG2838 99.9 1.3E-22 4.5E-27 147.1 10.5 102 10-121 119-223 (265)
37 3aay_A Putative thiosulfate su 99.9 1.6E-22 5.4E-27 147.3 10.5 115 13-129 6-128 (277)
38 3aay_A Putative thiosulfate su 99.9 2.5E-22 8.6E-27 146.3 11.3 111 14-127 145-276 (277)
39 2a2k_A M-phase inducer phospha 99.9 2.9E-22 9.8E-27 137.3 10.8 107 9-128 20-151 (175)
40 1uar_A Rhodanese; sulfurtransf 99.9 7E-23 2.4E-27 149.7 8.1 115 12-128 7-129 (285)
41 3op3_A M-phase inducer phospha 99.9 5.5E-22 1.9E-26 140.2 11.5 105 10-126 54-182 (216)
42 1okg_A Possible 3-mercaptopyru 99.9 2.9E-22 1E-26 151.8 10.5 113 12-128 13-145 (373)
43 2vsw_A Dual specificity protei 99.9 1.2E-22 4.1E-27 136.3 6.9 113 13-127 4-134 (153)
44 2j6p_A SB(V)-AS(V) reductase; 99.9 3.3E-22 1.1E-26 134.3 9.0 107 10-126 2-122 (152)
45 2eg4_A Probable thiosulfate su 99.9 5.1E-22 1.7E-26 141.3 9.0 99 13-126 121-230 (230)
46 3tp9_A Beta-lactamase and rhod 99.9 4.4E-22 1.5E-26 154.6 8.7 102 11-126 372-474 (474)
47 2ouc_A Dual specificity protei 99.9 9.9E-22 3.4E-26 129.7 9.0 109 14-128 2-140 (142)
48 2wlr_A Putative thiosulfate su 99.9 1.8E-21 6.3E-26 149.5 11.9 115 13-129 272-409 (423)
49 1yt8_A Thiosulfate sulfurtrans 99.9 1.8E-21 6.2E-26 153.5 11.4 107 10-130 374-481 (539)
50 2wlr_A Putative thiosulfate su 99.9 1.8E-21 6.1E-26 149.5 9.6 114 13-128 124-252 (423)
51 3f4a_A Uncharacterized protein 99.9 3.2E-22 1.1E-26 136.6 4.9 115 8-126 26-158 (169)
52 1hzm_A Dual specificity protei 99.8 2.5E-21 8.4E-26 129.9 7.0 110 7-120 10-142 (154)
53 3tg1_B Dual specificity protei 99.8 5.7E-20 2E-24 124.0 10.1 113 8-126 6-148 (158)
54 3ics_A Coenzyme A-disulfide re 99.8 1.1E-20 3.8E-25 149.9 7.2 97 10-121 486-582 (588)
55 1whb_A KIAA0055; deubiqutinati 99.8 3.5E-19 1.2E-23 120.0 12.0 121 5-130 7-150 (157)
56 3ntd_A FAD-dependent pyridine 99.8 1.2E-20 4.1E-25 148.8 4.6 95 11-121 471-565 (565)
57 3utn_X Thiosulfate sulfurtrans 99.8 4.6E-19 1.6E-23 132.1 12.5 118 8-128 23-162 (327)
58 1okg_A Possible 3-mercaptopyru 99.8 6.2E-20 2.1E-24 139.1 7.4 101 25-127 172-295 (373)
59 3utn_X Thiosulfate sulfurtrans 99.8 1.9E-18 6.6E-23 128.7 11.6 109 13-123 184-319 (327)
60 3tp9_A Beta-lactamase and rhod 99.8 3.7E-19 1.3E-23 138.2 7.7 104 9-126 269-372 (474)
61 2eg4_A Probable thiosulfate su 99.8 1.7E-18 5.8E-23 123.1 8.9 93 27-128 6-105 (230)
62 2gwf_A Ubiquitin carboxyl-term 99.8 3.8E-18 1.3E-22 115.0 10.0 115 8-126 15-151 (157)
63 3r2u_A Metallo-beta-lactamase 99.7 1.2E-19 4.3E-24 140.8 0.0 86 20-119 379-465 (466)
64 3r2u_A Metallo-beta-lactamase 99.5 3.1E-14 1.1E-18 110.5 7.5 80 26-118 295-375 (466)
65 2f46_A Hypothetical protein; s 98.3 2.3E-06 7.8E-11 56.9 6.3 85 14-105 29-129 (156)
66 4erc_A Dual specificity protei 97.3 0.0005 1.7E-08 44.6 5.5 90 16-105 24-117 (150)
67 2img_A Dual specificity protei 96.8 0.0021 7.1E-08 41.6 5.2 87 16-105 25-118 (151)
68 1ywf_A Phosphotyrosine protein 96.4 0.032 1.1E-06 40.7 9.5 44 13-56 54-102 (296)
69 1xri_A AT1G05000; structural g 96.3 0.0066 2.2E-07 39.4 5.0 90 16-105 22-120 (151)
70 2r0b_A Serine/threonine/tyrosi 95.9 0.04 1.4E-06 35.7 7.4 82 23-105 29-119 (154)
71 3rgo_A Protein-tyrosine phosph 95.8 0.011 3.7E-07 38.4 4.2 88 18-105 18-118 (157)
72 1yz4_A DUSP15, dual specificit 95.6 0.029 9.9E-07 36.7 5.7 79 23-105 29-113 (160)
73 1zzw_A Dual specificity protei 95.5 0.022 7.5E-07 36.8 4.6 80 25-105 27-112 (149)
74 2wgp_A Dual specificity protei 95.4 0.042 1.4E-06 37.2 6.2 77 25-104 49-131 (190)
75 1wrm_A Dual specificity phosph 95.3 0.047 1.6E-06 36.0 6.0 76 25-104 30-111 (165)
76 2hcm_A Dual specificity protei 95.3 0.027 9.2E-07 37.0 4.8 78 25-105 35-118 (164)
77 1fpz_A Cyclin-dependent kinase 95.3 0.055 1.9E-06 37.1 6.5 89 17-105 61-163 (212)
78 3ezz_A Dual specificity protei 95.2 0.09 3.1E-06 33.6 6.9 79 25-105 27-110 (144)
79 2nt2_A Protein phosphatase sli 94.8 0.08 2.8E-06 33.9 5.9 78 23-104 25-109 (145)
80 2esb_A Dual specificity protei 94.6 0.11 3.6E-06 35.1 6.3 78 25-105 43-126 (188)
81 2e0t_A Dual specificity phosph 94.4 0.059 2E-06 34.7 4.5 80 25-105 25-114 (151)
82 3s4e_A Dual specificity protei 94.2 0.11 3.8E-06 33.2 5.5 78 25-105 27-110 (144)
83 3f81_A Dual specificity protei 94.1 0.077 2.6E-06 35.4 4.7 80 26-105 52-144 (183)
84 2oud_A Dual specificity protei 94.1 0.07 2.4E-06 35.6 4.5 79 25-105 31-116 (177)
85 3s4o_A Protein tyrosine phosph 93.8 0.19 6.5E-06 32.6 6.1 88 15-105 34-138 (167)
86 3rz2_A Protein tyrosine phosph 93.8 0.23 7.7E-06 33.4 6.6 88 15-105 48-145 (189)
87 2g6z_A Dual specificity protei 93.7 0.19 6.5E-06 34.7 6.2 76 26-104 30-111 (211)
88 2i6j_A Ssoptp, sulfolobus solf 93.7 0.13 4.4E-06 33.3 5.1 74 17-96 18-107 (161)
89 2j16_A SDP-1, tyrosine-protein 92.8 0.16 5.6E-06 34.2 4.6 74 28-104 67-145 (182)
90 2hxp_A Dual specificity protei 92.6 0.075 2.6E-06 34.6 2.6 78 23-104 27-113 (155)
91 3emu_A Leucine rich repeat and 92.6 0.15 5E-06 33.5 4.0 78 25-105 33-116 (161)
92 1yn9_A BVP, polynucleotide 5'- 92.3 0.37 1.3E-05 31.6 5.8 91 14-105 43-142 (169)
93 2pq5_A Dual specificity protei 91.7 1 3.5E-05 30.6 7.7 76 25-104 69-159 (205)
94 1rxd_A Protein tyrosine phosph 91.4 0.64 2.2E-05 29.7 6.1 89 14-105 26-124 (159)
95 2y96_A Dual specificity phosph 91.1 1.2 4E-05 30.8 7.5 77 25-104 77-167 (219)
96 2q05_A Late protein H1, dual s 89.9 0.99 3.4E-05 30.4 6.2 75 28-105 75-154 (195)
97 1v8c_A MOAD related protein; r 89.8 0.038 1.3E-06 37.1 -1.0 23 28-56 122-144 (168)
98 1ohe_A CDC14B, CDC14B2 phospha 87.9 3.6 0.00012 30.5 8.5 82 16-104 206-297 (348)
99 3nme_A Ptpkis1 protein, SEX4 g 87.8 1.6 5.5E-05 31.5 6.4 89 16-104 28-134 (294)
100 3cm3_A Late protein H1, dual s 87.6 0.76 2.6E-05 30.3 4.3 75 28-105 58-137 (176)
101 3gxh_A Putative phosphatase (D 87.5 1.9 6.6E-05 27.9 6.2 89 13-105 26-124 (157)
102 2c46_A MRNA capping enzyme; ph 87.4 1.1 3.6E-05 31.6 5.1 86 14-105 66-170 (241)
103 2jgn_A DBX, DDX3, ATP-dependen 85.1 2.2 7.6E-05 28.2 5.6 38 77-115 44-81 (185)
104 2hjv_A ATP-dependent RNA helic 81.7 1.7 5.8E-05 28.0 3.8 36 78-114 34-69 (163)
105 1jzt_A Hypothetical 27.5 kDa p 81.2 4.3 0.00015 28.6 6.0 45 80-125 59-117 (246)
106 3rh0_A Arsenate reductase; oxi 80.8 1.5 5.3E-05 28.4 3.3 35 80-114 21-56 (148)
107 1jl3_A Arsenate reductase; alp 80.6 1.6 5.3E-05 27.9 3.3 36 80-115 4-40 (139)
108 3rof_A Low molecular weight pr 80.0 0.88 3E-05 29.9 2.0 38 80-117 7-49 (158)
109 3d3k_A Enhancer of mRNA-decapp 79.7 2.5 8.4E-05 30.1 4.3 30 80-110 86-118 (259)
110 1u2p_A Ptpase, low molecular w 79.6 0.89 3E-05 29.9 1.9 38 80-117 5-48 (163)
111 1fuk_A Eukaryotic initiation f 79.6 4.4 0.00015 26.0 5.3 36 78-114 29-64 (165)
112 4fak_A Ribosomal RNA large sub 79.4 3.7 0.00013 27.2 4.9 45 71-115 66-115 (163)
113 1t5i_A C_terminal domain of A 79.2 2.3 7.8E-05 27.8 3.8 37 78-115 30-66 (172)
114 2l17_A Synarsc, arsenate reduc 78.6 2.2 7.6E-05 27.0 3.5 35 81-115 6-41 (134)
115 2rb4_A ATP-dependent RNA helic 78.5 2.4 8.3E-05 27.6 3.8 36 78-114 33-68 (175)
116 4etn_A LMPTP, low molecular we 78.5 0.6 2E-05 31.6 0.8 38 80-117 35-76 (184)
117 3d3j_A Enhancer of mRNA-decapp 78.3 2.8 9.5E-05 30.6 4.3 30 80-110 133-165 (306)
118 4a29_A Engineered retro-aldol 78.2 8.4 0.00029 27.4 6.6 89 15-107 137-230 (258)
119 1jf8_A Arsenate reductase; ptp 78.2 2.1 7.1E-05 27.0 3.2 36 80-115 4-40 (131)
120 2o8n_A APOA-I binding protein; 78.0 2.8 9.7E-05 29.9 4.2 30 80-110 80-112 (265)
121 2cwd_A Low molecular weight ph 77.9 0.66 2.2E-05 30.5 0.8 39 79-117 4-48 (161)
122 1p8a_A Protein tyrosine phosph 77.8 0.28 9.4E-06 31.8 -1.0 38 80-117 5-43 (146)
123 2gi4_A Possible phosphotyrosin 75.4 0.63 2.2E-05 30.5 0.2 37 81-117 3-45 (156)
124 3to5_A CHEY homolog; alpha(5)b 74.5 7 0.00024 24.6 5.0 42 77-118 10-51 (134)
125 1d1q_A Tyrosine phosphatase (E 74.5 0.87 3E-05 29.9 0.7 38 80-117 8-52 (161)
126 2p6n_A ATP-dependent RNA helic 73.5 6.6 0.00023 26.1 5.0 35 79-114 54-88 (191)
127 3jvi_A Protein tyrosine phosph 73.0 1.1 3.9E-05 29.4 1.0 38 80-117 5-48 (161)
128 3eaq_A Heat resistant RNA depe 73.0 5.1 0.00018 27.0 4.4 38 77-115 29-66 (212)
129 1to0_A Hypothetical UPF0247 pr 72.9 6.7 0.00023 26.0 4.7 47 69-115 60-111 (167)
130 3v0d_A Voltage-sensor containi 72.8 4 0.00014 30.2 4.0 88 15-103 50-145 (339)
131 3n8i_A Low molecular weight ph 72.6 0.96 3.3E-05 29.7 0.5 38 80-117 6-49 (157)
132 1y1l_A Arsenate reductase (ARS 72.4 4.1 0.00014 25.3 3.5 33 81-114 1-34 (124)
133 2wmy_A WZB, putative acid phos 69.5 4.6 0.00016 26.0 3.3 35 80-115 9-44 (150)
134 3nbm_A PTS system, lactose-spe 68.5 5 0.00017 24.5 3.2 32 78-110 5-40 (108)
135 3czc_A RMPB; alpha/beta sandwi 68.1 4.8 0.00016 24.5 3.0 26 80-105 19-49 (110)
136 3t38_A Arsenate reductase; low 67.6 4 0.00014 28.2 2.8 36 79-114 81-117 (213)
137 2wja_A Putative acid phosphata 67.4 5 0.00017 26.5 3.2 35 80-115 27-62 (168)
138 3rss_A Putative uncharacterize 67.1 7.4 0.00025 30.3 4.6 47 78-125 51-110 (502)
139 2fek_A Low molecular weight pr 66.9 5.6 0.00019 26.2 3.4 35 80-115 23-58 (167)
140 3ohg_A Uncharacterized protein 66.9 6.6 0.00023 28.3 4.0 27 89-115 218-244 (285)
141 2i4i_A ATP-dependent RNA helic 66.5 11 0.00036 27.6 5.2 39 76-115 273-311 (417)
142 2v1x_A ATP-dependent DNA helic 66.3 8.8 0.0003 30.4 4.9 37 78-115 266-302 (591)
143 2d7d_A Uvrabc system protein B 65.7 10 0.00035 30.4 5.3 46 68-114 434-479 (661)
144 1vdm_A Purine phosphoribosyltr 64.9 6.8 0.00023 24.9 3.5 31 78-108 82-115 (153)
145 1c4o_A DNA nucleotide excision 64.2 9.9 0.00034 30.5 4.9 46 68-114 428-473 (664)
146 1vch_A Phosphoribosyltransfera 64.1 8.4 0.00029 25.1 3.9 31 78-108 119-152 (175)
147 1vkr_A Mannitol-specific PTS s 63.9 5.6 0.00019 24.9 2.8 26 79-104 13-43 (125)
148 1oyw_A RECQ helicase, ATP-depe 63.4 12 0.00042 28.9 5.2 37 78-115 235-271 (523)
149 3tsm_A IGPS, indole-3-glycerol 63.2 31 0.0011 24.6 6.9 88 16-107 154-246 (272)
150 1tvm_A PTS system, galactitol- 63.1 6.5 0.00022 24.0 3.0 26 80-105 22-52 (113)
151 1zn8_A APRT, adenine phosphori 62.2 9.5 0.00033 25.0 3.9 32 77-108 118-152 (180)
152 3fwz_A Inner membrane protein 62.2 10 0.00034 23.6 3.8 31 82-113 9-39 (140)
153 1i5e_A Uracil phosphoribosyltr 61.5 12 0.00041 25.5 4.4 33 78-110 123-158 (209)
154 1o6d_A Hypothetical UPF0247 pr 60.6 14 0.00048 24.4 4.4 48 69-117 55-107 (163)
155 1hv8_A Putative ATP-dependent 60.1 19 0.00065 25.5 5.5 39 76-115 235-273 (367)
156 3kkj_A Amine oxidase, flavin-c 59.7 11 0.00039 24.7 4.0 28 83-111 5-32 (336)
157 2dy0_A APRT, adenine phosphori 59.1 11 0.00039 24.9 3.8 49 77-125 124-182 (190)
158 2geb_A Hypoxanthine-guanine ph 59.0 11 0.00036 25.0 3.7 31 78-108 97-130 (185)
159 3i32_A Heat resistant RNA depe 58.7 14 0.00047 26.6 4.5 36 78-114 27-62 (300)
160 2yjt_D ATP-dependent RNA helic 63.2 2 6.9E-05 27.9 0.0 37 78-115 29-65 (170)
161 2l2q_A PTS system, cellobiose- 58.6 4.2 0.00014 24.6 1.5 27 79-105 4-34 (109)
162 1y0b_A Xanthine phosphoribosyl 58.6 12 0.0004 25.0 3.8 32 77-108 118-152 (197)
163 1id1_A Putative potassium chan 58.6 12 0.00042 23.5 3.8 29 83-112 6-34 (153)
164 1xti_A Probable ATP-dependent 58.1 10 0.00036 27.4 3.8 36 78-114 249-284 (391)
165 1z5z_A Helicase of the SNF2/RA 57.8 15 0.00051 25.9 4.5 38 76-114 109-147 (271)
166 1g2q_A Adenine phosphoribosylt 57.7 12 0.00043 24.7 3.8 32 77-108 120-154 (187)
167 3jx9_A Putative phosphoheptose 57.5 17 0.00057 24.1 4.4 34 76-110 75-110 (170)
168 1e2b_A Enzyme IIB-cellobiose; 57.1 6.7 0.00023 23.7 2.2 26 80-105 4-33 (106)
169 1hgx_A HGXPRTASE, hypoxanthine 56.9 12 0.00042 24.6 3.7 32 78-109 94-128 (183)
170 1l1q_A Adenine phosphoribosylt 56.9 16 0.00054 24.1 4.3 32 77-108 115-151 (186)
171 1wp9_A ATP-dependent RNA helic 56.8 21 0.00073 26.1 5.4 35 77-112 359-393 (494)
172 3mmj_A MYO-inositol hexaphosph 56.5 32 0.0011 25.1 6.1 27 68-95 203-230 (314)
173 1dku_A Protein (phosphoribosyl 56.2 15 0.0005 26.8 4.3 34 78-111 216-252 (317)
174 1ufr_A TT1027, PYR mRNA-bindin 55.8 13 0.00044 24.4 3.6 31 78-108 95-129 (181)
175 3m3h_A OPRT, oprtase, orotate 55.7 24 0.00081 24.5 5.1 51 76-126 134-194 (234)
176 1wd5_A Hypothetical protein TT 55.7 14 0.00048 24.8 3.9 32 78-109 119-153 (208)
177 3pey_A ATP-dependent RNA helic 55.5 19 0.00065 25.8 4.9 38 77-115 241-278 (395)
178 1d5r_A Phosphoinositide phosph 55.4 12 0.0004 27.3 3.6 89 14-103 41-137 (324)
179 1yfz_A Hypoxanthine-guanine ph 55.3 13 0.00045 25.0 3.7 31 78-108 117-150 (205)
180 3llv_A Exopolyphosphatase-rela 55.2 16 0.00053 22.5 3.8 30 83-113 9-38 (141)
181 1pzm_A HGPRT, hypoxanthine-gua 54.1 14 0.00049 25.0 3.7 31 78-108 117-150 (211)
182 3jux_A Protein translocase sub 54.0 16 0.00056 30.3 4.5 38 77-115 472-509 (822)
183 1a3c_A PYRR, pyrimidine operon 53.6 14 0.00049 24.1 3.6 31 78-108 97-131 (181)
184 1s2m_A Putative ATP-dependent 53.4 11 0.00038 27.4 3.3 37 78-115 257-293 (400)
185 1tc1_A Protein (hypoxanthine p 53.4 15 0.0005 25.3 3.7 32 78-109 102-136 (220)
186 1o5o_A Uracil phosphoribosyltr 52.9 20 0.00068 24.8 4.3 33 78-110 135-170 (221)
187 1xxa_A ARGR, arginine represso 52.8 14 0.00048 21.1 3.0 27 76-102 47-73 (78)
188 4egs_A Ribose 5-phosphate isom 52.7 13 0.00044 24.7 3.2 37 80-117 35-76 (180)
189 4dgk_A Phytoene dehydrogenase; 52.5 14 0.00048 27.9 3.8 30 80-111 2-31 (501)
190 4etm_A LMPTP, low molecular we 52.5 11 0.00038 24.9 2.9 37 81-117 20-62 (173)
191 3fht_A ATP-dependent RNA helic 52.4 13 0.00044 27.1 3.5 36 78-114 265-300 (412)
192 1u9y_A RPPK;, ribose-phosphate 52.1 19 0.00066 25.7 4.3 31 78-108 204-237 (284)
193 1ao0_A Glutamine phosphoribosy 52.0 19 0.00065 27.5 4.4 34 78-111 337-373 (459)
194 2wns_A Orotate phosphoribosylt 51.6 20 0.00069 24.1 4.2 49 77-125 109-166 (205)
195 1ns5_A Hypothetical protein YB 51.2 21 0.00072 23.3 4.0 44 71-116 59-107 (155)
196 1b4b_A Arginine repressor; cor 51.0 13 0.00044 20.8 2.6 26 76-101 44-69 (71)
197 2zfz_A Arginine repressor; DNA 50.9 14 0.0005 21.0 2.9 26 76-101 52-77 (79)
198 2j0s_A ATP-dependent RNA helic 50.6 14 0.00049 26.9 3.5 37 78-115 275-311 (410)
199 3dez_A OPRT, oprtase, orotate 50.6 23 0.0008 24.7 4.4 50 76-125 146-205 (243)
200 2p1z_A Phosphoribosyltransfera 49.3 17 0.00058 23.9 3.4 50 77-126 112-170 (180)
201 2aee_A OPRT, oprtase, orotate 48.9 20 0.0007 24.1 3.8 31 77-107 115-148 (211)
202 1ecf_A Glutamine phosphoribosy 48.8 24 0.00084 27.3 4.7 33 78-110 358-393 (504)
203 1tf5_A Preprotein translocase 48.5 18 0.00062 30.2 4.0 38 77-115 430-467 (844)
204 2ywu_A Hypoxanthine-guanine ph 48.4 21 0.00072 23.6 3.8 31 78-108 94-127 (181)
205 2fsf_A Preprotein translocase 48.3 32 0.0011 28.8 5.4 38 77-115 439-476 (853)
206 2e55_A Uracil phosphoribosyltr 47.9 20 0.0007 24.4 3.7 32 78-109 120-154 (208)
207 3n0a_A Tyrosine-protein phosph 47.7 22 0.00076 26.4 4.1 83 17-104 49-142 (361)
208 3hvu_A Hypoxanthine phosphorib 47.4 25 0.00084 23.9 4.0 31 78-108 115-148 (204)
209 1wy5_A TILS, hypothetical UPF0 47.4 48 0.0017 23.7 5.9 38 68-105 11-54 (317)
210 4h3k_B RNA polymerase II subun 47.3 26 0.00089 24.1 4.0 29 81-110 27-56 (214)
211 1v9s_A Uracil phosphoribosyltr 46.7 22 0.00074 24.3 3.7 31 79-109 123-156 (208)
212 1qb7_A APRT, adenine phosphori 46.6 25 0.00085 24.3 4.0 32 77-108 136-170 (236)
213 2jbh_A Phosphoribosyltransfera 46.4 22 0.00075 24.3 3.7 31 78-108 133-166 (225)
214 3eiq_A Eukaryotic initiation f 46.3 15 0.00052 26.7 3.1 37 78-115 279-315 (414)
215 1w30_A PYRR bifunctional prote 46.3 22 0.00074 23.9 3.6 31 78-108 111-145 (201)
216 3ipz_A Monothiol glutaredoxin- 45.9 45 0.0015 19.7 5.2 38 67-105 6-49 (109)
217 2l69_A Rossmann 2X3 fold prote 45.9 46 0.0016 19.9 9.0 86 19-111 17-108 (134)
218 2p5m_A Arginine repressor; alp 45.7 15 0.00052 21.1 2.4 26 76-101 56-81 (83)
219 2rkb_A Serine dehydratase-like 45.6 42 0.0014 24.0 5.3 65 50-114 24-88 (318)
220 1fsg_A HGPRTASE, hypoxanthine- 45.6 23 0.00079 24.4 3.8 31 78-108 141-174 (233)
221 2yzk_A OPRT, oprtase, orotate 45.6 25 0.00087 23.0 3.8 48 78-125 105-161 (178)
222 3o7m_A Hypoxanthine phosphorib 44.8 25 0.00085 23.4 3.7 31 78-108 93-126 (186)
223 3ohp_A Hypoxanthine phosphorib 44.8 25 0.00086 23.1 3.7 31 78-108 90-123 (177)
224 2j48_A Two-component sensor ki 44.7 41 0.0014 18.9 4.5 14 97-111 39-52 (119)
225 1nkt_A Preprotein translocase 44.4 34 0.0012 28.8 5.0 38 77-115 458-495 (922)
226 3vc3_A Beta-cyanoalnine syntha 43.9 55 0.0019 23.8 5.8 63 50-112 52-119 (344)
227 3s5j_B Ribose-phosphate pyroph 43.6 27 0.00093 25.6 4.0 44 78-121 212-265 (326)
228 2b4a_A BH3024; flavodoxin-like 43.3 46 0.0016 19.7 4.6 38 79-117 15-52 (138)
229 3l4b_C TRKA K+ channel protien 43.1 23 0.00078 23.7 3.3 29 83-112 3-31 (218)
230 2ehj_A Uracil phosphoribosyltr 42.8 24 0.00082 24.1 3.4 31 79-109 123-156 (208)
231 3dah_A Ribose-phosphate pyroph 42.8 31 0.0011 25.2 4.2 33 78-110 215-250 (319)
232 2ps1_A Orotate phosphoribosylt 42.7 29 0.00099 23.7 3.9 30 78-107 124-156 (226)
233 2g1u_A Hypothetical protein TM 42.2 42 0.0014 20.9 4.4 29 83-112 22-50 (155)
234 2gk4_A Conserved hypothetical 41.5 34 0.0012 23.8 4.1 24 88-112 28-51 (232)
235 3gl9_A Response regulator; bet 41.4 50 0.0017 19.2 4.5 13 98-111 41-53 (122)
236 3o8b_A HCV NS3 protease/helica 41.1 22 0.00075 28.8 3.4 37 78-115 395-431 (666)
237 3i5x_A ATP-dependent RNA helic 41.1 40 0.0014 25.9 4.9 37 77-114 337-376 (563)
238 1lss_A TRK system potassium up 40.8 33 0.0011 20.5 3.7 29 83-112 7-35 (140)
239 3mm4_A Histidine kinase homolo 40.8 48 0.0017 21.7 4.7 39 79-117 61-99 (206)
240 3p9y_A CG14216, LD40846P; phos 40.6 39 0.0013 23.0 4.0 30 80-110 10-40 (198)
241 1k92_A Argininosuccinate synth 40.4 35 0.0012 26.3 4.3 29 77-105 8-36 (455)
242 2b49_A Protein tyrosine phosph 40.2 42 0.0014 23.8 4.5 29 68-96 198-227 (287)
243 3dmp_A Uracil phosphoribosyltr 40.1 37 0.0013 23.3 4.1 41 79-119 129-179 (217)
244 1z7g_A HGPRT, HGPRTASE, hypoxa 40.0 26 0.00089 23.8 3.3 31 78-108 125-158 (217)
245 3mwy_W Chromo domain-containin 39.9 44 0.0015 27.3 5.1 39 76-115 569-607 (800)
246 2zsj_A Threonine synthase; PLP 39.5 54 0.0018 23.8 5.1 64 50-113 49-112 (352)
247 4atq_A 4-aminobutyrate transam 39.2 22 0.00076 27.1 3.1 52 67-118 111-165 (456)
248 3lrt_A Ribose-phosphate pyroph 39.0 37 0.0013 24.3 4.0 31 78-108 202-235 (286)
249 4e3q_A Pyruvate transaminase; 39.0 56 0.0019 25.0 5.3 51 67-117 115-173 (473)
250 2ji4_A Phosphoribosyl pyrophos 38.9 34 0.0012 25.6 4.0 32 78-109 271-305 (379)
251 3tum_A Shikimate dehydrogenase 38.9 88 0.003 22.0 6.0 46 68-114 112-159 (269)
252 3sqw_A ATP-dependent RNA helic 38.8 45 0.0015 25.9 4.8 37 77-114 286-325 (579)
253 1npy_A Hypothetical shikimate 38.7 87 0.003 22.0 6.0 45 68-113 107-152 (271)
254 2d1f_A Threonine synthase; ami 38.5 56 0.0019 23.9 5.1 64 50-113 55-118 (360)
255 2bcg_G Secretory pathway GDP d 38.4 34 0.0012 25.7 4.0 28 83-111 14-41 (453)
256 3f6p_A Transcriptional regulat 38.3 57 0.002 18.8 4.5 14 97-111 40-53 (120)
257 2der_A TRNA-specific 2-thiouri 38.1 27 0.00091 26.1 3.3 29 77-105 15-43 (380)
258 1jdq_A TM006 protein, hypothet 38.0 62 0.0021 19.1 5.9 42 67-110 42-83 (98)
259 2lpm_A Two-component response 37.8 46 0.0016 20.4 3.9 25 81-105 10-34 (123)
260 1yks_A Genome polyprotein [con 37.8 36 0.0012 25.6 4.0 34 78-112 176-209 (440)
261 3k5w_A Carbohydrate kinase; 11 37.7 42 0.0015 25.9 4.4 48 76-125 43-103 (475)
262 1p5j_A L-serine dehydratase; l 37.6 45 0.0016 24.6 4.5 65 50-114 63-127 (372)
263 2db3_A ATP-dependent RNA helic 37.4 32 0.0011 25.7 3.7 34 80-114 301-334 (434)
264 2oyc_A PLP phosphatase, pyrido 37.4 97 0.0033 21.5 6.1 77 8-105 2-80 (306)
265 3grc_A Sensor protein, kinase; 37.1 64 0.0022 19.0 4.6 13 98-111 45-57 (140)
266 3lte_A Response regulator; str 37.0 61 0.0021 18.8 4.4 13 98-111 45-57 (132)
267 3aey_A Threonine synthase; PLP 36.8 56 0.0019 23.7 4.9 64 50-113 47-110 (351)
268 3fpn_A Geobacillus stearotherm 36.4 45 0.0015 20.6 3.6 44 66-112 7-55 (119)
269 3oz2_A Digeranylgeranylglycero 36.1 41 0.0014 23.9 4.0 28 83-111 7-34 (397)
270 4h27_A L-serine dehydratase/L- 35.9 48 0.0016 24.4 4.4 64 50-113 63-126 (364)
271 3hdv_A Response regulator; PSI 35.9 67 0.0023 18.8 4.8 23 82-104 10-32 (136)
272 3t4e_A Quinate/shikimate dehyd 35.9 93 0.0032 22.5 5.8 45 68-113 135-181 (312)
273 3e05_A Precorrin-6Y C5,15-meth 35.6 79 0.0027 20.4 5.1 39 66-104 122-160 (204)
274 3ju3_A Probable 2-oxoacid ferr 35.4 54 0.0018 19.9 3.9 28 78-105 12-41 (118)
275 3q58_A N-acetylmannosamine-6-p 35.2 1E+02 0.0035 21.0 5.8 28 81-108 181-208 (229)
276 4hb9_A Similarities with proba 34.9 41 0.0014 24.2 3.8 28 83-111 4-31 (412)
277 3c85_A Putative glutathione-re 34.7 39 0.0013 21.7 3.4 30 83-113 42-72 (183)
278 2ooq_A Receptor-type tyrosine- 34.5 58 0.002 23.1 4.5 18 78-95 211-229 (286)
279 2hma_A Probable tRNA (5-methyl 34.5 36 0.0012 25.3 3.5 27 79-105 9-35 (376)
280 2pln_A HP1043, response regula 34.4 72 0.0024 18.7 4.6 31 80-111 19-49 (137)
281 2hmt_A YUAA protein; RCK, KTN, 34.4 48 0.0017 19.8 3.7 31 81-113 8-38 (144)
282 1z63_A Helicase of the SNF2/RA 34.3 52 0.0018 24.8 4.5 38 76-114 338-376 (500)
283 1p6q_A CHEY2; chemotaxis, sign 34.2 69 0.0024 18.5 4.5 13 98-111 46-58 (129)
284 1fpr_A Protein-tyrosine phosph 34.2 54 0.0018 23.1 4.3 20 77-96 202-222 (284)
285 3l9w_A Glutathione-regulated p 34.0 42 0.0014 25.2 3.8 44 83-127 7-53 (413)
286 3t6k_A Response regulator rece 33.9 75 0.0026 18.8 4.7 14 97-111 42-55 (136)
287 3oiy_A Reverse gyrase helicase 33.5 43 0.0015 24.5 3.8 34 79-113 252-286 (414)
288 1bd3_D Uprtase, uracil phospho 33.5 37 0.0013 23.8 3.2 31 79-109 156-191 (243)
289 3dwg_A Cysteine synthase B; su 33.0 74 0.0025 22.8 4.9 64 50-113 39-106 (325)
290 2v03_A Cysteine synthase B; py 32.7 60 0.0021 23.0 4.4 33 81-113 62-94 (303)
291 3tnl_A Shikimate dehydrogenase 32.6 1.1E+02 0.0039 22.0 5.8 44 68-112 141-186 (315)
292 3a2k_A TRNA(Ile)-lysidine synt 32.5 93 0.0032 23.7 5.6 39 67-105 4-48 (464)
293 3s3e_A Tyrosine-protein phosph 32.5 65 0.0022 23.1 4.5 20 77-96 233-253 (307)
294 1yfo_A D1, receptor protein ty 32.5 64 0.0022 23.0 4.5 19 78-96 224-243 (302)
295 3lap_A Arginine repressor; arg 32.5 38 0.0013 22.4 3.0 27 76-102 143-169 (170)
296 3jyo_A Quinate/shikimate dehyd 32.4 1.3E+02 0.0044 21.3 6.0 35 78-113 126-160 (283)
297 3i42_A Response regulator rece 32.3 65 0.0022 18.6 4.0 17 94-111 38-54 (127)
298 1ni5_A Putative cell cycle pro 32.2 71 0.0024 24.1 4.8 34 72-105 6-44 (433)
299 4grz_A Tyrosine-protein phosph 32.1 68 0.0023 22.6 4.5 20 76-95 203-223 (288)
300 3rjz_A N-type ATP pyrophosphat 32.0 51 0.0017 22.9 3.7 27 81-108 6-32 (237)
301 3lvj_C Sulfurtransferase TUSA; 32.0 71 0.0024 18.0 5.7 38 67-105 26-63 (82)
302 3ozf_A Hypoxanthine-guanine-xa 31.8 44 0.0015 23.5 3.4 31 78-108 155-188 (250)
303 3sqn_A Conserved domain protei 31.8 53 0.0018 25.3 4.1 28 77-104 396-425 (485)
304 3gh1_A Predicted nucleotide-bi 31.8 61 0.0021 25.0 4.3 29 77-105 144-179 (462)
305 3fbt_A Chorismate mutase and s 31.8 1.3E+02 0.0043 21.4 5.9 45 68-113 109-155 (282)
306 1wch_A Protein tyrosine phosph 31.7 64 0.0022 23.3 4.4 19 77-95 237-256 (315)
307 3dje_A Fructosyl amine: oxygen 31.6 50 0.0017 24.3 3.9 32 80-112 7-38 (438)
308 2ojl_A Hypothetical protein; B 31.4 36 0.0012 20.8 2.5 19 80-98 10-28 (108)
309 2i75_A Tyrosine-protein phosph 31.4 68 0.0023 23.2 4.5 20 77-96 235-255 (320)
310 3e8x_A Putative NAD-dependent 31.1 55 0.0019 21.7 3.8 33 78-111 20-52 (236)
311 3dex_A SAV_2001; alpha-beta pr 31.1 37 0.0013 20.7 2.5 18 82-99 16-33 (107)
312 1p15_A Protein-tyrosine phosph 31.0 71 0.0024 22.0 4.4 19 77-95 174-193 (253)
313 1lh0_A OMP synthase; loop clos 30.9 64 0.0022 21.7 4.0 29 78-107 117-148 (213)
314 1yzh_A TRNA (guanine-N(7)-)-me 30.8 1.1E+02 0.0038 19.9 5.4 43 66-108 136-178 (214)
315 1p9o_A Phosphopantothenoylcyst 30.7 39 0.0013 24.6 3.0 23 89-112 65-87 (313)
316 1v8z_A Tryptophan synthase bet 30.5 81 0.0028 23.1 4.9 63 50-112 68-131 (388)
317 2pfu_A Biopolymer transport EX 30.5 79 0.0027 18.0 5.3 45 67-111 43-92 (99)
318 3fho_A ATP-dependent RNA helic 30.4 24 0.00081 27.1 2.0 37 78-115 356-392 (508)
319 3fmp_B ATP-dependent RNA helic 30.4 11 0.00037 28.5 0.0 37 78-115 332-368 (479)
320 2i1y_A Receptor-type tyrosine- 30.4 71 0.0024 22.8 4.4 19 78-96 223-242 (301)
321 3q87_B N6 adenine specific DNA 30.3 96 0.0033 19.5 4.7 42 67-109 105-146 (170)
322 2v6i_A RNA helicase; membrane, 30.3 55 0.0019 24.5 4.0 35 79-114 171-205 (431)
323 3b7o_A Tyrosine-protein phosph 30.3 80 0.0027 22.7 4.7 20 77-96 237-257 (316)
324 1qkk_A DCTD, C4-dicarboxylate 30.2 83 0.0029 19.0 4.3 35 81-116 5-39 (155)
325 1o57_A PUR operon repressor; p 30.2 38 0.0013 24.3 2.9 32 77-108 194-228 (291)
326 3k32_A Uncharacterized protein 30.1 46 0.0016 22.2 3.2 25 81-105 8-32 (203)
327 1mvo_A PHOP response regulator 30.1 85 0.0029 18.3 4.5 13 98-111 42-54 (136)
328 3o8q_A Shikimate 5-dehydrogena 29.8 1.2E+02 0.0042 21.4 5.5 35 78-113 125-159 (281)
329 3sr3_A Microcin immunity prote 29.8 70 0.0024 23.3 4.3 30 76-105 10-46 (336)
330 3c96_A Flavin-containing monoo 29.7 54 0.0019 24.0 3.8 29 83-111 7-35 (410)
331 1ve1_A O-acetylserine sulfhydr 29.7 73 0.0025 22.5 4.4 64 50-113 26-95 (304)
332 3mjd_A Orotate phosphoribosylt 29.6 61 0.0021 22.4 3.8 29 78-106 135-166 (232)
333 2r25_B Osmosensing histidine p 29.6 89 0.003 18.3 4.5 29 82-111 29-59 (133)
334 3ecs_A Translation initiation 29.5 1E+02 0.0035 22.4 5.1 14 92-105 161-174 (315)
335 3gx8_A Monothiol glutaredoxin- 29.1 90 0.0031 18.8 4.2 38 67-105 4-47 (121)
336 3m4u_A Tyrosine specific prote 29.0 71 0.0024 22.8 4.2 19 77-95 220-239 (306)
337 3qek_A NMDA glutamate receptor 28.7 77 0.0026 22.8 4.4 47 67-113 203-252 (384)
338 2z83_A Helicase/nucleoside tri 28.7 62 0.0021 24.4 4.0 33 79-112 190-222 (459)
339 4ea9_A Perosamine N-acetyltran 28.6 76 0.0026 21.1 4.2 47 78-125 11-57 (220)
340 2qxy_A Response regulator; reg 28.6 80 0.0027 18.6 4.0 14 97-111 42-55 (142)
341 2g3w_A YAEQ protein, hypotheti 28.5 81 0.0028 21.1 4.1 36 77-113 97-137 (182)
342 4gud_A Imidazole glycerol phos 28.4 87 0.003 20.6 4.4 26 80-105 3-28 (211)
343 4ao9_A Beta-phenylalanine amin 28.1 90 0.0031 23.8 4.8 53 67-120 131-185 (454)
344 3cgv_A Geranylgeranyl reductas 28.1 67 0.0023 23.0 4.0 29 83-112 7-35 (397)
345 2gjt_A Receptor-type tyrosine- 28.0 63 0.0021 23.0 3.7 19 77-95 214-233 (295)
346 2p6x_A Tyrosine-protein phosph 28.0 85 0.0029 22.5 4.5 20 77-96 218-238 (309)
347 1fuu_A Yeast initiation factor 27.7 13 0.00044 26.9 0.0 37 78-115 258-294 (394)
348 1pdo_A Mannose permease; phosp 27.6 1.1E+02 0.0038 18.8 5.2 44 67-112 43-91 (135)
349 1o58_A O-acetylserine sulfhydr 27.6 1E+02 0.0034 21.8 4.8 64 50-113 33-98 (303)
350 2c5s_A THII, probable thiamine 27.6 57 0.002 24.5 3.6 27 79-105 187-213 (413)
351 1yvv_A Amine oxidase, flavin-c 27.5 72 0.0024 22.3 4.0 29 82-112 5-33 (336)
352 2ivy_A Hypothetical protein SS 27.4 66 0.0022 19.1 3.2 16 90-105 15-30 (101)
353 3mb5_A SAM-dependent methyltra 27.3 44 0.0015 22.5 2.8 46 67-112 175-222 (255)
354 1mb3_A Cell division response 27.3 91 0.0031 17.7 4.5 14 97-111 39-52 (124)
355 2dpl_A GMP synthetase, GMP syn 27.3 93 0.0032 22.3 4.6 36 69-105 11-47 (308)
356 1iuk_A Hypothetical protein TT 27.2 77 0.0026 19.7 3.7 33 79-112 13-48 (140)
357 1tk9_A Phosphoheptose isomeras 27.2 1.2E+02 0.0042 19.2 5.4 40 72-112 104-145 (188)
358 3hv2_A Response regulator/HD d 27.1 81 0.0028 19.0 3.8 14 97-111 52-65 (153)
359 2q3b_A Cysteine synthase A; py 27.0 86 0.0029 22.2 4.4 64 50-113 33-100 (313)
360 4f11_A Gamma-aminobutyric acid 26.8 66 0.0023 23.5 3.8 44 70-113 197-243 (433)
361 1ryi_A Glycine oxidase; flavop 26.6 74 0.0025 22.7 4.0 30 81-112 19-48 (382)
362 3trj_A Phosphoheptose isomeras 26.5 1.3E+02 0.0043 19.9 4.9 43 69-112 105-149 (201)
363 1u7z_A Coenzyme A biosynthesis 26.5 97 0.0033 21.3 4.4 24 88-112 33-56 (226)
364 3don_A Shikimate dehydrogenase 26.5 87 0.003 22.1 4.2 33 78-111 116-148 (277)
365 3n5m_A Adenosylmethionine-8-am 26.5 80 0.0028 23.3 4.3 49 67-116 95-151 (452)
366 2oc3_A Tyrosine-protein phosph 26.5 96 0.0033 22.1 4.5 18 78-95 225-243 (303)
367 2kyr_A Fructose-like phosphotr 26.4 98 0.0033 18.9 3.9 26 83-109 11-41 (111)
368 2oln_A NIKD protein; flavoprot 26.4 69 0.0024 23.1 3.8 29 83-112 7-35 (397)
369 3pwz_A Shikimate dehydrogenase 26.4 1.6E+02 0.0056 20.6 5.7 34 79-113 120-153 (272)
370 1qop_B Tryptophan synthase bet 26.3 87 0.003 23.1 4.4 63 50-112 72-135 (396)
371 1je3_A EC005, hypothetical 8.6 26.3 77 0.0026 18.7 3.4 41 67-109 43-83 (97)
372 1o54_A SAM-dependent O-methylt 26.3 44 0.0015 23.1 2.6 46 67-112 194-239 (277)
373 1z3i_X Similar to RAD54-like; 26.3 65 0.0022 25.6 3.9 36 78-114 415-450 (644)
374 3hmu_A Aminotransferase, class 26.2 82 0.0028 23.8 4.3 50 67-116 103-160 (472)
375 3heb_A Response regulator rece 26.0 1.1E+02 0.0038 18.3 4.4 9 96-104 21-29 (152)
376 2qr3_A Two-component system re 26.0 87 0.003 18.3 3.8 16 95-111 39-54 (140)
377 4ffl_A PYLC; amino acid, biosy 26.0 75 0.0026 22.8 3.9 29 81-111 3-31 (363)
378 3rp8_A Flavoprotein monooxygen 26.0 65 0.0022 23.4 3.7 30 81-112 25-54 (407)
379 3ka7_A Oxidoreductase; structu 25.9 69 0.0023 23.3 3.8 28 84-112 4-31 (425)
380 2pqm_A Cysteine synthase; OASS 25.8 72 0.0024 23.1 3.8 63 50-113 44-111 (343)
381 4dad_A Putative pilus assembly 25.8 81 0.0028 18.8 3.6 23 81-103 22-44 (146)
382 2h4v_A Receptor-type tyrosine- 25.8 98 0.0034 22.3 4.5 19 77-95 244-263 (320)
383 2xbl_A Phosphoheptose isomeras 25.7 1.4E+02 0.0047 19.2 5.0 35 76-111 114-150 (198)
384 2jlq_A Serine protease subunit 25.7 65 0.0022 24.2 3.6 36 79-115 188-223 (451)
385 3igs_A N-acetylmannosamine-6-p 25.6 1.5E+02 0.0053 20.2 5.3 28 81-108 181-208 (232)
386 3dme_A Conserved exported prot 25.6 81 0.0028 22.2 4.0 31 81-113 6-36 (369)
387 8abp_A L-arabinose-binding pro 25.6 68 0.0023 22.0 3.6 29 82-110 199-229 (306)
388 2oka_A Hypothetical protein; P 25.5 53 0.0018 19.8 2.5 19 80-98 7-25 (104)
389 3bl5_A Queuosine biosynthesis 25.4 75 0.0026 20.9 3.6 7 99-105 52-58 (219)
390 1vl2_A Argininosuccinate synth 25.2 77 0.0026 24.1 3.9 24 82-105 17-40 (421)
391 4gl2_A Interferon-induced heli 25.0 57 0.0019 25.8 3.3 34 79-113 400-439 (699)
392 2pl1_A Transcriptional regulat 25.0 1E+02 0.0034 17.4 4.2 15 96-111 37-51 (121)
393 1sby_A Alcohol dehydrogenase; 24.9 91 0.0031 21.0 4.0 30 80-109 6-35 (254)
394 2p0g_A Selenoprotein W-related 24.9 56 0.0019 19.8 2.5 18 81-98 6-23 (105)
395 3f41_A Phytase; tandem repeat, 24.9 64 0.0022 26.0 3.5 25 67-92 221-246 (629)
396 3dfz_A SIRC, precorrin-2 dehyd 24.8 89 0.003 21.4 3.9 41 78-120 30-74 (223)
397 1y56_B Sarcosine oxidase; dehy 24.8 84 0.0029 22.5 4.0 30 81-112 7-36 (382)
398 3tbh_A O-acetyl serine sulfhyd 24.8 88 0.003 22.6 4.1 63 50-112 37-104 (334)
399 2wv9_A Flavivirin protease NS2 24.8 66 0.0022 25.9 3.6 35 78-113 409-443 (673)
400 2i2w_A Phosphoheptose isomeras 24.8 1.4E+02 0.0049 19.6 5.0 42 70-112 123-166 (212)
401 3i36_A Vascular protein tyrosi 24.8 1E+02 0.0034 22.5 4.4 19 77-95 235-254 (342)
402 2m1z_A LMO0427 protein; homolo 24.8 82 0.0028 19.0 3.3 26 83-109 8-38 (106)
403 1b4a_A Arginine repressor; hel 24.7 53 0.0018 21.1 2.6 26 76-101 122-147 (149)
404 2whx_A Serine protease/ntpase/ 24.6 76 0.0026 25.2 4.0 35 78-113 354-388 (618)
405 4gnr_A ABC transporter substra 24.5 75 0.0026 22.4 3.7 40 67-106 184-223 (353)
406 1jln_A STEP-like ptpase, prote 24.5 1.1E+02 0.0036 21.8 4.4 19 77-95 220-239 (297)
407 3qja_A IGPS, indole-3-glycerol 24.5 1.8E+02 0.0061 20.5 5.5 89 16-108 147-240 (272)
408 2hc1_A Receptor-type tyrosine- 24.4 1.1E+02 0.0039 21.5 4.6 19 77-95 216-235 (291)
409 4az1_A Tyrosine specific prote 24.3 1E+02 0.0034 22.0 4.3 19 78-96 218-237 (302)
410 3hzh_A Chemotaxis response reg 24.2 1.2E+02 0.0041 18.3 4.3 24 82-105 39-62 (157)
411 1y80_A Predicted cobalamin bin 24.1 1.1E+02 0.0039 20.2 4.4 32 79-111 88-123 (210)
412 3v4g_A Arginine repressor; vib 23.9 62 0.0021 21.6 2.9 26 76-101 149-174 (180)
413 4id9_A Short-chain dehydrogena 23.9 82 0.0028 22.2 3.8 33 78-111 18-50 (347)
414 1i4n_A Indole-3-glycerol phosp 23.8 1.2E+02 0.004 21.2 4.4 85 16-105 135-225 (251)
415 3qw4_B UMP synthase; N-termina 23.8 1.5E+02 0.0051 22.7 5.3 50 76-125 362-420 (453)
416 3a10_A Response regulator; pho 23.8 1E+02 0.0036 17.2 4.3 15 96-111 38-52 (116)
417 2ywl_A Thioredoxin reductase r 23.8 1E+02 0.0035 19.3 4.0 28 84-112 5-32 (180)
418 3crn_A Response regulator rece 23.7 1.2E+02 0.004 17.7 4.2 24 84-111 31-54 (132)
419 3vot_A L-amino acid ligase, BL 23.6 50 0.0017 24.4 2.6 33 77-111 3-35 (425)
420 3i5t_A Aminotransferase; pyrid 23.6 1.5E+02 0.0053 22.2 5.4 51 67-117 101-159 (476)
421 1z7w_A Cysteine synthase; tran 23.4 1.1E+02 0.0037 21.9 4.3 64 50-113 32-100 (322)
422 3tla_A MCCF; serine protease, 23.4 1.1E+02 0.0036 22.8 4.3 30 76-105 40-76 (371)
423 2ayx_A Sensor kinase protein R 23.3 1.3E+02 0.0044 20.3 4.6 37 81-118 131-167 (254)
424 1y7l_A O-acetylserine sulfhydr 23.2 70 0.0024 22.7 3.3 33 81-113 63-95 (316)
425 1xtt_A Probable uracil phospho 22.9 79 0.0027 21.6 3.3 28 81-109 135-166 (216)
426 2egu_A Cysteine synthase; O-ac 22.9 96 0.0033 21.9 3.9 64 50-113 31-98 (308)
427 3zyw_A Glutaredoxin-3; metal b 22.9 1.3E+02 0.0043 17.8 4.3 37 68-105 5-47 (111)
428 1zc0_A Tyrosine-protein phosph 22.9 1.2E+02 0.0043 21.7 4.5 19 77-95 231-250 (309)
429 3fg2_P Putative rubredoxin red 22.8 1.2E+02 0.004 22.2 4.5 32 80-112 2-34 (404)
430 2x3n_A Probable FAD-dependent 22.7 96 0.0033 22.4 4.0 29 83-112 9-37 (399)
431 3hz7_A Uncharacterized protein 22.7 1.2E+02 0.004 17.4 4.5 40 68-109 18-58 (87)
432 2i2x_B MTAC, methyltransferase 22.7 1.2E+02 0.0041 21.0 4.4 31 79-110 123-157 (258)
433 2gf3_A MSOX, monomeric sarcosi 22.6 1E+02 0.0035 21.9 4.1 29 82-112 6-34 (389)
434 1cyd_A Carbonyl reductase; sho 22.5 1.1E+02 0.0037 20.3 4.0 31 80-111 8-38 (244)
435 3sm9_A Mglur3, metabotropic gl 22.5 2E+02 0.0067 21.7 5.8 49 66-114 229-278 (479)
436 2d59_A Hypothetical protein PH 22.5 1.1E+02 0.0036 19.1 3.7 33 79-112 22-57 (144)
437 2wci_A Glutaredoxin-4; redox-a 22.5 84 0.0029 19.6 3.2 38 67-105 23-66 (135)
438 1kdg_A CDH, cellobiose dehydro 22.4 98 0.0033 23.8 4.1 30 83-113 10-39 (546)
439 2pk3_A GDP-6-deoxy-D-LYXO-4-he 22.3 88 0.003 21.7 3.6 33 77-110 10-42 (321)
440 4dfc_B Uvrabc system protein A 22.3 66 0.0023 20.0 2.6 44 66-112 9-57 (126)
441 3nix_A Flavoprotein/dehydrogen 22.3 86 0.003 22.7 3.7 30 81-112 7-36 (421)
442 1k0i_A P-hydroxybenzoate hydro 22.1 83 0.0029 22.6 3.6 29 83-112 5-33 (394)
443 3cfy_A Putative LUXO repressor 22.1 96 0.0033 18.3 3.4 41 67-111 15-55 (137)
444 3p1w_A Rabgdi protein; GDI RAB 22.1 98 0.0033 23.8 4.0 28 83-111 23-50 (475)
445 2qsj_A DNA-binding response re 22.0 1.1E+02 0.0036 18.4 3.7 6 106-111 52-57 (154)
446 3nrn_A Uncharacterized protein 22.0 94 0.0032 22.7 3.9 29 82-112 3-31 (421)
447 3kto_A Response regulator rece 22.0 74 0.0025 18.7 2.8 23 82-104 9-31 (136)
448 3vyw_A MNMC2; tRNA wobble urid 21.8 57 0.0019 23.7 2.5 42 66-112 206-247 (308)
449 4a6r_A Omega transaminase; tra 21.8 1.5E+02 0.0052 21.9 5.0 50 67-116 98-155 (459)
450 3f41_A Phytase; tandem repeat, 21.7 62 0.0021 26.1 2.9 26 67-93 519-545 (629)
451 1srr_A SPO0F, sporulation resp 21.7 1.2E+02 0.0042 17.2 4.2 25 83-111 30-54 (124)
452 1x92_A APC5045, phosphoheptose 21.6 1.7E+02 0.0058 18.8 5.0 36 76-112 111-148 (199)
453 1c0p_A D-amino acid oxidase; a 21.5 92 0.0031 22.2 3.7 31 80-112 7-37 (363)
454 1wyz_A Putative S-adenosylmeth 21.5 2E+02 0.0068 19.6 6.1 56 67-123 71-134 (242)
455 2fa8_A Hypothetical protein AT 21.5 71 0.0024 19.3 2.5 18 80-97 9-26 (105)
456 1hdo_A Biliverdin IX beta redu 21.5 1.1E+02 0.0037 19.4 3.8 31 80-111 4-34 (206)
457 2qzj_A Two-component response 21.3 1.3E+02 0.0046 17.6 4.2 25 83-111 31-55 (136)
458 3eaf_A ABC transporter, substr 21.3 1.4E+02 0.0047 21.4 4.6 43 67-110 185-229 (391)
459 2pwy_A TRNA (adenine-N(1)-)-me 21.2 43 0.0015 22.5 1.8 46 67-112 179-224 (258)
460 3fio_A A cystathionine beta-sy 21.1 97 0.0033 15.8 3.9 25 87-111 6-30 (70)
461 3vps_A TUNA, NAD-dependent epi 21.0 1.2E+02 0.0042 20.8 4.2 32 79-111 7-38 (321)
462 2z1m_A GDP-D-mannose dehydrata 21.0 1.1E+02 0.0038 21.3 4.0 31 80-111 4-34 (345)
463 3cg0_A Response regulator rece 21.0 1.3E+02 0.0045 17.4 3.9 8 97-104 27-34 (140)
464 3m6m_D Sensory/regulatory prot 20.9 1.1E+02 0.0038 18.2 3.5 15 96-111 51-65 (143)
465 3fiu_A NH(3)-dependent NAD(+) 20.8 2.1E+02 0.0073 19.7 5.4 30 78-107 28-57 (249)
466 2uzz_A N-methyl-L-tryptophan o 20.7 1.1E+02 0.0037 21.7 3.9 29 82-112 5-33 (372)
467 2yva_A DNAA initiator-associat 20.6 1.8E+02 0.006 18.7 5.6 42 70-112 101-144 (196)
468 3ruf_A WBGU; rossmann fold, UD 20.6 1.1E+02 0.0038 21.5 3.9 33 78-111 24-56 (351)
469 1ccw_A Protein (glutamate muta 20.6 1.6E+02 0.0054 18.1 4.2 18 96-113 75-92 (137)
470 1zud_1 Adenylyltransferase THI 20.6 1.3E+02 0.0046 20.6 4.2 37 79-116 28-64 (251)
471 2we8_A Xanthine dehydrogenase; 20.6 1.2E+02 0.0042 22.6 4.2 31 81-112 205-235 (386)
472 2cjz_A Human protein tyrosine 20.5 1.6E+02 0.0054 21.0 4.7 19 77-95 229-248 (305)
473 3dod_A Adenosylmethionine-8-am 20.5 1.7E+02 0.0059 21.5 5.1 54 67-120 91-152 (448)
474 1l3i_A Precorrin-6Y methyltran 20.4 93 0.0032 19.4 3.2 39 66-104 114-152 (192)
475 2xij_A Methylmalonyl-COA mutas 20.4 1.1E+02 0.0038 25.2 4.2 48 63-113 642-693 (762)
476 3alj_A 2-methyl-3-hydroxypyrid 20.3 1.1E+02 0.0037 22.0 3.8 30 81-112 13-42 (379)
477 1w85_B Pyruvate dehydrogenase 20.3 1.3E+02 0.0045 21.5 4.3 29 77-105 199-229 (324)
478 3awd_A GOX2181, putative polyo 20.3 1.2E+02 0.0041 20.3 3.9 10 79-88 37-46 (260)
479 3lua_A Response regulator rece 20.3 1.4E+02 0.0048 17.4 4.5 23 82-104 7-30 (140)
480 2vou_A 2,6-dihydroxypyridine h 20.3 1.1E+02 0.0037 22.2 3.8 29 81-111 7-35 (397)
481 1m3s_A Hypothetical protein YC 20.3 1.6E+02 0.0056 18.6 4.4 35 76-111 77-113 (186)
482 2eyq_A TRCF, transcription-rep 20.3 1.4E+02 0.0049 25.7 5.0 47 68-115 801-849 (1151)
483 1xhf_A DYE resistance, aerobic 20.2 1.3E+02 0.0045 17.0 4.3 14 97-111 41-54 (123)
484 2fca_A TRNA (guanine-N(7)-)-me 20.1 1.9E+02 0.0066 18.9 5.0 44 65-108 132-175 (213)
485 3ghd_A A cystathionine beta-sy 20.0 1.2E+02 0.004 16.3 3.9 31 83-113 2-32 (70)
No 1
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.96 E-value=2.6e-29 Score=164.80 Aligned_cols=116 Identities=48% Similarity=0.763 Sum_probs=101.5
Q ss_pred CCCceeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeC
Q 032621 8 SGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQ 87 (137)
Q Consensus 8 ~~~~~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~ 87 (137)
.......|+++++.++++.+.+|||||++.||..|||||| +|||+..+...+.+...++...+...++++++||+||.
T Consensus 13 ~~~~~~~is~~e~~~~l~~~~~lIDvR~~~e~~~ghIpgA--inip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyC~ 90 (129)
T 1tq1_A 13 ESRVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGA--INVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQ 90 (129)
T ss_dssp CSCCCEEEEHHHHHHHHHHTCCEEEESCHHHHHHCCBTTB--EECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEES
T ss_pred hcCCCcccCHHHHHHHhcCCCEEEECCCHHHHhcCCCCCc--EECcHhhcccccccCCHHHHHHHHhhCCCCCeEEEECC
Confidence 4456789999999999987789999999999999999999 99999665544555555777766655788999999999
Q ss_pred CCchHHHHHHHHHHCCccceeeccccHHHHHhCCCcee
Q 032621 88 SGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVK 125 (137)
Q Consensus 88 ~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~ 125 (137)
+|.||..+++.|.+.||++|++|+||+.+|...++|++
T Consensus 91 ~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 128 (129)
T 1tq1_A 91 SGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK 128 (129)
T ss_dssp SCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred CCcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999875
No 2
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.96 E-value=1.3e-29 Score=160.47 Aligned_cols=99 Identities=28% Similarity=0.400 Sum_probs=87.2
Q ss_pred eeeCHHHHHHHhhCC--CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCc
Q 032621 13 ITVDVRAAKNLLESG--YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 90 (137)
Q Consensus 13 ~~is~~~~~~~~~~~--~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ 90 (137)
+.||++|+.+.+.++ ++|||||++.||..|||||| +|||+. ++...+.+ ++++++||+||.+|.
T Consensus 2 k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~ivv~C~~G~ 67 (103)
T 3iwh_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNA--KLIPMD-----------TIPDNLNS-FNKNEIYYIVCAGGV 67 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTC--EECCGG-----------GGGGCGGG-CCTTSEEEEECSSSS
T ss_pred CCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCc--ccCccc-----------chhhhhhh-hcCCCeEEEECCCCH
Confidence 589999999988664 89999999999999999999 999996 44444444 488999999999999
Q ss_pred hHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 032621 91 RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 126 (137)
Q Consensus 91 ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~ 126 (137)
||..++..|.+.||++ +.|.||+.+|.++|+|+++
T Consensus 68 rS~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 68 RSAKVVEYLEANGIDA-VNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp HHHHHHHHHHTTTCEE-EEETTHHHHHCSSSCBCCC
T ss_pred HHHHHHHHHHHcCCCE-EEecChHHHHHHCCCccee
Confidence 9999999999999975 4799999999999999875
No 3
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.96 E-value=1.4e-28 Score=156.75 Aligned_cols=102 Identities=25% Similarity=0.435 Sum_probs=92.2
Q ss_pred eeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCch
Q 032621 12 VITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGAR 91 (137)
Q Consensus 12 ~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~r 91 (137)
++.|+++++.+++++ .+|||||++.||..|||||| +|+|+. ++...+..+ +++++||+||.+|.|
T Consensus 3 ~~~is~~el~~~l~~-~~iiDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~l-~~~~~ivvyC~~G~r 67 (108)
T 3gk5_A 3 YRSINAADLYENIKA-YTVLDVREPFELIFGSIANS--INIPIS-----------ELREKWKIL-ERDKKYAVICAHGNR 67 (108)
T ss_dssp CCEECHHHHHHTTTT-CEEEECSCHHHHTTCBCTTC--EECCHH-----------HHHHHGGGS-CTTSCEEEECSSSHH
T ss_pred ccEeCHHHHHHHHcC-CEEEECCCHHHHhcCcCCCC--EEcCHH-----------HHHHHHHhC-CCCCeEEEEcCCCcH
Confidence 568999999999988 99999999999999999999 999995 666666554 889999999999999
Q ss_pred HHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621 92 SLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 129 (137)
Q Consensus 92 a~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~ 129 (137)
|..+++.|++.|| +|++|+||+.+|.+.+.|+++...
T Consensus 68 s~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~~~~ 104 (108)
T 3gk5_A 68 SAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVLEHH 104 (108)
T ss_dssp HHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBCC--
T ss_pred HHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCCCCC
Confidence 9999999999999 899999999999999999987654
No 4
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.95 E-value=2.6e-28 Score=155.38 Aligned_cols=104 Identities=23% Similarity=0.355 Sum_probs=93.3
Q ss_pred CceeeeCHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCC
Q 032621 10 AEVITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS 88 (137)
Q Consensus 10 ~~~~~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~ 88 (137)
..++.|+++++.++++++ .+|||||++.||..|||||| +|||+. ++...+.+ ++++++||+||.+
T Consensus 2 ~~~~~i~~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~ivvyc~~ 67 (108)
T 1gmx_A 2 DQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQA--FHLTND-----------TLGAFMRD-NDFDTPVMVMCYH 67 (108)
T ss_dssp CSCEEECHHHHHHHHHTTCCEEEECSCHHHHHHCEETTC--EECCHH-----------HHHHHHHH-SCTTSCEEEECSS
T ss_pred CcccccCHHHHHHHHhCCCCEEEEcCCHHHHHhCCCccC--EeCCHH-----------HHHHHHHh-cCCCCCEEEEcCC
Confidence 356799999999998764 89999999999999999999 999995 66666665 4889999999999
Q ss_pred CchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621 89 GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 89 g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
|.||..+++.|++.||++|++|+||+.+|.+. +|++++.
T Consensus 68 g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~~~~ 106 (108)
T 1gmx_A 68 GNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEVAY 106 (108)
T ss_dssp SSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGEEC
T ss_pred CchHHHHHHHHHHcCCceEEEecCCHHHHHHh-CCccccc
Confidence 99999999999999999999999999999998 9987643
No 5
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.95 E-value=1.3e-28 Score=154.83 Aligned_cols=97 Identities=23% Similarity=0.334 Sum_probs=85.8
Q ss_pred eeeCHHHHHHHhhC--CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCc
Q 032621 13 ITVDVRAAKNLLES--GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 90 (137)
Q Consensus 13 ~~is~~~~~~~~~~--~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ 90 (137)
+.|+++++.+++++ +.+|||||++.||..|||||| +|+|+. ++.+.+.. ++++++||+||.+|.
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~ivvyC~~g~ 67 (100)
T 3foj_A 2 ESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGA--ETIPMN-----------SIPDNLNY-FNDNETYYIICKAGG 67 (100)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTC--EECCGG-----------GGGGCGGG-SCTTSEEEEECSSSH
T ss_pred CccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCC--EECCHH-----------HHHHHHHh-CCCCCcEEEEcCCCc
Confidence 57999999999853 489999999999999999999 999996 33333433 478899999999999
Q ss_pred hHHHHHHHHHHCCccceeeccccHHHHHhCCCce
Q 032621 91 RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV 124 (137)
Q Consensus 91 ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~ 124 (137)
||..+++.|++.|| +|++|+||+.+|.+.|+|+
T Consensus 68 rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 68 RSAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp HHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred hHHHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence 99999999999999 8999999999999999885
No 6
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.95 E-value=1.5e-28 Score=155.31 Aligned_cols=99 Identities=28% Similarity=0.396 Sum_probs=87.7
Q ss_pred eeeCHHHHHHHhhC--CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCc
Q 032621 13 ITVDVRAAKNLLES--GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 90 (137)
Q Consensus 13 ~~is~~~~~~~~~~--~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ 90 (137)
+.|+++++.+++.+ +.+|||||++.||..|||||| +|+|+. ++...+.. ++++++||+||.+|.
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~iv~yC~~g~ 67 (103)
T 3eme_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNA--KLIPMD-----------TIPDNLNS-FNKNEIYYIVCAGGV 67 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTC--EECCGG-----------GGGGCGGG-CCTTSEEEEECSSSS
T ss_pred CccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCC--EEcCHH-----------HHHHHHHh-CCCCCeEEEECCCCh
Confidence 57999999998843 489999999999999999999 999996 33344444 478999999999999
Q ss_pred hHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 032621 91 RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 126 (137)
Q Consensus 91 ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~ 126 (137)
||..+++.|...|| +|++|+||+.+|.+.|+|+++
T Consensus 68 rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 68 RSAKVVEYLEANGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp HHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred HHHHHHHHHHHCCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 99999999999999 899999999999999999875
No 7
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.8e-28 Score=160.43 Aligned_cols=116 Identities=21% Similarity=0.318 Sum_probs=96.4
Q ss_pred CCceeeeCHHHHHHHhhC---CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEE
Q 032621 9 GAEVITVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVV 84 (137)
Q Consensus 9 ~~~~~~is~~~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~ 84 (137)
......|+++++.+++++ +.+|||||++.||..|||||| +|+|+..+.........+|.+.+... ++++++||+
T Consensus 19 ~~~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgA--inip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ivv 96 (139)
T 3d1p_A 19 VSNIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPAS--INVPYRSHPDAFALDPLEFEKQIGIPKPDSAKELIF 96 (139)
T ss_dssp -CCCEECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTC--EECCTTTCTTGGGSCHHHHHHHHSSCCCCTTSEEEE
T ss_pred CCCcceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCc--EEcCHHHhhhhccCCHHHHHHHHhccCCCCCCeEEE
Confidence 456789999999999963 489999999999999999999 99999765322222233455555433 578899999
Q ss_pred EeCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 032621 85 GCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 126 (137)
Q Consensus 85 ~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~ 126 (137)
||.+|.||..+++.|.+.||++|++|+||+.+|.+.|+|+.+
T Consensus 97 yC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 97 YCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp ECSSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred ECCCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 999999999999999999999999999999999999999764
No 8
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.95 E-value=8.6e-28 Score=152.63 Aligned_cols=98 Identities=28% Similarity=0.437 Sum_probs=81.7
Q ss_pred HHHHHhhC---CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchHHHH
Q 032621 19 AAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHA 95 (137)
Q Consensus 19 ~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~ 95 (137)
++.++++. +++|||||++.||..|||||| +|||+. ++...+...++++++||+||.+|.||..+
T Consensus 2 el~~~l~~~~~~~~liDvR~~~e~~~ghIpgA--i~ip~~-----------~l~~~~~~~l~~~~~ivvyc~~g~rs~~a 68 (106)
T 3hix_A 2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIMGA--MAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDEQTSQA 68 (106)
T ss_dssp -----------CCEEEECSCHHHHHTCEETTC--EECCGG-----------GHHHHHHHHSCTTSCEEEECSSHHHHHHH
T ss_pred hHHHHHHcCCCCeEEEECCCHHHHhcCcCCCC--EeCCHH-----------HHHHHHHhcCCCCCeEEEEECCCChHHHH
Confidence 45666653 489999999999999999999 999995 56666655568899999999999999999
Q ss_pred HHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621 96 TADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 129 (137)
Q Consensus 96 ~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~ 129 (137)
++.|...||++|++|+||+.+|.++++|+.+...
T Consensus 69 ~~~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~~~ 102 (106)
T 3hix_A 69 VNLLRSAGFEHVSELKGGLAAWKAIGGPTELEHH 102 (106)
T ss_dssp HHHHHHTTCSCEEECTTHHHHHHHTTCCEEECCE
T ss_pred HHHHHHcCCcCEEEecCCHHHHHHCCCCCCCCCC
Confidence 9999999999999999999999999999987654
No 9
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.95 E-value=1.6e-27 Score=158.66 Aligned_cols=102 Identities=27% Similarity=0.417 Sum_probs=92.0
Q ss_pred eeCHHHHHHHhhC---CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCc
Q 032621 14 TVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 90 (137)
Q Consensus 14 ~is~~~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ 90 (137)
.||++++.++++. +++|||||++.||..|||||| +|||+. ++...+...++++++||+||.+|.
T Consensus 1 mIs~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgA--i~ip~~-----------~l~~~~~~~l~~~~~ivvyC~~g~ 67 (141)
T 3ilm_A 1 MSDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGA--MAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDE 67 (141)
T ss_dssp -CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTC--EECCGG-----------GHHHHHHTTSCTTSEEEEECSSHH
T ss_pred CCCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCC--EEcCHH-----------HHHHHHHhcCCCCCeEEEEECCCh
Confidence 4789999999974 378999999999999999999 999995 666666555788999999999999
Q ss_pred hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621 91 RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 91 ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
||..+++.|...||++|++|+||+.+|.+.|+|+++..
T Consensus 68 rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~ 105 (141)
T 3ilm_A 68 QTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGII 105 (141)
T ss_dssp HHHHHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEecCHHHHHHHCCCCcccCC
Confidence 99999999999999999999999999999999998865
No 10
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.95 E-value=3.6e-27 Score=156.15 Aligned_cols=109 Identities=27% Similarity=0.380 Sum_probs=93.5
Q ss_pred ceeeeCHHHHHHHhh-C-CCEEEecCChHHHhc-cC--CCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEE
Q 032621 11 EVITVDVRAAKNLLE-S-GYGYLDVRTAEEFKE-GH--VDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVG 85 (137)
Q Consensus 11 ~~~~is~~~~~~~~~-~-~~~viDvR~~~e~~~-g~--ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~ 85 (137)
.+..|+++++.++++ . +.+|||||++.||.. || |||| +|||+..+ .....+.. ++++++||+|
T Consensus 21 ~~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgA--inip~~~l---------~~~~~~~~-l~~~~~ivvy 88 (137)
T 1qxn_A 21 DMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNY--KHMSRGKL---------EPLLAKSG-LDPEKPVVVF 88 (137)
T ss_dssp SSEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSE--EECCTTTS---------HHHHHHHC-CCTTSCEEEE
T ss_pred cCcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCC--EEcchHHh---------hhHHhhcc-CCCCCeEEEE
Confidence 467899999999997 4 489999999999999 99 9999 99998522 11113333 5889999999
Q ss_pred eCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCCCC
Q 032621 86 CQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKPA 131 (137)
Q Consensus 86 c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~~~ 131 (137)
|.+|.||..+++.|++.||++|++|+||+.+|.+.++|++++..+.
T Consensus 89 C~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~ 134 (137)
T 1qxn_A 89 CKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRSHHH 134 (137)
T ss_dssp CCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCCCCC
T ss_pred cCCCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCcccccccc
Confidence 9999999999999999999999999999999999999999866543
No 11
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.94 E-value=6.5e-27 Score=154.86 Aligned_cols=107 Identities=22% Similarity=0.368 Sum_probs=89.7
Q ss_pred CceeeeCHHHHHHHhh--C-CCEEEecCChHHHhc-cCCCCceeeCccccccCCCCCCCChHHHHHHH-------hhccC
Q 032621 10 AEVITVDVRAAKNLLE--S-GYGYLDVRTAEEFKE-GHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR-------SLCKE 78 (137)
Q Consensus 10 ~~~~~is~~~~~~~~~--~-~~~viDvR~~~e~~~-g~ipga~~inip~~~~~~~~~~~~~~~~~~~~-------~~~~~ 78 (137)
..+..|+++++.++++ . +.+|||||++.||.. |||||| +|||+.. +...+. ..+++
T Consensus 19 ~~~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA--~~ip~~~-----------l~~~~~~~~~~~~~~~~~ 85 (139)
T 2hhg_A 19 SSIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGS--FSCTRGM-----------LEFWIDPQSPYAKPIFQE 85 (139)
T ss_dssp TTSEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTC--EECCGGG-----------HHHHHCTTSTTCCGGGGS
T ss_pred HhcCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCe--EECChHH-----------HHHhcCccchhhhccCCC
Confidence 4468999999999998 3 488999999999999 999999 9999863 222221 12478
Q ss_pred CCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621 79 EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 129 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~ 129 (137)
+++||+||.+|.||..+++.|+..||++|++|+||+.+|.+.++|++++.+
T Consensus 86 ~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 136 (139)
T 2hhg_A 86 DKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEAWAP 136 (139)
T ss_dssp SSEEEEECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC----
T ss_pred CCeEEEECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeecCCC
Confidence 899999999999999999999999999999999999999999999987644
No 12
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.93 E-value=5.2e-27 Score=149.94 Aligned_cols=99 Identities=19% Similarity=0.347 Sum_probs=85.6
Q ss_pred eeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEeCCCch
Q 032621 13 ITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQSGAR 91 (137)
Q Consensus 13 ~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c~~g~r 91 (137)
..|+++++. ..+.+|||||++.||..|||||| +|+|+. ++...+... ++++++||+||++|.|
T Consensus 5 ~~is~~el~---~~~~~liDvR~~~e~~~ghIpgA--i~ip~~-----------~l~~~~~~~~~~~~~~ivvyC~~G~r 68 (110)
T 2k0z_A 5 YAISLEEVN---FNDFIVVDVRELDEYEELHLPNA--TLISVN-----------DQEKLADFLSQHKDKKVLLHCRAGRR 68 (110)
T ss_dssp TEEETTTCC---GGGSEEEEEECHHHHHHSBCTTE--EEEETT-----------CHHHHHHHHHSCSSSCEEEECSSSHH
T ss_pred eeeCHHHhc---cCCeEEEECCCHHHHhcCcCCCC--EEcCHH-----------HHHHHHHhcccCCCCEEEEEeCCCch
Confidence 467777762 34589999999999999999999 999995 455555543 6889999999999999
Q ss_pred HHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621 92 SLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 92 a~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
|..+++.|...||++ ++|+||+.+|.+.++|++++.
T Consensus 69 s~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~p~~~~~ 104 (110)
T 2k0z_A 69 ALDAAKSMHELGYTP-YYLEGNVYDFEKYGFRMVYDD 104 (110)
T ss_dssp HHHHHHHHHHTTCCC-EEEESCGGGTTTTTCCCBCCC
T ss_pred HHHHHHHHHHCCCCE-EEecCCHHHHHHCCCcEecCC
Confidence 999999999999999 999999999999999998754
No 13
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.93 E-value=5.5e-26 Score=148.00 Aligned_cols=100 Identities=23% Similarity=0.341 Sum_probs=89.3
Q ss_pred eeeCHHHHHHHhhCC---CEEEecCChHHH-hccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCC
Q 032621 13 ITVDVRAAKNLLESG---YGYLDVRTAEEF-KEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS 88 (137)
Q Consensus 13 ~~is~~~~~~~~~~~---~~viDvR~~~e~-~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~ 88 (137)
..|+++++.++++++ .+|||||++.|| ..|||||| +|||+. ++...+.. ++++++||+||.+
T Consensus 15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA--~nip~~-----------~l~~~~~~-l~~~~~ivvyC~~ 80 (124)
T 3flh_A 15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGA--IAMPAK-----------DLATRIGE-LDPAKTYVVYDWT 80 (124)
T ss_dssp TEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTC--EECCHH-----------HHHHHGGG-SCTTSEEEEECSS
T ss_pred ceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCC--EECCHH-----------HHHHHHhc-CCCCCeEEEEeCC
Confidence 579999999998763 799999999998 99999999 999995 66666655 4889999999999
Q ss_pred Cch--HHHHHHHHHHCCccceeeccccHHHHHhCCCceecC
Q 032621 89 GAR--SLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAR 127 (137)
Q Consensus 89 g~r--a~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~ 127 (137)
|.| |..+++.|++.||+ |++|+||+.+|...++|+.+.
T Consensus 81 g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~ 120 (124)
T 3flh_A 81 GGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEHH 120 (124)
T ss_dssp SSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC-
T ss_pred CCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCcc
Confidence 998 89999999999997 999999999999999998764
No 14
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.93 E-value=4.2e-26 Score=152.20 Aligned_cols=103 Identities=23% Similarity=0.324 Sum_probs=88.5
Q ss_pred eeeCHHHHHHHhhCC---CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCC
Q 032621 13 ITVDVRAAKNLLESG---YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG 89 (137)
Q Consensus 13 ~~is~~~~~~~~~~~---~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g 89 (137)
..|+++++.+.++++ .+|||||++.||..|||||| +|||+..+... .+. .++++++||+||.+|
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgA--inip~~~l~~~----------~~~-~l~~~~~ivvyC~~g 82 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTA--ISIPGNKINED----------TTK-RLSKEKVIITYCWGP 82 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTC--EECCGGGCSTT----------TTT-TCCTTSEEEEECSCT
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCC--EECCHHHHhHH----------HHh-hCCCCCeEEEEECCC
Confidence 478999999999764 78999999999999999999 99999643211 122 257889999999998
Q ss_pred --chHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621 90 --ARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 129 (137)
Q Consensus 90 --~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~ 129 (137)
.||..+++.|+..|| +|++|+||+.+|.+.|+|+++...
T Consensus 83 ~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~~~~ 123 (144)
T 3nhv_A 83 ACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEGTLG 123 (144)
T ss_dssp TCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBSSSG
T ss_pred CccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccCCCC
Confidence 799999999999999 599999999999999999988653
No 15
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.93 E-value=5.3e-27 Score=145.88 Aligned_cols=93 Identities=26% Similarity=0.233 Sum_probs=76.8
Q ss_pred eeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchH
Q 032621 13 ITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARS 92 (137)
Q Consensus 13 ~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra 92 (137)
+.|+++++.++++++.+|||||++.||..|||||| +|+|+.. +...+.. +++ ++||+||++|.||
T Consensus 2 ~~is~~~l~~~~~~~~~liDvR~~~e~~~ghi~gA--i~ip~~~-----------l~~~~~~-l~~-~~ivvyC~~g~rs 66 (94)
T 1wv9_A 2 RKVRPEELPALLEEGVLVVDVRPADRRSTPLPFAA--EWVPLEK-----------IQKGEHG-LPR-RPLLLVCEKGLLS 66 (94)
T ss_dssp CEECGGGHHHHHHTTCEEEECCCC--CCSCCSSCC--EECCHHH-----------HTTTCCC-CCS-SCEEEECSSSHHH
T ss_pred CcCCHHHHHHHHHCCCEEEECCCHHHHhcccCCCC--EECCHHH-----------HHHHHHh-CCC-CCEEEEcCCCChH
Confidence 57899999999887899999999999999999999 9999963 3322323 467 9999999999999
Q ss_pred HHHHHHHHHCCccceeeccccHHHHHhCC
Q 032621 93 LHATADLLGAGFKHVSNFGGGHMAWVQNG 121 (137)
Q Consensus 93 ~~~~~~l~~~G~~~v~~l~GG~~~w~~~~ 121 (137)
..+++.|++.||+ |++|+||+.+|.+.|
T Consensus 67 ~~a~~~L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 67 QVAALYLEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp HHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred HHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence 9999999999999 999999999997654
No 16
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=2.7e-25 Score=148.76 Aligned_cols=113 Identities=23% Similarity=0.319 Sum_probs=90.5
Q ss_pred ceeeeCHHHHHHHhhC--CCEEEecCChHHHhc-cCC------CCceeeCccccccCCCCCCCChHHHHHHHhh-----c
Q 032621 11 EVITVDVRAAKNLLES--GYGYLDVRTAEEFKE-GHV------DAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-----C 76 (137)
Q Consensus 11 ~~~~is~~~~~~~~~~--~~~viDvR~~~e~~~-g~i------pga~~inip~~~~~~~~~~~~~~~~~~~~~~-----~ 76 (137)
-...|+++++.+++++ +.+|||||++.||.. ||| ||| +|||+.. ..... .+.|...+... +
T Consensus 3 ~~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgA--v~ip~~~--~~~~~-~~~~~~~l~~~l~~~~~ 77 (148)
T 2fsx_A 3 YAGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREV--VYVEWAT--SDGTH-NDNFLAELRDRIPADAD 77 (148)
T ss_dssp CSEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCC--EECCSBC--TTSCB-CTTHHHHHHHHCC----
T ss_pred ccccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCc--EEeeeec--ccccc-CHHHHHHHHHHHhhccC
Confidence 3468999999999874 589999999999997 999 999 9999975 11111 23455555543 3
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH------------HHHHhCCCceecCC
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH------------MAWVQNGLKVKARE 128 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~------------~~w~~~~~p~~~~~ 128 (137)
+++++||+||++|.||..+++.|...||++|++|+||+ .+|.+.|+|++...
T Consensus 78 ~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~~ 141 (148)
T 2fsx_A 78 QHERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGR 141 (148)
T ss_dssp ---CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC-
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCccc
Confidence 78899999999999999999999999999999999999 68999999988754
No 17
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.91 E-value=2e-24 Score=141.50 Aligned_cols=104 Identities=26% Similarity=0.368 Sum_probs=80.2
Q ss_pred ceeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCC----------------------CCCChHH
Q 032621 11 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEG----------------------RVKNPDF 68 (137)
Q Consensus 11 ~~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~----------------------~~~~~~~ 68 (137)
.+..|+++++.+ ..+.+|||||++.||..|||||| +|||+..+.... ....+++
T Consensus 3 ~~~~i~~~el~~--~~~~~iiDvR~~~e~~~ghIpgA--~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (134)
T 3g5j_A 3 AMSVIKIEKALK--LDKVIFVDVRTEGEYEEDHILNA--INMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDI 78 (134)
T ss_dssp --CEECHHHHTT--CTTEEEEECSCHHHHHHCCCTTC--EECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHHH
T ss_pred CccccCHHHHHh--cCCcEEEEcCCHHHHhcCCCCCC--EEcCccchhhhhcccceeeecChhHHHhcccccccccHHHH
Confidence 357899999977 45689999999999999999999 999995211000 0000134
Q ss_pred HHHHHhhccCC-CcEEEEe-CCCchHHHHHHHHHHCCccceeeccccHHHHHhC
Q 032621 69 LKKVRSLCKEE-DRLVVGC-QSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN 120 (137)
Q Consensus 69 ~~~~~~~~~~~-~~iv~~c-~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~ 120 (137)
...+..+ +++ ++||+|| .+|.||..+++.|+.+|| +|++|+||+.+|.+.
T Consensus 79 ~~~~~~~-~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~ 130 (134)
T 3g5j_A 79 YLQAAEL-ALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNF 130 (134)
T ss_dssp HHHHHHH-HTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHH
T ss_pred HHHHHHh-ccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHH
Confidence 4444443 677 8999999 589999999999999999 899999999999764
No 18
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.91 E-value=6.5e-25 Score=147.63 Aligned_cols=109 Identities=19% Similarity=0.261 Sum_probs=89.7
Q ss_pred CceeeeCHHHHHHHhhC-CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeC-
Q 032621 10 AEVITVDVRAAKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQ- 87 (137)
Q Consensus 10 ~~~~~is~~~~~~~~~~-~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~- 87 (137)
..+..|+++++.+++++ +.+|||||++.||..|||||| +|||+..+. +....+...++++++||+||+
T Consensus 25 ~~~~~Is~~el~~~l~~~~~~lIDvR~~~ey~~ghIpgA--inip~~~l~--------~~~~~l~~~~~~~~~iVvyC~~ 94 (152)
T 1t3k_A 25 RSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGS--LHYASGSFD--------DKISHLVQNVKDKDTLVFHSAL 94 (152)
T ss_dssp SSSEEECTTTTTTCCCCTTEEEEEESCSHHHHSSCCCSS--EEECCSSSS--------TTHHHHHHTCCSCCEEEESSSC
T ss_pred CCCceECHHHHHHHhcCCCEEEEECCChhhccCccCCCC--EECCHHHHH--------HHHHHHHHhcCCCCEEEEEcCC
Confidence 45689999999988864 488999999999999999999 999996432 112333222478899999999
Q ss_pred CCchHHHHHHHHHH--------CCccceeeccccHHHHHhCCCceecCC
Q 032621 88 SGARSLHATADLLG--------AGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 88 ~g~ra~~~~~~l~~--------~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
+|.|+..++..|.+ .||++|++|+||+.+|.+.++|+++..
T Consensus 95 ~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 143 (152)
T 1t3k_A 95 SQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCA 143 (152)
T ss_dssp CSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCS
T ss_pred CCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCC
Confidence 99999888887743 899999999999999999999998754
No 19
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.91 E-value=8.4e-24 Score=153.66 Aligned_cols=115 Identities=17% Similarity=0.158 Sum_probs=98.3
Q ss_pred eeeCHHHHHHHhhC-CCEEEecCChHHHhccCCCCceeeCccccccCCC-----CCC-CChHHHHHHHhh-ccCCCcEEE
Q 032621 13 ITVDVRAAKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPE-----GRV-KNPDFLKKVRSL-CKEEDRLVV 84 (137)
Q Consensus 13 ~~is~~~~~~~~~~-~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~-----~~~-~~~~~~~~~~~~-~~~~~~iv~ 84 (137)
+.|+++++.+++++ +.+|||||++.||..|||||| +|+|+..+... ..+ +...|.+.+.++ ++++++||+
T Consensus 9 ~~is~~~l~~~l~~~~~~iiDvR~~~ey~~ghIpgA--~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvv 86 (271)
T 1e0c_A 9 LVIEPADLQARLSAPELILVDLTSAARYAEGHIPGA--RFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVV 86 (271)
T ss_dssp SEECHHHHHTTTTCTTEEEEECSCHHHHHHCBSTTC--EECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEEE
T ss_pred ceeeHHHHHHhccCCCeEEEEcCCcchhhhCcCCCC--EECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 48999999999865 589999999999999999999 99998765322 122 234677777776 789999999
Q ss_pred EeCCCc-hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621 85 GCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 129 (137)
Q Consensus 85 ~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~ 129 (137)
||.+|. +|..+++.|+.+||++|++|+||+.+|...++|+++...
T Consensus 87 yc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~~~~ 132 (271)
T 1e0c_A 87 YDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELP 132 (271)
T ss_dssp ECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred EcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccCCCC
Confidence 999988 999999999999999999999999999999999987654
No 20
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.90 E-value=2.3e-24 Score=142.04 Aligned_cols=110 Identities=22% Similarity=0.273 Sum_probs=91.2
Q ss_pred eeeeCHHHHHHHhhC--CCEEEecCChHHHhc-cCC------CCceeeCccccccCCCCCCCChHHHHHHHhhc--cCCC
Q 032621 12 VITVDVRAAKNLLES--GYGYLDVRTAEEFKE-GHV------DAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC--KEED 80 (137)
Q Consensus 12 ~~~is~~~~~~~~~~--~~~viDvR~~~e~~~-g~i------pga~~inip~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 80 (137)
...|+++++.+++++ +.+|||||++.||.. +|+ ||| +|||+..+ ....|...+.... ++++
T Consensus 4 ~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga--~~ip~~~~------~~~~~~~~l~~~~~~~~~~ 75 (134)
T 1vee_A 4 GSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKA--VSTVYNGE------DKPGFLKKLSLKFKDPENT 75 (134)
T ss_dssp SCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCC--EECCCCGG------GHHHHHHHHHTTCSCGGGC
T ss_pred CCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCce--EEeecccc------cChhHHHHHHHHhCCCCCC
Confidence 457999999999873 489999999999986 444 799 99998532 1234666665543 6889
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCccceeeccccH---HHHHhCCCceecCCC
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH---MAWVQNGLKVKAREK 129 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~---~~w~~~~~p~~~~~~ 129 (137)
+||+||++|.||..++..|.++||++|+.|.||+ .+|.+.++|++++..
T Consensus 76 ~ivv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~~ 127 (134)
T 1vee_A 76 TLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPKK 127 (134)
T ss_dssp EEEEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECCCC
T ss_pred EEEEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCCCCC
Confidence 9999999999999999999999999999999999 789999999987654
No 21
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.90 E-value=1.4e-24 Score=141.22 Aligned_cols=105 Identities=28% Similarity=0.258 Sum_probs=82.1
Q ss_pred eeeCHHHHHHHhhCC--CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHH----HHhh-----ccCCCc
Q 032621 13 ITVDVRAAKNLLESG--YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKK----VRSL-----CKEEDR 81 (137)
Q Consensus 13 ~~is~~~~~~~~~~~--~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~----~~~~-----~~~~~~ 81 (137)
.+|+++++.++++++ .+|||||++.||..|||||| +|||+..+.... ..+... +... ++++++
T Consensus 1 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~ 74 (127)
T 3i2v_A 1 SRVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHA--LHIPLKHLERRD----AESLKLLKEAIWEEKQGTQEGAAVP 74 (127)
T ss_dssp CEECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTS--EECCHHHHHTTC----HHHHHHHHHHHHHHHTTC---CCEE
T ss_pred CCCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCc--eeCChHHHhhhh----hhhHHHHHHHHhhhcccccCCCCCe
Confidence 368999999999764 89999999999999999999 999996542211 122222 2111 233459
Q ss_pred EEEEeCCCchHHHHHHHHHHC------CccceeeccccHHHHHhCCCc
Q 032621 82 LVVGCQSGARSLHATADLLGA------GFKHVSNFGGGHMAWVQNGLK 123 (137)
Q Consensus 82 iv~~c~~g~ra~~~~~~l~~~------G~~~v~~l~GG~~~w~~~~~p 123 (137)
||+||.+|.||..++++|.+. |+.+|++|+||+.+|.+...|
T Consensus 75 ivv~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~ 122 (127)
T 3i2v_A 75 IYVICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG 122 (127)
T ss_dssp EEEECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred EEEEcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence 999999999999999999998 688999999999999886554
No 22
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.90 E-value=1.3e-23 Score=153.36 Aligned_cols=115 Identities=20% Similarity=0.262 Sum_probs=98.1
Q ss_pred eeeCHHHHHHHhhC-CCEEEecC----------ChHHHhccCCCCceeeCccccccCCC-----CCC-CChHHHHHHHhh
Q 032621 13 ITVDVRAAKNLLES-GYGYLDVR----------TAEEFKEGHVDAAKIFNIPYMFNTPE-----GRV-KNPDFLKKVRSL 75 (137)
Q Consensus 13 ~~is~~~~~~~~~~-~~~viDvR----------~~~e~~~g~ipga~~inip~~~~~~~-----~~~-~~~~~~~~~~~~ 75 (137)
..|+++++.+++++ +.+||||| ++.||..|||||| +|+|+..+... ..+ +...|.+.+..+
T Consensus 4 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgA--i~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 81 (280)
T 1urh_A 4 WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGA--VFFDIEALSDHTSPLPHMLPRPETFAVAMREL 81 (280)
T ss_dssp CEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTC--EECCGGGGSCSSSSSSSCCCCHHHHHHHHHHT
T ss_pred ceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCC--EECCHHHhcCCCCCCCCCCCCHHHHHHHHHHc
Confidence 58999999999875 58999999 7899999999999 99998755321 122 235677778776
Q ss_pred -ccCCCcEEEEeCCCch-HHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621 76 -CKEEDRLVVGCQSGAR-SLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 129 (137)
Q Consensus 76 -~~~~~~iv~~c~~g~r-a~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~ 129 (137)
++++++||+||++|.+ |..+++.|+.+||++|++|+||+.+|.+.++|+++...
T Consensus 82 gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 137 (280)
T 1urh_A 82 GVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAV 137 (280)
T ss_dssp TCCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCC
T ss_pred CCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccCCCC
Confidence 7899999999999998 99999999999999999999999999999999987654
No 23
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.90 E-value=9.6e-24 Score=153.33 Aligned_cols=112 Identities=19% Similarity=0.287 Sum_probs=94.5
Q ss_pred eeeCHHHHHHHhhCC-CEEEecCChHHHh--------ccCCCCceeeCccccccCCC--CCCCChHHHHHHHhh-ccCCC
Q 032621 13 ITVDVRAAKNLLESG-YGYLDVRTAEEFK--------EGHVDAAKIFNIPYMFNTPE--GRVKNPDFLKKVRSL-CKEED 80 (137)
Q Consensus 13 ~~is~~~~~~~~~~~-~~viDvR~~~e~~--------~g~ipga~~inip~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ 80 (137)
..|+++++.+.++++ .+|||||++.||. .|||||| +|+|+..+... ......++.+.+... +++++
T Consensus 147 ~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~~~~ghIpgA--~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (271)
T 1e0c_A 147 PTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGA--VNFEWTAAMDPSRALRIRTDIAGRLEELGITPDK 224 (271)
T ss_dssp TBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCSSSCSBCTTC--EECCGGGGEEGGGTTEECTTHHHHHHHTTCCTTS
T ss_pred ccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCCCcCCcCCCc--eeccHHHhCCCCCCCCCHHHHHHHHHHcCCCCCC
Confidence 468999999998764 8899999999999 8999999 99999765211 122224666667654 78999
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhC-CCceec
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN-GLKVKA 126 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~-~~p~~~ 126 (137)
+||+||++|.||..+++.|..+||++|++|+||+.+|.+. ++|+++
T Consensus 225 ~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~~ 271 (271)
T 1e0c_A 225 EIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL 271 (271)
T ss_dssp EEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCBC
T ss_pred CEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCcC
Confidence 9999999999999999999999999999999999999988 898763
No 24
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.90 E-value=4.1e-24 Score=130.42 Aligned_cols=76 Identities=30% Similarity=0.516 Sum_probs=69.1
Q ss_pred CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEeCCCchHHHHHHHHHHCCccc
Q 032621 28 YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQSGARSLHATADLLGAGFKH 106 (137)
Q Consensus 28 ~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~ 106 (137)
.+|||||++.||..|||||| +|+|+. ++.+.+.++ ++++++||+||++|.||..+++.|.+.||++
T Consensus 2 ~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~ 68 (85)
T 2jtq_A 2 EHWIDVRVPEQYQQEHVQGA--INIPLK-----------EVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTH 68 (85)
T ss_dssp EEEEECSCHHHHTTEEETTC--EECCHH-----------HHHHHHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCSS
T ss_pred CEEEECCCHHHHHhCCCCCC--EEcCHH-----------HHHHHHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCCC
Confidence 57999999999999999999 999995 666666665 5788999999999999999999999999999
Q ss_pred eeeccccHHHH
Q 032621 107 VSNFGGGHMAW 117 (137)
Q Consensus 107 v~~l~GG~~~w 117 (137)
|+++ ||+.+|
T Consensus 69 v~~l-GG~~~w 78 (85)
T 2jtq_A 69 VENA-GGLKDI 78 (85)
T ss_dssp EEEE-EETTTC
T ss_pred EEec-cCHHHH
Confidence 9999 998888
No 25
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.90 E-value=3.2e-23 Score=154.15 Aligned_cols=115 Identities=13% Similarity=0.152 Sum_probs=96.4
Q ss_pred eeeeCHHHHHHHhhC-CCEEEecCChHH-HhccCCCCceeeCcccccc---CCCCCC-CChHHHHHHHhh-ccCCCcEEE
Q 032621 12 VITVDVRAAKNLLES-GYGYLDVRTAEE-FKEGHVDAAKIFNIPYMFN---TPEGRV-KNPDFLKKVRSL-CKEEDRLVV 84 (137)
Q Consensus 12 ~~~is~~~~~~~~~~-~~~viDvR~~~e-~~~g~ipga~~inip~~~~---~~~~~~-~~~~~~~~~~~~-~~~~~~iv~ 84 (137)
...|+++++.+++++ +.+|||||+..| |..|||||| +|+|+... .....+ +..+|...+.++ ++++++||+
T Consensus 39 ~~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGA--i~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vVv 116 (318)
T 3hzu_A 39 ERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGA--VKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVI 116 (318)
T ss_dssp GGEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTE--EECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEE
T ss_pred CceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCC--eEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 457999999999965 489999999876 999999999 99997421 111222 224677788776 889999999
Q ss_pred EeCCCc-hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621 85 GCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 85 ~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
||++|. +|.++++.|+.+||++|++|+||+.+|.+.|+|+++..
T Consensus 117 yc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 161 (318)
T 3hzu_A 117 YGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDV 161 (318)
T ss_dssp ECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCC
T ss_pred ECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccCC
Confidence 999887 99999999999999999999999999999999998754
No 26
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.89 E-value=2.5e-23 Score=151.89 Aligned_cols=114 Identities=21% Similarity=0.326 Sum_probs=86.5
Q ss_pred ceeeeCHHHHHHHhhC-CCEEEecCChHHH-----------hccCCCCceeeCccccccCCCCCCCCh-HHHHHHHhh-c
Q 032621 11 EVITVDVRAAKNLLES-GYGYLDVRTAEEF-----------KEGHVDAAKIFNIPYMFNTPEGRVKNP-DFLKKVRSL-C 76 (137)
Q Consensus 11 ~~~~is~~~~~~~~~~-~~~viDvR~~~e~-----------~~g~ipga~~inip~~~~~~~~~~~~~-~~~~~~~~~-~ 76 (137)
....|+++++.+++++ +.+|||||++.|| ..|||||| +|||+..+...+.+... ++.+.+... +
T Consensus 150 ~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA--~nip~~~~~~~~~~~~~~~l~~~~~~~~~ 227 (280)
T 1urh_A 150 PEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGA--LNVPWTELVREGELKTTDELDAIFFGRGV 227 (280)
T ss_dssp GGGBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTC--EECCGGGGBSSSSBCCHHHHHHHHHTTTC
T ss_pred cccEEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCccCCCc--eEeeHHHhhcCCccCCHHHHHHHHHHcCC
Confidence 3456999999999875 4899999999999 68999999 99999876544333333 344444433 6
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhC-CCceec
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQN-GLKVKA 126 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~-~~p~~~ 126 (137)
+++++||+||.+|.||..++..|..+||++|++|+||+.+|.+. ++|+++
T Consensus 228 ~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~ 278 (280)
T 1urh_A 228 SYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEP 278 (280)
T ss_dssp CSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC-----------
T ss_pred CCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCcee
Confidence 88999999999999999999999999999999999999999874 899875
No 27
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.89 E-value=1e-22 Score=149.90 Aligned_cols=116 Identities=17% Similarity=0.325 Sum_probs=96.5
Q ss_pred eeeeCHHHHHHHhhC-CCEEEecCChHHH------------hccCCCCceeeCccccccCC-CCCCCC-hHHHHHHHhh-
Q 032621 12 VITVDVRAAKNLLES-GYGYLDVRTAEEF------------KEGHVDAAKIFNIPYMFNTP-EGRVKN-PDFLKKVRSL- 75 (137)
Q Consensus 12 ~~~is~~~~~~~~~~-~~~viDvR~~~e~------------~~g~ipga~~inip~~~~~~-~~~~~~-~~~~~~~~~~- 75 (137)
...|+++++.+.+++ +.+|||||++.|| ..|||||| +|||+..+.. .+.+.. .++.+.+...
T Consensus 159 ~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA--~nip~~~l~~~~~~~~~~~~l~~~~~~~~ 236 (296)
T 1rhs_A 159 SLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGS--VNMPFMNFLTEDGFEKSPEELRAMFEAKK 236 (296)
T ss_dssp GGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTC--EECCGGGGBCTTSCBCCHHHHHHHHHHTT
T ss_pred ceEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcCccCCCC--EeecHHHhcCCCCcCCCHHHHHHHHHHcC
Confidence 468999999998875 4899999999999 78999999 9999976632 333333 3444445443
Q ss_pred ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHh-CCCceecCCC
Q 032621 76 CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ-NGLKVKAREK 129 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~-~~~p~~~~~~ 129 (137)
++++++||+||++|.||..++..|..+||++|++|+||+.+|.+ .++|+++...
T Consensus 237 ~~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~~~ 291 (296)
T 1rhs_A 237 VDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQG 291 (296)
T ss_dssp CCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEBTT
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCcccCCC
Confidence 68899999999999999999999999999999999999999988 7999987653
No 28
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.89 E-value=5.6e-23 Score=152.82 Aligned_cols=116 Identities=28% Similarity=0.448 Sum_probs=96.0
Q ss_pred eeeCHHHHHHHhhCCCEEEecCChHHHhc----------------cCCCCceeeCcccccc-CCCCCCCChHHHHHHHhh
Q 032621 13 ITVDVRAAKNLLESGYGYLDVRTAEEFKE----------------GHVDAAKIFNIPYMFN-TPEGRVKNPDFLKKVRSL 75 (137)
Q Consensus 13 ~~is~~~~~~~~~~~~~viDvR~~~e~~~----------------g~ipga~~inip~~~~-~~~~~~~~~~~~~~~~~~ 75 (137)
..++++++.+.++++ +|||||++.||.. |||||| +|||+..+ ++.+.+...+........
T Consensus 179 ~~i~~~el~~~l~~~-~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA--~niP~~~~~~~~g~~~~~~~l~~~~~~ 255 (318)
T 3hzu_A 179 IRAFRDDVLAILGAQ-PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTA--VHIPWGKAADESGRFRSREELERLYDF 255 (318)
T ss_dssp TBCCHHHHHHHTTTS-CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTC--EECCGGGGBCTTSCBCCHHHHHHHTTT
T ss_pred ccccHHHHHHhhcCC-eEEecCCHHHhcccccCccccccccCCcCcCCCCe--eecCHHHhcCCCCcCCCHHHHHHHhcC
Confidence 468899999999886 9999999999998 999999 99999754 444555443333333233
Q ss_pred ccCCCcEEEEeCCCchHHHHHHHHHH-CCccceeeccccHHHHHh-CCCceecCCCCC
Q 032621 76 CKEEDRLVVGCQSGARSLHATADLLG-AGFKHVSNFGGGHMAWVQ-NGLKVKAREKPA 131 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~ra~~~~~~l~~-~G~~~v~~l~GG~~~w~~-~~~p~~~~~~~~ 131 (137)
++++++||+||++|.||..++..|.+ +||++|++|+||+.+|.+ .++|++++..+.
T Consensus 256 l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~~~~ 313 (318)
T 3hzu_A 256 INPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGEEPG 313 (318)
T ss_dssp CCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBCSSSCC
T ss_pred CCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCCCCC
Confidence 68899999999999999999999997 999999999999999995 699999876443
No 29
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.89 E-value=5.3e-23 Score=139.17 Aligned_cols=107 Identities=14% Similarity=0.238 Sum_probs=89.0
Q ss_pred CCceeeeCHHHHHHHhhC-------CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHH-Hh---hcc
Q 032621 9 GAEVITVDVRAAKNLLES-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKV-RS---LCK 77 (137)
Q Consensus 9 ~~~~~~is~~~~~~~~~~-------~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~-~~---~~~ 77 (137)
...++.|+++++.+++++ +.+|||||++.||..|||||| +|||+. ++.... .. +++
T Consensus 19 ~~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgA--inip~~-----------~~~~~~~~~~~~~~~ 85 (161)
T 1c25_A 19 HQDLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGA--VNLHME-----------EEVEDFLLKKPIVPT 85 (161)
T ss_dssp CTTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTC--EECCSH-----------HHHHHHTTTSCCCCC
T ss_pred CCCcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCc--EeCChh-----------HHHHHHHhhhhhccC
Confidence 345789999999999975 478999999999999999999 999995 444333 21 135
Q ss_pred CCCcE--EEEeC-CCchHHHHHHHHHH----------CCccceeeccccHHHHHhCCCceecCC
Q 032621 78 EEDRL--VVGCQ-SGARSLHATADLLG----------AGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 78 ~~~~i--v~~c~-~g~ra~~~~~~l~~----------~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
++++| |+||. +|.||..++..|++ +||++|++|+||+.+|.+.+.|+..+.
T Consensus 86 ~~~~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~~ 149 (161)
T 1c25_A 86 DGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEPP 149 (161)
T ss_dssp TTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEESS
T ss_pred CCCCeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCCC
Confidence 67776 67899 99999999999986 499999999999999999999888764
No 30
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.89 E-value=8.5e-23 Score=161.07 Aligned_cols=107 Identities=18% Similarity=0.246 Sum_probs=94.5
Q ss_pred CCceeeeCHHHHHHHhhC--CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEE
Q 032621 9 GAEVITVDVRAAKNLLES--GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVG 85 (137)
Q Consensus 9 ~~~~~~is~~~~~~~~~~--~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~ 85 (137)
+..++.|+++++.+++++ +.+|||||++.||..|||||| +|||+. +|...+..+ ++++++||+|
T Consensus 3 ~~~~~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgA--v~ip~~-----------~~~~~~~~l~~~~~~~iVvy 69 (539)
T 1yt8_A 3 LSQIAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFA--ANLPLS-----------RLELEIHARVPRRDTPITVY 69 (539)
T ss_dssp ---CEEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTC--EECCGG-----------GHHHHHHHHSCCTTSCEEEE
T ss_pred CCcCcccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCC--EECCHH-----------HHHHHHHhhCCCCCCeEEEE
Confidence 345789999999999975 489999999999999999999 999995 677777766 4578999999
Q ss_pred eCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621 86 CQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 86 c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
|++|.+|..+++.|+.+||++|++|+||+.+|.+.|+|++++.
T Consensus 70 c~~g~~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 112 (539)
T 1yt8_A 70 DDGEGLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRDV 112 (539)
T ss_dssp CSSSSHHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCBCSS
T ss_pred ECCCChHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcccCC
Confidence 9999999999999999999999999999999999999997653
No 31
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.89 E-value=1.1e-22 Score=148.65 Aligned_cols=113 Identities=26% Similarity=0.432 Sum_probs=94.3
Q ss_pred eeeCHHHHHHHhh----CCCEEEecCChHHHh----------------ccCCCCceeeCccccccC-CCCCCCC-hHHHH
Q 032621 13 ITVDVRAAKNLLE----SGYGYLDVRTAEEFK----------------EGHVDAAKIFNIPYMFNT-PEGRVKN-PDFLK 70 (137)
Q Consensus 13 ~~is~~~~~~~~~----~~~~viDvR~~~e~~----------------~g~ipga~~inip~~~~~-~~~~~~~-~~~~~ 70 (137)
..|+++++.+.++ .+..|||||++.||. .|||||| +|+|+..+. ..+.+.+ .++.+
T Consensus 146 ~~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA--~~ip~~~~~~~~~~~~~~~~l~~ 223 (285)
T 1uar_A 146 IRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGA--KNIPWAKAVNPDGTFKSAEELRA 223 (285)
T ss_dssp GEECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTC--EECCGGGGBCTTSCBCCHHHHHH
T ss_pred eEEcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCc--cccCHHHhcCCCCcCCCHHHHHH
Confidence 5699999999984 446799999999997 7999999 999987653 2333333 34555
Q ss_pred HHHhh-ccCCCcEEEEeCCCchHHHHHHHHH-HCCccceeeccccHHHHH-hCCCceecC
Q 032621 71 KVRSL-CKEEDRLVVGCQSGARSLHATADLL-GAGFKHVSNFGGGHMAWV-QNGLKVKAR 127 (137)
Q Consensus 71 ~~~~~-~~~~~~iv~~c~~g~ra~~~~~~l~-~~G~~~v~~l~GG~~~w~-~~~~p~~~~ 127 (137)
.+... ++++++||+||++|.||..+++.|. .+||++|++|+||+.+|. ..++|++++
T Consensus 224 ~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 283 (285)
T 1uar_A 224 LYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKG 283 (285)
T ss_dssp HHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCS
T ss_pred HHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCcccC
Confidence 66554 6889999999999999999999999 999999999999999998 689999874
No 32
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.89 E-value=1.8e-22 Score=148.59 Aligned_cols=115 Identities=21% Similarity=0.222 Sum_probs=96.2
Q ss_pred eeeeCHHHHHHHhhC-----CCEEEecC--------ChHHHhccCCCCceeeCccccccCCC-----CCCC-ChHHHHHH
Q 032621 12 VITVDVRAAKNLLES-----GYGYLDVR--------TAEEFKEGHVDAAKIFNIPYMFNTPE-----GRVK-NPDFLKKV 72 (137)
Q Consensus 12 ~~~is~~~~~~~~~~-----~~~viDvR--------~~~e~~~g~ipga~~inip~~~~~~~-----~~~~-~~~~~~~~ 72 (137)
-+.|+++++.+++++ +.+||||| ++.||..|||||| +|+|+..+... ..+. ...|.+.+
T Consensus 7 ~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGA--i~ip~~~l~~~~~~~~~~lp~~~~~~~~l 84 (296)
T 1rhs_A 7 RALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGA--SFFDIEECRDKASPYEVMLPSEAGFADYV 84 (296)
T ss_dssp CSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTC--EECCTTTSSCTTSSSSSCCCCHHHHHHHH
T ss_pred CceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCC--EEeCHHHhcCCCCCCCCCCCCHHHHHHHH
Confidence 358999999999975 58899999 6899999999999 99998754321 1222 24677777
Q ss_pred Hhh-ccCCCcEEEEeCC--Cch-HHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621 73 RSL-CKEEDRLVVGCQS--GAR-SLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 73 ~~~-~~~~~~iv~~c~~--g~r-a~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
..+ ++++++||+||.+ |.+ |.++++.|+.+||++|++|+||+.+|.+.++|+++..
T Consensus 85 ~~lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 144 (296)
T 1rhs_A 85 GSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEP 144 (296)
T ss_dssp HHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSC
T ss_pred HHcCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccccCC
Confidence 766 7889999999998 876 8899999999999999999999999999999998764
No 33
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.89 E-value=9.3e-23 Score=150.65 Aligned_cols=111 Identities=23% Similarity=0.337 Sum_probs=93.2
Q ss_pred eeeeCHHHHHHHhhC-CCEEEecCChHHH-----------hccCCCCceeeCccccccC-CCCCCC-ChHHHHHHHhh-c
Q 032621 12 VITVDVRAAKNLLES-GYGYLDVRTAEEF-----------KEGHVDAAKIFNIPYMFNT-PEGRVK-NPDFLKKVRSL-C 76 (137)
Q Consensus 12 ~~~is~~~~~~~~~~-~~~viDvR~~~e~-----------~~g~ipga~~inip~~~~~-~~~~~~-~~~~~~~~~~~-~ 76 (137)
...++++++.+.+++ +.+|||||++.|| ..|||||| +|||+..+. ..+.+. ..++.+.+... +
T Consensus 174 ~~~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGA--iniP~~~l~~~~~~~~~~~~l~~~~~~~~~ 251 (302)
T 3olh_A 174 AFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGT--VNIPFTDFLSQEGLEKSPEEIRHLFQEKKV 251 (302)
T ss_dssp GGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTC--EECCGGGGBCSSSCBCCHHHHHHHHHHTTC
T ss_pred cceecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcCccCCCc--eecCHHHhcCCCCccCCHHHHHHHHHhcCC
Confidence 357899999998875 4899999999999 78999999 999998763 333333 34555555554 7
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCce
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKV 124 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~ 124 (137)
+++++||+||++|.||..++..|..+||++|++|+||+.+|.+.++|.
T Consensus 252 ~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~ 299 (302)
T 3olh_A 252 DLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPE 299 (302)
T ss_dssp CTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCC
T ss_pred CCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCC
Confidence 889999999999999999999999999999999999999999888764
No 34
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.88 E-value=1.9e-22 Score=142.14 Aligned_cols=107 Identities=15% Similarity=0.254 Sum_probs=89.0
Q ss_pred CCceeeeCHHHHHHHhhC-------CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHH-HHh--hc--
Q 032621 9 GAEVITVDVRAAKNLLES-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKK-VRS--LC-- 76 (137)
Q Consensus 9 ~~~~~~is~~~~~~~~~~-------~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~-~~~--~~-- 76 (137)
...+..|+++++.+++++ +.+|||||++.||..|||||| +|||+. ++... +.. .+
T Consensus 40 ~~~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGA--inip~~-----------~l~~~~~~~~~~l~~ 106 (211)
T 1qb0_A 40 HQDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTA--VNLPLE-----------RDAESFLLKSPIAPC 106 (211)
T ss_dssp STTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTC--EECCSH-----------HHHHHHHHTTTCCCS
T ss_pred cCCCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCC--EECCch-----------HHHHHhhhhhhhccc
Confidence 356789999999999975 478999999999999999999 999995 33332 321 22
Q ss_pred cCCCcE--EEEeC-CCchHHHHHHHHHH----------CCccceeeccccHHHHHhCCCceecCC
Q 032621 77 KEEDRL--VVGCQ-SGARSLHATADLLG----------AGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 77 ~~~~~i--v~~c~-~g~ra~~~~~~l~~----------~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
+++++| |+||. +|.||..+++.|.+ +||++|++|+||+.+|.+.+.|+..+.
T Consensus 107 ~~d~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~~~ 171 (211)
T 1qb0_A 107 SLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEPQ 171 (211)
T ss_dssp STTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEESS
T ss_pred cCCCCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccCCC
Confidence 367887 78899 99999999999986 699999999999999999999886643
No 35
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.88 E-value=2.6e-22 Score=148.21 Aligned_cols=115 Identities=17% Similarity=0.165 Sum_probs=94.9
Q ss_pred eeeeCHHHHHHHhhC-----CCEEEecC---------ChHHHhccCCCCceeeCccccccCCC-----CCC-CChHHHHH
Q 032621 12 VITVDVRAAKNLLES-----GYGYLDVR---------TAEEFKEGHVDAAKIFNIPYMFNTPE-----GRV-KNPDFLKK 71 (137)
Q Consensus 12 ~~~is~~~~~~~~~~-----~~~viDvR---------~~~e~~~g~ipga~~inip~~~~~~~-----~~~-~~~~~~~~ 71 (137)
.+.|+++++.+++++ +.+||||| +..||..|||||| +|||+..+... ..+ ....|.+.
T Consensus 21 ~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGA--i~i~~~~~~~~~~~~~~~lp~~~~~~~~ 98 (302)
T 3olh_A 21 QSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGA--AFFDIDQCSDRTSPYDHMLPGAEHFAEY 98 (302)
T ss_dssp CCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTC--EECCTTTSSCSSCSSSSCCCCHHHHHHH
T ss_pred CCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCC--eEeCHHHhcCcCCCCCCCCCCHHHHHHH
Confidence 368999999999975 58999999 7899999999999 99988654211 112 23467788
Q ss_pred HHhh-ccCCCcEEEEeCC---CchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621 72 VRSL-CKEEDRLVVGCQS---GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 72 ~~~~-~~~~~~iv~~c~~---g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
+.++ ++++++||+||.+ +.+|.++++.|+.+||++|++|+||+.+|...|+|+++..
T Consensus 99 ~~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 159 (302)
T 3olh_A 99 AGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSGK 159 (302)
T ss_dssp HHHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CCSC
T ss_pred HHHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcccCC
Confidence 8777 7899999999963 4579999999999999999999999999999999998764
No 36
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.88 E-value=1.3e-22 Score=147.11 Aligned_cols=102 Identities=20% Similarity=0.267 Sum_probs=87.3
Q ss_pred CceeeeCHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh--ccCCCcEEEEe
Q 032621 10 AEVITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGC 86 (137)
Q Consensus 10 ~~~~~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~iv~~c 86 (137)
.....|+++++.++++++ .+|||||++.||..|||||| +|+|+..+ .++..++... .+++++||+||
T Consensus 119 ~~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey~~GHIpGA--iniP~~~~--------~~~~~~l~~~l~~~kdk~IVvyC 188 (265)
T 4f67_A 119 NAGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNA--INPDIENF--------REFPDYVQRNLIDKKDKKIAMFC 188 (265)
T ss_dssp CTTCEECHHHHHHHTTCTTSEEEECSCHHHHHHEEETTC--BCCCCSSG--------GGHHHHHHHHTGGGTTSCEEEEC
T ss_pred CCCceECHHHHHHHhcCCCeEEEEeCCchHhhcCcCCCC--EeCCHHHH--------HhhHHHHHHhhhhCCCCeEEEEe
Confidence 346799999999999864 89999999999999999999 99998633 2344444322 37889999999
Q ss_pred CCCchHHHHHHHHHHCCccceeeccccHHHHHhCC
Q 032621 87 QSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNG 121 (137)
Q Consensus 87 ~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~ 121 (137)
.+|.||..+++.|.+.||++|+.|+||+.+|.+..
T Consensus 189 ~~G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~ 223 (265)
T 4f67_A 189 TGGIRCEKTTAYMKELGFEHVYQLHDGILNYLESI 223 (265)
T ss_dssp SSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHS
T ss_pred CCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhc
Confidence 99999999999999999999999999999998764
No 37
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.88 E-value=1.6e-22 Score=147.32 Aligned_cols=115 Identities=15% Similarity=0.222 Sum_probs=95.1
Q ss_pred eeeCHHHHHHHhhC-CCEEEecCC-hHHHhccCCCCceeeCccccccCC---CCCC-CChHHHHHHHhh-ccCCCcEEEE
Q 032621 13 ITVDVRAAKNLLES-GYGYLDVRT-AEEFKEGHVDAAKIFNIPYMFNTP---EGRV-KNPDFLKKVRSL-CKEEDRLVVG 85 (137)
Q Consensus 13 ~~is~~~~~~~~~~-~~~viDvR~-~~e~~~g~ipga~~inip~~~~~~---~~~~-~~~~~~~~~~~~-~~~~~~iv~~ 85 (137)
..|+++++.+++++ +.+|||||+ +.||..|||||| +|+|+..+.. ...+ ....|.+.+.++ ++++++||+|
T Consensus 6 ~~is~~~l~~~l~~~~~~liDvR~~~~ey~~ghIpgA--~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvy 83 (277)
T 3aay_A 6 VLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGA--IKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILY 83 (277)
T ss_dssp HEECHHHHHTTTTCTTEEEEEEESSSHHHHHCBSTTC--EEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEEEE
T ss_pred ceEcHHHHHHHhCCCCEEEEEcCCChhhHhhCCCCCc--EEecccccccCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEE
Confidence 57999999998876 478999998 899999999999 9999864211 1112 223577777766 7889999999
Q ss_pred eCCCc-hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCC
Q 032621 86 CQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREK 129 (137)
Q Consensus 86 c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~ 129 (137)
|.+|. +|.++++.|+.+||++|++|+||+.+|.+.++|+++...
T Consensus 84 c~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 128 (277)
T 3aay_A 84 GGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPV 128 (277)
T ss_dssp CSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCCCC
T ss_pred CCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccccCCC
Confidence 99875 799999999999999999999999999999999987643
No 38
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.88 E-value=2.5e-22 Score=146.26 Aligned_cols=111 Identities=22% Similarity=0.361 Sum_probs=92.3
Q ss_pred eeCHHHHHHHhhCCCEEEecCChHHHhc----------------cCCCCceeeCcccccc-CCCCCCCC-hHHHHHHHhh
Q 032621 14 TVDVRAAKNLLESGYGYLDVRTAEEFKE----------------GHVDAAKIFNIPYMFN-TPEGRVKN-PDFLKKVRSL 75 (137)
Q Consensus 14 ~is~~~~~~~~~~~~~viDvR~~~e~~~----------------g~ipga~~inip~~~~-~~~~~~~~-~~~~~~~~~~ 75 (137)
.++++++.+.++++. |||||++.||.. |||||| +|+|+..+ ...+.+.. .++.+.+...
T Consensus 145 ~~~~~el~~~~~~~~-liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA--~~ip~~~~~~~~~~~~~~~~l~~~~~~~ 221 (277)
T 3aay_A 145 RAFRDEVLAAINVKN-LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGA--INVPWSRAANEDGTFKSDEELAKLYADA 221 (277)
T ss_dssp EECHHHHHHTTTTSE-EEECSCHHHHHTSCCC-----CCCCSCCSBCTTC--EECCGGGGBCTTSCBCCHHHHHHHHHHH
T ss_pred hcCHHHHHHhcCCCC-EEEeCChHHeeeeecccccccccccccCCcCCCc--eecCHHHhcCCCCcCCCHHHHHHHHHHc
Confidence 488999999887655 999999999985 999999 99998754 22333333 3455566554
Q ss_pred -ccCCCcEEEEeCCCchHHHHHHHHHH-CCccceeeccccHHHHHh-CCCceecC
Q 032621 76 -CKEEDRLVVGCQSGARSLHATADLLG-AGFKHVSNFGGGHMAWVQ-NGLKVKAR 127 (137)
Q Consensus 76 -~~~~~~iv~~c~~g~ra~~~~~~l~~-~G~~~v~~l~GG~~~w~~-~~~p~~~~ 127 (137)
++++++||+||++|.||..+++.|.+ +||++|++|+||+.+|.+ .++|++++
T Consensus 222 ~~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 276 (277)
T 3aay_A 222 GLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELG 276 (277)
T ss_dssp TCCTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCC
T ss_pred CCCCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCccC
Confidence 68899999999999999999999996 999999999999999998 89998763
No 39
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.88 E-value=2.9e-22 Score=137.29 Aligned_cols=107 Identities=14% Similarity=0.224 Sum_probs=85.7
Q ss_pred CCceeeeCHHHHHHHhhC-------CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHH-HHh--hc--
Q 032621 9 GAEVITVDVRAAKNLLES-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKK-VRS--LC-- 76 (137)
Q Consensus 9 ~~~~~~is~~~~~~~~~~-------~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~-~~~--~~-- 76 (137)
...++.|+++++.+++++ +.+|||||++.||..|||||| +|||+. ++... +.. ++
T Consensus 20 ~~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgA--inip~~-----------~l~~~~~~~~~~~~~ 86 (175)
T 2a2k_A 20 HQDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTA--VNLPLE-----------RDAESFLLKSPIAPC 86 (175)
T ss_dssp STTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTC--EECCSH-----------HHHHHHHHSSCCCC-
T ss_pred CCCCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCc--EECChh-----------HHHHHhhhhhhhccc
Confidence 345789999999999975 478999999999999999999 999995 33332 222 12
Q ss_pred cCCCcEEE--EeC-CCchHHHHHHHHHH----------CCccceeeccccHHHHHhCCCceecCC
Q 032621 77 KEEDRLVV--GCQ-SGARSLHATADLLG----------AGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 77 ~~~~~iv~--~c~-~g~ra~~~~~~l~~----------~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
+++++||+ ||+ +|.||..++..|++ +||++|++|+||+.+|.+.+.|+..+.
T Consensus 87 ~~~~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~~~ 151 (175)
T 2a2k_A 87 SLDKRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEPQ 151 (175)
T ss_dssp ---CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEESS
T ss_pred cCCCCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccCCC
Confidence 36788754 699 89999999999985 599999999999999999999886643
No 40
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.88 E-value=7e-23 Score=149.74 Aligned_cols=115 Identities=20% Similarity=0.255 Sum_probs=95.5
Q ss_pred eeeeCHHHHHHHhhC-CCEEEecC-ChHHHhccCCCCceeeCcccccc-C-C-CCCCC-ChHHHHHHHhh-ccCCCcEEE
Q 032621 12 VITVDVRAAKNLLES-GYGYLDVR-TAEEFKEGHVDAAKIFNIPYMFN-T-P-EGRVK-NPDFLKKVRSL-CKEEDRLVV 84 (137)
Q Consensus 12 ~~~is~~~~~~~~~~-~~~viDvR-~~~e~~~g~ipga~~inip~~~~-~-~-~~~~~-~~~~~~~~~~~-~~~~~~iv~ 84 (137)
...|+++++.+++++ +.+||||| ++.+|..|||||| +|+|+... . + ...+. ...|.+.+..+ ++++++||+
T Consensus 7 ~~~is~~~l~~~l~~~~~~liDvR~~~~e~~~ghIpgA--~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ivv 84 (285)
T 1uar_A 7 EVLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGA--QKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVL 84 (285)
T ss_dssp GGEECHHHHHTTTTCTTEEEEEECSSTTHHHHCBCTTC--EEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEE
T ss_pred CceEcHHHHHHhcCCCCEEEEEcCCCcchhhcCcCCCC--EECCchhhccCCcccCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 358999999999876 48899999 7899999999999 99998631 1 1 11222 23577777776 789999999
Q ss_pred EeCCCc-hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621 85 GCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 85 ~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
||++|. +|..+++.|+.+||++|++|+||+.+|...++|+.+..
T Consensus 85 yc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~ 129 (285)
T 1uar_A 85 YGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEV 129 (285)
T ss_dssp ECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCC
T ss_pred ECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccCCC
Confidence 999988 79999999999999999999999999999999998754
No 41
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.88 E-value=5.5e-22 Score=140.17 Aligned_cols=105 Identities=17% Similarity=0.270 Sum_probs=83.2
Q ss_pred CceeeeCHHHHHHHhhCC-------CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh----ccC
Q 032621 10 AEVITVDVRAAKNLLESG-------YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL----CKE 78 (137)
Q Consensus 10 ~~~~~is~~~~~~~~~~~-------~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~----~~~ 78 (137)
..++.|+++++.++++.+ ++|||||++.||..|||||| +|||+. ..+.+.+... .++
T Consensus 54 ~~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGA--inIP~~----------~~l~~~l~~~~~~~~~~ 121 (216)
T 3op3_A 54 QDLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGA--LNLYSQ----------EELFNFFLKKPIVPLDT 121 (216)
T ss_dssp SSSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTC--EECCSH----------HHHHHHHTSSCCCCSST
T ss_pred CCCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCC--EECChH----------HHHHHHHhhcccccccc
Confidence 457899999999999763 68999999999999999999 999995 1233444221 123
Q ss_pred CCc--EEEEeC-CCchHHHHHHHHHHC----------CccceeeccccHHHHHhCCCceec
Q 032621 79 EDR--LVVGCQ-SGARSLHATADLLGA----------GFKHVSNFGGGHMAWVQNGLKVKA 126 (137)
Q Consensus 79 ~~~--iv~~c~-~g~ra~~~~~~l~~~----------G~~~v~~l~GG~~~w~~~~~p~~~ 126 (137)
+++ ||+||. +|.||..++..|+.. ||++|++|+||+.+|.+....+-.
T Consensus 122 ~k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~lce 182 (216)
T 3op3_A 122 QKRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYMELCE 182 (216)
T ss_dssp TSEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEE
T ss_pred CCCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCccccc
Confidence 444 999999 999999999999876 899999999999999887654444
No 42
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.87 E-value=2.9e-22 Score=151.82 Aligned_cols=113 Identities=18% Similarity=0.163 Sum_probs=95.1
Q ss_pred eeeeCHHHHHHHhhCCCEEEecCC--------hHHHhccCCCCceeeCccccc-cCCC-------CCCC-ChHHHHHHHh
Q 032621 12 VITVDVRAAKNLLESGYGYLDVRT--------AEEFKEGHVDAAKIFNIPYMF-NTPE-------GRVK-NPDFLKKVRS 74 (137)
Q Consensus 12 ~~~is~~~~~~~~~~~~~viDvR~--------~~e~~~g~ipga~~inip~~~-~~~~-------~~~~-~~~~~~~~~~ 74 (137)
...|+++++.+++++ .+|||||+ +.||..|||||| +|+|+.. +... ..+. ..+|.+.+..
T Consensus 13 ~~~Is~~el~~~l~~-~~iIDvR~~~~~~~~~~~ey~~gHIpGA--i~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~ 89 (373)
T 1okg_A 13 KVFLDPSEVADHLAE-YRIVDCRYSLKIKDHGSIQYAKEHVKSA--IRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMA 89 (373)
T ss_dssp CCEECHHHHTTCGGG-SEEEECCCCSSSTTTTTTHHHHCEETTC--EECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHH
T ss_pred CcEEcHHHHHHHcCC-cEEEEecCCccccccchhHHhhCcCCCC--EEeCchhhhhcccccCCccccCCCHHHHHHHHHH
Confidence 579999999999887 89999998 699999999999 9999874 4221 2222 2467777766
Q ss_pred h-ccCCCcEEEEe-CCCchHH-HHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621 75 L-CKEEDRLVVGC-QSGARSL-HATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 75 ~-~~~~~~iv~~c-~~g~ra~-~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
. ++++++||+|| .+|.++. ++++.|+.+|| +|++|+||+.+|.+.++|+++..
T Consensus 90 ~gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~~~~ 145 (373)
T 1okg_A 90 NGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGE 145 (373)
T ss_dssp TTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSC
T ss_pred cCCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcccCC
Confidence 6 78999999999 6788876 99999999999 99999999999999999998763
No 43
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.87 E-value=1.2e-22 Score=136.32 Aligned_cols=113 Identities=19% Similarity=0.162 Sum_probs=82.0
Q ss_pred eeeCHHHHHHHhhC---CCEEEecCChHHHhccCCCCceeeCccccccC-C---CCCCCChHHH-HHH-Hhh-ccCCCcE
Q 032621 13 ITVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNT-P---EGRVKNPDFL-KKV-RSL-CKEEDRL 82 (137)
Q Consensus 13 ~~is~~~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~~-~---~~~~~~~~~~-~~~-~~~-~~~~~~i 82 (137)
+.|+++++.+++++ +.+|||||++.||..|||||| +|||+..+. . .+.+....+. ... ... ++++++|
T Consensus 4 ~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgA--inip~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~i 81 (153)
T 2vsw_A 4 TQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEA--ININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQKV 81 (153)
T ss_dssp EEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTC--EECCCCHHHHHHHHTTSSCHHHHHHHSCSSCCCCCTTSEE
T ss_pred ccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCC--eeeChHHHHHhhhhcCCcCHHHhcCchhhhhhccCCCCeE
Confidence 68999999999973 488999999999999999999 999986320 0 0000000110 000 011 3678899
Q ss_pred EEEeCCCchHHHH------HHHHHH--CCccceeeccccHHHHHhCCCceecC
Q 032621 83 VVGCQSGARSLHA------TADLLG--AGFKHVSNFGGGHMAWVQNGLKVKAR 127 (137)
Q Consensus 83 v~~c~~g~ra~~~------~~~l~~--~G~~~v~~l~GG~~~w~~~~~p~~~~ 127 (137)
|+||++|.++..+ ++.|.. .||++|++|+||+.+|.+.+.++.+.
T Consensus 82 Vvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~~~~ 134 (153)
T 2vsw_A 82 VVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLCEG 134 (153)
T ss_dssp EEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGGEEC
T ss_pred EEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhhhcC
Confidence 9999999887665 566763 49999999999999999887666554
No 44
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.87 E-value=3.3e-22 Score=134.32 Aligned_cols=107 Identities=20% Similarity=0.260 Sum_probs=81.6
Q ss_pred CceeeeCHHHHHHHhhC-----CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCC-cE
Q 032621 10 AEVITVDVRAAKNLLES-----GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEED-RL 82 (137)
Q Consensus 10 ~~~~~is~~~~~~~~~~-----~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~i 82 (137)
..+..|+++++.+++++ +.+|||||++ ||..|||||| +|||+..+. ......+... ..+++ .|
T Consensus 2 ~~~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGA--inip~~~l~-------~~~~~~l~~~l~~~~~~~v 71 (152)
T 2j6p_A 2 TNYTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNS--INMPTISCT-------EEMYEKLAKTLFEEKKELA 71 (152)
T ss_dssp -CCEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTC--EECCTTTCC-------HHHHHHHHHHHHHTTCCEE
T ss_pred CCcCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCc--EECChhHhh-------HHHHHHHHHHhcccCCCEE
Confidence 35689999999999976 5899999999 9999999999 999986321 1112223222 12444 47
Q ss_pred EEEe-CCCchHHHHH----HHHHHCCc--cceeeccccHHHHHhCCCceec
Q 032621 83 VVGC-QSGARSLHAT----ADLLGAGF--KHVSNFGGGHMAWVQNGLKVKA 126 (137)
Q Consensus 83 v~~c-~~g~ra~~~~----~~l~~~G~--~~v~~l~GG~~~w~~~~~p~~~ 126 (137)
|+|| .+|.|+..++ +.|.+.|| .+|++|+||+.+|.+.+.++..
T Consensus 72 V~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~~ 122 (152)
T 2j6p_A 72 VFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRP 122 (152)
T ss_dssp EEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTCG
T ss_pred EEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCCC
Confidence 7779 7899998888 67788997 5899999999999988877654
No 45
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.87 E-value=5.1e-22 Score=141.34 Aligned_cols=99 Identities=28% Similarity=0.370 Sum_probs=83.7
Q ss_pred eeeCHHHHHHHhhCCCEEEecCChHHHhc----------cCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCc
Q 032621 13 ITVDVRAAKNLLESGYGYLDVRTAEEFKE----------GHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDR 81 (137)
Q Consensus 13 ~~is~~~~~~~~~~~~~viDvR~~~e~~~----------g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 81 (137)
..++++++.+ +.+|||||++.||.. |||||| +|+|+..+.... + .+... ++++++
T Consensus 121 ~~i~~~e~~~----~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA--~~ip~~~~~~~~-----e---~~~~~~~~~~~~ 186 (230)
T 2eg4_A 121 WLLTADEAAR----HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGS--KNAPLELFLSPE-----G---LLERLGLQPGQE 186 (230)
T ss_dssp GBCCHHHHHT----CSCEEECSCHHHHTTSCCCTTSSSCCBCTTC--EECCGGGGGCCT-----T---HHHHHTCCTTCE
T ss_pred ceeCHHHHhh----CCeEEeCCCHHHcCcccCCCCCccCCCCCCc--EEcCHHHhCChH-----H---HHHhcCCCCCCC
Confidence 4688888876 688999999999999 999999 999997553211 1 12222 578999
Q ss_pred EEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 032621 82 LVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 126 (137)
Q Consensus 82 iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~ 126 (137)
||+||++|.||..++..|+.+| .+|++|+||+.+|.+.++|+++
T Consensus 187 iv~~C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~~ 230 (230)
T 2eg4_A 187 VGVYCHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTEP 230 (230)
T ss_dssp EEEECSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCBC
T ss_pred EEEEcCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCCC
Confidence 9999999999999999999999 8999999999999999999863
No 46
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.86 E-value=4.4e-22 Score=154.65 Aligned_cols=102 Identities=29% Similarity=0.486 Sum_probs=90.3
Q ss_pred ceeeeCHHHHHHHhhC-CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCC
Q 032621 11 EVITVDVRAAKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG 89 (137)
Q Consensus 11 ~~~~is~~~~~~~~~~-~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g 89 (137)
..+.++++++.+.+++ +.+|||+|++.||..|||||| +|+|+. ++...+.. ++++++||+||++|
T Consensus 372 ~~~~i~~~~l~~~~~~~~~~lvDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~vvv~C~~G 437 (474)
T 3tp9_A 372 SYANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQA--HHIPLS-----------KLAAHIHD-VPRDGSVCVYCRTG 437 (474)
T ss_dssp CCEEECHHHHHHTTTTTCCEEEECSCHHHHHHCBCTTC--EECCHH-----------HHTTTGGG-SCSSSCEEEECSSS
T ss_pred cccccCHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCC--EECCHH-----------HHHHHHhc-CCCCCEEEEECCCC
Confidence 3578999999999875 489999999999999999999 999995 44444443 48899999999999
Q ss_pred chHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 032621 90 ARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 126 (137)
Q Consensus 90 ~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~ 126 (137)
.||..++..|+..||++|++|+||+.+|.+.++|+++
T Consensus 438 ~ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~~ 474 (474)
T 3tp9_A 438 GRSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA 474 (474)
T ss_dssp HHHHHHHHHHHHHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred HHHHHHHHHHHHcCCCCEEEecChHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999864
No 47
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.86 E-value=9.9e-22 Score=129.67 Aligned_cols=109 Identities=17% Similarity=0.167 Sum_probs=77.9
Q ss_pred eeCHHHHHH--------HhhC-CCEEEecCChHHHhccCCCCceeeCccccccCCC-----CCCCChHHHHHHHhh--c-
Q 032621 14 TVDVRAAKN--------LLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPE-----GRVKNPDFLKKVRSL--C- 76 (137)
Q Consensus 14 ~is~~~~~~--------~~~~-~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~-----~~~~~~~~~~~~~~~--~- 76 (137)
.|+++++.+ .+++ +.+|||||++.||..|||||| +|+|+..+... ... .+...+... .
T Consensus 2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA--~~ip~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 76 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGA--VHINCADKISRRRLQQGKI---TVLDLISCREGKD 76 (142)
T ss_dssp EECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTC--EECCCSSHHHHHHHHTTSS---CHHHHHHTTSCTT
T ss_pred ccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCc--cccCccHHHHHHHhhcCCc---chhhhCCChhhhH
Confidence 689999998 5444 489999999999999999999 99998632100 111 001111000 0
Q ss_pred ----cCCCcEEEEeCCCchH---------HHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621 77 ----KEEDRLVVGCQSGARS---------LHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 77 ----~~~~~iv~~c~~g~ra---------~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
.++++||+||++|.++ ..++..|...|| +|++|+||+.+|.+.+.++.++.
T Consensus 77 ~~~~~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~~~~ 140 (142)
T 2ouc_A 77 SFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLCDNS 140 (142)
T ss_dssp HHHHHHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGEEEC
T ss_pred HHhccCCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhhccc
Confidence 0268899999999875 457778899999 89999999999999999887654
No 48
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.86 E-value=1.8e-21 Score=149.46 Aligned_cols=115 Identities=23% Similarity=0.361 Sum_probs=94.4
Q ss_pred eeeCHHHHHHHhhCC-CEEEecCChHHH-----------hccCCCCceeeCcccc-------c-cCCCCCCCCh-HHHHH
Q 032621 13 ITVDVRAAKNLLESG-YGYLDVRTAEEF-----------KEGHVDAAKIFNIPYM-------F-NTPEGRVKNP-DFLKK 71 (137)
Q Consensus 13 ~~is~~~~~~~~~~~-~~viDvR~~~e~-----------~~g~ipga~~inip~~-------~-~~~~~~~~~~-~~~~~ 71 (137)
..|+++++.+.++.+ .+|||||++.|| ..|||||| +|+|+. . +++.+.+... ++.+.
T Consensus 272 ~~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgA--i~ip~~~~~~~~~~~~~~~~~~~~~~~l~~~ 349 (423)
T 2wlr_A 272 LMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGA--RWGHAGSDSTHMEDFHNPDGTMRSADDITAM 349 (423)
T ss_dssp GEECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTC--EECCCCSSTTCCGGGBCTTSSBCCHHHHHHH
T ss_pred heecHHHHHHHhcCCCceEEecCchhheeeeccCCCCCCcCCCCCCc--cccccccccccHHHHcCCCCcCCCHHHHHHH
Confidence 469999999988754 789999999999 78999999 888874 1 2333333333 45555
Q ss_pred HHhh-ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHh-CCCceecCCC
Q 032621 72 VRSL-CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ-NGLKVKAREK 129 (137)
Q Consensus 72 ~~~~-~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~-~~~p~~~~~~ 129 (137)
+... ++++++||+||++|.||..++..|..+||++|++|+||+.+|.+ .++|++++..
T Consensus 350 ~~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~~~ 409 (423)
T 2wlr_A 350 WKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGER 409 (423)
T ss_dssp HHTTTCCTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSCEECSSC
T ss_pred HHHcCCCCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCCcccCCC
Confidence 5433 68899999999999999999999999999999999999999998 7999998654
No 49
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.86 E-value=1.8e-21 Score=153.51 Aligned_cols=107 Identities=22% Similarity=0.300 Sum_probs=95.8
Q ss_pred CceeeeCHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCC
Q 032621 10 AEVITVDVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS 88 (137)
Q Consensus 10 ~~~~~is~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~ 88 (137)
.....|+++++.+.++.+ .+|||||++.||..|||||| +|+|.. ++...+..+ +++++||+||.+
T Consensus 374 ~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~l~~l-~~~~~ivv~C~s 439 (539)
T 1yt8_A 374 PRADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGA--AWVLRS-----------QLKQALERL-GTAERYVLTCGS 439 (539)
T ss_dssp CCCCEECHHHHHHHTTSTTEEEEECSCHHHHHHCBCTTC--EECCGG-----------GHHHHHHHH-CCCSEEEEECSS
T ss_pred CcCCccCHHHHHHHhcCCCeEEEEeCCHHHhhcCcCCCc--hhCCHH-----------HHHHHHHhC-CCCCeEEEEeCC
Confidence 456799999999999764 88999999999999999999 999885 666666654 889999999999
Q ss_pred CchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCCCC
Q 032621 89 GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKAREKP 130 (137)
Q Consensus 89 g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~~~ 130 (137)
|.||..++..|+..||++|++|+||+.+|.+.|+|++++..+
T Consensus 440 G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~~~~~ 481 (539)
T 1yt8_A 440 SLLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTEDGESL 481 (539)
T ss_dssp SHHHHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBCSSCC
T ss_pred ChHHHHHHHHHHHcCCCCEEEeCCcHHHHHhCCCCcccCCCC
Confidence 999999999999999999999999999999999999986543
No 50
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.85 E-value=1.8e-21 Score=149.54 Aligned_cols=114 Identities=15% Similarity=0.176 Sum_probs=96.1
Q ss_pred eeeCHHHHHHHhhC---------CCEEEecC--ChHHHhccCCCCceeeCccccccC--CCCCC-CChHHHHHHHhh-cc
Q 032621 13 ITVDVRAAKNLLES---------GYGYLDVR--TAEEFKEGHVDAAKIFNIPYMFNT--PEGRV-KNPDFLKKVRSL-CK 77 (137)
Q Consensus 13 ~~is~~~~~~~~~~---------~~~viDvR--~~~e~~~g~ipga~~inip~~~~~--~~~~~-~~~~~~~~~~~~-~~ 77 (137)
..++++++.++++. +.+|||+| ++.+|..|||||| +|+|+..+. +.+.+ +..++.+.+... ++
T Consensus 124 ~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA--~nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~ 201 (423)
T 2wlr_A 124 QLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGA--DYIDTNEVESEPLWNKVSDEQLKAMLAKHGIR 201 (423)
T ss_dssp GEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTC--EEEEGGGTEETTTTEECCHHHHHHHHHHTTCC
T ss_pred cccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCc--EEcCHHHhccCCCCCCCCHHHHHHHHHHcCCC
Confidence 57899999988862 47899999 9999999999999 999997652 22333 334556666555 68
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
++++||+||++|.||..+++.|+.+||++|++|+||+.+|...++|++++.
T Consensus 202 ~~~~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~g~ 252 (423)
T 2wlr_A 202 HDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGT 252 (423)
T ss_dssp TTSEEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBCSS
T ss_pred CCCeEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcccCC
Confidence 899999999999999999999999999999999999999999999998754
No 51
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.85 E-value=3.2e-22 Score=136.62 Aligned_cols=115 Identities=17% Similarity=0.237 Sum_probs=82.4
Q ss_pred CCCceeeeCHHHHHHHhhCC--------CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-c--
Q 032621 8 SGAEVITVDVRAAKNLLESG--------YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-C-- 76 (137)
Q Consensus 8 ~~~~~~~is~~~~~~~~~~~--------~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~-- 76 (137)
....++.|+++++.++++.+ ++|||||+ .||..|||||| +|||+..+..... ..+++...+... +
T Consensus 26 ~~~~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGA--iniP~~~l~~~~~-~l~~l~~~~~~~~~~~ 101 (169)
T 3f4a_A 26 SITNVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDG--WHYAYSRLKQDPE-YLRELKHRLLEKQADG 101 (169)
T ss_dssp CCCSEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTC--EECCHHHHHHCHH-HHHHHHHHHHHHHHTS
T ss_pred ccCCCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCC--EECCHHHhhcccc-cHHHHHHHHHhhcccc
Confidence 34568899999999999753 78999999 89999999999 9999964311000 001111111111 1
Q ss_pred cCCCcEEEEeCCC-chHHHHHHHHHH----CC--ccceeeccccHHHHHhCCCceec
Q 032621 77 KEEDRLVVGCQSG-ARSLHATADLLG----AG--FKHVSNFGGGHMAWVQNGLKVKA 126 (137)
Q Consensus 77 ~~~~~iv~~c~~g-~ra~~~~~~l~~----~G--~~~v~~l~GG~~~w~~~~~p~~~ 126 (137)
..+++||+||.+| .|+..++.+|.+ .| +.+|++|+||+.+|.+.+.|.+.
T Consensus 102 ~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~~ 158 (169)
T 3f4a_A 102 RGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDES 158 (169)
T ss_dssp SSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCTT
T ss_pred cCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCccc
Confidence 1136899999987 799888877754 25 57899999999999998776544
No 52
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.84 E-value=2.5e-21 Score=129.87 Aligned_cols=110 Identities=15% Similarity=0.103 Sum_probs=81.6
Q ss_pred CCCCceeeeCHHHHHHHhhC---CCEEEecCChHHHhccCCCCceeeCccccccC------C----CCCCCChHHHHHHH
Q 032621 7 SSGAEVITVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNT------P----EGRVKNPDFLKKVR 73 (137)
Q Consensus 7 ~~~~~~~~is~~~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~~------~----~~~~~~~~~~~~~~ 73 (137)
+.......|+++++.+++++ +.+|||||++.||..|||||| +|||+..+. . ...+......+.+.
T Consensus 10 ~~~~~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgA--inip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 87 (154)
T 1hzm_A 10 FASEMAISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESA--INVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFT 87 (154)
T ss_dssp SSSCCSSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSC--CCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHHHH
T ss_pred cccccccccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCc--eEeCccHHHHhhhhcCcccHHHhCCCHHHHHHHh
Confidence 33445678999999998875 589999999999999999999 999986421 0 01222222334443
Q ss_pred hhccCCCcEEEEeCCCchH-------HHHHHHHHHC---CccceeeccccHHHHHhC
Q 032621 74 SLCKEEDRLVVGCQSGARS-------LHATADLLGA---GFKHVSNFGGGHMAWVQN 120 (137)
Q Consensus 74 ~~~~~~~~iv~~c~~g~ra-------~~~~~~l~~~---G~~~v~~l~GG~~~w~~~ 120 (137)
. ++++++||+||.+|.++ ..+++.|+.+ ||+ |++|+||+.+|.+.
T Consensus 88 ~-~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 88 R-RCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp H-STTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred c-cCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence 3 46788999999998765 4446666654 998 99999999999875
No 53
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.82 E-value=5.7e-20 Score=124.02 Aligned_cols=113 Identities=15% Similarity=0.142 Sum_probs=80.1
Q ss_pred CCCceeeeCHHHHHHHhhC---------CCEEEecCChHHHhccCCCCceeeCccccccC-----CCCCCCChHHHHHHH
Q 032621 8 SGAEVITVDVRAAKNLLES---------GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNT-----PEGRVKNPDFLKKVR 73 (137)
Q Consensus 8 ~~~~~~~is~~~~~~~~~~---------~~~viDvR~~~e~~~g~ipga~~inip~~~~~-----~~~~~~~~~~~~~~~ 73 (137)
....+..|+++++.++++. +.+|||||++.||..|||||| +|+|+..+. ....+. ....+.
T Consensus 6 ~~~~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga--~~i~~~~l~~~~~~~~~~~~---~~~~~~ 80 (158)
T 3tg1_B 6 QLASIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGA--VHINCADKISRRRLQQGKIT---VLDLIS 80 (158)
T ss_dssp -----CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTC--EECCCSSHHHHHHHTTSSCC---HHHHTC
T ss_pred CCCCCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCc--eeechhHHHHHhhhhcCccc---HHhhcC
Confidence 3456789999999999973 489999999999999999999 999986421 000110 000000
Q ss_pred h-----h--ccCCCcEEEEeCCC---------chHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 032621 74 S-----L--CKEEDRLVVGCQSG---------ARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 126 (137)
Q Consensus 74 ~-----~--~~~~~~iv~~c~~g---------~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~ 126 (137)
. . ..++++||+||.+| .+|..++..|...|| +|++|+||+.+|.+..-.+..
T Consensus 81 ~~~~~~~~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~~p~~~~ 148 (158)
T 3tg1_B 81 CREGKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLCD 148 (158)
T ss_dssp CCCSSCSSTTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSSCGGGBC
T ss_pred CHHHHHHHhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHHhhhhcc
Confidence 0 0 12478999999999 459999999999999 599999999999766544333
No 54
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.82 E-value=1.1e-20 Score=149.87 Aligned_cols=97 Identities=27% Similarity=0.431 Sum_probs=85.8
Q ss_pred CceeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCC
Q 032621 10 AEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG 89 (137)
Q Consensus 10 ~~~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g 89 (137)
..++.|+++++.++++++.+|||||++.||..|||||| +|+|+. ++.+.+.. ++++++||+||++|
T Consensus 486 ~~~~~i~~~~~~~~~~~~~~~iDvR~~~e~~~ghi~ga--~~ip~~-----------~l~~~~~~-l~~~~~iv~~C~~g 551 (588)
T 3ics_A 486 GFVDTVQWHEIDRIVENGGYLIDVREPNELKQGMIKGS--INIPLD-----------ELRDRLEE-VPVDKDIYITCQLG 551 (588)
T ss_dssp TSCCEECTTTHHHHHHTTCEEEECSCGGGGGGCBCTTE--EECCHH-----------HHTTCGGG-SCSSSCEEEECSSS
T ss_pred cccceecHHHHHHHhcCCCEEEEcCCHHHHhcCCCCCC--EECCHH-----------HHHHHHhh-CCCCCeEEEECCCC
Confidence 44678999999999988899999999999999999999 999995 44444444 47899999999999
Q ss_pred chHHHHHHHHHHCCccceeeccccHHHHHhCC
Q 032621 90 ARSLHATADLLGAGFKHVSNFGGGHMAWVQNG 121 (137)
Q Consensus 90 ~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~ 121 (137)
.||..+++.|++.||+ |++|+||+.+|.+..
T Consensus 552 ~rs~~a~~~l~~~G~~-v~~l~GG~~~w~~~~ 582 (588)
T 3ics_A 552 MRGYVAARMLMEKGYK-VKNVDGGFKLYGTVL 582 (588)
T ss_dssp HHHHHHHHHHHHTTCC-EEEETTHHHHHHHHC
T ss_pred cHHHHHHHHHHHcCCc-EEEEcchHHHHHhhh
Confidence 9999999999999999 999999999998753
No 55
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.81 E-value=3.5e-19 Score=120.04 Aligned_cols=121 Identities=11% Similarity=0.117 Sum_probs=82.0
Q ss_pred CCCCCCceeeeCHHHHHHHhhC---CCEEEecCChHHHhccCCCCceeeCccccccCCCC-------CCCChHHHHHHHh
Q 032621 5 GKSSGAEVITVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEG-------RVKNPDFLKKVRS 74 (137)
Q Consensus 5 ~~~~~~~~~~is~~~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~-------~~~~~~~~~~~~~ 74 (137)
.....+....|+++++.++++. +.+|||||++.||..|||||| +|||+..+.... .+. ......+..
T Consensus 7 ~~~~~~~~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~ga--inip~~~~~~~~~~~~l~~~lp-~~~~~~~~~ 83 (157)
T 1whb_A 7 GKCETKEKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHS--LSVPEEAISPGVTASWIEAHLP-DDSKDTWKK 83 (157)
T ss_dssp CCCCCCCCSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTC--EEECSSSCCTTCCHHHHHHSCC-TTHHHHHHG
T ss_pred CCcccccCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCC--cccCHHHccCCCcHHHHHHHCC-hHHHHHHHh
Confidence 3445677889999999999874 478999999999999999999 999986542211 111 111111111
Q ss_pred hccCCCcEEEEeCCCch----HHHHHHHHHH----C----Ccc-ceeeccccHHHHHhCCCceecCCCC
Q 032621 75 LCKEEDRLVVGCQSGAR----SLHATADLLG----A----GFK-HVSNFGGGHMAWVQNGLKVKAREKP 130 (137)
Q Consensus 75 ~~~~~~~iv~~c~~g~r----a~~~~~~l~~----~----G~~-~v~~l~GG~~~w~~~~~p~~~~~~~ 130 (137)
....+.||+||.+|.+ +..+++.|.+ . |+. +|++|+||+.+|.+. +|.......
T Consensus 84 -~~~~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~~~ 150 (157)
T 1whb_A 84 -RGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTNAK 150 (157)
T ss_dssp -GGTSSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBSCCC
T ss_pred -cCCCCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhCCCC
Confidence 1233458999987753 3455666652 2 444 399999999999885 777665443
No 56
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.81 E-value=1.2e-20 Score=148.78 Aligned_cols=95 Identities=22% Similarity=0.380 Sum_probs=81.1
Q ss_pred ceeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCc
Q 032621 11 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 90 (137)
Q Consensus 11 ~~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ 90 (137)
.++.|+++++.++ ..+.+|||||++.||..+||||| +|+|+. ++.+.+.. ++++++||+||++|.
T Consensus 471 ~~~~i~~~~~~~~-~~~~~~iDvR~~~e~~~~~i~ga--~~ip~~-----------~l~~~~~~-~~~~~~iv~~c~~g~ 535 (565)
T 3ntd_A 471 DATPIHFDQIDNL-SEDQLLLDVRNPGELQNGGLEGA--VNIPVD-----------ELRDRMHE-LPKDKEIIIFSQVGL 535 (565)
T ss_dssp SCCEECTTTTTSC-CTTEEEEECSCGGGGGGCCCTTC--EECCGG-----------GTTTSGGG-SCTTSEEEEECSSSH
T ss_pred ccceeeHHHHHhC-CCCcEEEEeCCHHHHhcCCCCCc--EECCHH-----------HHHHHHhh-cCCcCeEEEEeCCch
Confidence 3467888888777 55689999999999999999999 999996 33333333 478999999999999
Q ss_pred hHHHHHHHHHHCCccceeeccccHHHHHhCC
Q 032621 91 RSLHATADLLGAGFKHVSNFGGGHMAWVQNG 121 (137)
Q Consensus 91 ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~ 121 (137)
||..+++.|++.|| +|++|+||+.+|.+.|
T Consensus 536 rs~~a~~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 536 RGNVAYRQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp HHHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred HHHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence 99999999999999 8999999999998764
No 57
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.80 E-value=4.6e-19 Score=132.07 Aligned_cols=118 Identities=15% Similarity=0.091 Sum_probs=92.8
Q ss_pred CCCceeeeCHHHHHHHhhCC----CEEEecC---------ChHHH-hccCCCCceeeCcccccc-CCC----CCC-CChH
Q 032621 8 SGAEVITVDVRAAKNLLESG----YGYLDVR---------TAEEF-KEGHVDAAKIFNIPYMFN-TPE----GRV-KNPD 67 (137)
Q Consensus 8 ~~~~~~~is~~~~~~~~~~~----~~viDvR---------~~~e~-~~g~ipga~~inip~~~~-~~~----~~~-~~~~ 67 (137)
+++.++.||++++.++++++ +++||++ ...|| ++||||||.+++ ++.+ ++. ..+ +...
T Consensus 23 sm~~~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~D--ld~~~d~~~~~ph~LP~~~~ 100 (327)
T 3utn_X 23 SMPLFDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFD--IDAISDKKSPYPHMFPTKKV 100 (327)
T ss_dssp -CCSCEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECC--TTTSSCTTSSSTTCCCCHHH
T ss_pred cCccccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeC--hHHhcCCCCCCCCCCcCHHH
Confidence 45666799999999999753 6789986 24566 679999995444 4433 111 223 3457
Q ss_pred HHHHHHhh-ccCCCcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccHHHHHhCCCceecCC
Q 032621 68 FLKKVRSL-CKEEDRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 68 ~~~~~~~~-~~~~~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
|.+.+.++ +.+++.||+|++.|. .|+++||.|+.+|+++|++|+|| .+|.++|+|++++.
T Consensus 101 f~~~l~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~~~ 162 (327)
T 3utn_X 101 FDDAMSNLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDSSK 162 (327)
T ss_dssp HHHHHHHTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBCCC
T ss_pred HHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcccCC
Confidence 88888888 999999999998765 79999999999999999999977 89999999998754
No 58
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.80 E-value=6.2e-20 Score=139.05 Aligned_cols=101 Identities=19% Similarity=0.331 Sum_probs=79.0
Q ss_pred hCCCEEEecCChHHHh-----------ccCCCCceeeCccccccC---CCCC-CCC-hHHHHHHHhh---ccC---CCcE
Q 032621 25 ESGYGYLDVRTAEEFK-----------EGHVDAAKIFNIPYMFNT---PEGR-VKN-PDFLKKVRSL---CKE---EDRL 82 (137)
Q Consensus 25 ~~~~~viDvR~~~e~~-----------~g~ipga~~inip~~~~~---~~~~-~~~-~~~~~~~~~~---~~~---~~~i 82 (137)
..+.+|||||++.||. .|||||| +|||+..+. ..+. +.. .++.+.+... +++ +++|
T Consensus 172 ~~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGA--iniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~i 249 (373)
T 1okg_A 172 PPQAIITDARSADRFASTVRPYAADKMPGHIEGA--RNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSF 249 (373)
T ss_dssp CTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTC--EECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTS
T ss_pred ccCceEEeCCCHHHccccccccccCCcCccCCCc--EEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCCCE
Confidence 3458899999999999 9999999 999997653 2222 222 3344444432 367 8999
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHh-CCCceecC
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQ-NGLKVKAR 127 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~-~~~p~~~~ 127 (137)
|+||++|.||..++..|..+||++|++|+||+.+|.+ .++|++++
T Consensus 250 vvyC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~ 295 (373)
T 1okg_A 250 VFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS 295 (373)
T ss_dssp EEECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred EEECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCcccC
Confidence 9999999999999999999999999999999999987 57886543
No 59
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.9e-18 Score=128.70 Aligned_cols=109 Identities=21% Similarity=0.383 Sum_probs=85.5
Q ss_pred eeeCHHHHHHHhhCC-----CEEEecCChHHHh-----------ccCCCCceeeCcccccc-CCCCCCC--C-hHHHHHH
Q 032621 13 ITVDVRAAKNLLESG-----YGYLDVRTAEEFK-----------EGHVDAAKIFNIPYMFN-TPEGRVK--N-PDFLKKV 72 (137)
Q Consensus 13 ~~is~~~~~~~~~~~-----~~viDvR~~~e~~-----------~g~ipga~~inip~~~~-~~~~~~~--~-~~~~~~~ 72 (137)
..++.+++++.++++ .+|||+|++.+|. .|||||| +|+|+..+ ++.+... . ..+...+
T Consensus 184 ~v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA--~nlP~~~~ld~~~~~~~~~~e~l~~~l 261 (327)
T 3utn_X 184 EIVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGT--QPLPYGSLLDPETKTYPEAGEAIHATL 261 (327)
T ss_dssp HEECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTE--EECCGGGGSCTTTCCCCCTTHHHHHHH
T ss_pred heecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCC--cccChhhccCCCCCCCCCcHHHHHHHH
Confidence 368899999988763 6899999999995 4999999 99999776 3333322 1 1122222
Q ss_pred ----Hhh---ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCc
Q 032621 73 ----RSL---CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLK 123 (137)
Q Consensus 73 ----~~~---~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p 123 (137)
... ++++++||+||++|.+|+..+..|..+||++|.+++|+|..|.+...|
T Consensus 262 ~~~~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~p 319 (327)
T 3utn_X 262 EKALKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSGP 319 (327)
T ss_dssp HHHHHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHCG
T ss_pred HHHHHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccCC
Confidence 221 678899999999999999999999999999999999999999876444
No 60
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.78 E-value=3.7e-19 Score=138.24 Aligned_cols=104 Identities=18% Similarity=0.239 Sum_probs=90.8
Q ss_pred CCceeeeCHHHHHHHhhCCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCC
Q 032621 9 GAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQS 88 (137)
Q Consensus 9 ~~~~~~is~~~~~~~~~~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~ 88 (137)
.+.++.|+++++.+.++++ +|||+|++.+|..|||||| +|+|+. ..|.+++.++.+++++||+||..
T Consensus 269 ~~~~~~is~~~l~~~l~~~-~iiD~R~~~~y~~ghIpGA--~~i~~~----------~~~~~~~~~l~~~~~~vvvy~~~ 335 (474)
T 3tp9_A 269 APERVDLPPERVRAWREGG-VVLDVRPADAFAKRHLAGS--LNIPWN----------KSFVTWAGWLLPADRPIHLLAAD 335 (474)
T ss_dssp CCEECCCCGGGHHHHHHTS-EEEECSCHHHHHHSEETTC--EECCSS----------TTHHHHHHHHCCSSSCEEEECCT
T ss_pred cCCCceeCHHHHHHHhCCC-EEEECCChHHHhccCCCCe--EEECcc----------hHHHHHHHhcCCCCCeEEEEECC
Confidence 3457789999999999887 9999999999999999999 999985 35777777777788999999998
Q ss_pred CchHHHHHHHHHHCCccceeeccccHHHHHhCCCceec
Q 032621 89 GARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVKA 126 (137)
Q Consensus 89 g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~~ 126 (137)
|. +.++++.|+.+||++|+.+.+|+.+|...+.++..
T Consensus 336 ~~-~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~ 372 (474)
T 3tp9_A 336 AI-APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVAS 372 (474)
T ss_dssp TT-HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEEC
T ss_pred Cc-HHHHHHHHHHcCCcceEEecCcHHHHHhccccccc
Confidence 76 66699999999999999866699999988887765
No 61
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.76 E-value=1.7e-18 Score=123.09 Aligned_cols=93 Identities=15% Similarity=0.114 Sum_probs=72.4
Q ss_pred CCEEEecCChHHHhccCCCCceeeCcccc--ccCCCC---CC-CChHHHHHHHhhccCCCcEEEEeCCCc-hHHHHHHHH
Q 032621 27 GYGYLDVRTAEEFKEGHVDAAKIFNIPYM--FNTPEG---RV-KNPDFLKKVRSLCKEEDRLVVGCQSGA-RSLHATADL 99 (137)
Q Consensus 27 ~~~viDvR~~~e~~~g~ipga~~inip~~--~~~~~~---~~-~~~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~~~~l 99 (137)
+.+|||+|++.||..|||||| +|+|+. .+.... .+ ....|.+.+..+ ..+++||+||.+|. +|..+++.|
T Consensus 6 ~~~iiDvR~~~ey~~ghIpgA--i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~ivvyc~~g~~~s~~a~~~L 82 (230)
T 2eg4_A 6 DAVLVDTRPRPAYEAGHLPGA--RHLDLSAPKLRLREEAELKALEGGLTELFQTL-GLRSPVVLYDEGLTSRLCRTAFFL 82 (230)
T ss_dssp TCEEEECSCHHHHHHCBCTTC--EECCCCSCCCCCCSHHHHHHHHHHHHHHHHHT-TCCSSEEEECSSSCHHHHHHHHHH
T ss_pred CEEEEECCChhhHhhCcCCCC--EECCccchhcccCCCCCcCCCHHHHHHHHHhc-CCCCEEEEEcCCCCccHHHHHHHH
Confidence 489999999999999999999 999986 322100 00 012455555554 45889999999998 999999999
Q ss_pred HHCCccceeeccccHHHHHhCCCceecCC
Q 032621 100 LGAGFKHVSNFGGGHMAWVQNGLKVKARE 128 (137)
Q Consensus 100 ~~~G~~~v~~l~GG~~~w~~~~~p~~~~~ 128 (137)
. +||++|++|+|| |.+ +|+++..
T Consensus 83 ~-~G~~~v~~l~GG---W~~--~p~~~~~ 105 (230)
T 2eg4_A 83 G-LGGLEVQLWTEG---WEP--YATEKEE 105 (230)
T ss_dssp H-HTTCCEEEECSS---CGG--GCCBCSC
T ss_pred H-cCCceEEEeCCC---Ccc--CcccCCC
Confidence 9 999999999999 977 7876543
No 62
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.76 E-value=3.8e-18 Score=115.02 Aligned_cols=115 Identities=10% Similarity=0.051 Sum_probs=75.1
Q ss_pred CCCceeeeCHHHHHHHhhC---CCEEEecCChHHHhccCCCCceeeCccccccCCCCC------CCChHHHHHHHhhccC
Q 032621 8 SGAEVITVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGR------VKNPDFLKKVRSLCKE 78 (137)
Q Consensus 8 ~~~~~~~is~~~~~~~~~~---~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~------~~~~~~~~~~~~~~~~ 78 (137)
.......|+++++.+++++ +.+|||||++.||..|||||| +|||+..+..... ..+ +....+.....+
T Consensus 15 ~~~~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gA--inip~~~l~~~~~~~~l~~~lp-~~~~~l~~~~~~ 91 (157)
T 2gwf_A 15 VPRGSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHS--LSVPEEAISPGVTASWIEAHLP-DDSKDTWKKRGN 91 (157)
T ss_dssp ----CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTC--EECCGGGCCTTCCHHHHHHTSC-HHHHHHHHTTTT
T ss_pred ccCCCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCC--cccCHHHcCCCCcHHHHHHHcC-HHHHHHHHhcCC
Confidence 3455678999999999874 479999999999999999999 9999875532210 001 111122111123
Q ss_pred CCcEEEEeCCCch----HHHHHHHHH----HC----Ccc-ceeeccccHHHHHhCCCceec
Q 032621 79 EDRLVVGCQSGAR----SLHATADLL----GA----GFK-HVSNFGGGHMAWVQNGLKVKA 126 (137)
Q Consensus 79 ~~~iv~~c~~g~r----a~~~~~~l~----~~----G~~-~v~~l~GG~~~w~~~~~p~~~ 126 (137)
.+.||+||.+|.+ +..+++.|. +. |+. +|++|+||+.+|.+. +|...
T Consensus 92 ~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~ 151 (157)
T 2gwf_A 92 VEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYT 151 (157)
T ss_dssp SSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGGGB
T ss_pred CCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-Chhhc
Confidence 3458999987753 344455544 32 344 399999999999874 66554
No 63
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.74 E-value=1.2e-19 Score=140.83 Aligned_cols=86 Identities=27% Similarity=0.370 Sum_probs=0.0
Q ss_pred HHHHhhC-CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchHHHHHHH
Q 032621 20 AKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATAD 98 (137)
Q Consensus 20 ~~~~~~~-~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~ 98 (137)
+.+.+++ +.+|||||++.||..|||||| +|+|+. ++.+.+.. ++++++||+||++|.||..++..
T Consensus 379 ~~~~~~~~~~~liDvR~~~e~~~ghIpgA--~~ip~~-----------~l~~~~~~-l~~~~~iv~~C~~G~rs~~a~~~ 444 (466)
T 3r2u_A 379 HSEDITGNESHILDVRNDNEWNNGHLSQA--VHVPHG-----------KLLETDLP-FNKNDVIYVHCQSGIRSSIAIGI 444 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhCCCcEEEEeCCHHHHhcCcCCCC--EECCHH-----------HHHHHHhh-CCCCCeEEEECCCChHHHHHHHH
Confidence 3344443 378999999999999999999 999995 34444444 47889999999999999999999
Q ss_pred HHHCCccceeeccccHHHHHh
Q 032621 99 LLGAGFKHVSNFGGGHMAWVQ 119 (137)
Q Consensus 99 l~~~G~~~v~~l~GG~~~w~~ 119 (137)
|+..||++|++|+||+.+|.+
T Consensus 445 L~~~G~~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 445 LEHKGYHNIINVNEGYKDIQL 465 (466)
T ss_dssp ---------------------
T ss_pred HHHcCCCCEEEecChHHHHhh
Confidence 999999999999999999965
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.50 E-value=3.1e-14 Score=110.51 Aligned_cols=80 Identities=18% Similarity=0.258 Sum_probs=66.0
Q ss_pred CCCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCcc
Q 032621 26 SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFK 105 (137)
Q Consensus 26 ~~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~ 105 (137)
.+.+|||+|++.+|..|||||| +|+|+. ..|..++.+.++++++||+||. +.++.++++.|+.+||+
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpGA--v~ip~~----------~~~~~~~~~~~~~~~~vvly~~-~~~a~~a~~~L~~~G~~ 361 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEGT--INIPYD----------KNFINQIGWYLNYDQEINLIGD-YHLVSKATHTLQLIGYD 361 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTTC--EECCSS----------TTHHHHHTTTCCTTSCEEEESC-HHHHHHHHHHHHTTTCC
T ss_pred CCeEEEECCCHHHHhhCCCCCc--EECCcc----------HHHHHHHHhccCCCCeEEEEEC-CchHHHHHHHhhhhhcc
Confidence 3479999999999999999999 999985 3677788777788999999999 55899999999999999
Q ss_pred ceee-ccccHHHHH
Q 032621 106 HVSN-FGGGHMAWV 118 (137)
Q Consensus 106 ~v~~-l~GG~~~w~ 118 (137)
+|+. ++|+...|.
T Consensus 362 ~v~~~l~g~~~~~~ 375 (466)
T 3r2u_A 362 DIAGYQLPQSKIQT 375 (466)
T ss_dssp CEEEEECCC-----
T ss_pred cccccccCcccccH
Confidence 9986 677655543
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=98.25 E-value=2.3e-06 Score=56.93 Aligned_cols=85 Identities=16% Similarity=0.203 Sum_probs=52.8
Q ss_pred eeCHHHHHHHhhCC-CEEEecCChHH------------Hhcc-CCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccC
Q 032621 14 TVDVRAAKNLLESG-YGYLDVRTAEE------------FKEG-HVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKE 78 (137)
Q Consensus 14 ~is~~~~~~~~~~~-~~viDvR~~~e------------~~~g-~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~ 78 (137)
.++++++..+.+.+ ..|||+|+..| +..+ +|.|. +++|+... .+.. +....+... -..
T Consensus 29 ~~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~--~~iPv~~~----~~~~-~~~~~~~~~l~~~ 101 (156)
T 2f46_A 29 QLTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGF--HHQPVTAR----DIQK-HDVETFRQLIGQA 101 (156)
T ss_dssp CCCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEE--EECCCCTT----TCCH-HHHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhh--eECccCCC----CCCH-HHHHHHHHHHHhC
Confidence 45777877776666 68999997655 2233 47655 89998532 2222 222222222 235
Q ss_pred CCcEEEEeCCCchHHHHHHH-HHHCCcc
Q 032621 79 EDRLVVGCQSGARSLHATAD-LLGAGFK 105 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~~~~-l~~~G~~ 105 (137)
+.+|+++|.+|.|+..++.. +...|++
T Consensus 102 ~~pVlvHC~sG~Rs~~l~al~l~~~g~~ 129 (156)
T 2f46_A 102 EYPVLAYCRTGTRCSLLWGFRRAAEGMP 129 (156)
T ss_dssp CSSEEEECSSSHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHcCCC
Confidence 78999999999988755443 2445654
No 66
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=97.29 E-value=0.0005 Score=44.63 Aligned_cols=90 Identities=13% Similarity=0.096 Sum_probs=52.1
Q ss_pred CHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCc-hHH
Q 032621 16 DVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA-RSL 93 (137)
Q Consensus 16 s~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~-ra~ 93 (137)
+.+++..+.+.+ ..|||+|+..+......+|-.+.++|+........-.-..+.+.+......+.+|+++|..|. |+.
T Consensus 24 ~~~~~~~L~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~~Rsg 103 (150)
T 4erc_A 24 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTG 103 (150)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTSCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHH
T ss_pred CHHHHHHHHHCCCCEEEEcCCCCCCcccccCCceEEEEecCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH
Confidence 356665555556 679999987665545556667778887533111100001233333333456789999999997 776
Q ss_pred HH-HHHH-HHCCcc
Q 032621 94 HA-TADL-LGAGFK 105 (137)
Q Consensus 94 ~~-~~~l-~~~G~~ 105 (137)
.+ +.+| ...|++
T Consensus 104 ~~~a~~l~~~~~~~ 117 (150)
T 4erc_A 104 TMLACYLVKERGLA 117 (150)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCC
Confidence 44 3333 336663
No 67
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=96.83 E-value=0.0021 Score=41.56 Aligned_cols=87 Identities=14% Similarity=0.120 Sum_probs=49.1
Q ss_pred CHHHHHHHhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChH---HHHHHHhhccCCCcEEEEeCCCc-
Q 032621 16 DVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPD---FLKKVRSLCKEEDRLVVGCQSGA- 90 (137)
Q Consensus 16 s~~~~~~~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~---~~~~~~~~~~~~~~iv~~c~~g~- 90 (137)
+.+++..+.+.+ ..|||+|+..++....+++..+.++|+..... ..... +.+.+......+.+|+++|..|.
T Consensus 25 ~~~~~~~l~~~gi~~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~~~---p~~~~~~~~~~~i~~~~~~~~~vlVHC~aG~~ 101 (151)
T 2img_A 25 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCP---PAPDQIDRFVQIVDEANARGEAVGVHCALGFG 101 (151)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTCC---CCHHHHHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cHHHHHHHHHCCCCEEEECCCCCCCCHHHHhhCCeEEEeCCCCCC---CCHHHHHHHHHHHHHHHhCCCcEEEECCCCCC
Confidence 344444444456 67999998766544445555567777643211 11122 33333332346789999999886
Q ss_pred hHHHHH-HHHHHC-Ccc
Q 032621 91 RSLHAT-ADLLGA-GFK 105 (137)
Q Consensus 91 ra~~~~-~~l~~~-G~~ 105 (137)
|+..++ ..|... |++
T Consensus 102 Rsg~~~~~~l~~~~~~~ 118 (151)
T 2img_A 102 RTGTMLACYLVKERGLA 118 (151)
T ss_dssp HHHHHHHHHHHHHHCCC
T ss_pred hHHHHHHHHHHHHhCcC
Confidence 765553 344433 653
No 68
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=96.39 E-value=0.032 Score=40.66 Aligned_cols=44 Identities=18% Similarity=0.230 Sum_probs=31.6
Q ss_pred eeeCHHHHHHHhhCC-CEEEecCChHHHhcc----CCCCceeeCccccc
Q 032621 13 ITVDVRAAKNLLESG-YGYLDVRTAEEFKEG----HVDAAKIFNIPYMF 56 (137)
Q Consensus 13 ~~is~~~~~~~~~~~-~~viDvR~~~e~~~g----~ipga~~inip~~~ 56 (137)
..++.+++..+.+-+ ..|||.|+..|.... ..+|..++++|+..
T Consensus 54 ~~lt~~d~~~L~~lGI~tVIDLR~~~E~~~~~pd~~~~Gi~~~~iPi~~ 102 (296)
T 1ywf_A 54 SRLDDAGRATLRRLGITDVADLRSSREVARRGPGRVPDGIDVHLLPFPD 102 (296)
T ss_dssp TTCCHHHHHHHHHHTCCEEEECCCHHHHHHHCSCCCCTTCEEEECCCCC
T ss_pred ccCCHHHHHHHHhCCCCEEEECcChhhhhccCCCCCCCCCEEEEecCcc
Confidence 346788877666556 679999998885432 45688888888753
No 69
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=96.32 E-value=0.0066 Score=39.41 Aligned_cols=90 Identities=11% Similarity=0.107 Sum_probs=49.0
Q ss_pred CHHHHHHHhhCC-CEEEecCChHHHhcc----CCCCceeeCccccccC-CCCCCCChHHHHHHHhhc-cCCCcEEEEeCC
Q 032621 16 DVRAAKNLLESG-YGYLDVRTAEEFKEG----HVDAAKIFNIPYMFNT-PEGRVKNPDFLKKVRSLC-KEEDRLVVGCQS 88 (137)
Q Consensus 16 s~~~~~~~~~~~-~~viDvR~~~e~~~g----~ipga~~inip~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~iv~~c~~ 88 (137)
+..++..+.+.+ ..|||+|+..+.... .-.|-.++++|..... +...+..+.+.+.+.... ..+.+|+++|..
T Consensus 22 ~~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~gi~~~~ipi~d~~~~~~~~~~~~~~~~~~~i~~~~~~~vlvHC~a 101 (151)
T 1xri_A 22 DSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCKR 101 (151)
T ss_dssp CHHHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTCEEEECCCCCCCGGGCCCCHHHHHHHHHHHHCGGGCSEEEECSS
T ss_pred CccCHHHHHHCCCCEEEECCCCCcChhHHHHHHhcCCeEEecccccccCccccCCHHHHHHHHHHHHcCCCCCEEEECCC
Confidence 455554444446 689999976543210 0124456777774321 111222233434343332 256789999999
Q ss_pred Cc-hHHHHHH-HHHHCCcc
Q 032621 89 GA-RSLHATA-DLLGAGFK 105 (137)
Q Consensus 89 g~-ra~~~~~-~l~~~G~~ 105 (137)
|. |+..++. .|...|++
T Consensus 102 G~~RTg~~~a~~l~~~g~~ 120 (151)
T 1xri_A 102 GKHRTGCLVGCLRKLQKWC 120 (151)
T ss_dssp SSSHHHHHHHHHHHHTTBC
T ss_pred CCCHHHHHHHHHHHHhCCC
Confidence 97 7666654 44556764
No 70
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=95.93 E-value=0.04 Score=35.68 Aligned_cols=82 Identities=16% Similarity=0.107 Sum_probs=44.2
Q ss_pred HhhCC-CEEEecCChHHHhc---cCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH
Q 032621 23 LLESG-YGYLDVRTAEEFKE---GHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA 95 (137)
Q Consensus 23 ~~~~~-~~viDvR~~~e~~~---g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~ 95 (137)
+.+.+ ..|||+|+..|... ....|-.++++|..... ...+.. .+..+.+......+.+|+++|..|. |+..+
T Consensus 29 L~~~gI~~Vi~l~~~~e~~~~~~~~~~~~~~~~ip~~d~~-~~~l~~~~~~~~~~i~~~~~~~~~vlvHC~aG~~RS~~~ 107 (154)
T 2r0b_A 29 LQKHGITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNP-VENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAF 107 (154)
T ss_dssp HHHTTCCEEEEEECGGGTTTSSCCCTTTSEEEEEECCSST-TSCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHH
T ss_pred HHHcCCeEEEEeCCccccccCCCCCcCceeEEEEECCCCC-cccHHHHHHHHHHHHHHHHhcCCCEEEEcCCCCChHHHH
Confidence 33445 67999998765321 11234556677764321 111211 1122223222456789999999995 87753
Q ss_pred -HHH-HHHCCcc
Q 032621 96 -TAD-LLGAGFK 105 (137)
Q Consensus 96 -~~~-l~~~G~~ 105 (137)
+.+ +...|++
T Consensus 108 ~~ayl~~~~~~~ 119 (154)
T 2r0b_A 108 VIAYIMETFGMK 119 (154)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHcCCC
Confidence 333 3446653
No 71
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=95.80 E-value=0.011 Score=38.43 Aligned_cols=88 Identities=13% Similarity=0.065 Sum_probs=46.4
Q ss_pred HHHHHHhh-CC-CEEEecCChHHHhcc-------CCCCceeeCccccccCCCCCC-CChHHHHHHHhhccCCCcEEEEeC
Q 032621 18 RAAKNLLE-SG-YGYLDVRTAEEFKEG-------HVDAAKIFNIPYMFNTPEGRV-KNPDFLKKVRSLCKEEDRLVVGCQ 87 (137)
Q Consensus 18 ~~~~~~~~-~~-~~viDvR~~~e~~~g-------~ipga~~inip~~~~~~~~~~-~~~~~~~~~~~~~~~~~~iv~~c~ 87 (137)
.+..++++ .+ ..|||+|+..|.... ...|-.++++|.......... .-.++.+.+......+.+|+++|.
T Consensus 18 ~~~~~ll~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~gi~~~~~p~~d~~~~~~~~~~~~~~~~i~~~~~~~~~vlVHC~ 97 (157)
T 3rgo_A 18 NMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCK 97 (157)
T ss_dssp GGHHHHHHHSCEEEEEEESCCTTTTTSSCCHHHHHHTTCEEEEECCCTTTSSCCHHHHHHHHHHHHHHHHTTCEEEEESS
T ss_pred cchHHHHHHcCCCEEEECccccccccccCCHHHHHHCCCeEEEecCCCCCCCChHHHHHHHHHHHHHHHHCCCEEEEECC
Confidence 34445543 45 579999987554221 012445677777532111100 001222333333456789999999
Q ss_pred CCc-hHHHH-HHHH-HHCCcc
Q 032621 88 SGA-RSLHA-TADL-LGAGFK 105 (137)
Q Consensus 88 ~g~-ra~~~-~~~l-~~~G~~ 105 (137)
.|. |+..+ +.+| ...|++
T Consensus 98 ~G~~Rsg~~~~a~l~~~~~~~ 118 (157)
T 3rgo_A 98 AGRSRSATMVAAYLIQVHNWS 118 (157)
T ss_dssp SSSSHHHHHHHHHHHHHHTCC
T ss_pred CCCChHHHHHHHHHHHHcCCC
Confidence 998 87765 3343 445653
No 72
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=95.60 E-value=0.029 Score=36.73 Aligned_cols=79 Identities=14% Similarity=0.137 Sum_probs=42.9
Q ss_pred HhhCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH-HH
Q 032621 23 LLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA-TA 97 (137)
Q Consensus 23 ~~~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~~ 97 (137)
+.+.+ ..|||+|+..+. ...|-.++++|+...... .+.. .+..+.+......+.+|+++|..|. |+..+ +.
T Consensus 29 L~~~gI~~Vi~l~~~~~~---~~~~i~~~~ipi~D~~~~-~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~~~a 104 (160)
T 1yz4_A 29 LGRNKITHIISIHESPQP---LLQDITYLRIPVADTPEV-PIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTA 104 (160)
T ss_dssp HHHTTCCEEEEECSSCCC---CCTTCEEEEECCCSCTTS-CGGGGHHHHHHHHHHHHHTTCCEEEEETTSSSHHHHHHHH
T ss_pred HHHCCCeEEEEccCCCCC---ccCCCeEEEEECCCCCCc-cHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHHHHH
Confidence 33445 679999975432 234556677777432111 1110 1222333332446789999999995 87643 33
Q ss_pred H-HHHCCcc
Q 032621 98 D-LLGAGFK 105 (137)
Q Consensus 98 ~-l~~~G~~ 105 (137)
+ +...|++
T Consensus 105 ylm~~~~~~ 113 (160)
T 1yz4_A 105 YVMTVTGLG 113 (160)
T ss_dssp HHHHHHCCC
T ss_pred HHHHHcCCC
Confidence 3 3556653
No 73
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=95.45 E-value=0.022 Score=36.79 Aligned_cols=80 Identities=13% Similarity=0.102 Sum_probs=40.6
Q ss_pred hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH-HH-H
Q 032621 25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA-TA-D 98 (137)
Q Consensus 25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~~-~ 98 (137)
+.+ ..|||+|+..........|-.++++|+..... ..+.. .+..+.+......+.+|+++|..|. |+..+ +. .
T Consensus 27 ~~gi~~Vi~l~~e~p~~~~~~~~~~~~~ipi~D~~~-~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RSg~~~~ayl 105 (149)
T 1zzw_A 27 RLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNK-QNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYL 105 (149)
T ss_dssp HTTEEEEEECCSSSCCTTGGGTCSEEEECCCCCSSS-CCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHHH
T ss_pred HCCCcEEEEecCCCCCcccCCCCeEEEEEECCCCCc-ccHHHHHHHHHHHHHHHHHcCCeEEEECCCCCCHHHHHHHHHH
Confidence 445 57999997311100012244566777643211 11100 1122223322346789999999995 87664 33 3
Q ss_pred HHHCCcc
Q 032621 99 LLGAGFK 105 (137)
Q Consensus 99 l~~~G~~ 105 (137)
+...|++
T Consensus 106 ~~~~~~~ 112 (149)
T 1zzw_A 106 MKHTRMT 112 (149)
T ss_dssp HHHSCCC
T ss_pred HHHcCCC
Confidence 4456763
No 74
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=95.45 E-value=0.042 Score=37.24 Aligned_cols=77 Identities=12% Similarity=0.105 Sum_probs=42.6
Q ss_pred hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH--HHH
Q 032621 25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA--TAD 98 (137)
Q Consensus 25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~--~~~ 98 (137)
+.+ ..|||+|...+ ....+|-.++++|+...... .+.. ....+.+......+.+|+++|..|. |+..+ ++.
T Consensus 49 ~~gI~~Vi~l~~~~~--~~~~~gi~y~~ipi~D~~~~-~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSgtvv~ayL 125 (190)
T 2wgp_A 49 ARGITCIVNATIEIP--NFNWPQFEYVKVPLADMPHA-PIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYL 125 (190)
T ss_dssp HTTCCEEEECCSSSC--CCCCTTSEEEECCCCSSTTS-CGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHH
T ss_pred HCCCcEEEEecCCCC--CCCCCCCEEEEEEcccCCCC-CHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHH
Confidence 345 67999997432 22345666677777532111 1110 1222333333346788999999995 77643 344
Q ss_pred HHHCCc
Q 032621 99 LLGAGF 104 (137)
Q Consensus 99 l~~~G~ 104 (137)
+...|+
T Consensus 126 m~~~~~ 131 (190)
T 2wgp_A 126 MKFHNV 131 (190)
T ss_dssp HHHHCC
T ss_pred HHHcCC
Confidence 555665
No 75
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=95.34 E-value=0.047 Score=35.96 Aligned_cols=76 Identities=18% Similarity=0.258 Sum_probs=42.2
Q ss_pred hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH-HHHH
Q 032621 25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA-TADL 99 (137)
Q Consensus 25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~~~l 99 (137)
+.+ ..|||+|+..+- ...|-.++++|.... +...+.. .+..+.+......+.+|+++|..|. ||..+ +.+|
T Consensus 30 ~~gI~~Vi~l~~~~~~---~~~~i~~~~ip~~D~-~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSg~~~~ayL 105 (165)
T 1wrm_A 30 KNKVTHILSVHDSARP---MLEGVKYLCIPAADS-PSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYI 105 (165)
T ss_dssp HTTEEEEEECSTTCCC---CSTTCEEEECCCCSS-TTSCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHHH
T ss_pred HCCCcEEEEecCCCCC---CCCCCeEEEEECCCC-CCccHHHHHHHHHHHHHHHHHCCCeEEEECCCCCChhHHHHHHHH
Confidence 345 579999976432 234556677777432 1111211 1222233232356789999999995 87764 4444
Q ss_pred -HHCCc
Q 032621 100 -LGAGF 104 (137)
Q Consensus 100 -~~~G~ 104 (137)
...|+
T Consensus 106 m~~~~~ 111 (165)
T 1wrm_A 106 MTVTDF 111 (165)
T ss_dssp HHTSSC
T ss_pred HHHcCC
Confidence 44565
No 76
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=95.32 E-value=0.027 Score=37.05 Aligned_cols=78 Identities=12% Similarity=0.153 Sum_probs=42.8
Q ss_pred hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH--HHH
Q 032621 25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA--TAD 98 (137)
Q Consensus 25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~--~~~ 98 (137)
+.+ ..|||+|+..+. ....|-.++++|..... ...+.. .+..+.+......+.+|+++|..|. |+..+ +..
T Consensus 35 ~~gI~~Vi~l~~~~~~--~~~~~~~~~~ip~~D~~-~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~~~ayL 111 (164)
T 2hcm_A 35 RAGITLCVNVSRQQPG--PRAPGVAELRVPVFDDP-AEDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYL 111 (164)
T ss_dssp HTTEEEEEECSSSCCC--CCCTTCEEEECCCCSCT-TSCCHHHHHHHHHHHHHHHHTTCEEEEEESSSSHHHHHHHHHHH
T ss_pred HCCCeEEEEcCCCCCC--CCCCCCEEEEEeCcCCC-CchHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHHHHHHH
Confidence 345 579999985432 12345566777764321 111110 1222223222456789999999995 77644 344
Q ss_pred HHHCCcc
Q 032621 99 LLGAGFK 105 (137)
Q Consensus 99 l~~~G~~ 105 (137)
+...|++
T Consensus 112 m~~~~~~ 118 (164)
T 2hcm_A 112 MRHRGHS 118 (164)
T ss_dssp HHHSCCC
T ss_pred HHHhCCC
Confidence 5556763
No 77
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=95.29 E-value=0.055 Score=37.11 Aligned_cols=89 Identities=13% Similarity=0.092 Sum_probs=46.3
Q ss_pred HHHHHHHhhCC-CEEEecCChHHHhccCC---------CCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEe
Q 032621 17 VRAAKNLLESG-YGYLDVRTAEEFKEGHV---------DAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGC 86 (137)
Q Consensus 17 ~~~~~~~~~~~-~~viDvR~~~e~~~g~i---------pga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c 86 (137)
.+++..+.+.+ ..|||+|+..|...-.+ .|-.++++|+........-....+...+...+..+.+|+++|
T Consensus 61 ~~d~~~L~~~gi~~Vv~l~~~~E~~~~~~~~~~~~~~~~gi~~~~~pi~d~~~p~~~~~~~~~~~i~~~~~~~~~VlVHC 140 (212)
T 1fpz_A 61 QKDTEELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIASCCEIMEELTTCLKNYRKTLIHS 140 (212)
T ss_dssp HHHHHHHHHHTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTTCCCCHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCCEEEEcCCHHHHHhcCCccHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 34444444446 68999999866432111 234556677642211100000123333333344678999999
Q ss_pred CCCc-hHHHH-HHHHHHC--Ccc
Q 032621 87 QSGA-RSLHA-TADLLGA--GFK 105 (137)
Q Consensus 87 ~~g~-ra~~~-~~~l~~~--G~~ 105 (137)
..|. |+..+ +.+|... |++
T Consensus 141 ~aG~gRTg~~~a~~L~~~~~g~~ 163 (212)
T 1fpz_A 141 YGGLGRSCLVAACLLLYLSDTIS 163 (212)
T ss_dssp SSSSSHHHHHHHHHHHHHCSSCC
T ss_pred CCCCCHHHHHHHHHHHHhccCCC
Confidence 9987 65554 4445443 653
No 78
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=95.17 E-value=0.09 Score=33.59 Aligned_cols=79 Identities=18% Similarity=0.142 Sum_probs=41.9
Q ss_pred hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCC-ChHHHHHHHhhccCCCcEEEEeCCCc-hHHH-HHHHH-
Q 032621 25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK-NPDFLKKVRSLCKEEDRLVVGCQSGA-RSLH-ATADL- 99 (137)
Q Consensus 25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~-~~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~-~~~~l- 99 (137)
+.+ ..||+++.... .....+-.+.++|+.......... -.+..+.+......+.+|+++|..|. ||.. ++.+|
T Consensus 27 ~~gI~~Vi~l~~~~~--~~~~~~~~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~~~~aylm 104 (144)
T 3ezz_A 27 ALGITALLNVSSDCP--NHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLM 104 (144)
T ss_dssp HTTCCEEEECSSSCC--CTTTTTSEEEECCCCSSSSCCTTTTHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHHHHHHHH
T ss_pred HCCCeEEEEccCCCC--ccCCCCceEEEEEcccCCCCChHHHHHHHHHHHHHHHhcCCeEEEECCCCCChhHHHHHHHHH
Confidence 345 67999997422 111123355677775432211111 12333334333456789999999987 7653 33444
Q ss_pred HHCCcc
Q 032621 100 LGAGFK 105 (137)
Q Consensus 100 ~~~G~~ 105 (137)
...|++
T Consensus 105 ~~~~~~ 110 (144)
T 3ezz_A 105 MKKRVR 110 (144)
T ss_dssp HHHTCC
T ss_pred HHcCCC
Confidence 446653
No 79
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=94.83 E-value=0.08 Score=33.92 Aligned_cols=78 Identities=18% Similarity=0.163 Sum_probs=41.5
Q ss_pred HhhCC-CEEEecCChHHHhccCCC-CceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH--
Q 032621 23 LLESG-YGYLDVRTAEEFKEGHVD-AAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA-- 95 (137)
Q Consensus 23 ~~~~~-~~viDvR~~~e~~~g~ip-ga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~-- 95 (137)
+.+.+ ..|||+|+..+ ...| +-.+.++|.... +...+.. .+..+.+......+.+|+++|..|. ||..+
T Consensus 25 L~~~gi~~Vi~l~~~~~---~~~~~~~~~~~ipi~D~-~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~~v~ 100 (145)
T 2nt2_A 25 LQNRGVRYILNVTREID---NFFPGVFEYHNIRVYDE-EATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVI 100 (145)
T ss_dssp HHHTTEEEEEECCSSSC---CSCBTTBEEEECCCCSS-TTCCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHH
T ss_pred HHHCCCCEEEEeCCCCc---cCCCCCcEEEEEEEeCC-CCCcHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHHHH
Confidence 33446 57999997532 1122 335567776432 1122211 1222233332446789999999994 87543
Q ss_pred HHHHHHCCc
Q 032621 96 TADLLGAGF 104 (137)
Q Consensus 96 ~~~l~~~G~ 104 (137)
++.+...|+
T Consensus 101 ayLm~~~~~ 109 (145)
T 2nt2_A 101 AYAMKEYGW 109 (145)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHhCC
Confidence 344455665
No 80
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=94.61 E-value=0.11 Score=35.12 Aligned_cols=78 Identities=12% Similarity=0.160 Sum_probs=42.7
Q ss_pred hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH--HHH
Q 032621 25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA--TAD 98 (137)
Q Consensus 25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~--~~~ 98 (137)
+.+ ..||++|...+ ....+|-.++++|...... ..+.. .+..+.+......+.+|+++|..|. ||..+ +..
T Consensus 43 ~~gIt~Vi~l~~~~~--~~~~~~i~~~~ipi~D~~~-~~~~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRS~~vv~ayL 119 (188)
T 2esb_A 43 SNQITMVINVSVEVV--NTLYEDIQYMQVPVADSPN-SRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYL 119 (188)
T ss_dssp HTTCCEEEECCSSCC--CCCCTTCEEEECCCCSCTT-SCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHH
T ss_pred HCCCcEEEEecCCCC--CcCCCCCEEEEEeCcCCCC-ccHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHHHHHHH
Confidence 345 57999997432 2223455667777743211 11110 1222233332456789999999995 87643 344
Q ss_pred HHHCCcc
Q 032621 99 LLGAGFK 105 (137)
Q Consensus 99 l~~~G~~ 105 (137)
+...|++
T Consensus 120 m~~~~~s 126 (188)
T 2esb_A 120 MKYHAMS 126 (188)
T ss_dssp HHHSCCC
T ss_pred HHHcCCC
Confidence 4556763
No 81
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=94.41 E-value=0.059 Score=34.73 Aligned_cols=80 Identities=13% Similarity=0.062 Sum_probs=41.1
Q ss_pred hCC-CEEEecCChHHHhccC---CCCceeeCccccccCCCCCCCC--hHHHHHHHhhcc-CCCcEEEEeCCCc-hHH-HH
Q 032621 25 ESG-YGYLDVRTAEEFKEGH---VDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCK-EEDRLVVGCQSGA-RSL-HA 95 (137)
Q Consensus 25 ~~~-~~viDvR~~~e~~~g~---ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~iv~~c~~g~-ra~-~~ 95 (137)
+.+ ..|||+|+..+..... ..|-.++++|.... +...+.. .+..+.+...+. .+.+|+++|..|. |+. .+
T Consensus 25 ~~gi~~Vi~l~~~~~~~~~~~~~~~~i~~~~ip~~d~-~~~~l~~~~~~~~~~i~~~~~~~~~~vlVHC~aG~~RSg~~~ 103 (151)
T 2e0t_A 25 RLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDS-PAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLV 103 (151)
T ss_dssp HHTCCEEEETTCCTTCCSCTTHHHHTCEEEECCCCSS-TTSCTHHHHHHHHHHHHHHHHSTTCCEEEECSSSSHHHHHHH
T ss_pred HcCCCEEEEccCCcccCCccccCCCCeEEEEEecccC-CCccHHHHHHHHHHHHHHHHhcCCCcEEEECCCCCChHHHHH
Confidence 335 5799999764310000 12345567776432 1111110 122223323233 6789999999995 776 33
Q ss_pred HH-HHHHCCcc
Q 032621 96 TA-DLLGAGFK 105 (137)
Q Consensus 96 ~~-~l~~~G~~ 105 (137)
+. .+...|++
T Consensus 104 ~ayl~~~~~~~ 114 (151)
T 2e0t_A 104 LAYLMLYHHLT 114 (151)
T ss_dssp HHHHHHHSCCC
T ss_pred HHHHHHHcCCC
Confidence 33 44556764
No 82
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=94.22 E-value=0.11 Score=33.25 Aligned_cols=78 Identities=12% Similarity=0.112 Sum_probs=41.1
Q ss_pred hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCC--ChHHHHHHHhhccCCCcEEEEeCCCc-hHHHH-HHHH
Q 032621 25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK--NPDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA-TADL 99 (137)
Q Consensus 25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~--~~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~~~l 99 (137)
+.+ ..||+++...+ .....+-.+.++|+...... .+. -.+..+.+......+.+|+++|..|. ||..+ +.+|
T Consensus 27 ~~gI~~Vl~l~~~~~--~~~~~~~~~~~ipi~D~~~~-~~~~~~~~~~~fi~~~~~~~~~VlVHC~~G~sRS~~~v~ayL 103 (144)
T 3s4e_A 27 KNKVTHILNVAYGVE--NAFLSDFTYKSISILDLPET-NILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFL 103 (144)
T ss_dssp HTTCCEEEECSSSCC--CCCTTTSEEEECCCCCCTTS-CGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHH
T ss_pred HcCCCEEEEccCCCC--CCCCCCCEEEEEeccCCCCC-chHHHHHHHHHHHHHHHHcCCeEEEEcCCCCchHHHHHHHHH
Confidence 345 67999987322 22223445567776533211 111 01222333333456788999999987 76443 3444
Q ss_pred -HHCCcc
Q 032621 100 -LGAGFK 105 (137)
Q Consensus 100 -~~~G~~ 105 (137)
...|++
T Consensus 104 m~~~~~~ 110 (144)
T 3s4e_A 104 MNSEQTS 110 (144)
T ss_dssp HHHHCCC
T ss_pred HHHcCCC
Confidence 446653
No 83
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=94.11 E-value=0.077 Score=35.35 Aligned_cols=80 Identities=15% Similarity=0.111 Sum_probs=42.1
Q ss_pred CC-CEEEecCChHHHhc-------cCCCCceeeCccccccCCCCCCC-ChHHHHHHHhhccC-CCcEEEEeCCCc-hHHH
Q 032621 26 SG-YGYLDVRTAEEFKE-------GHVDAAKIFNIPYMFNTPEGRVK-NPDFLKKVRSLCKE-EDRLVVGCQSGA-RSLH 94 (137)
Q Consensus 26 ~~-~~viDvR~~~e~~~-------g~ipga~~inip~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~iv~~c~~g~-ra~~ 94 (137)
.+ ..||++|...++.. -.-.|-.+.++|........... -.+..+.+...... +.+|+++|..|. |+..
T Consensus 52 ~gI~~Vi~l~~~~~~~~~~~~~~~~~~~gi~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~~~~~~VlVHC~~G~~RSg~ 131 (183)
T 3f81_A 52 LGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPT 131 (183)
T ss_dssp HTCCEEEETTBSSSTTSBCCCTGGGTTTTCEEEECCCCCSTTSCGGGGHHHHHHHHHHHHHSTTCCEEEECSSSSSHHHH
T ss_pred CCCcEEEECCCCccccccccchhhcccCCCEEEEEEcCCCCcccHHHHHHHHHHHHHHHHHcCCCeEEEECCCCcchHHH
Confidence 45 67999997655221 00123355667764332111100 01233333333334 789999999997 7766
Q ss_pred -HHHHH-HHCCcc
Q 032621 95 -ATADL-LGAGFK 105 (137)
Q Consensus 95 -~~~~l-~~~G~~ 105 (137)
++.+| ...|++
T Consensus 132 ~v~ayLm~~~~~~ 144 (183)
T 3f81_A 132 LVIAYLMMRQKMD 144 (183)
T ss_dssp HHHHHHHHHHCCC
T ss_pred HHHHHHHHHhCCC
Confidence 44444 456763
No 84
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=94.11 E-value=0.07 Score=35.59 Aligned_cols=79 Identities=15% Similarity=0.128 Sum_probs=40.6
Q ss_pred hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHH---HHHHHhhccCCCcEEEEeCCCc-hHHHH-HHH
Q 032621 25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDF---LKKVRSLCKEEDRLVVGCQSGA-RSLHA-TAD 98 (137)
Q Consensus 25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~---~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~~~ 98 (137)
+.+ ..|||+|+..........|-.++++|+..... ..+. ..| .+.+......+.+|+++|..|. ||..+ +.+
T Consensus 31 ~~gI~~Vi~l~~e~p~~~~~~~~i~~~~ipi~D~~~-~~l~-~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~v~ay 108 (177)
T 2oud_A 31 RLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNK-QNLR-QYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAY 108 (177)
T ss_dssp HTTEEEEEECCSSSCCTTTTTTCSEEEECCCCCCSS-CCCH-HHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHH
T ss_pred HCCCcEEEEecCCCCcccccCCCceEEEEECCCCCc-ccHH-HHHHHHHHHHHHHHhcCCcEEEEcCCCCCchHHHHHHH
Confidence 345 57999997321100112344566777643211 1111 122 2223322346789999999995 77664 334
Q ss_pred H-HHCCcc
Q 032621 99 L-LGAGFK 105 (137)
Q Consensus 99 l-~~~G~~ 105 (137)
| ...|++
T Consensus 109 Lm~~~~~~ 116 (177)
T 2oud_A 109 LMKHTRMT 116 (177)
T ss_dssp HHHTSCCC
T ss_pred HHHHcCCC
Confidence 4 446763
No 85
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=93.81 E-value=0.19 Score=32.56 Aligned_cols=88 Identities=16% Similarity=0.175 Sum_probs=45.3
Q ss_pred eCHHHHHHHhhC-C-CEEEecCCh----HHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhc--------cCCC
Q 032621 15 VDVRAAKNLLES-G-YGYLDVRTA----EEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC--------KEED 80 (137)
Q Consensus 15 is~~~~~~~~~~-~-~~viDvR~~----~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 80 (137)
-+.++..+.+.+ + ..|||++.. ..+... |-.+.++|+........-....|...+.... .++.
T Consensus 34 ~t~~~~~~~l~~~gi~~Iv~l~~~~~~~~~~~~~---~i~~~~~p~~d~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 110 (167)
T 3s4o_A 34 SNLPTYIKELQHRGVRHLVRVCGPTYDATLVKSR---GIDVHSWPFDDGAPPTRAVLDSWLKLLDTELARQQEDPSVPPP 110 (167)
T ss_dssp GGHHHHHHHHHTTTEEEEEECSCCCSCTHHHHTT---TCEEEECCCCTTCCCCHHHHHHHHHHHHHHHHHHHHCTTCCCC
T ss_pred hhHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHC---CCeEEEeccCCCCCCCHHHHHHHHHHHHHHHHHHhhccccCCC
Confidence 355666666655 4 579999975 122222 2345667764221111000012333333221 3378
Q ss_pred cEEEEeCCCc-hHHHH-HHHHHHC-Ccc
Q 032621 81 RLVVGCQSGA-RSLHA-TADLLGA-GFK 105 (137)
Q Consensus 81 ~iv~~c~~g~-ra~~~-~~~l~~~-G~~ 105 (137)
+|+++|..|. |+..+ +..|... |++
T Consensus 111 ~vlVHC~aG~~RTg~~~a~~L~~~~~~~ 138 (167)
T 3s4o_A 111 TIGVHCVAGLGRAPILVALALVEYGNVS 138 (167)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHHTTCCC
T ss_pred cEEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence 9999999886 65444 4455554 653
No 86
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=93.76 E-value=0.23 Score=33.37 Aligned_cols=88 Identities=18% Similarity=0.250 Sum_probs=47.0
Q ss_pred eCHHHHHHHhhC-C-CEEEecCChHH----HhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh--ccCCCcEEEEe
Q 032621 15 VDVRAAKNLLES-G-YGYLDVRTAEE----FKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGC 86 (137)
Q Consensus 15 is~~~~~~~~~~-~-~~viDvR~~~e----~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~iv~~c 86 (137)
-+.++..+.+.+ + ..||+++...+ +..-+| .++++|+....+...-...++...+... ..++.+|++.|
T Consensus 48 ~t~~~~~~~L~~~gi~~Iv~l~~~~~~~~~~~~~~i---~~~~~pi~d~~~~~~~~~~~~~~~i~~~~~~~~~~~VlVHC 124 (189)
T 3rz2_A 48 ATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI---HVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHC 124 (189)
T ss_dssp TTHHHHHHHHHTTTEEEEEECSCCCSCCHHHHHSSC---EEEECCCCSSSCCCSHHHHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred ccHHHHHHHHHHcCCcEEEEeCCCcCCHHHHHHcCc---EEEEecCCCCCCCCHHHHHHHHHHHHHHHHhCCCCcEEEEC
Confidence 356667677665 4 57999997532 222233 4566675322111110011333333322 25678999999
Q ss_pred CCCc-hHHHH-HHHHHHCCcc
Q 032621 87 QSGA-RSLHA-TADLLGAGFK 105 (137)
Q Consensus 87 ~~g~-ra~~~-~~~l~~~G~~ 105 (137)
..|. |+..+ +..|...|++
T Consensus 125 ~aG~gRSg~~va~~L~~~g~~ 145 (189)
T 3rz2_A 125 VAGLGRAPVLVALALIEGGMK 145 (189)
T ss_dssp SSSSTTHHHHHHHHHHTTTCC
T ss_pred CCCCCHHHHHHHHHHHHcCCC
Confidence 9886 65544 4455555653
No 87
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=93.72 E-value=0.19 Score=34.73 Aligned_cols=76 Identities=13% Similarity=0.143 Sum_probs=40.6
Q ss_pred CC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH--HHHH
Q 032621 26 SG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA--TADL 99 (137)
Q Consensus 26 ~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~--~~~l 99 (137)
.+ ..||+++.... ...-.|-.+.++|+...... .+.. .+..+.+......+.+|+++|..|. |+..+ ++.+
T Consensus 30 ~GIt~VInl~~e~~--~~~~~gi~y~~ipi~D~~~~-~l~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRSgtvv~AYLm 106 (211)
T 2g6z_A 30 LHITALLNVSRRTS--EACMTHLHYKWIPVEDSHTA-DISSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLM 106 (211)
T ss_dssp HTCCEEEECSSCCC--CTTCTTSEEEECCCCSSTTS-CCGGGHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCCc--cccccCCEEEEeeCCCCCCC-CHHHHHHHHHHHHHHHHhcCCeEEEECCCCCCcHHHHHHHHHH
Confidence 35 57999997422 11113445677777532211 1111 1223333333456789999999995 77643 3444
Q ss_pred HHCCc
Q 032621 100 LGAGF 104 (137)
Q Consensus 100 ~~~G~ 104 (137)
+..|+
T Consensus 107 ~~~g~ 111 (211)
T 2g6z_A 107 KTKQF 111 (211)
T ss_dssp HHHCC
T ss_pred HHcCC
Confidence 54565
No 88
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=93.67 E-value=0.13 Score=33.31 Aligned_cols=74 Identities=18% Similarity=0.151 Sum_probs=38.6
Q ss_pred HHHHHHHhhCC-CEEEecCChHHHhcc-----------CCCCceeeCccccccCCCCCCCChH---HHHHHHhhccCCCc
Q 032621 17 VRAAKNLLESG-YGYLDVRTAEEFKEG-----------HVDAAKIFNIPYMFNTPEGRVKNPD---FLKKVRSLCKEEDR 81 (137)
Q Consensus 17 ~~~~~~~~~~~-~~viDvR~~~e~~~g-----------~ipga~~inip~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 81 (137)
.+++..+.+.+ ..|||+|+..|.... .-.|-.++++|+.... ...... +...+.... ...
T Consensus 18 ~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~~~~~gi~~~~~p~~d~~---~p~~~~~~~~~~~i~~~~--~~~ 92 (161)
T 2i6j_A 18 ENEILEWRKEGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHIPIPDGG---VPSDSQFLTIMKWLLSEK--EGN 92 (161)
T ss_dssp HHHHHHHHHHTCCEEEECSCHHHHHHHHSCHHHHHHHHHHTTCEEEECCCCTTC---CCCHHHHHHHHHHHHHCC--TTE
T ss_pred HHHHHHHHHCCCCEEEEcCchhhhhhhccchhhHHHHHHHcCceEEEecCCCCC---CCChHHHHHHHHHHHHhC--CCC
Confidence 34455444446 679999998664321 1234456677753221 111122 333333322 223
Q ss_pred EEEEeCCCc-hHHHHH
Q 032621 82 LVVGCQSGA-RSLHAT 96 (137)
Q Consensus 82 iv~~c~~g~-ra~~~~ 96 (137)
+++|..|. |+..++
T Consensus 93 -lVHC~aG~~Rtg~~~ 107 (161)
T 2i6j_A 93 -LVHCVGGIGRTGTIL 107 (161)
T ss_dssp -EEECSSSSHHHHHHH
T ss_pred -EEECCCCCCHHHHHH
Confidence 99999985 765543
No 89
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=92.76 E-value=0.16 Score=34.20 Aligned_cols=74 Identities=12% Similarity=0.170 Sum_probs=37.4
Q ss_pred CEEEecCChHHHhccCCCCceeeCccccccCCCCCCC--ChHHHHHHHhhccCCCcEEEEeCCCc-hHHHH-HHHH-HHC
Q 032621 28 YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK--NPDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA-TADL-LGA 102 (137)
Q Consensus 28 ~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~--~~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~~~l-~~~ 102 (137)
..||+++.........+++-.+.++|+... ..+. -.+..+.+.+....+..|+++|..|. ||..+ +.+| +..
T Consensus 67 t~Vlnv~~e~~~~~~~~~~i~y~~ip~~d~---~~i~~~~~~~~~fI~~~~~~g~~VLVHC~~G~sRS~tvv~ayLm~~~ 143 (182)
T 2j16_A 67 DVVINVAEEANDLRMQVPAVEYHHYRWEHD---SQIALDLPSLTSIIHAATTKREKILIHAQCGLSRSATLIIAYIMKYH 143 (182)
T ss_dssp SEEEECCSCC--------CCEEEECCCSSG---GGGGGGHHHHHHHHHHHHHTTCCEEEEESSCCSHHHHHHHHHHHHHT
T ss_pred CEEEEecCCCCCchhccCCceEEEEecCCC---chHHHHHHHHHHHHHHHHhcCCeEEEECCCCCChHHHHHHHHHHHHc
Confidence 468888864332222344556677776421 1111 01233333333456789999999986 76554 3344 445
Q ss_pred Cc
Q 032621 103 GF 104 (137)
Q Consensus 103 G~ 104 (137)
|+
T Consensus 144 ~~ 145 (182)
T 2j16_A 144 NL 145 (182)
T ss_dssp TC
T ss_pred CC
Confidence 65
No 90
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=92.57 E-value=0.075 Score=34.60 Aligned_cols=78 Identities=19% Similarity=0.236 Sum_probs=38.9
Q ss_pred HhhCC-CEEEecCChHH--Hhc-cCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHH
Q 032621 23 LLESG-YGYLDVRTAEE--FKE-GHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA 95 (137)
Q Consensus 23 ~~~~~-~~viDvR~~~e--~~~-g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~ 95 (137)
+.+.+ ..||++|+... |.. |. -.+.++|+...... .+.. .+..+.+......+.+|+++|..|. ||..+
T Consensus 27 L~~~gI~~Vi~l~~~~~~~~~~~~~---i~~~~ipi~D~~~~-~l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~v 102 (155)
T 2hxp_A 27 LAKLGIRYILNVTPNLPNFFEKNGD---FHYKQIPISDHWSQ-NLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVTV 102 (155)
T ss_dssp HHHTTEEEEEECSSSCCCTTTTCTT---CEEEECCCCGGGGG-GHHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred HHHCCCCEEEEeCCCCcccccCCCC---eEEEEEECccCCCC-CHHHHHHHHHHHHHHHHHcCCcEEEECCCCCchhHHH
Confidence 33445 56999997421 111 11 34566776432110 0000 1112222222446789999999994 87644
Q ss_pred -HHHH-HHCCc
Q 032621 96 -TADL-LGAGF 104 (137)
Q Consensus 96 -~~~l-~~~G~ 104 (137)
+.+| ...|+
T Consensus 103 v~ayLm~~~~~ 113 (155)
T 2hxp_A 103 TVAYLMQKLHL 113 (155)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHcCC
Confidence 3334 44565
No 91
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=92.56 E-value=0.15 Score=33.51 Aligned_cols=78 Identities=10% Similarity=0.097 Sum_probs=37.0
Q ss_pred hCC-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCC--ChHHHHHHHhhccCCCcEEEEeCCCc-hHHHH-HHH-
Q 032621 25 ESG-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK--NPDFLKKVRSLCKEEDRLVVGCQSGA-RSLHA-TAD- 98 (137)
Q Consensus 25 ~~~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~--~~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~-~~~- 98 (137)
+.+ ..||+++.... .....+-.+.++|....... .+. -.+..+.+.+.+..+.+|++.|..|. ||..+ +.+
T Consensus 33 ~~gIt~Vlnl~~~~~--~~~~~~~~~~~ipi~D~~~~-~l~~~~~~~~~fI~~~~~~~~~VlVHC~~G~sRS~~vv~ayL 109 (161)
T 3emu_A 33 NNNISSILLVGIEVP--SLFKDQCDILRLDIVSEEGH-QLYDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPAIVIAFL 109 (161)
T ss_dssp HTTEEEEEEEC---------CTTSEEEEECCCCSSTT-HHHHHHHHHHHHHHHHHHTTCEEEEEESSSSSHHHHHHHHHH
T ss_pred HCCCCEEEEeCCCCc--cccCCCCEEEEEeCcCCCCC-cHHHHHHHHHHHHHHHHhcCCeEEEEcCCCCcHHHHHHHHHH
Confidence 345 56999996422 11122345567776422110 000 01111222222346788999999997 75443 344
Q ss_pred HHHCCcc
Q 032621 99 LLGAGFK 105 (137)
Q Consensus 99 l~~~G~~ 105 (137)
+...|++
T Consensus 110 m~~~~~s 116 (161)
T 3emu_A 110 MYYQRLS 116 (161)
T ss_dssp HHHTTCC
T ss_pred HHHhCCC
Confidence 4556763
No 92
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=92.30 E-value=0.37 Score=31.56 Aligned_cols=91 Identities=13% Similarity=0.109 Sum_probs=44.5
Q ss_pred eeCHHHHHHHhhCC-CEEEecCChHH-HhccCC--CCceeeCccccccCCCCCCCChHHHHHHHhhc--cCCCcEEEEeC
Q 032621 14 TVDVRAAKNLLESG-YGYLDVRTAEE-FKEGHV--DAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC--KEEDRLVVGCQ 87 (137)
Q Consensus 14 ~is~~~~~~~~~~~-~~viDvR~~~e-~~~g~i--pga~~inip~~~~~~~~~~~~~~~~~~~~~~~--~~~~~iv~~c~ 87 (137)
.-+++++++. +.+ ..|||++.... |....+ .|-.+.++|+........-....|...+...+ ..+.+|+++|.
T Consensus 43 ~~~~~~ll~~-~~gi~~Vi~l~~~~~~~~~~~~~~~gi~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~vlVHC~ 121 (169)
T 1yn9_A 43 VWTAEQIVKQ-NPSIGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQTLPPESIVQEFIDTVKEFTEKCPGMLVGVHCT 121 (169)
T ss_dssp CCCHHHHHHH-CTTEEEEEECCSCSCSCCTHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHHHHHSTTSEEEEECS
T ss_pred CCCHHHHHhh-CCCcCEEEEcCCCCCCCCHHHHHhcCCEEEEEeCCCCCCCCHHHHHHHHHHHHHHHHhCCCCcEEEECC
Confidence 3456666664 345 67999986431 221111 13344566653221100000012333332221 36778999999
Q ss_pred CCc-hHHHH-HHHHHH-CCcc
Q 032621 88 SGA-RSLHA-TADLLG-AGFK 105 (137)
Q Consensus 88 ~g~-ra~~~-~~~l~~-~G~~ 105 (137)
.|. |+..+ +.+|.. .|++
T Consensus 122 aG~~RTg~~va~~L~~~~~~~ 142 (169)
T 1yn9_A 122 HGINRTGYMVCRYLMHTLGIA 142 (169)
T ss_dssp SSSHHHHHHHHHHHHHHHCCC
T ss_pred CCCChHHHHHHHHHHHHhCCC
Confidence 886 65443 444544 6663
No 93
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=91.70 E-value=1 Score=30.62 Aligned_cols=76 Identities=21% Similarity=0.262 Sum_probs=39.7
Q ss_pred hCC-CEEEecCChHH-------HhccCCCCceeeCccccccCCCCCCCChHHHH---HHHhhcc-CCCcEEEEeCCCc-h
Q 032621 25 ESG-YGYLDVRTAEE-------FKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLK---KVRSLCK-EEDRLVVGCQSGA-R 91 (137)
Q Consensus 25 ~~~-~~viDvR~~~e-------~~~g~ipga~~inip~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~iv~~c~~g~-r 91 (137)
+.+ ..|||++...+ +..+ .+-.+.++|.... +..++. ..|.. .+...+. .+.+|+++|..|. |
T Consensus 69 ~~gIt~Vinl~~~~~~~~~~~~~~~~--~~i~y~~ipi~D~-p~~dl~-~~f~~~~~fI~~~l~~~~~~VLVHC~aG~sR 144 (205)
T 2pq5_A 69 QLGITHVVNAAAGKFQVDTGAKFYRG--MSLEYYGIEADDN-PFFDLS-VYFLPVARYIRAALSVPQGRVLVHCAMGVSR 144 (205)
T ss_dssp HHTCCEEEETBCSTTSCCCHHHHTTT--SSCEEEECBCCCC-TTSCGG-GGHHHHHHHHHHHHTSTTCCEEEECSSSSSH
T ss_pred HcCCeEEEEeCCCcccCCcchhhhcc--CCceEEeeecCCC-CcchHH-HHHHHHHHHHHHHHhcCCCeEEEECCCCCcH
Confidence 345 67999997431 1111 1235567776432 222221 12222 2322233 5778999999995 7
Q ss_pred HHHH-HH-HHHHCCc
Q 032621 92 SLHA-TA-DLLGAGF 104 (137)
Q Consensus 92 a~~~-~~-~l~~~G~ 104 (137)
|..+ +. .+...|+
T Consensus 145 S~tvv~aYLm~~~~~ 159 (205)
T 2pq5_A 145 SATLVLAFLMIYENM 159 (205)
T ss_dssp HHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHcCC
Confidence 7644 33 4455665
No 94
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=91.40 E-value=0.64 Score=29.69 Aligned_cols=89 Identities=18% Similarity=0.263 Sum_probs=45.1
Q ss_pred eeCHHHHHHHhhC-C-CEEEecCChH----HHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhc--cCCCcEEEE
Q 032621 14 TVDVRAAKNLLES-G-YGYLDVRTAE----EFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC--KEEDRLVVG 85 (137)
Q Consensus 14 ~is~~~~~~~~~~-~-~~viDvR~~~----e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~--~~~~~iv~~ 85 (137)
..+.+++.+.+.+ + ..||+++... .+.. .+-.+.++|.....+...-...++...+...+ .++.+|+++
T Consensus 26 ~~t~~df~~~l~~~gi~~Iv~l~~~~~~~~~~~~---~~~~~~~~p~~d~~~~~~~~~~~~~~~i~~~~~~~~~~~vlVH 102 (159)
T 1rxd_A 26 NATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK---EGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVH 102 (159)
T ss_dssp GGGHHHHHHHHHHTTEEEEEECSCCCSCCHHHHH---TTCEEEECCC--CCCCCHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred cccHHHHHHHHHHcCCCEEEEcCCCccCHHHHHH---cCCEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 4567776666654 4 5688988642 1222 23345666643221111000012333333321 356899999
Q ss_pred eCCCc-hHHHH-HHHHHHCCcc
Q 032621 86 CQSGA-RSLHA-TADLLGAGFK 105 (137)
Q Consensus 86 c~~g~-ra~~~-~~~l~~~G~~ 105 (137)
|..|. |+..+ +..|...|++
T Consensus 103 C~aG~~Rtg~~~a~~l~~~~~~ 124 (159)
T 1rxd_A 103 CVAGLGRAPVLVALALIEGGMK 124 (159)
T ss_dssp CSSSSTTHHHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHHHhCCC
Confidence 99886 66554 4455555653
No 95
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=91.10 E-value=1.2 Score=30.75 Aligned_cols=77 Identities=12% Similarity=0.116 Sum_probs=39.7
Q ss_pred hCC-CEEEecCChH-------HHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhc-cCCCcEEEEeCCCc-hH
Q 032621 25 ESG-YGYLDVRTAE-------EFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLC-KEEDRLVVGCQSGA-RS 92 (137)
Q Consensus 25 ~~~-~~viDvR~~~-------e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~iv~~c~~g~-ra 92 (137)
+.+ ..||+++... +|.. -.|-.++++|.... +...+.. ....+.+...+ ..+.+|+++|..|. ||
T Consensus 77 ~~gIt~VInl~~~~~~~~~~~~~~~--~~~i~y~~ipi~D~-~~~~l~~~~~~~~~fI~~~l~~~~~~VLVHC~aG~sRS 153 (219)
T 2y96_A 77 KAGFTHVLNAAHGRWNVDTGPDYYR--DMDIQYHGVEADDL-PTFDLSVFFYPAAAFIDRALSDDHSKILVHCVMGRSRS 153 (219)
T ss_dssp HTTCCEEEETTBSTTSBCCHHHHTT--TSCCEEEECCCCSS-TTSCGGGGHHHHHHHHHHHHTSTTCCEEEECSSSSSHH
T ss_pred HCCCeEEEECCCCccccccchhhhc--ccCcEEEEEECCCC-CchhHHHHHHHHHHHHHHHHHccCCeEEEECCCCCCHH
Confidence 345 5799999642 1110 11334566776432 1111110 12223333333 46788999999995 76
Q ss_pred HHH-HH-HHHHCCc
Q 032621 93 LHA-TA-DLLGAGF 104 (137)
Q Consensus 93 ~~~-~~-~l~~~G~ 104 (137)
..+ +. .+...|+
T Consensus 154 ~tvv~aYLm~~~~~ 167 (219)
T 2y96_A 154 ATLVLAYLMIHKDM 167 (219)
T ss_dssp HHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHcCC
Confidence 653 33 4455665
No 96
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=89.88 E-value=0.99 Score=30.42 Aligned_cols=75 Identities=16% Similarity=0.127 Sum_probs=40.2
Q ss_pred CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHHHH-HH-HHC
Q 032621 28 YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHATA-DL-LGA 102 (137)
Q Consensus 28 ~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~~~-~l-~~~ 102 (137)
..|||+|+..+. -...+-.++++|..... ...+.. ..+.+.+......+.+|++.|..|. |+..++. .| ...
T Consensus 75 ~~Vi~l~~~~~~--~~~~~~~~~~~p~~d~~-~~~l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~v~~yL~~~~ 151 (195)
T 2q05_A 75 KYVLNLTMDKYT--LPNSNINIIHIPLVDDT-TTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAMILAYLMSKN 151 (195)
T ss_dssp SEEEECSSSCCC--CTTCCCEEEECCCCCSS-SCCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCC--cccCCcEEEEEEcCCCC-cccHHHHHHHHHHHHHHHHHcCCcEEEEcCCCCChHHHHHHHHHHHHh
Confidence 369999985432 12234456677764321 111110 2333334333446789999999985 7655533 33 345
Q ss_pred Ccc
Q 032621 103 GFK 105 (137)
Q Consensus 103 G~~ 105 (137)
|++
T Consensus 152 ~~~ 154 (195)
T 2q05_A 152 KES 154 (195)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
No 97
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=89.83 E-value=0.038 Score=37.06 Aligned_cols=23 Identities=22% Similarity=0.307 Sum_probs=20.2
Q ss_pred CEEEecCChHHHhccCCCCceeeCccccc
Q 032621 28 YGYLDVRTAEEFKEGHVDAAKIFNIPYMF 56 (137)
Q Consensus 28 ~~viDvR~~~e~~~g~ipga~~inip~~~ 56 (137)
.++||||.+.||. ||| +|||-..
T Consensus 122 ~~liDvRe~~E~~----pgA--~~iprg~ 144 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGS--LSIPQLR 144 (168)
T ss_dssp TEEEEEEEEEEEE----ETT--EEEEEEE
T ss_pred eEEEECCChhhcC----CCC--EEcChhH
Confidence 3899999999999 999 9999753
No 98
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=87.91 E-value=3.6 Score=30.51 Aligned_cols=82 Identities=7% Similarity=0.134 Sum_probs=43.7
Q ss_pred CHHHHHHHhhC-C-CEEEecCCh----HHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh-ccCCCcEEEEeCC
Q 032621 16 DVRAAKNLLES-G-YGYLDVRTA----EEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVVGCQS 88 (137)
Q Consensus 16 s~~~~~~~~~~-~-~~viDvR~~----~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iv~~c~~ 88 (137)
++++..+.+++ + ..|||+|.. ..+.. .|-.++++|+... .....+....+-+. ...+.+|+++|..
T Consensus 206 ~~~~~~~~L~~~GI~~VInL~~~~y~~~~~~~---~gi~~~~ipi~D~----~~P~~~~~~~fi~~~~~~~~~VLVHC~a 278 (348)
T 1ohe_A 206 SPETYIQYFKNHNVTTIIRLNKRMYDAKRFTD---AGFDHHDLFFADG----STPTDAIVKEFLDICENAEGAIAVHSKA 278 (348)
T ss_dssp CTHHHHHHHHHTTEEEEEECSCCSSCTHHHHT---TTCEEEECCCCTT----CCCCHHHHHHHHHHHHSCSSEEEEECSS
T ss_pred CHHHHHHHHHHcCCCEEEECCCCcCChhhhhc---CCcEEEEecCCCC----CCCCHHHHHHHHHHHHhCCCcEEEECCC
Confidence 35555555554 5 579999964 22322 2334566776421 11122222222222 3567899999999
Q ss_pred Cc-hHHHH-HHHHHH-CCc
Q 032621 89 GA-RSLHA-TADLLG-AGF 104 (137)
Q Consensus 89 g~-ra~~~-~~~l~~-~G~ 104 (137)
|. |+..+ +..|.. .|+
T Consensus 279 G~gRTGtvvaayLm~~~g~ 297 (348)
T 1ohe_A 279 GLGRTGTLIACYIMKHYRM 297 (348)
T ss_dssp SSHHHHHHHHHHHHHHHCC
T ss_pred CCChHHHHHHHHHHHHcCC
Confidence 85 65444 334444 565
No 99
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=87.84 E-value=1.6 Score=31.51 Aligned_cols=89 Identities=9% Similarity=0.045 Sum_probs=45.1
Q ss_pred CHHHHHHHhhCC-CEEEecCChHHHhcc------------CCCCceeeCccccccCCCCCC-CChHHHHHHHhhc-cCCC
Q 032621 16 DVRAAKNLLESG-YGYLDVRTAEEFKEG------------HVDAAKIFNIPYMFNTPEGRV-KNPDFLKKVRSLC-KEED 80 (137)
Q Consensus 16 s~~~~~~~~~~~-~~viDvR~~~e~~~g------------~ipga~~inip~~~~~~~~~~-~~~~~~~~~~~~~-~~~~ 80 (137)
+..++..+-+.+ ..||+++...+...- ...|-.++++|+......... .-.+....+...+ ..+.
T Consensus 28 ~~~d~~~L~~~GIt~Vlnl~~~~e~~~~g~~~~~~~~~~~~~~gi~~~~ipi~D~~~~~l~~~~~~~~~~I~~~l~~~g~ 107 (294)
T 3nme_A 28 TPEDVDKLRKIGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDFDAFDLRMRLPAVVGTLYKAVKRNGG 107 (294)
T ss_dssp STHHHHHHHHTTEEEEEECCCHHHHHHTTCCHHHHHHHHHTCTTCEEEECCCCTTCHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred CHHHHHHHHHCCCCEEEECCCCcchhhccCChhhhhhhhhhcCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 345555554556 579999987663321 112446677777422100000 0011122232223 2467
Q ss_pred cEEEEeCCCc-hHHH-HHHHHHH-CCc
Q 032621 81 RLVVGCQSGA-RSLH-ATADLLG-AGF 104 (137)
Q Consensus 81 ~iv~~c~~g~-ra~~-~~~~l~~-~G~ 104 (137)
+|+++|..|. ||.. ++.+|.. .|+
T Consensus 108 ~VLVHC~aG~sRS~tvv~ayLm~~~g~ 134 (294)
T 3nme_A 108 VTYVHSTAGMGRAPAVALTYMFWVQGY 134 (294)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred EEEEECCCCCchhHHHHHHHHHHHhCC
Confidence 8999999997 7544 3444443 455
No 100
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=87.62 E-value=0.76 Score=30.31 Aligned_cols=75 Identities=13% Similarity=0.076 Sum_probs=39.0
Q ss_pred CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCC--hHHHHHHHhhccCCCcEEEEeCCCc-hHHHHH--HHHHHC
Q 032621 28 YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKN--PDFLKKVRSLCKEEDRLVVGCQSGA-RSLHAT--ADLLGA 102 (137)
Q Consensus 28 ~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~--~~~~~~~~~~~~~~~~iv~~c~~g~-ra~~~~--~~l~~~ 102 (137)
..||+++...+.. ...+-.+.++|....... .+.. ....+.+......+.+|+++|..|. ||..++ ..+...
T Consensus 58 ~~Ii~l~~~~~~~--~~~~~~~~~~p~~d~~~~-~l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~v~aylm~~~ 134 (176)
T 3cm3_A 58 KYVLNLTMDKYTL--PNSNINIIHIPLVDDTTT-DISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKN 134 (176)
T ss_dssp SEEEECSSSCCCC--TTSCCEEEECCCCCSSSC-CCGGGHHHHHHHHHHHHHHTCCEEEECSSSSSHHHHHHHHHHHHHC
T ss_pred CEEEEecCCCCCc--CCCCCEEEEEECCCCCcc-cHHHHHHHHHHHHHHHHHCCCcEEEECCcCCCHHHHHHHHHHHHHh
Confidence 3699999753321 112335566776432211 1111 2233333333345788999999985 765543 334445
Q ss_pred Ccc
Q 032621 103 GFK 105 (137)
Q Consensus 103 G~~ 105 (137)
|++
T Consensus 135 ~~~ 137 (176)
T 3cm3_A 135 KES 137 (176)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
No 101
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=87.49 E-value=1.9 Score=27.87 Aligned_cols=89 Identities=13% Similarity=0.095 Sum_probs=46.2
Q ss_pred eeeCHHHHHHHhhCC-CEEEecCChHHHhc-------cCCCCceeeCccccccCCCCCCCChHHHHHHHhhcc-CCCcEE
Q 032621 13 ITVDVRAAKNLLESG-YGYLDVRTAEEFKE-------GHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCK-EEDRLV 83 (137)
Q Consensus 13 ~~is~~~~~~~~~~~-~~viDvR~~~e~~~-------g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iv 83 (137)
..++...+..+.+.| .++|+.|+..+-.. -.-.|...+.+|.+..++ +..+..+.+..... .+++|+
T Consensus 26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~----~~~~v~~~~~~i~~~~G~dVL 101 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNP----KVEDVEAFFAAMDQHKGKDVL 101 (157)
T ss_dssp BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSC----CHHHHHHHHHHHHHTTTSCEE
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCC----CHHHHHHHHHHHHhcCCCCEE
Confidence 356677777777777 57888886543210 001244446666642111 11222222222211 234899
Q ss_pred EEeCCCchHHHH-HHHHHHCCcc
Q 032621 84 VGCQSGARSLHA-TADLLGAGFK 105 (137)
Q Consensus 84 ~~c~~g~ra~~~-~~~l~~~G~~ 105 (137)
+.|.+|.+...+ +..+...|.+
T Consensus 102 VnnAgg~r~~~l~~~~~~~~G~~ 124 (157)
T 3gxh_A 102 VHCLANYRASAFAYLYQLKQGQN 124 (157)
T ss_dssp EECSBSHHHHHHHHHHHHHTTCC
T ss_pred EECCCCCCHHHHHHHHHHHcCCC
Confidence 999988765443 3444456654
No 102
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=87.42 E-value=1.1 Score=31.55 Aligned_cols=86 Identities=15% Similarity=0.226 Sum_probs=45.5
Q ss_pred eeCHHHHHHHhhC---C-CEEEecCCh------HHHhccCCCCceeeCccccccCCCCCCCCh----HHHHHHHhhcc--
Q 032621 14 TVDVRAAKNLLES---G-YGYLDVRTA------EEFKEGHVDAAKIFNIPYMFNTPEGRVKNP----DFLKKVRSLCK-- 77 (137)
Q Consensus 14 ~is~~~~~~~~~~---~-~~viDvR~~------~e~~~g~ipga~~inip~~~~~~~~~~~~~----~~~~~~~~~~~-- 77 (137)
+.++.++.+.++. + ..|||++.. ..|...+| .++++|+... +..... .|...+...+.
T Consensus 66 r~~~~~v~~~l~~~~~~i~~VInL~~e~~~y~~~~~~~~gi---~y~~~p~~D~---~~~P~~~~l~~~~~~i~~~~~~~ 139 (241)
T 2c46_A 66 RFHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEKEGI---KYIKLQCKGH---GECPTTENTETFIRLCERFNERN 139 (241)
T ss_dssp CCCHHHHHHHHHHHTCEEEEEEECSSCSCSSCTHHHHTTTC---EEEECCCCCT---TCCCCHHHHHHHHHHHTTC----
T ss_pred cCCHHHHHHHHHHhCCCcceeeeccCCCCCCCHHHHHHCCC---EEEEEecCCC---CCCCChHHHHHHHHHHHHHHHhC
Confidence 4567888776653 3 679999864 33333333 4566776321 111112 23333333222
Q ss_pred CCCcEEEEeCCCc-hHHHH-HHHHHH-CCcc
Q 032621 78 EEDRLVVGCQSGA-RSLHA-TADLLG-AGFK 105 (137)
Q Consensus 78 ~~~~iv~~c~~g~-ra~~~-~~~l~~-~G~~ 105 (137)
++.+|++.|..|. |+..+ +.+|.. .|++
T Consensus 140 ~~~~VlVHC~aG~gRTGt~ia~yLm~~~~~s 170 (241)
T 2c46_A 140 PPELIGVHCTHGFNRTGFLICAFLVEKMDWS 170 (241)
T ss_dssp -CEEEEEECSSSSHHHHHHHHHHHHHTTCCC
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHHhCCC
Confidence 3478999999886 65443 344444 5653
No 103
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=85.06 E-value=2.2 Score=28.25 Aligned_cols=38 Identities=11% Similarity=0.117 Sum_probs=29.5
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
.++.+++++|++-..+...+..|...|+. +..+.|++.
T Consensus 44 ~~~~k~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~~ 81 (185)
T 2jgn_A 44 GKDSLTLVFVETKKGADSLEDFLYHEGYA-CTSIHGDRS 81 (185)
T ss_dssp -CCSCEEEEESCHHHHHHHHHHHHHTTCC-EEEEC----
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHHcCCc-eEEEeCCCC
Confidence 45678999999988999999999999986 888998764
No 104
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=81.74 E-value=1.7 Score=28.03 Aligned_cols=36 Identities=19% Similarity=0.391 Sum_probs=31.4
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
...+++++|++-..+...+..|...|+. +..+.|++
T Consensus 34 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~ 69 (163)
T 2hjv_A 34 NPDSCIIFCRTKEHVNQLTDELDDLGYP-CDKIHGGM 69 (163)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTS
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCC
Confidence 4567999999988999999999999986 88888875
No 105
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=81.16 E-value=4.3 Score=28.55 Aligned_cols=45 Identities=16% Similarity=0.050 Sum_probs=32.0
Q ss_pred CcEEEEeCCCc---hHHHHHHHHHHCCccceeec-ccc----------HHHHHhCCCcee
Q 032621 80 DRLVVGCQSGA---RSLHATADLLGAGFKHVSNF-GGG----------HMAWVQNGLKVK 125 (137)
Q Consensus 80 ~~iv~~c~~g~---ra~~~~~~l~~~G~~~v~~l-~GG----------~~~w~~~~~p~~ 125 (137)
.+|+++|..|. .+..+|++|...||+ |.++ .+. +..|...+.++.
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~~g~~~~ 117 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYN-PVVFYPKRSERTEFYKQLVHQLNFFKVPVL 117 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCC-EEEECCCCCTTCHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEEEcCCCCCCHHHHHHHHHHHHcCCcEE
Confidence 58999999876 578889999999996 6543 322 345666666554
No 106
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=80.76 E-value=1.5 Score=28.44 Aligned_cols=35 Identities=17% Similarity=0.147 Sum_probs=25.8
Q ss_pred CcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccH
Q 032621 80 DRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 80 ~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
..|+|+|.+.. ||..|...|+.+.-+++.+...|.
T Consensus 21 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt 56 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGT 56 (148)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEES
T ss_pred CEEEEECCCchhHHHHHHHHHHHhcCCCEEEEeccc
Confidence 46999999876 999999999886544555554443
No 107
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=80.56 E-value=1.6 Score=27.86 Aligned_cols=36 Identities=14% Similarity=-0.007 Sum_probs=26.4
Q ss_pred CcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccHH
Q 032621 80 DRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 80 ~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
+.|+|+|.+.. ||..|...|+.+.-.++.+...|..
T Consensus 4 ~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt~ 40 (139)
T 1jl3_A 4 KIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIE 40 (139)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESS
T ss_pred CeEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcCC
Confidence 36999999876 9999999988864344656655543
No 108
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=80.00 E-value=0.88 Score=29.93 Aligned_cols=38 Identities=18% Similarity=0.260 Sum_probs=27.2
Q ss_pred CcEEEEeCCCc-hHHHHHHHHHH----CCccceeeccccHHHH
Q 032621 80 DRLVVGCQSGA-RSLHATADLLG----AGFKHVSNFGGGHMAW 117 (137)
Q Consensus 80 ~~iv~~c~~g~-ra~~~~~~l~~----~G~~~v~~l~GG~~~w 117 (137)
..|+|+|.+.. ||..+...|+. .|..++.+...|...|
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~ 49 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSW 49 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCC
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCc
Confidence 35999999876 88888777665 4555566666676665
No 109
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=79.68 E-value=2.5 Score=30.06 Aligned_cols=30 Identities=13% Similarity=0.239 Sum_probs=24.3
Q ss_pred CcEEEEeCCCc---hHHHHHHHHHHCCccceeec
Q 032621 80 DRLVVGCQSGA---RSLHATADLLGAGFKHVSNF 110 (137)
Q Consensus 80 ~~iv~~c~~g~---ra~~~~~~l~~~G~~~v~~l 110 (137)
.+|+++|..|. .+..+|++|...||+ |.++
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 118 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 118 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 47999999876 578889999999997 6543
No 110
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=79.57 E-value=0.89 Score=29.89 Aligned_cols=38 Identities=21% Similarity=0.279 Sum_probs=27.1
Q ss_pred CcEEEEeCCCc-hHHHHHHHHHHC----Ccc-ceeeccccHHHH
Q 032621 80 DRLVVGCQSGA-RSLHATADLLGA----GFK-HVSNFGGGHMAW 117 (137)
Q Consensus 80 ~~iv~~c~~g~-ra~~~~~~l~~~----G~~-~v~~l~GG~~~w 117 (137)
..|+|+|.+.. ||..|...|+.+ |.. ++.+...|..+|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~ 48 (163)
T 1u2p_A 5 LHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNW 48 (163)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCT
T ss_pred CEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCC
Confidence 46999999877 888887777654 443 466666676665
No 111
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=79.56 E-value=4.4 Score=25.99 Aligned_cols=36 Identities=19% Similarity=0.210 Sum_probs=31.1
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
+..+++++|++-..+...+..|...|+. +..+.|++
T Consensus 29 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~~~~ 64 (165)
T 1fuk_A 29 SVTQAVIFCNTRRKVEELTTKLRNDKFT-VSAIYSDL 64 (165)
T ss_dssp TCSCEEEEESSHHHHHHHHHHHHHTTCC-EEEECTTS
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCC-EEEEECCC
Confidence 5567999999988999999999999986 88888874
No 112
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=79.42 E-value=3.7 Score=27.15 Aligned_cols=45 Identities=16% Similarity=0.110 Sum_probs=33.9
Q ss_pred HHHhhccCCCcEEEEeCCCc--hHHHHHHHHHH---CCccceeeccccHH
Q 032621 71 KVRSLCKEEDRLVVGCQSGA--RSLHATADLLG---AGFKHVSNFGGGHM 115 (137)
Q Consensus 71 ~~~~~~~~~~~iv~~c~~g~--ra~~~~~~l~~---~G~~~v~~l~GG~~ 115 (137)
.+...++++..+|+.|-.|. .|..+|..|.. .|..++.++-||-.
T Consensus 66 ~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~ 115 (163)
T 4fak_A 66 RILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSN 115 (163)
T ss_dssp HHHHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTT
T ss_pred HHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCC
Confidence 34444677777888888776 68888988876 68888999999843
No 113
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=79.24 E-value=2.3 Score=27.78 Aligned_cols=37 Identities=19% Similarity=0.180 Sum_probs=31.8
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
+..+++++|++-..+..++..|...|+. +..+.|++.
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~~ 66 (172)
T 1t5i_A 30 EFNQVVIFVKSVQRCIALAQLLVEQNFP-AIAIHRGMP 66 (172)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCCcEEEEECCHHHHHHHHHHHHhcCCC-EEEEECCCC
Confidence 5567999999988999999999999986 888888753
No 114
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=78.56 E-value=2.2 Score=27.01 Aligned_cols=35 Identities=17% Similarity=0.179 Sum_probs=26.3
Q ss_pred cEEEEeCCCc-hHHHHHHHHHHCCccceeeccccHH
Q 032621 81 RLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 81 ~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
.|+|+|.+.. ||..|...|+.+.-+++.+...|..
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 41 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLE 41 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCT
T ss_pred EEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCC
Confidence 5999999877 9999999998865445655555543
No 115
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=78.47 E-value=2.4 Score=27.58 Aligned_cols=36 Identities=19% Similarity=0.339 Sum_probs=31.3
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
+..+++++|++-..+...+..|...|+. +..+.|++
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~g~~ 68 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGHQ-VSLLSGEL 68 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTCC-EEEECSSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCC
Confidence 4567999999988999999999999986 88899884
No 116
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=78.47 E-value=0.6 Score=31.57 Aligned_cols=38 Identities=21% Similarity=0.190 Sum_probs=26.8
Q ss_pred CcEEEEeCCCc-hHHHHHHHHHHCCcc---ceeeccccHHHH
Q 032621 80 DRLVVGCQSGA-RSLHATADLLGAGFK---HVSNFGGGHMAW 117 (137)
Q Consensus 80 ~~iv~~c~~g~-ra~~~~~~l~~~G~~---~v~~l~GG~~~w 117 (137)
..|+|+|.+.. ||..|...|+.+.-+ ++.+...|..+|
T Consensus 35 ~~VLFVC~gNiCRSpmAEai~r~~~~~~g~~~~v~SAGt~~~ 76 (184)
T 4etn_A 35 MDIIFVCTGNTSRSPMAEALFKSIAEREGLNVNVRSAGVFAS 76 (184)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCC
T ss_pred CEEEEECCCchhHHHHHHHHHHHHHHhcCCcEEEEeeecCCc
Confidence 46999999877 898888777664221 466666676665
No 117
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=78.32 E-value=2.8 Score=30.58 Aligned_cols=30 Identities=13% Similarity=0.239 Sum_probs=24.3
Q ss_pred CcEEEEeCCCc---hHHHHHHHHHHCCccceeec
Q 032621 80 DRLVVGCQSGA---RSLHATADLLGAGFKHVSNF 110 (137)
Q Consensus 80 ~~iv~~c~~g~---ra~~~~~~l~~~G~~~v~~l 110 (137)
.+|+++|..|. .+..+|++|...||+ |.++
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 165 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 165 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 57999999875 578889999999996 6543
No 118
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=78.20 E-value=8.4 Score=27.43 Aligned_cols=89 Identities=17% Similarity=0.210 Sum_probs=52.0
Q ss_pred eCHHHHHHHhhC----C-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCC
Q 032621 15 VDVRAAKNLLES----G-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG 89 (137)
Q Consensus 15 is~~~~~~~~~~----~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g 89 (137)
++.+++.++++. + -++|.|.+.+|.+...-.|+..+-|-.- ...+..+ +-+-...+...++.+ +++++-+|
T Consensus 137 L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNR-nL~tf~v-dl~~t~~L~~~ip~~--~~~VsESG 212 (258)
T 4a29_A 137 LTERELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIMSR-DFETGEI-NKENQRKLISMIPSN--VVKVAKLG 212 (258)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSB-CTTTCCB-CHHHHHHHHTTSCTT--SEEEEEES
T ss_pred cCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCC-Ccccccc-CHHHHHHHHhhCCCC--CEEEEcCC
Confidence 445555555432 4 5799999999886533334422322110 0011112 223444555555443 57788899
Q ss_pred chHHHHHHHHHHCCccce
Q 032621 90 ARSLHATADLLGAGFKHV 107 (137)
Q Consensus 90 ~ra~~~~~~l~~~G~~~v 107 (137)
..+..-...+...|++.+
T Consensus 213 I~t~~dv~~l~~~G~~a~ 230 (258)
T 4a29_A 213 ISERNEIEELRKLGVNAF 230 (258)
T ss_dssp SCCHHHHHHHHHTTCCEE
T ss_pred CCCHHHHHHHHHCCCCEE
Confidence 999999999999999733
No 119
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=78.16 E-value=2.1 Score=27.04 Aligned_cols=36 Identities=11% Similarity=-0.110 Sum_probs=26.2
Q ss_pred CcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccHH
Q 032621 80 DRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 80 ~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
+.|+|+|.+.. ||..+...|+.+.-.++.+...|..
T Consensus 4 ~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 40 (131)
T 1jf8_A 4 KTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIE 40 (131)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESS
T ss_pred CEEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcCC
Confidence 35999999876 9999999888854344656555543
No 120
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=78.02 E-value=2.8 Score=29.92 Aligned_cols=30 Identities=20% Similarity=0.359 Sum_probs=24.5
Q ss_pred CcEEEEeCCCc---hHHHHHHHHHHCCccceeec
Q 032621 80 DRLVVGCQSGA---RSLHATADLLGAGFKHVSNF 110 (137)
Q Consensus 80 ~~iv~~c~~g~---ra~~~~~~l~~~G~~~v~~l 110 (137)
++|+++|..|. .+..+|++|...||+ |.++
T Consensus 80 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 112 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDGLVCARHLKLFGYQ-PTIY 112 (265)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 58999999876 578889999999996 6543
No 121
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=77.89 E-value=0.66 Score=30.53 Aligned_cols=39 Identities=23% Similarity=0.301 Sum_probs=28.6
Q ss_pred CCcEEEEeCCCc-hHHHHHHHHHHC----Cc-cceeeccccHHHH
Q 032621 79 EDRLVVGCQSGA-RSLHATADLLGA----GF-KHVSNFGGGHMAW 117 (137)
Q Consensus 79 ~~~iv~~c~~g~-ra~~~~~~l~~~----G~-~~v~~l~GG~~~w 117 (137)
...|+|+|.+.. ||..+...|+.+ |. +++.+...|...|
T Consensus 4 ~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~ 48 (161)
T 2cwd_A 4 PVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAW 48 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCC
Confidence 346999999877 998888777663 54 3566777777766
No 122
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=77.77 E-value=0.28 Score=31.79 Aligned_cols=38 Identities=8% Similarity=-0.033 Sum_probs=27.2
Q ss_pred CcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccHHHH
Q 032621 80 DRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHMAW 117 (137)
Q Consensus 80 ~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~~w 117 (137)
..|+|+|.+.. ||..+...|+.+.-+++.+...|...|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~ 43 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGF 43 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCc
Confidence 46999999876 888888888876444455556566555
No 123
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=75.40 E-value=0.63 Score=30.48 Aligned_cols=37 Identities=14% Similarity=0.086 Sum_probs=26.2
Q ss_pred cEEEEeCCCc-hHHHHHHHHHHC----Ccc-ceeeccccHHHH
Q 032621 81 RLVVGCQSGA-RSLHATADLLGA----GFK-HVSNFGGGHMAW 117 (137)
Q Consensus 81 ~iv~~c~~g~-ra~~~~~~l~~~----G~~-~v~~l~GG~~~w 117 (137)
.|+|+|.+.. ||..|...|+.+ |.. ++.+...|..+|
T Consensus 3 ~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~ 45 (156)
T 2gi4_A 3 KILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGE 45 (156)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCS
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCc
Confidence 6999999876 888888777653 443 466666666655
No 124
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=74.47 E-value=7 Score=24.56 Aligned_cols=42 Identities=12% Similarity=0.096 Sum_probs=28.7
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHH
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWV 118 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~ 118 (137)
+++-+|+++++...-.......|...||..|..-..|..++.
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~ 51 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALP 51 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHH
Confidence 445568888776666666777788888876665566666653
No 125
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=74.46 E-value=0.87 Score=29.90 Aligned_cols=38 Identities=16% Similarity=-0.044 Sum_probs=26.8
Q ss_pred CcEEEEeCCCc-hHHHHHHHHHH----CCcc-c-eeeccccHHHH
Q 032621 80 DRLVVGCQSGA-RSLHATADLLG----AGFK-H-VSNFGGGHMAW 117 (137)
Q Consensus 80 ~~iv~~c~~g~-ra~~~~~~l~~----~G~~-~-v~~l~GG~~~w 117 (137)
..|+|+|.+.. ||..|...|+. .|.. + +.+...|..+|
T Consensus 8 ~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~ 52 (161)
T 1d1q_A 8 ISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNY 52 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCC
Confidence 46999999876 88888777665 3543 3 66666676655
No 126
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=73.54 E-value=6.6 Score=26.08 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=30.2
Q ss_pred CCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621 79 EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
..+++++|++-..+...+..|...|+. +..+.|+.
T Consensus 54 ~~~~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~ 88 (191)
T 2p6n_A 54 PPPVLIFAEKKADVDAIHEYLLLKGVE-AVAIHGGK 88 (191)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHHTCC-EEEECTTS
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCC
Confidence 457999999988999999999999986 88888874
No 127
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=73.05 E-value=1.1 Score=29.39 Aligned_cols=38 Identities=18% Similarity=0.189 Sum_probs=26.7
Q ss_pred CcEEEEeCCCc-hHHHHHHHHHH----CCc-cceeeccccHHHH
Q 032621 80 DRLVVGCQSGA-RSLHATADLLG----AGF-KHVSNFGGGHMAW 117 (137)
Q Consensus 80 ~~iv~~c~~g~-ra~~~~~~l~~----~G~-~~v~~l~GG~~~w 117 (137)
..|+|+|.+.. ||..|...|+. .|. +++.+...|...|
T Consensus 5 ~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~ 48 (161)
T 3jvi_A 5 MKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSY 48 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCT
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCc
Confidence 46999999876 88888776654 454 3466666676666
No 128
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=72.99 E-value=5.1 Score=27.02 Aligned_cols=38 Identities=21% Similarity=0.230 Sum_probs=31.9
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
.....++++|++-..+...+..|...|+. +..+.|++.
T Consensus 29 ~~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~lhg~~~ 66 (212)
T 3eaq_A 29 ASPDRAMVFTRTKAETEEIAQGLLRLGHP-AQALHGDLS 66 (212)
T ss_dssp HCCSCEEEECSSHHHHHHHHHHHHHHTCC-EEEECSSSC
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHHcCCC-EEEEECCCC
Confidence 35678999999888889999999999986 888998843
No 129
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=72.88 E-value=6.7 Score=26.02 Aligned_cols=47 Identities=15% Similarity=0.132 Sum_probs=32.5
Q ss_pred HHHHHhhccCCCcEEEEeCCCc--hHHHHHHHHHH---CCccceeeccccHH
Q 032621 69 LKKVRSLCKEEDRLVVGCQSGA--RSLHATADLLG---AGFKHVSNFGGGHM 115 (137)
Q Consensus 69 ~~~~~~~~~~~~~iv~~c~~g~--ra~~~~~~l~~---~G~~~v~~l~GG~~ 115 (137)
.+.+...++++.-+|+.|-.|. .|..+|..|.. .|..++.++-||-.
T Consensus 60 ~~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G~~~i~FvIGGa~ 111 (167)
T 1to0_A 60 GDRILSKISPDAHVIALAIEGKMKTSEELADTIDKLATYGKSKVTFVIGGSL 111 (167)
T ss_dssp HHHHHTTSCTTSEEEEEEEEEEECCHHHHHHHHHHHHTTTCCEEEEEECCSS
T ss_pred HHHHHhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCceEEEEEECCC
Confidence 3344443445544777777776 68999988876 67778999988853
No 130
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=72.78 E-value=4 Score=30.19 Aligned_cols=88 Identities=10% Similarity=0.229 Sum_probs=46.7
Q ss_pred eCHHHHHHHhhC----CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhh--ccCCCcEEEEeCC
Q 032621 15 VDVRAAKNLLES----GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVVGCQS 88 (137)
Q Consensus 15 is~~~~~~~~~~----~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~--~~~~~~iv~~c~~ 88 (137)
-..+++...++. .+.|+++++...|....+.+. ..++|+........-.-..+...+... -+++..+++.|..
T Consensus 50 n~i~dv~~~L~~~h~~~y~V~NL~sE~~Yd~~~f~~~-v~~~p~pD~~~P~~~~l~~~~~~v~~~l~~~~~~~v~vHC~~ 128 (339)
T 3v0d_A 50 NPIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNH-VYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSKG 128 (339)
T ss_dssp EEHHHHHHHHHHHSTTCEEEEEEETTCCCCGGGGTTC-EEEEEECTTSCCCHHHHHHHHHHHHHHHHTCTTCEEEEECSS
T ss_pred CCHHHHHHHHHHhCCCceEEEECCCCCCCChHHcCCe-EEEeccCCCCCCCHHHHHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 456777777754 378999986655655444332 356666432111100001222333222 2455789999998
Q ss_pred Cc-hH-HHHHHHHHHCC
Q 032621 89 GA-RS-LHATADLLGAG 103 (137)
Q Consensus 89 g~-ra-~~~~~~l~~~G 103 (137)
|. |+ ..++.+|...|
T Consensus 129 G~gRtg~~ia~~Li~~~ 145 (339)
T 3v0d_A 129 GKGRTGTLVSSWLLEDG 145 (339)
T ss_dssp SSHHHHHHHHHHHHHTT
T ss_pred CCcchHHHHHHHHHHhc
Confidence 76 54 33455555554
No 131
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=72.56 E-value=0.96 Score=29.67 Aligned_cols=38 Identities=13% Similarity=0.097 Sum_probs=27.2
Q ss_pred CcEEEEeCCCc-hHHHHHHHHHH----CCcc-ceeeccccHHHH
Q 032621 80 DRLVVGCQSGA-RSLHATADLLG----AGFK-HVSNFGGGHMAW 117 (137)
Q Consensus 80 ~~iv~~c~~g~-ra~~~~~~l~~----~G~~-~v~~l~GG~~~w 117 (137)
..|+|+|.+.. ||..+...|+. .|.. ++.+...|...|
T Consensus 6 ~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~ 49 (157)
T 3n8i_A 6 KSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGY 49 (157)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSST
T ss_pred CEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCcc
Confidence 46999999876 88888776654 4554 466666676666
No 132
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=72.42 E-value=4.1 Score=25.34 Aligned_cols=33 Identities=18% Similarity=0.166 Sum_probs=23.5
Q ss_pred cEEEEeCCCc-hHHHHHHHHHHCCccceeeccccH
Q 032621 81 RLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 81 ~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
.|+|+|.+.. ||..+...|+.+.- ++.+...|.
T Consensus 1 ~VLFVC~gN~cRSpmAEa~~~~~~~-~~~v~SAGt 34 (124)
T 1y1l_A 1 KVLFVCIHNTARSVMAEALFNAMAK-SWKAESAGV 34 (124)
T ss_dssp CEEEEESSCSSHHHHHHHHHHTTCS-SCCEEEEES
T ss_pred CEEEEeCCChhHHHHHHHHHHHhcC-CEEEEecCC
Confidence 4899999876 99999999988642 344444443
No 133
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=69.46 E-value=4.6 Score=26.01 Aligned_cols=35 Identities=20% Similarity=0.065 Sum_probs=25.5
Q ss_pred CcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccHH
Q 032621 80 DRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 80 ~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
+.|+|+|.+.. ||..+...|+.+. .++.+...|..
T Consensus 9 ~~VLFVC~gN~cRSpmAEal~r~~~-~~~~v~SAGt~ 44 (150)
T 2wmy_A 9 DSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVG 44 (150)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC-TTSEEEEEETT
T ss_pred CEEEEEcCCchHHHHHHHHHHHHhc-CCCEEEecccc
Confidence 36999999877 9999999988764 23555555553
No 134
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=68.53 E-value=5 Score=24.53 Aligned_cols=32 Identities=16% Similarity=0.166 Sum_probs=22.3
Q ss_pred CCCcEEEEeCCCchHHHHHHHHH----HCCccceeec
Q 032621 78 EEDRLVVGCQSGARSLHATADLL----GAGFKHVSNF 110 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~----~~G~~~v~~l 110 (137)
+..+|+++|..|..+...+..++ +.|++ +.+.
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~-v~i~ 40 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAINEGANLTEVR-VIAN 40 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCS-EEEE
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCc-eEEE
Confidence 44569999999988777776554 46765 4443
No 135
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=68.14 E-value=4.8 Score=24.47 Aligned_cols=26 Identities=19% Similarity=0.310 Sum_probs=18.1
Q ss_pred CcEEEEeCCCchHHH-HH----HHHHHCCcc
Q 032621 80 DRLVVGCQSGARSLH-AT----ADLLGAGFK 105 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~-~~----~~l~~~G~~ 105 (137)
++|+++|.+|.-+.. ++ ..+.+.|++
T Consensus 19 ~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~ 49 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIKMKVENALRQLGVS 49 (110)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 569999999985443 34 356667875
No 136
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=67.60 E-value=4 Score=28.18 Aligned_cols=36 Identities=25% Similarity=0.142 Sum_probs=26.3
Q ss_pred CCcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccH
Q 032621 79 EDRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 79 ~~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
...|+|+|.++. ||..+...|+.+.-+++.+...|.
T Consensus 81 ~~~VLFVCtgN~cRSpmAEal~~~~~~~~~~v~SAGt 117 (213)
T 3t38_A 81 VPQVLFICVHNAGRSQIASALLSHYAGSSVEVRSAGS 117 (213)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHHGGGCEEEEEES
T ss_pred CCEEEEECCCchhHHHHHHHHHHHhccCceEEEeccc
Confidence 456999999876 999998888876444555555553
No 137
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=67.43 E-value=5 Score=26.48 Aligned_cols=35 Identities=20% Similarity=0.065 Sum_probs=26.1
Q ss_pred CcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccHH
Q 032621 80 DRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 80 ~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
..|+|+|.+.. ||..|...|+.+. .++.+...|..
T Consensus 27 ~~VLFVCtgNicRSpmAEal~r~~~-~~~~v~SAGt~ 62 (168)
T 2wja_A 27 DSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVG 62 (168)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHHS-TTSEEEEEETT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecC
Confidence 47999999877 9999999998764 23556555654
No 138
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=67.12 E-value=7.4 Score=30.34 Aligned_cols=47 Identities=26% Similarity=0.265 Sum_probs=33.4
Q ss_pred CCCcEEEEeCCCc---hHHHHHHHHHHCCccceeec-ccc---------HHHHHhCCCcee
Q 032621 78 EEDRLVVGCQSGA---RSLHATADLLGAGFKHVSNF-GGG---------HMAWVQNGLKVK 125 (137)
Q Consensus 78 ~~~~iv~~c~~g~---ra~~~~~~l~~~G~~~v~~l-~GG---------~~~w~~~~~p~~ 125 (137)
+.++|+++|..|. .+..++++|...||+ |.++ .+. +..|.+.+.++.
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKD-VLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSSE-EEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 4678999999876 468889999999996 5432 221 345777776665
No 139
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=66.94 E-value=5.6 Score=26.22 Aligned_cols=35 Identities=20% Similarity=0.142 Sum_probs=25.8
Q ss_pred CcEEEEeCCCc-hHHHHHHHHHHCCccceeeccccHH
Q 032621 80 DRLVVGCQSGA-RSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 80 ~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
+.|+|+|.+.. ||..|...|+.+. +++.+...|..
T Consensus 23 ~~VLFVCtgN~cRSpmAEal~r~~~-~~~~v~SAGt~ 58 (167)
T 2fek_A 23 NNILVVCVGNICRSPTAERLLQRYH-PELKVESAGLG 58 (167)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC-TTCEEEEEETT
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecC
Confidence 36999999877 9999999998764 23555555553
No 140
>3ohg_A Uncharacterized protein from DUF2233 family; structural genomics, unknown function, joint center for STRU genomics, JCSG; HET: MSE; 1.80A {Bacteroides ovatus}
Probab=66.90 E-value=6.6 Score=28.34 Aligned_cols=27 Identities=22% Similarity=0.305 Sum_probs=23.3
Q ss_pred CchHHHHHHHHHHCCccceeeccccHH
Q 032621 89 GARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 89 g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
|..-..++..|+++|..+...||||-.
T Consensus 218 G~tl~ela~~~~~lG~~~AlnLDGGgS 244 (285)
T 3ohg_A 218 GLTLPHLATMMKAVGCYNAINLDGGGS 244 (285)
T ss_dssp CBCHHHHHHHHHHHTCSEEEECCCGGG
T ss_pred CCCHHHHHHHHHHcCCCeEEECCCCcc
Confidence 456789999999999999999999854
No 141
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=66.46 E-value=11 Score=27.63 Aligned_cols=39 Identities=10% Similarity=0.110 Sum_probs=32.8
Q ss_pred ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 76 CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
...+..++++|++-..+...+..|...|+. +..+.|++.
T Consensus 273 ~~~~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~h~~~~ 311 (417)
T 2i4i_A 273 TGKDSLTLVFVETKKGADSLEDFLYHEGYA-CTSIHGDRS 311 (417)
T ss_dssp CCTTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred cCCCCeEEEEECCHHHHHHHHHHHHHCCCC-eeEecCCCC
Confidence 345678999999988899999999999986 888888753
No 142
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=66.32 E-value=8.8 Score=30.38 Aligned_cols=37 Identities=16% Similarity=0.207 Sum_probs=32.5
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
++..++|||++-..+..++..|...|+. +..+.||+.
T Consensus 266 ~~~~~IVf~~sr~~~e~la~~L~~~g~~-~~~~h~~l~ 302 (591)
T 2v1x_A 266 KGQSGIIYCFSQKDSEQVTVSLQNLGIH-AGAYHANLE 302 (591)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred cCCCeEEEeCcHHHHHHHHHHHHHCCCC-EEEecCCCC
Confidence 5678999999988999999999999986 888998863
No 143
>2d7d_A Uvrabc system protein B; helicase, protein-DNA-ADP ternary complex, hydrolase/DNA complex; HET: ADP; 2.10A {Bacillus subtilis} PDB: 2nmv_A* 2fdc_A* 1t5l_A 3uwx_B 1d9z_A* 1d9x_A 2d7d_B* 2nmv_B*
Probab=65.71 E-value=10 Score=30.43 Aligned_cols=46 Identities=17% Similarity=0.214 Sum_probs=36.1
Q ss_pred HHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621 68 FLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 68 ~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
+...+......+..++++|++-.++...+..|.+.|++ +..+.|+.
T Consensus 434 Ll~~l~~~~~~~~~vlVf~~t~~~ae~L~~~L~~~gi~-~~~lh~~~ 479 (661)
T 2d7d_A 434 LIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIK-VNYLHSEI 479 (661)
T ss_dssp HHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTC
T ss_pred HHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHhcCCC-eEEEeCCC
Confidence 34444443456778999999988999999999999985 88888874
No 144
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=64.89 E-value=6.8 Score=24.87 Aligned_cols=31 Identities=16% Similarity=0.250 Sum_probs=26.2
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
+++.|+++++ +|.....++..|++.|...|.
T Consensus 82 ~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~ 115 (153)
T 1vdm_A 82 KDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIK 115 (153)
T ss_dssp BTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEE
T ss_pred CCCEEEEEecccCChHHHHHHHHHHHHcCCCEEE
Confidence 5678999887 788999999999999987664
No 145
>1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hypertherm protein, replication; HET: DNA BOG; 1.50A {Thermus thermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1d2m_A*
Probab=64.18 E-value=9.9 Score=30.54 Aligned_cols=46 Identities=13% Similarity=0.154 Sum_probs=36.0
Q ss_pred HHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621 68 FLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 68 ~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
+...+......+..++++|++-.++...+..|.+.|+. +..+.|++
T Consensus 428 Ll~~l~~~~~~~~~vlVf~~t~~~ae~L~~~L~~~gi~-~~~lh~~~ 473 (664)
T 1c4o_A 428 LMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIR-ARYLHHEL 473 (664)
T ss_dssp HHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTC
T ss_pred HHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCC-ceeecCCC
Confidence 33444443456778999999988999999999999985 78888874
No 146
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=64.07 E-value=8.4 Score=25.05 Aligned_cols=31 Identities=26% Similarity=0.218 Sum_probs=26.9
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
+++.|+++++ +|.....++..|++.|-..|.
T Consensus 119 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~ 152 (175)
T 1vch_A 119 LNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVA 152 (175)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCeEEE
Confidence 6788999988 788999999999999987664
No 147
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=63.91 E-value=5.6 Score=24.93 Aligned_cols=26 Identities=23% Similarity=0.529 Sum_probs=18.0
Q ss_pred CCcEEEEeCCCchHHHH-HH----HHHHCCc
Q 032621 79 EDRLVVGCQSGARSLHA-TA----DLLGAGF 104 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~-~~----~l~~~G~ 104 (137)
-..|+++|.+|.-+... +. .|.+.|+
T Consensus 13 ~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi 43 (125)
T 1vkr_A 13 VRKIIVACDAGMGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp CCEEEECCSSSSHHHHHHHHHHHHHHHHTTC
T ss_pred ccEEEEECCCcHHHHHHHHHHHHHHHHHCCC
Confidence 35799999999855444 33 4556787
No 148
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=63.36 E-value=12 Score=28.92 Aligned_cols=37 Identities=19% Similarity=0.308 Sum_probs=32.4
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
++..+++||++-..+...+..|...|+. +..+.||+.
T Consensus 235 ~~~~~IVf~~sr~~~e~l~~~L~~~g~~-~~~~h~~l~ 271 (523)
T 1oyw_A 235 RGKSGIIYCNSRAKVEDTAARLQSKGIS-AAAYHAGLE 271 (523)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHCCCC-EEEecCCCC
Confidence 5678999999988999999999999986 888998864
No 149
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=63.21 E-value=31 Score=24.55 Aligned_cols=88 Identities=14% Similarity=0.148 Sum_probs=50.1
Q ss_pred CHHHHHHHhhC----C-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCc
Q 032621 16 DVRAAKNLLES----G-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 90 (137)
Q Consensus 16 s~~~~~~~~~~----~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ 90 (137)
+.+++.++++. + .++++|.+.+|.....--|+..+-+-.-.+ .....+ -+....+...++. .++++|-+|.
T Consensus 154 ~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l-~t~~~d-l~~~~~L~~~ip~--~~~vIaesGI 229 (272)
T 3tsm_A 154 DDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNL-RSFEVN-LAVSERLAKMAPS--DRLLVGESGI 229 (272)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCT-TTCCBC-THHHHHHHHHSCT--TSEEEEESSC
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCC-ccCCCC-hHHHHHHHHhCCC--CCcEEEECCC
Confidence 44555554432 4 578999998887653333443232221111 001111 2344455554443 4677888999
Q ss_pred hHHHHHHHHHHCCccce
Q 032621 91 RSLHATADLLGAGFKHV 107 (137)
Q Consensus 91 ra~~~~~~l~~~G~~~v 107 (137)
.+..-+..+.+.|++-|
T Consensus 230 ~t~edv~~l~~~Ga~gv 246 (272)
T 3tsm_A 230 FTHEDCLRLEKSGIGTF 246 (272)
T ss_dssp CSHHHHHHHHTTTCCEE
T ss_pred CCHHHHHHHHHcCCCEE
Confidence 99999999999999743
No 150
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=63.07 E-value=6.5 Score=24.01 Aligned_cols=26 Identities=12% Similarity=0.239 Sum_probs=18.1
Q ss_pred CcEEEEeCCCchHHH-HHH----HHHHCCcc
Q 032621 80 DRLVVGCQSGARSLH-ATA----DLLGAGFK 105 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~-~~~----~l~~~G~~ 105 (137)
++|+++|.+|.-+.. ++. .+.+.|++
T Consensus 22 kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 22 RKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp EEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 469999999985444 444 45567875
No 151
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=62.20 E-value=9.5 Score=24.99 Aligned_cols=32 Identities=19% Similarity=0.053 Sum_probs=26.9
Q ss_pred cCCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 77 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 77 ~~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
.+++.|+++++ +|.....++..|++.|...|.
T Consensus 118 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~ 152 (180)
T 1zn8_A 118 EPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLE 152 (180)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEE
Confidence 36788999987 799999999999999987654
No 152
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=62.18 E-value=10 Score=23.61 Aligned_cols=31 Identities=10% Similarity=-0.003 Sum_probs=22.4
Q ss_pred EEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 82 LVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 82 iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
-+++|..|.-...++..|.+.|++ |.+++--
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~-v~vid~~ 39 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIP-LVVIETS 39 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC-EEEEESC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEECC
Confidence 356666777788888888888875 7766643
No 153
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=61.50 E-value=12 Score=25.47 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=27.2
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCccceeec
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNF 110 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~l 110 (137)
.++.++++++ +|.....+...|++.|.++|+++
T Consensus 123 ~~~~VllvDd~l~TG~T~~~a~~~L~~~G~~~I~~~ 158 (209)
T 1i5e_A 123 EERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKFM 158 (209)
T ss_dssp TTSEEEEECSEESSSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCEEEEEcCCCcCHHHHHHHHHHHHHcCCCEEEEE
Confidence 4567888877 79999999999999999887643
No 154
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=60.64 E-value=14 Score=24.36 Aligned_cols=48 Identities=17% Similarity=0.123 Sum_probs=32.5
Q ss_pred HHHHHhhccCCCcEEEEeCCCc--hHHHHHHHHHH---CCccceeeccccHHHH
Q 032621 69 LKKVRSLCKEEDRLVVGCQSGA--RSLHATADLLG---AGFKHVSNFGGGHMAW 117 (137)
Q Consensus 69 ~~~~~~~~~~~~~iv~~c~~g~--ra~~~~~~l~~---~G~~~v~~l~GG~~~w 117 (137)
.+.+...++++.-+|+.|-.|. .|..+|..|.. .| .++.++-||-.++
T Consensus 55 ~~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G-~~i~FvIGGa~Gl 107 (163)
T 1o6d_A 55 TEDLTNRILPGSFVMVMDKRGEEVSSEEFADFLKDLEMKG-KDITILIGGPYGL 107 (163)
T ss_dssp HHHHHTTCCTTCEEEEEEEEEEECCHHHHHHHHHHHHHHT-CCEEEEECCTTCC
T ss_pred HHHHHHhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcC-CeEEEEEECCCCC
Confidence 3344444555544777777775 68888888765 47 7899999985443
No 155
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=60.05 E-value=19 Score=25.53 Aligned_cols=39 Identities=21% Similarity=0.198 Sum_probs=32.3
Q ss_pred ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 76 CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
......++++|++-..+...+..|...|+. +..+.|++.
T Consensus 235 ~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 273 (367)
T 1hv8_A 235 KNKEFYGLVFCKTKRDTKELASMLRDIGFK-AGAIHGDLS 273 (367)
T ss_dssp CSTTCCEEEECSSHHHHHHHHHHHHHTTCC-EEEECSSSC
T ss_pred hcCCCcEEEEECCHHHHHHHHHHHHhcCCC-eEEeeCCCC
Confidence 345667999999988999999999999986 888888753
No 156
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=59.66 E-value=11 Score=24.67 Aligned_cols=28 Identities=29% Similarity=0.369 Sum_probs=22.9
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
|++...|--...+|..|.+.|++ |.+++
T Consensus 5 V~IIGaGpaGL~aA~~La~~G~~-V~v~E 32 (336)
T 3kkj_A 5 IAIIGTGIAGLSAAQALTAAGHQ-VHLFD 32 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCC-EEEEE
Confidence 34446788889999999999996 88887
No 157
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=59.06 E-value=11 Score=24.93 Aligned_cols=49 Identities=16% Similarity=0.180 Sum_probs=35.6
Q ss_pred cCCCcEEEEeC---CCchHHHHHHHHHHCCcccee---ecc----ccHHHHHhCCCcee
Q 032621 77 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHVS---NFG----GGHMAWVQNGLKVK 125 (137)
Q Consensus 77 ~~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~---~l~----GG~~~w~~~~~p~~ 125 (137)
.+++.|+++++ +|.....++..|++.|.+.|. +++ +|.....+.+.|+.
T Consensus 124 ~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~g~~v~ 182 (190)
T 2dy0_A 124 KPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSY 182 (190)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHHHHTTTCEEE
T ss_pred CCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccCcchHHHHhhCCCcEE
Confidence 36788999988 788999999999999987653 222 35555555566654
No 158
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=59.03 E-value=11 Score=24.98 Aligned_cols=31 Identities=19% Similarity=0.199 Sum_probs=26.4
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
+++.|+++++ +|.....++..|++.|-..|.
T Consensus 97 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~ 130 (185)
T 2geb_A 97 EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLK 130 (185)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEE
Confidence 5678999887 788999999999999987765
No 159
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=58.74 E-value=14 Score=26.60 Aligned_cols=36 Identities=22% Similarity=0.265 Sum_probs=31.0
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
....++++|++-..+...+..|...|+. +..+.|++
T Consensus 27 ~~~~~LVF~~t~~~~~~l~~~L~~~g~~-~~~lhg~l 62 (300)
T 3i32_A 27 SPDRAMVFTRTKAETEEIAQGLLRLGHP-AQALHGDM 62 (300)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHTTTCC-EEEECSCC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence 4678999999888889999999999986 88888884
No 160
>2yjt_D ATP-dependent RNA helicase SRMB, regulator of ribonuclease activity A; hydrolase inhibitor-hydrolase complex, DEAD box RNA helicase; 2.90A {Escherichia coli}
Probab=63.23 E-value=2 Score=27.87 Aligned_cols=37 Identities=22% Similarity=0.180 Sum_probs=30.4
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
.+..++++|++-..+...+..|...|+. +..+.|++.
T Consensus 29 ~~~~~iVF~~~~~~~~~l~~~L~~~~~~-~~~~~g~~~ 65 (170)
T 2yjt_D 29 EATRSIVFVRKRERVHELANWLREAGIN-NCYLEGEMV 65 (170)
Confidence 4467899999888899999999998885 778888754
No 161
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=58.65 E-value=4.2 Score=24.64 Aligned_cols=27 Identities=7% Similarity=0.165 Sum_probs=17.9
Q ss_pred CCcEEEEeCCCchHHHHHHH----HHHCCcc
Q 032621 79 EDRLVVGCQSGARSLHATAD----LLGAGFK 105 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~~~~----l~~~G~~ 105 (137)
.-.|+++|.+|..+..++.. +.+.|++
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~ 34 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNIN 34 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCS
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCC
Confidence 34599999999854355544 4556774
No 162
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=58.62 E-value=12 Score=24.95 Aligned_cols=32 Identities=13% Similarity=0.149 Sum_probs=27.1
Q ss_pred cCCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 77 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 77 ~~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
.+++.|+++++ +|.....++..|++.|...|.
T Consensus 118 ~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~ 152 (197)
T 1y0b_A 118 SDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAG 152 (197)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEE
Confidence 36788999988 799999999999999987654
No 163
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=58.56 E-value=12 Score=23.45 Aligned_cols=29 Identities=14% Similarity=0.244 Sum_probs=22.0
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
+++|..|.-....+..|.+.|++ |.+++-
T Consensus 6 vlI~G~G~vG~~la~~L~~~g~~-V~vid~ 34 (153)
T 1id1_A 6 FIVCGHSILAINTILQLNQRGQN-VTVISN 34 (153)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred EEEECCCHHHHHHHHHHHHCCCC-EEEEEC
Confidence 45556788888888888888986 777654
No 164
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=58.10 E-value=10 Score=27.37 Aligned_cols=36 Identities=19% Similarity=0.207 Sum_probs=31.3
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
+..+++++|++-..+...+..|...|+. +..+.|++
T Consensus 249 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~ 284 (391)
T 1xti_A 249 EFNQVVIFVKSVQRCIALAQLLVEQNFP-AIAIHRGM 284 (391)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHHTTCC-EEEECTTS
T ss_pred CCCcEEEEeCcHHHHHHHHHHHHhCCCc-EEEEeCCC
Confidence 5678999999988899999999999986 88888874
No 165
>1z5z_A Helicase of the SNF2/RAD54 family; hydrolase, recombination, hydrolase-recombination complex; 2.00A {Sulfolobus solfataricus} SCOP: c.37.1.19
Probab=57.77 E-value=15 Score=25.88 Aligned_cols=38 Identities=13% Similarity=-0.043 Sum_probs=30.8
Q ss_pred ccCCCcEEEEeCCCchHHHHHHHHHH-CCccceeeccccH
Q 032621 76 CKEEDRLVVGCQSGARSLHATADLLG-AGFKHVSNFGGGH 114 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~ra~~~~~~l~~-~G~~~v~~l~GG~ 114 (137)
...+.+++|+|+.-.........|.. .|+. +..++|+.
T Consensus 109 ~~~~~kvlIFs~~~~~~~~l~~~L~~~~g~~-~~~l~G~~ 147 (271)
T 1z5z_A 109 LDEGDKIAIFTQFVDMGKIIRNIIEKELNTE-VPFLYGEL 147 (271)
T ss_dssp HHTTCCEEEEESCHHHHHHHHHHHHHHHCSC-CCEECTTS
T ss_pred HhCCCeEEEEeccHHHHHHHHHHHHHhcCCc-EEEEECCC
Confidence 44678899999987788888888887 4986 77889875
No 166
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=57.71 E-value=12 Score=24.66 Aligned_cols=32 Identities=6% Similarity=0.015 Sum_probs=27.0
Q ss_pred cCCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 77 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 77 ~~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
.+++.|+++++ +|.....++..|++.|...|.
T Consensus 120 ~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~ 154 (187)
T 1g2q_A 120 PAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLE 154 (187)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEE
Confidence 36788999988 799999999999999987654
No 167
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=57.54 E-value=17 Score=24.07 Aligned_cols=34 Identities=18% Similarity=0.027 Sum_probs=27.1
Q ss_pred ccCCCcEEEEeCCCch--HHHHHHHHHHCCccceeec
Q 032621 76 CKEEDRLVVGCQSGAR--SLHATADLLGAGFKHVSNF 110 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~r--a~~~~~~l~~~G~~~v~~l 110 (137)
+.+.+.+++++++|.. ....|..+++.|.+ |..+
T Consensus 75 i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~-vIaI 110 (170)
T 3jx9_A 75 LHAVDRVLIFTPDTERSDLLASLARYDAWHTP-YSII 110 (170)
T ss_dssp CCTTCEEEEEESCSCCHHHHHHHHHHHHHTCC-EEEE
T ss_pred CCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCc-EEEE
Confidence 6888999999999874 56778889999987 4433
No 168
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=57.12 E-value=6.7 Score=23.74 Aligned_cols=26 Identities=4% Similarity=-0.046 Sum_probs=18.6
Q ss_pred CcEEEEeCCCchHHHHHH----HHHHCCcc
Q 032621 80 DRLVVGCQSGARSLHATA----DLLGAGFK 105 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~~~~----~l~~~G~~ 105 (137)
++|+++|.+|..+..++. .+++.|++
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~~~~~gi~ 33 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAEKYEVP 33 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHHHSCCS
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHCCCC
Confidence 469999999986545544 45668885
No 169
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=56.92 E-value=12 Score=24.56 Aligned_cols=32 Identities=13% Similarity=0.035 Sum_probs=26.6
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCccceee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN 109 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~ 109 (137)
+++.|+++++ +|.....++..|++.|-..|..
T Consensus 94 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~ 128 (183)
T 1hgx_A 94 EGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKV 128 (183)
T ss_dssp TTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEE
Confidence 5678999887 7888999999999999877653
No 170
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=56.88 E-value=16 Score=24.13 Aligned_cols=32 Identities=22% Similarity=0.208 Sum_probs=27.0
Q ss_pred cCCCcEEEEeC---CCchHHHHHHHHHHCCcc--cee
Q 032621 77 KEEDRLVVGCQ---SGARSLHATADLLGAGFK--HVS 108 (137)
Q Consensus 77 ~~~~~iv~~c~---~g~ra~~~~~~l~~~G~~--~v~ 108 (137)
.+++.|+++++ +|.....++..|++.|.. .|.
T Consensus 115 ~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~ 151 (186)
T 1l1q_A 115 GPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIY 151 (186)
T ss_dssp CTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEE
Confidence 36788999988 788899999999999988 654
No 171
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=56.80 E-value=21 Score=26.15 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=30.6
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
.++.+++++|++-..+...+..|...|+. +..+.|
T Consensus 359 ~~~~k~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~g 393 (494)
T 1wp9_A 359 KQNSKIIVFTNYRETAKKIVNELVKDGIK-AKRFVG 393 (494)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCC-EEEECC
T ss_pred CCCCeEEEEEccHHHHHHHHHHHHHcCCC-cEEEec
Confidence 46788999999888899999999999986 888888
No 172
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=56.48 E-value=32 Score=25.12 Aligned_cols=27 Identities=22% Similarity=0.309 Sum_probs=17.6
Q ss_pred HHHHHHhhccCCCcEEEEeCCCc-hHHHH
Q 032621 68 FLKKVRSLCKEEDRLVVGCQSGA-RSLHA 95 (137)
Q Consensus 68 ~~~~~~~~~~~~~~iv~~c~~g~-ra~~~ 95 (137)
|...+.. ++++..|++.|..|. |+..+
T Consensus 203 fl~~v~~-l~~~~~i~vHC~aG~GRTgt~ 230 (314)
T 3mmj_A 203 FLAFYRT-LPQDAWLHFHSEAGVGRTTAF 230 (314)
T ss_dssp HHHHHHT-CCTTCEEEEECSSSSHHHHHH
T ss_pred HHHHHHH-cCCCCCEEEECCCCCchHHHH
Confidence 3333333 466788999999887 65444
No 173
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=56.16 E-value=15 Score=26.80 Aligned_cols=34 Identities=18% Similarity=0.107 Sum_probs=28.5
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCccceeecc
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
+++.++++++ +|.....++..|++.|..+|+.+.
T Consensus 216 ~gk~VlLVDDiitTG~Tl~~aa~~Lk~~Ga~~V~~~~ 252 (317)
T 1dku_A 216 EGKTAILIDDIIDTAGTITLAANALVENGAKEVYACC 252 (317)
T ss_dssp TTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEEecccCCCHHHHHHHHHHHHcCCcEEEEEE
Confidence 4678899887 789999999999999998876544
No 174
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=55.76 E-value=13 Score=24.40 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=26.0
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCC-cccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAG-FKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G-~~~v~ 108 (137)
+++.|+++++ +|.....++..|++.| ...|.
T Consensus 95 ~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~ 129 (181)
T 1ufr_A 95 TGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIY 129 (181)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEE
T ss_pred CCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEE
Confidence 5678999887 7999999999999999 77665
No 175
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=55.72 E-value=24 Score=24.54 Aligned_cols=51 Identities=16% Similarity=0.242 Sum_probs=36.8
Q ss_pred ccCCCcEEEEeC---CCchHHHHHHHHHHCCcccee---ecc----ccHHHHHhCCCceec
Q 032621 76 CKEEDRLVVGCQ---SGARSLHATADLLGAGFKHVS---NFG----GGHMAWVQNGLKVKA 126 (137)
Q Consensus 76 ~~~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~---~l~----GG~~~w~~~~~p~~~ 126 (137)
+.++++|+|+++ +|.....++..|++.|.+.+. +++ +|.....+.|.|+..
T Consensus 134 ~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~v~s 194 (234)
T 3m3h_A 134 AEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVASYS 194 (234)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred cCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCCEEE
Confidence 357888999887 788999999999999986543 222 345566667777654
No 176
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=55.72 E-value=14 Score=24.84 Aligned_cols=32 Identities=19% Similarity=0.157 Sum_probs=26.9
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCccceee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN 109 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~ 109 (137)
+++.|+++++ +|.....++..|++.|-..|.+
T Consensus 119 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v 153 (208)
T 1wd5_A 119 KGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVV 153 (208)
T ss_dssp TTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEE
Confidence 5678999988 6888889999999999887754
No 177
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=55.50 E-value=19 Score=25.83 Aligned_cols=38 Identities=13% Similarity=0.050 Sum_probs=32.0
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
....+++++|++-..+...+..|...|++ +..+.|++.
T Consensus 241 ~~~~~~lvf~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~ 278 (395)
T 3pey_A 241 MTIGSSIIFVATKKTANVLYGKLKSEGHE-VSILHGDLQ 278 (395)
T ss_dssp TTSSEEEEECSCHHHHHHHHHHHHHTTCC-CEEECTTSC
T ss_pred ccCCCEEEEeCCHHHHHHHHHHHHhcCCc-EEEeCCCCC
Confidence 35577999999888899999999999986 888988753
No 178
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=55.35 E-value=12 Score=27.25 Aligned_cols=89 Identities=15% Similarity=0.291 Sum_probs=43.2
Q ss_pred eeCHHHHHHHhhC----CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhc--cCCCcEEEEeC
Q 032621 14 TVDVRAAKNLLES----GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC--KEEDRLVVGCQ 87 (137)
Q Consensus 14 ~is~~~~~~~~~~----~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~--~~~~~iv~~c~ 87 (137)
.-...++...++. ...|+++.....|....+.. .+.++|+........-....|...+...+ +++.+|+++|.
T Consensus 41 r~~i~~Vv~~l~~~~~~~~~v~nl~~e~~y~~~~~~~-~~~~~~~~D~~~P~~~~l~~~~~~i~~~l~~~~~~~VlVHC~ 119 (324)
T 1d5r_A 41 RNNIDDVVRFLDSKHKNHYKIYNLCAERHYDTAKFNC-RVAQYPFEDHNPPQLELIKPFCEDLDQWLSEDDNHVAAIHCK 119 (324)
T ss_dssp CCBHHHHHHHHHHHSSSCEEEEEEESSCCCCTTSCSS-CEEEEEECTTSCCCHHHHHHHHHHHHHHHTTTSCSEEEEECS
T ss_pred ccCHHHHHHHHHhcCCCcEEEEEcCCCCCCChHHhCC-eEEEEeecCCCCCcHHHHHHHHHHHHHHHHhcCCCeEEEECC
Confidence 3456667666653 26788886543344333322 24566664221111000012333333222 34578999999
Q ss_pred CCc-hHHHH-HHHHHHCC
Q 032621 88 SGA-RSLHA-TADLLGAG 103 (137)
Q Consensus 88 ~g~-ra~~~-~~~l~~~G 103 (137)
.|. |+..+ +..|...+
T Consensus 120 aG~gRTGt~ia~yL~~~~ 137 (324)
T 1d5r_A 120 AGKGRTGVMICAYLLHRG 137 (324)
T ss_dssp SSSHHHHHHHHHHHHHHT
T ss_pred CCCChhHHHHHHHHHHhc
Confidence 886 65433 44444433
No 179
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=55.32 E-value=13 Score=24.98 Aligned_cols=31 Identities=19% Similarity=0.199 Sum_probs=26.3
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
+++.|+++++ +|.....++..|++.|-..|.
T Consensus 117 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~ 150 (205)
T 1yfz_A 117 EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLK 150 (205)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEE
T ss_pred CcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEE
Confidence 5678999987 788999999999999987765
No 180
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=55.19 E-value=16 Score=22.48 Aligned_cols=30 Identities=23% Similarity=0.159 Sum_probs=20.9
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
+++|..|.-....+..|.+.|++ |..++--
T Consensus 9 v~I~G~G~iG~~la~~L~~~g~~-V~~id~~ 38 (141)
T 3llv_A 9 YIVIGSEAAGVGLVRELTAAGKK-VLAVDKS 38 (141)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEESC
T ss_pred EEEECCCHHHHHHHHHHHHCCCe-EEEEECC
Confidence 45555677777788888888885 7666543
No 181
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=54.09 E-value=14 Score=25.03 Aligned_cols=31 Identities=10% Similarity=-0.021 Sum_probs=26.7
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
+++.|+++++ +|.....++..|++.|-..|.
T Consensus 117 ~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~ 150 (211)
T 1pzm_A 117 ENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLK 150 (211)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEECCccccHHHHHHHHHHHHhcCCCEEE
Confidence 5778999988 799999999999999987665
No 182
>3jux_A Protein translocase subunit SECA; protein translocation, ATPase, conformational change, peptide binding, ATP-binding, cell inner membrane; HET: ADP; 3.10A {Thermotoga maritima} PDB: 3din_A*
Probab=54.02 E-value=16 Score=30.28 Aligned_cols=38 Identities=18% Similarity=0.131 Sum_probs=33.0
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
..+.+++++|++-..|...+..|.+.|++ +.+|.|+..
T Consensus 472 ~~gqpVLVFt~S~e~sE~Ls~~L~~~Gi~-~~vLhgkq~ 509 (822)
T 3jux_A 472 KKGQPVLVGTTSIEKSELLSSMLKKKGIP-HQVLNAKYH 509 (822)
T ss_dssp HHTCCEEEEESSHHHHHHHHHHHHTTTCC-CEEECSCHH
T ss_pred hCCCCEEEEECCHHHHHHHHHHHHHCCCC-EEEeeCCch
Confidence 35789999999999999999999999997 778888743
No 183
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=53.60 E-value=14 Score=24.11 Aligned_cols=31 Identities=10% Similarity=0.237 Sum_probs=26.1
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCC-cccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAG-FKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G-~~~v~ 108 (137)
+++.|+++++ +|.....++..|++.| ...|.
T Consensus 97 ~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~ 131 (181)
T 1a3c_A 97 TDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQ 131 (181)
T ss_dssp TTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEE
T ss_pred CCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEE
Confidence 5678999887 7999999999999997 77665
No 184
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=53.44 E-value=11 Score=27.40 Aligned_cols=37 Identities=11% Similarity=0.142 Sum_probs=31.4
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
....++++|++-..+...+..|...|+. +..+.|++.
T Consensus 257 ~~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 293 (400)
T 1s2m_A 257 QINQAIIFCNSTNRVELLAKKITDLGYS-CYYSHARMK 293 (400)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHHTCC-EEEECTTSC
T ss_pred CCCcEEEEEecHHHHHHHHHHHHhcCCC-eEEecCCCC
Confidence 5568999999888899999999999986 888888753
No 185
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=53.36 E-value=15 Score=25.27 Aligned_cols=32 Identities=3% Similarity=-0.114 Sum_probs=27.0
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCccceee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN 109 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~ 109 (137)
+++.|+|+++ +|.....++..|++.|-..|.+
T Consensus 102 ~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v 136 (220)
T 1tc1_A 102 EGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKT 136 (220)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEE
Confidence 5678999987 7999999999999999877653
No 186
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=52.89 E-value=20 Score=24.79 Aligned_cols=33 Identities=18% Similarity=0.248 Sum_probs=26.7
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCccceeec
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNF 110 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~l 110 (137)
.++.++++++ +|.....+...|++.|.+++.++
T Consensus 135 ~gr~VilvDd~laTG~Tl~~ai~~L~~~G~~~I~~~ 170 (221)
T 1o5o_A 135 DDKEVFLLDPMLATGVSSIKAIEILKENGAKKITLV 170 (221)
T ss_dssp TTCEEEEECSEESSSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEEE
Confidence 3567888877 78899999999999999887644
No 187
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=52.84 E-value=14 Score=21.06 Aligned_cols=27 Identities=11% Similarity=0.090 Sum_probs=22.8
Q ss_pred ccCCCcEEEEeCCCchHHHHHHHHHHC
Q 032621 76 CKEEDRLVVGCQSGARSLHATADLLGA 102 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~ra~~~~~~l~~~ 102 (137)
+..+++|++.|.++..+......++++
T Consensus 47 IAGDDTIlvi~r~~~~a~~l~~~i~~l 73 (78)
T 1xxa_A 47 IAGDDTIFTTPANGFTVKDLYEAILEL 73 (78)
T ss_dssp EECSSEEEEEECTTCCHHHHHHHHHTT
T ss_pred EecCCEEEEEECCHHHHHHHHHHHHHH
Confidence 456889999999999999998888764
No 188
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=52.65 E-value=13 Score=24.73 Aligned_cols=37 Identities=22% Similarity=0.162 Sum_probs=24.7
Q ss_pred CcEEEEeCCCc-hHHHHHHHHHH----CCccceeeccccHHHH
Q 032621 80 DRLVVGCQSGA-RSLHATADLLG----AGFKHVSNFGGGHMAW 117 (137)
Q Consensus 80 ~~iv~~c~~g~-ra~~~~~~l~~----~G~~~v~~l~GG~~~w 117 (137)
-+|+|+|.+.. ||..|...|+. .|- ++.+..-|..+|
T Consensus 35 mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~-~~~v~SAGt~~~ 76 (180)
T 4egs_A 35 MRVLFVCTGNTCRSPMAEGIFNAKSKALGK-DWEAKSAGVFAP 76 (180)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHHHHTTC-CCEEEEEETTCC
T ss_pred eEEEEEeCCCcccCHHHHHHHHHHHHhcCC-ceEEEEeeecCc
Confidence 45999999877 98888777653 453 355555555444
No 189
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=52.48 E-value=14 Score=27.90 Aligned_cols=30 Identities=23% Similarity=0.161 Sum_probs=23.9
Q ss_pred CcEEEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 80 DRLVVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
++|||+ .+|.....+|..|.+.|++ |.+|+
T Consensus 2 k~VvVI-GaG~~GL~aA~~La~~G~~-V~VlE 31 (501)
T 4dgk_A 2 KPTTVI-GAGFGGLALAIRLQAAGIP-VLLLE 31 (501)
T ss_dssp CCEEEE-CCHHHHHHHHHHHHHTTCC-EEEEC
T ss_pred CCEEEE-CCcHHHHHHHHHHHHCCCc-EEEEc
Confidence 345555 6788888999999999996 88886
No 190
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=52.47 E-value=11 Score=24.89 Aligned_cols=37 Identities=22% Similarity=0.354 Sum_probs=24.7
Q ss_pred cEEEEeCCCc-hHHHHHHHHHH----CCcc-ceeeccccHHHH
Q 032621 81 RLVVGCQSGA-RSLHATADLLG----AGFK-HVSNFGGGHMAW 117 (137)
Q Consensus 81 ~iv~~c~~g~-ra~~~~~~l~~----~G~~-~v~~l~GG~~~w 117 (137)
.|+|+|.+.. ||..|-..|+. .|.. ++.+-.-|..+|
T Consensus 20 kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~ 62 (173)
T 4etm_A 20 SVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGW 62 (173)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCT
T ss_pred EEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccC
Confidence 5999998766 88888776654 4553 355555555555
No 191
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=52.41 E-value=13 Score=27.07 Aligned_cols=36 Identities=17% Similarity=0.272 Sum_probs=31.3
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
...+++++|++-..+...+..|...|+. +..+.|++
T Consensus 265 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~ 300 (412)
T 3fht_A 265 TIAQAMIFCHTRKTASWLAAELSKEGHQ-VALLSGEM 300 (412)
T ss_dssp SSSEEEEECSSHHHHHHHHHHHHHTTCC-CEEECTTS
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHhCCCe-EEEecCCC
Confidence 4568999999988999999999999986 88899884
No 192
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=52.08 E-value=19 Score=25.69 Aligned_cols=31 Identities=16% Similarity=0.179 Sum_probs=26.7
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
+++.++++++ +|.....++..|++.|...|+
T Consensus 204 ~Gk~VlIVDDii~TG~Tl~~aa~~Lk~~Ga~~V~ 237 (284)
T 1u9y_A 204 KDRDVFIVDDIISTGGTMATAVKLLKEQGAKKII 237 (284)
T ss_dssp TTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEE
T ss_pred CCCEEEEEecccCchHHHHHHHHHHHHCCCcEEE
Confidence 4678999887 788999999999999998775
No 193
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=51.97 E-value=19 Score=27.52 Aligned_cols=34 Identities=26% Similarity=0.147 Sum_probs=29.0
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCccceeecc
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
+++.|+++++ +|.....++..|++.|-+.|+.+.
T Consensus 337 ~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~ 373 (459)
T 1ao0_A 337 EGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKI 373 (459)
T ss_dssp TTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEE
Confidence 5788999998 688999999999999998776544
No 194
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=51.60 E-value=20 Score=24.09 Aligned_cols=49 Identities=18% Similarity=0.312 Sum_probs=35.5
Q ss_pred cCCCcEEEEeC---CCchHHHHHHHHHHCCccceee---c---cccHHHHHhCCCcee
Q 032621 77 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN---F---GGGHMAWVQNGLKVK 125 (137)
Q Consensus 77 ~~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~---l---~GG~~~w~~~~~p~~ 125 (137)
.+++.|+++++ +|.....++..|++.|.+.|.+ + .+|.....+.+.|+.
T Consensus 109 ~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~~~~l~~~g~~v~ 166 (205)
T 2wns_A 109 NPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRLH 166 (205)
T ss_dssp CTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECCSSHHHHHHTTTCEEE
T ss_pred CCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcCcchHHHHHHcCCeEE
Confidence 46788999988 7889999999999999876532 1 245556655666653
No 195
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=51.22 E-value=21 Score=23.26 Aligned_cols=44 Identities=23% Similarity=0.268 Sum_probs=30.4
Q ss_pred HHHhhccCCCcEEEEeCCCc--hHHHHHHHHHH---CCccceeeccccHHH
Q 032621 71 KVRSLCKEEDRLVVGCQSGA--RSLHATADLLG---AGFKHVSNFGGGHMA 116 (137)
Q Consensus 71 ~~~~~~~~~~~iv~~c~~g~--ra~~~~~~l~~---~G~~~v~~l~GG~~~ 116 (137)
.+...++++ .+|+.|-.|. .|...|..|.. .| .++.++-||-.+
T Consensus 59 ~il~~i~~~-~vi~Ld~~Gk~~sS~~fA~~l~~~~~~g-~~i~FvIGG~~G 107 (155)
T 1ns5_A 59 QMLAAAGKN-RIVTLDIPGKPWDTPQLAAELERWKLDG-RDVSLLIGGPEG 107 (155)
T ss_dssp HHHHHHTTS-EEEEEEEEEECCCHHHHHHHHHHHHHHC-SCEEEEECBTTB
T ss_pred HHHHhcCCC-cEEEEcCCCCcCCHHHHHHHHHHHHhcC-CeEEEEEECCCC
Confidence 343444554 5777777775 68888888765 57 689999998543
No 196
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=50.98 E-value=13 Score=20.78 Aligned_cols=26 Identities=15% Similarity=0.307 Sum_probs=21.8
Q ss_pred ccCCCcEEEEeCCCchHHHHHHHHHH
Q 032621 76 CKEEDRLVVGCQSGARSLHATADLLG 101 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~ra~~~~~~l~~ 101 (137)
+..+++|++.|.++..+......+.+
T Consensus 44 IAGDDTIlvi~r~~~~a~~l~~~i~~ 69 (71)
T 1b4b_A 44 ICGDDTCLIICRTPKDAKKVSNQLLS 69 (71)
T ss_dssp EECSSEEEEEESSHHHHHHHHHHHHT
T ss_pred EeeCCEEEEEECCHHHHHHHHHHHHH
Confidence 55689999999999988888887764
No 197
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=50.92 E-value=14 Score=20.99 Aligned_cols=26 Identities=8% Similarity=0.098 Sum_probs=22.2
Q ss_pred ccCCCcEEEEeCCCchHHHHHHHHHH
Q 032621 76 CKEEDRLVVGCQSGARSLHATADLLG 101 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~ra~~~~~~l~~ 101 (137)
+..+++|++.|.+...+......+.+
T Consensus 52 IAGDDTIlvi~r~~~~a~~l~~~l~~ 77 (79)
T 2zfz_A 52 IAGDDTILVVAREPTTGAQLAGMFEN 77 (79)
T ss_dssp EECSSEEEEEECTTCCHHHHHHHHHH
T ss_pred EecCCEEEEEECCHHHHHHHHHHHHh
Confidence 55789999999999999888888765
No 198
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=50.61 E-value=14 Score=26.95 Aligned_cols=37 Identities=22% Similarity=0.262 Sum_probs=31.3
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
....++++|++-..+...+..|...|+. +..+.|++.
T Consensus 275 ~~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~h~~~~ 311 (410)
T 2j0s_A 275 TITQAVIFCNTKRKVDWLTEKMREANFT-VSSMHGDMP 311 (410)
T ss_dssp TSSEEEEECSSHHHHHHHHHHHHHTTCC-CEEECTTSC
T ss_pred CCCcEEEEEcCHHHHHHHHHHHHhCCCc-eEEeeCCCC
Confidence 3457999999888899999999999986 888898853
No 199
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=50.56 E-value=23 Score=24.74 Aligned_cols=50 Identities=16% Similarity=0.228 Sum_probs=35.4
Q ss_pred ccCCCcEEEEeC---CCchHHHHHHHHHHCCcccee---ecc----ccHHHHHhCCCcee
Q 032621 76 CKEEDRLVVGCQ---SGARSLHATADLLGAGFKHVS---NFG----GGHMAWVQNGLKVK 125 (137)
Q Consensus 76 ~~~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~---~l~----GG~~~w~~~~~p~~ 125 (137)
+.+++.|+|+++ +|.....++..|++.|.+.+. +++ +|.....+.+.++.
T Consensus 146 ~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~~~ 205 (243)
T 3dez_A 146 VTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKLV 205 (243)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEE
T ss_pred cCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhcCCCEE
Confidence 357888999887 788999999999999986543 233 34455555566554
No 200
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=49.32 E-value=17 Score=23.90 Aligned_cols=50 Identities=22% Similarity=0.234 Sum_probs=35.6
Q ss_pred cCCCcEEEEeC---CCchHHHHHHHHHHCCccceee---c---cccHHHHHhCCCceec
Q 032621 77 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN---F---GGGHMAWVQNGLKVKA 126 (137)
Q Consensus 77 ~~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~---l---~GG~~~w~~~~~p~~~ 126 (137)
.+++.|+++++ +|.....++..|++.|.+.|.+ + .+|.....+.+.|+..
T Consensus 112 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~g~~~l~~~g~~~~s 170 (180)
T 2p1z_A 112 VVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRATGAADVIAAEGLEYRY 170 (180)
T ss_dssp CTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CCCHHHHHHTTTCCEEE
T ss_pred CCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcchHHHHHhcCCeEEE
Confidence 46788999988 7888999999999999876542 2 2455555555666543
No 201
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=48.90 E-value=20 Score=24.11 Aligned_cols=31 Identities=19% Similarity=0.236 Sum_probs=26.3
Q ss_pred cCCCcEEEEeC---CCchHHHHHHHHHHCCccce
Q 032621 77 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHV 107 (137)
Q Consensus 77 ~~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v 107 (137)
.+++.|+++++ +|.....++..|++.|.+.|
T Consensus 115 ~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v 148 (211)
T 2aee_A 115 LKGQKMVIIEDLISTGGSVLDAAAAASREGADVL 148 (211)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEE
T ss_pred CCcCEEEEEeecccchHHHHHHHHHHHHCCCcEE
Confidence 46788999887 78899999999999998764
No 202
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=48.81 E-value=24 Score=27.29 Aligned_cols=33 Identities=18% Similarity=0.095 Sum_probs=28.5
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCccceeec
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNF 110 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~l 110 (137)
+++.|+|+++ +|.....++..|++.|-+.|+++
T Consensus 358 ~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~ 393 (504)
T 1ecf_A 358 RDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLA 393 (504)
T ss_dssp TTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEE
T ss_pred CCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEE
Confidence 6788999998 68899999999999999877644
No 203
>1tf5_A Preprotein translocase SECA subunit; ATPase, helicase, translocation, secretion, protein transport; 2.18A {Bacillus subtilis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1tf2_A 3iqy_A 1m6n_A 1m74_A* 3iqm_A 3jv2_A* 2ibm_A* 3dl8_A 1sx0_A 1sx1_A 1tm6_A
Probab=48.50 E-value=18 Score=30.16 Aligned_cols=38 Identities=13% Similarity=0.066 Sum_probs=33.1
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
..+.+++++|++-..|...+..|...|++ +..|.|...
T Consensus 430 ~~~~pvLVft~s~~~se~Ls~~L~~~gi~-~~vLhg~~~ 467 (844)
T 1tf5_A 430 MTGQPVLVGTVAVETSELISKLLKNKGIP-HQVLNAKNH 467 (844)
T ss_dssp HHTCCEEEEESCHHHHHHHHHHHHTTTCC-CEEECSSCH
T ss_pred hcCCcEEEEECCHHHHHHHHHHHHHCCCC-EEEeeCCcc
Confidence 35678999999999999999999999997 778888754
No 204
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=48.40 E-value=21 Score=23.62 Aligned_cols=31 Identities=13% Similarity=-0.047 Sum_probs=26.1
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
+++.++++++ +|.....++..|++.|-..+.
T Consensus 94 ~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~ 127 (181)
T 2ywu_A 94 HGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVR 127 (181)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEE
Confidence 5678999887 799999999999999987654
No 205
>2fsf_A Preprotein translocase SECA subunit; ATPase, DNA-RNA helicase, protein translocation, protein transport; 2.00A {Escherichia coli} PDB: 2fsg_A* 2fsh_A* 2fsi_A* 2vda_A 3bxz_A*
Probab=48.32 E-value=32 Score=28.80 Aligned_cols=38 Identities=21% Similarity=0.221 Sum_probs=33.2
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
.++.+++++|.+-..|...+..|...|++ +.+|.|...
T Consensus 439 ~~gqpvLVft~sie~se~Ls~~L~~~gi~-~~vLnak~~ 476 (853)
T 2fsf_A 439 AKGQPVLVGTISIEKSELVSNELTKAGIK-HNVLNAKFH 476 (853)
T ss_dssp TTTCCEEEEESSHHHHHHHHHHHHHTTCC-CEECCTTCH
T ss_pred cCCCCEEEEECcHHHHHHHHHHHHHCCCC-EEEecCChh
Confidence 46789999999999999999999999997 778888754
No 206
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=47.92 E-value=20 Score=24.44 Aligned_cols=32 Identities=16% Similarity=0.087 Sum_probs=26.0
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCccceee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN 109 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~ 109 (137)
.++.++++++ +|.....+...|++.|.+++.+
T Consensus 120 ~~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~~ 154 (208)
T 2e55_A 120 KGKIVVILDPMLATGGTLEVALREILKHSPLKVKS 154 (208)
T ss_dssp BTSEEEEECSEESSSHHHHHHHHHHHTTCBSEEEE
T ss_pred CCCEEEEECCccccHHHHHHHHHHHHHcCCCEEEE
Confidence 3567888877 7889999999999999887763
No 207
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=47.66 E-value=22 Score=26.45 Aligned_cols=83 Identities=12% Similarity=0.242 Sum_probs=44.2
Q ss_pred HHHHHHHhhC----CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCCh---HHHHHHHhh--ccCCCcEEEEeC
Q 032621 17 VRAAKNLLES----GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNP---DFLKKVRSL--CKEEDRLVVGCQ 87 (137)
Q Consensus 17 ~~~~~~~~~~----~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~iv~~c~ 87 (137)
.+++...++. .+.|++++. ..|....+.+. ..++|+...... +.. ++...+... -+++..++++|.
T Consensus 49 i~~v~~~L~~~H~~~y~V~NLse-~~Yd~~~f~~~-V~~~~~pD~~~P---~l~~l~~~~~~i~~~l~~~~~~~v~VHC~ 123 (361)
T 3n0a_A 49 VDDIRSFLDSRHLDHYTVYNLSP-KSYRTAKFHSR-VSECSWPIRQAP---SLHNLFAVCRNMYNWLLQNPKNVCVVHCL 123 (361)
T ss_dssp CHHHHHHHHHHHTTCEEEEECSS-SCCGGGSCGGG-EEECCCCSSSCC---CHHHHHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred HHHHHHHHHHhCCCeEEEEECCC-CCCChhhcCCc-EEEeecCCCCCC---CHHHHHHHHHHHHHHHhcCCCCeEEEEeC
Confidence 3556666543 388999964 46665555543 245565322111 111 222222221 245667999999
Q ss_pred CCc-hH-HHHHHHHHHCCc
Q 032621 88 SGA-RS-LHATADLLGAGF 104 (137)
Q Consensus 88 ~g~-ra-~~~~~~l~~~G~ 104 (137)
.|. |+ ..++.+|...|.
T Consensus 124 aG~GRtg~~ia~~Li~~~~ 142 (361)
T 3n0a_A 124 DGRAASSILVGAMFIFCNL 142 (361)
T ss_dssp SCTHHHHHHHHHHHHHTTS
T ss_pred CCCccHHHHHHHHHHHhcC
Confidence 876 54 444555655554
No 208
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=47.44 E-value=25 Score=23.90 Aligned_cols=31 Identities=16% Similarity=-0.015 Sum_probs=26.1
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
+++.|+++++ +|.....+...|++.|-+.|.
T Consensus 115 ~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~ 148 (204)
T 3hvu_A 115 EGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVK 148 (204)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEE
T ss_pred CCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEE
Confidence 5788999887 788999999999999987654
No 209
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=47.39 E-value=48 Score=23.74 Aligned_cols=38 Identities=24% Similarity=0.260 Sum_probs=25.9
Q ss_pred HHHHHHhh--ccCCCcEEEEeCCCchHHHHHHHHHHC----Ccc
Q 032621 68 FLKKVRSL--CKEEDRLVVGCQSGARSLHATADLLGA----GFK 105 (137)
Q Consensus 68 ~~~~~~~~--~~~~~~iv~~c~~g~ra~~~~~~l~~~----G~~ 105 (137)
+.+.+... +.+++++++.+.+|.-|..++..|.+. |++
T Consensus 11 ~~~~i~~~~l~~~~~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~ 54 (317)
T 1wy5_A 11 VLALQNDEKIFSGERRVLIAFSGGVDSVVLTDVLLKLKNYFSLK 54 (317)
T ss_dssp HHHHHHHHCSCSSCCEEEEECCSSHHHHHHHHHHHHSTTTTTCS
T ss_pred HHHHHHHcCCCCCCCEEEEEecchHHHHHHHHHHHHHHHHcCCC
Confidence 44444433 566777888888888888888777764 665
No 210
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=47.31 E-value=26 Score=24.09 Aligned_cols=29 Identities=38% Similarity=0.489 Sum_probs=24.1
Q ss_pred cEEEEeCCCc-hHHHHHHHHHHCCccceeec
Q 032621 81 RLVVGCQSGA-RSLHATADLLGAGFKHVSNF 110 (137)
Q Consensus 81 ~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l 110 (137)
++-++|.+.. ||-.+=..|++.||+ |.-+
T Consensus 27 r~avVCaSN~NRSMEAH~~L~k~Gf~-V~Sf 56 (214)
T 4h3k_B 27 RVAVVSSSNQNRSMEAHNILSKRGFS-VRSF 56 (214)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHTTCE-EEEE
T ss_pred eEEEECCCCcchhHHHHHHHHHCCCc-eEee
Confidence 4889999875 999999999999995 6543
No 211
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=46.66 E-value=22 Score=24.30 Aligned_cols=31 Identities=23% Similarity=0.095 Sum_probs=25.9
Q ss_pred CCcEEEEeC---CCchHHHHHHHHHHCCccceee
Q 032621 79 EDRLVVGCQ---SGARSLHATADLLGAGFKHVSN 109 (137)
Q Consensus 79 ~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~ 109 (137)
++.++++++ +|.....+...|++.|.+++.+
T Consensus 123 ~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~~ 156 (208)
T 1v9s_A 123 ERRAFLLDPMLATGGSASLALSLLKERGATGVKL 156 (208)
T ss_dssp GSCEEEECSEESSSHHHHHHHHHHHHTTCCSCEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCEEEE
Confidence 467888877 7889999999999999988763
No 212
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=46.57 E-value=25 Score=24.28 Aligned_cols=32 Identities=16% Similarity=0.120 Sum_probs=26.9
Q ss_pred cCCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 77 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 77 ~~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
.+++.|+++++ +|.....++..|++.|.+.|.
T Consensus 136 ~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~ 170 (236)
T 1qb7_A 136 GKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVE 170 (236)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEE
Confidence 46788999987 799999999999999987653
No 213
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=46.36 E-value=22 Score=24.33 Aligned_cols=31 Identities=3% Similarity=-0.002 Sum_probs=26.4
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
+++.|+++++ +|.....+...|++.|-..|.
T Consensus 133 ~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~ 166 (225)
T 2jbh_A 133 AGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIK 166 (225)
T ss_dssp TTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEE
Confidence 6788999987 788999999999999987664
No 214
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=46.32 E-value=15 Score=26.69 Aligned_cols=37 Identities=16% Similarity=0.118 Sum_probs=28.9
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
...+++++|++-..+..++..|...|+. +..+.|++.
T Consensus 279 ~~~~~lvf~~~~~~~~~l~~~l~~~~~~-~~~~h~~~~ 315 (414)
T 3eiq_A 279 TITQAVIFINTRRKVDWLTEKMHARDFT-VSAMHGDMD 315 (414)
T ss_dssp CCSSCEEECSCHHHHHHHHHHHHTTTCC-CEEC---CH
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHhcCCe-EEEecCCCC
Confidence 4567899999888899999999999986 888998864
No 215
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=46.25 E-value=22 Score=23.90 Aligned_cols=31 Identities=19% Similarity=0.210 Sum_probs=26.0
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCC-cccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAG-FKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G-~~~v~ 108 (137)
+++.|+++++ +|.....+...|++.| ...|.
T Consensus 111 ~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~ 145 (201)
T 1w30_A 111 DDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQ 145 (201)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEE
T ss_pred CCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEE
Confidence 5678999887 7999999999999999 77664
No 216
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=45.91 E-value=45 Score=19.70 Aligned_cols=38 Identities=11% Similarity=0.059 Sum_probs=28.1
Q ss_pred HHHHHHHhhccCCCcEEEEeC------CCchHHHHHHHHHHCCcc
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQ------SGARSLHATADLLGAGFK 105 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~------~g~ra~~~~~~l~~~G~~ 105 (137)
+..+.+...+ ...+|++|.. ....+..+..+|.+.|++
T Consensus 6 ~~~~~v~~~i-~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~ 49 (109)
T 3ipz_A 6 QLKDTLEKLV-NSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVP 49 (109)
T ss_dssp HHHHHHHHHH-TSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHH-ccCCEEEEEecCCCCCCChhHHHHHHHHHHcCCC
Confidence 5556665553 5567888877 367899999999999875
No 217
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=45.87 E-value=46 Score=19.87 Aligned_cols=86 Identities=16% Similarity=0.280 Sum_probs=50.8
Q ss_pred HHHHHhhC-CCEEEecCChHHHhc--cCCCCceeeCccccccCCCCCCCChHHHHHHHhh---ccCCCcEEEEeCCCchH
Q 032621 19 AAKNLLES-GYGYLDVRTAEEFKE--GHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL---CKEEDRLVVGCQSGARS 92 (137)
Q Consensus 19 ~~~~~~~~-~~~viDvR~~~e~~~--g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~---~~~~~~iv~~c~~g~ra 92 (137)
.+.+.+++ +..+--||++.|... ..+-.. .|...... .+++.++.+..-.. +...--|++|++...|-
T Consensus 17 kfkdiikkngfkvrtvrspqelkdsieelvkk--ynativvv----vvddkewaekairfvkslgaqvliiiydqdqnrl 90 (134)
T 2l69_A 17 KFKDIIKKNGFKVRTVRSPQELKDSIEELVKK--YNATIVVV----VVDDKEWAEKAIRFVKSLGAQVLIIIYDQDQNRL 90 (134)
T ss_dssp HHHHHHHHTTCEEEEECSHHHHHHHHHHHTTC--CCCEEEEE----ECSSHHHHHHHHHHHHHHCCCCEEEEECSCHHHH
T ss_pred HHHHHHHhcCceEEEecCHHHHHHHHHHHHHH--hCCeEEEE----EEccHHHHHHHHHHHHhcCCeEEEEEEeCchhHH
Confidence 34555554 588999999988753 111111 12111000 11223444433222 45566689999888899
Q ss_pred HHHHHHHHHCCccceeecc
Q 032621 93 LHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 93 ~~~~~~l~~~G~~~v~~l~ 111 (137)
....+..+..||+ |..+.
T Consensus 91 eefsrevrrrgfe-vrtvt 108 (134)
T 2l69_A 91 EEFSREVRRRGFE-VRTVT 108 (134)
T ss_dssp HHHHHHHHHTTCC-EEEES
T ss_pred HHHHHHHHhcCce-EEEec
Confidence 9999999999997 76554
No 218
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=45.72 E-value=15 Score=21.11 Aligned_cols=26 Identities=15% Similarity=0.289 Sum_probs=21.6
Q ss_pred ccCCCcEEEEeCCCchHHHHHHHHHH
Q 032621 76 CKEEDRLVVGCQSGARSLHATADLLG 101 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~ra~~~~~~l~~ 101 (137)
+..+++|++.|.++..+......+.+
T Consensus 56 IAGDDTIlvi~r~~~~a~~l~~~l~~ 81 (83)
T 2p5m_A 56 ICGDDTILIICRTPEDTEGVKNRLLE 81 (83)
T ss_dssp EECSSEEEEECSSHHHHHHHHHHHHT
T ss_pred EecCCEEEEEECCHHHHHHHHHHHHH
Confidence 45688999999999888888887764
No 219
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=45.61 E-value=42 Score=23.96 Aligned_cols=65 Identities=14% Similarity=0.085 Sum_probs=36.2
Q ss_pred eCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
+.+-.+.+.|.+.+...-....+......+...|+.+.+|..+..+|...+..|++-+.++..+.
T Consensus 24 v~~K~E~~~ptgS~K~R~a~~~l~~a~~~g~~~vv~~ssGN~g~alA~~a~~~G~~~~i~~p~~~ 88 (318)
T 2rkb_A 24 VFLKCENVQPSGSFKIRGIGHFCQEMAKKGCRHLVCSSGGNAGIAAAYAARKLGIPATIVLPEST 88 (318)
T ss_dssp EEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCEEEECCCSHHHHHHHHHHHHHTCCEEEEECTTC
T ss_pred EEEEecCCCCCCCHHHHHHHHHHHHHHHcCCCEEEEECCchHHHHHHHHHHHcCCCEEEEECCCC
Confidence 34444444444443322222233332234455666677788888888888889997444555543
No 220
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=45.60 E-value=23 Score=24.39 Aligned_cols=31 Identities=13% Similarity=0.154 Sum_probs=26.5
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
+++.|+|+++ +|.....+...|++.|-..|.
T Consensus 141 ~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~ 174 (233)
T 1fsg_A 141 RDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMR 174 (233)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEE
Confidence 5788999987 799999999999999987654
No 221
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=45.57 E-value=25 Score=22.96 Aligned_cols=48 Identities=17% Similarity=0.222 Sum_probs=34.4
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCcccee---ecc---ccHHHHHhCCCcee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS---NFG---GGHMAWVQNGLKVK 125 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~---~l~---GG~~~w~~~~~p~~ 125 (137)
+++.|+++++ +|.....++..|++.|...+. +++ +|.....+.+.|+.
T Consensus 105 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~~~~~~l~~~g~~~~ 161 (178)
T 2yzk_A 105 PKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGEGAGELLARMGVRLV 161 (178)
T ss_dssp CSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCSSHHHHHHTTTCEEE
T ss_pred CCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcCHHHHHHHcCCcEE
Confidence 7788999988 799999999999999976442 333 44555554565553
No 222
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=44.84 E-value=25 Score=23.42 Aligned_cols=31 Identities=13% Similarity=0.048 Sum_probs=26.1
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
+++.++++++ +|.....+...|++.|-..+.
T Consensus 93 ~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~ 126 (186)
T 3o7m_A 93 TGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALK 126 (186)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEE
T ss_pred CcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEE
Confidence 5678999887 799999999999999987554
No 223
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=44.77 E-value=25 Score=23.14 Aligned_cols=31 Identities=10% Similarity=-0.006 Sum_probs=26.0
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
+++.++++++ +|.....+...|++.|-..+.
T Consensus 90 ~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~ 123 (177)
T 3ohp_A 90 KGKDVLLVEDIIDTGNTLNKVKEILALREPKSIR 123 (177)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEE
Confidence 5788999887 788999999999999987654
No 224
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=44.70 E-value=41 Score=18.88 Aligned_cols=14 Identities=14% Similarity=-0.263 Sum_probs=5.9
Q ss_pred HHHHHCCccceeecc
Q 032621 97 ADLLGAGFKHVSNFG 111 (137)
Q Consensus 97 ~~l~~~G~~~v~~l~ 111 (137)
..+....++ +.+++
T Consensus 39 ~~l~~~~~d-lii~d 52 (119)
T 2j48_A 39 DQLDLLQPI-VILMA 52 (119)
T ss_dssp HHHHHHCCS-EEEEE
T ss_pred HHHHhcCCC-EEEEe
Confidence 334444443 54443
No 225
>1nkt_A Preprotein translocase SECA 1 subunit; preprotein translocation, ATPase, transmembrane transport, helicase-like motor domain; HET: ADP; 2.60A {Mycobacterium tuberculosis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1nl3_A
Probab=44.41 E-value=34 Score=28.84 Aligned_cols=38 Identities=11% Similarity=0.069 Sum_probs=33.2
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
..+.++++.|.+-..|...+..|...|++ +.+|.|...
T Consensus 458 ~~gqpvLVft~Sie~sE~Ls~~L~~~Gi~-~~vLnak~~ 495 (922)
T 1nkt_A 458 AKGQPVLIGTTSVERSEYLSRQFTKRRIP-HNVLNAKYH 495 (922)
T ss_dssp HTTCCEEEEESCHHHHHHHHHHHHHTTCC-CEEECSSCH
T ss_pred hcCCcEEEEECCHHHHHHHHHHHHHCCCC-EEEecCChh
Confidence 46789999999999999999999999997 778888754
No 226
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=43.94 E-value=55 Score=23.84 Aligned_cols=63 Identities=10% Similarity=0.102 Sum_probs=39.4
Q ss_pred eCccccccCCCCCCCChHHHHHHHhh-----ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSL-----CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
+.+..+.+++.+.+...-....+... +.+++..|+-+.+|..+..+|...+.+|++-+.++..
T Consensus 52 IylK~E~lnptGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~ 119 (344)
T 3vc3_A 52 VAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPS 119 (344)
T ss_dssp EEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred EEEEecCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECC
Confidence 67777777888776532222222222 3344556666677888888898888899873334433
No 227
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=43.58 E-value=27 Score=25.62 Aligned_cols=44 Identities=18% Similarity=0.162 Sum_probs=32.3
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCccceeec------cc-cHHHHHhCC
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNF------GG-GHMAWVQNG 121 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~l------~G-G~~~w~~~~ 121 (137)
+++.++++++ +|.....++..|++.|-.+|+.+ .+ +.....+.+
T Consensus 212 ~gk~viIVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~~~~a~e~l~~~~ 265 (326)
T 3s5j_B 212 KDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNAC 265 (326)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHHHHSC
T ss_pred CCCEEEEEccccCCcHHHHHHHHHHHHcCCCEEEEEEEecccCchHHHHHhhCC
Confidence 4677888876 78899999999999999887643 23 355555443
No 228
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=43.26 E-value=46 Score=19.68 Aligned_cols=38 Identities=13% Similarity=0.057 Sum_probs=19.3
Q ss_pred CCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHH
Q 032621 79 EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAW 117 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w 117 (137)
...|+++++...........|...||. |.....+-.++
T Consensus 15 ~~~ilivdd~~~~~~~l~~~L~~~g~~-v~~~~~~~~al 52 (138)
T 2b4a_A 15 PFRVTLVEDEPSHATLIQYHLNQLGAE-VTVHPSGSAFF 52 (138)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCE-EEEESSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHHcCCE-EEEeCCHHHHH
Confidence 344555554444555555556666663 54444444443
No 229
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=43.07 E-value=23 Score=23.66 Aligned_cols=29 Identities=10% Similarity=0.088 Sum_probs=17.5
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
|++|..|.-+...+..|.+.|++ |.+++-
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~-v~vid~ 31 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYG-VVIINK 31 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCC-EEEEES
T ss_pred EEEECCCHHHHHHHHHHHhCCCe-EEEEEC
Confidence 44555566666666666666664 555553
No 230
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=42.83 E-value=24 Score=24.08 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=25.5
Q ss_pred CCcEEEEeC---CCchHHHHHHHHHHCCccceee
Q 032621 79 EDRLVVGCQ---SGARSLHATADLLGAGFKHVSN 109 (137)
Q Consensus 79 ~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~ 109 (137)
++.++++++ +|.....+...|++.|.+++.+
T Consensus 123 ~r~VilvDd~laTG~T~~~ai~~L~~~G~~~I~~ 156 (208)
T 2ehj_A 123 ERMALIVDPMLATGGSVIATIDLLKKAGCSSIKV 156 (208)
T ss_dssp GCEEEEEEEEESSCHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCEEEE
Confidence 467888877 7889999999999999887663
No 231
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=42.77 E-value=31 Score=25.21 Aligned_cols=33 Identities=21% Similarity=0.156 Sum_probs=27.6
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCccceeec
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSNF 110 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~l 110 (137)
+++.++++++ +|.....++..|++.|-..|+.+
T Consensus 215 ~gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~ 250 (319)
T 3dah_A 215 EGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAY 250 (319)
T ss_dssp CCSEEEEEEEEESSCHHHHHHHHHHHHTTCSCEEEE
T ss_pred CCCEEEEEecccCchHHHHHHHHHHHHcCCCEEEEE
Confidence 5778888876 78899999999999999887643
No 232
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=42.71 E-value=29 Score=23.70 Aligned_cols=30 Identities=20% Similarity=0.118 Sum_probs=25.6
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCccce
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHV 107 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v 107 (137)
+++.|+++++ +|.....++..|++.|.+.+
T Consensus 124 ~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v 156 (226)
T 2ps1_A 124 ENKRILIIDDVMTAGTAINEAFEIISNAKGQVV 156 (226)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEE
T ss_pred CcCEEEEEEecccChHHHHHHHHHHHHcCCeEE
Confidence 6788999988 78889999999999998654
No 233
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=42.20 E-value=42 Score=20.95 Aligned_cols=29 Identities=14% Similarity=0.004 Sum_probs=22.3
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
|+++..|.-....+..|...|++ |.+++-
T Consensus 22 v~IiG~G~iG~~la~~L~~~g~~-V~vid~ 50 (155)
T 2g1u_A 22 IVIFGCGRLGSLIANLASSSGHS-VVVVDK 50 (155)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred EEEECCCHHHHHHHHHHHhCCCe-EEEEEC
Confidence 44556788888899999999984 777654
No 234
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=41.51 E-value=34 Score=23.76 Aligned_cols=24 Identities=29% Similarity=0.361 Sum_probs=20.3
Q ss_pred CCchHHHHHHHHHHCCccceeeccc
Q 032621 88 SGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 88 ~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
+|......|..|...|++ |.++.|
T Consensus 28 SG~mG~aiA~~~~~~Ga~-V~lv~~ 51 (232)
T 2gk4_A 28 TGHLGKIITETLLSAGYE-VCLITT 51 (232)
T ss_dssp CCHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred CCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 577889999999999996 877776
No 235
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=41.36 E-value=50 Score=19.20 Aligned_cols=13 Identities=8% Similarity=-0.156 Sum_probs=5.8
Q ss_pred HHHHCCccceeecc
Q 032621 98 DLLGAGFKHVSNFG 111 (137)
Q Consensus 98 ~l~~~G~~~v~~l~ 111 (137)
.+....+ ++.+++
T Consensus 41 ~l~~~~~-dlvllD 53 (122)
T 3gl9_A 41 KLSEFTP-DLIVLX 53 (122)
T ss_dssp HHTTBCC-SEEEEC
T ss_pred HHHhcCC-CEEEEe
Confidence 3444444 355554
No 236
>3o8b_A HCV NS3 protease/helicase; ntpase, RNA, translocation, protein-RNA compl protease/ntpase/helicase, hydrolase; 1.95A {Hepatitis c virus} PDB: 3o8c_A* 3o8d_A* 3o8r_A* 4b71_A* 4b73_A* 4b74_A* 4b76_A* 4b75_A* 4a92_A* 1cu1_A 4b6e_A* 4b6f_A* 2zjo_A* 1a1v_A* 1hei_A 3kqn_A* 3kql_A* 3kqu_A* 3kqh_A 3kqk_A ...
Probab=41.10 E-value=22 Score=28.80 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=31.9
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
....++++|++-..+...+..|.+.|++ +..+.|++.
T Consensus 395 ~~~~vLVFv~Tr~~ae~la~~L~~~g~~-v~~lHG~l~ 431 (666)
T 3o8b_A 395 RGGRHLIFCHSKKKCDELAAKLSGLGIN-AVAYYRGLD 431 (666)
T ss_dssp SSSEEEEECSCHHHHHHHHHHHHTTTCC-EEEECTTSC
T ss_pred cCCcEEEEeCCHHHHHHHHHHHHhCCCc-EEEecCCCC
Confidence 4567999999988999999999999986 888888764
No 237
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=41.09 E-value=40 Score=25.86 Aligned_cols=37 Identities=8% Similarity=0.054 Sum_probs=30.9
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHC---CccceeeccccH
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGA---GFKHVSNFGGGH 114 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~---G~~~v~~l~GG~ 114 (137)
.++..+++||++-..+..++..|... |+. +..+.|++
T Consensus 337 ~~~~~~iVF~~s~~~~~~l~~~L~~~~~~~~~-v~~~h~~~ 376 (563)
T 3i5x_A 337 DSNYKAIIFAPTVKFTSFLCSILKNEFKKDLP-ILEFHGKI 376 (563)
T ss_dssp TTCCEEEEECSCHHHHHHHHHHHHHHHTTTSC-EEEESTTS
T ss_pred CCCCcEEEEcCcHHHHHHHHHHHHHhccCCce-EEEecCCC
Confidence 56778999999988889999999876 775 88888875
No 238
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=40.81 E-value=33 Score=20.53 Aligned_cols=29 Identities=10% Similarity=0.076 Sum_probs=18.3
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
|++|..|.-....+..|.+.|++ |.+++-
T Consensus 7 i~IiG~G~iG~~~a~~L~~~g~~-v~~~d~ 35 (140)
T 1lss_A 7 IIIAGIGRVGYTLAKSLSEKGHD-IVLIDI 35 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred EEEECCCHHHHHHHHHHHhCCCe-EEEEEC
Confidence 34445566677777777777764 665543
No 239
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=40.77 E-value=48 Score=21.67 Aligned_cols=39 Identities=23% Similarity=0.176 Sum_probs=27.8
Q ss_pred CCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHH
Q 032621 79 EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAW 117 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w 117 (137)
...|+++++...........|...|+..|.....|-.++
T Consensus 61 ~~~ILiVdDd~~~~~~l~~~L~~~g~~~v~~a~~~~eal 99 (206)
T 3mm4_A 61 GKRVLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEAL 99 (206)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTCSEEEEESSHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCCeeeeeCCHHHHH
Confidence 346777777766777778888888985577766665554
No 240
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=40.62 E-value=39 Score=22.96 Aligned_cols=30 Identities=30% Similarity=0.319 Sum_probs=24.4
Q ss_pred CcEEEEeCCCc-hHHHHHHHHHHCCccceeec
Q 032621 80 DRLVVGCQSGA-RSLHATADLLGAGFKHVSNF 110 (137)
Q Consensus 80 ~~iv~~c~~g~-ra~~~~~~l~~~G~~~v~~l 110 (137)
-.+-++|.+.. ||-.+=..|++.||+ |.-+
T Consensus 10 l~~avVCaSN~NRSMEaH~~L~k~G~~-V~Sf 40 (198)
T 3p9y_A 10 LAVAVVDSSNMNRSMEAHNFLAKKGFN-VRSY 40 (198)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHTTCE-EEEE
T ss_pred ceEEEEcCCCCcccHHHHHHHHhCCCc-eeec
Confidence 46889999866 999999999999995 5533
No 241
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=40.44 E-value=35 Score=26.31 Aligned_cols=29 Identities=14% Similarity=0.064 Sum_probs=19.2
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHCCcc
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGAGFK 105 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~ 105 (137)
.+.++|++...+|.-|..++.+|++.|++
T Consensus 8 ~~~~KVvVA~SGGlDSSvll~~L~e~G~e 36 (455)
T 1k92_A 8 PVGQRIGIAFSGGLDTSAALLWMRQKGAV 36 (455)
T ss_dssp CTTSEEEEECCSSHHHHHHHHHHHHTTCE
T ss_pred cCCCeEEEEEcChHHHHHHHHHHHHcCCE
Confidence 44556666666677777777777777765
No 242
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=40.24 E-value=42 Score=23.83 Aligned_cols=29 Identities=31% Similarity=0.523 Sum_probs=17.9
Q ss_pred HHHHHHhhccCCCcEEEEeCCCc-hHHHHH
Q 032621 68 FLKKVRSLCKEEDRLVVGCQSGA-RSLHAT 96 (137)
Q Consensus 68 ~~~~~~~~~~~~~~iv~~c~~g~-ra~~~~ 96 (137)
|...+......+.+||++|..|. |+....
T Consensus 198 ~i~~v~~~~~~~~PivVHCsaGvGRTGtfi 227 (287)
T 2b49_A 198 FVNYVRSLRVDSEPVLVHCSAGIGRTGVLV 227 (287)
T ss_dssp HHHHHHHHCCTTCCEEEECSSSSHHHHHHH
T ss_pred HHHHHHHhccCCCcEEEEcCCCCcHHHHHH
Confidence 33333333334689999999886 665543
No 243
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=40.08 E-value=37 Score=23.30 Aligned_cols=41 Identities=15% Similarity=0.215 Sum_probs=29.6
Q ss_pred CCcEEEEeC---CCchHHHHHHHHHHCCc--cceeecc-----ccHHHHHh
Q 032621 79 EDRLVVGCQ---SGARSLHATADLLGAGF--KHVSNFG-----GGHMAWVQ 119 (137)
Q Consensus 79 ~~~iv~~c~---~g~ra~~~~~~l~~~G~--~~v~~l~-----GG~~~w~~ 119 (137)
++.+++++. +|.....+...|++.|. ++|.++. .|+....+
T Consensus 129 ~~~VilvD~~laTG~T~~~ai~~L~~~G~pe~~I~~~~~vaa~egl~~l~~ 179 (217)
T 3dmp_A 129 DRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMFLALVAAPEGVQVFQD 179 (217)
T ss_dssp TCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEEEECSEECHHHHHHHHH
T ss_pred CCEEEEEcCcccccHHHHHHHHHHHHcCCCcCeEEEEEEEeCHHHHHHHHH
Confidence 466777776 78899999999999999 7765432 35555544
No 244
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=39.97 E-value=26 Score=23.81 Aligned_cols=31 Identities=10% Similarity=-0.015 Sum_probs=25.8
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
+++.|+++++ +|.....+...|++.|-..|.
T Consensus 125 ~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~ 158 (217)
T 1z7g_A 125 TGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVK 158 (217)
T ss_dssp TTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEE
Confidence 5678999887 788888899999999987654
No 245
>3mwy_W Chromo domain-containing protein 1; SWI2/SNF2 ATPase, double chromodomains, hydrolase; HET: ATG; 3.70A {Saccharomyces cerevisiae}
Probab=39.94 E-value=44 Score=27.35 Aligned_cols=39 Identities=15% Similarity=0.004 Sum_probs=32.2
Q ss_pred ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 76 CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
...+.+++|+|+.-.........|...|++ +..++|+..
T Consensus 569 ~~~g~kvLIFsq~~~~ld~L~~~L~~~g~~-~~~i~G~~~ 607 (800)
T 3mwy_W 569 KKDGHRVLIFSQMVRMLDILGDYLSIKGIN-FQRLDGTVP 607 (800)
T ss_dssp TTTTCCEEEEESCHHHHHHHHHHHHHHTCC-CEEESTTSC
T ss_pred hhCCCeEEEEechHHHHHHHHHHHHhCCCC-EEEEeCCCC
Confidence 456778999999877788888999999996 778899853
No 246
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=39.50 E-value=54 Score=23.82 Aligned_cols=64 Identities=20% Similarity=0.257 Sum_probs=37.5
Q ss_pred eCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
+.+-.+.+.+.+.+.+.-....+......+...|+.+.+|..+..+|...+..|++-+.++..+
T Consensus 49 i~~K~E~~~ptGS~KdR~a~~~l~~a~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~i~~p~~ 112 (352)
T 2zsj_A 49 IYLKYEGLNPTGSFKDRGMTLAISKAVEAGKRAVICASTGNTSASAAAYAARAGLRAYVLLPKG 112 (352)
T ss_dssp EEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred EEEEECCCCCCccHHHHHHHHHHHHHHhcCCCEEEEeCCchHHHHHHHHHHhcCCcEEEEECCC
Confidence 4445555555554443222223333233445566667788888888888888999744455544
No 247
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=39.15 E-value=22 Score=27.12 Aligned_cols=52 Identities=15% Similarity=0.178 Sum_probs=34.7
Q ss_pred HHHHHHHhhccC-CCcEEEEeCCCchHHHHHHHHHH--CCccceeeccccHHHHH
Q 032621 67 DFLKKVRSLCKE-EDRLVVGCQSGARSLHATADLLG--AGFKHVSNFGGGHMAWV 118 (137)
Q Consensus 67 ~~~~~~~~~~~~-~~~iv~~c~~g~ra~~~~~~l~~--~G~~~v~~l~GG~~~w~ 118 (137)
++.+.+.+..+. ...-+++|++|..|-.+|-.+.. .|-+++..+.|+|.+|.
T Consensus 111 ~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t 165 (456)
T 4atq_A 111 AVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRT 165 (456)
T ss_dssp HHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSS
T ss_pred HHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCcc
Confidence 455566655433 34568889999988877776654 35566778888776553
No 248
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=38.98 E-value=37 Score=24.34 Aligned_cols=31 Identities=13% Similarity=0.201 Sum_probs=26.2
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
+++.++++++ +|.....++..|++.|-+.|+
T Consensus 202 ~gk~vliVDDii~TG~Tl~~a~~~L~~~Ga~~v~ 235 (286)
T 3lrt_A 202 NGKKLLIVDDIISTGGTIAKSSGLLREKGASKIY 235 (286)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEE
T ss_pred CcCEEEEEeccccccHHHHHHHHHHHhCCCCEEE
Confidence 5677888876 788999999999999988765
No 249
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=38.96 E-value=56 Score=25.01 Aligned_cols=51 Identities=12% Similarity=0.076 Sum_probs=31.8
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHH-----HCCc---cceeeccccHHHH
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLL-----GAGF---KHVSNFGGGHMAW 117 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~-----~~G~---~~v~~l~GG~~~w 117 (137)
++.+++.+..+.+-.-|++|++|..|-..|-.+. ..|. .++..+.|||.++
T Consensus 115 ~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~ 173 (473)
T 4e3q_A 115 MLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGV 173 (473)
T ss_dssp HHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCS
T ss_pred HHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCC
Confidence 4556666665545556899999988766665543 2343 3466677766543
No 250
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=38.89 E-value=34 Score=25.56 Aligned_cols=32 Identities=13% Similarity=-0.033 Sum_probs=27.1
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCccceee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVSN 109 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~~ 109 (137)
+++.++++++ +|.....++..|++.|-+.|+.
T Consensus 271 ~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~ 305 (379)
T 2ji4_A 271 GGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFV 305 (379)
T ss_dssp TTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEE
Confidence 5678888877 7889999999999999987753
No 251
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=38.86 E-value=88 Score=22.02 Aligned_cols=46 Identities=17% Similarity=0.165 Sum_probs=29.9
Q ss_pred HHHHHHhh-cc-CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621 68 FLKKVRSL-CK-EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 68 ~~~~~~~~-~~-~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
|...+.+. ++ +++++++. ..|.-|..++..|.+.|..++++++--.
T Consensus 112 f~~~L~~~g~~~~~~~~lil-GaGGaarai~~aL~~~g~~~i~i~nRt~ 159 (269)
T 3tum_A 112 FLGAAHKHGFEPAGKRALVI-GCGGVGSAIAYALAEAGIASITLCDPST 159 (269)
T ss_dssp HHHHHHHTTCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEECSCH
T ss_pred HHHHHHHhCCCcccCeEEEE-ecHHHHHHHHHHHHHhCCCeEEEeCCCH
Confidence 45555443 33 44556555 4566777777888999998888876543
No 252
>3sqw_A ATP-dependent RNA helicase MSS116, mitochondrial; RECA fold, RNA dependent ATPase, RNA helicase; HET: ANP; 1.91A {Saccharomyces cerevisiae S288C}
Probab=38.77 E-value=45 Score=25.90 Aligned_cols=37 Identities=8% Similarity=0.054 Sum_probs=30.9
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHC---CccceeeccccH
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGA---GFKHVSNFGGGH 114 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~---G~~~v~~l~GG~ 114 (137)
.++..++++|++-..+..++..|... |+. +..+.|++
T Consensus 286 ~~~~~~iVF~~t~~~~~~l~~~L~~~~~~~~~-v~~~hg~~ 325 (579)
T 3sqw_A 286 DSNYKAIIFAPTVKFTSFLCSILKNEFKKDLP-ILEFHGKI 325 (579)
T ss_dssp TTCCEEEEECSSHHHHHHHHHHHHHHHTTTSC-EEEESTTS
T ss_pred CCCCcEEEECCcHHHHHHHHHHHHHhhcCCCc-EEEecCCC
Confidence 55678999999988899999999876 775 88888884
No 253
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=38.70 E-value=87 Score=21.99 Aligned_cols=45 Identities=16% Similarity=0.336 Sum_probs=29.1
Q ss_pred HHHHHHhh-ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 68 FLKKVRSL-CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 68 ~~~~~~~~-~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
|...+... ...+++++++. .|.-+..++..|...|..+|+++.--
T Consensus 107 ~~~~l~~~~~~~~~~vlvlG-aGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 107 IVKLIEKYHLNKNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp HHHHHHHTTCCTTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred HHHHHHHhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 44444433 33455666664 56666777777889999888887654
No 254
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=38.46 E-value=56 Score=23.87 Aligned_cols=64 Identities=20% Similarity=0.193 Sum_probs=38.4
Q ss_pred eCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
+.+-.+.+.+.+.+.+.-....+......+...|+.+.+|..+..+|...+..|++-+.++..+
T Consensus 55 i~~K~E~~~ptgSfKdR~a~~~l~~a~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~ 118 (360)
T 2d1f_A 55 IHLKVEGLNPTGSFKDRGMTMAVTDALAHGQRAVLCASTGNTSASAAAYAARAGITCAVLIPQG 118 (360)
T ss_dssp EEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHTCEEEEEECSS
T ss_pred EEEEECCCCCCcCHHHHHHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEEcCC
Confidence 5555555666555543222223333333455666667788888888888888999744455544
No 255
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=38.43 E-value=34 Score=25.69 Aligned_cols=28 Identities=21% Similarity=0.115 Sum_probs=22.4
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
|++..+|.....+|..|.+.|++ |.+|+
T Consensus 14 vvVIGaG~~GL~aA~~La~~G~~-V~vlE 41 (453)
T 2bcg_G 14 VIVLGTGITECILSGLLSVDGKK-VLHID 41 (453)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCe-EEEEe
Confidence 44457788999999999999986 77765
No 256
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=38.34 E-value=57 Score=18.79 Aligned_cols=14 Identities=0% Similarity=-0.263 Sum_probs=6.6
Q ss_pred HHHHHCCccceeecc
Q 032621 97 ADLLGAGFKHVSNFG 111 (137)
Q Consensus 97 ~~l~~~G~~~v~~l~ 111 (137)
..+....++ +.+++
T Consensus 40 ~~~~~~~~d-lii~D 53 (120)
T 3f6p_A 40 EMVEELQPD-LILLD 53 (120)
T ss_dssp HHHHTTCCS-EEEEE
T ss_pred HHHhhCCCC-EEEEe
Confidence 344444443 55554
No 257
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=38.06 E-value=27 Score=26.10 Aligned_cols=29 Identities=21% Similarity=0.368 Sum_probs=18.1
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHCCcc
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGAGFK 105 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~ 105 (137)
.+.++|++...+|.-|..++..|++.|++
T Consensus 15 ~~~~kVvVa~SGGvDSsv~a~lL~~~G~~ 43 (380)
T 2der_A 15 ETAKKVIVGMSGGVDSSVSAWLLQQQGYQ 43 (380)
T ss_dssp --CCEEEEECCSCSTTHHHHHHHHTTCCE
T ss_pred CCCCEEEEEEEChHHHHHHHHHHHHcCCe
Confidence 34455666666666777777777777765
No 258
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=37.99 E-value=62 Score=19.09 Aligned_cols=42 Identities=12% Similarity=0.100 Sum_probs=29.0
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceeec
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 110 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l 110 (137)
...+.+.++ ..+..+.+..+.......+..+++..||+ +...
T Consensus 42 ~tkkaL~~l-~~Ge~L~Vl~dd~~a~~dI~~~~~~~G~~-v~~~ 83 (98)
T 1jdq_A 42 ETKRALQNM-KPGEILEVWIDYPMSKERIPETVKKLGHE-VLEI 83 (98)
T ss_dssp HHHHHHHTC-CTTCEEEEEESSCTHHHHHHHHHHHSSCC-EEEE
T ss_pred HHHHHHHhC-CCCCEEEEEECCccHHHHHHHHHHHCCCE-EEEE
Confidence 344455544 67777777777666677888899999997 5433
No 259
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=37.81 E-value=46 Score=20.37 Aligned_cols=25 Identities=16% Similarity=0.173 Sum_probs=11.9
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCcc
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFK 105 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~ 105 (137)
+|+++.+...-.......|...||+
T Consensus 10 rILiVdD~~~~~~~l~~~L~~~G~~ 34 (123)
T 2lpm_A 10 RVLVVEDESMIAMLIEDTLCELGHE 34 (123)
T ss_dssp CEEEESSSTTTSHHHHHHHHHHCCC
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCE
Confidence 3455544444444444455555554
No 260
>1yks_A Genome polyprotein [contains: flavivirin protease NS3 catalytic subunit]; helicase, flavivirus, DEAD-BOX, ATPase, rtpase, hydrolase; 1.80A {Yellow fever virus} SCOP: c.37.1.14 c.37.1.14 PDB: 1ymf_A*
Probab=37.80 E-value=36 Score=25.60 Aligned_cols=34 Identities=18% Similarity=-0.041 Sum_probs=29.4
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
...+++++|++-..+...+..|...|++ +..+.|
T Consensus 176 ~~~~~lVF~~s~~~a~~l~~~L~~~~~~-v~~lhg 209 (440)
T 1yks_A 176 DKRPTAWFLPSIRAANVMAASLRKAGKS-VVVLNR 209 (440)
T ss_dssp CCSCEEEECSCHHHHHHHHHHHHHTTCC-EEECCS
T ss_pred cCCCEEEEeCCHHHHHHHHHHHHHcCCC-EEEecc
Confidence 3568999999988899999999999985 888887
No 261
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=37.68 E-value=42 Score=25.89 Aligned_cols=48 Identities=21% Similarity=0.340 Sum_probs=31.8
Q ss_pred ccCCCcEEEEeCCCc---hHHHHHHHHHHCCccceeec-cc---------cHHHHHhCCCcee
Q 032621 76 CKEEDRLVVGCQSGA---RSLHATADLLGAGFKHVSNF-GG---------GHMAWVQNGLKVK 125 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~---ra~~~~~~l~~~G~~~v~~l-~G---------G~~~w~~~~~p~~ 125 (137)
+++.++|+++|..|. .+..++++|... |+ |.++ .+ -+..|.+.+.++.
T Consensus 43 ~~~~~~v~VlcG~GNNGGDGlv~AR~L~~~-~~-V~v~~~~~~~~~~a~~~~~~~~~~g~~~~ 103 (475)
T 3k5w_A 43 ASLGAKVIILCGSGDNGGDGYALARRLVGR-FR-VLVFEMKLTKSPMCQLQKERAKKAGVVIK 103 (475)
T ss_dssp SCTTCEEEEEECSSHHHHHHHHHHHHHBTT-BE-EEEEESSCCCSHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCeEEEEECCCCCHHHHHHHHHHHHcC-Cc-eEEEEeCCCCCHHHHHHHHHHHHCCCcEe
Confidence 455678999999876 467778888866 65 5533 22 1345777776654
No 262
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=37.59 E-value=45 Score=24.59 Aligned_cols=65 Identities=14% Similarity=0.074 Sum_probs=38.3
Q ss_pred eCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
+.+-.+.+.+.+.+...-....+......+...|+.+.+|..+..+|...+..|++-+.++..+.
T Consensus 63 i~~K~E~~~ptGSfKdRga~~~l~~a~~~g~~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~ 127 (372)
T 1p5j_A 63 VYLKMDSAQPSGSFKIRGIGHFCKRWAKQGCAHFVCSSAGNAGMAAAYAARQLGVPATIVVPGTT 127 (372)
T ss_dssp EEEECGGGSGGGBTTHHHHHHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHHTCCEEEEECTTC
T ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHcCCcEEEEECCCC
Confidence 55555555555544432223333333234455667777788888888888889997444555443
No 263
>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=37.45 E-value=32 Score=25.66 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=29.6
Q ss_pred CcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621 80 DRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
..++++|++-..+...+..|...|+. +..+.|+.
T Consensus 301 ~~~lVF~~t~~~a~~l~~~L~~~~~~-~~~lhg~~ 334 (434)
T 2db3_A 301 DGTIVFVETKRGADFLASFLSEKEFP-TTSIHGDR 334 (434)
T ss_dssp TTEEEECSSHHHHHHHHHHHHHTTCC-EEEESTTS
T ss_pred CCEEEEEeCcHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence 34999999988999999999999996 88899884
No 264
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=37.36 E-value=97 Score=21.54 Aligned_cols=77 Identities=16% Similarity=0.116 Sum_probs=43.8
Q ss_pred CCCceeeeCHHHHHHHhhC-CCEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEe
Q 032621 8 SGAEVITVDVRAAKNLLES-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGC 86 (137)
Q Consensus 8 ~~~~~~~is~~~~~~~~~~-~~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c 86 (137)
++.....++.+++.+.++. ..+++|+=.----....+|++ .++...+. ..+.++++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~k~i~~D~DGTL~~~~~~~~~~------------------~~~l~~l~---~~g~~~~~~T 60 (306)
T 2oyc_A 2 SLARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGA------------------PELLERLA---RAGKAALFVS 60 (306)
T ss_dssp CCCCCEECCHHHHHHHHHHCSEEEECSBTTTEETTEECTTH------------------HHHHHHHH---HTTCEEEEEE
T ss_pred cchhhhcCCHHHHHHHHhhCCEEEECCCCcEecCCccCcCH------------------HHHHHHHH---HCCCeEEEEE
Confidence 3445678888888888775 367777643110000111211 23333443 4577777777
Q ss_pred CC-CchHHHHHHHHHHCCcc
Q 032621 87 QS-GARSLHATADLLGAGFK 105 (137)
Q Consensus 87 ~~-g~ra~~~~~~l~~~G~~ 105 (137)
+. |.........|..+|++
T Consensus 61 n~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 61 NNSRRARPELALRFARLGFG 80 (306)
T ss_dssp CCCSSCHHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHhcCCC
Confidence 54 44455666788888875
No 265
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=37.05 E-value=64 Score=19.01 Aligned_cols=13 Identities=0% Similarity=0.064 Sum_probs=5.3
Q ss_pred HHHHCCccceeecc
Q 032621 98 DLLGAGFKHVSNFG 111 (137)
Q Consensus 98 ~l~~~G~~~v~~l~ 111 (137)
.+....++ +.+++
T Consensus 45 ~l~~~~~d-lvi~d 57 (140)
T 3grc_A 45 QVARRPYA-AMTVD 57 (140)
T ss_dssp HHHHSCCS-EEEEC
T ss_pred HHHhCCCC-EEEEe
Confidence 33444443 44443
No 266
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=37.00 E-value=61 Score=18.82 Aligned_cols=13 Identities=8% Similarity=-0.041 Sum_probs=5.5
Q ss_pred HHHHCCccceeecc
Q 032621 98 DLLGAGFKHVSNFG 111 (137)
Q Consensus 98 ~l~~~G~~~v~~l~ 111 (137)
.+....++ +.+++
T Consensus 45 ~l~~~~~d-lii~d 57 (132)
T 3lte_A 45 KLSTFEPA-IMTLD 57 (132)
T ss_dssp HHHHTCCS-EEEEE
T ss_pred HHHhcCCC-EEEEe
Confidence 34444443 44443
No 267
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=36.82 E-value=56 Score=23.71 Aligned_cols=64 Identities=19% Similarity=0.203 Sum_probs=39.4
Q ss_pred eCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
+.+-.+.+.+.+.+.+......+......+...|+.+.+|..+..+|...+..|++-+.++..+
T Consensus 47 v~~K~E~~~ptgS~KdR~a~~~l~~a~~~g~~~vv~~SsGN~g~alA~~a~~~G~~~~iv~p~~ 110 (351)
T 3aey_A 47 LYAKYEGLNPTGSFKDRGMTLAVSKAVEGGAQAVACASTGNTAASAAAYAARAGILAIVVLPAG 110 (351)
T ss_dssp EEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCSEEEESCSSHHHHHHHHHHHHHTSEEEEEEETT
T ss_pred EEEEecCCCCcccHHHHHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 5666666666665543333223333333445566667788888888888888999744455544
No 268
>3fpn_A Geobacillus stearothermophilus UVRA interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=36.36 E-value=45 Score=20.60 Aligned_cols=44 Identities=14% Similarity=0.268 Sum_probs=29.3
Q ss_pred hHHHHHHHhhccCCCcEEEEeC-----CCchHHHHHHHHHHCCccceeeccc
Q 032621 66 PDFLKKVRSLCKEEDRLVVGCQ-----SGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 66 ~~~~~~~~~~~~~~~~iv~~c~-----~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
.+....+..+ +.++++++.++ .|. -......|++.||.++.+ +|
T Consensus 7 ~qivd~il~~-~egtri~iLAPvv~~rKg~-~~~ll~~l~~~Gf~Rvrv-DG 55 (119)
T 3fpn_A 7 EQMVDRLLSY-PERTKMQILAPIVSGKKGT-HAKTLEDIRKQGYVRVRI-DR 55 (119)
T ss_dssp HHHHHHHHTS-CTTCEEEEEEEEEEEECSC-CHHHHHHHHHTTCCEEEE-TT
T ss_pred HHHHHHHHhC-CCCCEEEEEEEEeeCCCCc-HHHHHHHHHhCCCeEEEE-CC
Confidence 3556666655 67888888776 233 345667888899987754 54
No 269
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=36.06 E-value=41 Score=23.94 Aligned_cols=28 Identities=18% Similarity=0.083 Sum_probs=22.1
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
|++...|.-...+|..|.+.|++ |.+++
T Consensus 7 ViIVGaGpaGl~~A~~La~~G~~-V~v~E 34 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKYGLK-TLMIE 34 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCc-EEEEe
Confidence 34446777888889999999996 88876
No 270
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=35.94 E-value=48 Score=24.36 Aligned_cols=64 Identities=16% Similarity=0.082 Sum_probs=38.5
Q ss_pred eCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
+.+-.+.+.+.+.+........+......+...|+.+.+|..+..+|...+..|++-+.++..+
T Consensus 63 v~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~ 126 (364)
T 4h27_A 63 VYLKMDSAQPSGSFKIRGIGHFCKRWAKQGCAHFVCSSSGNAGMAAAYAARQLGVPATIVVPGT 126 (364)
T ss_dssp EEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred EEEEeCCCCCCCCHHHHHHHHHHHHHHhcCCCEEEEeCCChHHHHHHHHHHHhCCceEEEECCC
Confidence 5556666666554432222222333334455566777778888888888888999744455554
No 271
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=35.88 E-value=67 Score=18.82 Aligned_cols=23 Identities=13% Similarity=0.044 Sum_probs=9.1
Q ss_pred EEEEeCCCchHHHHHHHHHHCCc
Q 032621 82 LVVGCQSGARSLHATADLLGAGF 104 (137)
Q Consensus 82 iv~~c~~g~ra~~~~~~l~~~G~ 104 (137)
|+++++...........|...||
T Consensus 10 ilivdd~~~~~~~l~~~L~~~g~ 32 (136)
T 3hdv_A 10 VLVVDDNAVNREALILYLKSRGI 32 (136)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTC
T ss_pred EEEECCCHHHHHHHHHHHHHcCc
Confidence 33333333333333444444444
No 272
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=35.87 E-value=93 Score=22.45 Aligned_cols=45 Identities=13% Similarity=0.216 Sum_probs=28.5
Q ss_pred HHHHHHhh-cc-CCCcEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 68 FLKKVRSL-CK-EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 68 ~~~~~~~~-~~-~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
|...+... ++ .++.+++. ..|.-+..++..|.+.|.++|++..--
T Consensus 135 f~~~L~~~~~~l~gk~~lVl-GAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 135 HIRAIKESGFDMRGKTMVLL-GAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp HHHHHHHTTCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred HHHHHHhcCCCcCCCEEEEE-CcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 44444432 22 34556555 456677788888999999878776443
No 273
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=35.55 E-value=79 Score=20.39 Aligned_cols=39 Identities=18% Similarity=0.187 Sum_probs=30.0
Q ss_pred hHHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCc
Q 032621 66 PDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGF 104 (137)
Q Consensus 66 ~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~ 104 (137)
..+.+.+...+.++..+++.+..-.........+.+.||
T Consensus 122 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 122 EEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY 160 (204)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC
Confidence 456667766678888888887765667777888999998
No 274
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=35.43 E-value=54 Score=19.88 Aligned_cols=28 Identities=18% Similarity=0.200 Sum_probs=16.7
Q ss_pred CCCcEEEEeCCC--chHHHHHHHHHHCCcc
Q 032621 78 EEDRLVVGCQSG--ARSLHATADLLGAGFK 105 (137)
Q Consensus 78 ~~~~iv~~c~~g--~ra~~~~~~l~~~G~~ 105 (137)
.+..++++|-+. ..+..++..|.+.|++
T Consensus 12 ~g~dv~iv~~Gs~~~~a~eA~~~L~~~Gi~ 41 (118)
T 3ju3_A 12 KEADITFVTWGSQKGPILDVIEDLKEEGIS 41 (118)
T ss_dssp SSCSEEEEEEGGGHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEEEECccHHHHHHHHHHHHHCCCc
Confidence 344555555433 2566677778777764
No 275
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=35.24 E-value=1e+02 Score=21.02 Aligned_cols=28 Identities=14% Similarity=0.019 Sum_probs=20.2
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCcccee
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~ 108 (137)
.+.+++.+|.....-+..+.+.|.+-|.
T Consensus 181 ~ipvIA~GGI~t~~d~~~~~~~GadgV~ 208 (229)
T 3q58_A 181 GCRVIAEGRYNTPALAANAIEHGAWAVT 208 (229)
T ss_dssp TCCEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred CCCEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 5667778898776767777778987443
No 276
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=34.92 E-value=41 Score=24.22 Aligned_cols=28 Identities=21% Similarity=0.157 Sum_probs=21.7
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
|+++..|.-...+|..|.+.|++ |.+++
T Consensus 4 V~IVGaGpaGl~~A~~L~~~G~~-v~v~E 31 (412)
T 4hb9_A 4 VGIIGAGIGGTCLAHGLRKHGIK-VTIYE 31 (412)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCE-EEEEC
T ss_pred EEEECcCHHHHHHHHHHHhCCCC-EEEEe
Confidence 44556788888889999999996 77764
No 277
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=34.73 E-value=39 Score=21.65 Aligned_cols=30 Identities=17% Similarity=-0.043 Sum_probs=22.6
Q ss_pred EEEeCCCchHHHHHHHHHHC-Cccceeecccc
Q 032621 83 VVGCQSGARSLHATADLLGA-GFKHVSNFGGG 113 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~-G~~~v~~l~GG 113 (137)
|++|..|.-...++..|.+. |++ |.+++--
T Consensus 42 v~IiG~G~~G~~~a~~L~~~~g~~-V~vid~~ 72 (183)
T 3c85_A 42 VLILGMGRIGTGAYDELRARYGKI-SLGIEIR 72 (183)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCSC-EEEEESC
T ss_pred EEEECCCHHHHHHHHHHHhccCCe-EEEEECC
Confidence 45556788888888999988 985 7777643
No 278
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A
Probab=34.47 E-value=58 Score=23.07 Aligned_cols=18 Identities=39% Similarity=0.575 Sum_probs=13.6
Q ss_pred CCCcEEEEeCCCc-hHHHH
Q 032621 78 EEDRLVVGCQSGA-RSLHA 95 (137)
Q Consensus 78 ~~~~iv~~c~~g~-ra~~~ 95 (137)
...+||++|..|. |+...
T Consensus 211 ~~~PivVHCsaGvGRTGtf 229 (286)
T 2ooq_A 211 EAGPIVVHCSAGAGRTGCF 229 (286)
T ss_dssp TSCCEEEECSSSSHHHHHH
T ss_pred CCCcEEEEeCCCCcHHHHH
Confidence 5679999999886 65443
No 279
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=34.45 E-value=36 Score=25.30 Aligned_cols=27 Identities=30% Similarity=0.426 Sum_probs=20.0
Q ss_pred CCcEEEEeCCCchHHHHHHHHHHCCcc
Q 032621 79 EDRLVVGCQSGARSLHATADLLGAGFK 105 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~~~~l~~~G~~ 105 (137)
.++|++...+|.-|..++..|++.|++
T Consensus 9 ~~kVlVa~SGGvDSsv~a~lL~~~G~~ 35 (376)
T 2hma_A 9 KTRVVVGMSGGVDSSVTALLLKEQGYD 35 (376)
T ss_dssp GSEEEEECCSSHHHHHHHHHHHHTTCE
T ss_pred CCeEEEEEeCHHHHHHHHHHHHHcCCc
Confidence 345677667777888888888888875
No 280
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=34.45 E-value=72 Score=18.74 Aligned_cols=31 Identities=13% Similarity=0.007 Sum_probs=15.3
Q ss_pred CcEEEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 80 DRLVVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
..|+++++...........|...||. |....
T Consensus 19 ~~ilivdd~~~~~~~l~~~L~~~g~~-v~~~~ 49 (137)
T 2pln_A 19 MRVLLIEKNSVLGGEIEKGLNVKGFM-ADVTE 49 (137)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHTTCE-EEEES
T ss_pred CeEEEEeCCHHHHHHHHHHHHHcCcE-EEEeC
Confidence 34555554444445555555555653 44333
No 281
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=34.38 E-value=48 Score=19.81 Aligned_cols=31 Identities=16% Similarity=0.053 Sum_probs=21.3
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
.|+++ ..|.-....+..|...|++ |..++-.
T Consensus 8 ~v~I~-G~G~iG~~~a~~l~~~g~~-v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVI-GLGRFGGSIVKELHRMGHE-VLAVDIN 38 (144)
T ss_dssp SEEEE-CCSHHHHHHHHHHHHTTCC-CEEEESC
T ss_pred cEEEE-CCCHHHHHHHHHHHHCCCE-EEEEeCC
Confidence 34444 4577778888888888875 7766543
No 282
>1z63_A Helicase of the SNF2/RAD54 hamily; protein-DNA complex, hydrolase/DNA complex complex; 3.00A {Sulfolobus solfataricus} SCOP: c.37.1.19 c.37.1.19 PDB: 1z6a_A
Probab=34.29 E-value=52 Score=24.77 Aligned_cols=38 Identities=13% Similarity=-0.032 Sum_probs=30.5
Q ss_pred ccCCCcEEEEeCCCchHHHHHHHHHHC-CccceeeccccH
Q 032621 76 CKEEDRLVVGCQSGARSLHATADLLGA-GFKHVSNFGGGH 114 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~ra~~~~~~l~~~-G~~~v~~l~GG~ 114 (137)
...+.+++++|+.-..+......|... |+. +..+.|+.
T Consensus 338 ~~~~~k~lvF~~~~~~~~~l~~~l~~~~~~~-~~~~~g~~ 376 (500)
T 1z63_A 338 LDEGDKIAIFTQFVDMGKIIRNIIEKELNTE-VPFLYGEL 376 (500)
T ss_dssp HTTTCCEEEECSCHHHHHHHHHHHHHHHTCC-CCEEETTS
T ss_pred HccCCcEEEEEehHHHHHHHHHHHHHhhCCC-eEEEECCC
Confidence 456788999999877788888888874 875 77888875
No 283
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=34.24 E-value=69 Score=18.49 Aligned_cols=13 Identities=8% Similarity=-0.097 Sum_probs=5.5
Q ss_pred HHHHCCccceeecc
Q 032621 98 DLLGAGFKHVSNFG 111 (137)
Q Consensus 98 ~l~~~G~~~v~~l~ 111 (137)
.+....+ ++.+++
T Consensus 46 ~~~~~~~-dlvl~D 58 (129)
T 1p6q_A 46 IMAQNPH-HLVISD 58 (129)
T ss_dssp HHHTSCC-SEEEEC
T ss_pred HHHcCCC-CEEEEe
Confidence 3343333 355544
No 284
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=34.18 E-value=54 Score=23.13 Aligned_cols=20 Identities=15% Similarity=0.238 Sum_probs=14.7
Q ss_pred cCCCcEEEEeCCCc-hHHHHH
Q 032621 77 KEEDRLVVGCQSGA-RSLHAT 96 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-ra~~~~ 96 (137)
....+||++|..|. |+....
T Consensus 202 ~~~~pivVHCsaGvGRTGtfi 222 (284)
T 1fpr_A 202 PHAGPIIVHSSAGIGRTGTII 222 (284)
T ss_dssp TTCCCEEEESSBSSHHHHHHH
T ss_pred CCCCcEEEEcCCCCcHHHHHH
Confidence 45689999999876 655443
No 285
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=34.05 E-value=42 Score=25.24 Aligned_cols=44 Identities=20% Similarity=0.103 Sum_probs=29.1
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeeccccHH---HHHhCCCceecC
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFGGGHM---AWVQNGLKVKAR 127 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~---~w~~~~~p~~~~ 127 (137)
|++|..|.-...++..|.+.|++ |.+++--.. .....+.++..+
T Consensus 7 viIiG~Gr~G~~va~~L~~~g~~-vvvId~d~~~v~~~~~~g~~vi~G 53 (413)
T 3l9w_A 7 VIIAGFGRFGQITGRLLLSSGVK-MVVLDHDPDHIETLRKFGMKVFYG 53 (413)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEECCHHHHHHHHHTTCCCEES
T ss_pred EEEECCCHHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHhCCCeEEEc
Confidence 56667788888888888888886 777764432 334455555443
No 286
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=33.89 E-value=75 Score=18.80 Aligned_cols=14 Identities=0% Similarity=-0.261 Sum_probs=6.3
Q ss_pred HHHHHCCccceeecc
Q 032621 97 ADLLGAGFKHVSNFG 111 (137)
Q Consensus 97 ~~l~~~G~~~v~~l~ 111 (137)
..+....++ +.+++
T Consensus 42 ~~~~~~~~d-lvl~D 55 (136)
T 3t6k_A 42 QQIYKNLPD-ALICD 55 (136)
T ss_dssp HHHHHSCCS-EEEEE
T ss_pred HHHHhCCCC-EEEEe
Confidence 344444443 55444
No 287
>3oiy_A Reverse gyrase helicase domain; topoisomerase, DNA supercoiling, archaea, isomeras; 2.35A {Thermotoga maritima} PDB: 3p4y_A 3p4x_A*
Probab=33.53 E-value=43 Score=24.47 Aligned_cols=34 Identities=15% Similarity=0.113 Sum_probs=28.5
Q ss_pred CCcEEEEeCCCchHHHHHHHHHHCCcccee-ecccc
Q 032621 79 EDRLVVGCQSGARSLHATADLLGAGFKHVS-NFGGG 113 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~-~l~GG 113 (137)
+..++++|++-..+...+..|...|+. +. .+.|.
T Consensus 252 ~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~h~~ 286 (414)
T 3oiy_A 252 RDGILIFAQTEEEGKELYEYLKRFKFN-VGETWSEF 286 (414)
T ss_dssp CSSEEEEESSHHHHHHHHHHHHHTTCC-EEESSSCH
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCc-eehhhcCc
Confidence 477999999988899999999999986 65 67664
No 288
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=33.46 E-value=37 Score=23.76 Aligned_cols=31 Identities=16% Similarity=0.119 Sum_probs=24.9
Q ss_pred CCcEEEEeC---CCchHHHHHHHHHHCCc--cceee
Q 032621 79 EDRLVVGCQ---SGARSLHATADLLGAGF--KHVSN 109 (137)
Q Consensus 79 ~~~iv~~c~---~g~ra~~~~~~l~~~G~--~~v~~ 109 (137)
++.+++++. +|.....+...|++.|. +++.+
T Consensus 156 ~r~VilvDdmlaTG~T~~~ai~~L~~~G~~p~~I~~ 191 (243)
T 1bd3_D 156 ERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIF 191 (243)
T ss_dssp GSEEEEECSEESSCHHHHHHHHHHHHHTCCGGGEEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCcceEEE
Confidence 466788776 78889999999999998 77653
No 289
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=32.95 E-value=74 Score=22.85 Aligned_cols=64 Identities=9% Similarity=0.125 Sum_probs=36.7
Q ss_pred eCccccccCCCCCCCChHHHHHHHhhccCCC----cEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSLCKEED----RLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~~~~~~----~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
+.+-.+.+.+.+.+...-....+......+. ..|+-+.+|..+..+|...+..|++-+.++..+
T Consensus 39 v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~l~~~~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~ 106 (325)
T 3dwg_A 39 LWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAARLKGYRLICVMPEN 106 (325)
T ss_dssp EEEEETTSSTTSBTTHHHHHHHHHHHHHTTCCCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEESS
T ss_pred EEEEECCCCCCCChHHHHHHHHHHHHHHcCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCC
Confidence 5566666666665543222222322222222 445566788888888888888999744344443
No 290
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=32.67 E-value=60 Score=23.00 Aligned_cols=33 Identities=9% Similarity=0.116 Sum_probs=23.6
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
..|+-+.+|..+..+|...+..|++-+.++..+
T Consensus 62 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~ 94 (303)
T 2v03_A 62 DVLIEATSGNTGIALAMIAALKGYRMKLLMPDN 94 (303)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTCEEEEEEETT
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCcEEEEECCC
Confidence 456666778888888888888999744445444
No 291
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=32.65 E-value=1.1e+02 Score=22.04 Aligned_cols=44 Identities=11% Similarity=0.244 Sum_probs=27.6
Q ss_pred HHHHHHhh-cc-CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 68 FLKKVRSL-CK-EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 68 ~~~~~~~~-~~-~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
|...+... ++ .++.+++.. .|.-+..++..|.+.|..+|+++.-
T Consensus 141 f~~~L~~~~~~l~gk~~lVlG-aGG~g~aia~~L~~~Ga~~V~i~nR 186 (315)
T 3tnl_A 141 YMRALKEAGHDIIGKKMTICG-AGGAATAICIQAALDGVKEISIFNR 186 (315)
T ss_dssp HHHHHHHTTCCCTTSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHHHHHcCCCccCCEEEEEC-CChHHHHHHHHHHHCCCCEEEEEEC
Confidence 44444432 22 345555554 4666777788899999977876643
No 292
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=32.54 E-value=93 Score=23.67 Aligned_cols=39 Identities=18% Similarity=0.201 Sum_probs=25.7
Q ss_pred HHHHHHHhh--ccCCCcEEEEeCCCchHHHHHHHHHH----CCcc
Q 032621 67 DFLKKVRSL--CKEEDRLVVGCQSGARSLHATADLLG----AGFK 105 (137)
Q Consensus 67 ~~~~~~~~~--~~~~~~iv~~c~~g~ra~~~~~~l~~----~G~~ 105 (137)
.+.+.+.+. +.++++|++.+.+|.-|..++..|.+ .|++
T Consensus 4 kv~~~i~~~~l~~~~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~~~ 48 (464)
T 3a2k_A 4 KVRAFIHRHQLLSEGAAVIVGVSGGPDSLALLHVFLSLRDEWKLQ 48 (464)
T ss_dssp HHHHHHHHTCSSSCSSBEEEECCSSHHHHHHHHHHHHHHHTTTCB
T ss_pred HHHHHHHHcCCCCCCCEEEEEEcCcHHHHHHHHHHHHHHHHcCCe
Confidence 344455443 56677788888778877777777665 5664
No 293
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Probab=32.54 E-value=65 Score=23.12 Aligned_cols=20 Identities=35% Similarity=0.512 Sum_probs=14.3
Q ss_pred cCCCcEEEEeCCCc-hHHHHH
Q 032621 77 KEEDRLVVGCQSGA-RSLHAT 96 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-ra~~~~ 96 (137)
....|||+.|..|. |+....
T Consensus 233 ~~~~PIvVHCsaGvGRTGtfi 253 (307)
T 3s3e_A 233 AEQRPIVVHCSAGVGRSGTFI 253 (307)
T ss_dssp SCCSCEEEECSSSSHHHHHHH
T ss_pred CCCCCEEEEcCCCchHHHHHH
Confidence 34678999999876 655443
No 294
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal transduction, glycoprotein, phosphorylation, signal; 2.25A {Mus musculus} SCOP: c.45.1.2
Probab=32.48 E-value=64 Score=23.05 Aligned_cols=19 Identities=26% Similarity=0.417 Sum_probs=13.9
Q ss_pred CCCcEEEEeCCCc-hHHHHH
Q 032621 78 EEDRLVVGCQSGA-RSLHAT 96 (137)
Q Consensus 78 ~~~~iv~~c~~g~-ra~~~~ 96 (137)
...+||++|..|. |+....
T Consensus 224 ~~~PivVHCsaGvGRTGtfi 243 (302)
T 1yfo_A 224 YAGAIVVHCSAGVGRTGTFV 243 (302)
T ss_dssp TSCCEEEECSSSSHHHHHHH
T ss_pred CCCCEEEECCCCCcHHHHHH
Confidence 4678999999886 654443
No 295
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=32.47 E-value=38 Score=22.36 Aligned_cols=27 Identities=7% Similarity=0.080 Sum_probs=21.0
Q ss_pred ccCCCcEEEEeCCCchHHHHHHHHHHC
Q 032621 76 CKEEDRLVVGCQSGARSLHATADLLGA 102 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~ra~~~~~~l~~~ 102 (137)
+..+++|+++|.++..+......|.++
T Consensus 143 IAGDDTIlVi~r~~~~a~~l~~~l~~l 169 (170)
T 3lap_A 143 IAGDDTILVVAREPTTGAQLAGMFENL 169 (170)
T ss_dssp EECSSEEEEEECTTCCHHHHHHHHHHH
T ss_pred EecCCEEEEEeCCHHHHHHHHHHHHhc
Confidence 456788999999888888888777653
No 296
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=32.39 E-value=1.3e+02 Score=21.26 Aligned_cols=35 Identities=14% Similarity=0.081 Sum_probs=24.6
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
.++.+++.. .|.-+..++..|.+.|..+|+++.--
T Consensus 126 ~~k~vlVlG-aGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 345565554 46667777888889999778876544
No 297
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=32.35 E-value=65 Score=18.59 Aligned_cols=17 Identities=12% Similarity=0.173 Sum_probs=8.1
Q ss_pred HHHHHHHHCCccceeecc
Q 032621 94 HATADLLGAGFKHVSNFG 111 (137)
Q Consensus 94 ~~~~~l~~~G~~~v~~l~ 111 (137)
.+...+....++ +.+++
T Consensus 38 ~a~~~l~~~~~d-lii~D 54 (127)
T 3i42_A 38 DALHAMSTRGYD-AVFID 54 (127)
T ss_dssp HHHHHHHHSCCS-EEEEE
T ss_pred HHHHHHHhcCCC-EEEEe
Confidence 334445555553 55544
No 298
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=32.16 E-value=71 Score=24.11 Aligned_cols=34 Identities=15% Similarity=0.191 Sum_probs=23.5
Q ss_pred HHhhccCCCcEEEEeCCCchHHHHHHHHHH-----CCcc
Q 032621 72 VRSLCKEEDRLVVGCQSGARSLHATADLLG-----AGFK 105 (137)
Q Consensus 72 ~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~-----~G~~ 105 (137)
+...+.++++|++.+.+|.-|..++..|.+ .|++
T Consensus 6 l~~~l~~~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~g~~ 44 (433)
T 1ni5_A 6 LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVA 44 (433)
T ss_dssp HHHHHTTCSEEEEECCSBHHHHHHHHHHHHHHTTSTTCE
T ss_pred HHHhcCCCCEEEEEEcchHHHHHHHHHHHHHHHhcCCCe
Confidence 333446677788888888888777777766 5664
No 299
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=32.13 E-value=68 Score=22.61 Aligned_cols=20 Identities=15% Similarity=0.223 Sum_probs=14.7
Q ss_pred ccCCCcEEEEeCCCc-hHHHH
Q 032621 76 CKEEDRLVVGCQSGA-RSLHA 95 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~-ra~~~ 95 (137)
.....+||++|..|. |+...
T Consensus 203 ~~~~~PivVHCsaGvGRTGtf 223 (288)
T 4grz_A 203 LPHAGPIIVHSSAGIGRTGTI 223 (288)
T ss_dssp STTCCCEEEECSSSSHHHHHH
T ss_pred cCCCCcEEEEeCCCCcHHHHH
Confidence 345789999999876 65444
No 300
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=32.00 E-value=51 Score=22.94 Aligned_cols=27 Identities=22% Similarity=0.090 Sum_probs=21.5
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCcccee
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~ 108 (137)
++++...+|.-|..++..|.+.||+ |.
T Consensus 6 Kvvvl~SGGkDSs~al~~l~~~G~e-V~ 32 (237)
T 3rjz_A 6 DVAVLYSGGKDSNYALYWAIKNRFS-VK 32 (237)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCE-EE
T ss_pred EEEEEecCcHHHHHHHHHHHHcCCe-EE
Confidence 4666667788899999999999986 54
No 301
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=31.98 E-value=71 Score=17.96 Aligned_cols=38 Identities=13% Similarity=0.057 Sum_probs=26.3
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCcc
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFK 105 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~ 105 (137)
...+.+.++ ..+..+.+..+..........+++..||+
T Consensus 26 ~~kkal~~l-~~G~~l~V~~dd~~a~~di~~~~~~~G~~ 63 (82)
T 3lvj_C 26 MVRKTVRNM-QPGETLLIIADDPATTRDIPGFCTFMEHE 63 (82)
T ss_dssp HHHHHHHTS-CTTCEEEEEECCTTHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhC-CCCCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 344455444 66777767666666667788889999996
No 302
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=31.83 E-value=44 Score=23.48 Aligned_cols=31 Identities=13% Similarity=0.122 Sum_probs=26.2
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
+++.|+++++ +|.....+...|++.|-..|.
T Consensus 155 ~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~ 188 (250)
T 3ozf_A 155 KGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVA 188 (250)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEE
T ss_pred CCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEE
Confidence 6788999887 799999999999999986554
No 303
>3sqn_A Conserved domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MGA family; 2.31A {Enterococcus faecalis}
Probab=31.83 E-value=53 Score=25.25 Aligned_cols=28 Identities=11% Similarity=-0.019 Sum_probs=20.1
Q ss_pred cCCCcEEEEeCCCc-hHHHHHHHHHH-CCc
Q 032621 77 KEEDRLVVGCQSGA-RSLHATADLLG-AGF 104 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-ra~~~~~~l~~-~G~ 104 (137)
.+.++++++|++|. .|......|++ .+.
T Consensus 396 ~~~~~~~vVC~~GigtS~lL~~~L~~~F~~ 425 (485)
T 3sqn_A 396 AQTMTAYFLFQGEPAWKAFLQQELAAYLGT 425 (485)
T ss_dssp CCSEEEEEECCSCHHHHHHHHHHHHHHHCT
T ss_pred cccceEEEECCCchhHHHHHHHHHHHhcCC
Confidence 34456899999998 56666777776 454
No 304
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=31.79 E-value=61 Score=25.02 Aligned_cols=29 Identities=14% Similarity=0.011 Sum_probs=20.8
Q ss_pred cCCCcEEEEeCCCc-------hHHHHHHHHHHCCcc
Q 032621 77 KEEDRLVVGCQSGA-------RSLHATADLLGAGFK 105 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-------ra~~~~~~l~~~G~~ 105 (137)
.+...|++||.++. .|..++..|.+.|+.
T Consensus 144 ~r~~~IvV~cGSs~~~p~yye~A~eLGr~LA~~G~~ 179 (462)
T 3gh1_A 144 GATPNLVVCWGGHSINEVEYQYTREVGHELGLRELN 179 (462)
T ss_dssp TCCSCEEEEECCSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence 45677999999752 256666778888886
No 305
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=31.77 E-value=1.3e+02 Score=21.40 Aligned_cols=45 Identities=18% Similarity=0.061 Sum_probs=28.7
Q ss_pred HHHHHHhh-cc-CCCcEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 68 FLKKVRSL-CK-EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 68 ~~~~~~~~-~~-~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
|...+... ++ .+++++++. .|.-+..++..|.+.|..+|+++.--
T Consensus 109 ~~~~L~~~~~~~~~k~vlvlG-aGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 109 FGKMLSKFRVEIKNNICVVLG-SGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp HHHHHHHTTCCCTTSEEEEEC-SSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred HHHHHHHcCCCccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 44444432 22 355666664 45667777888899999778776543
No 306
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2
Probab=31.70 E-value=64 Score=23.26 Aligned_cols=19 Identities=21% Similarity=0.431 Sum_probs=14.4
Q ss_pred cCCCcEEEEeCCCc-hHHHH
Q 032621 77 KEEDRLVVGCQSGA-RSLHA 95 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-ra~~~ 95 (137)
....+||++|..|. |+...
T Consensus 237 ~~~~PivVHCsaGvGRTGtf 256 (315)
T 1wch_A 237 HRSGPIITHCSAGIGRSGTL 256 (315)
T ss_dssp CCSSCEEEECSSSSHHHHHH
T ss_pred CCCCCEEEEcCCCCcHHHHH
Confidence 45789999999886 65544
No 307
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=31.55 E-value=50 Score=24.30 Aligned_cols=32 Identities=16% Similarity=0.296 Sum_probs=24.2
Q ss_pred CcEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 80 DRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
..|||+ .+|.-...+|..|.+.|+++|.+|+-
T Consensus 7 ~dVvII-GgG~aGlsaA~~La~~G~~~V~vlE~ 38 (438)
T 3dje_A 7 SSLLIV-GAGTWGTSTALHLARRGYTNVTVLDP 38 (438)
T ss_dssp SCEEEE-CCSHHHHHHHHHHHHTTCCCEEEEES
T ss_pred CCEEEE-CCCHHHHHHHHHHHHcCCCcEEEEeC
Confidence 345555 56888888899999999945888864
No 308
>2ojl_A Hypothetical protein; BPR68, NESG, Q7WAF1, structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium; 2.10A {Bordetella parapertussis}
Probab=31.43 E-value=36 Score=20.78 Aligned_cols=19 Identities=16% Similarity=0.011 Sum_probs=12.2
Q ss_pred CcEEEEeCCCchHHHHHHH
Q 032621 80 DRLVVGCQSGARSLHATAD 98 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~~~~~ 98 (137)
+-.|.||.......+++|.
T Consensus 10 ~V~I~YC~~C~w~lRa~~l 28 (108)
T 2ojl_A 10 RIAIQYCTQCQWLLRAAWM 28 (108)
T ss_dssp EEEEEEETTTTCHHHHHHH
T ss_pred EEEEEECCCCCChHHHHHH
Confidence 3468999987655444443
No 309
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens}
Probab=31.42 E-value=68 Score=23.19 Aligned_cols=20 Identities=30% Similarity=0.489 Sum_probs=14.6
Q ss_pred cCCCcEEEEeCCCc-hHHHHH
Q 032621 77 KEEDRLVVGCQSGA-RSLHAT 96 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-ra~~~~ 96 (137)
....+||++|..|. |+....
T Consensus 235 ~~~~PivVHCsaGvGRTGtfi 255 (320)
T 2i75_A 235 GKEEPVVVHCSAGIGRTGVLI 255 (320)
T ss_dssp TCCSCEEEECSSSSSHHHHHH
T ss_pred cCCCCEEEEcCCCCcHHHHHH
Confidence 34679999999876 665443
No 310
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=31.08 E-value=55 Score=21.72 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=25.2
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
.++.|+|...+|.-....+..|.+.|++ |..+.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~-V~~~~ 52 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHE-PVAMV 52 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCe-EEEEE
Confidence 4567777777788888888889889985 77654
No 311
>3dex_A SAV_2001; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Streptomyces avermitilis} SCOP: c.47.1.0
Probab=31.06 E-value=37 Score=20.70 Aligned_cols=18 Identities=11% Similarity=-0.117 Sum_probs=11.6
Q ss_pred EEEEeCCCchHHHHHHHH
Q 032621 82 LVVGCQSGARSLHATADL 99 (137)
Q Consensus 82 iv~~c~~g~ra~~~~~~l 99 (137)
.|.||..+....+++|..
T Consensus 16 ~I~YC~~C~w~lRa~~la 33 (107)
T 3dex_A 16 QIEYCTQCRWLPRAAWLA 33 (107)
T ss_dssp EEEEETTTTCHHHHHHHH
T ss_pred EEEECCCCCChHHHHHHH
Confidence 578999876554444443
No 312
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Probab=31.03 E-value=71 Score=22.05 Aligned_cols=19 Identities=26% Similarity=0.448 Sum_probs=14.2
Q ss_pred cCCCcEEEEeCCCc-hHHHH
Q 032621 77 KEEDRLVVGCQSGA-RSLHA 95 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-ra~~~ 95 (137)
....+||++|..|. |+...
T Consensus 174 ~~~~pivVHCsaGvGRTGtf 193 (253)
T 1p15_A 174 SGNHPITVHCSAGAGRTGTF 193 (253)
T ss_dssp TTSCCEEEESSSSSHHHHHH
T ss_pred cCCCCEEEEcCCCCchhHHH
Confidence 45679999999886 65544
No 313
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=30.87 E-value=64 Score=21.73 Aligned_cols=29 Identities=10% Similarity=0.111 Sum_probs=24.7
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCccce
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKHV 107 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v 107 (137)
++ .|+++++ +|.....++..|++.|-+.+
T Consensus 117 ~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v 148 (213)
T 1lh0_A 117 QG-RVMLVDDVITAGTAIRESMEIIQAHGATLA 148 (213)
T ss_dssp CS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEE
T ss_pred CC-CEEEEEecccchHHHHHHHHHHHHCCCeEE
Confidence 56 8999988 78889999999999998654
No 314
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=30.76 E-value=1.1e+02 Score=19.88 Aligned_cols=43 Identities=12% Similarity=0.116 Sum_probs=31.5
Q ss_pred hHHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCcccee
Q 032621 66 PDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 66 ~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~ 108 (137)
..+...+...+.++..+++.|........+...+.+.||..+.
T Consensus 136 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~ 178 (214)
T 1yzh_A 136 KTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNG 178 (214)
T ss_dssp HHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeee
Confidence 4688888777788888888886544566666778888987443
No 315
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=30.70 E-value=39 Score=24.64 Aligned_cols=23 Identities=26% Similarity=0.374 Sum_probs=20.0
Q ss_pred CchHHHHHHHHHHCCccceeeccc
Q 032621 89 GARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 89 g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
|.+....|..+...|++ |.++.|
T Consensus 65 GkmG~aiAe~~~~~Ga~-V~lv~g 87 (313)
T 1p9o_A 65 GRRGATSAEAFLAAGYG-VLFLYR 87 (313)
T ss_dssp CHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred cHHHHHHHHHHHHCCCE-EEEEec
Confidence 66888999999999996 888877
No 316
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=30.47 E-value=81 Score=23.14 Aligned_cols=63 Identities=10% Similarity=-0.015 Sum_probs=34.8
Q ss_pred eCccccccCCCCCCCChHHHHHHHhhccCCCcEEEE-eCCCchHHHHHHHHHHCCccceeeccc
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVG-CQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~-c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
+.+-.+.+.+.+.+...-....+......+..-++. +.+|..+..+|...+..|++-+.++..
T Consensus 68 i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~vv~~~ssGN~g~a~A~aa~~~G~~~~iv~p~ 131 (388)
T 1v8z_A 68 IYLKREDLVHGGAHKTNNAIGQALLAKFMGKTRLIAETGAGQHGVATAMAGALLGMKVDIYMGA 131 (388)
T ss_dssp EEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEH
T ss_pred EEEEeccCCCCCCHHHHHHHHHHHHHHHcCCCEEEEecCchHHHHHHHHHHHHcCCcEEEEEcC
Confidence 556666666665442211111222111233334444 678998888888889999973334443
No 317
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=30.47 E-value=79 Score=18.03 Aligned_cols=45 Identities=13% Similarity=0.298 Sum_probs=30.2
Q ss_pred HHHHHHHhh--ccCCCcEEEEeCCCchH---HHHHHHHHHCCccceeecc
Q 032621 67 DFLKKVRSL--CKEEDRLVVGCQSGARS---LHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 67 ~~~~~~~~~--~~~~~~iv~~c~~g~ra---~~~~~~l~~~G~~~v~~l~ 111 (137)
++...+... -.++.+|+|.++....- ..+-..|+..|+.+|.+..
T Consensus 43 ~L~~~l~~~~~~~~~~~V~I~aD~~~~y~~vv~vmd~l~~aG~~~v~l~t 92 (99)
T 2pfu_A 43 TMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVG 92 (99)
T ss_dssp SHHHHHHHHSSSCCSSCEEEEECTTCCHHHHHHHHHHHHHTCCCCEECTT
T ss_pred HHHHHHHHHHhcCCCceEEEEcCCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 556666555 24566799998876544 4445567889999887654
No 318
>3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase, translation termination, binding, hydrolase, membrane, mRNA transport; 2.80A {Schizosaccharomyces pombe}
Probab=30.44 E-value=24 Score=27.08 Aligned_cols=37 Identities=11% Similarity=0.198 Sum_probs=28.0
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
...+++++|++-..+...+..|...|+. +..+.|++.
T Consensus 356 ~~~~~LVF~~s~~~a~~l~~~L~~~~~~-v~~~hg~~~ 392 (508)
T 3fho_A 356 TIGQSIIFCKKKDTAEEIARRMTADGHT-VACLTGNLE 392 (508)
T ss_dssp -CCCEEEBCSSTTTTTHHHHHHTTTTCC-CCEEC----
T ss_pred CCCcEEEEECCHHHHHHHHHHHHhCCCc-EEEEeCCCC
Confidence 4567999999988899999999999985 888888764
No 319
>3fmp_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 3.19A {Homo sapiens}
Probab=30.36 E-value=11 Score=28.52 Aligned_cols=37 Identities=19% Similarity=0.303 Sum_probs=0.0
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
...+++++|++-..+..++..|...|+. +..+.|++.
T Consensus 332 ~~~~~lvF~~s~~~~~~l~~~L~~~~~~-v~~lh~~~~ 368 (479)
T 3fmp_B 332 TIAQAMIFCHTRKTASWLAAELSKEGHQ-VALLSGEMM 368 (479)
T ss_dssp --------------------------------------
T ss_pred cCCceEEEeCcHHHHHHHHHHHHhCCcc-EEEecCCCC
Confidence 3457899999988899999999999985 888888764
No 320
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein tyrosine phosphatase precursor, phosph structural genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Probab=30.35 E-value=71 Score=22.80 Aligned_cols=19 Identities=26% Similarity=0.427 Sum_probs=14.0
Q ss_pred CCCcEEEEeCCCc-hHHHHH
Q 032621 78 EEDRLVVGCQSGA-RSLHAT 96 (137)
Q Consensus 78 ~~~~iv~~c~~g~-ra~~~~ 96 (137)
...+||++|..|. |+....
T Consensus 223 ~~~PivVHCsaGvGRTGtfi 242 (301)
T 2i1y_A 223 RSCPIIVHCSDGAGRTGTYI 242 (301)
T ss_dssp SSCCEEEECSSSSHHHHHHH
T ss_pred CCCCEEEEECCCCchhHHHH
Confidence 4578999999886 665543
No 321
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=30.32 E-value=96 Score=19.54 Aligned_cols=42 Identities=12% Similarity=0.074 Sum_probs=30.2
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceee
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSN 109 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~ 109 (137)
.+...+...+ ++..+++++............|.+.||+.+.+
T Consensus 105 ~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~ 146 (170)
T 3q87_B 105 EVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRIL 146 (170)
T ss_dssp HHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEE
Confidence 4555555555 77778888876677888888999999975443
No 322
>2v6i_A RNA helicase; membrane, hydrolase, transmembrane, RNA replication, viral replication, nucleotide-binding; 2.10A {Kokobera virus} PDB: 2v6j_A
Probab=30.29 E-value=55 Score=24.47 Aligned_cols=35 Identities=23% Similarity=0.069 Sum_probs=29.6
Q ss_pred CCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621 79 EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
...++++|++-..+...+..|...|+. +..+.|+.
T Consensus 171 ~~~~lVF~~~~~~~~~l~~~L~~~~~~-v~~lhg~~ 205 (431)
T 2v6i_A 171 DGRTVWFVHSIKQGAEIGTCLQKAGKK-VLYLNRKT 205 (431)
T ss_dssp SSCEEEECSSHHHHHHHHHHHHHTTCC-EEEESTTT
T ss_pred CCCEEEEeCCHHHHHHHHHHHHHcCCe-EEEeCCcc
Confidence 456899999988899999999999985 88888863
No 323
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A*
Probab=30.27 E-value=80 Score=22.72 Aligned_cols=20 Identities=25% Similarity=0.416 Sum_probs=14.8
Q ss_pred cCCCcEEEEeCCCc-hHHHHH
Q 032621 77 KEEDRLVVGCQSGA-RSLHAT 96 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-ra~~~~ 96 (137)
....+||+.|..|. |+..+.
T Consensus 237 ~~~~PivVHCsaGvGRTGtfi 257 (316)
T 3b7o_A 237 MDAGPVVVHCSAGIGRTGTFI 257 (316)
T ss_dssp TTCCCEEEEESSSSHHHHHHH
T ss_pred CCCCCEEEEcCCCCcHHHHHH
Confidence 46789999999886 655443
No 324
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=30.24 E-value=83 Score=18.96 Aligned_cols=35 Identities=23% Similarity=0.170 Sum_probs=16.3
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCccceeeccccHHH
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMA 116 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~ 116 (137)
.|+++++...........|...||+ |.....+-.+
T Consensus 5 ~ILivdd~~~~~~~l~~~L~~~g~~-v~~~~~~~~a 39 (155)
T 1qkk_A 5 SVFLIDDDRDLRKAMQQTLELAGFT-VSSFASATEA 39 (155)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCE-EEEESCHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCcE-EEEECCHHHH
Confidence 3444444444444455555555553 4444433333
No 325
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=30.18 E-value=38 Score=24.28 Aligned_cols=32 Identities=9% Similarity=-0.065 Sum_probs=26.7
Q ss_pred cCCCcEEEEeC---CCchHHHHHHHHHHCCcccee
Q 032621 77 KEEDRLVVGCQ---SGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 77 ~~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~ 108 (137)
.+++.|+++++ +|.....++..|++.|.+.|.
T Consensus 194 ~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~ 228 (291)
T 1o57_A 194 KTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAG 228 (291)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEE
T ss_pred CCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEE
Confidence 47788999988 788899999999999987543
No 326
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=30.12 E-value=46 Score=22.15 Aligned_cols=25 Identities=20% Similarity=0.169 Sum_probs=13.8
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCcc
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFK 105 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~ 105 (137)
++++.+.+|.-|..++..|.+.|++
T Consensus 8 kv~v~~SGG~DS~~ll~ll~~~g~~ 32 (203)
T 3k32_A 8 DVHVLFSGGKDSSLSAVILKKLGYN 32 (203)
T ss_dssp EEEEECCCSHHHHHHHHHHHHTTEE
T ss_pred eEEEEEECcHHHHHHHHHHHHcCCC
Confidence 3555555555565555555555553
No 327
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=30.07 E-value=85 Score=18.27 Aligned_cols=13 Identities=0% Similarity=-0.230 Sum_probs=5.8
Q ss_pred HHHHCCccceeecc
Q 032621 98 DLLGAGFKHVSNFG 111 (137)
Q Consensus 98 ~l~~~G~~~v~~l~ 111 (137)
.+....++ +.+++
T Consensus 42 ~~~~~~~d-lvl~D 54 (136)
T 1mvo_A 42 KAETEKPD-LIVLD 54 (136)
T ss_dssp HHHHHCCS-EEEEE
T ss_pred HHhhcCCC-EEEEe
Confidence 34444443 55443
No 328
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=29.76 E-value=1.2e+02 Score=21.37 Aligned_cols=35 Identities=9% Similarity=0.046 Sum_probs=24.4
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
.++.+++. ..|.-+..++..|.+.|+.+|+++.--
T Consensus 125 ~~k~vlvl-GaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 125 KGATILLI-GAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TTCEEEEE-CCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred cCCEEEEE-CchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 34556555 446667777888899998778876543
No 329
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=29.76 E-value=70 Score=23.34 Aligned_cols=30 Identities=30% Similarity=0.284 Sum_probs=19.3
Q ss_pred ccCCCcEEEEeCCCc-------hHHHHHHHHHHCCcc
Q 032621 76 CKEEDRLVVGCQSGA-------RSLHATADLLGAGFK 105 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~-------ra~~~~~~l~~~G~~ 105 (137)
+.++++|-+++.++. +-..+...|++.||+
T Consensus 10 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~ 46 (336)
T 3sr3_A 10 LKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFH 46 (336)
T ss_dssp CCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCE
T ss_pred CCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCE
Confidence 456777877777652 234555677778875
No 330
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=29.68 E-value=54 Score=23.98 Aligned_cols=29 Identities=21% Similarity=0.269 Sum_probs=21.4
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
|++...|.-...+|..|.+.|+++|.+++
T Consensus 7 VvIVGaG~aGl~~A~~L~~~G~~~v~v~E 35 (410)
T 3c96_A 7 ILIAGAGIGGLSCALALHQAGIGKVTLLE 35 (410)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred EEEECCCHHHHHHHHHHHhCCCCeEEEEE
Confidence 34446677888888889999986577765
No 331
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=29.68 E-value=73 Score=22.49 Aligned_cols=64 Identities=11% Similarity=0.131 Sum_probs=35.6
Q ss_pred eCccccccCCCCCCCChHHHHHHHhhcc-----CCCc-EEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSLCK-----EEDR-LVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
+.+-.+.+.+.+.+...-....+..... +++. .|+.+.+|..+..+|...+..|++-+.++..+
T Consensus 26 v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~g~~~~vv~assGN~g~a~A~~a~~~G~~~~i~~p~~ 95 (304)
T 1ve1_A 26 VWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQ 95 (304)
T ss_dssp EEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTSCCEEEESCCSHHHHHHHHHHHHHTCEEEEEEETT
T ss_pred EEEEecccCCCCcHHHHHHHHHHHHHHHcCCCCCCCccEEEEeCCcHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 5555666666554433222222222212 2232 45556678888888888889999744455544
No 332
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=29.64 E-value=61 Score=22.42 Aligned_cols=29 Identities=10% Similarity=0.037 Sum_probs=25.0
Q ss_pred CCCcEEEEeC---CCchHHHHHHHHHHCCccc
Q 032621 78 EEDRLVVGCQ---SGARSLHATADLLGAGFKH 106 (137)
Q Consensus 78 ~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~ 106 (137)
++++|+|+++ +|.....+...|++.|.+-
T Consensus 135 ~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~v 166 (232)
T 3mjd_A 135 TNKKVLLIDDVMTAGTAFYESYNKLKIINAKI 166 (232)
T ss_dssp TTCEEEEECSCCSSSHHHHHHHHHHHTTTCEE
T ss_pred CCCEEEEEEeeccccHHHHHHHHHHHHCCCEE
Confidence 6888999988 7888899999999999763
No 333
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=29.58 E-value=89 Score=18.35 Aligned_cols=29 Identities=7% Similarity=0.149 Sum_probs=13.6
Q ss_pred EEEEeCCCchHHHHHHHHHH--CCccceeecc
Q 032621 82 LVVGCQSGARSLHATADLLG--AGFKHVSNFG 111 (137)
Q Consensus 82 iv~~c~~g~ra~~~~~~l~~--~G~~~v~~l~ 111 (137)
.+..|.+|..+......+.. ..+ ++.+++
T Consensus 29 ~v~~~~~~~~al~~~~~~~~~~~~~-dlvllD 59 (133)
T 2r25_B 29 NIELACDGQEAFDKVKELTSKGENY-NMIFMD 59 (133)
T ss_dssp CEEEESSHHHHHHHHHHHHHHTCCC-SEEEEC
T ss_pred eEEEECCHHHHHHHHHHHHhcCCCC-CEEEEe
Confidence 45556665555444333222 233 466554
No 334
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=29.53 E-value=1e+02 Score=22.44 Aligned_cols=14 Identities=7% Similarity=-0.047 Sum_probs=8.1
Q ss_pred HHHHHHHHHHCCcc
Q 032621 92 SLHATADLLGAGFK 105 (137)
Q Consensus 92 a~~~~~~l~~~G~~ 105 (137)
....++.|.+.|++
T Consensus 161 G~~la~~L~~~gI~ 174 (315)
T 3ecs_A 161 GKKMAKALCHLNVP 174 (315)
T ss_dssp HHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHcCCC
Confidence 34446666666665
No 335
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=29.15 E-value=90 Score=18.83 Aligned_cols=38 Identities=16% Similarity=0.085 Sum_probs=25.7
Q ss_pred HHHHHHHhhccCCCcEEEEeCC------CchHHHHHHHHHHCCcc
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQS------GARSLHATADLLGAGFK 105 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~------g~ra~~~~~~l~~~G~~ 105 (137)
+..+.+...+ ...+|++|..+ +..+..+-..|.+.|++
T Consensus 4 ~~~~~v~~~i-~~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~ 47 (121)
T 3gx8_A 4 EIRKAIEDAI-ESAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVD 47 (121)
T ss_dssp HHHHHHHHHH-HSCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBC
T ss_pred HHHHHHHHHh-ccCCEEEEEeccCCCCCCccHHHHHHHHHHcCCC
Confidence 3444555543 44567787763 66888888899988875
No 336
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Probab=28.99 E-value=71 Score=22.78 Aligned_cols=19 Identities=21% Similarity=0.408 Sum_probs=14.0
Q ss_pred cCCCcEEEEeCCCc-hHHHH
Q 032621 77 KEEDRLVVGCQSGA-RSLHA 95 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-ra~~~ 95 (137)
....+||++|..|. |+...
T Consensus 220 ~~~~PivVHCsaGvGRTGtf 239 (306)
T 3m4u_A 220 VTTSPILVHCSAGIGRTGTL 239 (306)
T ss_dssp CCSSCEEEECSSSSHHHHHH
T ss_pred CCCCCEEEEcCCCCcchhee
Confidence 34679999999876 65444
No 337
>3qek_A NMDA glutamate receptor subunit; amino terminal domain, ION channel, NMDA receptor, allosteri modulation, phenylethanolamine, polyamine; HET: NAG BMA; 2.00A {Xenopus laevis} PDB: 3qel_A* 3qem_A* 3q41_A*
Probab=28.72 E-value=77 Score=22.76 Aligned_cols=47 Identities=11% Similarity=-0.007 Sum_probs=29.4
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCcc---ceeecccc
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFK---HVSNFGGG 113 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~---~v~~l~GG 113 (137)
++...+.++...+..+|++|..+..+..+...++++|.. .+++...+
T Consensus 203 d~~~~l~~i~~~~~~vii~~~~~~~~~~~~~~a~~~g~~~~~~~~i~~~~ 252 (384)
T 3qek_A 203 NLTALLLEAKELEARVIILSASEDDATAVYKSAAMLDMTGAGYVWLVGER 252 (384)
T ss_dssp CCHHHHHHHHTSSCCEEEEECCHHHHHHHHHHHHHTTCSSTTCEEECCSG
T ss_pred hHHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHcCCccCCeEEEEecc
Confidence 444444444334556666666677788888888889986 34444443
No 338
>2z83_A Helicase/nucleoside triphosphatase; hydrolase, membrane, nucleotide-binding, RNA replication, transmembrane, viral protein; 1.80A {Japanese encephalitis virus} PDB: 2v8o_A 2qeq_A
Probab=28.70 E-value=62 Score=24.43 Aligned_cols=33 Identities=21% Similarity=0.017 Sum_probs=28.4
Q ss_pred CCcEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 79 EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
...++++|++-..+...+..|...|+. +..+.|
T Consensus 190 ~~~~LVF~~s~~~~~~l~~~L~~~g~~-v~~lh~ 222 (459)
T 2z83_A 190 AGKTVWFVASVKMGNEIAMCLQRAGKK-VIQLNR 222 (459)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHTTCC-EEEEST
T ss_pred CCCEEEEeCChHHHHHHHHHHHhcCCc-EEecCH
Confidence 567999999988899999999999986 777776
No 339
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=28.63 E-value=76 Score=21.08 Aligned_cols=47 Identities=11% Similarity=0.001 Sum_probs=29.0
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHHhCCCcee
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWVQNGLKVK 125 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~p~~ 125 (137)
..+++++|..+ .-+..++..|.+.||+-+-+++.....+.-.+.|+-
T Consensus 11 ~~k~v~IiGAG-g~g~~v~~~l~~~~~~~vgfiDd~~~~~~~~g~~Vl 57 (220)
T 4ea9_A 11 AIGGVVIIGGG-GHAKVVIESLRACGETVAAIVDADPTRRAVLGVPVV 57 (220)
T ss_dssp CSSCEEEECCS-HHHHHHHHHHHHTTCCEEEEECSCC---CBTTBCEE
T ss_pred CCCCEEEEcCC-HHHHHHHHHHHhCCCEEEEEEeCCcccCcCCCeeEE
Confidence 34578888664 456666777777899866677765444333455554
No 340
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=28.57 E-value=80 Score=18.61 Aligned_cols=14 Identities=7% Similarity=-0.111 Sum_probs=6.2
Q ss_pred HHHHHCCccceeecc
Q 032621 97 ADLLGAGFKHVSNFG 111 (137)
Q Consensus 97 ~~l~~~G~~~v~~l~ 111 (137)
..+....++ +.+++
T Consensus 42 ~~l~~~~~d-lvi~d 55 (142)
T 2qxy_A 42 TFLRREKID-LVFVD 55 (142)
T ss_dssp HHHTTSCCS-EEEEE
T ss_pred HHHhccCCC-EEEEe
Confidence 334444443 55544
No 341
>2g3w_A YAEQ protein, hypothetical protein XAC2396; xanthomonas axonopodis PV citri, unknown funct; HET: MSE; 1.90A {Xanthomonas axonopodis PV} SCOP: c.52.1.33
Probab=28.53 E-value=81 Score=21.12 Aligned_cols=36 Identities=8% Similarity=0.100 Sum_probs=20.3
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHH-H--CCcccee--ecccc
Q 032621 77 KEEDRLVVGCQSGARSLHATADLL-G--AGFKHVS--NFGGG 113 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~-~--~G~~~v~--~l~GG 113 (137)
.+.+.+++||.++ ++...||.-. . ..++|+. .++-.
T Consensus 97 ~ra~~V~vy~yg~-~~~~vWw~~~~~kl~r~~nl~V~~l~~~ 137 (182)
T 2g3w_A 97 NRSREAVVIGYGG-QATETWWKKHANAMGRYRNLRVIELDSQ 137 (182)
T ss_dssp HHSSEEEEEECCT-HHHHHHHHHHHHHHTTCSSEEEEECCHH
T ss_pred ccCCeEEEEecCC-chHHHHHHHhHHHHhCcCCcEEEEcCHH
Confidence 4567899999865 4444444322 2 4556654 44443
No 342
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=28.43 E-value=87 Score=20.61 Aligned_cols=26 Identities=12% Similarity=0.073 Sum_probs=16.1
Q ss_pred CcEEEEeCCCchHHHHHHHHHHCCcc
Q 032621 80 DRLVVGCQSGARSLHATADLLGAGFK 105 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~~~~~l~~~G~~ 105 (137)
++|++++.+...-.....+|+++|++
T Consensus 3 ~~I~iiD~g~~n~~si~~al~~~G~~ 28 (211)
T 4gud_A 3 QNVVIIDTGCANISSVKFAIERLGYA 28 (211)
T ss_dssp CCEEEECCCCTTHHHHHHHHHHTTCC
T ss_pred CEEEEEECCCChHHHHHHHHHHCCCE
Confidence 35777766544444566667777764
No 343
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=28.12 E-value=90 Score=23.78 Aligned_cols=53 Identities=13% Similarity=0.072 Sum_probs=35.9
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHH--CCccceeeccccHHHHHhC
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLG--AGFKHVSNFGGGHMAWVQN 120 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~--~G~~~v~~l~GG~~~w~~~ 120 (137)
++.+.+.+.+ +.-.-|++|++|..|-..|-.+.. -|-++|..+.|+|.+|...
T Consensus 131 ~lae~l~~~~-p~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~ 185 (454)
T 4ao9_A 131 RLARLICERF-PQIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLG 185 (454)
T ss_dssp HHHHHHHHHS-TTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCB
T ss_pred HHHHHHHHhC-CCCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCcccc
Confidence 4444554443 345568889999988777766654 3667788889988876543
No 344
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=28.08 E-value=67 Score=23.01 Aligned_cols=29 Identities=17% Similarity=0.068 Sum_probs=22.2
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
|++...|.-...+|..|.+.|++ |.+++-
T Consensus 7 VvIvG~G~aGl~~A~~La~~G~~-V~l~E~ 35 (397)
T 3cgv_A 7 VLVVGGGPGGSTAARYAAKYGLK-TLMIEK 35 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred EEEECcCHHHHHHHHHHHHCCCC-EEEEeC
Confidence 34446788888888999999985 887764
No 345
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine phosphatase, glepp1, PTPU2, structural genom structural genomics consortium, SGC; 2.15A {Homo sapiens} PDB: 2g59_A 2pi7_A
Probab=28.01 E-value=63 Score=23.00 Aligned_cols=19 Identities=21% Similarity=0.529 Sum_probs=14.3
Q ss_pred cCCCcEEEEeCCCc-hHHHH
Q 032621 77 KEEDRLVVGCQSGA-RSLHA 95 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-ra~~~ 95 (137)
....+||++|..|. |+...
T Consensus 214 ~~~~PivVHCsaGvGRTGtf 233 (295)
T 2gjt_A 214 KSKGPMIIHCSAGVGRTGTF 233 (295)
T ss_dssp HCCSCEEEESSSSSHHHHHH
T ss_pred cCCCcEEEEECCCCccchHH
Confidence 35689999999886 66554
No 346
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine phosphatase, lymphoid phosphatase, PEP, LYP, struct genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A 2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Probab=27.99 E-value=85 Score=22.54 Aligned_cols=20 Identities=15% Similarity=0.376 Sum_probs=14.4
Q ss_pred cCCCcEEEEeCCCc-hHHHHH
Q 032621 77 KEEDRLVVGCQSGA-RSLHAT 96 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-ra~~~~ 96 (137)
....|||+.|..|. |+....
T Consensus 218 ~~~~PivVHCsaGvGRTGtfi 238 (309)
T 2p6x_A 218 DDSVPICIHCSAGCGRTGVIC 238 (309)
T ss_dssp SCSSCEEEECSSSSSHHHHHH
T ss_pred cCCCcEEEEeCCCCcHHHHHH
Confidence 35679999999876 654443
No 347
>1fuu_A Yeast initiation factor 4A; IF4A, helicase, DEAD-box protein, translation; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 2vso_A* 2vsx_A*
Probab=27.67 E-value=13 Score=26.88 Aligned_cols=37 Identities=19% Similarity=0.183 Sum_probs=0.0
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
...+++++|++-..+...+..|...|+. +..+.|++.
T Consensus 258 ~~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 294 (394)
T 1fuu_A 258 SVTQAVIFCNTRRKVEELTTKLRNDKFT-VSAIYSDLP 294 (394)
T ss_dssp --------------------------------------
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCCe-EEEeeCCCC
Confidence 3457899999888888999999998885 778888754
No 348
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=27.59 E-value=1.1e+02 Score=18.82 Aligned_cols=44 Identities=11% Similarity=0.155 Sum_probs=25.0
Q ss_pred HHHHHHHhh---ccCCCcEEEEeCC--CchHHHHHHHHHHCCccceeeccc
Q 032621 67 DFLKKVRSL---CKEEDRLVVGCQS--GARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 67 ~~~~~~~~~---~~~~~~iv~~c~~--g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
++.+++.+. ++.++.+++.|+= |.-...+...+.. ..++.++.|
T Consensus 43 ~~~~~i~~~i~~~~~~~gvliLtDl~GGSp~n~a~~~~~~--~~~v~vi~G 91 (135)
T 1pdo_A 43 TLIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVD--KEHYEVIAG 91 (135)
T ss_dssp HHHHHHHHHHTTSCCTTCEEEEESSTTSHHHHHHHHHHTT--CTTEEEEES
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHHHhc--cCCEEEEeC
Confidence 555655555 4455678888884 4434444343333 346887776
No 349
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=27.59 E-value=1e+02 Score=21.80 Aligned_cols=64 Identities=17% Similarity=0.080 Sum_probs=34.9
Q ss_pred eCccccccCCCCCCCChHHHHHHHhhccCCC--cEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSLCKEED--RLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~~~~~~--~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
+.+-.+.+.|.+.+...-....+......+. +-|+-+.+|..+..+|...+..|++-+.++..+
T Consensus 33 v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~~vv~aSsGN~g~a~A~aa~~~G~~~~iv~p~~ 98 (303)
T 1o58_A 33 IFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNGIVEPTSGNMGIAIAMIGAKRGHRVILTMPET 98 (303)
T ss_dssp EEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCTTCEEEECSSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred EEEEecCCCCCCChHHHHHHHHHHHHHHcCCCCCCEEEECchHHHHHHHHHHHHcCCcEEEEECCC
Confidence 4555555555554433222222322222222 335566678888888888889999744445443
No 350
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=27.56 E-value=57 Score=24.47 Aligned_cols=27 Identities=19% Similarity=0.129 Sum_probs=21.5
Q ss_pred CCcEEEEeCCCchHHHHHHHHHHCCcc
Q 032621 79 EDRLVVGCQSGARSLHATADLLGAGFK 105 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~~~~l~~~G~~ 105 (137)
+.++++.+.+|.-|..+++.|.+.|++
T Consensus 187 ~~kvlvalSGGvDS~vll~ll~~~G~~ 213 (413)
T 2c5s_A 187 GGKVMVLLSGGIDSPVAAYLTMKRGVS 213 (413)
T ss_dssp TEEEEEECCSSSHHHHHHHHHHHBTEE
T ss_pred CCeEEEEeCCCChHHHHHHHHHHcCCc
Confidence 456777777888888888888888875
No 351
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=27.51 E-value=72 Score=22.25 Aligned_cols=29 Identities=28% Similarity=0.389 Sum_probs=22.5
Q ss_pred EEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 82 LVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 82 iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
|+|+ ..|.-...+|..|.+.|++ |.+++-
T Consensus 5 V~II-GaG~~Gl~~A~~L~~~G~~-V~vlE~ 33 (336)
T 1yvv_A 5 IAII-GTGIAGLSAAQALTAAGHQ-VHLFDK 33 (336)
T ss_dssp EEEE-CCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred EEEE-CCcHHHHHHHHHHHHCCCc-EEEEEC
Confidence 4444 6788888899999999985 888764
No 352
>2ivy_A Hypothetical protein SSO1404; structural genomics, unknown function, CAS, RNAI, crispr; 1.4A {Sulfolobus solfataricus} SCOP: d.58.58.1 PDB: 2i8e_A
Probab=27.43 E-value=66 Score=19.10 Aligned_cols=16 Identities=13% Similarity=0.015 Sum_probs=8.9
Q ss_pred chHHHHHHHHHHCCcc
Q 032621 90 ARSLHATADLLGAGFK 105 (137)
Q Consensus 90 ~ra~~~~~~l~~~G~~ 105 (137)
.|...++..|...|+.
T Consensus 15 kr~~kv~k~L~~yGl~ 30 (101)
T 2ivy_A 15 NLRNRVAEFLKKKGLD 30 (101)
T ss_dssp HHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHhCCh
Confidence 3555555666666643
No 353
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=27.31 E-value=44 Score=22.53 Aligned_cols=46 Identities=9% Similarity=0.027 Sum_probs=35.7
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCC--ccceeeccc
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAG--FKHVSNFGG 112 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G--~~~v~~l~G 112 (137)
.+...+...+.++..+++++............|.+.| |..+..+.-
T Consensus 175 ~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~~e~ 222 (255)
T 3mb5_A 175 RVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRTINV 222 (255)
T ss_dssp GGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEEECC
T ss_pred HHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEEEEE
Confidence 4677777767788889999887667778888999999 887766554
No 354
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=27.30 E-value=91 Score=17.71 Aligned_cols=14 Identities=0% Similarity=-0.303 Sum_probs=6.5
Q ss_pred HHHHHCCccceeecc
Q 032621 97 ADLLGAGFKHVSNFG 111 (137)
Q Consensus 97 ~~l~~~G~~~v~~l~ 111 (137)
..+....++ +.+++
T Consensus 39 ~~~~~~~~d-lvi~D 52 (124)
T 1mb3_A 39 SIARENKPD-LILMD 52 (124)
T ss_dssp HHHHHHCCS-EEEEE
T ss_pred HHHhcCCCC-EEEEe
Confidence 344444443 55544
No 355
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=27.26 E-value=93 Score=22.25 Aligned_cols=36 Identities=17% Similarity=0.280 Sum_probs=24.0
Q ss_pred HHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHC-Ccc
Q 032621 69 LKKVRSLCKEEDRLVVGCQSGARSLHATADLLGA-GFK 105 (137)
Q Consensus 69 ~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~-G~~ 105 (137)
.+.+.+.+. ++++++...+|.-|..++..|.+. |++
T Consensus 11 ~~~ir~~v~-~~kvlvalSGGvDSsvla~ll~~~~g~~ 47 (308)
T 2dpl_A 11 VREIRETVG-DSKAIIALSGGVDSSTAAVLAHKAIGDR 47 (308)
T ss_dssp HHHHHHHHT-TSCEEEECCSSHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHhC-CCCEEEEEeChHHHHHHHHHHHHhhCCC
Confidence 334444343 456777777888888888888775 864
No 356
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=27.22 E-value=77 Score=19.71 Aligned_cols=33 Identities=12% Similarity=0.073 Sum_probs=23.9
Q ss_pred CCcEEEEeCC---CchHHHHHHHHHHCCccceeeccc
Q 032621 79 EDRLVVGCQS---GARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 79 ~~~iv~~c~~---g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
.+.|.++..+ |.-+...+..|.+.||+ |+.++-
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~-v~~vnp 48 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYR-VLPVNP 48 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCE-EEEECG
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCE-EEEeCC
Confidence 3557777665 45577888889999996 876654
No 357
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=27.18 E-value=1.2e+02 Score=19.21 Aligned_cols=40 Identities=25% Similarity=0.246 Sum_probs=27.3
Q ss_pred HHhhccCCCcEEEEeCCCch--HHHHHHHHHHCCccceeeccc
Q 032621 72 VRSLCKEEDRLVVGCQSGAR--SLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 72 ~~~~~~~~~~iv~~c~~g~r--a~~~~~~l~~~G~~~v~~l~G 112 (137)
+...+.+++-++++..+|.. ...++..+++.|.+ +..+.+
T Consensus 104 ~~~~~~~~Dvvi~iS~sG~t~~~~~~~~~ak~~g~~-vi~iT~ 145 (188)
T 1tk9_A 104 VEALGNEKDVLIGISTSGKSPNVLEALKKAKELNML-CLGLSG 145 (188)
T ss_dssp HHHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred HHHhCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 33335777878888888874 45667788889986 544443
No 358
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=27.09 E-value=81 Score=19.00 Aligned_cols=14 Identities=7% Similarity=-0.142 Sum_probs=6.5
Q ss_pred HHHHHCCccceeecc
Q 032621 97 ADLLGAGFKHVSNFG 111 (137)
Q Consensus 97 ~~l~~~G~~~v~~l~ 111 (137)
..+....++ +.+++
T Consensus 52 ~~l~~~~~d-lvi~D 65 (153)
T 3hv2_A 52 QLLASREVD-LVISA 65 (153)
T ss_dssp HHHHHSCCS-EEEEE
T ss_pred HHHHcCCCC-EEEEe
Confidence 344444443 55543
No 359
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=26.97 E-value=86 Score=22.23 Aligned_cols=64 Identities=13% Similarity=0.126 Sum_probs=35.0
Q ss_pred eCccccccCCCCCCCChHHHHHHHhhccCCC----cEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSLCKEED----RLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~~~~~~----~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
+.+-.+.+.+.+.+...-....+......+. ..|+.+.+|..+..+|...+..|++-+.++..+
T Consensus 33 i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g~~vv~assGN~g~alA~~a~~~G~~~~iv~p~~ 100 (313)
T 2q3b_A 33 IVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPDTIILEPTSGNTGIALAMVCAARGYRCVLTMPET 100 (313)
T ss_dssp EEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETT
T ss_pred EEEEehhcCCCCcHHHHHHHHHHHHHHHcCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 5555555666554432222222222222221 345557788888888888888999744445444
No 360
>4f11_A Gamma-aminobutyric acid type B receptor subunit 2; venus flytrap module, G-protein coupled receptor, signaling; 2.38A {Homo sapiens} PDB: 4f12_A*
Probab=26.77 E-value=66 Score=23.51 Aligned_cols=44 Identities=11% Similarity=0.043 Sum_probs=29.3
Q ss_pred HHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccc---eeecccc
Q 032621 70 KKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKH---VSNFGGG 113 (137)
Q Consensus 70 ~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~---v~~l~GG 113 (137)
..+.++...+..+|++|..+..+..+...+++.|+.. +.+..++
T Consensus 197 ~~l~~i~~~~~~vii~~~~~~~~~~~~~~a~~~g~~~~~~~~i~~~~ 243 (433)
T 4f11_A 197 TSVKKLKGNDVRIILGQFDQNMAAKVFCCAYEENMYGSKYQWIIPGW 243 (433)
T ss_dssp HHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHTTCCSTTCEEEEESC
T ss_pred HHHHHHhhCCCeEEEEeCcHHHHHHHHHHHHHcCCCCCCeEEEEcCc
Confidence 3333332345567777777778888888899999875 5555555
No 361
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=26.58 E-value=74 Score=22.69 Aligned_cols=30 Identities=17% Similarity=0.013 Sum_probs=23.4
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
.|+|+ .+|.-...+|..|.+.|++ |.+++-
T Consensus 19 dvvII-GgG~~Gl~~A~~La~~G~~-V~llE~ 48 (382)
T 1ryi_A 19 EAVVI-GGGIIGSAIAYYLAKENKN-TALFES 48 (382)
T ss_dssp EEEEE-CCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CEEEE-CcCHHHHHHHHHHHhCCCc-EEEEeC
Confidence 35554 6788888899999999985 888874
No 362
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=26.52 E-value=1.3e+02 Score=19.88 Aligned_cols=43 Identities=33% Similarity=0.366 Sum_probs=28.5
Q ss_pred HHHHHhhccCCCcEEEEeCCCch--HHHHHHHHHHCCccceeeccc
Q 032621 69 LKKVRSLCKEEDRLVVGCQSGAR--SLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 69 ~~~~~~~~~~~~~iv~~c~~g~r--a~~~~~~l~~~G~~~v~~l~G 112 (137)
...+...+.+++-+++++.+|.. ...++..+++.|.+ +..+.+
T Consensus 105 ~~~l~~~~~~~Dvvi~iS~SG~t~~~~~~~~~ak~~g~~-vi~iT~ 149 (201)
T 3trj_A 105 AKQVAALGNEDDILLVITTSGDSENILSAVEEAHDLEMK-VIALTG 149 (201)
T ss_dssp HHHHHHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred HHHHHhhCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCc-EEEEEC
Confidence 33444435677778888888874 55667788889986 555443
No 363
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=26.51 E-value=97 Score=21.31 Aligned_cols=24 Identities=25% Similarity=0.284 Sum_probs=17.8
Q ss_pred CCchHHHHHHHHHHCCccceeeccc
Q 032621 88 SGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 88 ~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
+|......+..|.+.|++ |.++.|
T Consensus 33 Sg~iG~aiA~~~~~~Ga~-V~l~~~ 56 (226)
T 1u7z_A 33 SGKMGFAIAAAAARRGAN-VTLVSG 56 (226)
T ss_dssp CSHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred ccHHHHHHHHHHHHCCCE-EEEEEC
Confidence 366788888888889986 766544
No 364
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=26.49 E-value=87 Score=22.13 Aligned_cols=33 Identities=12% Similarity=0.082 Sum_probs=23.3
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
.++++++.. .|.-+..++..|.+.|+.+|+++.
T Consensus 116 ~~k~vlvlG-aGg~g~aia~~L~~~G~~~v~v~~ 148 (277)
T 3don_A 116 EDAYILILG-AGGASKGIANELYKIVRPTLTVAN 148 (277)
T ss_dssp GGCCEEEEC-CSHHHHHHHHHHHTTCCSCCEEEC
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEe
Confidence 345666664 466777788889999997677654
No 365
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=26.49 E-value=80 Score=23.32 Aligned_cols=49 Identities=10% Similarity=-0.006 Sum_probs=31.0
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHH-----C---CccceeeccccHHH
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLG-----A---GFKHVSNFGGGHMA 116 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~-----~---G~~~v~~l~GG~~~ 116 (137)
++.+++.+..+.+.. |++|++|..|-.++-.+.. . |-+.|...+++|.+
T Consensus 95 ~la~~l~~~~~~~~~-v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg 151 (452)
T 3n5m_A 95 KLAEKLNEWLGGEYV-IFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHG 151 (452)
T ss_dssp HHHHHHHHHHTSCEE-EEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCC
T ss_pred HHHHHHHHhCCCCce-EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCC
Confidence 455566555433444 8888999887777665543 3 44567777776654
No 366
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine phosphatase, human, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=26.48 E-value=96 Score=22.13 Aligned_cols=18 Identities=28% Similarity=0.464 Sum_probs=13.6
Q ss_pred CCCcEEEEeCCCc-hHHHH
Q 032621 78 EEDRLVVGCQSGA-RSLHA 95 (137)
Q Consensus 78 ~~~~iv~~c~~g~-ra~~~ 95 (137)
...+||++|..|. |+...
T Consensus 225 ~~~PivVHCsaGvGRTGtf 243 (303)
T 2oc3_A 225 GPEPLCVHCSAGCGRTGVL 243 (303)
T ss_dssp SCCCEEEECSSSSHHHHHH
T ss_pred CCCcEEEEECCCCcceeEE
Confidence 4578999999886 65444
No 367
>2kyr_A Fructose-like phosphotransferase enzyme IIB compo; ALP protein, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=26.39 E-value=98 Score=18.88 Aligned_cols=26 Identities=27% Similarity=0.505 Sum_probs=18.0
Q ss_pred EEEeCCCc-hHHHHHHHHH----HCCccceee
Q 032621 83 VVGCQSGA-RSLHATADLL----GAGFKHVSN 109 (137)
Q Consensus 83 v~~c~~g~-ra~~~~~~l~----~~G~~~v~~ 109 (137)
|.-|.+|. .+..++..|. ++||+ +.+
T Consensus 11 VTaCptGiAHTyMAAeaL~~aA~~~G~~-ikV 41 (111)
T 2kyr_A 11 LCACPMGLAHTFMAAQALEEAAVEAGYE-VKI 41 (111)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHHHTSSE-EEE
T ss_pred EEcCCCcHHHHHHHHHHHHHHHHHCCCe-EEE
Confidence 58899997 5666666654 58886 554
No 368
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=26.37 E-value=69 Score=23.13 Aligned_cols=29 Identities=21% Similarity=0.204 Sum_probs=22.1
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
|++...|.-...+|..|.+.|++ |.+++-
T Consensus 7 VvIIGaG~~Gl~~A~~La~~G~~-V~vlE~ 35 (397)
T 2oln_A 7 VVVVGGGPVGLATAWQVAERGHR-VLVLER 35 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred EEEECCCHHHHHHHHHHHHCCCe-EEEEeC
Confidence 34446788888888999999985 888764
No 369
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=26.37 E-value=1.6e+02 Score=20.58 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=24.2
Q ss_pred CCcEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 79 EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
++.+++. ..|.-+..++..|.+.|..+|+++.--
T Consensus 120 ~k~~lvl-GaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLL-GAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEE-CCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEE-CccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4556555 446667777888999998778876543
No 370
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=26.32 E-value=87 Score=23.14 Aligned_cols=63 Identities=11% Similarity=0.054 Sum_probs=34.6
Q ss_pred eCccccccCCCCCCCChHHHHHHHhhccCCCcEEEE-eCCCchHHHHHHHHHHCCccceeeccc
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVG-CQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~-c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
+.+-.+.+.+.+.+........+......++.-++. +.+|..+..+|...+.+|++-+.++..
T Consensus 72 i~lK~E~l~ptGSfK~R~a~~~~~~a~~~g~~~vi~e~ssGNhg~a~A~aa~~~G~~~~i~mp~ 135 (396)
T 1qop_B 72 LYLKREDLLHGGAHKTNQVLGQALLAKRMGKSEIIAETGAGQHGVASALASALLGLKCRIYMGA 135 (396)
T ss_dssp EEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCEEEEEESSSHHHHHHHHHHHHHTCEEEEEEEH
T ss_pred EEEEeccCCCCCcHHHHHHHHHHHHHHHcCcCEEEEecCchHHHHHHHHHHHHCCCcEEEEEcC
Confidence 566666666665543221111222111233344444 678888888888888899973334443
No 371
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=26.30 E-value=77 Score=18.67 Aligned_cols=41 Identities=20% Similarity=0.190 Sum_probs=25.4
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceee
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSN 109 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~ 109 (137)
...+.+.++ ..+..+.+..+.......+..+++..||+ +..
T Consensus 43 ktkkaL~~l-~~Ge~L~Vl~dd~~a~~dIp~~~~~~G~~-v~~ 83 (97)
T 1je3_A 43 ATLEAMPQL-KKGEILEVVSDCPQSINNIPLDARNHGYT-VLD 83 (97)
T ss_dssp HHHHHTTTC-CSSCEEEEEEBCSSSSCHHHHHHHHHTCS-EEE
T ss_pred HHHHHHHcC-CCCCEEEEEECCcchHHHHHHHHHHCCCE-EEE
Confidence 344445443 66776666666554445667888899987 443
No 372
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=26.29 E-value=44 Score=23.07 Aligned_cols=46 Identities=13% Similarity=0.245 Sum_probs=34.0
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
.+...+...+.++..+++++............|.+.||..+..+.-
T Consensus 194 ~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~ 239 (277)
T 1o54_A 194 NYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIRIEVWES 239 (277)
T ss_dssp GTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEEEECC
T ss_pred HHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeEEEEE
Confidence 5666666667788888888876656677778888899986665543
No 373
>1z3i_X Similar to RAD54-like; recombination ATPase helicase, recombination-DNA binding COM; 3.00A {Danio rerio} SCOP: c.37.1.19 c.37.1.19
Probab=26.27 E-value=65 Score=25.56 Aligned_cols=36 Identities=8% Similarity=-0.031 Sum_probs=30.6
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
.+.+++|+|+.-.........|...|+. +..++|+.
T Consensus 415 ~~~k~lIFs~~~~~~~~l~~~l~~~g~~-~~~l~G~~ 450 (644)
T 1z3i_X 415 TSDKVVLVSNYTQTLDLFEKLCRNRRYL-YVRLDGTM 450 (644)
T ss_dssp CCCEEEEEESCHHHHHHHHHHHHHHTCC-EEEECSSC
T ss_pred CCCEEEEEEccHHHHHHHHHHHHHCCCC-EEEEeCCC
Confidence 5778999999877788888899999996 77889985
No 374
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=26.18 E-value=82 Score=23.76 Aligned_cols=50 Identities=8% Similarity=0.040 Sum_probs=30.5
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHC--------CccceeeccccHHH
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGA--------GFKHVSNFGGGHMA 116 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~--------G~~~v~~l~GG~~~ 116 (137)
++.+++.+..+.+..-|++|++|..|-.++-.+... |-+.|..++++|.+
T Consensus 103 ~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg 160 (472)
T 3hmu_A 103 ALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHG 160 (472)
T ss_dssp HHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCC
T ss_pred HHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCC
Confidence 456666655433444688889998876666554432 44557777766543
No 375
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=26.03 E-value=1.1e+02 Score=18.28 Aligned_cols=9 Identities=22% Similarity=0.386 Sum_probs=3.3
Q ss_pred HHHHHHCCc
Q 032621 96 TADLLGAGF 104 (137)
Q Consensus 96 ~~~l~~~G~ 104 (137)
...|...|+
T Consensus 21 ~~~L~~~g~ 29 (152)
T 3heb_A 21 EKNIRRAGV 29 (152)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHhCCC
Confidence 333333333
No 376
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=26.02 E-value=87 Score=18.29 Aligned_cols=16 Identities=13% Similarity=-0.033 Sum_probs=7.7
Q ss_pred HHHHHHHCCccceeecc
Q 032621 95 ATADLLGAGFKHVSNFG 111 (137)
Q Consensus 95 ~~~~l~~~G~~~v~~l~ 111 (137)
+...+....++ +.+++
T Consensus 39 a~~~l~~~~~d-lvi~d 54 (140)
T 2qr3_A 39 LSTVLREENPE-VVLLD 54 (140)
T ss_dssp HHHHHHHSCEE-EEEEE
T ss_pred HHHHHHcCCCC-EEEEe
Confidence 33444555543 65554
No 377
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=26.02 E-value=75 Score=22.84 Aligned_cols=29 Identities=17% Similarity=0.087 Sum_probs=21.4
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
+|+|+ .+|.....++..++++||+ +..++
T Consensus 3 ~I~il-Ggg~~g~~~~~~Ak~~G~~-vv~vd 31 (363)
T 4ffl_A 3 TICLV-GGKLQGFEAAYLSKKAGMK-VVLVD 31 (363)
T ss_dssp EEEEE-CCSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred EEEEE-CCCHHHHHHHHHHHHCCCE-EEEEe
Confidence 45555 5677888888899999997 66655
No 378
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=26.00 E-value=65 Score=23.43 Aligned_cols=30 Identities=20% Similarity=0.319 Sum_probs=23.0
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
.|+|+ ..|.-...+|..|.+.|++ |.+++-
T Consensus 25 dV~IV-GaG~aGl~~A~~La~~G~~-V~v~E~ 54 (407)
T 3rp8_A 25 KAIVI-GAGIGGLSAAVALKQSGID-CDVYEA 54 (407)
T ss_dssp EEEEE-CCSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred EEEEE-CCCHHHHHHHHHHHhCCCC-EEEEeC
Confidence 45544 6788888899999999996 877763
No 379
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=25.92 E-value=69 Score=23.32 Aligned_cols=28 Identities=32% Similarity=0.326 Sum_probs=22.1
Q ss_pred EEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 84 VGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 84 ~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
++..+|.-...+|..|.+.|++ |.+|+.
T Consensus 4 vVIGaGiaGLsaA~~La~~G~~-V~vlE~ 31 (425)
T 3ka7_A 4 VVIGAGLGGLLSAARLSKAGHE-VEVFER 31 (425)
T ss_dssp EEECCBHHHHHHHHHHHHTTCE-EEEECS
T ss_pred EEECCCHHHHHHHHHHHhCCCc-eEEEeC
Confidence 3446788888999999999985 888764
No 380
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=25.76 E-value=72 Score=23.14 Aligned_cols=63 Identities=13% Similarity=0.076 Sum_probs=35.5
Q ss_pred eCccccccCCCCCCCChHHHHHHHhh-----ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSL-----CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
+.+-.+.+.+.+.+.+.-....+... +.++ ..|+.+.+|..+..+|...+..|++-+.++..+
T Consensus 44 v~~K~E~~~ptGSfKdR~a~~~l~~a~~~g~~~~g-~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~ 111 (343)
T 2pqm_A 44 ILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPG-MEIIESTSGNTGIALCQAGAVFGYRVNIAMPST 111 (343)
T ss_dssp EEEEEGGGSTTSBTHHHHHHHHHHHHHHHTSSCTT-CEEEEECSSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred EEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEECCcHHHHHHHHHHHHcCCCEEEEECCC
Confidence 66666666666554322112222222 1222 356666778888888888888999744445443
No 381
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=25.76 E-value=81 Score=18.75 Aligned_cols=23 Identities=22% Similarity=0.312 Sum_probs=11.7
Q ss_pred cEEEEeCCCchHHHHHHHHHHCC
Q 032621 81 RLVVGCQSGARSLHATADLLGAG 103 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G 103 (137)
.|+++++...........|...|
T Consensus 22 ~ilivdd~~~~~~~l~~~L~~~g 44 (146)
T 4dad_A 22 NILVASEDASRLAHLARLVGDAG 44 (146)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHC
T ss_pred eEEEEeCCHHHHHHHHHHHhhCC
Confidence 35555544444445555555555
No 382
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor phosphatase, human, structural GENO structural genomics consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB: 3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A* 3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A* 3qcn_A
Probab=25.75 E-value=98 Score=22.29 Aligned_cols=19 Identities=26% Similarity=0.466 Sum_probs=13.9
Q ss_pred cCCCcEEEEeCCCc-hHHHH
Q 032621 77 KEEDRLVVGCQSGA-RSLHA 95 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-ra~~~ 95 (137)
....+||+.|..|. |+...
T Consensus 244 ~~~~PivVHCsaGvGRTGtf 263 (320)
T 2h4v_A 244 PETGPVLVHCSAGVGRTGTY 263 (320)
T ss_dssp TTCCCEEEESSSSSHHHHHH
T ss_pred CCCCCEEEECCCCCcHHHHH
Confidence 34678999999876 65443
No 383
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=25.68 E-value=1.4e+02 Score=19.19 Aligned_cols=35 Identities=26% Similarity=0.254 Sum_probs=25.3
Q ss_pred ccCCCcEEEEeCCCch--HHHHHHHHHHCCccceeecc
Q 032621 76 CKEEDRLVVGCQSGAR--SLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~r--a~~~~~~l~~~G~~~v~~l~ 111 (137)
+.+++-+|++..+|.. ...++..+++.|.+ +..+.
T Consensus 114 ~~~~d~vI~iS~SG~t~~~~~~~~~ak~~g~~-vI~IT 150 (198)
T 2xbl_A 114 GNEGDVLIGYSTSGKSPNILAAFREAKAKGMT-CVGFT 150 (198)
T ss_dssp CCTTCEEEEECSSSCCHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCe-EEEEE
Confidence 5677878888888863 46667788889986 44443
No 384
>2jlq_A Serine protease subunit NS3; ribonucleoprotein, nucleotide-binding, viral nucleoprotein, endoplasmic reticulum, helicase, hydrolase; 1.67A {Dengue virus 4} PDB: 2jly_A* 2jls_A* 2jlu_A 2jlv_A* 2jlw_A 2jlx_A* 2jlz_A* 2jlr_A* 2bmf_A 2bhr_A
Probab=25.66 E-value=65 Score=24.22 Aligned_cols=36 Identities=14% Similarity=0.013 Sum_probs=30.4
Q ss_pred CCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHH
Q 032621 79 EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHM 115 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~ 115 (137)
..+++++|++-..+...+..|...|+. +..+.|...
T Consensus 188 ~~~~lVF~~s~~~a~~l~~~L~~~g~~-~~~lh~~~~ 223 (451)
T 2jlq_A 188 QGKTVWFVPSIKAGNDIANCLRKSGKR-VIQLSRKTF 223 (451)
T ss_dssp CSCEEEECSSHHHHHHHHHHHHTTTCC-EEEECTTTH
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHcCCe-EEECCHHHH
Confidence 457999999988899999999999986 778887654
No 385
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=25.63 E-value=1.5e+02 Score=20.16 Aligned_cols=28 Identities=18% Similarity=0.015 Sum_probs=19.8
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCcccee
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~ 108 (137)
.+.+++.+|..+..-+..+.+.|.+-|.
T Consensus 181 ~ipvIA~GGI~t~~d~~~~~~~GadgV~ 208 (232)
T 3igs_A 181 GCRVIAEGRYNSPALAAEAIRYGAWAVT 208 (232)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred CCcEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 4566678898766666777778987443
No 386
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=25.57 E-value=81 Score=22.16 Aligned_cols=31 Identities=19% Similarity=0.174 Sum_probs=23.5
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
.|+|+ .+|.-...+|..|.+.|++ |.+++-+
T Consensus 6 dvvII-G~G~~Gl~~A~~La~~G~~-V~vlE~~ 36 (369)
T 3dme_A 6 DCIVI-GAGVVGLAIARALAAGGHE-VLVAEAA 36 (369)
T ss_dssp EEEEE-CCSHHHHHHHHHHHHTTCC-EEEECSS
T ss_pred CEEEE-CCCHHHHHHHHHHHhCCCe-EEEEeCC
Confidence 34444 6788888889999999995 8888753
No 387
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=25.55 E-value=68 Score=21.96 Aligned_cols=29 Identities=17% Similarity=0.268 Sum_probs=23.1
Q ss_pred EEEEeCCCchHHHHHHHHHHCCcc--ceeec
Q 032621 82 LVVGCQSGARSLHATADLLGAGFK--HVSNF 110 (137)
Q Consensus 82 iv~~c~~g~ra~~~~~~l~~~G~~--~v~~l 110 (137)
++++|....-+..+...|++.|.. ++.++
T Consensus 199 ~~i~~~nD~~A~g~~~al~~~g~~v~di~vv 229 (306)
T 8abp_A 199 WLIVGMNDSTVLGGVRATEGQGFKAADIIGI 229 (306)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred EEEEeCCcHHHHHHHHHHHHcCCCCCceEEE
Confidence 468898888888899999999985 66543
No 388
>2oka_A Hypothetical protein; PAR82, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.50A {Pseudomonas aeruginosa} PDB: 2obk_A
Probab=25.54 E-value=53 Score=19.84 Aligned_cols=19 Identities=16% Similarity=0.125 Sum_probs=12.1
Q ss_pred CcEEEEeCCCchHHHHHHH
Q 032621 80 DRLVVGCQSGARSLHATAD 98 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~~~~~ 98 (137)
+-.|.||.+.....++++.
T Consensus 7 ~V~I~YC~~C~~~~Ra~~l 25 (104)
T 2oka_A 7 EIVITYCTQCQWLLRAAWL 25 (104)
T ss_dssp EEEEEEETTTTCHHHHHHH
T ss_pred EEEEEECCCCCChHHHHHH
Confidence 3468999987654444443
No 389
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=25.40 E-value=75 Score=20.91 Aligned_cols=7 Identities=29% Similarity=0.173 Sum_probs=3.3
Q ss_pred HHHCCcc
Q 032621 99 LLGAGFK 105 (137)
Q Consensus 99 l~~~G~~ 105 (137)
...+|.+
T Consensus 52 a~~lgi~ 58 (219)
T 3bl5_A 52 AEKLGVK 58 (219)
T ss_dssp HHTTCCC
T ss_pred HHHhCCC
Confidence 3345554
No 390
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=25.15 E-value=77 Score=24.14 Aligned_cols=24 Identities=21% Similarity=0.249 Sum_probs=12.4
Q ss_pred EEEEeCCCchHHHHHHHHHHCCcc
Q 032621 82 LVVGCQSGARSLHATADLLGAGFK 105 (137)
Q Consensus 82 iv~~c~~g~ra~~~~~~l~~~G~~ 105 (137)
+|+...+|.-|..++.+|++.|++
T Consensus 17 VVVA~SGGlDSSv~a~~Lke~G~e 40 (421)
T 1vl2_A 17 VVLAYSGGLDTSVILKWLCEKGFD 40 (421)
T ss_dssp EEEECCSSHHHHHHHHHHHHTTCE
T ss_pred EEEEeCCcHHHHHHHHHHHHCCCe
Confidence 333334455555555555555654
No 391
>4gl2_A Interferon-induced helicase C domain-containing P; MDA5, dsRNA, anti-viral signaling, RIG-I, MAVS, oligomerizat helicase, ATPase; HET: ANP; 3.56A {Homo sapiens}
Probab=24.99 E-value=57 Score=25.77 Aligned_cols=34 Identities=12% Similarity=0.135 Sum_probs=27.0
Q ss_pred CCcEEEEeCCCchHHHHHHHHHHC------Cccceeecccc
Q 032621 79 EDRLVVGCQSGARSLHATADLLGA------GFKHVSNFGGG 113 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~~~~l~~~------G~~~v~~l~GG 113 (137)
+..++++|++-..+...+..|... |++ +..+.|+
T Consensus 400 ~~~~IVF~~s~~~~~~l~~~L~~~~~l~~~g~~-~~~lhg~ 439 (699)
T 4gl2_A 400 SARGIIFTKTRQSAYALSQWITENEKFAEVGVK-AHHLIGA 439 (699)
T ss_dssp CCCEEEECSCHHHHHHHHHHHHSSCSCC------CEECCCS
T ss_pred CCcEEEEECcHHHHHHHHHHHHhCccccccCcc-eEEEECC
Confidence 678999999888899999999887 886 7788887
No 392
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=24.95 E-value=1e+02 Score=17.41 Aligned_cols=15 Identities=7% Similarity=-0.261 Sum_probs=7.1
Q ss_pred HHHHHHCCccceeecc
Q 032621 96 TADLLGAGFKHVSNFG 111 (137)
Q Consensus 96 ~~~l~~~G~~~v~~l~ 111 (137)
...+....+ ++.+++
T Consensus 37 ~~~~~~~~~-dlil~D 51 (121)
T 2pl1_A 37 DYYLNEHIP-DIAIVD 51 (121)
T ss_dssp HHHHHHSCC-SEEEEC
T ss_pred HHHHhccCC-CEEEEe
Confidence 334444444 365554
No 393
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=24.93 E-value=91 Score=20.95 Aligned_cols=30 Identities=13% Similarity=0.242 Sum_probs=14.1
Q ss_pred CcEEEEeCCCchHHHHHHHHHHCCccceee
Q 032621 80 DRLVVGCQSGARSLHATADLLGAGFKHVSN 109 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~ 109 (137)
+.++|...+|.-....+..|.+.|+++|..
T Consensus 6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~ 35 (254)
T 1sby_A 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVI 35 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCCSEEEE
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCcEEEE
Confidence 334444334444455555555556543433
No 394
>2p0g_A Selenoprotein W-related protein; VCR75, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Vibrio cholerae}
Probab=24.88 E-value=56 Score=19.79 Aligned_cols=18 Identities=11% Similarity=-0.008 Sum_probs=11.6
Q ss_pred cEEEEeCCCchHHHHHHH
Q 032621 81 RLVVGCQSGARSLHATAD 98 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~ 98 (137)
-.|.||.+.....++++.
T Consensus 6 V~I~YC~~C~w~~Ra~~l 23 (105)
T 2p0g_A 6 IEIYYCRQCNWMLRSAWL 23 (105)
T ss_dssp EEEEEETTTTCHHHHHHH
T ss_pred EEEEECCCCCChHHHHHH
Confidence 358999987654444443
No 395
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=24.86 E-value=64 Score=26.00 Aligned_cols=25 Identities=28% Similarity=0.476 Sum_probs=17.2
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCc-hH
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGA-RS 92 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~-ra 92 (137)
.|...+.. ++++..|++.|..|. |.
T Consensus 221 ~fl~~v~~-l~~~~~i~vHC~AG~GRT 246 (629)
T 3f41_A 221 KFLEFYKS-LPKDAWLHYHCYAGMGRT 246 (629)
T ss_dssp HHHHHHHT-SCTTCEEEEECSSSSHHH
T ss_pred HHHHHHHh-cCCCCCEEEECCCCCCHH
Confidence 34555544 467788999999876 44
No 396
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=24.84 E-value=89 Score=21.41 Aligned_cols=41 Identities=12% Similarity=0.203 Sum_probs=26.9
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeeccc----cHHHHHhC
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG----GHMAWVQN 120 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G----G~~~w~~~ 120 (137)
.+++++++ .+|.-+...+..|.+.|.+ |.+++. .+..+.+.
T Consensus 30 ~gk~VLVV-GgG~va~~ka~~Ll~~GA~-VtVvap~~~~~l~~l~~~ 74 (223)
T 3dfz_A 30 KGRSVLVV-GGGTIATRRIKGFLQEGAA-ITVVAPTVSAEINEWEAK 74 (223)
T ss_dssp TTCCEEEE-CCSHHHHHHHHHHGGGCCC-EEEECSSCCHHHHHHHHT
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHHCCCE-EEEECCCCCHHHHHHHHc
Confidence 34556655 5677888888888888875 777653 24455444
No 397
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=24.83 E-value=84 Score=22.45 Aligned_cols=30 Identities=20% Similarity=0.214 Sum_probs=23.4
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
.|+|+ ..|.-...+|..|.+.|++ |.+++-
T Consensus 7 dVvII-GgGi~Gl~~A~~La~~G~~-V~lle~ 36 (382)
T 1y56_B 7 EIVVI-GGGIVGVTIAHELAKRGEE-VTVIEK 36 (382)
T ss_dssp SEEEE-CCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CEEEE-CCCHHHHHHHHHHHHCCCe-EEEEeC
Confidence 45555 6688888889999999986 888874
No 398
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=24.79 E-value=88 Score=22.59 Aligned_cols=63 Identities=14% Similarity=0.069 Sum_probs=36.5
Q ss_pred eCccccccCCCCCCCChHHHHHHHhh-----ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSL-----CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
+.+-.+.+.+.+.+...-....+... +.+++.+|+.+.+|..+..+|...+.+|++-+.++..
T Consensus 37 i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~ 104 (334)
T 3tbh_A 37 VVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPE 104 (334)
T ss_dssp EEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred EEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECC
Confidence 66666666666644321111222222 2344555566777888888888888889873334443
No 399
>2wv9_A Flavivirin protease NS2B regulatory subunit, FLAV protease NS3 catalytic subunit; nucleotide-binding, capsid protein; 2.75A {Murray valley encephalitis virus}
Probab=24.77 E-value=66 Score=25.93 Aligned_cols=35 Identities=20% Similarity=-0.003 Sum_probs=30.1
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
...+++++|++-..+...+..|...|+. +..+.|.
T Consensus 409 ~~~~~lVF~~s~~~~e~la~~L~~~g~~-v~~lHg~ 443 (673)
T 2wv9_A 409 YAGKTVWFVASVKMSNEIAQCLQRAGKR-VIQLNRK 443 (673)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHTTTCC-EEEECSS
T ss_pred CCCCEEEEECCHHHHHHHHHHHHhCCCe-EEEeChH
Confidence 5678999999988899999999999985 8888874
No 400
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=24.76 E-value=1.4e+02 Score=19.59 Aligned_cols=42 Identities=29% Similarity=0.340 Sum_probs=28.4
Q ss_pred HHHHhhccCCCcEEEEeCCCch--HHHHHHHHHHCCccceeeccc
Q 032621 70 KKVRSLCKEEDRLVVGCQSGAR--SLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 70 ~~~~~~~~~~~~iv~~c~~g~r--a~~~~~~l~~~G~~~v~~l~G 112 (137)
..+...+.+++.+|+++.+|.. ...++..+++.|.+ +..+.+
T Consensus 123 ~~~~~~~~~~DvvI~iS~SG~t~~~i~~~~~ak~~G~~-vIaIT~ 166 (212)
T 2i2w_A 123 RYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMK-VITLTG 166 (212)
T ss_dssp HHHHHHCCTTCEEEEECSSSCCHHHHHHHHHHHHHTCE-EEEEEE
T ss_pred HHHHhcCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCe-EEEEEC
Confidence 3343335778888888888864 46667788889986 544443
No 401
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Probab=24.76 E-value=1e+02 Score=22.50 Aligned_cols=19 Identities=26% Similarity=0.482 Sum_probs=14.0
Q ss_pred cCCCcEEEEeCCCc-hHHHH
Q 032621 77 KEEDRLVVGCQSGA-RSLHA 95 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-ra~~~ 95 (137)
....|||++|..|. |+...
T Consensus 235 ~~~~PiVVHCSAGvGRTGtf 254 (342)
T 3i36_A 235 PPESPILVHCSAGVGRTGTF 254 (342)
T ss_dssp CSSCCEEEESSSSSHHHHHH
T ss_pred CCCCCEEEEcCCCChHHHHH
Confidence 45679999999876 65443
No 402
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=24.75 E-value=82 Score=19.03 Aligned_cols=26 Identities=23% Similarity=0.376 Sum_probs=16.6
Q ss_pred EEEeCCCc-hHHHHHHHHH----HCCccceee
Q 032621 83 VVGCQSGA-RSLHATADLL----GAGFKHVSN 109 (137)
Q Consensus 83 v~~c~~g~-ra~~~~~~l~----~~G~~~v~~ 109 (137)
|.-|.+|. .+..++..|. ++||+ +.+
T Consensus 8 VtaCptGiAhTymAAeaLekaA~~~G~~-ikV 38 (106)
T 2m1z_A 8 VTACATGVAHTYMAAQALKKGAKKMGNL-IKV 38 (106)
T ss_dssp EEECSSCHHHHHHHHHHHHHHHHHHTCE-EEE
T ss_pred EEECCCcHHHHHHHHHHHHHHHHHCCCE-EEE
Confidence 44499997 5555565554 57886 543
No 403
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=24.69 E-value=53 Score=21.12 Aligned_cols=26 Identities=15% Similarity=0.307 Sum_probs=19.5
Q ss_pred ccCCCcEEEEeCCCchHHHHHHHHHH
Q 032621 76 CKEEDRLVVGCQSGARSLHATADLLG 101 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~ra~~~~~~l~~ 101 (137)
+..+++|++.|.++..+......+.+
T Consensus 122 IAGDDTIlvi~r~~~~a~~l~~~l~~ 147 (149)
T 1b4a_A 122 ICGDDTCLIICRTPKDAKKVSNQLLS 147 (149)
T ss_dssp EECSSEEEEEESSHHHHHHHHHHHHT
T ss_pred EecCCEEEEEeCCHHHHHHHHHHHHH
Confidence 45678888888888877777776654
No 404
>2whx_A Serine protease/ntpase/helicase NS3; transcription, hydrolase, ATP-binding, reticulum, nucleotidyltransferase, multifunctional enzyme; HET: ADP; 2.20A {Dengue virus 4} PDB: 2vbc_A 2wzq_A
Probab=24.60 E-value=76 Score=25.20 Aligned_cols=35 Identities=14% Similarity=-0.025 Sum_probs=29.9
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
....++++|++-..+...+..|...|++ +..+.|.
T Consensus 354 ~~~~~LVF~~s~~~a~~l~~~L~~~g~~-v~~lhg~ 388 (618)
T 2whx_A 354 YQGKTVWFVPSIKAGNDIANCLRKSGKR-VIQLSRK 388 (618)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHHTTCC-EEEECTT
T ss_pred CCCCEEEEECChhHHHHHHHHHHHcCCc-EEEEChH
Confidence 3567999999988999999999999986 7788875
No 405
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=24.54 E-value=75 Score=22.37 Aligned_cols=40 Identities=13% Similarity=0.081 Sum_probs=29.5
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccc
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKH 106 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~ 106 (137)
+|...+.++...+..+|+++..+..+..+...+++.|++.
T Consensus 184 d~~~~l~~i~~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~ 223 (353)
T 4gnr_A 184 DFQAALTKMKGKDFDAIVVPGYYNEAGKIVNQARGMGIDK 223 (353)
T ss_dssp CCHHHHHHHHTSCCSEEECCSCHHHHHHHHHHHHHTTCCS
T ss_pred CHHHHHHHHHhcCCCEEEEecCcHHHHHHHHHHHHcCCCC
Confidence 4555555554456668888888888888889999999974
No 406
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Probab=24.52 E-value=1.1e+02 Score=21.83 Aligned_cols=19 Identities=26% Similarity=0.422 Sum_probs=14.3
Q ss_pred cCCCcEEEEeCCCc-hHHHH
Q 032621 77 KEEDRLVVGCQSGA-RSLHA 95 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-ra~~~ 95 (137)
....+||++|..|. |+...
T Consensus 220 ~~~~PivVHCsaGvGRTGtf 239 (297)
T 1jln_A 220 EGRGPVVVHCSAGIGRTGCF 239 (297)
T ss_dssp TTSCCEEEESSSSSHHHHHH
T ss_pred CCCCCEEEEeCCCchhhHHH
Confidence 45679999999886 65544
No 407
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=24.46 E-value=1.8e+02 Score=20.49 Aligned_cols=89 Identities=18% Similarity=0.193 Sum_probs=47.7
Q ss_pred CHHHHHHHhhC----C-CEEEecCChHHHhccCCCCceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCCc
Q 032621 16 DVRAAKNLLES----G-YGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 90 (137)
Q Consensus 16 s~~~~~~~~~~----~-~~viDvR~~~e~~~g~ipga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~ 90 (137)
+.+++.++++. + .+++++.+.+|.....--|+..+-+....+ ..... +-+...++...++. .+.+++.+|.
T Consensus 147 ~~~~l~~l~~~a~~lGl~~lvev~t~ee~~~A~~~Gad~IGv~~r~l-~~~~~-dl~~~~~l~~~v~~--~~pvVaegGI 222 (272)
T 3qja_A 147 EQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDL-MTLDV-DRDCFARIAPGLPS--SVIRIAESGV 222 (272)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEEESBCT-TTCCB-CTTHHHHHGGGSCT--TSEEEEESCC
T ss_pred CHHHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHCCCCEEEECCCcc-ccccc-CHHHHHHHHHhCcc--cCEEEEECCC
Confidence 45555544432 4 468899988776532222343232221100 00111 12344555544333 3566678899
Q ss_pred hHHHHHHHHHHCCcccee
Q 032621 91 RSLHATADLLGAGFKHVS 108 (137)
Q Consensus 91 ra~~~~~~l~~~G~~~v~ 108 (137)
.+..-...+.+.|.+-|.
T Consensus 223 ~t~edv~~l~~~Gadgvl 240 (272)
T 3qja_A 223 RGTADLLAYAGAGADAVL 240 (272)
T ss_dssp CSHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHcCCCEEE
Confidence 888888888899987443
No 408
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A
Probab=24.37 E-value=1.1e+02 Score=21.54 Aligned_cols=19 Identities=26% Similarity=0.363 Sum_probs=14.0
Q ss_pred cCCCcEEEEeCCCc-hHHHH
Q 032621 77 KEEDRLVVGCQSGA-RSLHA 95 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-ra~~~ 95 (137)
....+||++|..|. |+...
T Consensus 216 ~~~~PivVHCsaGvGRTGtf 235 (291)
T 2hc1_A 216 PGAGPTVVHCSAGVGRTGTF 235 (291)
T ss_dssp SCCCCEEEECSSSSHHHHHH
T ss_pred CCCCCEEEEeCCCCchhHHH
Confidence 35679999999886 65443
No 409
>4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi}
Probab=24.29 E-value=1e+02 Score=21.95 Aligned_cols=19 Identities=26% Similarity=0.378 Sum_probs=14.0
Q ss_pred CCCcEEEEeCCCc-hHHHHH
Q 032621 78 EEDRLVVGCQSGA-RSLHAT 96 (137)
Q Consensus 78 ~~~~iv~~c~~g~-ra~~~~ 96 (137)
...+||++|..|. |+....
T Consensus 218 ~~~PivVHCsaGvGRTGtfi 237 (302)
T 4az1_A 218 TTVPVVVHCSAGIGRTGTLI 237 (302)
T ss_dssp TTSCEEEESSSSSSHHHHHH
T ss_pred CCCCEEEECCCCCcHHHHHH
Confidence 5679999999876 655443
No 410
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=24.17 E-value=1.2e+02 Score=18.34 Aligned_cols=24 Identities=17% Similarity=0.119 Sum_probs=10.3
Q ss_pred EEEEeCCCchHHHHHHHHHHCCcc
Q 032621 82 LVVGCQSGARSLHATADLLGAGFK 105 (137)
Q Consensus 82 iv~~c~~g~ra~~~~~~l~~~G~~ 105 (137)
|+++++...........|...||+
T Consensus 39 Ilivdd~~~~~~~l~~~L~~~g~~ 62 (157)
T 3hzh_A 39 VLIVDDSVFTVKQLTQIFTSEGFN 62 (157)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCE
T ss_pred EEEEeCCHHHHHHHHHHHHhCCCe
Confidence 444443333344444444444543
No 411
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=24.12 E-value=1.1e+02 Score=20.16 Aligned_cols=32 Identities=28% Similarity=0.426 Sum_probs=23.5
Q ss_pred CCcEEEEeCCCc----hHHHHHHHHHHCCccceeecc
Q 032621 79 EDRLVVGCQSGA----RSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 79 ~~~iv~~c~~g~----ra~~~~~~l~~~G~~~v~~l~ 111 (137)
..+|++.|-.|. -...++..|...||+ |.+|.
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~-v~~LG 123 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFT-VYNLG 123 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCE-EEECC
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCE-EEECC
Confidence 346888888653 367778889999997 66554
No 412
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=23.90 E-value=62 Score=21.61 Aligned_cols=26 Identities=4% Similarity=-0.001 Sum_probs=21.5
Q ss_pred ccCCCcEEEEeCCCchHHHHHHHHHH
Q 032621 76 CKEEDRLVVGCQSGARSLHATADLLG 101 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~ra~~~~~~l~~ 101 (137)
+..+++|+++|.++..+......+.+
T Consensus 149 IAGDDTIlVi~r~~~~a~~l~~~l~~ 174 (180)
T 3v4g_A 149 VAGDDTIFITPTLTITTEQLFKSVCE 174 (180)
T ss_dssp EECSSEEEEEECTTSCHHHHHHHHHH
T ss_pred EecCCEEEEEeCCHHHHHHHHHHHHH
Confidence 45688999999999988888887765
No 413
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=23.86 E-value=82 Score=22.18 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=23.6
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
+.+.|+|...+|.-...++..|.+.|++ |..+.
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~ 50 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRT-VRGFD 50 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCC-EEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCE-EEEEe
Confidence 4456777777788888888899889985 76553
No 414
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=23.84 E-value=1.2e+02 Score=21.24 Aligned_cols=85 Identities=21% Similarity=0.265 Sum_probs=47.3
Q ss_pred CHHHHHHHhh---C-C-CEEEecCChHHHhccCCC-CceeeCccccccCCCCCCCChHHHHHHHhhccCCCcEEEEeCCC
Q 032621 16 DVRAAKNLLE---S-G-YGYLDVRTAEEFKEGHVD-AAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSG 89 (137)
Q Consensus 16 s~~~~~~~~~---~-~-~~viDvR~~~e~~~g~ip-ga~~inip~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g 89 (137)
+.+++.++++ + | .+++||.+.+|-....-- |+..+-+....+.. ...+ -+....+...++++ ++++|.+|
T Consensus 135 ~~~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~l~t-~~~d-~~~~~~l~~~ip~~--~~vIaEsG 210 (251)
T 1i4n_A 135 TAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRDLDT-FEIK-KNVLWELLPLVPDD--TVVVAESG 210 (251)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBCTTT-CCBC-TTHHHHHGGGSCTT--SEEEEESC
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCccccc-CCCC-HHHHHHHHHhCCCC--CEEEEeCC
Confidence 3345555443 2 4 579999999887653222 55434333211111 1111 13344454444433 56778999
Q ss_pred chHHHHHHHHHHCCcc
Q 032621 90 ARSLHATADLLGAGFK 105 (137)
Q Consensus 90 ~ra~~~~~~l~~~G~~ 105 (137)
..+..-+..+.+. ++
T Consensus 211 I~t~edv~~~~~~-a~ 225 (251)
T 1i4n_A 211 IKDPRELKDLRGK-VN 225 (251)
T ss_dssp CCCGGGHHHHTTT-CS
T ss_pred CCCHHHHHHHHHh-CC
Confidence 9888878888777 65
No 415
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=23.81 E-value=1.5e+02 Score=22.68 Aligned_cols=50 Identities=26% Similarity=0.313 Sum_probs=35.6
Q ss_pred ccCCCcEEEEeC---CCchHHHHHHHHHHCCcccee---ec---cccHHHHHhCCCcee
Q 032621 76 CKEEDRLVVGCQ---SGARSLHATADLLGAGFKHVS---NF---GGGHMAWVQNGLKVK 125 (137)
Q Consensus 76 ~~~~~~iv~~c~---~g~ra~~~~~~l~~~G~~~v~---~l---~GG~~~w~~~~~p~~ 125 (137)
+.++++|+++++ +|.....+...|++.|.+-+. ++ .||-....+.|.|+.
T Consensus 362 ~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~lvdr~~~g~~~l~~~g~~v~ 420 (453)
T 3qw4_B 362 YKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDRDMGAKAFLNKLGYDFE 420 (453)
T ss_dssp CCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEEEECSSSHHHHHHHTTCCEE
T ss_pred cCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEEEECCcchHHHHHhcCCCEE
Confidence 457888999887 788999999999999976432 22 355666666777764
No 416
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=23.80 E-value=1e+02 Score=17.21 Aligned_cols=15 Identities=0% Similarity=0.217 Sum_probs=7.0
Q ss_pred HHHHHHCCccceeecc
Q 032621 96 TADLLGAGFKHVSNFG 111 (137)
Q Consensus 96 ~~~l~~~G~~~v~~l~ 111 (137)
...+....+ ++.+++
T Consensus 38 ~~~~~~~~~-dlvl~D 52 (116)
T 3a10_A 38 LKKFFSGNY-DLVILD 52 (116)
T ss_dssp HHHHHHSCC-SEEEEC
T ss_pred HHHHhcCCC-CEEEEE
Confidence 334444444 365544
No 417
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=23.76 E-value=1e+02 Score=19.29 Aligned_cols=28 Identities=32% Similarity=0.373 Sum_probs=21.1
Q ss_pred EEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 84 VGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 84 ~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
++..+|.-...++..|.+.|.+ |.+++.
T Consensus 5 vIIGgG~~Gl~~A~~l~~~g~~-v~lie~ 32 (180)
T 2ywl_A 5 IVVGGGPSGLSAALFLARAGLK-VLVLDG 32 (180)
T ss_dssp EEECCSHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred EEECCCHHHHHHHHHHHHCCCc-EEEEeC
Confidence 3446677888888899999985 777764
No 418
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=23.66 E-value=1.2e+02 Score=17.68 Aligned_cols=24 Identities=13% Similarity=0.113 Sum_probs=10.8
Q ss_pred EEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 84 VGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 84 ~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
..|.++. .+...+....++ +.+++
T Consensus 31 ~~~~~~~---~al~~~~~~~~d-lvl~D 54 (132)
T 3crn_A 31 EIAATAG---EGLAKIENEFFN-LALFX 54 (132)
T ss_dssp EEESSHH---HHHHHHHHSCCS-EEEEC
T ss_pred EEeCCHH---HHHHHHhcCCCC-EEEEe
Confidence 3455433 333344444443 65554
No 419
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=23.65 E-value=50 Score=24.44 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=23.5
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
.+.+.++|.|. |.+.....+.++++|++ +..++
T Consensus 3 ~~~k~l~Il~~-~~~~~~i~~aa~~lG~~-vv~v~ 35 (425)
T 3vot_A 3 KRNKNLAIICQ-NKHLPFIFEEAERLGLK-VTFFY 35 (425)
T ss_dssp CCCCEEEEECC-CTTCCHHHHHHHHTTCE-EEEEE
T ss_pred CCCcEEEEECC-ChhHHHHHHHHHHCCCE-EEEEE
Confidence 35677888886 44556777888999997 55554
No 420
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=23.61 E-value=1.5e+02 Score=22.21 Aligned_cols=51 Identities=10% Similarity=0.054 Sum_probs=30.4
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHH--------CCccceeeccccHHHH
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLG--------AGFKHVSNFGGGHMAW 117 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~--------~G~~~v~~l~GG~~~w 117 (137)
++.+++.+..+.+..-|++|++|..|-.++-.+.. -|-+.|..++++|.++
T Consensus 101 ~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~ 159 (476)
T 3i5t_A 101 RLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGS 159 (476)
T ss_dssp HHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCS
T ss_pred HHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcC
Confidence 45566665543344467888888877666554432 3334577777766543
No 421
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=23.40 E-value=1.1e+02 Score=21.86 Aligned_cols=64 Identities=13% Similarity=0.148 Sum_probs=35.0
Q ss_pred eCccccccCCCCCCCChHHHHHHHhh-----ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSL-----CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
+.+-.+.+.+.+.+...-....+... +.++...|+.+.+|..+..+|...+..|++-+.++..+
T Consensus 32 v~~K~E~~~ptGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~ 100 (322)
T 1z7w_A 32 VAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPAS 100 (322)
T ss_dssp EEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETT
T ss_pred EEEEecccCCCCchHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 55555556665544322112222222 22232455556678888888888888998743344443
No 422
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=23.36 E-value=1.1e+02 Score=22.82 Aligned_cols=30 Identities=23% Similarity=0.179 Sum_probs=21.8
Q ss_pred ccCCCcEEEEeCCCc-------hHHHHHHHHHHCCcc
Q 032621 76 CKEEDRLVVGCQSGA-------RSLHATADLLGAGFK 105 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~-------ra~~~~~~l~~~G~~ 105 (137)
+.++++|-|++.++. +-..+...|++.||+
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~ 76 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFK 76 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCE
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCE
Confidence 567888988888753 234566788889996
No 423
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=23.34 E-value=1.3e+02 Score=20.34 Aligned_cols=37 Identities=14% Similarity=0.056 Sum_probs=27.5
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCccceeeccccHHHHH
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMAWV 118 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~w~ 118 (137)
.|+++.+...........|...||+ |.....|-.++.
T Consensus 131 ~ILivdd~~~~~~~l~~~L~~~g~~-v~~a~~~~eal~ 167 (254)
T 2ayx_A 131 MILVVDDHPINRRLLADQLGSLGYQ-CKTANDGVDALN 167 (254)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHTSE-EEEECCSHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCE-EEEECCHHHHHH
Confidence 4788877766777778888889996 777776766653
No 424
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=23.18 E-value=70 Score=22.74 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=23.1
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
..|+-+.+|..+..+|...+..|++-+.++..+
T Consensus 63 ~~vv~~ssGN~g~a~A~~a~~~G~~~~iv~p~~ 95 (316)
T 1y7l_A 63 KEIVDATSGNTGIALAYVAAARGYKITLTMPET 95 (316)
T ss_dssp CEEEESCCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCC
Confidence 456666678888888888888999733344443
No 425
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=22.93 E-value=79 Score=21.61 Aligned_cols=28 Identities=7% Similarity=0.182 Sum_probs=22.7
Q ss_pred cEEEEeC---CCchHHHHHHHHHHCCc-cceee
Q 032621 81 RLVVGCQ---SGARSLHATADLLGAGF-KHVSN 109 (137)
Q Consensus 81 ~iv~~c~---~g~ra~~~~~~l~~~G~-~~v~~ 109 (137)
.+++++. +|..+..+...|++ |. +++.+
T Consensus 135 ~VilvDp~laTG~T~~~ai~~L~~-G~p~~I~~ 166 (216)
T 1xtt_A 135 NVIIADPMIATASTMLKVLEEVVK-ANPKRIYI 166 (216)
T ss_dssp EEEEECSEESSSHHHHHHHHHHGG-GCCSEEEE
T ss_pred eEEEEcCCccchHHHHHHHHHHHh-CCCCeEEE
Confidence 6788776 78889999999999 98 66654
No 426
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=22.91 E-value=96 Score=21.92 Aligned_cols=64 Identities=19% Similarity=0.186 Sum_probs=34.7
Q ss_pred eCccccccCCCCCCCChHHHHHHHhhccCCC----cEEEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 50 FNIPYMFNTPEGRVKNPDFLKKVRSLCKEED----RLVVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 50 inip~~~~~~~~~~~~~~~~~~~~~~~~~~~----~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
+.+-.+.+.+.+.+........+......+. ..|+.+.+|..+..+|...+..|++-+.++..+
T Consensus 31 i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g~~vv~assGN~g~a~A~~a~~~G~~~~iv~p~~ 98 (308)
T 2egu_A 31 VYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKPGDTIVEPTSGNTGIGLAMVAAAKGYKAVLVMPDT 98 (308)
T ss_dssp EEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTTCEEEEECCHHHHHHHHHHHHHHTCEEEEEEESC
T ss_pred EEEEecccCCCCChHHHHHHHHHHHHHHcCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 5565665666554432222222222222222 345557778888888888888998744445443
No 427
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=22.90 E-value=1.3e+02 Score=17.80 Aligned_cols=37 Identities=8% Similarity=-0.005 Sum_probs=25.1
Q ss_pred HHHHHHhhccCCCcEEEEeC------CCchHHHHHHHHHHCCcc
Q 032621 68 FLKKVRSLCKEEDRLVVGCQ------SGARSLHATADLLGAGFK 105 (137)
Q Consensus 68 ~~~~~~~~~~~~~~iv~~c~------~g~ra~~~~~~l~~~G~~ 105 (137)
..+.+...+ .+.+|++|.. .+..+..+..+|.+.|++
T Consensus 5 ~~~~v~~~i-~~~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~ 47 (111)
T 3zyw_A 5 LNLRLKKLT-HAAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQ 47 (111)
T ss_dssp HHHHHHHHH-TSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHH-hcCCEEEEEecCCCCCcchhHHHHHHHHHHcCCC
Confidence 344555543 4567778774 455788888899988865
No 428
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human tyrosine phosphatase catalytic domain, LC-PTP, hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A 2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A* 3d42_A* 2a3k_A
Probab=22.87 E-value=1.2e+02 Score=21.65 Aligned_cols=19 Identities=26% Similarity=0.417 Sum_probs=14.0
Q ss_pred cCCCcEEEEeCCCc-hHHHH
Q 032621 77 KEEDRLVVGCQSGA-RSLHA 95 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-ra~~~ 95 (137)
....+||+.|..|. |+...
T Consensus 231 ~~~~PIvVHCsaGvGRTGtf 250 (309)
T 1zc0_A 231 AHPGPIVVHCSAGIGRTGCF 250 (309)
T ss_dssp SSCCCEEEEESSSSHHHHHH
T ss_pred CCCCCEEEEeCCCcchhHHH
Confidence 34678999999886 65444
No 429
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=22.77 E-value=1.2e+02 Score=22.16 Aligned_cols=32 Identities=13% Similarity=0.333 Sum_probs=23.4
Q ss_pred CcEEEEeCCCchHHHHHHHHHHCCcc-ceeeccc
Q 032621 80 DRLVVGCQSGARSLHATADLLGAGFK-HVSNFGG 112 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~~~~~l~~~G~~-~v~~l~G 112 (137)
+.|+|+ ..|.-...+|..|.+.|++ +|.+++-
T Consensus 2 k~vvII-GaG~aGl~aA~~L~~~g~~~~V~lie~ 34 (404)
T 3fg2_P 2 DTVLIA-GAGHAGFQVAVSLRQAKYPGRIALIND 34 (404)
T ss_dssp CCEEEE-CCSHHHHHHHHHHHHTTCCSCEEEECC
T ss_pred CCEEEE-cChHHHHHHHHHHHhhCcCCCEEEEeC
Confidence 345555 5677788888999999985 5777754
No 430
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=22.70 E-value=96 Score=22.39 Aligned_cols=29 Identities=17% Similarity=0.002 Sum_probs=21.9
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
|++...|.-...+|..|.+.|++ |.+++-
T Consensus 9 VvIVGaG~aGl~~A~~L~~~G~~-V~viE~ 37 (399)
T 2x3n_A 9 VLINGCGIGGAMLAYLLGRQGHR-VVVVEQ 37 (399)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred EEEECcCHHHHHHHHHHHhCCCc-EEEEeC
Confidence 44446688888888899999986 777763
No 431
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=22.70 E-value=1.2e+02 Score=17.36 Aligned_cols=40 Identities=13% Similarity=0.081 Sum_probs=27.4
Q ss_pred HHHHHHhhcc-CCCcEEEEeCCCchHHHHHHHHHHCCccceee
Q 032621 68 FLKKVRSLCK-EEDRLVVGCQSGARSLHATADLLGAGFKHVSN 109 (137)
Q Consensus 68 ~~~~~~~~~~-~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~ 109 (137)
....+.++ . .+..+.+..+.......+..+++..||+ +..
T Consensus 18 ~kkal~~l-~~~G~~L~V~~dd~~a~~dI~~~~~~~G~~-v~~ 58 (87)
T 3hz7_A 18 AKKALAEL-GEAGGVVTVLVDNDISRQNLQKMAEGMGYQ-SEY 58 (87)
T ss_dssp HHHHHHTT-GGGCCEEEEEESSHHHHHHHHHHHHHHTCE-EEE
T ss_pred HHHHHHhc-cCCCCEEEEEECCccHHHHHHHHHHHCCCE-EEE
Confidence 34445443 4 6777777777666667788899999996 443
No 432
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=22.66 E-value=1.2e+02 Score=20.98 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=23.0
Q ss_pred CCcEEEEeCCCc----hHHHHHHHHHHCCccceeec
Q 032621 79 EDRLVVGCQSGA----RSLHATADLLGAGFKHVSNF 110 (137)
Q Consensus 79 ~~~iv~~c~~g~----ra~~~~~~l~~~G~~~v~~l 110 (137)
..+|++.|-.|. -...++..|...||+ |.+|
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~-Vi~L 157 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYN-VVDL 157 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCE-EEEC
Confidence 456888888653 367778889999997 6544
No 433
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=22.61 E-value=1e+02 Score=21.94 Aligned_cols=29 Identities=21% Similarity=0.237 Sum_probs=22.5
Q ss_pred EEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 82 LVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 82 iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
|+|+ ..|.-...+|..|.+.|++ |.+++-
T Consensus 6 vvII-GaG~~Gl~~A~~La~~G~~-V~vie~ 34 (389)
T 2gf3_A 6 VIVV-GAGSMGMAAGYQLAKQGVK-TLLVDA 34 (389)
T ss_dssp EEEE-CCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred EEEE-CCCHHHHHHHHHHHhCCCe-EEEEeC
Confidence 4444 5688888889999999985 888874
No 434
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=22.53 E-value=1.1e+02 Score=20.26 Aligned_cols=31 Identities=19% Similarity=0.106 Sum_probs=17.7
Q ss_pred CcEEEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 80 DRLVVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
+.++|...+|.-....+..|.+.|++ |..+.
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G~~-V~~~~ 38 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASGAK-VVAVT 38 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCE-EEEEe
Confidence 44555555555556666666666764 55443
No 435
>3sm9_A Mglur3, metabotropic glutamate receptor 3; structural genomics, structural genomics consortium, SGC, CE membrane, G-protein coupled receptor; HET: Z99; 2.26A {Homo sapiens}
Probab=22.52 E-value=2e+02 Score=21.67 Aligned_cols=49 Identities=20% Similarity=0.100 Sum_probs=30.8
Q ss_pred hHHHHHHHhh-ccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccccH
Q 032621 66 PDFLKKVRSL-CKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGH 114 (137)
Q Consensus 66 ~~~~~~~~~~-~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~ 114 (137)
.++...+.+. ...+..+|+++..+..+......+.+.|...+.+...++
T Consensus 229 ~d~~~~l~~~i~~s~a~vIi~~~~~~~~~~l~~~~~~~g~~~~wI~s~~w 278 (479)
T 3sm9_A 229 KSYDSVIRELLQKPNARVVVLFMRSDDSRELIAAASRANASFTWVASDGW 278 (479)
T ss_dssp HHHHHHHHHHHTCTTCCEEEEECCHHHHHHHHHHHHHTTCCCEEEECTTT
T ss_pred HHHHHHHHHHHhcCCCeEEEEEcChHHHHHHHHHHHHhCCEEEEEEechh
Confidence 3565555333 234456666666666777778888899998555555444
No 436
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=22.50 E-value=1.1e+02 Score=19.09 Aligned_cols=33 Identities=15% Similarity=0.108 Sum_probs=23.6
Q ss_pred CCcEEEEeCC---CchHHHHHHHHHHCCccceeeccc
Q 032621 79 EDRLVVGCQS---GARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 79 ~~~iv~~c~~---g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
.+.|.++..+ |.-+...+..|.+.||+ |+.++-
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~-v~~Vnp 57 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYD-VYPVNP 57 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCE-EEEECT
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCE-EEEECC
Confidence 4567777665 45567778889999995 776653
No 437
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=22.49 E-value=84 Score=19.57 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=26.0
Q ss_pred HHHHHHHhhccCCCcEEEEeC------CCchHHHHHHHHHHCCcc
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQ------SGARSLHATADLLGAGFK 105 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~------~g~ra~~~~~~l~~~G~~ 105 (137)
+..+.+...+ ...+|++|.. .+..+..+..+|.+.|++
T Consensus 23 ~~~~~v~~~i-~~~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv~ 66 (135)
T 2wci_A 23 TTIEKIQRQI-AENPILLYMKGSPKLPSCGFSAQAVQALAACGER 66 (135)
T ss_dssp HHHHHHHHHH-HHCSEEEEESBCSSSBSSHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHh-ccCCEEEEEEecCCCCCCccHHHHHHHHHHcCCc
Confidence 4455555553 3346888876 456788888899988875
No 438
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=22.38 E-value=98 Score=23.78 Aligned_cols=30 Identities=27% Similarity=0.246 Sum_probs=23.5
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
+++..+|.-...+|..|.+.|++ |.+|+.|
T Consensus 10 ~iIvG~G~aG~~~A~~L~~~g~~-VlvlE~g 39 (546)
T 1kdg_A 10 YIIVGAGPGGIIAADRLSEAGKK-VLLLERG 39 (546)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEECSS
T ss_pred EEEECcCHHHHHHHHHHHhCCCe-EEEEeCC
Confidence 44456788888889999999985 8888766
No 439
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=22.35 E-value=88 Score=21.68 Aligned_cols=33 Identities=12% Similarity=0.023 Sum_probs=21.4
Q ss_pred cCCCcEEEEeCCCchHHHHHHHHHHCCccceeec
Q 032621 77 KEEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 110 (137)
Q Consensus 77 ~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l 110 (137)
.+.+.|++-..+|.-...++..|.+.|++ |..+
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~-V~~~ 42 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVE-VFGT 42 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCE-EEEE
Confidence 35566777766777777777778778874 6554
No 440
>4dfc_B Uvrabc system protein A; alpha/beta domains, DNA repair, ATP binding, DNA binding, NU excision repair, hydrolase-DNA binding protein complex; 2.80A {Escherichia coli}
Probab=22.26 E-value=66 Score=20.03 Aligned_cols=44 Identities=20% Similarity=0.326 Sum_probs=28.4
Q ss_pred hHHHHHHHhhccCCCcEEEEeC-----CCchHHHHHHHHHHCCccceeeccc
Q 032621 66 PDFLKKVRSLCKEEDRLVVGCQ-----SGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 66 ~~~~~~~~~~~~~~~~iv~~c~-----~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
.+....+..+ +.++++++.+. .|. -......|++.||.++.+ +|
T Consensus 9 ~qivd~il~~-~egtki~iLAPvv~~rKg~-~~~ll~~l~~~Gf~Rvrv-DG 57 (126)
T 4dfc_B 9 SQMVDNVLSQ-PEGKRLMLLAPIIKERKGE-HTKTLENLASQGYIRARI-DG 57 (126)
T ss_dssp HHHHHHTTSS-CTTCCEEEEEEEEEEEESC-CHHHHHHHHHHTCCEEEE-TT
T ss_pred HHHHHHHHhC-CCCCEEEEEeEEEeCCCCc-HHHHHHHHHhCCCeEEEE-CC
Confidence 3555555554 67788888777 222 345667788899987754 54
No 441
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=22.25 E-value=86 Score=22.73 Aligned_cols=30 Identities=23% Similarity=0.227 Sum_probs=22.2
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
.|+|+ ..|.-...+|..|.+.|++ |.+++-
T Consensus 7 dVvII-GgG~aGl~~A~~La~~G~~-V~v~E~ 36 (421)
T 3nix_A 7 DVLVI-GAGPAGTVAASLVNKSGFK-VKIVEK 36 (421)
T ss_dssp EEEEE-CCSHHHHHHHHHHHTTTCC-EEEECS
T ss_pred cEEEE-CCCHHHHHHHHHHHhCCCC-EEEEeC
Confidence 34444 6677888888899999985 877764
No 442
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=22.10 E-value=83 Score=22.65 Aligned_cols=29 Identities=21% Similarity=0.076 Sum_probs=21.6
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
|++...|.-...+|..|.+.|++ |.+++-
T Consensus 5 V~IvGaG~aGl~~A~~L~~~G~~-v~v~E~ 33 (394)
T 1k0i_A 5 VAIIGAGPSGLLLGQLLHKAGID-NVILER 33 (394)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCC-EEEECS
T ss_pred EEEECCCHHHHHHHHHHHHCCCC-EEEEeC
Confidence 34446677788888889889985 877764
No 443
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.08 E-value=96 Score=18.31 Aligned_cols=41 Identities=10% Similarity=0.049 Sum_probs=17.6
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
.+...+...+....--+..|.++.. +...+....++ +.+++
T Consensus 15 ~~~~~l~~~L~~~g~~v~~~~~~~~---a~~~l~~~~~d-lvllD 55 (137)
T 3cfy_A 15 SLAILYKQYVKDEPYDIFHVETGRD---AIQFIERSKPQ-LIILD 55 (137)
T ss_dssp THHHHHHHHTTTSSSEEEEESSHHH---HHHHHHHHCCS-EEEEC
T ss_pred HHHHHHHHHHHhcCceEEEeCCHHH---HHHHHHhcCCC-EEEEe
Confidence 3444444443332223445554433 33344444443 65554
No 444
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=22.08 E-value=98 Score=23.80 Aligned_cols=28 Identities=18% Similarity=0.099 Sum_probs=22.1
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
|++..+|.....+|..|.+.|++ |.+++
T Consensus 23 v~iiG~G~~g~~~a~~l~~~g~~-v~~~e 50 (475)
T 3p1w_A 23 VIILGTGLKECILSGLLSHYGKK-ILVLD 50 (475)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEC
T ss_pred EEEECCCHHHHHHHHHHHHCCCc-EEEEe
Confidence 45556788888899999999986 77665
No 445
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=22.05 E-value=1.1e+02 Score=18.37 Aligned_cols=6 Identities=0% Similarity=-0.025 Sum_probs=3.1
Q ss_pred ceeecc
Q 032621 106 HVSNFG 111 (137)
Q Consensus 106 ~v~~l~ 111 (137)
++.+++
T Consensus 52 dlvi~d 57 (154)
T 2qsj_A 52 DLILLD 57 (154)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 355554
No 446
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=21.96 E-value=94 Score=22.67 Aligned_cols=29 Identities=28% Similarity=0.196 Sum_probs=22.4
Q ss_pred EEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 82 LVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 82 iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
|+|+ .+|.-...+|..|.+.|++ |.+++-
T Consensus 3 VvVI-GaGiaGLsaA~~La~~G~~-V~vlE~ 31 (421)
T 3nrn_A 3 AVVV-GAGLGGLLAGAFLARNGHE-IIVLEK 31 (421)
T ss_dssp EEEE-SCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred EEEE-CCCHHHHHHHHHHHHCCCe-EEEEeC
Confidence 4444 6788888899999999985 888863
No 447
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=21.96 E-value=74 Score=18.74 Aligned_cols=23 Identities=4% Similarity=-0.151 Sum_probs=10.1
Q ss_pred EEEEeCCCchHHHHHHHHHHCCc
Q 032621 82 LVVGCQSGARSLHATADLLGAGF 104 (137)
Q Consensus 82 iv~~c~~g~ra~~~~~~l~~~G~ 104 (137)
|+++++...........|...||
T Consensus 9 ilivdd~~~~~~~l~~~L~~~g~ 31 (136)
T 3kto_A 9 IYLVDHQKDARAALSKLLSPLDV 31 (136)
T ss_dssp EEEECSCHHHHHHHHHHHTTSSS
T ss_pred EEEEcCCHHHHHHHHHHHHHCCc
Confidence 44444433334444444444454
No 448
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=21.77 E-value=57 Score=23.73 Aligned_cols=42 Identities=29% Similarity=0.286 Sum_probs=32.2
Q ss_pred hHHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 66 PDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 66 ~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
.++.+.+.....++..++.||..| .+-+.|.+.||+ |.-+.|
T Consensus 206 ~e~f~~l~~~~~pgg~laTYtaag----~VRR~L~~aGF~-V~k~~G 247 (308)
T 3vyw_A 206 LDFLSLIKERIDEKGYWVSYSSSL----SVRKSLLTLGFK-VGSSRE 247 (308)
T ss_dssp HHHHHHHHTTEEEEEEEEESCCCH----HHHHHHHHTTCE-EEEEEC
T ss_pred HHHHHHHHHHhCCCcEEEEEeCcH----HHHHHHHHCCCE-EEecCC
Confidence 467777777777888899999764 445678889997 887776
No 449
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=21.76 E-value=1.5e+02 Score=21.94 Aligned_cols=50 Identities=12% Similarity=0.050 Sum_probs=29.8
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHC--------CccceeeccccHHH
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGA--------GFKHVSNFGGGHMA 116 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~--------G~~~v~~l~GG~~~ 116 (137)
++.+++.+..+.+..-|+++++|..+-.++-.+... |-+.|...+++|.+
T Consensus 98 ~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg 155 (459)
T 4a6r_A 98 ELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHG 155 (459)
T ss_dssp HHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCC
T ss_pred HHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCC
Confidence 455666655433444578888888876665544332 43457677766553
No 450
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=21.74 E-value=62 Score=26.06 Aligned_cols=26 Identities=31% Similarity=0.560 Sum_probs=17.9
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCc-hHH
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGA-RSL 93 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~-ra~ 93 (137)
.|...+.. ++++..|++.|..|. |..
T Consensus 519 ~fl~~v~~-lp~~~~v~vHC~aG~GRTt 545 (629)
T 3f41_A 519 EFINFTRT-MPANAWLHFHCQAGAGRTT 545 (629)
T ss_dssp HHHHHHHH-SCTTCEEEEECSSSSHHHH
T ss_pred HHHHHHHh-cCCCCCEEEeCCCCCchHH
Confidence 45555555 467788999999876 543
No 451
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=21.67 E-value=1.2e+02 Score=17.20 Aligned_cols=25 Identities=8% Similarity=-0.008 Sum_probs=10.8
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
+..|.++.. +...+....++ +.+++
T Consensus 30 v~~~~~~~~---a~~~~~~~~~d-lvl~D 54 (124)
T 1srr_A 30 TFQAANGLQ---ALDIVTKERPD-LVLLD 54 (124)
T ss_dssp EEEESSHHH---HHHHHHHHCCS-EEEEE
T ss_pred EEEeCCHHH---HHHHHhccCCC-EEEEe
Confidence 344554433 33334444443 55544
No 452
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=21.56 E-value=1.7e+02 Score=18.83 Aligned_cols=36 Identities=19% Similarity=0.184 Sum_probs=26.2
Q ss_pred ccCCCcEEEEeCCCch--HHHHHHHHHHCCccceeeccc
Q 032621 76 CKEEDRLVVGCQSGAR--SLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~r--a~~~~~~l~~~G~~~v~~l~G 112 (137)
+.+++-+|+++.+|.. ...++..+++.|.+ +..+.+
T Consensus 111 ~~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~-vI~IT~ 148 (199)
T 1x92_A 111 GQPGDVLLAISTSGNSANVIQAIQAAHDREML-VVALTG 148 (199)
T ss_dssp CCTTCEEEEECSSSCCHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred CCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCE-EEEEEC
Confidence 5677778888888873 56677888999987 554443
No 453
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=21.53 E-value=92 Score=22.16 Aligned_cols=31 Identities=29% Similarity=0.334 Sum_probs=23.4
Q ss_pred CcEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 80 DRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
..|+|+ ..|.-...+|..|.+.|++ |.+++-
T Consensus 7 ~dVvVI-G~Gi~Gls~A~~La~~G~~-V~vle~ 37 (363)
T 1c0p_A 7 KRVVVL-GSGVIGLSSALILARKGYS-VHILAR 37 (363)
T ss_dssp CEEEEE-CCSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCEEEE-CCCHHHHHHHHHHHhCCCE-EEEEec
Confidence 345554 6788888888899999985 888874
No 454
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=21.53 E-value=2e+02 Score=19.56 Aligned_cols=56 Identities=13% Similarity=0.067 Sum_probs=33.5
Q ss_pred HHHHHHHhhccCCCcEEEEeCCC-----chHHHHHHHHHHCCccceeecccc---HHHHHhCCCc
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSG-----ARSLHATADLLGAGFKHVSNFGGG---HMAWVQNGLK 123 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g-----~ra~~~~~~l~~~G~~~v~~l~GG---~~~w~~~~~p 123 (137)
+..+.+.+....++.|+++|..| .+.......+.+.|++ +.++.|= ..+....|.|
T Consensus 71 ~~~~~i~~~~~~G~~Va~ls~~GdP~i~~~g~~l~~~l~~~gi~-vevIPGiSs~~aa~a~~G~p 134 (242)
T 1wyz_A 71 EDISGYLKPLAGGASMGVISEAGCPAVADPGADVVAIAQRQKLK-VIPLVGPSSIILSVMASGFN 134 (242)
T ss_dssp HHHHHHHHHHHTTCCEEEECC-------CHHHHHHHHHHHTTCC-EEECCCCCHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHcCCEEEEEecCCCCcccCcHHHHHHHHHHCCCC-EEEeCcHHHHHHHHHHcCCC
Confidence 34444444445678888887533 2345566777788986 8888872 2344445665
No 455
>2fa8_A Hypothetical protein ATU0228; ALPH-beta structure, 4 helix bundle, structural genomics, PS protein structure initiative; 1.90A {Agrobacterium tumefaciens str} SCOP: c.47.1.23
Probab=21.46 E-value=71 Score=19.28 Aligned_cols=18 Identities=17% Similarity=0.025 Sum_probs=11.5
Q ss_pred CcEEEEeCCCchHHHHHH
Q 032621 80 DRLVVGCQSGARSLHATA 97 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~~~~ 97 (137)
+-.|.||.+.....++++
T Consensus 9 ~V~I~YC~~C~~~~Ra~~ 26 (105)
T 2fa8_A 9 RIAIRYCTQCNWLLRAGW 26 (105)
T ss_dssp EEEEEEETTTTCHHHHHH
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 346999998764444443
No 456
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=21.45 E-value=1.1e+02 Score=19.39 Aligned_cols=31 Identities=19% Similarity=0.351 Sum_probs=22.3
Q ss_pred CcEEEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 80 DRLVVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
+.|++...+|.-....+..|.+.|++ |..+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~-V~~~~ 34 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYE-VTVLV 34 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEE
Confidence 45677766777778888888888874 66554
No 457
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=21.33 E-value=1.3e+02 Score=17.57 Aligned_cols=25 Identities=4% Similarity=0.057 Sum_probs=11.2
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
+..|.++.. +...+....+ ++.+++
T Consensus 31 v~~~~~~~~---al~~~~~~~~-dlvllD 55 (136)
T 2qzj_A 31 IDLAYNCEE---AIGKIFSNKY-DLIFLE 55 (136)
T ss_dssp EEEESSHHH---HHHHHHHCCC-SEEEEE
T ss_pred EEEECCHHH---HHHHHHhcCC-CEEEEe
Confidence 344544333 3344444444 365554
No 458
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=21.31 E-value=1.4e+02 Score=21.38 Aligned_cols=43 Identities=5% Similarity=-0.069 Sum_probs=29.0
Q ss_pred HHHHHHHh--hccCCCcEEEEeCCCchHHHHHHHHHHCCccceeec
Q 032621 67 DFLKKVRS--LCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNF 110 (137)
Q Consensus 67 ~~~~~~~~--~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l 110 (137)
++...+.. +...+..+|+++..+..+..+...+++.|++ +.++
T Consensus 185 d~~~~~~~~~l~~~~~dav~~~~~~~~~~~~~~~~~~~g~~-~~~~ 229 (391)
T 3eaf_A 185 EADAERIAREMLAADPDYVWCGNTISSCSLLGRAMAKVGLD-AFLL 229 (391)
T ss_dssp HHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHHHHHTCC-CEEE
T ss_pred CHHHHHHHHHHHHcCCCEEEEecCcHHHHHHHHHHHHCCCC-ceEE
Confidence 66666666 4344455676666667777888888999986 4444
No 459
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=21.25 E-value=43 Score=22.50 Aligned_cols=46 Identities=15% Similarity=0.022 Sum_probs=33.8
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
.+...+...+.++..+++++............|.+.||..+..++-
T Consensus 179 ~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~ 224 (258)
T 2pwy_A 179 KVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRLERVLEV 224 (258)
T ss_dssp GGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceEEEEEe
Confidence 5667776667778888888887656667777788899986665543
No 460
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=21.05 E-value=97 Score=15.83 Aligned_cols=25 Identities=8% Similarity=-0.167 Sum_probs=12.2
Q ss_pred CCCchHHHHHHHHHHCCccceeecc
Q 032621 87 QSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 87 ~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
........+...+.+.++..+.+++
T Consensus 6 ~~~~~~~~a~~~m~~~~~~~~pV~d 30 (70)
T 3fio_A 6 QPKDTVDRVAKILSRNKAGSAVVME 30 (70)
T ss_dssp CTTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 3334444555555555555444444
No 461
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=21.04 E-value=1.2e+02 Score=20.81 Aligned_cols=32 Identities=19% Similarity=0.309 Sum_probs=24.9
Q ss_pred CCcEEEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 79 EDRLVVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
.+.|+|...+|.-...++..|.+.|++ |..+.
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~ 38 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEE-VTVLD 38 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCC-EEEEC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCE-EEEEe
Confidence 456777777788888888999889985 77664
No 462
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=20.97 E-value=1.1e+02 Score=21.28 Aligned_cols=31 Identities=19% Similarity=0.230 Sum_probs=19.9
Q ss_pred CcEEEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 80 DRLVVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 80 ~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
+.|+|...+|.-...++..|.+.|++ |..+.
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G~~-V~~~~ 34 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKGYE-VYGAD 34 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE-EEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE-EEEEE
Confidence 45666655666667777777777774 65543
No 463
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=20.95 E-value=1.3e+02 Score=17.40 Aligned_cols=8 Identities=25% Similarity=0.509 Sum_probs=3.0
Q ss_pred HHHHHCCc
Q 032621 97 ADLLGAGF 104 (137)
Q Consensus 97 ~~l~~~G~ 104 (137)
..|...||
T Consensus 27 ~~L~~~g~ 34 (140)
T 3cg0_A 27 IQLESLGY 34 (140)
T ss_dssp HHHHHHTC
T ss_pred HHHHHCCC
Confidence 33333333
No 464
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=20.93 E-value=1.1e+02 Score=18.23 Aligned_cols=15 Identities=0% Similarity=0.027 Sum_probs=7.2
Q ss_pred HHHHHHCCccceeecc
Q 032621 96 TADLLGAGFKHVSNFG 111 (137)
Q Consensus 96 ~~~l~~~G~~~v~~l~ 111 (137)
...+....++ +.+++
T Consensus 51 l~~~~~~~~d-lvl~D 65 (143)
T 3m6m_D 51 LDAMAEEDYD-AVIVD 65 (143)
T ss_dssp HHHHHHSCCS-EEEEE
T ss_pred HHHHhcCCCC-EEEEe
Confidence 3344445554 55554
No 465
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=20.81 E-value=2.1e+02 Score=19.65 Aligned_cols=30 Identities=20% Similarity=0.310 Sum_probs=22.7
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccce
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHV 107 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v 107 (137)
..+.+++...+|.-|..++..+.+.+.+++
T Consensus 28 ~~~~vvv~lSGGiDSsv~a~l~~~~~~~~~ 57 (249)
T 3fiu_A 28 PAEGFVIGLSGGIDSAVAASLAVKTGLPTT 57 (249)
T ss_dssp TCSEEEEECCSSHHHHHHHHHHHHTTSCEE
T ss_pred CCCCEEEEecCcHHHHHHHHHHHHhCCCCE
Confidence 345677777788888888888888877654
No 466
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=20.71 E-value=1.1e+02 Score=21.73 Aligned_cols=29 Identities=24% Similarity=0.153 Sum_probs=22.3
Q ss_pred EEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 82 LVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 82 iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
|+|+ ..|.-...+|..|.+.|++ |.+++-
T Consensus 5 vvII-G~Gi~Gl~~A~~La~~G~~-V~vle~ 33 (372)
T 2uzz_A 5 LIII-GSGSVGAAAGYYATRAGLN-VLMTDA 33 (372)
T ss_dssp EEES-CTTHHHHHHHHHHHHTTCC-EEEECS
T ss_pred EEEE-CCCHHHHHHHHHHHHCCCe-EEEEec
Confidence 4444 6788888888999999985 888874
No 467
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=20.62 E-value=1.8e+02 Score=18.65 Aligned_cols=42 Identities=21% Similarity=0.307 Sum_probs=28.5
Q ss_pred HHHHhhccCCCcEEEEeCCCch--HHHHHHHHHHCCccceeeccc
Q 032621 70 KKVRSLCKEEDRLVVGCQSGAR--SLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 70 ~~~~~~~~~~~~iv~~c~~g~r--a~~~~~~l~~~G~~~v~~l~G 112 (137)
..+...+.+++-+|+++.+|.. ...++..+++.|.+ +..+.+
T Consensus 101 ~~~~~~~~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~-vI~IT~ 144 (196)
T 2yva_A 101 KQVRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMT-IVALTG 144 (196)
T ss_dssp HHHHHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred HHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 3333335777878888888874 46677788899986 555544
No 468
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=20.61 E-value=1.1e+02 Score=21.53 Aligned_cols=33 Identities=12% Similarity=0.063 Sum_probs=26.1
Q ss_pred CCCcEEEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 78 EEDRLVVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 78 ~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
..+.|+|...+|.-...++..|.+.|++ |..+.
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~ 56 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQV-VIGLD 56 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCE-EEEEe
Confidence 4567888777888888899999999986 76654
No 469
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=20.59 E-value=1.6e+02 Score=18.14 Aligned_cols=18 Identities=22% Similarity=0.327 Sum_probs=8.4
Q ss_pred HHHHHHCCccceeecccc
Q 032621 96 TADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 96 ~~~l~~~G~~~v~~l~GG 113 (137)
...|++.|.+++.++-||
T Consensus 75 i~~l~~~g~~~i~v~vGG 92 (137)
T 1ccw_A 75 RQKCDEAGLEGILLYVGG 92 (137)
T ss_dssp HHHHHHTTCTTCEEEEEE
T ss_pred HHHHHhcCCCCCEEEEEC
Confidence 344444454344444444
No 470
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=20.58 E-value=1.3e+02 Score=20.61 Aligned_cols=37 Identities=16% Similarity=0.176 Sum_probs=26.1
Q ss_pred CCcEEEEeCCCchHHHHHHHHHHCCccceeeccccHHH
Q 032621 79 EDRLVVGCQSGARSLHATADLLGAGFKHVSNFGGGHMA 116 (137)
Q Consensus 79 ~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG~~~ 116 (137)
+..|+++.. |.-...++..|...|+.++.++|.....
T Consensus 28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~ 64 (251)
T 1zud_1 28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVH 64 (251)
T ss_dssp TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCC
T ss_pred cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcc
Confidence 355666544 4455578889999999989988876433
No 471
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=20.55 E-value=1.2e+02 Score=22.57 Aligned_cols=31 Identities=6% Similarity=-0.065 Sum_probs=25.7
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
+-++++..|.-+...+..+..+||+ |.+++.
T Consensus 205 ~rL~IfGAGhva~ala~~a~~lg~~-V~v~D~ 235 (386)
T 2we8_A 205 PRMLVFGAIDFAAAVAQQGAFLGYR-VTVCDA 235 (386)
T ss_dssp CEEEEECCSTHHHHHHHHHHHTTCE-EEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCE-EEEECC
Confidence 4566667889999999999999997 888874
No 472
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase, STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB: 2bij_A 2bv5_A*
Probab=20.54 E-value=1.6e+02 Score=21.02 Aligned_cols=19 Identities=16% Similarity=0.158 Sum_probs=14.1
Q ss_pred cCCCcEEEEeCCCc-hHHHH
Q 032621 77 KEEDRLVVGCQSGA-RSLHA 95 (137)
Q Consensus 77 ~~~~~iv~~c~~g~-ra~~~ 95 (137)
....+||+.|..|. |+...
T Consensus 229 ~~~~PivVHCsaGvGRTGtf 248 (305)
T 2cjz_A 229 PHCAPIIVHSSAGIGRTGCF 248 (305)
T ss_dssp SSCCCEEEEESSSSHHHHHH
T ss_pred CCCCCEEEEeCCCcchhHHH
Confidence 45678999999886 65443
No 473
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=20.54 E-value=1.7e+02 Score=21.48 Aligned_cols=54 Identities=11% Similarity=0.111 Sum_probs=28.5
Q ss_pred HHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHH-H----CC---ccceeeccccHHHHHhC
Q 032621 67 DFLKKVRSLCKEEDRLVVGCQSGARSLHATADLL-G----AG---FKHVSNFGGGHMAWVQN 120 (137)
Q Consensus 67 ~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~-~----~G---~~~v~~l~GG~~~w~~~ 120 (137)
++.+++.+..+.+..-|++|++|..|-.++-.+. . .| -+.|...+++|.++...
T Consensus 91 ~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~ 152 (448)
T 3dod_A 91 QLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIG 152 (448)
T ss_dssp HHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC---------
T ss_pred HHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHH
Confidence 4566666554334456788888888776665443 2 45 35688888888776543
No 474
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=20.42 E-value=93 Score=19.39 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=25.6
Q ss_pred hHHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCc
Q 032621 66 PDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGF 104 (137)
Q Consensus 66 ~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~ 104 (137)
..+...+...+.++..+++..............|.+.||
T Consensus 114 ~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 114 QEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF 152 (192)
T ss_dssp HHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC
Confidence 355666655566666666665544456667778888898
No 475
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=20.41 E-value=1.1e+02 Score=25.24 Aligned_cols=48 Identities=10% Similarity=0.031 Sum_probs=33.8
Q ss_pred CCChHHHHHHHhhccCCCcEEEEeCCC--c--hHHHHHHHHHHCCccceeecccc
Q 032621 63 VKNPDFLKKVRSLCKEEDRLVVGCQSG--A--RSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~iv~~c~~g--~--ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
.+..++.+...+ .+..+|.+|..- . ....+...|++.|.+++.++.||
T Consensus 642 v~~eeiv~aA~e---~~adiVglSsl~~~~~~~~~~vi~~Lr~~G~~dv~VivGG 693 (762)
T 2xij_A 642 QTPREVAQQAVD---ADVHAVGVSTLAAGHKTLVPELIKELNSLGRPDILVMCGG 693 (762)
T ss_dssp CCHHHHHHHHHH---TTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred CCHHHHHHHHHH---cCCCEEEEeeecHHHHHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 334556655543 456688888732 2 45777888999999889999998
No 476
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=20.34 E-value=1.1e+02 Score=22.01 Aligned_cols=30 Identities=27% Similarity=0.269 Sum_probs=22.2
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCccceeeccc
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVSNFGG 112 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~G 112 (137)
.|+|+ ..|.-...+|..|.+.|++ |.+++-
T Consensus 13 dVvIV-GaG~aGl~~A~~L~~~G~~-v~viE~ 42 (379)
T 3alj_A 13 RAEVA-GGGFAGLTAAIALKQNGWD-VRLHEK 42 (379)
T ss_dssp EEEEE-CCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred eEEEE-CCCHHHHHHHHHHHHCCCC-EEEEec
Confidence 44444 6677888888899999985 777763
No 477
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=20.33 E-value=1.3e+02 Score=21.51 Aligned_cols=29 Identities=24% Similarity=0.337 Sum_probs=20.4
Q ss_pred cCCCcEEEEeCCCc--hHHHHHHHHHHCCcc
Q 032621 77 KEEDRLVVGCQSGA--RSLHATADLLGAGFK 105 (137)
Q Consensus 77 ~~~~~iv~~c~~g~--ra~~~~~~l~~~G~~ 105 (137)
..+..++|+|.+.. .+..++..|++.|++
T Consensus 199 ~~g~dv~iva~G~~~~~a~~Aa~~L~~~Gi~ 229 (324)
T 1w85_B 199 REGKDITIIAYGAMVHESLKAAAELEKEGIS 229 (324)
T ss_dssp ECCSSEEEEECTTHHHHHHHHHHHHHHTTCC
T ss_pred ecCCCEEEEEecHHHHHHHHHHHHHHhcCCC
Confidence 34567777776543 577788888888874
No 478
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=20.31 E-value=1.2e+02 Score=20.27 Aligned_cols=10 Identities=10% Similarity=0.262 Sum_probs=4.2
Q ss_pred CCcEEEEeCC
Q 032621 79 EDRLVVGCQS 88 (137)
Q Consensus 79 ~~~iv~~c~~ 88 (137)
+..|++.+..
T Consensus 37 G~~V~~~~r~ 46 (260)
T 3awd_A 37 GARVIIADLD 46 (260)
T ss_dssp TCEEEEEESC
T ss_pred CCEEEEEeCC
Confidence 3344444443
No 479
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=20.30 E-value=1.4e+02 Score=17.41 Aligned_cols=23 Identities=0% Similarity=-0.178 Sum_probs=10.2
Q ss_pred EEEEeCCCchHHHHHHHHHH-CCc
Q 032621 82 LVVGCQSGARSLHATADLLG-AGF 104 (137)
Q Consensus 82 iv~~c~~g~ra~~~~~~l~~-~G~ 104 (137)
|+++++...........|.. .||
T Consensus 7 ilivdd~~~~~~~l~~~L~~~~~~ 30 (140)
T 3lua_A 7 VLLIDYFEYEREKTKIIFDNIGEY 30 (140)
T ss_dssp EEEECSCHHHHHHHHHHHHHHCCC
T ss_pred EEEEeCCHHHHHHHHHHHHhccCc
Confidence 44444433344444444444 455
No 480
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=20.28 E-value=1.1e+02 Score=22.22 Aligned_cols=29 Identities=28% Similarity=0.311 Sum_probs=21.4
Q ss_pred cEEEEeCCCchHHHHHHHHHHCCccceeecc
Q 032621 81 RLVVGCQSGARSLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 81 ~iv~~c~~g~ra~~~~~~l~~~G~~~v~~l~ 111 (137)
.|+|+ ..|.-...+|..|.+.|++ |.+++
T Consensus 7 ~V~IV-GaG~aGl~~A~~L~~~G~~-v~v~E 35 (397)
T 2vou_A 7 RIAVV-GGSISGLTAALMLRDAGVD-VDVYE 35 (397)
T ss_dssp EEEEE-CCSHHHHHHHHHHHHTTCE-EEEEC
T ss_pred cEEEE-CCCHHHHHHHHHHHhCCCC-EEEEe
Confidence 44444 5677888888889999985 77665
No 481
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=20.26 E-value=1.6e+02 Score=18.63 Aligned_cols=35 Identities=23% Similarity=0.276 Sum_probs=25.3
Q ss_pred ccCCCcEEEEeCCCch--HHHHHHHHHHCCccceeecc
Q 032621 76 CKEEDRLVVGCQSGAR--SLHATADLLGAGFKHVSNFG 111 (137)
Q Consensus 76 ~~~~~~iv~~c~~g~r--a~~~~~~l~~~G~~~v~~l~ 111 (137)
+.+++.+|+++.+|.. ...++..+++.|.+ +..+.
T Consensus 77 ~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~-vi~IT 113 (186)
T 1m3s_A 77 LAEGDLVIIGSGSGETKSLIHTAAKAKSLHGI-VAALT 113 (186)
T ss_dssp CCTTCEEEEECSSSCCHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHHHCCCE-EEEEE
Confidence 5677778888888864 45567788889986 44443
No 482
>2eyq_A TRCF, transcription-repair coupling factor; MFD, SF2 ATPase, hydrolase; HET: EPE; 3.20A {Escherichia coli} SCOP: b.34.18.1 c.37.1.19 c.37.1.19 c.37.1.19 c.37.1.19 d.315.1.1
Probab=20.26 E-value=1.4e+02 Score=25.65 Aligned_cols=47 Identities=6% Similarity=-0.102 Sum_probs=35.3
Q ss_pred HHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHC--CccceeeccccHH
Q 032621 68 FLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGA--GFKHVSNFGGGHM 115 (137)
Q Consensus 68 ~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~--G~~~v~~l~GG~~ 115 (137)
....+...+.++..++++|++-..+...+..|.+. |+. +..+.|++.
T Consensus 801 i~~~il~~l~~g~qvlvf~~~v~~~~~l~~~L~~~~p~~~-v~~lhg~~~ 849 (1151)
T 2eyq_A 801 VREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEAR-IAIGHGQMR 849 (1151)
T ss_dssp HHHHHHHHHTTTCEEEEECCCSSCHHHHHHHHHHHCTTSC-EEECCSSCC
T ss_pred HHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHhCCCCe-EEEEeCCCC
Confidence 33444333567788999999888899999999886 664 888998753
No 483
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=20.24 E-value=1.3e+02 Score=16.99 Aligned_cols=14 Identities=7% Similarity=-0.080 Sum_probs=6.5
Q ss_pred HHHHHCCccceeecc
Q 032621 97 ADLLGAGFKHVSNFG 111 (137)
Q Consensus 97 ~~l~~~G~~~v~~l~ 111 (137)
..+....++ +.+++
T Consensus 41 ~~~~~~~~d-lvi~D 54 (123)
T 1xhf_A 41 QILSEYDIN-LVIMD 54 (123)
T ss_dssp HHHHHSCCS-EEEEC
T ss_pred HHHhcCCCC-EEEEc
Confidence 344444443 55544
No 484
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=20.15 E-value=1.9e+02 Score=18.87 Aligned_cols=44 Identities=11% Similarity=0.052 Sum_probs=31.3
Q ss_pred ChHHHHHHHhhccCCCcEEEEeCCCchHHHHHHHHHHCCcccee
Q 032621 65 NPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAGFKHVS 108 (137)
Q Consensus 65 ~~~~~~~~~~~~~~~~~iv~~c~~g~ra~~~~~~l~~~G~~~v~ 108 (137)
...+...+...+.++..+++.+............+.+.|+..+.
T Consensus 132 ~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~~ 175 (213)
T 2fca_A 132 YSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLTY 175 (213)
T ss_dssp SHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEEE
T ss_pred cHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcccc
Confidence 35677877777788888888876554556666777788886443
No 485
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=20.01 E-value=1.2e+02 Score=16.30 Aligned_cols=31 Identities=10% Similarity=-0.064 Sum_probs=0.0
Q ss_pred EEEeCCCchHHHHHHHHHHCCccceeecccc
Q 032621 83 VVGCQSGARSLHATADLLGAGFKHVSNFGGG 113 (137)
Q Consensus 83 v~~c~~g~ra~~~~~~l~~~G~~~v~~l~GG 113 (137)
++.+.....-..++..+.+.++..+.++++|
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~ 32 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGD 32 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEECC
Done!