Query 032623
Match_columns 137
No_of_seqs 139 out of 625
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 05:37:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032623.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032623hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1llaa3 b.1.18.3 (A:380-628) A 10.6 28 0.002 26.0 0.2 24 69-93 155-178 (249)
2 d1texa_ c.37.1.5 (A:) Stf0 sul 9.8 36 0.0026 21.2 0.4 17 6-22 11-27 (265)
3 d1wb9a1 a.113.1.1 (A:270-566) 7.5 94 0.0069 21.0 1.9 23 107-129 21-43 (297)
4 d1ztda1 a.149.1.2 (A:2-125) Hy 6.1 1.4E+02 0.011 20.4 2.3 18 3-20 3-20 (124)
5 d2dy1a5 d.58.11.1 (A:570-665) 5.3 1.3E+02 0.0092 18.3 1.5 10 122-131 87-96 (96)
6 d1hc1a3 b.1.18.3 (A:399-653) A 5.1 79 0.0058 23.4 0.4 23 69-92 162-184 (255)
7 d2qgsa1 a.211.1.1 (A:1-216) Un 4.9 1.6E+02 0.012 20.4 2.0 17 113-129 183-199 (216)
8 d3djba1 a.211.1.1 (A:2-214) Un 4.6 1.6E+02 0.012 20.5 1.8 16 113-128 181-196 (213)
9 d2pq7a1 a.211.1.1 (A:1-217) Pr 4.5 1.8E+02 0.013 20.0 2.0 15 114-128 188-202 (217)
10 d2pjqa1 a.211.1.1 (A:1-215) Un 4.2 2E+02 0.015 19.8 2.1 16 113-128 183-198 (215)
No 1
>d1llaa3 b.1.18.3 (A:380-628) Arthropod hemocyanin, C-terminal domain {Horseshoe crab (Limulus polyphemus) [TaxId: 6850]}
Probab=10.60 E-value=28 Score=26.00 Aligned_cols=24 Identities=33% Similarity=0.668 Sum_probs=19.2
Q ss_pred cCCCCCCcccccCCCCCCCcccccC
Q 032623 69 YPSGLPSLEFYLPNGNLSDEPMLLF 93 (137)
Q Consensus 69 ~p~glpsl~~~~p~~~~~~~~~~~~ 93 (137)
..||||. ++.+|.|..++.|+.++
T Consensus 155 ~~cG~P~-rLLLPkG~~~Gmpf~lf 178 (249)
T d1llaa3 155 CSCGWPS-HLLVPKGNIKGMEYHLF 178 (249)
T ss_dssp CCCSEEG-GGSSCCCBTTCEEEEEE
T ss_pred ccCCCCC-EEECcCCCCCCeeEEEE
Confidence 4699997 88999998888777653
No 2
>d1texa_ c.37.1.5 (A:) Stf0 sulfotransferase {Mycobacterium smegmatis [TaxId: 1772]}
Probab=9.78 E-value=36 Score=21.21 Aligned_cols=17 Identities=24% Similarity=0.329 Sum_probs=13.3
Q ss_pred HHHhhHHHHHHHHhcCC
Q 032623 6 LIRTGASLLNRLVSSKP 22 (137)
Q Consensus 6 L~RaGasLl~Rl~~~s~ 22 (137)
.-|+|+++|.+++...|
T Consensus 11 ~pRSGTT~L~~~L~~~p 27 (265)
T d1texa_ 11 SQRSGSTLLVESLRATG 27 (265)
T ss_dssp CTTSTHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHcCc
Confidence 35899999999976543
No 3
>d1wb9a1 a.113.1.1 (A:270-566) DNA repair protein MutS, domain III {Escherichia coli [TaxId: 562]}
Probab=7.48 E-value=94 Score=20.99 Aligned_cols=23 Identities=17% Similarity=0.216 Sum_probs=19.9
Q ss_pred hhhhhhhhcCChhhHHHHHHHHH
Q 032623 107 RNHGFFARKATKGGRRVIARRIA 129 (137)
Q Consensus 107 R~hGFraRm~T~~GRkVL~rRR~ 129 (137)
--.|++.+-.|+.|++.|++...
T Consensus 21 SL~~~ln~c~T~~GkRlLr~wLl 43 (297)
T d1wb9a1 21 TLASVLDCTVTPMGSRMLKRWLH 43 (297)
T ss_dssp SHHHHHCCCSSHHHHHHHHHHHH
T ss_pred cHHHHHcCCCCcHHHHHHHHHHh
Confidence 45799999999999999998754
No 4
>d1ztda1 a.149.1.2 (A:2-125) Hypothetical protein PF0609 {Pyrococcus furiosus [TaxId: 2261]}
Probab=6.15 E-value=1.4e+02 Score=20.41 Aligned_cols=18 Identities=44% Similarity=0.458 Sum_probs=15.6
Q ss_pred hhHHHHhhHHHHHHHHhc
Q 032623 3 TKTLIRTGASLLNRLVSS 20 (137)
Q Consensus 3 ~ktL~RaGasLl~Rl~~~ 20 (137)
-|.|++-|-||+|=+++.
T Consensus 3 dKgLak~GDSLiNfl~Sl 20 (124)
T d1ztda1 3 DKGLAKFGDSLINFLYSL 20 (124)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHhHHHHHHHHHH
Confidence 489999999999998754
No 5
>d2dy1a5 d.58.11.1 (A:570-665) Elongation factor G (EF-G) {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=5.30 E-value=1.3e+02 Score=18.29 Aligned_cols=10 Identities=30% Similarity=0.753 Sum_probs=7.9
Q ss_pred HHHHHHHHhC
Q 032623 122 RVIARRIAKG 131 (137)
Q Consensus 122 kVL~rRR~KG 131 (137)
+||+.|.+||
T Consensus 87 ~vi~~r~~kG 96 (96)
T d2dy1a5 87 RIVQERAQEG 96 (96)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHhcCC
Confidence 5888888887
No 6
>d1hc1a3 b.1.18.3 (A:399-653) Arthropod hemocyanin, C-terminal domain {Spiny lobster (Panulirus interruptus) [TaxId: 6735]}
Probab=5.11 E-value=79 Score=23.39 Aligned_cols=23 Identities=22% Similarity=0.434 Sum_probs=18.7
Q ss_pred cCCCCCCcccccCCCCCCCccccc
Q 032623 69 YPSGLPSLEFYLPNGNLSDEPMLL 92 (137)
Q Consensus 69 ~p~glpsl~~~~p~~~~~~~~~~~ 92 (137)
.-||||. ++.+|.|...+.++.+
T Consensus 162 ~~cG~P~-rLLLPkG~~~Gm~~~l 184 (255)
T d1hc1a3 162 RSCGIPD-RMLLPKSKPEGMEFNL 184 (255)
T ss_dssp SCCSEEG-GGSSCCCCSSCEEEEE
T ss_pred cCCCCCc-eeECcccCCCCEEEEE
Confidence 3599998 5999999888887754
No 7
>d2qgsa1 a.211.1.1 (A:1-216) Uncharacterized protein SE1688 {Staphylococcus epidermidis [TaxId: 1282]}
Probab=4.90 E-value=1.6e+02 Score=20.37 Aligned_cols=17 Identities=12% Similarity=0.114 Sum_probs=14.0
Q ss_pred hhcCChhhHHHHHHHHH
Q 032623 113 ARKATKGGRRVIARRIA 129 (137)
Q Consensus 113 aRm~T~~GRkVL~rRR~ 129 (137)
.+|.|..||++-..|..
T Consensus 183 ~~m~T~~gk~~A~~R~~ 199 (216)
T d2qgsa1 183 DLMHTPTAKKLAEERHQ 199 (216)
T ss_dssp GGCCSHHHHHHHHHHHH
T ss_pred hhcCCHHHHHHHHHHHH
Confidence 47999999999887753
No 8
>d3djba1 a.211.1.1 (A:2-214) Uncharacterized protein BT9727_1981 {Bacillus thuringiensis [TaxId: 1428]}
Probab=4.60 E-value=1.6e+02 Score=20.47 Aligned_cols=16 Identities=13% Similarity=0.046 Sum_probs=13.0
Q ss_pred hhcCChhhHHHHHHHH
Q 032623 113 ARKATKGGRRVIARRI 128 (137)
Q Consensus 113 aRm~T~~GRkVL~rRR 128 (137)
.+|.|+.||++=..|.
T Consensus 181 ~~m~T~~gr~~A~~R~ 196 (213)
T d3djba1 181 DLMNTNAAKQEAEVRH 196 (213)
T ss_dssp TSCCSHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHH
Confidence 3799999999877664
No 9
>d2pq7a1 a.211.1.1 (A:1-217) Predicted hydrolase mes0020 {Uncultured thermotogales bacterium [TaxId: 221214]}
Probab=4.51 E-value=1.8e+02 Score=19.99 Aligned_cols=15 Identities=20% Similarity=0.177 Sum_probs=11.7
Q ss_pred hcCChhhHHHHHHHH
Q 032623 114 RKATKGGRRVIARRI 128 (137)
Q Consensus 114 Rm~T~~GRkVL~rRR 128 (137)
+|.|..||++=..|.
T Consensus 188 ~m~T~~gk~lA~~R~ 202 (217)
T d2pq7a1 188 TFWTETARKMAEDRY 202 (217)
T ss_dssp TCSSHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHH
Confidence 799999999755553
No 10
>d2pjqa1 a.211.1.1 (A:1-215) Uncharacterized protein LP2664 {Lactobacillus plantarum [TaxId: 1590]}
Probab=4.24 E-value=2e+02 Score=19.79 Aligned_cols=16 Identities=25% Similarity=0.233 Sum_probs=13.4
Q ss_pred hhcCChhhHHHHHHHH
Q 032623 113 ARKATKGGRRVIARRI 128 (137)
Q Consensus 113 aRm~T~~GRkVL~rRR 128 (137)
.+|.|..||++=.+|.
T Consensus 183 ~~m~T~~gk~lA~~R~ 198 (215)
T d2pjqa1 183 ALMNTDTAKALAAHRT 198 (215)
T ss_dssp HHCCSHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHH
Confidence 6899999999877664
Done!