BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032628
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea
GN=PSBS PE=1 SV=1
Length = 274
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 62 PTFRVQAAKIPSGVDL-PRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFIVELILNKG 120
PT ++ A IP G D+ + K + P GFTK+ E++ R +G F+ I E+I KG
Sbjct: 168 PTTGLEKAVIPPGKDVRSALGLKTKGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKG 227
Query: 121 ILQVIGVEVG 130
L + +E G
Sbjct: 228 ALAQLNIETG 237
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 56 TASKRLPTFRVQAAKIPSGVDLPRVQPK----FQAPFLGFTKTAEIWNSRACMIGIVFTF 111
T K L F+ +A K P V+ P+++ + + +GFTK E++ R MIG +
Sbjct: 56 TVFKTLALFKSKA-KAPKKVEKPKLKVEDGLFGTSGGIGFTKENELFVGRVAMIGFAASL 114
Query: 112 IVELILNKGILQVIGVEVG 130
+ E I KGIL + +E G
Sbjct: 115 LGEGITGKGILSQLNLETG 133
>sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis
thaliana GN=PSBS PE=1 SV=1
Length = 265
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 62 PTFRVQAAKIPSGVDL-PRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFIVELILNKG 120
P ++ A IP G ++ + K Q P GFTK E++ R +GI F+ I E+I KG
Sbjct: 159 PPTGLEKAVIPPGKNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKG 218
Query: 121 ILQVIGVEVG 130
L + +E G
Sbjct: 219 ALAQLNIETG 228
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 89 LGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGVEVG 130
+GFTK E++ R MIG + + E + KGIL + +E G
Sbjct: 83 IGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETG 124
>sp|Q8YQR8|HEMH_NOSS1 Ferrochelatase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=hemH
PE=3 SV=1
Length = 388
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 54 IDTASKRLPTFRV-QAAKIPSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFI 112
ID +K P+F++ QAA+I V ++ P ++ G T +AE+WN R M+G + I
Sbjct: 319 IDALNK--PSFKLSQAAQIKKMV---KMYPP-ESWEWGMTSSAEVWNGRIAMLGFI-ALI 371
Query: 113 VELILNKGILQVIGV 127
+EL+ +G+L +IG+
Sbjct: 372 IELVTGQGLLHMIGL 386
>sp|P51355|YCF17_PORPU Uncharacterized protein ycf17 OS=Porphyra purpurea GN=ycf17 PE=3
SV=1
Length = 48
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 88 FLGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
F GFT +AE WN R MIG + +EL+ KG+L + G+
Sbjct: 7 FWGFTDSAETWNGRFAMIGFMAVIFIELVTGKGLLYLSGL 46
>sp|Q3MCT9|HEMH_ANAVT Ferrochelatase OS=Anabaena variabilis (strain ATCC 29413 / PCC
7937) GN=hemH PE=3 SV=1
Length = 388
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 8/75 (10%)
Query: 54 IDTASKRLPTFRV-QAAKIPSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFI 112
ID +K P+F++ QAA+I V ++ P ++ G T +AE+WN R M+G + I
Sbjct: 319 IDALNK--PSFKLSQAAQIKKMV---KMYPP-ESWEWGMTSSAEVWNGRIAMLGFI-ALI 371
Query: 113 VELILNKGILQVIGV 127
+EL+ +G+L +IG+
Sbjct: 372 IELVTGQGLLHMIGL 386
>sp|B2J9P0|HEMH_NOSP7 Ferrochelatase OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=hemH PE=3 SV=1
Length = 388
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 46 LFNNHSSKIDTASKRLPTFRV-QAAKIPSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACM 104
+F N +++ + + P+F++ QAA++ V + Q +++ G T +AE+WN R M
Sbjct: 309 VFINALAELVIDALKNPSFKLSQAAQMKKMVKM-YPQERWE---WGLTTSAEVWNGRIAM 364
Query: 105 IGIVFTFIVELILNKGILQVIGV 127
+G + I+ELI G L +IG+
Sbjct: 365 LGFI-ALIIELITGHGFLHMIGL 386
>sp|Q1XDD2|YCF17_PORYE Uncharacterized protein ycf17 OS=Porphyra yezoensis GN=ycf17 PE=3
SV=1
Length = 48
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 90 GFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
GFT +AE WN R MIG + +E++ +G+L +IG+
Sbjct: 9 GFTDSAETWNGRFAMIGFISVIFIEVVTGQGLLYLIGM 46
>sp|Q46GQ1|HEMH_PROMT Ferrochelatase OS=Prochlorococcus marinus (strain NATL2A) GN=hemH
PE=3 SV=1
Length = 391
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 67 QAAKIPSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIG 126
+A+K+P V L Q K+Q G+ ++E+WN R MI + +F++ELI+ G L IG
Sbjct: 335 EASKLPERVKL-YPQEKWQ---WGWNNSSEVWNGRVAMI-VFLSFLMELIIGGGPLHQIG 389
Query: 127 V 127
+
Sbjct: 390 L 390
>sp|Q0I8L9|HEMH_SYNS3 Ferrochelatase OS=Synechococcus sp. (strain CC9311) GN=hemH PE=3
SV=1
Length = 391
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 67 QAAKIPSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIG 126
QAA++P+ V L Q K++ G+ ++E+WN R MIG F++ELI G L +G
Sbjct: 335 QAAELPTTVKL-YPQEKWE---WGWNNSSEVWNGRLAMIGFS-AFLLELISGHGPLHAVG 389
Query: 127 V 127
+
Sbjct: 390 L 390
>sp|A2C0Y4|HEMH_PROM1 Ferrochelatase OS=Prochlorococcus marinus (strain NATL1A) GN=hemH
PE=3 SV=1
Length = 391
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 67 QAAKIPSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIG 126
+A+K+P V L Q K+Q G+ ++E+WN R MI + F++ELI+ G L IG
Sbjct: 335 EASKLPERVKL-YPQEKWQ---WGWNNSSEVWNGRVAMI-VFLCFLMELIIGGGPLHQIG 389
Query: 127 V 127
+
Sbjct: 390 L 390
>sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplastic OS=Solanum
sogarandinum GN=PSBS PE=2 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 86 APFLGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGVEVG 130
P GFTK E++ R +GI F+ I E+I KG L + E G
Sbjct: 196 GPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETG 240
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 89 LGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGVEVG 130
+GFTK E++ R MIG + + E I KGIL + +E G
Sbjct: 93 IGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETG 134
>sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplastic OS=Solanum
lycopersicum GN=PSBS PE=3 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 86 APFLGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGVEVG 130
P GFTK E++ R +GI F+ I E+I KG L + E G
Sbjct: 196 GPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETG 240
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 89 LGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGVEVG 130
+GFTK E++ R MIG + + E I KGIL + +E G
Sbjct: 93 IGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETG 134
>sp|Q7VD58|HEMH_PROMA Ferrochelatase OS=Prochlorococcus marinus (strain SARG / CCMP1375 /
SS120) GN=hemH PE=3 SV=1
Length = 391
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 67 QAAKIPSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIG 126
+AAK+P V L Q K+Q G+ +AE+WN R M + F EL++ G L IG
Sbjct: 335 EAAKLPEKVKL-YPQEKWQ---WGWNNSAEVWNGRVAMFVFIICFF-ELVIGNGPLHYIG 389
Query: 127 V 127
+
Sbjct: 390 L 390
>sp|B0JRN7|HEMH_MICAN Ferrochelatase OS=Microcystis aeruginosa (strain NIES-843) GN=hemH
PE=3 SV=1
Length = 387
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 90 GFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
G T AE+WN R MIG + I+ELI +G L +G+
Sbjct: 350 GMTTAAEVWNGRLAMIGFL-AIIIELITGQGPLHFVGL 386
>sp|P54225|HEMH_SYNY3 Ferrochelatase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=hemH PE=3 SV=1
Length = 387
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 90 GFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
G T AE+WN R M+G + +VELI +G L +G+
Sbjct: 350 GLTTAAEVWNGRLAMLGFI-ALLVELISGQGPLHFVGL 386
>sp|Q3ALP2|HEMH_SYNSC Ferrochelatase OS=Synechococcus sp. (strain CC9605) GN=hemH PE=3
SV=1
Length = 391
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 68 AAKIPSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
AA++P+ V L Q K++ G+ ++E+WN R M+G F++ELI +G L +G+
Sbjct: 336 AAELPNKVKL-YPQEKWE---WGWNNSSEVWNGRLAMVGFS-AFLLELISGQGPLHALGL 390
>sp|Q7U5G0|HEMH_SYNPX Ferrochelatase OS=Synechococcus sp. (strain WH8102) GN=hemH PE=3
SV=1
Length = 391
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 68 AAKIPSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
AA++P+ V L Q K++ G+ ++E+WN R M+G F++ELI G L +G+
Sbjct: 336 AAELPTKVKL-YPQEKWE---WGWNNSSEVWNGRLAMLGFS-AFLLELISGHGPLHALGL 390
>sp|B7KGB9|HEMH_CYAP7 Ferrochelatase OS=Cyanothece sp. (strain PCC 7424) GN=hemH PE=3
SV=1
Length = 387
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 90 GFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
G T AE+WN R MIG + ++ELI G L +G+
Sbjct: 350 GMTTAAEVWNGRLAMIGFI-ALLIELISGHGPLHFVGL 386
>sp|Q31C09|HEMH_PROM9 Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9312) GN=hemH
PE=3 SV=1
Length = 391
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 67 QAAKIPSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIG 126
+A+K+P V L Q K+Q G+ ++E+WN R MI + FI ELI G L +G
Sbjct: 335 EASKLPEKVKL-YPQEKWQ---WGWNNSSEVWNGRVAMIVFLVLFI-ELIAGSGPLHRLG 389
Query: 127 V 127
+
Sbjct: 390 I 390
>sp|B7K399|HEMH_CYAP8 Ferrochelatase OS=Cyanothece sp. (strain PCC 8801) GN=hemH PE=3
SV=1
Length = 387
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 90 GFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
G T AE+WN R M+G + ++ELI G L +G+
Sbjct: 350 GLTTAAEVWNGRLAMVGFI-ALLIELISGHGPLHFVGL 386
>sp|A2BQ06|HEMH_PROMS Ferrochelatase OS=Prochlorococcus marinus (strain AS9601) GN=hemH
PE=3 SV=1
Length = 391
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 67 QAAKIPSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIG 126
+A+K+P V L Q K+Q G+ ++E+WN R MI I +ELI G L +G
Sbjct: 335 EASKLPEKVKL-YPQEKWQ---WGWNNSSEVWNGRVAMI-IFLVLFIELISGSGPLHKLG 389
Query: 127 V 127
+
Sbjct: 390 I 390
>sp|Q7V2F5|HEMH_PROMP Ferrochelatase OS=Prochlorococcus marinus subsp. pastoris (strain
CCMP1986 / MED4) GN=hemH PE=3 SV=1
Length = 391
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 42 QQLSLFNNHSSKIDTASKRL------PTFRVQ-AAKIPSGVDLPRVQPKFQAPFLGFTKT 94
+++ N H + ID S+ + P ++ A+++P V L Q K+Q G+ +
Sbjct: 303 RRVKALNTHPTFIDGLSELVVSCLEGPIINIEKASELPEKVKL-YPQEKWQ---WGWNNS 358
Query: 95 AEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
+E+WN R MI + FI ELI G L +G+
Sbjct: 359 SEVWNGRVAMIVFLILFI-ELISGSGPLHKLGI 390
>sp|A5GJF5|HEMH_SYNPW Ferrochelatase OS=Synechococcus sp. (strain WH7803) GN=hemH PE=3
SV=1
Length = 391
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 68 AAKIPSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
AA++P+ V L Q K++ G+ ++E+WN R M+G F++ELI G L +G+
Sbjct: 336 AAELPTKVKL-YPQEKWE---WGWNNSSEVWNGRLAMLGFS-GFLLELISGHGPLHALGL 390
>sp|A9BEE9|HEMH_PROM4 Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9211) GN=hemH
PE=3 SV=1
Length = 391
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 67 QAAKIPSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFIV---ELILNKGILQ 123
+A+K+P V L Q K+Q G+ +AE+WN R M F FI+ EL++ G L
Sbjct: 335 EASKLPDRVKL-YPQEKWQ---WGWNNSAEVWNGRVAM----FVFIICLLELVIGNGPLH 386
Query: 124 VIGV 127
+G+
Sbjct: 387 YLGL 390
>sp|A5GS98|HEMH_SYNR3 Ferrochelatase OS=Synechococcus sp. (strain RCC307) GN=hemH PE=3
SV=1
Length = 387
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 90 GFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
G+ ++E+WN R M+G F+VELI G L +G+
Sbjct: 350 GWNNSSEVWNGRLAMLGFS-AFLVELISGHGPLHALGL 386
>sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum
GN=PSBS PE=2 SV=1
Length = 274
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 89 LGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGVEVG 130
+GFTK E++ R MIG + + E I KGIL + +E G
Sbjct: 91 IGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETG 132
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 86 APFLGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGVEVG 130
P FTK E++ R +GI F+ I E+I KG L + E G
Sbjct: 194 GPLFEFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETG 238
>sp|Q5N2B2|HEMH_SYNP6 Ferrochelatase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
SAUG 1402/1) GN=hemH PE=3 SV=1
Length = 387
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 46 LFNNHSSKIDTASKRLPTFRVQAAKI-PSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACM 104
LF S + + P FR++ + P V L Q +++ G T AE+WN R M
Sbjct: 309 LFIQDLSDLVEQTLEQPRFRLEDVTLLPKKVKL-YPQERWE---WGITLNAEVWNGRIAM 364
Query: 105 IGIVFTFIVELILNKGILQVIGV 127
+G + +VEL+ +G L +G+
Sbjct: 365 LGFL-ALLVELLTGRGPLHALGL 386
>sp|Q31S00|HEMH_SYNE7 Ferrochelatase OS=Synechococcus elongatus (strain PCC 7942) GN=hemH
PE=3 SV=1
Length = 387
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 46 LFNNHSSKIDTASKRLPTFRVQAAKI-PSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACM 104
LF S + + P FR++ + P V L Q +++ G T AE+WN R M
Sbjct: 309 LFIQDLSDLVEQTLEQPRFRLEDVTLLPKKVKL-YPQERWE---WGITLNAEVWNGRIAM 364
Query: 105 IGIVFTFIVELILNKGILQVIGV 127
+G + +VEL+ +G L +G+
Sbjct: 365 LGFL-ALLVELLTGRGPLHALGL 386
>sp|Q10WR6|HEMH_TRIEI Ferrochelatase OS=Trichodesmium erythraeum (strain IMS101) GN=hemH
PE=3 SV=1
Length = 387
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 90 GFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
G T TAE+WN R M+G + ++ELI G L G+
Sbjct: 350 GLTTTAEVWNGRLAMVGFM-ALLLELITGYGPLHFAGL 386
>sp|P48367|YCF17_CYAPA Uncharacterized protein ycf17 OS=Cyanophora paradoxa GN=ycf17 PE=3
SV=1
Length = 49
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 90 GFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
GFT AE WN R M+G + + E + +G L +G+
Sbjct: 11 GFTSGAENWNGRLAMLGFIAALLTESLTGQGTLHFLGI 48
>sp|A8G3P0|HEMH_PROM2 Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9215) GN=hemH
PE=3 SV=1
Length = 391
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 67 QAAKIPSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIG 126
+A+++P V L Q K+Q G+ ++E+WN R MI I +ELI G L +G
Sbjct: 335 EASQLPEKVKL-YPQEKWQ---WGWNNSSEVWNGRVAMI-IFLVLFIELISGSGPLHKLG 389
Query: 127 V 127
+
Sbjct: 390 I 390
>sp|A3PBP9|HEMH_PROM0 Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9301) GN=hemH
PE=3 SV=1
Length = 391
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 67 QAAKIPSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIG 126
+A+++P V L Q K+Q G+ ++E+WN R MI I +ELI G L +G
Sbjct: 335 EASQLPEKVKL-YPQEKWQ---WGWNNSSEVWNGRVAMI-IFLVLFIELISGSGPLHKLG 389
Query: 127 V 127
+
Sbjct: 390 I 390
>sp|A2BVI7|HEMH_PROM5 Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9515) GN=hemH
PE=3 SV=1
Length = 391
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 67 QAAKIPSGVDLPRVQPKFQAPFLGFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIG 126
+A+++P V L Q K+Q G+ ++E+WN R MI + FI ELI G L +G
Sbjct: 335 KASELPEKVKL-YPQEKWQ---WGWNNSSEVWNGRVAMIVFLILFI-ELISGSGPLHKLG 389
Query: 127 V 127
+
Sbjct: 390 I 390
>sp|Q7V6C6|HEMH_PROMM Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9313) GN=hemH
PE=3 SV=1
Length = 391
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 90 GFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
G ++E WN R M+G F++ELI G L IG+
Sbjct: 354 GLNTSSEAWNGRIAMLGFA-AFLLELISGHGPLHAIGL 390
>sp|A2C7Q7|HEMH_PROM3 Ferrochelatase OS=Prochlorococcus marinus (strain MIT 9303) GN=hemH
PE=3 SV=1
Length = 391
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 90 GFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
G ++E WN R M+G F++ELI G L IG+
Sbjct: 354 GLNTSSEAWNGRIAMLGFA-AFLLELISGHGPLHAIGL 390
>sp|Q8DGU6|HEMH_THEEB Ferrochelatase OS=Thermosynechococcus elongatus (strain BP-1)
GN=hemH PE=3 SV=2
Length = 388
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 90 GFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
G T AE WN R M+G + ++ELI +G L ++G+
Sbjct: 351 GMTSAAERWNGRLAMLGFL-ALMIELISGQGPLHMLGL 387
>sp|O78425|YCF17_GUITH Uncharacterized protein ycf17 OS=Guillardia theta GN=ycf17 PE=3
SV=1
Length = 53
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 90 GFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVI 125
GF AE WN R MI + VE I NK +L ++
Sbjct: 15 GFNVYAENWNGRLAMISFLLIICVEFITNKNVLDLV 50
>sp|P0CM40|ATG9_CRYNJ Autophagy-related protein 9 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ATG9 PE=3 SV=1
Length = 879
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 13/62 (20%)
Query: 60 RLPTFRVQAAKIPSGV-------DLPRVQPKFQAPFLGF-----TKTAEIWNSRACMIGI 107
R+P V A IPS + LP +Q + + FL F TK E WN R C++G
Sbjct: 298 RIPVPHVLTAFIPSSILISSADAPLPSLQSEPERKFLSFGANHLTKALE-WNLRFCLLGY 356
Query: 108 VF 109
+F
Sbjct: 357 LF 358
>sp|P0CM41|ATG9_CRYNB Autophagy-related protein 9 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=ATG9 PE=3 SV=1
Length = 879
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 13/62 (20%)
Query: 60 RLPTFRVQAAKIPSGV-------DLPRVQPKFQAPFLGF-----TKTAEIWNSRACMIGI 107
R+P V A IPS + LP +Q + + FL F TK E WN R C++G
Sbjct: 298 RIPVPHVLTAFIPSSILISSADAPLPSLQSEPERKFLSFGANHLTKALE-WNLRFCLLGY 356
Query: 108 VF 109
+F
Sbjct: 357 LF 358
>sp|Q1H288|MLTF_METFK Membrane-bound lytic murein transglycosylase F OS=Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=mltF
PE=3 SV=1
Length = 472
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 10 LLKAKTKAAMASSSLISSSLLPTKFLTIHRQSQQLSLFNNHSSKIDTASKRLPTFRVQAA 69
LLK K A A S+ + +F +++ QQ +FNN +K A K + +
Sbjct: 87 LLKHKAHFAAADLSITRTREHLVRFTRPYQKVQQQIVFNNELTK---APKNIKELLNRQI 143
Query: 70 KIPSGVDLP-RVQP-KFQAPFLGFTKT 94
+PSG R+Q K Q P L +T+T
Sbjct: 144 AVPSGTSYSERLQRLKEQEPLLSWTET 170
>sp|B1XL79|HEMH_SYNP2 Ferrochelatase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 /
PR-6) GN=hemH PE=3 SV=1
Length = 386
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 90 GFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
G +AE+ N R MIG + ++ELI +G L +G+
Sbjct: 349 GMNTSAEVLNGRLAMIGFL-ALLLELISGQGPLHFVGI 385
>sp|C5BN92|PDXH_TERTT Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Teredinibacter
turnerae (strain ATCC 39867 / T7901) GN=pdxH PE=3 SV=1
Length = 211
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 25 ISSSLLPTKFLTIHRQSQQLSLFNNHSSKIDTASKRLPTFRVQAAKIPSGVDLPRVQPKF 84
IS++ FLT R+SQ + + S +ID+ L F AK G ++P P F
Sbjct: 114 ISTAETLKYFLTRPRESQLAAWASEQSQRIDSRKALLSQFEAMKAKFTKG-EIPL--PDF 170
Query: 85 QAPFLGFTKTAEIWNSRACMIGIVFTFIVE 114
++ + E W A + F + E
Sbjct: 171 WGGYVVKPQAIEFWQGGASRLHDRFLYCNE 200
>sp|Q10337|BRC1_SCHPO BRCT-containing protein 1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=brc1 PE=1 SV=1
Length = 878
Score = 28.9 bits (63), Expect = 8.6, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 4 PMNEAQLLKAKTKAAMASSSLISSSLLPTKFLTIHRQSQQLSLFNNHSS 52
P+N +QLL++K K+A + S++ + ++P L R+ ++ + SS
Sbjct: 599 PLNSSQLLRSKRKSAATALSMLQNVIMP-DVLAFEREKKRRQTHRSVSS 646
>sp|A3PED3|MURA_PROM0 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
OS=Prochlorococcus marinus (strain MIT 9301) GN=murA
PE=3 SV=1
Length = 456
Score = 28.9 bits (63), Expect = 8.8, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 23/132 (17%)
Query: 17 AAMASSSLISSSLLPTKFLTIHRQSQQLSLFNNHSSKIDTASKRLPTFRVQAAKIPSGVD 76
AA SSS+ S ++P + + Q+ SKI + + KI GVD
Sbjct: 258 AAATSSSITISPVIPNHLEAVTNKLQE------SGSKITIKGN---SITINCNKI-KGVD 307
Query: 77 L-----PRVQPKFQAPFL-------GFTKTAE-IWNSRACMIGIVFTFIVELILNKGILQ 123
+ P QAPF G +K E I+ +R + ++ + LNK I
Sbjct: 308 IETAPFPGFPTDLQAPFTTLMAIANGESKITETIFENRMNHVHLLNKMGANIKLNKNIAH 367
Query: 124 VIGVEVGKGLDL 135
+ GV+ KG+DL
Sbjct: 368 IKGVKKFKGMDL 379
>sp|O04921|HEMH2_ARATH Ferrochelatase-2, chloroplastic OS=Arabidopsis thaliana
GN=At2g30390 PE=2 SV=1
Length = 512
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 90 GFTKTAEIWNSRACMIGIVFTFIVELILNKGILQVIGV 127
G+TK+AE WN RA M+ ++ ++E+ KG L G+
Sbjct: 471 GWTKSAETWNGRAAMLAVLALLVLEVTTGKGFLHQWGI 508
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,255,845
Number of Sequences: 539616
Number of extensions: 1511604
Number of successful extensions: 3154
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 3130
Number of HSP's gapped (non-prelim): 61
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)