BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032633
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27202|PSBR_ARATH Photosystem II 10 kDa polypeptide, chloroplastic OS=Arabidopsis
thaliana GN=PSBR PE=1 SV=1
Length = 140
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/140 (81%), Positives = 126/140 (90%), Gaps = 3/140 (2%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAASVM SS++LKPA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 117
LR+G+DASGRK KG GVY++VDKYGANVDGYSPIYNEN+WS SGDVY GG TGLAIWAVT
Sbjct: 61 LRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVT 120
Query: 118 LAGLLAGGALLVYNTSALAQ 137
LAG+LAGGALLVYNTSALAQ
Sbjct: 121 LAGILAGGALLVYNTSALAQ 140
>sp|P49108|PSBR_BRACM Photosystem II 10 kDa polypeptide, chloroplastic OS=Brassica
campestris GN=PSBR PE=2 SV=1
Length = 141
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/141 (79%), Positives = 125/141 (88%), Gaps = 4/141 (2%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGM 56
MAASVM SS++LKPA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG M
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAV 116
DLR+G+DASGRK KG GVY+FVDKYGANVDGYSPIYNE++WS SGDVY GG TGLAIWAV
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 120
Query: 117 TLAGLLAGGALLVYNTSALAQ 137
TLAG+LAGGALLVYNTSALAQ
Sbjct: 121 TLAGILAGGALLVYNTSALAQ 141
>sp|Q40519|PSBR_TOBAC Photosystem II 10 kDa polypeptide, chloroplastic OS=Nicotiana
tabacum GN=PSBR PE=2 SV=1
Length = 136
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 122/140 (87%), Gaps = 7/140 (5%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SLKPAPF+VEK+A +GLPSLA++S F++ A G K+KTDKPYG+NG M
Sbjct: 1 MASTVM----SLKPAPFSVEKTAVKGLPSLARSSSSFRVQASGVKKLKTDKPYGINGSMS 56
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 117
LR+G+DASGRK KGKGVYQFVDKYGANVDGYSPIYN +DWSPSGDVY GG TGLAIWAVT
Sbjct: 57 LRDGVDASGRKQKGKGVYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGTTGLAIWAVT 116
Query: 118 LAGLLAGGALLVYNTSALAQ 137
L G+LAGGALLV+NTSALAQ
Sbjct: 117 LVGILAGGALLVFNTSALAQ 136
>sp|P06183|PSBR_SOLTU Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum
tuberosum GN=PSBR PE=2 SV=1
Length = 138
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/140 (76%), Positives = 124/140 (88%), Gaps = 5/140 (3%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK++ +GLPSLA++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKTSVKGLPSLARSSSSFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 117
LR+G+DASGRK KGKGVYQ+VDKYGANVDGYSPIYN ++WSPSGDVY GG TGLAIWAVT
Sbjct: 59 LRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVT 118
Query: 118 LAGLLAGGALLVYNTSALAQ 137
L G+LAGGALLVYNTSALAQ
Sbjct: 119 LVGILAGGALLVYNTSALAQ 138
>sp|Q40163|PSBR_SOLLC Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum
lycopersicum GN=PSBR PE=2 SV=1
Length = 138
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/140 (75%), Positives = 122/140 (87%), Gaps = 5/140 (3%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK + +GLPSL ++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKISVKGLPSLTRSSSSFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 117
LR+G+DASGRK KGKGVYQ+VDKYGANVDGYSPIYN ++WSPSGDVY GG TGLAIWAVT
Sbjct: 59 LRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVT 118
Query: 118 LAGLLAGGALLVYNTSALAQ 137
L G+LAGGALLVYNTSALAQ
Sbjct: 119 LLGILAGGALLVYNTSALAQ 138
>sp|P10690|PSBR_SPIOL Photosystem II 10 kDa polypeptide, chloroplastic OS=Spinacia
oleracea GN=PSBR PE=2 SV=1
Length = 140
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/141 (73%), Positives = 118/141 (83%), Gaps = 5/141 (3%)
Query: 1 MAASVMASSLSLKPAPFTVE-KSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGM 56
MA SVM SSLSLKP+ F V+ KSA +GLPSL+++S F + A G KIK DKP G+ GGM
Sbjct: 1 MATSVM-SSLSLKPSSFGVDTKSAVKGLPSLSRSSASFTVRASGVKKIKVDKPLGIGGGM 59
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAV 116
LR+G+D+SGRK GKGVYQFVDKYGANVDGYSPIYNE +W+P+GDVY GG TGL IWAV
Sbjct: 60 KLRDGVDSSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDVYAGGTTGLLIWAV 119
Query: 117 TLAGLLAGGALLVYNTSALAQ 137
TLAGLLAGGALLVYNTSALAQ
Sbjct: 120 TLAGLLAGGALLVYNTSALAQ 140
>sp|Q40070|PSBR_HORVU Photosystem II 10 kDa polypeptide, chloroplastic OS=Hordeum vulgare
GN=PSBR PE=3 SV=1
Length = 138
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/139 (64%), Positives = 107/139 (76%), Gaps = 5/139 (3%)
Query: 1 MAASVMASSLSLKPA--PFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMD 57
M+A VMAS L+LKP+ P +++S G+ A+ S IVAK K ++T +PYG GG+
Sbjct: 1 MSACVMAS-LALKPSSSPL-LQRSKLGGVRPSARPSLVIVAKKAKKVQTAQPYGPGGGVA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVT 117
+EG+DASGR AKGKGVYQF DKYGANVDGYSPIY +WSPSGDVY GG TGL +WAVT
Sbjct: 59 FKEGVDASGRVAKGKGVYQFADKYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAVT 118
Query: 118 LAGLLAGGALLVYNTSALA 136
LAG+L GGALLVY+TSALA
Sbjct: 119 LAGILLGGALLVYSTSALA 137
>sp|Q8RWJ6|SCP1_ARATH Serine carboxypeptidase-like 1 OS=Arabidopsis thaliana GN=SCPL1
PE=2 SV=1
Length = 441
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P T++ G LPSL T++ I D+P G + +
Sbjct: 92 SGLLFENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSIIFLDQPVGTGFSYSRTQQFNKPS 151
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+ K +++F+ K+ G +++ N + +GD Y+G
Sbjct: 152 DSGEAKRIHEFLQKW----LGKHQVFSSNPFYVAGDSYSG 187
>sp|Q9CAU3|SCP2_ARATH Serine carboxypeptidase-like 2 OS=Arabidopsis thaliana GN=SCPL2
PE=2 SV=1
Length = 441
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P T++ G LPSL T++ I D+P G + +
Sbjct: 92 SGLLFENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSMIFLDQPVGTGFSYSRTQQFNKPS 151
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+ K +++F+ K+ G ++ N + +GD Y+G
Sbjct: 152 DSGEAKRIHEFLQKW----LGKHQEFSSNPFYVAGDSYSG 187
>sp|O81009|SCP12_ARATH Serine carboxypeptidase-like 12 OS=Arabidopsis thaliana GN=SCPL12
PE=2 SV=1
Length = 435
Score = 33.1 bits (74), Expect = 0.47, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
+ L + P ++ G +PSL T++ I D+P G +D
Sbjct: 84 TGLLFENGPLALKSKVYNGSVPSLVSTTYSWTKTANIIFLDQPIGAGFSYSRIPLIDTPS 143
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+ K +++F+ K+ + P ++ N + SGD Y+G
Sbjct: 144 DTGEVKNIHEFLQKWLSK----HPQFSSNPFYASGDSYSG 179
>sp|Q9CAU0|SCP6_ARATH Serine carboxypeptidase-like 6 OS=Arabidopsis thaliana GN=SCPL6
PE=2 SV=2
Length = 452
Score = 32.3 bits (72), Expect = 0.86, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P T++ G LPSL T++ I D+P G E +
Sbjct: 92 SGLLYENGPLTMKLDVYNGTLPSLVSTTYSWTKNSSMIFLDQPVGTGFSYSRTELFNKPS 151
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+ K +++F+ K+ G ++ N + GD Y+G
Sbjct: 152 DTGEAKRIHEFLQKW----LGKHQEFSSNPFYVGGDSYSG 187
>sp|A1AV52|SYL_RUTMC Leucine--tRNA ligase OS=Ruthia magnifica subsp. Calyptogena
magnifica GN=leuS PE=3 SV=1
Length = 816
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 36 KIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN-----VDGY 88
K++ G IK D+P+ + GM L++G S K Q ++KYGA+ +
Sbjct: 545 KLLRDEGFIKNDEPFKNLLTQGMVLKDGAKMSKSKGNTVDPAQMIEKYGADTVRLFILFA 604
Query: 89 SPIYNENDWSPSG 101
+P +WS SG
Sbjct: 605 APPTQNLEWSDSG 617
>sp|Q9CAU1|SCP3_ARATH Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3
PE=2 SV=1
Length = 441
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P ++ G LPSL T++ I D+P G + L+
Sbjct: 92 SGLLFENGPLAMKLDVYNGTLPSLVSTTYSWTKASSMIFLDQPVGAGFSYSRTQLLNKPS 151
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+ K +++F+ K+ G ++ N + GD Y+G
Sbjct: 152 DSGEAKRIHEFLQKW----LGKHQEFSSNPFYVGGDSYSG 187
>sp|Q03KT7|PYRK_STRTD Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit
OS=Streptococcus thermophilus (strain ATCC BAA-491 /
LMD-9) GN=pyrK PE=3 SV=1
Length = 257
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 26 GLPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANV 85
G+P L +T+ ++ AKG ++ + + + L + L A G VY D +
Sbjct: 117 GVPPLVETAKQLKAKGVEVVSVIGFANKNAVILEDKLRACG------DVYVTTDDGSYGI 170
Query: 86 DGY-SPIYNENDWSPSGDVYTGGATGL 111
GY S + + DW+P VY+ GA G+
Sbjct: 171 KGYVSTVIDNFDWTPDA-VYSCGAPGM 196
>sp|A4IXU1|SYL_FRATW Leucine--tRNA ligase OS=Francisella tularensis subsp. tularensis
(strain WY96-3418) GN=leuS PE=3 SV=1
Length = 813
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN-VDG 87
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+ V
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGADTVRL 600
Query: 88 YS----PIYNENDWSPSG 101
+S P +WS +G
Sbjct: 601 FSMFAAPPEQSLEWSETG 618
>sp|Q5NG64|SYL_FRATT Leucine--tRNA ligase OS=Francisella tularensis subsp. tularensis
(strain SCHU S4 / Schu 4) GN=leuS PE=3 SV=1
Length = 813
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN-VDG 87
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+ V
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGADTVRL 600
Query: 88 YS----PIYNENDWSPSG 101
+S P +WS +G
Sbjct: 601 FSMFAAPPEQSLEWSETG 618
>sp|B2SGM9|SYL_FRATM Leucine--tRNA ligase OS=Francisella tularensis subsp. mediasiatica
(strain FSC147) GN=leuS PE=3 SV=1
Length = 813
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN-VDG 87
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+ V
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGADTVRL 600
Query: 88 YS----PIYNENDWSPSG 101
+S P +WS +G
Sbjct: 601 FSMFAAPPEQSLEWSETG 618
>sp|Q14HL6|SYL_FRAT1 Leucine--tRNA ligase OS=Francisella tularensis subsp. tularensis
(strain FSC 198) GN=leuS PE=3 SV=1
Length = 813
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN-VDG 87
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+ V
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGADTVRL 600
Query: 88 YS----PIYNENDWSPSG 101
+S P +WS +G
Sbjct: 601 FSMFAAPPEQSLEWSETG 618
>sp|A0Q693|SYL_FRATN Leucine--tRNA ligase OS=Francisella tularensis subsp. novicida
(strain U112) GN=leuS PE=3 SV=1
Length = 813
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN-VDG 87
A+ K++ G +K+D+P+ + GM L++G S K + +D+YGA+ V
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNTVDPQELIDRYGADTVRL 600
Query: 88 YS----PIYNENDWSPSG 101
+S P +WS +G
Sbjct: 601 FSMFAAPPEQSLEWSETG 618
>sp|Q2V465|SCP11_ARATH Serine carboxypeptidase-like 11 OS=Arabidopsis thaliana GN=SCPL11
PE=2 SV=2
Length = 433
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
+ L + P ++ G +PSL T++ I D+P G +D
Sbjct: 84 TGLLFQNGPLALKSEVYNGSVPSLVSTTYSWTKTANIIFLDQPVGAGFSYSRAPLIDTPT 143
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+ K +++F+ K+ + P ++ N + GD Y+G
Sbjct: 144 DTGEVKRIHEFLQKWLSK----HPQFSSNHFYAGGDSYSG 179
>sp|Q0BLI7|SYL_FRATO Leucine--tRNA ligase OS=Francisella tularensis subsp. holarctica
(strain OSU18) GN=leuS PE=3 SV=1
Length = 813
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN 84
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGAD 596
>sp|Q2A307|SYL_FRATH Leucine--tRNA ligase OS=Francisella tularensis subsp. holarctica
(strain LVS) GN=leuS PE=3 SV=1
Length = 813
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN 84
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGAD 596
>sp|A7NCQ3|SYL_FRATF Leucine--tRNA ligase OS=Francisella tularensis subsp. holarctica
(strain FTNF002-00 / FTA) GN=leuS PE=3 SV=1
Length = 813
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN 84
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGAD 596
>sp|Q9CAU2|SCP5_ARATH Serine carboxypeptidase-like 5 OS=Arabidopsis thaliana GN=SCPL5
PE=2 SV=2
Length = 438
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P ++ G LPSL T++ I D+P G + +
Sbjct: 91 SGLLFENGPLAMKLDVYNGTLPSLVPTTYSWTKTSSMIFLDQPVGTGFSYSRTQQYNKPS 150
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+ K +++F+ K+ + +S N + +GD Y+G
Sbjct: 151 DSGEAKRIHEFLQKWLSKHQEFS----SNPFYVAGDSYSG 186
>sp|Q95102|NRAM1_BISBI Natural resistance-associated macrophage protein 1 OS=Bison bison
GN=SLC11A1 PE=2 SV=1
Length = 548
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Query: 83 ANVDGYSPIYNENDWSPSGDVYTGGA--------TGLAIWAVTLAGLLAGG 125
+++ Y+PI+ N+ + + D+Y GG L IWAV GLLA G
Sbjct: 322 SSLQDYAPIFPRNNLTVAVDIYQGGVILGCLFGPAALYIWAV---GLLAAG 369
>sp|Q27946|NRAM1_BUBBU Natural resistance-associated macrophage protein 1 OS=Bubalus
bubalis GN=SLC11A1 PE=2 SV=1
Length = 548
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Query: 83 ANVDGYSPIYNENDWSPSGDVYTGGA--------TGLAIWAVTLAGLLAGG 125
+++ Y+PI+ N+ + + D+Y GG L IWAV GLLA G
Sbjct: 322 SSLHDYAPIFPRNNLTVAVDIYQGGVILGCLFGPAALYIWAV---GLLAAG 369
>sp|B0U0E8|SYL_FRAP2 Leucine--tRNA ligase OS=Francisella philomiragia subsp.
philomiragia (strain ATCC 25017) GN=leuS PE=3 SV=1
Length = 813
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN-VDG 87
A+ K++ G + +D+P+ + GM L++G S K + +DKYGA+ V
Sbjct: 541 ARFFHKLMRDQGLVTSDEPFKNLLTQGMVLKDGAKMSKSKGNTVDPQELIDKYGADTVRL 600
Query: 88 YS----PIYNENDWSPSG 101
+S P +WS +G
Sbjct: 601 FSMFAAPPEQSLEWSDTG 618
>sp|Q9CAU4|SCP4_ARATH Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4
PE=2 SV=1
Length = 441
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P ++ G LPSL T++ I D+P G + +
Sbjct: 92 SGLLYQNGPLAMKLDVYNGTLPSLVSTTYSWTKTSSMIFLDQPVGTGFSYSRTQLFNKPS 151
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+ K +++F+ K+ G ++ N + GD Y+G
Sbjct: 152 DTGEAKRIHEFLQKW----LGKHQEFSSNPFYVGGDSYSG 187
>sp|Q27981|NRAM1_BOVIN Natural resistance-associated macrophage protein 1 OS=Bos taurus
GN=SLC11A1 PE=2 SV=1
Length = 548
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Query: 83 ANVDGYSPIYNENDWSPSGDVYTGGAT--------GLAIWAVTLAGLLAGG 125
+++ Y+PI+ N+ + + D+Y GG L IWAV GLLA G
Sbjct: 322 SSLHDYAPIFPRNNLTVAVDIYQGGVILGCLFGPPALYIWAV---GLLAAG 369
>sp|Q21MG8|MURC_SACD2 UDP-N-acetylmuramate--L-alanine ligase OS=Saccharophagus
degradans (strain 2-40 / ATCC 43961 / DSM 17024)
GN=murC PE=3 SV=1
Length = 474
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 55 GMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNEN 95
G DLRE D + R+ G GV+ F+ + NVDG S + N +
Sbjct: 44 GSDLRES-DVT-RRLAGMGVHVFIGHHATNVDGASVVVNSS 82
>sp|Q9C7Z9|SCP18_ARATH Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18
PE=2 SV=2
Length = 464
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 5/105 (4%)
Query: 3 ASVMASSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREG 61
A S+L+ + P T + G LPSL TS+ I D+P G
Sbjct: 83 ACTALSALAFEIGPLTFKTEGYNGGLPSLVSTSYSWTKVASIIFLDQPVGTGYSYSTTPL 142
Query: 62 LDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+ K Y+F+ K+ +P + N GD Y G
Sbjct: 143 SYKPSDTGEAKQTYEFLQKWLVE----NPQFVSNPIYVGGDSYAG 183
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.131 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,413,962
Number of Sequences: 539616
Number of extensions: 2497990
Number of successful extensions: 4284
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 4264
Number of HSP's gapped (non-prelim): 47
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)