Query 032634
Match_columns 137
No_of_seqs 119 out of 362
Neff 3.7
Searched_HMMs 29240
Date Mon Mar 25 05:51:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032634.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032634hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1klx_A Cysteine rich protein B 99.4 1.1E-12 3.7E-17 92.6 6.9 51 81-134 79-129 (138)
2 1klx_A Cysteine rich protein B 99.3 1.8E-12 6.1E-17 91.5 6.6 50 82-134 44-93 (138)
3 3e4b_A ALGK; tetratricopeptide 99.0 2.1E-10 7.2E-15 94.5 6.0 52 80-134 339-390 (452)
4 3rjv_A Putative SEL1 repeat pr 99.0 3.9E-10 1.3E-14 83.2 6.7 51 80-133 70-120 (212)
5 3rjv_A Putative SEL1 repeat pr 99.0 6.6E-10 2.3E-14 82.0 5.6 52 80-134 146-200 (212)
6 3e4b_A ALGK; tetratricopeptide 98.9 6.9E-10 2.4E-14 91.4 5.2 50 81-134 305-354 (452)
7 2xm6_A Protein corresponding t 98.8 1.2E-08 4.2E-13 82.8 6.9 51 80-133 60-110 (490)
8 2xm6_A Protein corresponding t 98.7 2.1E-08 7.1E-13 81.4 6.9 52 80-134 96-147 (490)
9 1ouv_A Conserved hypothetical 98.4 1.7E-07 5.6E-12 69.2 4.7 49 81-132 204-252 (273)
10 1ouv_A Conserved hypothetical 98.4 8.4E-07 2.9E-11 65.4 6.9 50 80-132 59-108 (273)
11 1na3_A Designed protein CTPR2; 94.3 0.13 4.3E-06 30.8 5.5 48 80-132 26-73 (91)
12 3bee_A Putative YFRE protein; 94.1 0.13 4.6E-06 34.3 6.0 54 76-134 22-75 (93)
13 2l6j_A TPR repeat-containing p 93.4 0.32 1.1E-05 29.9 6.3 48 80-132 21-68 (111)
14 3vtx_A MAMA; tetratricopeptide 92.7 0.32 1.1E-05 33.0 6.1 48 80-132 124-171 (184)
15 1zu2_A Mitochondrial import re 92.3 0.15 5E-06 38.6 4.3 50 80-132 63-121 (158)
16 2kc7_A BFR218_protein; tetratr 92.2 0.34 1.2E-05 29.8 5.2 48 80-132 17-65 (99)
17 3ma5_A Tetratricopeptide repea 92.0 0.31 1.1E-05 31.2 5.0 46 80-130 24-69 (100)
18 4gcn_A Protein STI-1; structur 91.8 0.44 1.5E-05 31.8 5.9 46 80-130 25-70 (127)
19 2kck_A TPR repeat; tetratricop 91.7 0.66 2.3E-05 27.9 6.1 48 80-132 23-70 (112)
20 2v5f_A Prolyl 4-hydroxylase su 91.7 0.18 6.1E-06 33.3 3.7 31 97-131 4-34 (104)
21 4ga2_A E3 SUMO-protein ligase 91.4 0.49 1.7E-05 32.4 5.9 48 80-132 48-95 (150)
22 2pl2_A Hypothetical conserved 91.3 0.29 1E-05 35.3 4.8 44 81-130 136-179 (217)
23 4gco_A Protein STI-1; structur 90.6 0.69 2.4E-05 31.0 5.9 46 81-131 65-110 (126)
24 2kat_A Uncharacterized protein 90.3 0.79 2.7E-05 29.1 5.7 46 80-130 36-81 (115)
25 2dba_A Smooth muscle cell asso 90.3 0.92 3.1E-05 28.9 6.0 31 96-130 97-127 (148)
26 2lni_A Stress-induced-phosphop 90.2 0.92 3.2E-05 28.2 5.9 47 80-131 67-113 (133)
27 4i17_A Hypothetical protein; T 90.0 0.79 2.7E-05 32.3 6.0 47 81-131 25-71 (228)
28 1elw_A TPR1-domain of HOP; HOP 89.9 1.5 5E-05 26.4 6.5 48 80-132 55-102 (118)
29 2v5f_A Prolyl 4-hydroxylase su 89.8 0.74 2.5E-05 30.2 5.4 47 80-130 22-74 (104)
30 3sz7_A HSC70 cochaperone (SGT) 89.7 0.88 3E-05 30.7 5.9 45 81-130 63-107 (164)
31 2xcb_A PCRH, regulatory protei 89.7 0.72 2.5E-05 30.7 5.3 30 96-129 84-113 (142)
32 1na0_A Designed protein CTPR3; 89.4 1.3 4.4E-05 26.9 5.9 47 80-131 60-106 (125)
33 3k9i_A BH0479 protein; putativ 89.4 0.069 2.4E-06 34.7 0.0 45 81-130 45-89 (117)
34 3upv_A Heat shock protein STI1 89.3 1.1 3.8E-05 28.7 5.9 45 81-130 56-100 (126)
35 2xev_A YBGF; tetratricopeptide 89.3 0.96 3.3E-05 28.5 5.5 47 80-131 56-105 (129)
36 2fbn_A 70 kDa peptidylprolyl i 89.2 0.89 3.1E-05 31.7 5.7 47 80-131 105-151 (198)
37 3sz7_A HSC70 cochaperone (SGT) 89.2 0.85 2.9E-05 30.8 5.4 48 80-132 28-75 (164)
38 1elr_A TPR2A-domain of HOP; HO 89.0 1.2 4.3E-05 27.3 5.8 49 80-132 55-109 (131)
39 3upv_A Heat shock protein STI1 88.7 1 3.6E-05 28.8 5.4 48 80-132 21-68 (126)
40 3rkv_A Putative peptidylprolyl 88.7 1.2 4E-05 30.0 5.9 46 81-131 81-126 (162)
41 2xcb_A PCRH, regulatory protei 88.6 0.89 3.1E-05 30.3 5.2 48 80-132 35-82 (142)
42 3q49_B STIP1 homology and U bo 88.6 1.4 4.6E-05 28.1 5.9 45 81-130 61-105 (137)
43 1na0_A Designed protein CTPR3; 88.3 1.6 5.5E-05 26.4 5.9 48 80-132 26-73 (125)
44 1hh8_A P67PHOX, NCF-2, neutrop 88.3 1.4 4.9E-05 30.2 6.2 48 80-132 54-101 (213)
45 4gco_A Protein STI-1; structur 88.0 1.1 3.9E-05 29.9 5.4 48 80-132 30-77 (126)
46 3gyz_A Chaperone protein IPGC; 87.9 1.3 4.3E-05 31.4 5.9 47 80-131 53-99 (151)
47 3k9i_A BH0479 protein; putativ 87.9 1.5 5E-05 28.2 5.7 45 81-132 8-57 (117)
48 2vgx_A Chaperone SYCD; alterna 87.7 0.98 3.4E-05 31.0 5.1 46 80-130 72-117 (148)
49 2kck_A TPR repeat; tetratricop 87.6 1.8 6.2E-05 25.8 5.7 49 80-133 57-108 (112)
50 2vyi_A SGTA protein; chaperone 87.6 1.8 6.3E-05 26.4 5.9 47 80-131 63-109 (131)
51 1hxi_A PEX5, peroxisome target 87.5 1.3 4.5E-05 29.3 5.4 48 80-132 34-81 (121)
52 2e2e_A Formate-dependent nitri 87.2 1.8 6.3E-05 29.2 6.1 48 80-132 98-145 (177)
53 1a17_A Serine/threonine protei 87.2 1.8 6.1E-05 28.0 5.9 47 80-131 64-110 (166)
54 4gcn_A Protein STI-1; structur 87.0 2 7E-05 28.5 6.2 47 80-130 59-111 (127)
55 2lni_A Stress-induced-phosphop 86.9 2.2 7.6E-05 26.4 6.0 46 80-132 33-80 (133)
56 1elw_A TPR1-domain of HOP; HOP 86.4 2.1 7.1E-05 25.7 5.5 48 80-132 21-68 (118)
57 3ma5_A Tetratricopeptide repea 86.4 0.66 2.2E-05 29.6 3.3 34 95-132 4-37 (100)
58 1elr_A TPR2A-domain of HOP; HO 86.3 2.1 7.1E-05 26.2 5.6 47 80-131 21-67 (131)
59 3ro3_A PINS homolog, G-protein 86.2 2.6 8.8E-05 26.4 6.1 47 80-130 66-117 (164)
60 3q49_B STIP1 homology and U bo 86.2 1.4 4.8E-05 28.0 4.9 48 80-132 26-73 (137)
61 3urz_A Uncharacterized protein 85.8 1.3 4.5E-05 31.6 5.0 48 80-132 71-118 (208)
62 3rkv_A Putative peptidylprolyl 85.7 1.6 5.6E-05 29.3 5.2 49 80-132 28-93 (162)
63 2kat_A Uncharacterized protein 85.5 1.7 5.8E-05 27.5 5.0 44 82-132 4-49 (115)
64 1hxi_A PEX5, peroxisome target 85.4 1.8 6E-05 28.6 5.2 46 80-132 68-115 (121)
65 3gyz_A Chaperone protein IPGC; 85.3 1.3 4.5E-05 31.3 4.8 47 80-131 87-133 (151)
66 2dba_A Smooth muscle cell asso 85.1 2.6 8.9E-05 26.7 5.7 45 80-131 45-94 (148)
67 2fo7_A Synthetic consensus TPR 84.8 3.7 0.00013 24.8 6.2 30 97-130 68-97 (136)
68 1a17_A Serine/threonine protei 84.7 3 0.0001 27.0 6.0 48 80-132 30-77 (166)
69 3uq3_A Heat shock protein STI1 84.5 1.8 6E-05 29.9 5.0 45 80-130 22-66 (258)
70 3ro3_A PINS homolog, G-protein 84.3 1.8 6.1E-05 27.2 4.6 47 80-130 26-77 (164)
71 2vyi_A SGTA protein; chaperone 84.2 3.6 0.00012 25.0 5.9 47 80-131 29-75 (131)
72 2vgx_A Chaperone SYCD; alterna 84.0 2 6.8E-05 29.4 5.1 48 80-132 38-85 (148)
73 3u4t_A TPR repeat-containing p 83.9 0.69 2.3E-05 32.8 2.7 46 81-131 92-137 (272)
74 2xev_A YBGF; tetratricopeptide 83.7 2 7E-05 27.0 4.7 48 80-132 19-69 (129)
75 4abn_A Tetratricopeptide repea 83.6 1.4 4.7E-05 36.1 4.8 49 80-132 238-288 (474)
76 2ifu_A Gamma-SNAP; membrane fu 83.6 2 6.9E-05 32.5 5.4 45 81-130 94-143 (307)
77 3edt_B KLC 2, kinesin light ch 83.5 1.7 5.8E-05 30.3 4.6 48 80-131 60-114 (283)
78 2fo7_A Synthetic consensus TPR 83.2 3.8 0.00013 24.7 5.7 48 80-132 18-65 (136)
79 2ho1_A Type 4 fimbrial biogene 82.9 3.9 0.00013 28.5 6.4 31 96-130 103-133 (252)
80 4abn_A Tetratricopeptide repea 82.6 2.7 9.2E-05 34.4 6.2 48 80-132 120-167 (474)
81 3vtx_A MAMA; tetratricopeptide 82.2 3.7 0.00013 27.6 5.9 48 80-132 22-69 (184)
82 3u3w_A Transcriptional activat 81.9 3.4 0.00012 30.7 6.1 47 81-130 214-265 (293)
83 3u4t_A TPR repeat-containing p 81.9 1.5 5E-05 31.1 3.8 47 82-132 198-251 (272)
84 3ieg_A DNAJ homolog subfamily 81.6 4.5 0.00016 29.1 6.4 48 80-132 289-336 (359)
85 2pl2_A Hypothetical conserved 81.6 3 0.0001 29.9 5.4 48 80-132 101-148 (217)
86 3edt_B KLC 2, kinesin light ch 81.3 2.3 7.8E-05 29.6 4.6 48 80-131 102-156 (283)
87 1qqe_A Vesicular transport pro 81.1 4 0.00014 30.6 6.2 48 80-130 94-146 (292)
88 3uq3_A Heat shock protein STI1 80.8 4.8 0.00016 27.7 6.1 48 80-131 55-108 (258)
89 2qfc_A PLCR protein; TPR, HTH, 80.8 2.9 0.0001 31.1 5.3 46 81-130 173-224 (293)
90 2if4_A ATFKBP42; FKBP-like, al 80.8 3.8 0.00013 32.0 6.2 47 81-132 248-294 (338)
91 3as5_A MAMA; tetratricopeptide 80.7 5 0.00017 25.9 5.9 29 97-129 109-137 (186)
92 3as5_A MAMA; tetratricopeptide 80.4 5.4 0.00019 25.7 5.9 29 97-129 143-171 (186)
93 1xnf_A Lipoprotein NLPI; TPR, 80.1 3.7 0.00013 28.7 5.4 29 97-129 110-138 (275)
94 1p5q_A FKBP52, FK506-binding p 80.0 3.6 0.00012 32.0 5.9 47 81-132 214-260 (336)
95 4ga2_A E3 SUMO-protein ligase 79.9 0.84 2.9E-05 31.2 1.9 46 80-132 14-61 (150)
96 2fbn_A 70 kDa peptidylprolyl i 79.8 3.5 0.00012 28.6 5.2 29 99-131 89-117 (198)
97 4g1t_A Interferon-induced prot 79.6 0.64 2.2E-05 36.1 1.4 35 95-133 427-461 (472)
98 1na3_A Designed protein CTPR2; 79.6 1.6 5.6E-05 25.7 3.0 32 97-132 8-39 (91)
99 1xnf_A Lipoprotein NLPI; TPR, 79.5 4.9 0.00017 28.1 5.9 47 81-132 61-107 (275)
100 1ihg_A Cyclophilin 40; ppiase 78.2 2.8 9.7E-05 33.6 4.8 46 81-131 291-336 (370)
101 3qky_A Outer membrane assembly 78.1 4.3 0.00015 29.2 5.4 45 80-131 32-81 (261)
102 1p5q_A FKBP52, FK506-binding p 77.5 4.6 0.00016 31.5 5.7 31 98-132 196-226 (336)
103 1kt0_A FKBP51, 51 kDa FK506-bi 76.9 5.7 0.00019 32.5 6.3 47 81-132 335-381 (457)
104 3gw4_A Uncharacterized protein 76.6 7.5 0.00026 26.0 5.9 47 80-130 83-135 (203)
105 3ro2_A PINS homolog, G-protein 76.4 5.5 0.00019 28.1 5.4 48 81-132 281-333 (338)
106 2vq2_A PILW, putative fimbrial 76.4 10 0.00035 25.4 6.5 45 81-130 60-105 (225)
107 2h6f_A Protein farnesyltransfe 76.3 6.5 0.00022 32.0 6.5 50 79-132 113-162 (382)
108 2ho1_A Type 4 fimbrial biogene 75.6 5 0.00017 28.0 5.0 47 81-132 55-101 (252)
109 3ulq_A Response regulator aspa 75.3 6.9 0.00024 29.8 6.1 47 80-130 201-252 (383)
110 1hh8_A P67PHOX, NCF-2, neutrop 75.2 3.8 0.00013 28.0 4.2 45 80-132 23-67 (213)
111 2yhc_A BAMD, UPF0169 lipoprote 74.9 6.1 0.00021 28.2 5.4 48 80-131 21-70 (225)
112 1qqe_A Vesicular transport pro 74.8 11 0.00036 28.2 6.9 49 80-132 135-188 (292)
113 2ifu_A Gamma-SNAP; membrane fu 74.6 7.5 0.00026 29.3 6.1 47 80-130 132-183 (307)
114 3gw4_A Uncharacterized protein 74.0 12 0.00041 25.0 6.4 48 80-131 43-95 (203)
115 3sf4_A G-protein-signaling mod 74.0 7.9 0.00027 28.6 5.9 47 80-130 284-335 (406)
116 3q15_A PSP28, response regulat 74.0 7.3 0.00025 29.8 5.9 47 80-130 199-250 (378)
117 3q15_A PSP28, response regulat 74.0 4.2 0.00014 31.2 4.6 48 80-131 239-290 (378)
118 4i17_A Hypothetical protein; T 74.0 6.3 0.00022 27.5 5.2 46 80-132 59-106 (228)
119 4eqf_A PEX5-related protein; a 73.9 7.8 0.00027 28.8 5.9 31 96-130 245-275 (365)
120 3hym_B Cell division cycle pro 73.8 7 0.00024 28.0 5.4 31 96-130 234-264 (330)
121 2l6j_A TPR repeat-containing p 73.8 3.3 0.00011 25.1 3.3 32 97-132 3-34 (111)
122 2vq2_A PILW, putative fimbrial 73.8 9.5 0.00032 25.5 5.9 48 80-132 25-72 (225)
123 3u3w_A Transcriptional activat 73.6 6.3 0.00022 29.2 5.4 47 80-130 172-224 (293)
124 3hym_B Cell division cycle pro 73.5 4.5 0.00015 29.0 4.3 48 80-132 253-300 (330)
125 4gyw_A UDP-N-acetylglucosamine 73.3 5.7 0.0002 35.5 5.9 30 96-129 41-70 (723)
126 2qfc_A PLCR protein; TPR, HTH, 73.3 6.4 0.00022 29.2 5.3 46 80-129 213-264 (293)
127 1kt0_A FKBP51, 51 kDa FK506-bi 73.2 7.7 0.00026 31.7 6.2 48 81-132 286-347 (457)
128 4a1s_A PINS, partner of inscut 73.1 4.9 0.00017 30.3 4.7 46 81-130 104-154 (411)
129 1fch_A Peroxisomal targeting s 72.9 7.9 0.00027 28.4 5.7 45 81-130 235-279 (368)
130 3ulq_A Response regulator aspa 72.9 5.2 0.00018 30.5 4.8 47 80-130 241-292 (383)
131 1ihg_A Cyclophilin 40; ppiase 72.8 4.6 0.00016 32.4 4.7 33 96-132 271-303 (370)
132 3nf1_A KLC 1, kinesin light ch 72.5 5.5 0.00019 28.2 4.6 48 80-131 86-140 (311)
133 2y4t_A DNAJ homolog subfamily 72.5 9.7 0.00033 28.9 6.3 47 80-131 312-358 (450)
134 3ieg_A DNAJ homolog subfamily 72.4 11 0.00036 27.2 6.1 48 80-132 54-101 (359)
135 3ro2_A PINS homolog, G-protein 72.3 11 0.00037 26.5 6.1 46 81-130 241-291 (338)
136 4gyw_A UDP-N-acetylglucosamine 72.2 6.2 0.00021 35.3 5.9 45 81-130 61-105 (723)
137 2c2l_A CHIP, carboxy terminus 72.1 10 0.00036 28.4 6.3 32 96-131 36-67 (281)
138 2r5s_A Uncharacterized protein 71.3 12 0.00041 25.4 6.0 46 82-132 93-138 (176)
139 4eqf_A PEX5-related protein; a 71.1 7.2 0.00025 29.0 5.2 48 80-131 194-242 (365)
140 1fch_A Peroxisomal targeting s 70.7 11 0.00036 27.8 5.9 48 80-131 198-246 (368)
141 3nf1_A KLC 1, kinesin light ch 70.6 6.4 0.00022 27.9 4.6 48 80-131 128-182 (311)
142 3urz_A Uncharacterized protein 70.5 6 0.00021 28.0 4.5 46 80-132 21-84 (208)
143 2vsy_A XCC0866; transferase, g 70.3 8.5 0.00029 31.5 5.9 45 81-130 75-119 (568)
144 2e2e_A Formate-dependent nitri 70.3 3.1 0.00011 28.0 2.8 31 96-130 76-109 (177)
145 3fp2_A TPR repeat-containing p 70.0 9.7 0.00033 29.6 5.9 48 80-132 445-492 (537)
146 2q7f_A YRRB protein; TPR, prot 69.5 13 0.00044 25.4 5.9 47 81-132 75-121 (243)
147 4a1s_A PINS, partner of inscut 68.5 7.1 0.00024 29.4 4.7 47 80-130 280-331 (411)
148 1wao_1 Serine/threonine protei 68.4 11 0.00036 31.3 6.1 30 97-130 39-68 (477)
149 2c2l_A CHIP, carboxy terminus 68.3 5.7 0.00019 29.9 4.1 45 80-131 55-101 (281)
150 3cv0_A Peroxisome targeting si 68.1 13 0.00046 26.4 5.9 45 81-130 190-234 (327)
151 1wao_1 Serine/threonine protei 67.6 7.4 0.00025 32.2 5.0 47 80-131 57-103 (477)
152 3cv0_A Peroxisome targeting si 67.1 15 0.00051 26.1 5.9 47 80-131 155-201 (327)
153 3sf4_A G-protein-signaling mod 66.5 14 0.00048 27.2 5.8 46 80-130 26-75 (406)
154 2q7f_A YRRB protein; TPR, prot 65.8 15 0.00051 25.1 5.5 46 81-131 109-154 (243)
155 2y4t_A DNAJ homolog subfamily 64.5 13 0.00044 28.3 5.4 46 81-131 44-89 (450)
156 2pzi_A Probable serine/threoni 64.4 11 0.00038 32.5 5.7 47 81-132 451-497 (681)
157 1w3b_A UDP-N-acetylglucosamine 64.3 15 0.00051 27.6 5.7 45 81-130 153-197 (388)
158 1w3b_A UDP-N-acetylglucosamine 64.1 22 0.00074 26.7 6.6 31 96-130 303-333 (388)
159 3qky_A Outer membrane assembly 63.8 9.7 0.00033 27.3 4.4 52 80-131 69-126 (261)
160 3mkr_A Coatomer subunit epsilo 62.6 15 0.0005 27.9 5.5 46 81-131 184-229 (291)
161 2xpi_A Anaphase-promoting comp 62.3 14 0.0005 29.3 5.6 48 80-132 533-580 (597)
162 2r5s_A Uncharacterized protein 62.0 4.9 0.00017 27.4 2.5 47 80-131 23-69 (176)
163 2xpi_A Anaphase-promoting comp 61.8 18 0.00062 28.7 6.0 32 96-131 405-436 (597)
164 2gw1_A Mitochondrial precursor 61.1 19 0.00064 27.6 5.9 48 80-132 432-479 (514)
165 2gw1_A Mitochondrial precursor 61.1 11 0.00037 29.0 4.5 32 96-131 71-102 (514)
166 2vsy_A XCC0866; transferase, g 59.9 14 0.00048 30.2 5.3 46 80-132 40-87 (568)
167 1hz4_A MALT regulatory protein 59.6 13 0.00043 28.0 4.6 46 81-130 32-81 (373)
168 4g1t_A Interferon-induced prot 59.5 25 0.00084 27.0 6.3 47 80-130 68-122 (472)
169 2hr2_A Hypothetical protein; a 59.0 15 0.00051 27.4 4.9 47 80-130 74-130 (159)
170 2ond_A Cleavage stimulation fa 57.9 18 0.0006 27.0 5.1 48 80-131 81-128 (308)
171 3u64_A Protein TP_0956; tetrat 57.1 15 0.00051 30.7 5.0 51 80-134 221-272 (301)
172 3qou_A Protein YBBN; thioredox 53.5 17 0.00059 27.2 4.4 46 81-131 135-180 (287)
173 1pc2_A Mitochondria fission pr 52.6 15 0.00052 27.4 4.0 46 81-130 53-99 (152)
174 3fp2_A TPR repeat-containing p 50.5 14 0.00049 28.6 3.7 47 81-132 43-89 (537)
175 1zu2_A Mitochondrial import re 49.4 14 0.00048 27.5 3.4 49 81-132 20-76 (158)
176 2hr2_A Hypothetical protein; a 49.2 46 0.0016 24.6 6.2 47 81-131 29-86 (159)
177 1hz4_A MALT regulatory protein 48.8 29 0.00098 26.0 5.0 47 81-131 111-164 (373)
178 3qou_A Protein YBBN; thioredox 48.6 26 0.00091 26.2 4.8 46 82-132 204-249 (287)
179 2if4_A ATFKBP42; FKBP-like, al 47.9 25 0.00085 27.3 4.7 29 100-132 232-260 (338)
180 2ond_A Cleavage stimulation fa 45.9 25 0.00086 26.2 4.3 45 80-131 116-163 (308)
181 4f3v_A ESX-1 secretion system 43.2 27 0.00093 28.1 4.3 45 80-131 188-237 (282)
182 3mkr_A Coatomer subunit epsilo 41.9 53 0.0018 24.8 5.6 48 80-131 217-264 (291)
183 2h6f_A Protein farnesyltransfe 41.4 19 0.00065 29.1 3.2 46 80-132 149-196 (382)
184 2ooe_A Cleavage stimulation fa 40.7 75 0.0026 25.5 6.6 48 80-132 408-455 (530)
185 2yhc_A BAMD, UPF0169 lipoprote 38.0 59 0.002 22.9 5.1 47 81-132 165-214 (225)
186 2pzi_A Probable serine/threoni 36.7 25 0.00085 30.3 3.3 31 97-131 533-563 (681)
187 1ny9_A Transcriptional activat 36.6 84 0.0029 22.0 5.7 53 73-125 74-137 (143)
188 4f3v_A ESX-1 secretion system 34.7 49 0.0017 26.6 4.6 31 99-133 172-202 (282)
189 1ya0_A SMG-7 transcript varian 30.5 62 0.0021 28.1 4.8 46 80-132 169-216 (497)
190 3ly7_A Transcriptional activat 30.3 1.1E+02 0.0038 25.8 6.3 45 80-130 294-338 (372)
191 4b4t_Q 26S proteasome regulato 27.5 1.6E+02 0.0056 22.0 6.2 28 98-129 175-202 (434)
192 2o35_A Hypothetical protein DU 26.9 66 0.0023 23.4 3.7 17 72-88 38-54 (105)
193 3u64_A Protein TP_0956; tetrat 26.2 46 0.0016 27.7 3.1 35 97-131 198-233 (301)
194 3t5x_A PCI domain-containing p 25.0 54 0.0019 24.8 3.1 27 101-131 17-43 (203)
195 1pc2_A Mitochondria fission pr 24.3 1.9E+02 0.0066 21.3 6.0 47 82-132 17-65 (152)
196 3mv2_B Coatomer subunit epsilo 23.8 85 0.0029 25.6 4.3 33 96-132 98-130 (310)
197 3qww_A SET and MYND domain-con 21.4 79 0.0027 26.4 3.7 46 81-130 358-410 (433)
198 2dak_A Ubiquitin carboxyl-term 20.9 87 0.003 19.6 3.0 32 91-127 15-46 (63)
199 2cpw_A CBL-interacting protein 20.7 1.2E+02 0.0042 19.2 3.8 32 91-126 25-56 (64)
No 1
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.37 E-value=1.1e-12 Score=92.63 Aligned_cols=51 Identities=12% Similarity=0.214 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCCCC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVDLL 134 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg~~ 134 (137)
.|..||+ ++|+.|++.|+++||.||..|.||++|+++|++||++|+++|+.
T Consensus 79 ~A~~~~~---~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~ 129 (138)
T 1klx_A 79 KAAQYYS---KACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSE 129 (138)
T ss_dssp HHHHHHH---HHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHH---HHHcCCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCCH
Confidence 4666776 56677777777777777777777777777777777777766653
No 2
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.34 E-value=1.8e-12 Score=91.54 Aligned_cols=50 Identities=8% Similarity=0.079 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCCCC
Q 032634 82 VQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVDLL 134 (137)
Q Consensus 82 A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg~~ 134 (137)
|..||+ ++|+.|++.|+++||.||..|.||++|+.+|++||++||++|+.
T Consensus 44 A~~~~~---~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~ 93 (138)
T 1klx_A 44 LFQYLS---KACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQ 93 (138)
T ss_dssp HHHHHH---HHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHH---HHHcCCCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcCCCH
Confidence 999999 79999999999999999999999999999999999999999874
No 3
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.04 E-value=2.1e-10 Score=94.46 Aligned_cols=52 Identities=13% Similarity=0.150 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCCCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVDLL 134 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg~~ 134 (137)
+.|..||+ ++|+.|++.||++||.||..|.||++|+.+|..||++|+++|..
T Consensus 339 ~~A~~~~~---~Aa~~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~A~~~g~~ 390 (452)
T 3e4b_A 339 QKALDHLL---TAARNGQNSADFAIAQLFSQGKGTKPDPLNAYVFSQLAKAQDTP 390 (452)
T ss_dssp HHHHHHHH---HHHTTTCTTHHHHHHHHHHSCTTBCCCHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHH---HHHhhChHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHCCCH
Confidence 35778887 68888888888888888888888888888888888888888764
No 4
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.03 E-value=3.9e-10 Score=83.20 Aligned_cols=51 Identities=10% Similarity=0.134 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVDL 133 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg~ 133 (137)
+.|..||+ ++++.|++.|+++||.+|..|.||++|+.+|++||++|++.|.
T Consensus 70 ~~A~~~~~---~A~~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 120 (212)
T 3rjv_A 70 PQARQLAE---KAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSE 120 (212)
T ss_dssp HHHHHHHH---HHHHTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTT
T ss_pred HHHHHHHH---HHHHCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCC
Confidence 45888888 6888899999999999999999999999999999999998876
No 5
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.96 E-value=6.6e-10 Score=81.96 Aligned_cols=52 Identities=13% Similarity=0.100 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHc-CCHHHHHHHHHHhhcCCC--ccccHHHHHHHHHHhhcCCCC
Q 032634 80 DCVQRWFQDTLREAKN-GDKAMEVLVGQMYLSGYG--VAEMKKRGMLGLRELPQVDLL 134 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~-GD~~AQ~~LG~MY~~G~G--V~qD~~KA~~Wf~KAAeqg~~ 134 (137)
+.|..||+ ++++. |++.|+++||.||..|.| |++|+.+|++||++|+++|+.
T Consensus 146 ~~A~~~~~---~A~~~~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~ 200 (212)
T 3rjv_A 146 VKASEYFK---GSSSLSRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFD 200 (212)
T ss_dssp HHHHHHHH---HHHHTSCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHH---HHHHcCCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCH
Confidence 46889999 78888 999999999999999998 999999999999999999874
No 6
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.94 E-value=6.9e-10 Score=91.38 Aligned_cols=50 Identities=16% Similarity=0.244 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCCCC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVDLL 134 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg~~ 134 (137)
.|..||+ +++ .|++.|+++||.||..|.||++|+.+|++||++|+++|+.
T Consensus 305 ~A~~~~~---~Aa-~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~ 354 (452)
T 3e4b_A 305 AAEAHFE---KAV-GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQN 354 (452)
T ss_dssp HHHHHHH---TTT-TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTTCT
T ss_pred HHHHHHH---HHh-CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhChH
Confidence 3556666 455 6666666666666666666666666666666666666654
No 7
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.76 E-value=1.2e-08 Score=82.77 Aligned_cols=51 Identities=24% Similarity=0.453 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVDL 133 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg~ 133 (137)
+.|..||+ ++++.|++.|++.||.+|..|.||++|+.+|++||++|+++|+
T Consensus 60 ~~A~~~~~---~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~ 110 (490)
T 2xm6_A 60 TQAMDWFR---RAAEQGYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKGL 110 (490)
T ss_dssp HHHHHHHH---HHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHH---HHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 45778888 6888888888888888888888888888888888888888775
No 8
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.72 E-value=2.1e-08 Score=81.44 Aligned_cols=52 Identities=21% Similarity=0.257 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCCCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVDLL 134 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg~~ 134 (137)
+.|..||+ ++++.|++.|+++||.+|..|.||++|+.+|+.||++|+++|+.
T Consensus 96 ~~A~~~~~---~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~ 147 (490)
T 2xm6_A 96 AQAVIWYK---KAALKGLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQGRD 147 (490)
T ss_dssp HHHHHHHH---HHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHH---HHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCH
Confidence 45788888 68888899999999999988888888999999999888888753
No 9
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.44 E-value=1.7e-07 Score=69.20 Aligned_cols=49 Identities=12% Similarity=0.166 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
.|..||+ ++++.|++.++++||.+|..|.|+..|+++|++||++|++.|
T Consensus 204 ~A~~~~~---~a~~~~~~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~ 252 (273)
T 1ouv_A 204 EALARYS---KACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 252 (273)
T ss_dssp HHHHHHH---HHHHTTCHHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHT
T ss_pred HHHHHHH---HHHhCCCHHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcC
Confidence 3555555 455555555555555555555555555555555555555544
No 10
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.37 E-value=8.4e-07 Score=65.40 Aligned_cols=50 Identities=14% Similarity=0.256 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..||+ ++++.|++.++++||.+|..|.|+..|+.+|+.||++|++.|
T Consensus 59 ~~A~~~~~---~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~ 108 (273)
T 1ouv_A 59 KKAASFYA---KACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK 108 (273)
T ss_dssp HHHHHHHH---HHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHH---HHHHCCCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC
Confidence 34666666 566666777777777777776667777777777777766654
No 11
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=94.27 E-value=0.13 Score=30.77 Aligned_cols=48 Identities=13% Similarity=0.157 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..||+.+++. ...+..+.++||.+|.. ..++++|..+|++|.+.+
T Consensus 26 ~~A~~~~~~a~~~-~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~ 73 (91)
T 1na3_A 26 DEAIEYYQKALEL-DPNNAEAWYNLGNAYYK----QGDYDEAIEYYQKALELD 73 (91)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc-CCCCHHHHHHHHHHHHH----HhhHHHHHHHHHHHHhcC
Confidence 4677888853322 34689999999999985 468999999999998753
No 12
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.15 E-value=0.13 Score=34.30 Aligned_cols=54 Identities=13% Similarity=0.019 Sum_probs=44.0
Q ss_pred hhhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCCCC
Q 032634 76 QVVSDCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVDLL 134 (137)
Q Consensus 76 ~vv~d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg~~ 134 (137)
+++.+.+..+|+.+++ .+-.++.|.++||.+|+. ..|+.+|+..|++..+++-.
T Consensus 22 ~~~~~~A~~~l~~AL~-~dp~~~rA~~~lg~~~~~----~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 22 QAMTDEVSLLLEQALQ-LEPYNEAALSLIANDHFI----SFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp TCCCHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTCCCT
T ss_pred CCCCHHHHHHHHHHHH-HCcCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCC
Confidence 3456788899986443 456899999999999996 58999999999999888643
No 13
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=93.36 E-value=0.32 Score=29.91 Aligned_cols=48 Identities=0% Similarity=-0.115 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++. .-.++.+.+++|.+|.. ..++++|+.+|++|.+.+
T Consensus 21 ~~A~~~~~~al~~-~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 68 (111)
T 2l6j_A 21 REAVHCYDQLITA-QPQNPVGYSNKAMALIK----LGEYTQAIQMCQQGLRYT 68 (111)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHhc-CCCCHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhC
Confidence 4677888853332 34689999999999984 358999999999998764
No 14
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=92.75 E-value=0.32 Score=33.05 Aligned_cols=48 Identities=13% Similarity=0.144 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++. .-.++.+.++||.+|.. ..++++|+.+|++|.+.+
T Consensus 124 ~~A~~~~~~~l~~-~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 171 (184)
T 3vtx_A 124 DKAIEAYEKTISI-KPGFIRAYQSIGLAYEG----KGLRDEAVKYFKKALEKE 171 (184)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHh-cchhhhHHHHHHHHHHH----CCCHHHHHHHHHHHHhCC
Confidence 4577778743322 33688899999999884 468899999999987654
No 15
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=92.34 E-value=0.15 Score=38.57 Aligned_cols=50 Identities=8% Similarity=-0.003 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHc--CCHHHHHHHHHHhhc-CCCccc------cHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKN--GDKAMEVLVGQMYLS-GYGVAE------MKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~--GD~~AQ~~LG~MY~~-G~GV~q------D~~KA~~Wf~KAAeqg 132 (137)
+.|...|+ ++.+. .+..|.++||..|.. |.-+|. ++++|+.+|++|.+.+
T Consensus 63 ~eAi~~le---~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~ 121 (158)
T 1zu2_A 63 QEAITKFE---EALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQ 121 (158)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhC
Confidence 57888888 45554 589999999999975 443555 8999999999998753
No 16
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=92.17 E-value=0.34 Score=29.81 Aligned_cols=48 Identities=10% Similarity=0.148 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHcCCHH-HHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKA-MEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~-AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++ ..-.++. +.+++|.+|.. ..++++|+.+|++|.+.+
T Consensus 17 ~~A~~~~~~al~-~~p~~~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~~~ 65 (99)
T 2kc7_A 17 ENALQALEEFLQ-TEPVGKDEAYYLMGNAYRK----LGDWQKALNNYQSAIELN 65 (99)
T ss_dssp HHHHHHHHHHHH-HCSSTHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-HCCCcHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcC
Confidence 457788874322 2335788 99999999984 468999999999998654
No 17
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=92.02 E-value=0.31 Score=31.17 Aligned_cols=46 Identities=7% Similarity=0.068 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|+.+++ ..-.++.+.++||.+|.. ..++++|+.+|++|.+
T Consensus 24 ~~A~~~~~~al~-~~p~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~ 69 (100)
T 3ma5_A 24 SRALALFEELVE-TDPDYVGTYYHLGKLYER----LDRTDDAIDTYAQGIE 69 (100)
T ss_dssp HHHHHHHHHHHH-HSTTCTHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHh
Confidence 467888984332 223588999999999985 4689999999999875
No 18
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=91.84 E-value=0.44 Score=31.85 Aligned_cols=46 Identities=2% Similarity=-0.008 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|..+++. .-.++.+.++||.+|.. ..++.+|+.+|++|.+
T Consensus 25 ~~A~~~y~~Al~~-~p~~~~~~~nlg~~~~~----~~~~~~A~~~~~~al~ 70 (127)
T 4gcn_A 25 EKAHVHYDKAIEL-DPSNITFYNNKAAVYFE----EKKFAECVQFCEKAVE 70 (127)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCCCHHHHHhHHHHHHH----hhhHHHHHHHHHHHHH
Confidence 4678899854332 34689999999999985 4699999999999975
No 19
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=91.73 E-value=0.66 Score=27.87 Aligned_cols=48 Identities=8% Similarity=0.020 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|..+++. .-.+..+.+++|.+|..- .++++|..+|++|.+.+
T Consensus 23 ~~A~~~~~~a~~~-~~~~~~~~~~~a~~~~~~----~~~~~A~~~~~~a~~~~ 70 (112)
T 2kck_A 23 TESIDLFEKAIQL-DPEESKYWLMKGKALYNL----ERYEEAVDCYNYVINVI 70 (112)
T ss_dssp HHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHh-CcCCHHHHHHHHHHHHHc----cCHHHHHHHHHHHHHhC
Confidence 3466666632221 234677778888877642 46788888888777653
No 20
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=91.68 E-value=0.18 Score=33.29 Aligned_cols=31 Identities=6% Similarity=-0.068 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 97 DKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 97 D~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
++.-|+.||..|+. ..|+.+|..||+.|.+.
T Consensus 4 sa~dc~~lG~~~~~----~~~y~~A~~W~~~Al~~ 34 (104)
T 2v5f_A 4 TAEDCFELGKVAYT----EADYYHTELWMEQALRQ 34 (104)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH----ccchHHHHHHHHHHHHh
Confidence 45678999999994 48999999999999874
No 21
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=91.40 E-value=0.49 Score=32.39 Aligned_cols=48 Identities=13% Similarity=0.264 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++ ..-.++.+.++||.+|.. ..++++|+.+|++|.+.+
T Consensus 48 ~~A~~~~~~al~-~~p~~~~a~~~lg~~~~~----~~~~~~A~~~~~~al~~~ 95 (150)
T 4ga2_A 48 DLAKKYICTYIN-VQERDPKAHRFLGLLYEL----EENTDKAVECYRRSVELN 95 (150)
T ss_dssp HHHHHHHHHHHH-HCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-hCCCCHHHHHHHHHHHHH----cCchHHHHHHHHHHHHhC
Confidence 467788874332 233689999999999884 468899999999987643
No 22
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=91.32 E-value=0.29 Score=35.27 Aligned_cols=44 Identities=9% Similarity=0.111 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.|..+|+.+++.. .++.+.++||.+|..- .++++|+.+|++|.+
T Consensus 136 ~A~~~~~~al~~~--~~~~~~~~la~~~~~~----g~~~~A~~~~~~al~ 179 (217)
T 2pl2_A 136 KAEASLKQALALE--DTPEIRSALAELYLSM----GRLDEALAQYAKALE 179 (217)
T ss_dssp HHHHHHHHHHHHC--CCHHHHHHHHHHHHHH----TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc--cchHHHHHHHHHHHHc----CCHHHHHHHHHHHHH
Confidence 4556666544433 5666666666666532 466666666666654
No 23
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=90.56 E-value=0.69 Score=31.01 Aligned_cols=46 Identities=7% Similarity=-0.100 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
.|..+|+.+++ ..-.++.+.++||.+|.. ..++++|+.+|++|.+.
T Consensus 65 ~A~~~~~~al~-~~p~~~~a~~~lg~~~~~----~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 65 RALDDCDTCIR-LDSKFIKGYIRKAACLVA----MREWSKAQRAYEDALQV 110 (126)
T ss_dssp HHHHHHHHHHH-HCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hhhhhhHHHHHHHHHHHH----CCCHHHHHHHHHHHHHH
Confidence 45566653222 133566677777777663 34667777777776553
No 24
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=90.31 E-value=0.79 Score=29.11 Aligned_cols=46 Identities=7% Similarity=-0.068 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|+.+++. .-.+..+.++||.+|.. ..++.+|..+|++|.+
T Consensus 36 ~~A~~~~~~al~~-~p~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 36 DAALPHLRAALDF-DPTYSVAWKWLGKTLQG----QGDRAGARQAWESGLA 81 (115)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 4577788743322 33578889999998874 4688899999988865
No 25
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.27 E-value=0.92 Score=28.88 Aligned_cols=31 Identities=16% Similarity=0.059 Sum_probs=19.5
Q ss_pred CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 96 GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 96 GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.++.+.+++|.+|.. ..++++|..+|+++.+
T Consensus 97 ~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 97 GDVKALYRRSQALEK----LGRLDQAVLDLQRCVS 127 (148)
T ss_dssp CCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 456666667666653 3466667777766654
No 26
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=90.19 E-value=0.92 Score=28.21 Aligned_cols=47 Identities=2% Similarity=-0.156 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|+.+++. .-.+..+.+++|.+|.. ..++++|+.+|+++.+.
T Consensus 67 ~~A~~~~~~a~~~-~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 67 QLALKDCEECIQL-EPTFIKGYTRKAAALEA----MKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCCchHHHHHHHHHHHH----HhhHHHHHHHHHHHHHh
Confidence 3566677643322 23467788888887764 35778888888877653
No 27
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=89.96 E-value=0.79 Score=32.25 Aligned_cols=47 Identities=11% Similarity=-0.033 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
.|..+|..+++.....|..+.+++|.+|.. ..|+++|+.+|++|.+.
T Consensus 25 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~ 71 (228)
T 4i17_A 25 VAFEKYSEYLKLTNNQDSVTAYNCGVCADN----IKKYKEAADYFDIAIKK 71 (228)
T ss_dssp HHHHHHHHHHHHTTTCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccCCCCcHHHHHHHHHHHH----hhcHHHHHHHHHHHHHh
Confidence 455666644333333566677777777663 35677777777776654
No 28
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=89.94 E-value=1.5 Score=26.42 Aligned_cols=48 Identities=6% Similarity=-0.302 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|..+++. ...+..+.+++|.+|.. ..++.+|..+|+++.+.+
T Consensus 55 ~~A~~~~~~~~~~-~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~ 102 (118)
T 1elw_A 55 QKAYEDGCKTVDL-KPDWGKGYSRKAAALEF----LNRFEEAKRTYEEGLKHE 102 (118)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHh-CcccHHHHHHHHHHHHH----HhhHHHHHHHHHHHHHcC
Confidence 3566777743322 23578888999998875 358899999999887754
No 29
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=89.75 E-value=0.74 Score=30.21 Aligned_cols=47 Identities=11% Similarity=0.185 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHc------CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKN------GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~------GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..||+.+++.... ..+....+||.+|+. ..|+.+|+..|++|.+
T Consensus 22 ~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~----~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ----QGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH----ccCHHHHHHHHHHHHh
Confidence 3578999987776643 346778899999983 3479999999999875
No 30
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=89.72 E-value=0.88 Score=30.74 Aligned_cols=45 Identities=4% Similarity=-0.244 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.|..+|+.+++. .-.++.+.++||.+|.. ..++++|+.+|++|.+
T Consensus 63 ~A~~~~~~al~~-~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 63 KAAEDAELATVV-DPKYSKAWSRLGLARFD----MADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHH
Confidence 455555532221 22456666666666653 2456666666666544
No 31
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=89.69 E-value=0.72 Score=30.73 Aligned_cols=30 Identities=7% Similarity=-0.016 Sum_probs=15.1
Q ss_pred CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhh
Q 032634 96 GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELP 129 (137)
Q Consensus 96 GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAA 129 (137)
.++.+.++||.+|.. ..++.+|..+|++|.
T Consensus 84 ~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al 113 (142)
T 2xcb_A 84 NEPRFPFHAAECHLQ----LGDLDGAESGFYSAR 113 (142)
T ss_dssp TCTHHHHHHHHHHHH----TTCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH----cCCHHHHHHHHHHHH
Confidence 345555555555542 234555555555543
No 32
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=89.40 E-value=1.3 Score=26.87 Aligned_cols=47 Identities=11% Similarity=0.127 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|..+++. ...+..+.+.||.+|.. ..++++|..+|+++.+.
T Consensus 60 ~~A~~~~~~~~~~-~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 60 DEAIEYYQKALEL-DPNNAEAWYNLGNAYYK----QGDYDEAIEYYQKALEL 106 (125)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCccHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHh
Confidence 3566777742221 23578888888888874 35788889988888664
No 33
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=89.38 E-value=0.069 Score=34.71 Aligned_cols=45 Identities=9% Similarity=0.119 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.|..+|+.+++. .-.++.+.++||.+|.. ..++++|+.+|++|.+
T Consensus 45 ~A~~~~~~al~~-~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~ 89 (117)
T 3k9i_A 45 KAEAVLANGVKQ-FPNHQALRVFYAMVLYN----LGRYEQGVELLLKIIA 89 (117)
T ss_dssp HHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCCchHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 455666532211 22466677777776663 3466677777766654
No 34
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=89.33 E-value=1.1 Score=28.66 Aligned_cols=45 Identities=2% Similarity=-0.120 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.|..+|+.+++. .-.++.+.+++|.+|.. ..++++|+.+|++|.+
T Consensus 56 ~A~~~~~~al~~-~p~~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~ 100 (126)
T 3upv_A 56 EAIADCNKAIEK-DPNFVRAYIRKATAQIA----VKEYASALETLDAART 100 (126)
T ss_dssp HHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCCcHHHHHHHHHHHHH----HhCHHHHHHHHHHHHH
Confidence 455666632221 23467777777777763 2467777777777654
No 35
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=89.27 E-value=0.96 Score=28.52 Aligned_cols=47 Identities=9% Similarity=0.069 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHcCC---HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGD---KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD---~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|+.+++. .-.+ +.+.++||.+|.. ..|+++|..+|+++.+.
T Consensus 56 ~~A~~~~~~~~~~-~p~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 56 QLAEAQFRDLVSR-YPTHDKAAGGLLKLGLSQYG----EGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHHHHHHHHHH-CTTSTTHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCCcccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 4677888843322 1245 8889999999984 46899999999998764
No 36
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=89.22 E-value=0.89 Score=31.68 Aligned_cols=47 Identities=6% Similarity=-0.026 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|..+++. .-.+..+.+++|.+|.. ..++++|+.+|++|.+.
T Consensus 105 ~~A~~~~~~al~~-~p~~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 105 PKAIDHASKVLKI-DKNNVKALYKLGVANMY----FGFLEEAKENLYKAASL 151 (198)
T ss_dssp HHHHHHHHHHHHH-STTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CcccHHHHHHHHHHHHH----cccHHHHHHHHHHHHHH
Confidence 3566778754433 34689999999999984 46899999999999764
No 37
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=89.16 E-value=0.85 Score=30.80 Aligned_cols=48 Identities=8% Similarity=0.022 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++. .-.++.+.++||.+|.. ..++.+|+.+|++|.+.+
T Consensus 28 ~~A~~~~~~al~~-~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~ 75 (164)
T 3sz7_A 28 SKAIDLYTQALSI-APANPIYLSNRAAAYSA----SGQHEKAAEDAELATVVD 75 (164)
T ss_dssp HHHHHHHHHHHHH-STTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh-CCcCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhC
Confidence 4577888843322 24689999999999985 468999999999998654
No 38
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=89.05 E-value=1.2 Score=27.28 Aligned_cols=49 Identities=10% Similarity=0.130 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHc--CC----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKN--GD----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~--GD----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|..++..... ++ ..+.++||.+|.. ..|+.+|..+|+++.+.+
T Consensus 55 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~ 109 (131)
T 1elr_A 55 NKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFK----EEKYKDAIHFYNKSLAEH 109 (131)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhC
Confidence 3567788765554432 22 8899999999985 368999999999998743
No 39
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=88.75 E-value=1 Score=28.78 Aligned_cols=48 Identities=4% Similarity=-0.060 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|..+++. .-.++.+.+++|.+|.. ..++.+|+.+|++|.+.+
T Consensus 21 ~~A~~~~~~al~~-~p~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~ 68 (126)
T 3upv_A 21 PNAVKAYTEMIKR-APEDARGYSNRAAALAK----LMSFPEAIADCNKAIEKD 68 (126)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh-CCCChHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhC
Confidence 4577888843322 33689999999999985 468999999999998754
No 40
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=88.68 E-value=1.2 Score=30.03 Aligned_cols=46 Identities=9% Similarity=-0.005 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
.|..+|..+++. .-.++.+.+++|.+|.. ..++.+|+.+|++|.+.
T Consensus 81 ~A~~~~~~al~~-~p~~~~a~~~~g~~~~~----~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 81 EAEETSSEVLKR-EETNEKALFRRAKARIA----AWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHHHHHHHHHH-STTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-CCcchHHHHHHHHHHHH----HhcHHHHHHHHHHHHhc
Confidence 566777754332 45789999999999984 36999999999998764
No 41
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=88.61 E-value=0.89 Score=30.26 Aligned_cols=48 Identities=17% Similarity=0.078 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.++. ..-.++.+.++||.+|.. ..++++|+.+|++|.+.+
T Consensus 35 ~~A~~~~~~al~-~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 82 (142)
T 2xcb_A 35 DDAQKIFQALCM-LDHYDARYFLGLGACRQS----LGLYEQALQSYSYGALMD 82 (142)
T ss_dssp HHHHHHHHHHHH-HCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-hCCccHHHHHHHHHHHHH----HhhHHHHHHHHHHHHhcC
Confidence 456778874221 233689999999999984 469999999999998754
No 42
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=88.57 E-value=1.4 Score=28.12 Aligned_cols=45 Identities=13% Similarity=0.076 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.|..+|+.+++. .-.++.+.++||.+|.. ..++.+|..+|++|.+
T Consensus 61 ~A~~~~~~al~~-~p~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 61 QALADCRRALEL-DGQSVKAHFFLGQCQLE----MESYDEAIANLQRAYS 105 (137)
T ss_dssp HHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CchhHHHHHHHHHHHHH----HhhHHHHHHHHHHHHH
Confidence 455666643332 23577788888887764 2577788888877764
No 43
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=88.29 E-value=1.6 Score=26.39 Aligned_cols=48 Identities=13% Similarity=0.157 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|..+++. ...+..+.+.+|.+|.. ..++++|..+|+++.+.+
T Consensus 26 ~~A~~~~~~~~~~-~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~ 73 (125)
T 1na0_A 26 DEAIEYYQKALEL-DPNNAEAWYNLGNAYYK----QGDYDEAIEYYQKALELD 73 (125)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH-CcCcHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhC
Confidence 3567888743332 23688999999999985 368999999999997653
No 44
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=88.28 E-value=1.4 Score=30.22 Aligned_cols=48 Identities=13% Similarity=0.100 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|..+++. ...++.+.+++|.+|.. ..++++|+.+|++|.+..
T Consensus 54 ~~A~~~~~~al~~-~~~~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 54 TEAEKAFTRSINR-DKHLAVAYFQRGMLYYQ----TEKYDLAIKDLKEALIQL 101 (213)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHh-CccchHHHHHHHHHHHH----cccHHHHHHHHHHHHHhC
Confidence 4577888743332 34789999999999985 468999999999998743
No 45
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=87.96 E-value=1.1 Score=29.89 Aligned_cols=48 Identities=6% Similarity=0.044 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++ ..-.++.+.+++|.+|.. ..++.+|+.+|++|.+.+
T Consensus 30 ~~A~~~~~~al~-~~p~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~ 77 (126)
T 4gco_A 30 PTAMRHYNEAVK-RDPENAILYSNRAACLTK----LMEFQRALDDCDTCIRLD 77 (126)
T ss_dssp HHHHHHHHHHHH-HCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-hCCCCHHHHHHHhhHHHh----hccHHHHHHHHHHHHHhh
Confidence 467788884332 234689999999999984 468999999999998754
No 46
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=87.89 E-value=1.3 Score=31.45 Aligned_cols=47 Identities=6% Similarity=-0.111 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|+.++. ..-.++.+.++||.+|.. ..++++|+.+|++|.+.
T Consensus 53 ~eA~~~~~~al~-~~P~~~~~~~~lg~~~~~----~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 53 EEAEVFFRFLCI-YDFYNVDYIMGLAAIYQI----KEQFQQAADLYAVAFAL 99 (151)
T ss_dssp HHHHHHHHHHHH-HCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hCCCCHHHHHHHHHHHHH----HccHHHHHHHHHHHHhh
Confidence 356667763221 123577788888887763 35777888888777654
No 47
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=87.86 E-value=1.5 Score=28.21 Aligned_cols=45 Identities=4% Similarity=-0.017 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHc-----CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 81 CVQRWFQDTLREAKN-----GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~-----GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
.|..+|+ ++.+. .++.+.++||.+|.. ..++++|+.+|++|.+.+
T Consensus 8 ~A~~~~~---~al~~~~~~p~~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~~~ 57 (117)
T 3k9i_A 8 QAVPYYE---KAIASGLQGKDLAECYLGLGSTFRT----LGEYRKAEAVLANGVKQF 57 (117)
T ss_dssp CCHHHHH---HHHSSCCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHH---HHHHcCCCCccHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 4678888 45555 467899999999984 468999999999998754
No 48
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=87.74 E-value=0.98 Score=30.98 Aligned_cols=46 Identities=9% Similarity=-0.041 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|+.++.. .-.++.+.++||.+|.. ..++++|..+|++|.+
T Consensus 72 ~~A~~~~~~al~l-~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~ 117 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-DIXEPRFPFHAAECLLQ----XGELAEAESGLFLAQE 117 (148)
T ss_dssp HHHHHHHHHHHHH-STTCTHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-CCCCchHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 3455666632211 23566777777777662 3566777777777654
No 49
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=87.65 E-value=1.8 Score=25.84 Aligned_cols=49 Identities=2% Similarity=-0.098 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHcC--CHHHHHHHHHHhhcCCCcc-ccHHHHHHHHHHhhcCCC
Q 032634 80 DCVQRWFQDTLREAKNG--DKAMEVLVGQMYLSGYGVA-EMKKRGMLGLRELPQVDL 133 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~G--D~~AQ~~LG~MY~~G~GV~-qD~~KA~~Wf~KAAeqg~ 133 (137)
+.|..+|+.+++. .-. +..+.++||.+|.. . .++++|..+|+++.+.+-
T Consensus 57 ~~A~~~~~~a~~~-~~~~~~~~~~~~l~~~~~~----~~~~~~~A~~~~~~~~~~~p 108 (112)
T 2kck_A 57 EEAVDCYNYVINV-IEDEYNKDVWAAKADALRY----IEGKEVEAEIAEARAKLEHH 108 (112)
T ss_dssp HHHHHHHHHHHHT-SCCTTCHHHHHHHHHHHTT----CSSCSHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHh-CcccchHHHHHHHHHHHHH----HhCCHHHHHHHHHHHhhccc
Confidence 4677888843322 224 78999999999984 4 688999999999987653
No 50
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=87.63 E-value=1.8 Score=26.36 Aligned_cols=47 Identities=4% Similarity=-0.109 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|..+++. .-.++.+.+.+|.+|.. ..++.+|..+|+++.+.
T Consensus 63 ~~A~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCERAICI-DPAYSKAYGRMGLALSS----LNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-CccCHHHHHHHHHHHHH----hCCHHHHHHHHHHHHhc
Confidence 3566677643322 33568888888888874 35788888888888764
No 51
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=87.48 E-value=1.3 Score=29.28 Aligned_cols=48 Identities=10% Similarity=0.052 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|...|+.+++ ..-.++.+.++||.+|.. ..++.+|+..|++|.+.+
T Consensus 34 ~~A~~~~~~al~-~~P~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~l~ 81 (121)
T 1hxi_A 34 AEAALAFEAVCQ-KEPEREEAWRSLGLTQAE----NEKDGLAIIALNHARMLD 81 (121)
T ss_dssp HHHHHHHHHHHH-HSTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-HCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 356667763222 223578888888888874 357788888888876643
No 52
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=87.18 E-value=1.8 Score=29.18 Aligned_cols=48 Identities=4% Similarity=0.020 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++. .-.+..+.++||.+|.. ..++++|..+|++|.+.+
T Consensus 98 ~~A~~~~~~al~~-~p~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~ 145 (177)
T 2e2e_A 98 AQTRAMIDKALAL-DSNEITALMLLASDAFM----QANYAQAIELWQKVMDLN 145 (177)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHh-CCCcHHHHHHHHHHHHH----cccHHHHHHHHHHHHhhC
Confidence 4566666632221 23567777777777764 357777777777776543
No 53
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=87.15 E-value=1.8 Score=28.05 Aligned_cols=47 Identities=2% Similarity=-0.161 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|..+++. ...++.+.+++|.+|.. ..++.+|..+|++|.+.
T Consensus 64 ~~A~~~~~~a~~~-~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 64 GYALGDATRAIEL-DKKYIKGYYRRAASNMA----LGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CcccHHHHHHHHHHHHH----hccHHHHHHHHHHHHHh
Confidence 3566777643322 23577888888888774 24788888888887654
No 54
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=86.95 E-value=2 Score=28.47 Aligned_cols=47 Identities=2% Similarity=-0.014 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHcCC------HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKNGD------KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD------~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|..+++....-. ..+.++||..|.. ..|+.+|+++|++|.+
T Consensus 59 ~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~----~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 59 AECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQK----QNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHh
Confidence 457778875544433211 3588889998873 4799999999999975
No 55
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=86.86 E-value=2.2 Score=26.40 Aligned_cols=46 Identities=11% Similarity=0.062 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHc--CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKN--GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~--GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+. +.+. .+..+.+++|.+|.. ..++++|+.+|++|.+.+
T Consensus 33 ~~A~~~~~~---al~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~ 80 (133)
T 2lni_A 33 PQAMKHYTE---AIKRNPKDAKLYSNRAACYTK----LLEFQLALKDCEECIQLE 80 (133)
T ss_dssp HHHHHHHHH---HHTTCTTCHHHHHHHHHHHTT----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHcCCCcHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhC
Confidence 356778873 4443 589999999999974 468999999999998753
No 56
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=86.45 E-value=2.1 Score=25.72 Aligned_cols=48 Identities=4% Similarity=0.037 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|..++. ....++.+.+++|.+|.. ..|+.+|..+|+++.+.+
T Consensus 21 ~~A~~~~~~~~~-~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~ 68 (118)
T 1elw_A 21 DDALQCYSEAIK-LDPHNHVLYSNRSAAYAK----KGDYQKAYEDGCKTVDLK 68 (118)
T ss_dssp HHHHHHHHHHHH-HCTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-HCCCcHHHHHHHHHHHHh----hccHHHHHHHHHHHHHhC
Confidence 456778874322 233689999999999985 478999999999997654
No 57
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=86.44 E-value=0.66 Score=29.57 Aligned_cols=34 Identities=21% Similarity=0.187 Sum_probs=28.7
Q ss_pred cCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 95 NGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 95 ~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
-.|+.+.++||.+|.. ..++++|+.+|++|.+.+
T Consensus 4 p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 37 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLK----HDNASRALALFEELVETD 37 (100)
T ss_dssp -CCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHS
T ss_pred ccCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 3578899999999985 469999999999998754
No 58
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=86.28 E-value=2.1 Score=26.23 Aligned_cols=47 Identities=6% Similarity=-0.002 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|..+++. ...++.+.+++|.+|.. ..++.+|..+|+++.+.
T Consensus 21 ~~A~~~~~~a~~~-~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~ 67 (131)
T 1elr_A 21 DTALKHYDKAKEL-DPTNMTYITNQAAVYFE----KGDYNKCRELCEKAIEV 67 (131)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-CCccHHHHHHHHHHHHH----hccHHHHHHHHHHHHhh
Confidence 4577788743322 23588999999999984 46899999999998764
No 59
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=86.24 E-value=2.6 Score=26.44 Aligned_cols=47 Identities=13% Similarity=0.121 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHc-CC----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKN-GD----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~-GD----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|+.++..++. ++ ..+.++||.+|.. ..++++|..+|++|.+
T Consensus 66 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~ 117 (164)
T 3ro3_A 66 ETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL----LQDYEKAIDYHLKHLA 117 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH----HhhHHHHHHHHHHHHH
Confidence 3566777766666554 44 5677888888874 4678888888888764
No 60
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=86.22 E-value=1.4 Score=28.03 Aligned_cols=48 Identities=8% Similarity=0.064 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|..++.. .-.++.+.++||.+|.. ..++.+|+.+|++|.+.+
T Consensus 26 ~~A~~~~~~al~~-~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~ 73 (137)
T 3q49_B 26 PEAAACYGRAITR-NPLVAVYYTNRALCYLK----MQQPEQALADCRRALELD 73 (137)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhh-CcCcHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhC
Confidence 3566778743322 23578999999999984 578999999999998754
No 61
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=85.84 E-value=1.3 Score=31.56 Aligned_cols=48 Identities=10% Similarity=0.159 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++ ..-.++.+.++||.+|.. ..++++|+.+|++|.+.+
T Consensus 71 ~~A~~~~~~al~-~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 118 (208)
T 3urz_A 71 DKAYLFYKELLQ-KAPNNVDCLEACAEMQVC----RGQEKDALRMYEKILQLE 118 (208)
T ss_dssp HHHHHHHHHHHH-HCTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-HCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcC
Confidence 467788884222 123689999999999984 468999999999997643
No 62
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=85.70 E-value=1.6 Score=29.29 Aligned_cols=49 Identities=12% Similarity=0.087 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHH-----------------HcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREA-----------------KNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAA-----------------e~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|..++... ...+..+.++||.+|.. ..++.+|+.+|++|.+.+
T Consensus 28 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~----~~~~~~A~~~~~~al~~~ 93 (162)
T 3rkv_A 28 KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN----IGDLHEAEETSSEVLKRE 93 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHHhcC
Confidence 35677888655552 44567899999999984 468999999999998754
No 63
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=85.45 E-value=1.7 Score=27.49 Aligned_cols=44 Identities=14% Similarity=0.221 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHH--cCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 82 VQRWFQDTLREAK--NGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 82 A~~WF~~~lkAAe--~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+..+|+. +.+ -.++.+.++||.+|.. ..++.+|+.+|++|.+.+
T Consensus 4 a~~~~~~---al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 49 (115)
T 2kat_A 4 ITERLEA---MLAQGTDNMLLRFTLGKTYAE----HEQFDAALPHLRAALDFD 49 (115)
T ss_dssp HHHHHHH---HHTTTCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHH---HHHhCCCcHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHHC
Confidence 4566763 433 3689999999999985 368999999999998654
No 64
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=85.43 E-value=1.8 Score=28.64 Aligned_cols=46 Identities=9% Similarity=-0.034 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHc--CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKN--GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~--GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|...|+. +.+. .++.+.++||.+|.. ..++.+|+.+|+++.+.+
T Consensus 68 ~~A~~~~~~---al~l~P~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 68 GLAIIALNH---ARMLDPKDIAVHAALAVSHTN----EHNANAALASLRAWLLSQ 115 (121)
T ss_dssp HHHHHHHHH---HHHHCTTCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHH---HHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 456777873 4443 689999999999984 468999999999998754
No 65
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=85.33 E-value=1.3 Score=31.34 Aligned_cols=47 Identities=11% Similarity=0.010 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|+.+++ ..-.++.+.++||.+|.. ..++++|..+|++|.+.
T Consensus 87 ~~Ai~~~~~al~-l~P~~~~~~~~lg~~~~~----lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 87 QQAADLYAVAFA-LGKNDYTPVFHTGQCQLR----LKAPLKAKECFELVIQH 133 (151)
T ss_dssp HHHHHHHHHHHH-HSSSCCHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hCCCCcHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 467788884222 234789999999999984 46899999999999764
No 66
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.10 E-value=2.6 Score=26.69 Aligned_cols=45 Identities=4% Similarity=-0.116 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHcC-C----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNG-D----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~G-D----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|+ ++.+.. + ..+.+++|.+|.. ..++.+|+.+|+++.+.
T Consensus 45 ~~A~~~~~---~a~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 45 GGALAAYT---QALGLDATPQDQAVLHRNRAACHLK----LEDYDKAETEASKAIEK 94 (148)
T ss_dssp HHHHHHHH---HHHTSCCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHHcccchHHHHHHHHHHHHHHH----HccHHHHHHHHHHHHhh
Confidence 35678887 344443 3 7899999999975 46999999999998764
No 67
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=84.83 E-value=3.7 Score=24.78 Aligned_cols=30 Identities=7% Similarity=-0.006 Sum_probs=14.3
Q ss_pred CHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 97 DKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 97 D~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+..+.+.+|.+|.. ..++++|..+|+++.+
T Consensus 68 ~~~~~~~l~~~~~~----~~~~~~A~~~~~~~~~ 97 (136)
T 2fo7_A 68 SAEAWYNLGNAYYK----QGDYDEAIEYYQKALE 97 (136)
T ss_dssp CHHHHHHHHHHHHT----TTCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH----hcCHHHHHHHHHHHHH
Confidence 44455555555442 2345555555555443
No 68
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=84.66 E-value=3 Score=26.95 Aligned_cols=48 Identities=8% Similarity=0.104 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|..+++ ....+..+.+++|.+|.. ..++.+|+.+|++|.+.+
T Consensus 30 ~~A~~~~~~al~-~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~a~~~~ 77 (166)
T 1a17_A 30 ENAIKFYSQAIE-LNPSNAIYYGNRSLAYLR----TECYGYALGDATRAIELD 77 (166)
T ss_dssp HHHHHHHHHHHH-HSTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-hCCCChHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 356677874332 233589999999999985 468999999999998654
No 69
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=84.46 E-value=1.8 Score=29.92 Aligned_cols=45 Identities=7% Similarity=-0.051 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|..+++.. .++.+.+.+|.+|.. ..++++|..+|++|.+
T Consensus 22 ~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~ 66 (258)
T 3uq3_A 22 DEAIEHYNKAWELH--KDITYLNNRAAAEYE----KGEYETAISTLNDAVE 66 (258)
T ss_dssp HHHHHHHHHHHHHS--CCTHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh--ccHHHHHHHHHHHHH----cccHHHHHHHHHHHHH
Confidence 46778888766665 899999999999985 3689999999999876
No 70
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=84.31 E-value=1.8 Score=27.22 Aligned_cols=47 Identities=17% Similarity=0.032 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHc-CCH----HHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKN-GDK----AMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~-GD~----~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|..+++.+.. +|. .+.++||.+|.. ..++.+|..+|++|.+
T Consensus 26 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~ 77 (164)
T 3ro3_A 26 RDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIF----LGEFETASEYYKKTLL 77 (164)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 4577788876666654 553 588899999985 4689999999999865
No 71
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=84.24 E-value=3.6 Score=24.99 Aligned_cols=47 Identities=2% Similarity=-0.002 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|..++.. ...++.+.+++|.+|.. ..++.+|..+|+++.+.
T Consensus 29 ~~A~~~~~~~~~~-~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~ 75 (131)
T 2vyi_A 29 EAAVHFYGKAIEL-NPANAVYFCNRAAAYSK----LGNYAGAVQDCERAICI 75 (131)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCCCHHHHHHHHHHHHH----hhchHHHHHHHHHHHhc
Confidence 3566777743322 33588999999999985 46899999999999764
No 72
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=84.03 E-value=2 Score=29.38 Aligned_cols=48 Identities=10% Similarity=-0.022 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.++ ...-.++.+.++||.+|.. ..++++|+.+|++|.+.+
T Consensus 38 ~~A~~~~~~al-~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~l~ 85 (148)
T 2vgx_A 38 EDAHXVFQALC-VLDHYDSRFFLGLGACRQA----MGQYDLAIHSYSYGAVMD 85 (148)
T ss_dssp HHHHHHHHHHH-HHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHH-HcCcccHHHHHHHHHHHHH----HhhHHHHHHHHHHHHhcC
Confidence 35677887422 1234699999999999984 468999999999998653
No 73
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=83.91 E-value=0.69 Score=32.80 Aligned_cols=46 Identities=7% Similarity=0.016 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
.|..+|..+++ ..-.++.+..+||.+|.. ..|+++|+.+|++|.+.
T Consensus 92 ~A~~~~~~a~~-~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~ 137 (272)
T 3u4t_A 92 LAIQQYQAAVD-RDTTRLDMYGQIGSYFYN----KGNFPLAIQYMEKQIRP 137 (272)
T ss_dssp HHHHHHHHHHH-HSTTCTHHHHHHHHHHHH----TTCHHHHHHHHGGGCCS
T ss_pred HHHHHHHHHHh-cCcccHHHHHHHHHHHHH----ccCHHHHHHHHHHHhhc
Confidence 45555553222 112355566666666553 24556666666655543
No 74
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=83.73 E-value=2 Score=26.96 Aligned_cols=48 Identities=15% Similarity=0.098 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHcCCH---HHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDK---AMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~---~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|...|..+++. .-++. .+.+++|.+|.. ..|+.+|+.+|+++.+.+
T Consensus 19 ~~A~~~~~~~~~~-~p~~~~~~~~~~~lg~~~~~----~~~~~~A~~~~~~~~~~~ 69 (129)
T 2xev_A 19 DDASQLFLSFLEL-YPNGVYTPNALYWLGESYYA----TRNFQLAEAQFRDLVSRY 69 (129)
T ss_dssp HHHHHHHHHHHHH-CSSSTTHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH-CCCCcccHHHHHHHHHHHHH----hccHHHHHHHHHHHHHHC
Confidence 3566777743222 12455 799999999985 478999999999997643
No 75
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=83.63 E-value=1.4 Score=36.15 Aligned_cols=49 Identities=6% Similarity=0.104 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHc--CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKN--GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~--GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++.... .++.+.++||.+|.. ..++++|..+|++|.+.+
T Consensus 238 ~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~l~ 288 (474)
T 4abn_A 238 QQALSAYAQAEKVDRKASSNPDLHLNRATLHKY----EESYGEALEGFSQAAALD 288 (474)
T ss_dssp HHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 5677888854443221 799999999999985 469999999999997643
No 76
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=83.55 E-value=2 Score=32.49 Aligned_cols=45 Identities=7% Similarity=-0.000 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHH-HcCCH----HHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREA-KNGDK----AMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAA-e~GD~----~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.|..+|+.++... +.||. .+..+||.+|.. .|+++|+.+|++|.+
T Consensus 94 ~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-----g~~~~A~~~~~~Al~ 143 (307)
T 2ifu_A 94 EAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-----LDLSKAVHLYQQAAA 143 (307)
T ss_dssp GGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-----TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHH
Confidence 4667777665554 34654 577899999975 589999999999875
No 77
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=83.52 E-value=1.7 Score=30.26 Aligned_cols=48 Identities=10% Similarity=-0.017 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHH-------cCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAK-------NGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe-------~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|..+++.++ .....+.++||.+|.. ..++.+|..+|++|.+.
T Consensus 60 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 114 (283)
T 3edt_B 60 KEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK----RGKYKEAEPLCKRALEI 114 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHH
Confidence 467788887666652 2356789999999984 46899999999998753
No 78
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=83.22 E-value=3.8 Score=24.73 Aligned_cols=48 Identities=13% Similarity=0.135 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|..+++. ...+..+.+.+|.+|.. ..++.+|..+|+++.+.+
T Consensus 18 ~~A~~~~~~~~~~-~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~ 65 (136)
T 2fo7_A 18 DEAIEYYQKALEL-DPRSAEAWYNLGNAYYK----QGDYDEAIEYYQKALELD 65 (136)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHc-CCcchhHHHHHHHHHHH----hcCHHHHHHHHHHHHHHC
Confidence 4567788743322 34688999999999875 358999999999987643
No 79
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=82.94 E-value=3.9 Score=28.55 Aligned_cols=31 Identities=13% Similarity=0.044 Sum_probs=18.0
Q ss_pred CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 96 GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 96 GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.+..+.++||.+|.. ..++++|..+|+++.+
T Consensus 103 ~~~~~~~~la~~~~~----~g~~~~A~~~~~~~~~ 133 (252)
T 2ho1_A 103 RNARVLNNYGGFLYE----QKRYEEAYQRLLEASQ 133 (252)
T ss_dssp TCHHHHHHHHHHHHH----TTCHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHH----HhHHHHHHHHHHHHHh
Confidence 355666666666553 3456666666666655
No 80
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=82.62 E-value=2.7 Score=34.41 Aligned_cols=48 Identities=4% Similarity=-0.091 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++. .-.++.+.++||.+|.. ..|+++|..+|++|.+.+
T Consensus 120 ~~A~~~~~~al~~-~p~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 167 (474)
T 4abn_A 120 PEAEVLLSKAVKL-EPELVEAWNQLGEVYWK----KGDVTSAHTCFSGALTHC 167 (474)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhh-CCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhC
Confidence 5677888753332 34678899999998884 468899999999987764
No 81
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=82.20 E-value=3.7 Score=27.58 Aligned_cols=48 Identities=15% Similarity=0.333 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++. .-.++.+.+.||.+|.. ..++++|..+|.++....
T Consensus 22 ~~A~~~~~~al~~-~p~~~~~~~~la~~~~~----~~~~~~a~~~~~~~~~~~ 69 (184)
T 3vtx_A 22 DGAIRAYKKVLKA-DPNNVETLLKLGKTYMD----IGLPNDAIESLKKFVVLD 69 (184)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh-CCCCHHHHHHHHHHHHH----CCCHHHHHHHHHHHHhcC
Confidence 4677888853332 33689999999999885 357888999998886543
No 82
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=81.89 E-value=3.4 Score=30.67 Aligned_cols=47 Identities=2% Similarity=-0.173 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHcC-C----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAKNG-D----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~G-D----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.|..+|+.+++.+..- + +.+.+++|.+|.. ..+++++|.++|++|.+
T Consensus 214 ~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~---~g~~~~~A~~~~~~Al~ 265 (293)
T 3u3w_A 214 ESLYQVNKAIEISCRINSMALIGQLYYQRGECLRK---LEYEEAEIEDAYKKASF 265 (293)
T ss_dssp HHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH---hCCcHHHHHHHHHHHHH
Confidence 5778888777766543 2 7899999999983 22467899999999864
No 83
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=81.88 E-value=1.5 Score=31.08 Aligned_cols=47 Identities=9% Similarity=0.200 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHc-CC------HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 82 VQRWFQDTLREAKN-GD------KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 82 A~~WF~~~lkAAe~-GD------~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
|...|+.+++..+. ++ ..+.+.||.+|.. ..|+++|+.+|++|.+.+
T Consensus 198 A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~ 251 (272)
T 3u4t_A 198 AKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTI----NRDKVKADAAWKNILALD 251 (272)
T ss_dssp THHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcC
Confidence 56677765555533 22 3688999999985 489999999999998654
No 84
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=81.58 E-value=4.5 Score=29.12 Aligned_cols=48 Identities=13% Similarity=0.077 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++. .-.++.+.+++|.+|.. ..|+++|..+|++|.+.+
T Consensus 289 ~~A~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~g~~~~A~~~~~~a~~~~ 336 (359)
T 3ieg_A 289 VEAIRICSEVLQM-EPDNVNALKDRAEAYLI----EEMYDEAIQDYEAAQEHN 336 (359)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHh-CcccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcC
Confidence 4577888753332 34689999999999984 568999999999998764
No 85
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=81.55 E-value=3 Score=29.88 Aligned_cols=48 Identities=10% Similarity=0.169 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|...|+.+++ ..-.++.+.++||.+|.. ..++++|+.+|++|.+.+
T Consensus 101 ~~A~~~~~~al~-~~P~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 148 (217)
T 2pl2_A 101 EQALSVLKDAER-VNPRYAPLHLQRGLVYAL----LGERDKAEASLKQALALE 148 (217)
T ss_dssp HHHHHHHHHHHH-HCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-hCcccHHHHHHHHHHHHH----cCChHHHHHHHHHHHhcc
Confidence 467778874222 134689999999999984 468999999999998754
No 86
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=81.30 E-value=2.3 Score=29.56 Aligned_cols=48 Identities=4% Similarity=-0.096 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHH-------cCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAK-------NGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe-------~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|..++..++ .....+.++||.+|.. ..++++|..+|++|.+.
T Consensus 102 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 102 KEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN----QGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 457788886555542 2357789999999984 36899999999998764
No 87
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=81.14 E-value=4 Score=30.57 Aligned_cols=48 Identities=4% Similarity=0.031 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHH-cCC----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAK-NGD----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe-~GD----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|+.+++... .|| +.+..+||.+|..- -.++++|+.+|++|.+
T Consensus 94 ~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~---lg~~~~A~~~~~~Al~ 146 (292)
T 1qqe_A 94 VNAVDSLENAIQIFTHRGQFRRGANFKFELGEILEND---LHDYAKAIDCYELAGE 146 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh---hcCHHHHHHHHHHHHH
Confidence 457778876655543 366 45889999999851 1478999999999875
No 88
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=80.79 E-value=4.8 Score=27.68 Aligned_cols=48 Identities=8% Similarity=0.049 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHcCC------HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGD------KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD------~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|..++....... +.+.+.||.+|.. ..++.+|+.+|+++.+.
T Consensus 55 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~ 108 (258)
T 3uq3_A 55 ETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHK----LGDLKKTIEYYQKSLTE 108 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHH----cccHHHHHHHHHHHHhc
Confidence 457778876555444332 7899999999984 46999999999999763
No 89
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=80.79 E-value=2.9 Score=31.08 Aligned_cols=46 Identities=4% Similarity=0.063 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHc--CC----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAKN--GD----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~--GD----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.|..+|+.+++.++. ++ ..+.+++|.+|. -..++++|..+|++|.+
T Consensus 173 ~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~----~~~~y~~Al~~~~kal~ 224 (293)
T 2qfc_A 173 KGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY----LDSRYEESLYQVNKAIE 224 (293)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH----HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHH----HHhhHHHHHHHHHHHHH
Confidence 677888876655443 22 268999999998 45899999999999864
No 90
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=80.78 E-value=3.8 Score=32.01 Aligned_cols=47 Identities=9% Similarity=-0.045 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
.|..+|..+++. .-.++.+.+++|.+|.. ..++.+|+.+|++|.+.+
T Consensus 248 ~A~~~~~~al~~-~p~~~~a~~~lg~a~~~----~g~~~~A~~~l~~al~l~ 294 (338)
T 2if4_A 248 EAIGHCNIVLTE-EEKNPKALFRRGKAKAE----LGQMDSARDDFRKAQKYA 294 (338)
T ss_dssp HHHHHHHHHHHH-CTTCHHHHHHHHHHHHT----TTCHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHh-CCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHC
Confidence 455667643322 34689999999999984 468999999999997653
No 91
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=80.69 E-value=5 Score=25.85 Aligned_cols=29 Identities=3% Similarity=-0.073 Sum_probs=13.0
Q ss_pred CHHHHHHHHHHhhcCCCccccHHHHHHHHHHhh
Q 032634 97 DKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELP 129 (137)
Q Consensus 97 D~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAA 129 (137)
+..+.+.+|.+|.. ..++++|..+|+++.
T Consensus 109 ~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~ 137 (186)
T 3as5_A 109 NFNVRFRLGVALDN----LGRFDEAIDSFKIAL 137 (186)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH----cCcHHHHHHHHHHHH
Confidence 44444444444442 234444444444443
No 92
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=80.39 E-value=5.4 Score=25.68 Aligned_cols=29 Identities=3% Similarity=0.085 Sum_probs=13.7
Q ss_pred CHHHHHHHHHHhhcCCCccccHHHHHHHHHHhh
Q 032634 97 DKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELP 129 (137)
Q Consensus 97 D~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAA 129 (137)
++.+.+.||.+|.. ..|+++|..+|+++.
T Consensus 143 ~~~~~~~la~~~~~----~~~~~~A~~~~~~~~ 171 (186)
T 3as5_A 143 EGKVHRAIAFSYEQ----MGRHEEALPHFKKAN 171 (186)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH----cCCHHHHHHHHHHHH
Confidence 44455555555442 234555555555443
No 93
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=80.12 E-value=3.7 Score=28.75 Aligned_cols=29 Identities=10% Similarity=-0.110 Sum_probs=13.9
Q ss_pred CHHHHHHHHHHhhcCCCccccHHHHHHHHHHhh
Q 032634 97 DKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELP 129 (137)
Q Consensus 97 D~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAA 129 (137)
+..+.++||.+|.. ..++.+|+.+|+++.
T Consensus 110 ~~~~~~~la~~~~~----~g~~~~A~~~~~~a~ 138 (275)
T 1xnf_A 110 YNYAHLNRGIALYY----GGRDKLAQDDLLAFY 138 (275)
T ss_dssp CTHHHHHHHHHHHH----TTCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHH----hccHHHHHHHHHHHH
Confidence 44455555555443 234455555555544
No 94
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=80.03 E-value=3.6 Score=32.02 Aligned_cols=47 Identities=9% Similarity=-0.001 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
.|..+|+.+++. .-.++.+.+++|.+|.. ..++++|+.+|++|.+.+
T Consensus 214 ~A~~~~~~al~~-~p~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~l~ 260 (336)
T 1p5q_A 214 AAIESCNKALEL-DSNNEKGLSRRGEAHLA----VNDFELARADFQKVLQLY 260 (336)
T ss_dssp HHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh-CCCcHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHC
Confidence 566777743332 34689999999999985 368999999999997643
No 95
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=79.92 E-value=0.84 Score=31.20 Aligned_cols=46 Identities=9% Similarity=0.001 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHc--CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKN--GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~--GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.+...|+ ++... .++.+.++||.+|+. ..|+++|+.+|++|.+.+
T Consensus 14 e~ai~~~~---~a~~~~p~~~~~~~~la~~y~~----~~~~~~A~~~~~~al~~~ 61 (150)
T 4ga2_A 14 ERYIASVQ---GSTPSPRQKSIKGFYFAKLYYE----AKEYDLAKKYICTYINVQ 61 (150)
T ss_dssp HHHHHHHH---HHSCSHHHHHTTHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HhcccCcccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 45667776 33333 245577999999985 479999999999998754
No 96
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=79.76 E-value=3.5 Score=28.56 Aligned_cols=29 Identities=3% Similarity=0.067 Sum_probs=25.2
Q ss_pred HHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 99 AMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 99 ~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
.+.++||.+|.. ..++.+|+.+|++|.+.
T Consensus 89 ~~~~~la~~~~~----~~~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 89 SCNLNLATCYNK----NKDYPKAIDHASKVLKI 117 (198)
T ss_dssp HHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----hcCHHHHHHHHHHHHHh
Confidence 899999999984 46899999999999764
No 97
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=79.59 E-value=0.64 Score=36.06 Aligned_cols=35 Identities=6% Similarity=-0.122 Sum_probs=16.7
Q ss_pred cCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCCC
Q 032634 95 NGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVDL 133 (137)
Q Consensus 95 ~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg~ 133 (137)
-.|+.+.++||.+|.. ..|+++|+++|++|.+.|.
T Consensus 427 p~~~~~~~~LG~~~~~----~g~~~~A~~~y~kALe~~~ 461 (472)
T 4g1t_A 427 GADSEALHVLAFLQEL----NEKMQQADEDSERGLESGS 461 (472)
T ss_dssp C-CTTHHHHHHHHHHH----HHHCC--------------
T ss_pred CCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCC
Confidence 3678899999999984 4689999999999998764
No 98
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=79.58 E-value=1.6 Score=25.66 Aligned_cols=32 Identities=9% Similarity=0.062 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 97 DKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 97 D~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
++.+.+.+|.+|.. ..++.+|..||++|.+.+
T Consensus 8 ~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~ 39 (91)
T 1na3_A 8 SAEAWYNLGNAYYK----QGDYDEAIEYYQKALELD 39 (91)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHH----ccCHHHHHHHHHHHHhcC
Confidence 45688899999884 469999999999997653
No 99
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=79.54 E-value=4.9 Score=28.13 Aligned_cols=47 Identities=11% Similarity=0.053 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
.|..+|+.+++. .-.++.+.++||.+|.. ..++++|+.+|++|.+.+
T Consensus 61 ~A~~~~~~al~~-~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~ 107 (275)
T 1xnf_A 61 LARNDFSQALAI-RPDMPEVFNYLGIYLTQ----AGNFDAAYEAFDSVLELD 107 (275)
T ss_dssp HHHHHHHHHHHH-CCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHc-CCCcHHHHHHHHHHHHH----ccCHHHHHHHHHHHHhcC
Confidence 566777742221 23578899999999874 468999999999987643
No 100
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=78.20 E-value=2.8 Score=33.64 Aligned_cols=46 Identities=7% Similarity=0.022 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
.|..+|+.+++. .-.++.+.+++|.+|.. ..++++|+.+|++|.+.
T Consensus 291 ~A~~~~~~al~~-~p~~~~a~~~lg~~~~~----~g~~~eA~~~l~~Al~l 336 (370)
T 1ihg_A 291 GAVDSCLEALEI-DPSNTKALYRRAQGWQG----LKEYDQALADLKKAQEI 336 (370)
T ss_dssp HHHHHHHHHHTT-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CchhHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHh
Confidence 455666632221 23688999999999984 36899999999999764
No 101
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=78.09 E-value=4.3 Score=29.19 Aligned_cols=45 Identities=9% Similarity=0.104 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHc--CC---HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKN--GD---KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~--GD---~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|+ ++.+. ++ +.+.++||.+|+. ..|+.+|+.+|+++.+.
T Consensus 32 ~~A~~~~~---~~l~~~p~~~~~~~a~~~lg~~~~~----~~~~~~A~~~~~~~l~~ 81 (261)
T 3qky_A 32 DRAIEYFK---AVFTYGRTHEWAADAQFYLARAYYQ----NKEYLLAASEYERFIQI 81 (261)
T ss_dssp HHHHHHHH---HHGGGCSCSTTHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHhCCCCcchHHHHHHHHHHHHH----hCcHHHHHHHHHHHHHH
Confidence 45778887 34443 45 8899999999985 47999999999999874
No 102
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=77.53 E-value=4.6 Score=31.46 Aligned_cols=31 Identities=10% Similarity=0.021 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 98 KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 98 ~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
..+.++||.+|.. ..++.+|+.+|++|.+.+
T Consensus 196 ~~~~~nla~~~~~----~g~~~~A~~~~~~al~~~ 226 (336)
T 1p5q_A 196 LASHLNLAMCHLK----LQAFSAAIESCNKALELD 226 (336)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 6899999999985 469999999999998754
No 103
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=76.87 E-value=5.7 Score=32.47 Aligned_cols=47 Identities=9% Similarity=-0.006 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
.|..+|..+++. .-.++.|.+++|.+|.. ..++++|+.+|++|.+.+
T Consensus 335 ~A~~~~~~al~~-~p~~~~a~~~~g~a~~~----~g~~~~A~~~~~~al~l~ 381 (457)
T 1kt0_A 335 KAVECCDKALGL-DSANEKGLYRRGEAQLL----MNEFESAKGDFEKVLEVN 381 (457)
T ss_dssp HHHHHHHHHHHH-STTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhc-CCccHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhC
Confidence 455666643332 24689999999999985 369999999999998754
No 104
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=76.61 E-value=7.5 Score=25.99 Aligned_cols=47 Identities=15% Similarity=0.019 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHc-C-C----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKN-G-D----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~-G-D----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|..++..++. | + ..+.++||.+|.. ..|+++|..+|++|.+
T Consensus 83 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~ 135 (203)
T 3gw4_A 83 DAARRCFLEERELLASLPEDPLAASANAYEVATVALH----FGDLAGARQEYEKSLV 135 (203)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHH
Confidence 3567788866666553 4 3 3568889999874 3589999999999864
No 105
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=76.41 E-value=5.5 Score=28.08 Aligned_cols=48 Identities=13% Similarity=0.074 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHc-CC----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 81 CVQRWFQDTLREAKN-GD----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~-GD----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
.|..+|+.++..+.. ++ ..+...||.+|.. ..|+++|..+|++|.+-.
T Consensus 281 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~ 333 (338)
T 3ro2_A 281 KAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTA----LGNHDQAMHFAEKHLEIS 333 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHH
Confidence 456666655444433 44 5567777777763 357788888888876644
No 106
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=76.36 E-value=10 Score=25.39 Aligned_cols=45 Identities=13% Similarity=0.068 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCcc-ccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVA-EMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~-qD~~KA~~Wf~KAAe 130 (137)
.|..+|..+++. ...+..+.+++|.+|.. . .++.+|..+|+++.+
T Consensus 60 ~A~~~~~~a~~~-~~~~~~~~~~l~~~~~~----~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 60 KAQESFRQALSI-KPDSAEINNNYGWFLCG----RLNRPAESMAYFDKALA 105 (225)
T ss_dssp HHHHHHHHHHHH-CTTCHHHHHHHHHHHHT----TTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh-CCCChHHHHHHHHHHHH----hcCcHHHHHHHHHHHHc
Confidence 455666632221 23467777777777763 2 477777777777776
No 107
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=76.27 E-value=6.5 Score=31.96 Aligned_cols=50 Identities=8% Similarity=0.035 Sum_probs=36.9
Q ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 79 SDCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 79 ~d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
-+.|...|..+++ ..-.+..+.+++|.+|.. ..+|+++|+.+|++|.+.+
T Consensus 113 ~~~Al~~~~~al~-l~P~~~~a~~~~g~~l~~---~g~d~~eAl~~~~~al~l~ 162 (382)
T 2h6f_A 113 SERAFKLTRDAIE-LNAANYTVWHFRRVLLKS---LQKDLHEEMNYITAIIEEQ 162 (382)
T ss_dssp CHHHHHHHHHHHH-HCTTCHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHH-hCccCHHHHHHHHHHHHH---cccCHHHHHHHHHHHHHHC
Confidence 3567778874332 234789999999999984 2247999999999998754
No 108
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=75.56 E-value=5 Score=28.00 Aligned_cols=47 Identities=9% Similarity=0.006 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
.|..+|+.+++. ...+..+.+.||.+|.. ..|+++|..+|++|.+.+
T Consensus 55 ~A~~~~~~al~~-~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~ 101 (252)
T 2ho1_A 55 QAKVPLRKALEI-DPSSADAHAALAVVFQT----EMEPKLADEEYRKALASD 101 (252)
T ss_dssp GGHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc-CCChHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHC
Confidence 466778743322 34689999999999985 469999999999997653
No 109
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=75.28 E-value=6.9 Score=29.83 Aligned_cols=47 Identities=11% Similarity=-0.000 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHc-CCH----HHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKN-GDK----AMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~-GD~----~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|..+++.+.. +|. .+.++||.+|.. ..|+++|..+|++|.+
T Consensus 201 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~----~g~~~~A~~~~~~al~ 252 (383)
T 3ulq_A 201 EDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNS----QSQYEDAIPYFKRAIA 252 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHH
Confidence 4577888876666554 333 588999999984 4689999999999976
No 110
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=75.19 E-value=3.8 Score=28.04 Aligned_cols=45 Identities=11% Similarity=0.059 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|...|.. + ...++.+.+++|.+|.. ..|+.+|+.+|++|.+.+
T Consensus 23 ~~A~~~~~~---a-~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 67 (213)
T 1hh8_A 23 KGALDAFSA---V-QDPHSRICFNIGCMYTI----LKNMTEAEKAFTRSINRD 67 (213)
T ss_dssp HHHHHHHHT---S-SSCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---H-cCCChHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 346667762 3 34588999999999985 468999999999998653
No 111
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=74.91 E-value=6.1 Score=28.20 Aligned_cols=48 Identities=4% Similarity=-0.047 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHcCC--HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGD--KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD--~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|...|+.+++.--.+. ..++++||.+|+. ..|+.+|+..|+++.+.
T Consensus 21 ~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~----~~~~~~A~~~~~~~l~~ 70 (225)
T 2yhc_A 21 RQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK----NADLPLAQAAIDRFIRL 70 (225)
T ss_dssp HHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHH
Confidence 457788884333222222 4799999999985 46899999999998764
No 112
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=74.77 E-value=11 Score=28.21 Aligned_cols=49 Identities=2% Similarity=-0.201 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHc-CC----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKN-GD----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~-GD----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++.... |+ ..+..+||.+|.. ..++.+|+.+|++|.+..
T Consensus 135 ~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 188 (292)
T 1qqe_A 135 AKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKAL----DGQYIEASDIYSKLIKSS 188 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHH
Confidence 4678889876666543 44 4678899999984 358999999999998754
No 113
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=74.60 E-value=7.5 Score=29.28 Aligned_cols=47 Identities=6% Similarity=0.033 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHc-CC----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKN-GD----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~-GD----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|+.++..... |+ ..+..+||.+|.. ..++.+|+.+|++|.+
T Consensus 132 ~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~ 183 (307)
T 2ifu_A 132 SKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVR----QQKFDEAAASLQKEKS 183 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 4577888876665554 43 5678899999874 3589999999998875
No 114
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=74.03 E-value=12 Score=24.95 Aligned_cols=48 Identities=17% Similarity=0.056 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHcC-----CHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNG-----DKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~G-----D~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|..++..++.. ...+.++||.+|.. ..|+.+|..+|++|.+.
T Consensus 43 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 43 DEARASFQALQQQAQKSGDHTAEHRALHQVGMVERM----AGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 35777888666655542 35678899999884 45899999999998653
No 115
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=74.02 E-value=7.9 Score=28.58 Aligned_cols=47 Identities=13% Similarity=0.080 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHc-CC----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKN-GD----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~-GD----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|..+++.+.. ++ ..+...||.+|.. ..|+.+|..+|++|.+
T Consensus 284 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~ 335 (406)
T 3sf4_A 284 EKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTA----LGNHDQAMHFAEKHLE 335 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 3566677655554443 44 6677788888773 3578888888887754
No 116
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=74.01 E-value=7.3 Score=29.84 Aligned_cols=47 Identities=9% Similarity=0.069 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHc-CC----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKN-GD----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~-GD----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|..+++.++. || ..+.++||.+|.. ..++++|..+|++|.+
T Consensus 199 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~----~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 199 DKALPHLEAALELAMDIQNDRFIAISLLNIANSYDR----SGDDQMAVEHFQKAAK 250 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHH
Confidence 3577888876666553 44 4578889999974 4689999999999876
No 117
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=73.99 E-value=4.2 Score=31.20 Aligned_cols=48 Identities=8% Similarity=-0.024 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHc-C---CHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKN-G---DKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~-G---D~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|..++..++. + .+.+.++||.+|.. ..++++|..+|++|.+.
T Consensus 239 ~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 290 (378)
T 3q15_A 239 QMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCK----AGQTQKAFQFIEEGLDH 290 (378)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHH
Confidence 4677888866554332 2 37789999999984 46899999999999764
No 118
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=73.95 E-value=6.3 Score=27.49 Aligned_cols=46 Identities=11% Similarity=0.000 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHc--CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKN--GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~--GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+. +.+. .++.+.++||.+|.. ..|+.+|+.+|++|.+..
T Consensus 59 ~~A~~~~~~---al~~~p~~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~ 106 (228)
T 4i17_A 59 KEAADYFDI---AIKKNYNLANAYIGKSAAYRD----MKNNQEYIATLTEGIKAV 106 (228)
T ss_dssp HHHHHHHHH---HHHTTCSHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHH---HHHhCcchHHHHHHHHHHHHH----cccHHHHHHHHHHHHHHC
Confidence 467788884 4443 478999999999985 369999999999997643
No 119
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=73.87 E-value=7.8 Score=28.82 Aligned_cols=31 Identities=6% Similarity=0.064 Sum_probs=16.8
Q ss_pred CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 96 GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 96 GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.++.+.++||.+|.. ..++.+|..+|++|.+
T Consensus 245 ~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~ 275 (365)
T 4eqf_A 245 EDYSLWNRLGATLAN----GDRSEEAVEAYTRALE 275 (365)
T ss_dssp TCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHh
Confidence 345555555555553 2455555555555544
No 120
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=73.79 E-value=7 Score=27.95 Aligned_cols=31 Identities=6% Similarity=-0.106 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 96 GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 96 GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.++.+.++||.+|.. ..++++|..+|++|.+
T Consensus 234 ~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~ 264 (330)
T 3hym_B 234 KWEPLLNNLGHVCRK----LKKYAEALDYHRQALV 264 (330)
T ss_dssp TCCHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHh
Confidence 345666677766653 2466667777766654
No 121
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=73.77 E-value=3.3 Score=25.11 Aligned_cols=32 Identities=6% Similarity=0.051 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 97 DKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 97 D~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
++.+.+.+|..|.. ..|+.+|+.+|++|.+.+
T Consensus 3 ~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~ 34 (111)
T 2l6j_A 3 QFEKQKEQGNSLFK----QGLYREAVHCYDQLITAQ 34 (111)
T ss_dssp HHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcC
Confidence 35678889999884 469999999999997653
No 122
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=73.76 E-value=9.5 Score=25.53 Aligned_cols=48 Identities=8% Similarity=0.183 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++. ...+..+.+.+|.+|.. ..++.+|..+|+++.+.+
T Consensus 25 ~~A~~~~~~~~~~-~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~ 72 (225)
T 2vq2_A 25 RQATASIEDALKS-DPKNELAWLVRAEIYQY----LKVNDKAQESFRQALSIK 72 (225)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh-CccchHHHHHHHHHHHH----cCChHHHHHHHHHHHHhC
Confidence 4577888753332 23678999999999984 468999999999997643
No 123
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=73.57 E-value=6.3 Score=29.22 Aligned_cols=47 Identities=4% Similarity=0.038 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHc--CC----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKN--GD----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~--GD----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|+.+++.++. ++ ..+.++||.+|.. ..++++|.++|++|.+
T Consensus 172 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~----~~~y~~A~~~~~~al~ 224 (293)
T 3u3w_A 172 KKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL----DSRYEESLYQVNKAIE 224 (293)
T ss_dssp HHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH----HhHHHHHHHHHHHHHH
Confidence 4677888876665543 23 4577899999984 4699999999999864
No 124
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=73.48 E-value=4.5 Score=28.99 Aligned_cols=48 Identities=4% Similarity=-0.090 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++. ...+..+.++||.+|.. ..++.+|..+|++|.+.+
T Consensus 253 ~~A~~~~~~a~~~-~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~ 300 (330)
T 3hym_B 253 AEALDYHRQALVL-IPQNASTYSAIGYIHSL----MGNFENAVDYFHTALGLR 300 (330)
T ss_dssp HHHHHHHHHHHHH-STTCSHHHHHHHHHHHH----HTCHHHHHHHHHTTTTTC
T ss_pred HHHHHHHHHHHhh-CccchHHHHHHHHHHHH----hccHHHHHHHHHHHHccC
Confidence 4677888854332 24588999999999985 468999999999997754
No 125
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=73.30 E-value=5.7 Score=35.53 Aligned_cols=30 Identities=7% Similarity=-0.001 Sum_probs=13.8
Q ss_pred CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhh
Q 032634 96 GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELP 129 (137)
Q Consensus 96 GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAA 129 (137)
.++.|.++||.+|.. ..++++|+..|++|.
T Consensus 41 ~~~~a~~nLg~~l~~----~g~~~eA~~~~~~Al 70 (723)
T 4gyw_A 41 EFAAAHSNLASVLQQ----QGKLQEALMHYKEAI 70 (723)
T ss_dssp CCHHHHHHHHHHHHH----TTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHH
Confidence 344455555554442 234444555554444
No 126
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=73.25 E-value=6.4 Score=29.19 Aligned_cols=46 Identities=4% Similarity=-0.071 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHcC-C----HHHHHHHHHHhhcCCCccccHHHH-HHHHHHhh
Q 032634 80 DCVQRWFQDTLREAKNG-D----KAMEVLVGQMYLSGYGVAEMKKRG-MLGLRELP 129 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~G-D----~~AQ~~LG~MY~~G~GV~qD~~KA-~~Wf~KAA 129 (137)
+.|..+|+.+++.+... + ..+.+++|.+|.. ..++++| ..+|++|.
T Consensus 213 ~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~----~g~~~~Ai~~~~~~Al 264 (293)
T 2qfc_A 213 EESLYQVNKAIEISCRINSMALIGQLYYQRGECLRK----LEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHH----TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH----cCCcHHHHHHHHHHHH
Confidence 36778888777666542 2 7889999999984 2467788 77788775
No 127
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=73.22 E-value=7.7 Score=31.68 Aligned_cols=48 Identities=8% Similarity=-0.067 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHcCC--------------HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 81 CVQRWFQDTLREAKNGD--------------KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD--------------~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
.|..+|..+++....-. ..+.++||.+|.. ..++.+|+.+|++|.+.+
T Consensus 286 ~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~----~g~~~~A~~~~~~al~~~ 347 (457)
T 1kt0_A 286 QAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLK----LREYTKAVECCDKALGLD 347 (457)
T ss_dssp HHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcC
Confidence 45677775444433332 7899999999985 469999999999998754
No 128
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=73.12 E-value=4.9 Score=30.31 Aligned_cols=46 Identities=11% Similarity=0.030 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHH-----cCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAK-----NGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe-----~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.|..+|+.++..++ .....+.++||.+|.. ..++.+|..+|++|.+
T Consensus 104 ~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~ 154 (411)
T 4a1s_A 104 KAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKV----MGRFDEAAICCERHLT 154 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHH
Confidence 56678876666552 3456788899999874 3589999999998865
No 129
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=72.95 E-value=7.9 Score=28.43 Aligned_cols=45 Identities=11% Similarity=0.118 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.|..+|+.+++. .-.++.+.++||.+|.. ..++.+|..+|++|.+
T Consensus 235 ~A~~~~~~al~~-~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~ 279 (368)
T 1fch_A 235 KAVDCFTAALSV-RPNDYLLWNKLGATLAN----GNQSEEAVAAYRRALE 279 (368)
T ss_dssp HHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CcCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 455555532221 22355666666666653 2456666666666544
No 130
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=72.89 E-value=5.2 Score=30.53 Aligned_cols=47 Identities=6% Similarity=-0.057 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHH-----cCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAK-----NGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe-----~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|+.+++.++ .+.+.+.++||.+|.. ..++++|..+|++|.+
T Consensus 241 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~ 292 (383)
T 3ulq_A 241 EDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYK----LGKIDKAHEYHSKGMA 292 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHH
Confidence 467788886555433 3347889999999984 3589999999999865
No 131
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=72.77 E-value=4.6 Score=32.38 Aligned_cols=33 Identities=12% Similarity=0.002 Sum_probs=28.1
Q ss_pred CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 96 GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 96 GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
.+..+.++||.+|+. ..++.+|+.+|++|.+.+
T Consensus 271 ~~~~~~~nla~~~~~----~g~~~~A~~~~~~al~~~ 303 (370)
T 1ihg_A 271 VALSCVLNIGACKLK----MSDWQGAVDSCLEALEID 303 (370)
T ss_dssp HHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHh----ccCHHHHHHHHHHHHHhC
Confidence 567889999999984 468999999999998864
No 132
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=72.54 E-value=5.5 Score=28.24 Aligned_cols=48 Identities=10% Similarity=-0.020 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHH-------cCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAK-------NGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe-------~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|..++..++ .....+.++||.+|.. ..++.+|..+|++|.+.
T Consensus 86 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~~ 140 (311)
T 3nf1_A 86 KDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK----RGKYKEAEPLCKRALEI 140 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHH----cCcHHHHHHHHHHHHHH
Confidence 356677876555542 2346788999999974 46899999999998753
No 133
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=72.54 E-value=9.7 Score=28.94 Aligned_cols=47 Identities=13% Similarity=0.057 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|+.+++. .-.++.+.+.||.+|.. ..|+++|..+|++|.+.
T Consensus 312 ~~A~~~~~~a~~~-~p~~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~ 358 (450)
T 2y4t_A 312 VEAIRVCSEVLQM-EPDNVNALKDRAEAYLI----EEMYDEAIQDYETAQEH 358 (450)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHh-CcccHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHh
Confidence 3566777742221 34688999999999984 46899999999999774
No 134
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=72.44 E-value=11 Score=27.16 Aligned_cols=48 Identities=8% Similarity=0.045 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|..+++. .-.+..+.+.+|.+|.. ..++++|..+|+++.+.+
T Consensus 54 ~~A~~~~~~~~~~-~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~ 101 (359)
T 3ieg_A 54 KAALPDLTKVIAL-KMDFTAARLQRGHLLLK----QGKLDEAEDDFKKVLKSN 101 (359)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHh-CCCcchHHHHHHHHHHH----cCChHHHHHHHHHHHhcC
Confidence 3566777743322 33577888888888874 467888888888887654
No 135
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=72.29 E-value=11 Score=26.51 Aligned_cols=46 Identities=13% Similarity=0.104 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHc-CC----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAKN-GD----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~-GD----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.|..+|+.++..+.. ++ ..+.+.||.+|.. ..++.+|..+|++|.+
T Consensus 241 ~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~ 291 (338)
T 3ro2_A 241 TASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL----LQDYEKAIDYHLKHLA 291 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHH
Confidence 456677655555443 33 6677788888774 3578888888888754
No 136
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=72.15 E-value=6.2 Score=35.29 Aligned_cols=45 Identities=7% Similarity=-0.019 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.|...|+.+++ ..-.++.+.++||.+|.. ..++++|+++|++|.+
T Consensus 61 eA~~~~~~Al~-l~P~~~~a~~nLg~~l~~----~g~~~~A~~~~~kAl~ 105 (723)
T 4gyw_A 61 EALMHYKEAIR-ISPTFADAYSNMGNTLKE----MQDVQGALQCYTRAIQ 105 (723)
T ss_dssp HHHHHHHHHHH-HCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 45555553221 122456666666666653 2456666666666654
No 137
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=72.14 E-value=10 Score=28.43 Aligned_cols=32 Identities=9% Similarity=0.026 Sum_probs=17.9
Q ss_pred CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 96 GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 96 GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
.++.+.+++|.+|.. ..++.+|..+|++|.+.
T Consensus 36 ~~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~ 67 (281)
T 2c2l_A 36 LVAVYYTNRALCYLK----MQQPEQALADCRRALEL 67 (281)
T ss_dssp CCHHHHHHHHHHHHH----TTCHHHHHHHHHHHTTS
T ss_pred ccHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHh
Confidence 355666666666553 23566666666665543
No 138
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=71.28 E-value=12 Score=25.43 Aligned_cols=46 Identities=11% Similarity=0.139 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 82 VQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 82 A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+..+|+.++ ...-+|+.+.++||.+|.. ..++++|..+|+++.+.+
T Consensus 93 a~~~~~~al-~~~P~~~~~~~~la~~~~~----~g~~~~A~~~~~~~l~~~ 138 (176)
T 2r5s_A 93 ELKRLEQEL-AANPDNFELACELAVQYNQ----VGRDEEALELLWNILKVN 138 (176)
T ss_dssp HHHHHHHHH-HHSTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHH-HhCCCCHHHHHHHHHHHHH----cccHHHHHHHHHHHHHhC
Confidence 456676322 1233689999999999984 468999999999998775
No 139
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=71.12 E-value=7.2 Score=29.03 Aligned_cols=48 Identities=10% Similarity=0.185 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHc-CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKN-GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~-GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|+.+++.... .++.+.++||.+|.. ..++.+|+.+|++|.+.
T Consensus 194 ~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 242 (365)
T 4eqf_A 194 EGVKELYLEAAHQNGDMIDPDLQTGLGVLFHL----SGEFNRAIDAFNAALTV 242 (365)
T ss_dssp HHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCccCHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHh
Confidence 4677888854443222 179999999999984 46899999999999764
No 140
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=70.70 E-value=11 Score=27.75 Aligned_cols=48 Identities=13% Similarity=0.119 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHcC-CHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNG-DKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~G-D~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|+.+++..... ++.+.++||.+|.. ..++++|+.+|++|.+.
T Consensus 198 ~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 246 (368)
T 1fch_A 198 LEVKELFLAAVRLDPTSIDPDVQCGLGVLFNL----SGEYDKAVDCFTAALSV 246 (368)
T ss_dssp HHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCcccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 45667777433322221 56777778887774 35777888888777653
No 141
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=70.65 E-value=6.4 Score=27.87 Aligned_cols=48 Identities=2% Similarity=-0.130 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHH-------cCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAK-------NGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe-------~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|+.+++..+ .....+.++||.+|.. ..++.+|..+|++|.+.
T Consensus 128 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 128 KEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQN----QGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 356777876555542 2346778999999984 36899999999998763
No 142
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=70.53 E-value=6 Score=28.04 Aligned_cols=46 Identities=15% Similarity=0.130 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHc--CCHHHHHH----------------HHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKN--GDKAMEVL----------------VGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~--GD~~AQ~~----------------LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+. +.+. .++.+.++ ||.+|.. ..++++|+.+|++|.+.+
T Consensus 21 ~~A~~~~~~---al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 84 (208)
T 3urz_A 21 GQAVSYFRQ---TIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKK----NRNYDKAYLFYKELLQKA 84 (208)
T ss_dssp HHHHHHHHH---HHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHC
Confidence 467788873 4433 46778888 9999984 478999999999998654
No 143
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=70.33 E-value=8.5 Score=31.53 Aligned_cols=45 Identities=9% Similarity=0.054 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.|..+|+.+++. .-.+..+.++||.+|.. ..++++|.++|++|.+
T Consensus 75 ~A~~~~~~al~~-~p~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~ 119 (568)
T 2vsy_A 75 EAAVLLQQASDA-APEHPGIALWLGHALED----AGQAEAAAAAYTRAHQ 119 (568)
T ss_dssp HHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-CCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 455555532221 23456666666666653 2456666666666654
No 144
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=70.32 E-value=3.1 Score=27.99 Aligned_cols=31 Identities=3% Similarity=0.065 Sum_probs=16.3
Q ss_pred CCHHHHHHHHHH-hhcCCCccccH--HHHHHHHHHhhc
Q 032634 96 GDKAMEVLVGQM-YLSGYGVAEMK--KRGMLGLRELPQ 130 (137)
Q Consensus 96 GD~~AQ~~LG~M-Y~~G~GV~qD~--~KA~~Wf~KAAe 130 (137)
.++.+.+++|.+ |..- .++ .+|..+|+++.+
T Consensus 76 ~~~~~~~~la~~l~~~~----~~~~~~~A~~~~~~al~ 109 (177)
T 2e2e_A 76 ENAELYAALATVLYYQA----SQHMTAQTRAMIDKALA 109 (177)
T ss_dssp SCHHHHHHHHHHHHHHT----TTCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhc----CCcchHHHHHHHHHHHH
Confidence 355666666666 4221 233 566666666554
No 145
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=69.99 E-value=9.7 Score=29.62 Aligned_cols=48 Identities=6% Similarity=0.074 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++. .-.+..+.++||.+|.. ..++++|..+|++|.+..
T Consensus 445 ~~A~~~~~~a~~~-~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 445 NAAIKLLTKACEL-DPRSEQAKIGLAQLKLQ----MEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh-CCCCHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhC
Confidence 4677888853332 34688999999999984 468999999999997643
No 146
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=69.49 E-value=13 Score=25.38 Aligned_cols=47 Identities=13% Similarity=0.150 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
.|...|+.+++. ...+..+.+.+|.+|.. ..|+++|..+|+++.+.+
T Consensus 75 ~A~~~~~~~~~~-~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~ 121 (243)
T 2q7f_A 75 RALAFYDKALEL-DSSAATAYYGAGNVYVV----KEMYKEAKDMFEKALRAG 121 (243)
T ss_dssp HHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc-CCcchHHHHHHHHHHHH----hccHHHHHHHHHHHHHhC
Confidence 455666532221 23577788888888773 357888888888776543
No 147
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=68.54 E-value=7.1 Score=29.41 Aligned_cols=47 Identities=13% Similarity=0.067 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHc-CC----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKN-GD----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~-GD----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|+.++..+.. ++ ..+..+||.+|.. ..|+.+|..+|++|.+
T Consensus 280 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~ 331 (411)
T 4a1s_A 280 EDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTL----LHEFNTAIEYHNRHLA 331 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 4567777766655543 33 5677888888873 3578888888888754
No 148
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=68.41 E-value=11 Score=31.28 Aligned_cols=30 Identities=10% Similarity=-0.067 Sum_probs=14.7
Q ss_pred CHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 97 DKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 97 D~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
++.+.++||.+|.. ..++++|+.+|++|.+
T Consensus 39 ~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~ 68 (477)
T 1wao_1 39 NAIYYGNRSLAYLR----TECYGYALGDATRAIE 68 (477)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH----hcCHHHHHHHHHHHHH
Confidence 45555555555542 2345555555555544
No 149
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=68.27 E-value=5.7 Score=29.91 Aligned_cols=45 Identities=13% Similarity=0.127 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHH--cCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAK--NGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe--~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|+ ++.+ -++..+.++||.+|.. ..++++|..+|++|.+.
T Consensus 55 ~~A~~~~~---~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~l 101 (281)
T 2c2l_A 55 EQALADCR---RALELDGQSVKAHFFLGQCQLE----MESYDEAIANLQRAYSL 101 (281)
T ss_dssp HHHHHHHH---HHTTSCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 45667777 3443 3689999999999984 35899999999998753
No 150
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=68.11 E-value=13 Score=26.41 Aligned_cols=45 Identities=4% Similarity=0.042 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.|..+|..+++. ...++.+.+++|.+|.. ..++++|..+|++|.+
T Consensus 190 ~A~~~~~~~~~~-~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~ 234 (327)
T 3cv0_A 190 SAAANLRRAVEL-RPDDAQLWNKLGATLAN----GNRPQEALDAYNRALD 234 (327)
T ss_dssp HHHHHHHHHHHH-CTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 455555532211 22455666666666653 2456666666666544
No 151
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=67.60 E-value=7.4 Score=32.22 Aligned_cols=47 Identities=2% Similarity=-0.161 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|+.+++. .-.++.+.++||.+|.. ..++++|..+|++|.+.
T Consensus 57 ~~A~~~~~~al~l-~p~~~~~~~~lg~~~~~----~g~~~eA~~~~~~al~~ 103 (477)
T 1wao_1 57 GYALGDATRAIEL-DKKYIKGYYRRAASNMA----LGKFRAALRDYETVVKV 103 (477)
T ss_dssp HHHHHHHHHHHHS-CTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 4577788742222 23689999999999984 46899999999999764
No 152
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=67.05 E-value=15 Score=26.14 Aligned_cols=47 Identities=13% Similarity=0.199 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|..+++. ...+..+.+.||.+|.. ..++++|..+|+++.+.
T Consensus 155 ~~A~~~~~~~~~~-~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~ 201 (327)
T 3cv0_A 155 RECRTLLHAALEM-NPNDAQLHASLGVLYNL----SNNYDSAAANLRRAVEL 201 (327)
T ss_dssp HHHHHHHHHHHHH-STTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-CCCCHHHHHHHHHHHHH----hccHHHHHHHHHHHHHh
Confidence 4566666643322 22367777777777763 34677777777776543
No 153
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=66.48 E-value=14 Score=27.23 Aligned_cols=46 Identities=11% Similarity=0.105 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHcCC----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKNGD----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|+.+++. ..+| ..+.+.||.+|.. ..|+.+|..+|++|.+
T Consensus 26 ~~A~~~~~~al~~-~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~ 75 (406)
T 3sf4_A 26 RAGVSFFEAAVQV-GTEDLKTLSAIYSQLGNAYFY----LHDYAKALEYHHHDLT 75 (406)
T ss_dssp HHHHHHHHHHHHH-CCSCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-CcccHHHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHH
Confidence 3566778754443 2334 3577888888874 3578888888888754
No 154
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=65.75 E-value=15 Score=25.06 Aligned_cols=46 Identities=15% Similarity=0.221 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
.|..+|+.+++. ...+..+.+.+|.+|.. ..++++|..+|+++.+.
T Consensus 109 ~A~~~~~~~~~~-~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~ 154 (243)
T 2q7f_A 109 EAKDMFEKALRA-GMENGDLFYMLGTVLVK----LEQPKLALPYLQRAVEL 154 (243)
T ss_dssp HHHHHHHHHHHH-TCCSHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCCCHHHHHHHHHHHHH----hccHHHHHHHHHHHHHh
Confidence 455666632221 23467788888888773 35788888888877653
No 155
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=64.49 E-value=13 Score=28.28 Aligned_cols=46 Identities=11% Similarity=0.082 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
.|..+|+.+++. .-.++.+.+.+|.+|..- .++.+|+.+|++|.+.
T Consensus 44 ~A~~~~~~~l~~-~p~~~~~~~~l~~~~~~~----g~~~~A~~~~~~al~~ 89 (450)
T 2y4t_A 44 DALSQFHAAVDG-DPDNYIAYYRRATVFLAM----GKSKAALPDLTKVIQL 89 (450)
T ss_dssp HHHHHHHHHHHH-CTTCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCccHHHHHHHHHHHHHC----CCHHHHHHHHHHHHhc
Confidence 455555532211 224566666666666532 3566666666666543
No 156
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=64.35 E-value=11 Score=32.50 Aligned_cols=47 Identities=9% Similarity=-0.137 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
.|..+|+.+++ ..-.|..+.+++|.+|.. ..++++|+..|++|.+.+
T Consensus 451 ~A~~~~~~al~-~~p~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~l~ 497 (681)
T 2pzi_A 451 KATRKLDDLAE-RVGWRWRLVWYRAVAELL----TGDYDSATKHFTEVLDTF 497 (681)
T ss_dssp HHHHHHHHHHH-HHCCCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhc-cCcchHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 55667764222 234789999999999984 468999999999997643
No 157
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=64.25 E-value=15 Score=27.63 Aligned_cols=45 Identities=2% Similarity=-0.050 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.|..+|..+++ ..-.++.+.++||.+|.. ..++.+|..+|++|.+
T Consensus 153 ~A~~~~~~al~-~~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~ 197 (388)
T 1w3b_A 153 EAKACYLKAIE-TQPNFAVAWSNLGCVFNA----QGEIWLAIHHFEKAVT 197 (388)
T ss_dssp HHHHHHHHHHH-HCTTCHHHHHHHHHHHHT----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHh
Confidence 45566663222 123566777777777763 2467777777777754
No 158
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=64.15 E-value=22 Score=26.73 Aligned_cols=31 Identities=3% Similarity=-0.142 Sum_probs=16.5
Q ss_pred CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 96 GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 96 GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.++.+.++||.+|.. ..++++|..+|++|.+
T Consensus 303 ~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~ 333 (388)
T 1w3b_A 303 THADSLNNLANIKRE----QGNIEEAVRLYRKALE 333 (388)
T ss_dssp TCHHHHHHHHHHHHT----TTCHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHh
Confidence 345555555555542 2355556666655544
No 159
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=63.77 E-value=9.7 Score=27.31 Aligned_cols=52 Identities=4% Similarity=-0.129 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHc--CCHHHHHHHHHHhhcCC----CccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKN--GDKAMEVLVGQMYLSGY----GVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~--GD~~AQ~~LG~MY~~G~----GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|+.+++.--. ..+.+.++||.+|+.-. --..++.+|+.+|+++.+.
T Consensus 69 ~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~ 126 (261)
T 3qky_A 69 LLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDR 126 (261)
T ss_dssp HHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH
Confidence 4577888843332111 34789999999998510 0157899999999998764
No 160
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=62.58 E-value=15 Score=27.93 Aligned_cols=46 Identities=9% Similarity=-0.147 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
.|...|+.++.. .-.++.+.+++|.+|.. ..++++|...|++|.+.
T Consensus 184 eA~~~~~~~l~~-~p~~~~~~~~la~~~~~----~g~~~eA~~~l~~al~~ 229 (291)
T 3mkr_A 184 DAYYIFQEMADK-CSPTLLLLNGQAACHMA----QGRWEAAEGVLQEALDK 229 (291)
T ss_dssp HHHHHHHHHHHH-SCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 455555533222 23466666666666653 24666666666666543
No 161
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=62.29 E-value=14 Score=29.28 Aligned_cols=48 Identities=15% Similarity=0.203 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.+++. .-.|+.+.+.||.+|.. ..++++|.++|+++.+.+
T Consensus 533 ~~A~~~~~~~~~~-~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~~l~~~ 580 (597)
T 2xpi_A 533 DAAIDALNQGLLL-STNDANVHTAIALVYLH----KKIPGLAITHLHESLAIS 580 (597)
T ss_dssp HHHHHHHHHHHHH-SSCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh-CCCChHHHHHHHHHHHH----hCCHHHHHHHHHHHHhcC
Confidence 4577888742222 23589999999999985 468999999999987643
No 162
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=61.99 E-value=4.9 Score=27.44 Aligned_cols=47 Identities=9% Similarity=-0.024 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..+|+.+++ ..-+++.+.++||.+|.. ..++++|+..|+++.+.
T Consensus 23 ~~A~~~~~~al~-~~P~~~~a~~~la~~~~~----~g~~~~A~~~~~~a~~~ 69 (176)
T 2r5s_A 23 AQALNVIQTLSD-ELQSRGDVKLAKADCLLE----TKQFELAQELLATIPLE 69 (176)
T ss_dssp HHHHHHHHTSCH-HHHTSHHHHHHHHHHHHH----TTCHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHH-HCCCcHHHHHHHHHHHHH----CCCHHHHHHHHHHhhhc
Confidence 456677774332 344789999999999984 35789999999887654
No 163
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=61.79 E-value=18 Score=28.71 Aligned_cols=32 Identities=0% Similarity=-0.068 Sum_probs=19.0
Q ss_pred CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 96 GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 96 GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
.+..+.+.||.+|.. ..++++|+.+|+++.+.
T Consensus 405 ~~~~~~~~l~~~~~~----~g~~~~A~~~~~~~~~~ 436 (597)
T 2xpi_A 405 QFGPAWIGFAHSFAI----EGEHDQAISAYTTAARL 436 (597)
T ss_dssp TCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 456666666666653 34666666666666543
No 164
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=61.10 E-value=19 Score=27.61 Aligned_cols=48 Identities=10% Similarity=0.078 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+.++. ....+..+.+.||.+|.. ..|+.+|..+|++|.+.+
T Consensus 432 ~~A~~~~~~a~~-~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~ 479 (514)
T 2gw1_A 432 IEATNLLEKASK-LDPRSEQAKIGLAQMKLQ----QEDIDEAITLFEESADLA 479 (514)
T ss_dssp HHHHHHHHHHHH-HCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-hCcccHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhc
Confidence 467778874333 234689999999999984 468999999999997654
No 165
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=61.08 E-value=11 Score=28.99 Aligned_cols=32 Identities=9% Similarity=-0.085 Sum_probs=15.8
Q ss_pred CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 96 GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 96 GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
.+..+.+.+|.+|.. ..++++|...|+++.+.
T Consensus 71 ~~~~~~~~l~~~~~~----~g~~~~A~~~~~~~~~~ 102 (514)
T 2gw1_A 71 DYSKVLLRRASANEG----LGKFADAMFDLSVLSLN 102 (514)
T ss_dssp CCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHH----HhhHHHHHHHHHHHHhc
Confidence 345555555555542 23455555555555443
No 166
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=59.95 E-value=14 Score=30.21 Aligned_cols=46 Identities=9% Similarity=0.058 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHc--CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKN--GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~--GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|...|+. +.+. .+..+.++||.+|.. ..++++|..+|++|.+.+
T Consensus 40 ~~A~~~~~~---al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 87 (568)
T 2vsy_A 40 TAGEMAVQR---GLALHPGHPEAVARLGRVRWT----QQRHAEAAVLLQQASDAA 87 (568)
T ss_dssp HHHHHHHHH---HHTTSTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHhCCCCHHHHHHHHHHHHH----CCCHHHHHHHHHHHHhcC
Confidence 356677773 3333 578899999999885 367899999999987653
No 167
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=59.58 E-value=13 Score=27.95 Aligned_cols=46 Identities=15% Similarity=0.102 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHcCCHH----HHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAKNGDKA----MEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~----AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.+..+|+.++.....++.. +.++||.+|.. ..|+.+|..+|++|.+
T Consensus 32 ~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~ 81 (373)
T 1hz4_A 32 EAERLAKLALEELPPGWFYSRIVATSVLGEVLHC----KGELTRSLALMQQTEQ 81 (373)
T ss_dssp HHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHHH
Confidence 4556666544444444432 55666666652 2466777777776653
No 168
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=59.46 E-value=25 Score=27.05 Aligned_cols=47 Identities=2% Similarity=-0.106 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHH--------cCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAK--------NGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe--------~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|...|+++++... .....+..+||.+|.. ..++.+|..+|++|.+
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~----~g~~~~A~~~~~ka~~ 122 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH----MGRLSDVQIYVDKVKH 122 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHH
Confidence 467888886555432 2345678899999985 3589999999998854
No 169
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=58.97 E-value=15 Score=27.38 Aligned_cols=47 Identities=6% Similarity=-0.072 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHH------HHcCCHHHH----HHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLRE------AKNGDKAME----VLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkA------Ae~GD~~AQ----~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+|..++.. ..-.+..|. +++|..|. --.++++|+..|++|.+
T Consensus 74 ~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~----~lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 74 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALD----GLGRGAEAMPEFKKVVE 130 (159)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHH----HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHH----HCCCHHHHHHHHHHHHh
Confidence 3567788743332 033678888 99999987 33689999999999965
No 170
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=57.89 E-value=18 Score=27.05 Aligned_cols=48 Identities=6% Similarity=-0.043 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|...|+.+++...-++..+...+|.+|.. ..++++|...|++|.+.
T Consensus 81 ~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~ 128 (308)
T 2ond_A 81 DEAANIYERAISTLLKKNMLLYFAYADYEES----RMKYEKVHSIYNRLLAI 128 (308)
T ss_dssp HHHHHHHHHHHTTTTTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhc
Confidence 5677777732222223577788888887763 23778888888887764
No 171
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=57.08 E-value=15 Score=30.66 Aligned_cols=51 Identities=10% Similarity=0.026 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCcc-ccHHHHHHHHHHhhcCCCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVA-EMKKRGMLGLRELPQVDLL 134 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~-qD~~KA~~Wf~KAAeqg~~ 134 (137)
+.|...|+.+++..-.|++.+.+..|..|+ ++ +|++.|...+++|...+.-
T Consensus 221 ekA~~~ferAL~LnP~~~id~~v~YA~~l~----~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 221 EKAHTAFEHLTRYCSAHDPDHHITYADALC----IPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHHHHCCTTCSHHHHHHHHHTT----TTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHHhCCCCCchHHHHHHHHHH----HhcCCHHHHHHHHHHHHcCCCC
Confidence 567777776666666667788888777776 32 6777777777777665543
No 172
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=53.50 E-value=17 Score=27.22 Aligned_cols=46 Identities=11% Similarity=0.149 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
.|...|+.++ ...-+++.+.++||.+|..- .++++|..+|+++.+.
T Consensus 135 ~A~~~~~~al-~~~P~~~~a~~~la~~~~~~----g~~~~A~~~l~~~~~~ 180 (287)
T 3qou_A 135 DALPLLXDAW-QLSNQNGEIGLLLAETLIAL----NRSEDAEAVLXTIPLQ 180 (287)
T ss_dssp HHHHHHHHHH-HHTTSCHHHHHHHHHHHHHT----TCHHHHHHHHTTSCGG
T ss_pred HHHHHHHHHH-HhCCcchhHHHHHHHHHHHC----CCHHHHHHHHHhCchh
Confidence 4445565322 22346788889999888743 5788888888877543
No 173
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=52.57 E-value=15 Score=27.39 Aligned_cols=46 Identities=11% Similarity=0.050 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHH-HcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREA-KNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAA-e~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.+...|+++++.. ...+.++.|+||.-|+. -.|+.+|..+++++-+
T Consensus 53 ~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~k----l~~Y~~A~~y~~~lL~ 99 (152)
T 1pc2_A 53 KGIVLLEELLPKGSKEEQRDYVFYLAVGNYR----LKEYEKALKYVRGLLQ 99 (152)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCccchHHHHHHHHHHHHH----ccCHHHHHHHHHHHHh
Confidence 4556666433322 11347788888888873 4789999999988754
No 174
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=50.46 E-value=14 Score=28.64 Aligned_cols=47 Identities=6% Similarity=0.085 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 81 CVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
.|..+|+.+++. .-.++.+.++||.+|.. ..++.+|+..|++|.+.+
T Consensus 43 ~A~~~~~~al~~-~p~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~ 89 (537)
T 3fp2_A 43 EAIKYYQYAIEL-DPNEPVFYSNISACYIS----TGDLEKVIEFTTKALEIK 89 (537)
T ss_dssp -CHHHHHHHHHH-CTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh-CCCCcHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcC
Confidence 455677632221 22578888888888874 457888888888887643
No 175
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=49.40 E-value=14 Score=27.53 Aligned_cols=49 Identities=14% Similarity=0.068 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHc--CCHHHHHHHHHHhhc------CCCccccHHHHHHHHHHhhcCC
Q 032634 81 CVQRWFQDTLREAKN--GDKAMEVLVGQMYLS------GYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~--GD~~AQ~~LG~MY~~------G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
.|...|+ ++.+. .|+++.+++|..|.. |.+.-..+++|+..|++|.+.+
T Consensus 20 eA~~~~~---~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ld 76 (158)
T 1zu2_A 20 QIRQDAE---NTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLID 76 (158)
T ss_dssp HHHHHHH---HHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHH---HHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhC
Confidence 4566666 34433 699999999999885 2223356889999999998754
No 176
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=49.15 E-value=46 Score=24.64 Aligned_cols=47 Identities=2% Similarity=-0.096 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHcC------C-----HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 81 CVQRWFQDTLREAKNG------D-----KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~G------D-----~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
.|..+|+.+++..-.- + +.+.+++|.+|.. -.++++|+.+|.+|.+-
T Consensus 29 eAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~----Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 29 EAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAG----LRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHh
Confidence 5678888655554431 2 3399999998873 24788899998888753
No 177
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=48.79 E-value=29 Score=25.98 Aligned_cols=47 Identities=6% Similarity=-0.050 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHc-C------CHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 81 CVQRWFQDTLREAKN-G------DKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~-G------D~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
.|..+|+.++..+.. | ...+..+||.+|.. ..|+++|..+|++|.+.
T Consensus 111 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 111 TAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA----WARLDEAEASARSGIEV 164 (373)
T ss_dssp HHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHH
Confidence 566778776666653 3 24567789988864 35889999999988653
No 178
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=48.65 E-value=26 Score=26.17 Aligned_cols=46 Identities=11% Similarity=0.019 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 82 VQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 82 A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+...|+.++ ...-+|+.+.++||.+|... .++++|+..|+++.+.+
T Consensus 204 a~~~l~~al-~~~P~~~~~~~~la~~l~~~----g~~~~A~~~l~~~l~~~ 249 (287)
T 3qou_A 204 EIQQLQQQV-AENPEDAALATQLALQLHQV----GRNEEALELLFGHLRXD 249 (287)
T ss_dssp HHHHHHHHH-HHCTTCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHH-hcCCccHHHHHHHHHHHHHc----ccHHHHHHHHHHHHhcc
Confidence 445555211 12347899999999999854 68999999999987654
No 179
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=47.90 E-value=25 Score=27.32 Aligned_cols=29 Identities=0% Similarity=-0.062 Sum_probs=24.4
Q ss_pred HHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 100 MEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 100 AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.++||.+|.. ..++.+|+.+|++|.+.+
T Consensus 232 ~~~nla~~~~~----~g~~~~A~~~~~~al~~~ 260 (338)
T 2if4_A 232 CHLNIAACLIK----LKRYDEAIGHCNIVLTEE 260 (338)
T ss_dssp HHHHHHHHHHT----TTCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 78999999984 468999999999997643
No 180
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=45.88 E-value=25 Score=26.17 Aligned_cols=45 Identities=13% Similarity=0.036 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHc--CCHH-HHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKN--GDKA-MEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~--GD~~-AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|...|+. +.+. .++. +..++|.++.. ..++++|...|++|.+.
T Consensus 116 ~~A~~~~~~---al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~ 163 (308)
T 2ond_A 116 EKVHSIYNR---LLAIEDIDPTLVYIQYMKFARR----AEGIKSGRMIFKKARED 163 (308)
T ss_dssp HHHHHHHHH---HHTSSSSCTHHHHHHHHHHHHH----HHCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHH---HHhccccCccHHHHHHHHHHHH----hcCHHHHHHHHHHHHhc
Confidence 456666663 3332 3454 77777777653 34667777777777664
No 181
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=43.20 E-value=27 Score=28.12 Aligned_cols=45 Identities=11% Similarity=0.041 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHcC-----CHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNG-----DKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~G-----D~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|..||+ ++.... .+.+++++|.++.. .-+.++|..+|+++...
T Consensus 188 ~eAl~~l~---~a~~g~~~P~~~~da~~~~glaL~~----lGr~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 188 TEAERRLT---EANDSPAGEACARAIAWYLAMARRS----QGNESAAVALLEWLQTT 237 (282)
T ss_dssp HHHHHHHH---HHHTSTTTTTTHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHhcCCCCccccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhc
Confidence 35667776 333222 23577777777663 23667777777776543
No 182
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=41.86 E-value=53 Score=24.76 Aligned_cols=48 Identities=13% Similarity=0.125 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
+.|...|+.+++ ..-.|+.+.++||.+|.. .| ++.+.+..+++++.+.
T Consensus 217 ~eA~~~l~~al~-~~p~~~~~l~~l~~~~~~-~g--~~~eaa~~~~~~~~~~ 264 (291)
T 3mkr_A 217 EAAEGVLQEALD-KDSGHPETLINLVVLSQH-LG--KPPEVTNRYLSQLKDA 264 (291)
T ss_dssp HHHHHHHHHHHH-HCTTCHHHHHHHHHHHHH-TT--CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hCCCCHHHHHHHHHHHHH-cC--CCHHHHHHHHHHHHHh
Confidence 467778875332 245799999999988876 23 4555677888887654
No 183
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=41.40 E-value=19 Score=29.15 Aligned_cols=46 Identities=2% Similarity=-0.140 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHH--cCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAK--NGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe--~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..+|+. +.+ -.+..+.+++|.+|.. ..++.+|+..|++|.+.+
T Consensus 149 ~eAl~~~~~---al~l~P~~~~a~~~~g~~~~~----~g~~~eAl~~~~kal~ld 196 (382)
T 2h6f_A 149 HEEMNYITA---IIEEQPKNYQVWHHRRVLVEW----LRDPSQELEFIADILNQD 196 (382)
T ss_dssp HHHHHHHHH---HHHHCTTCHHHHHHHHHHHHH----HTCCTTHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhC
Confidence 455666763 333 3578899999999874 357778888888887643
No 184
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=40.70 E-value=75 Score=25.53 Aligned_cols=48 Identities=4% Similarity=-0.060 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|...|+.+++.. -.++.....++.++.. ..|..+|..+|++|...+
T Consensus 408 ~~A~~~~e~al~~~-p~~~~~~~~~~~~~~~----~g~~~~Ar~~~~~al~~~ 455 (530)
T 2ooe_A 408 SVAFKIFELGLKKY-GDIPEYVLAYIDYLSH----LNEDNNTRVLFERVLTSG 455 (530)
T ss_dssp HHHHHHHHHHHHHH-TTCHHHHHHHHHHHTT----TTCHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHC-CCCHHHHHHHHHHHHh----CCCHhhHHHHHHHHHhcc
Confidence 45777887655432 3578888888888764 248899999999998764
No 185
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=38.02 E-value=59 Score=22.89 Aligned_cols=47 Identities=13% Similarity=0.138 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHcCC---HHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 81 CVQRWFQDTLREAKNGD---KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~GD---~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
.|...|+.+++.-- ++ ..|.+.||.+|.. ..+.++|...|+++...+
T Consensus 165 ~A~~~~~~~l~~~p-~~~~~~~a~~~l~~~~~~----~g~~~~A~~~~~~l~~~~ 214 (225)
T 2yhc_A 165 AVVNRVEGMLRDYP-DTQATRDALPLMENAYRQ----MQMNAQAEKVAKIIAANS 214 (225)
T ss_dssp HHHHHHHHHHHHST-TSHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHCc-CCCccHHHHHHHHHHHHH----cCCcHHHHHHHHHHHhhC
Confidence 56667764222211 23 3689999999885 368889999998876654
No 186
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=36.69 E-value=25 Score=30.33 Aligned_cols=31 Identities=10% Similarity=0.034 Sum_probs=16.3
Q ss_pred CHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 97 DKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 97 D~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
++.+.++||.+|.. ..++++|+.+|++|.+.
T Consensus 533 ~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~l 563 (681)
T 2pzi_A 533 VISAAFGLARARSA----EGDRVGAVRTLDEVPPT 563 (681)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHTSCTT
T ss_pred hHHHHHHHHHHHHH----cCCHHHHHHHHHhhccc
Confidence 44445555554442 23566666666666543
No 187
>1ny9_A Transcriptional activator TIPA-S; all alpha, globin like; NMR {Streptomyces lividans} SCOP: a.181.1.1
Probab=36.62 E-value=84 Score=22.03 Aligned_cols=53 Identities=23% Similarity=0.263 Sum_probs=34.7
Q ss_pred CchhhhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHhhc-----------CCCccccHHHHHHHH
Q 032634 73 PLSQVVSDCVQRWFQDTLREAKNGDKAMEVLVGQMYLS-----------GYGVAEMKKRGMLGL 125 (137)
Q Consensus 73 pl~~vv~d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~-----------G~GV~qD~~KA~~Wf 125 (137)
|=...|...+.+|..-+...--..++.+...||.||.. |-|+..=+.+|+.-|
T Consensus 74 p~s~eaq~l~~~h~~~l~~~~~~~s~e~~~~L~~mYv~D~rF~~~~d~~~~Gla~fl~~Ai~~y 137 (143)
T 1ny9_A 74 ADSEGAMDAAEDHRQGIARNHYDCGYEMHTCLGEMYVSDERFTRNIDAAKPGLAAYMRDAILAN 137 (143)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHTTSTHHHHHHHGGGSTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCHHHHHhHcccChhHHHHHHHHHHHH
Confidence 55667777777887632123344799999999999975 345555555555555
No 188
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=34.71 E-value=49 Score=26.57 Aligned_cols=31 Identities=16% Similarity=0.020 Sum_probs=25.0
Q ss_pred HHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCCC
Q 032634 99 AMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVDL 133 (137)
Q Consensus 99 ~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg~ 133 (137)
.+.++||..|.. . .+..+|+.||++|.....
T Consensus 172 ~a~~~LG~al~~-L---G~~~eAl~~l~~a~~g~~ 202 (282)
T 4f3v_A 172 AAGVAHGVAAAN-L---ALFTEAERRLTEANDSPA 202 (282)
T ss_dssp HHHHHHHHHHHH-T---TCHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHH-C---CCHHHHHHHHHHHhcCCC
Confidence 489999999873 3 389999999999985543
No 189
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=30.51 E-value=62 Score=28.05 Aligned_cols=46 Identities=7% Similarity=-0.026 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHc--CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 80 DCVQRWFQDTLREAKN--GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~--GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.|..||. +|+.. ++-..++.||.++.. ..|.-.|.+||.+|.-.-
T Consensus 169 ~~A~~~Y~---~A~~~~P~~G~~~nqLavla~~----~~~~l~a~y~y~rsl~~~ 216 (497)
T 1ya0_A 169 SQAESYYR---HAAQLVPSNGQPYNQLAILASS----KGDHLTTIFYYCRSIAVK 216 (497)
T ss_dssp HHHHHHHH---HHHHHCTTBSHHHHHHHHHHHH----TTCHHHHHHHHHHHHSSS
T ss_pred HHHHHHHH---HHHHhCCCCCchHHHHHHHHhc----ccccHHHHHHHHHHHhcC
Confidence 45778998 45554 577789999999874 237788999999986543
No 190
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=30.32 E-value=1.1e+02 Score=25.83 Aligned_cols=45 Identities=13% Similarity=0.059 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 80 DCVQRWFQDTLREAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 80 d~A~~WF~~~lkAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
+.|..+++.++.. .-+..+...||.+|. ..-++++|.++|.+|..
T Consensus 294 d~A~~~l~rAl~L--n~s~~a~~llG~~~~----~~G~~~eA~e~~~~Alr 338 (372)
T 3ly7_A 294 DESYQAINTGIDL--EMSWLNYVLLGKVYE----MKGMNREAADAYLTAFN 338 (372)
T ss_dssp HHHHHHHHHHHHH--CCCHHHHHHHHHHHH----HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc--CCCHHHHHHHHHHHH----HCCCHHHHHHHHHHHHh
Confidence 3556666643333 235555567777776 44577788888887764
No 191
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=27.49 E-value=1.6e+02 Score=22.05 Aligned_cols=28 Identities=11% Similarity=0.106 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhhcCCCccccHHHHHHHHHHhh
Q 032634 98 KAMEVLVGQMYLSGYGVAEMKKRGMLGLRELP 129 (137)
Q Consensus 98 ~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAA 129 (137)
..+..++|.+|. -..|+.+|..+|++|-
T Consensus 175 ~~~~~~~~~~~~----~~~~~~~A~~~~~~al 202 (434)
T 4b4t_Q 175 VDVHLLESKVYH----KLRNLAKSKASLTAAR 202 (434)
T ss_dssp HHHHHHHHHHHH----HTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HhCcHHHHHHHHHHHH
Confidence 456777777776 4567888888887764
No 192
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=26.87 E-value=66 Score=23.36 Aligned_cols=17 Identities=18% Similarity=0.866 Sum_probs=12.5
Q ss_pred cCchhhhhHHHHHHHHH
Q 032634 72 VPLSQVVSDCVQRWFQD 88 (137)
Q Consensus 72 ~pl~~vv~d~A~~WF~~ 88 (137)
+-|.+.-.||..+||..
T Consensus 38 MnLAGFCRNCLskWy~~ 54 (105)
T 2o35_A 38 MNLAGFCRNCLSNWYRE 54 (105)
T ss_dssp HHHHSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34566677899999984
No 193
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=26.18 E-value=46 Score=27.68 Aligned_cols=35 Identities=9% Similarity=0.131 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHhhcCCC-ccccHHHHHHHHHHhhcC
Q 032634 97 DKAMEVLVGQMYLSGYG-VAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 97 D~~AQ~~LG~MY~~G~G-V~qD~~KA~~Wf~KAAeq 131 (137)
|..|+..||.+|..==+ ---|.++|.+.|++|.+-
T Consensus 198 ~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~L 233 (301)
T 3u64_A 198 EGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRY 233 (301)
T ss_dssp HHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHh
Confidence 56799999999986100 024999999999999763
No 194
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=25.02 E-value=54 Score=24.79 Aligned_cols=27 Identities=15% Similarity=-0.053 Sum_probs=21.5
Q ss_pred HHHHHHHhhcCCCccccHHHHHHHHHHhhcC
Q 032634 101 EVLVGQMYLSGYGVAEMKKRGMLGLRELPQV 131 (137)
Q Consensus 101 Q~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeq 131 (137)
.|.+|.||+ ...|+.+|.++|..|-..
T Consensus 17 ~YYlGr~~~----~~~~y~~A~~~L~~A~~~ 43 (203)
T 3t5x_A 17 KYYVGRKAM----FDSDFKQAEEYLSFAFEH 43 (203)
T ss_dssp HHHHHHHHH----HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH----HHhCHHHHHHHHHHHHHH
Confidence 356788887 778999999999888654
No 195
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=24.27 E-value=1.9e+02 Score=21.25 Aligned_cols=47 Identities=17% Similarity=0.176 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHH--cCCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 82 VQRWFQDTLREAK--NGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 82 A~~WF~~~lkAAe--~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
+.+-|. +..+ .-+.+++|++|..+.. -..+.|.++|+..|+...+.+
T Consensus 17 ~~~~y~---~e~~~~~~~~~~~F~ya~~Lv~-S~~~~~~~~gI~lLe~ll~~~ 65 (152)
T 1pc2_A 17 FEKKFQ---SEKAAGSVSKSTQFEYAWCLVR-SKYNDDIRKGIVLLEELLPKG 65 (152)
T ss_dssp HHHHHH---HHHHTTCCCHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHH---HHHccCCCcHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcC
Confidence 444555 2444 3589999999999987 467779999999999887765
No 196
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=23.77 E-value=85 Score=25.57 Aligned_cols=33 Identities=9% Similarity=-0.148 Sum_probs=27.4
Q ss_pred CCHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhcCC
Q 032634 96 GDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQVD 132 (137)
Q Consensus 96 GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAeqg 132 (137)
.+..+.+.||.+|.. ..|+++|+.|+.+..+.|
T Consensus 98 ~~~~~~~~la~i~~~----~g~~eeAL~~l~~~i~~~ 130 (310)
T 3mv2_B 98 NSPYELYLLATAQAI----LGDLDKSLETCVEGIDND 130 (310)
T ss_dssp CCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHTSS
T ss_pred CCcHHHHHHHHHHHH----cCCHHHHHHHHHHHhccC
Confidence 567777899999985 689999999999986655
No 197
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=21.43 E-value=79 Score=26.40 Aligned_cols=46 Identities=17% Similarity=0.220 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHc--C-----CHHHHHHHHHHhhcCCCccccHHHHHHHHHHhhc
Q 032634 81 CVQRWFQDTLREAKN--G-----DKAMEVLVGQMYLSGYGVAEMKKRGMLGLRELPQ 130 (137)
Q Consensus 81 ~A~~WF~~~lkAAe~--G-----D~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~KAAe 130 (137)
.|...|+.++..-+. | -+.+.++||.+|.+- -++++|...|++|.+
T Consensus 358 eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~q----g~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 358 GALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGL----ENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhc----cCHHHHHHHHHHHHH
Confidence 455556554444332 4 245788999999864 489999999999864
No 198
>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.89 E-value=87 Score=19.59 Aligned_cols=32 Identities=9% Similarity=-0.111 Sum_probs=25.4
Q ss_pred HHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHHH
Q 032634 91 REAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLRE 127 (137)
Q Consensus 91 kAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~K 127 (137)
+..+.|....++..+.....| |.+.|++|+..
T Consensus 15 ~L~~MGF~~~~a~~AL~~t~~-----nve~A~e~L~~ 46 (63)
T 2dak_A 15 TIVSMGFSRDQALKALRATNN-----SLERAVDWIFS 46 (63)
T ss_dssp HHHHHTCCHHHHHHHHHHTTS-----CSHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHcCC-----CHHHHHHHHHh
Confidence 567789888888887777654 78999999865
No 199
>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=20.68 E-value=1.2e+02 Score=19.16 Aligned_cols=32 Identities=9% Similarity=-0.181 Sum_probs=26.2
Q ss_pred HHHHcCCHHHHHHHHHHhhcCCCccccHHHHHHHHH
Q 032634 91 REAKNGDKAMEVLVGQMYLSGYGVAEMKKRGMLGLR 126 (137)
Q Consensus 91 kAAe~GD~~AQ~~LG~MY~~G~GV~qD~~KA~~Wf~ 126 (137)
+..+.|-+..++..+.....| .|.+.|++|+.
T Consensus 25 ~L~~MGF~~~~a~~AL~~t~~----~nve~A~ewL~ 56 (64)
T 2cpw_A 25 VLLSMGFPRARAQKALASTGG----RSVQTACDWLF 56 (64)
T ss_dssp HHHHHTCCHHHHHHHHHHTTT----SCHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHcCC----CCHHHHHHHHH
Confidence 467789888888888887765 68999999986
Done!