Citrus Sinensis ID: 032636

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130------
Protein Sequence
MRNLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC
Secondary Structure (PSIPRED)
cccEEEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccHHHHHHEEEEEEEcccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEcccccccccccccccccccccccccEccccEccHHHHHHHHHHHcccccccccHHHHcHHHHHHHHHHHHHccEcccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
MRNLCYVEEINKYNrycdeqnqqypcvpgkfyygrgpiqltgngdygaagkaigfdglrapetvardpvvsFKTALWFWMTYVhpvmnqgfgATIQRINGAiecggkqpaqvQARNGYYKdycnkfgvapgpnlyc
Flexible Loop (DISEMBL)
MRNLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKfgvapgpnlyc
Low Complexity Region (SEG)
MRNLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC
Disordered region (IsUnstruct)
***LCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAP******
Disordered Region (DISOPRED)
MRNLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC
Disordered Region (DISEMBL)
MRNLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC
Disordered Region (DISPRO)
*RNLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRNLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	136	2.2.26 [Sep-21-2011]
O04138	285	Chitinase 4 OS=Oryza sati	no	no	0.985	0.470	0.659	2e-48
Q7Y1Z0	288	Chitinase 5 OS=Oryza sati	no	no	0.985	0.465	0.644	2e-46
P29022	280	Endochitinase A OS=Zea ma	N/A	no	0.985	0.478	0.611	3e-44
P29023	269	Endochitinase B (Fragment	N/A	no	0.985	0.498	0.597	7e-43
P27054	270	Endochitinase PR4 OS=Phas	N/A	no	0.985	0.496	0.610	7e-42
Q06209	268	Basic endochitinase CHB4	N/A	no	0.977	0.496	0.577	2e-40
Q6K8R2	271	Chitinase 6 OS=Oryza sati	no	no	0.977	0.490	0.558	3e-39
P42820	288	Acidic endochitinase SP2	N/A	no	0.985	0.465	0.583	3e-39
P80052	250	Acidic endochitinase OS=D	N/A	no	0.977	0.532	0.553	1e-35
Q5NB11	290	Chitinase 10 OS=Oryza sat	no	no	0.977	0.458	0.467	3e-32

>sp|O04138|CHI4_ORYSJ Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2

 Score =  190 bits (483), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 89/135 (65%), Positives = 107/135 (79%), Gaps = 1/135 (0%)

Query: 3   NLCYVEEINKYNR-YCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAP 61
           ++CY+ EIN  N  YCD+ N+Q+PC PGK YYGRGP+Q++ N +YG AGK IGFDGLR P
Sbjct: 151 HMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDP 210

Query: 62  ETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKD 121
           + VA+DP +SFKTALWFWM  VH VM+QGFGATI+ INGA+EC GK P  V AR  YYKD
Sbjct: 211 DKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKD 270

Query: 122 YCNKFGVAPGPNLYC 136
           YC +FGV+PG NLYC
Sbjct: 271 YCRQFGVSPGGNLYC 285

Hydrolyzes chitin and may function in reproductive organs during embryogenesis and seed maturation.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 4

>sp|Q7Y1Z0|CHI5_ORYSJ Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1

 Score =  184 bits (466), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 87/135 (64%), Positives = 105/135 (77%), Gaps = 1/135 (0%)

Query: 3   NLCYVEEINKYN-RYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAP 61
           ++CY+ EIN  +  YCD+ N+Q+PC PGK YYGRGP+Q++ N +YG AG+ IGFDGLR P
Sbjct: 154 HMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDP 213

Query: 62  ETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKD 121
           + VA+DP +SFKTALWFWM  VH VM QGFGATI+ INGA+EC GK P  V AR  YYKD
Sbjct: 214 DRVAQDPTISFKTALWFWMNNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKD 273

Query: 122 YCNKFGVAPGPNLYC 136
           YC +FGV PG NLYC
Sbjct: 274 YCRQFGVDPGGNLYC 288

May function in reproductive organs during embryogenesis and seed maturation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P29022|CHIA_MAIZE Endochitinase A OS=Zea mays PE=1 SV=1

 Score =  176 bits (447), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 82/134 (61%), Positives = 100/134 (74%)

Query: 3   NLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPE 62
           + CY+ EINK N YCD  N+Q+PC  G+ YYGRGP+Q++ N +YG AG+ IGF+GL  P 
Sbjct: 147 HFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPN 206

Query: 63  TVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDY 122
            VA+D V++FKTALWFWM  VH VM QGFGATI+ INGA+EC G  PAQ+ AR GYYK Y
Sbjct: 207 RVAQDAVIAFKTALWFWMNNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQY 266

Query: 123 CNKFGVAPGPNLYC 136
           C +  V PGPNL C
Sbjct: 267 CQQLRVDPGPNLIC 280

Defense against chitin containing fungal pathogens.

Zea mays (taxid: 4577)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P29023|CHIB_MAIZE Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1

 Score =  172 bits (435), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 80/134 (59%), Positives = 98/134 (73%)

Query: 3   NLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPE 62
           + CY+ EINK N YCD   +Q+PC  G+ YYGRGP+Q++ N +YG AG+AIGFDGL  P 
Sbjct: 136 HFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPG 195

Query: 63  TVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDY 122
            VARD VV+FK ALWFWM  VH V+ QGFGAT + +  A+ECGG  PAQ+ AR GYY+ Y
Sbjct: 196 RVARDAVVAFKAALWFWMNSVHGVVPQGFGATTRAMQRALECGGNNPAQMNARVGYYRQY 255

Query: 123 CNKFGVAPGPNLYC 136
           C + GV PGPNL C
Sbjct: 256 CRQLGVDPGPNLTC 269

Defense against chitin containing fungal pathogens.

Zea mays (taxid: 4577)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P27054|CHI4_PHAVU Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1

 Score =  169 bits (427), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 83/136 (61%), Positives = 101/136 (74%), Gaps = 2/136 (1%)

Query: 3   NLCYVEEINKYNR-YCDEQN-QQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRA 60
           + CY+EEI+  ++ YCDE++  QYPC   K Y+GRGPIQL+ N +YG AG A  FDGL A
Sbjct: 135 HFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGA 194

Query: 61  PETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYK 120
           PETV+ D VVSFKTALW+WM +V PV+NQGFGATI+ INGA+EC G  P  VQAR  YY 
Sbjct: 195 PETVSNDVVVSFKTALWYWMQHVRPVINQGFGATIRAINGALECDGANPTTVQARVNYYT 254

Query: 121 DYCNKFGVAPGPNLYC 136
           +YC + GVA G NL C
Sbjct: 255 EYCRQLGVATGDNLTC 270

Defense against chitin containing fungal pathogens.

Phaseolus vulgaris (taxid: 3885)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q06209|CHI4_BRANA Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2

 Score =  164 bits (414), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 78/135 (57%), Positives = 98/135 (72%), Gaps = 2/135 (1%)

Query: 3   NLCYVEEINKYNR-YCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAP 61
           + CY+EEIN  +R YCDE N+QYPC PGK Y+GRGPIQL+ N +YGA G+++  + L  P
Sbjct: 135 HFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQP 194

Query: 62  ETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKD 121
           E V+ +P V+F+T LWFWM  V PV+NQGFGATI+ ING +EC G     V AR  YY+D
Sbjct: 195 ELVSSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAING-MECNGGNSGAVNARIRYYRD 253

Query: 122 YCNKFGVAPGPNLYC 136
           YC + GV PGPNL C
Sbjct: 254 YCGQLGVDPGPNLSC 268

Defense against chitin containing fungal pathogens.

Brassica napus (taxid: 3708)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q6K8R2|CHI6_ORYSJ Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1

 Score =  160 bits (404), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 76/136 (55%), Positives = 99/136 (72%), Gaps = 3/136 (2%)

Query: 4   LCYVEEINKYNR-YCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPE 62
            CY+EEI+  ++ YCDE + Q+PC+ GK YYGRGP+Q++ N +YG AG++IGFDGL  P+
Sbjct: 136 FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPD 195

Query: 63  TVARDPVVSFKTALWFWMTYVHP--VMNQGFGATIQRINGAIECGGKQPAQVQARNGYYK 120
            VAR PV++F+TALW+W   VH   V  QGFGATI+ INGA+EC GK P  V  R  YY+
Sbjct: 196 AVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVAYYQ 255

Query: 121 DYCNKFGVAPGPNLYC 136
            +C +FGV PG NL C
Sbjct: 256 QFCQQFGVDPGSNLTC 271

May function in reproductive organs during embryogenesis and seed maturation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P42820|CHIP_BETVU Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1

 Score =  159 bits (403), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 80/137 (58%), Positives = 95/137 (69%), Gaps = 3/137 (2%)

Query: 3   NLCYVEEINKY--NRYCD-EQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLR 59
           NLC++EE +    + YCD ++  QYPC  GK YYGRGP+QL+ N +Y  AG+AIGFDGL 
Sbjct: 152 NLCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLG 211

Query: 60  APETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYY 119
            PE VA D   SFK A+WFWMT VH VMNQGFGAT + INGA+EC G+   Q   R  +Y
Sbjct: 212 NPEKVATDVNTSFKAAMWFWMTNVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFY 271

Query: 120 KDYCNKFGVAPGPNLYC 136
           K YC  FGVAPG NL C
Sbjct: 272 KKYCADFGVAPGDNLTC 288

Defense against chitin containing fungal pathogens.

Beta vulgaris (taxid: 161934)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P80052|CHIT_DIOJA Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2

 Score =  148 bits (373), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 77/139 (55%), Positives = 98/139 (70%), Gaps = 6/139 (4%)

Query: 3   NLCYVEEINKY-NRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAP 61
           +LCY+EE + + N YC E +QQYPC P K Y+GRGP+QL+ N +Y  AGK + FDGL  P
Sbjct: 113 HLCYIEERDGHANNYCQE-SQQYPCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDP 171

Query: 62  ETVARDPVVSFKTALWFWM----TYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNG 117
           + V RDP++SFKT+LWFW+     YV    NQGFGATI+ ING  EC G   AQ+ AR G
Sbjct: 172 DIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQECDGHNTAQMMARVG 231

Query: 118 YYKDYCNKFGVAPGPNLYC 136
           YY++YC + GV+PG NL C
Sbjct: 232 YYQEYCAQLGVSPGNNLPC 250

Defense against chitin containing fungal pathogens.

Dioscorea japonica (taxid: 4673)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q5NB11|CHI10_ORYSJ Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1

 Score =  136 bits (343), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 72/154 (46%), Positives = 90/154 (58%), Gaps = 21/154 (13%)

Query: 4   LCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPET 63
           LCY EEIN  + YCD  ++Q+PC PGK Y+GRGPIQ++ N +YG AG+A+GFDGLR PE 
Sbjct: 131 LCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEI 190

Query: 64  VARDPVVSFKTALWFWMT------YVHPVM---------------NQGFGATIQRINGAI 102
           VA    ++F+TALWFWMT        H VM                 GFG     +NG +
Sbjct: 191 VANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGL 250

Query: 103 ECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
           EC     A+V  R G+Y+ YC   GV  GPNL C
Sbjct: 251 ECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDC 284

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
3608477	231	chitinase CHI1 [Citrus sinensis]	0.985	0.580	0.925	1e-69
330367520	183	basic chitinase [Citrus jambhiri]	0.911	0.677	0.911	1e-62
269927197	227	chitinase [Dimocarpus longan]	0.985	0.590	0.738	6e-55
189014948	240	chitinase [Mangifera indica]	0.904	0.512	0.747	6e-49
115459168	229	Os04g0493400 [Oryza sativa Japonica Grou	0.985	0.585	0.659	3e-47
224121824	275	predicted protein [Populus trichocarpa]	0.985	0.487	0.681	3e-47
374719241	275	chitinase 7 [Populus x canadensis]	0.985	0.487	0.681	4e-47
344190188	273	class IV chitinase [Corylus heterophylla	0.977	0.487	0.694	9e-47
224146530	270	predicted protein [Populus trichocarpa]	0.985	0.496	0.688	1e-46
259585967	285	RecName: Full=Chitinase 4; AltName: Full	0.985	0.470	0.659	2e-46

>gi|3608477|gb|AAC35981.1| chitinase CHI1 [Citrus sinensis]

 Score =  266 bits (681), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 124/134 (92%), Positives = 130/134 (97%)

Query: 3   NLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPE 62
           +LCY+EEINK NRYCDEQN+QYPCVPGKFYYGRGPIQLTGNG+YGAAGKAIGFDGLRAPE
Sbjct: 98  HLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPE 157

Query: 63  TVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDY 122
           TVA+DPVVSFKTALWFWMT VHPVMNQGFGATIQRINGA+ECGGKQPAQVQAR GYYKDY
Sbjct: 158 TVAKDPVVSFKTALWFWMTNVHPVMNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDY 217

Query: 123 CNKFGVAPGPNLYC 136
           CNKFGVAPGPNL C
Sbjct: 218 CNKFGVAPGPNLSC 231

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|330367520|dbj|BAK19488.1| basic chitinase [Citrus jambhiri]

 Score =  243 bits (621), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 113/124 (91%), Positives = 121/124 (97%)

Query: 3   NLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPE 62
           +LCY+EEINK NRYCDEQN+QYPCVPGKFYYGRGPIQLTGNG+YGAAGKAIGFDGLRAPE
Sbjct: 60  HLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPE 119

Query: 63  TVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDY 122
           TVA+DPVVSFKTA+WFWMT VHPV+NQGFGATIQRINGA+ECGGKQPAQVQAR GYYKDY
Sbjct: 120 TVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDY 179

Query: 123 CNKF 126
           CNKF
Sbjct: 180 CNKF 183

Source: Citrus jambhiri

Species: Citrus jambhiri

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|269927197|gb|ACZ52964.1| chitinase [Dimocarpus longan]

 Score =  218 bits (555), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 99/134 (73%), Positives = 114/134 (85%)

Query: 3   NLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPE 62
           +LCYVEEI+K N YCD    QYPC PGKFYYGRGP+QLT N +YGAAG+AIGFDGL +PE
Sbjct: 94  HLCYVEEIDKSNNYCDPSYTQYPCAPGKFYYGRGPLQLTWNYNYGAAGQAIGFDGLNSPE 153

Query: 63  TVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDY 122
           TVA DP ++FKTALWFWMT VH V+NQGFGATI++INGA+EC GK+PA+VQAR GYY DY
Sbjct: 154 TVANDPAIAFKTALWFWMTNVHSVVNQGFGATIRKINGAVECDGKEPAKVQARIGYYTDY 213

Query: 123 CNKFGVAPGPNLYC 136
           C KFGV+PG NL C
Sbjct: 214 CQKFGVSPGENLSC 227

Source: Dimocarpus longan

Species: Dimocarpus longan

Genus: Dimocarpus

Family: Sapindaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|189014948|gb|ACD69683.1| chitinase [Mangifera indica]

 Score =  198 bits (503), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 92/123 (74%), Positives = 102/123 (82%)

Query: 3   NLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPE 62
           +LCY EEI+K N YCD+ N QYPCVPGK YYGRGP+QLT N +YGA G A+GFDGL APE
Sbjct: 118 HLCYTEEIDKSNAYCDQSNTQYPCVPGKKYYGRGPMQLTWNYNYGACGTAVGFDGLNAPE 177

Query: 63  TVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDY 122
           TV+ DP VSFK ALWFWMT VH VMNQGFGATIQ+INGA+ECGGKQP +V AR GYY DY
Sbjct: 178 TVSNDPAVSFKAALWFWMTNVHSVMNQGFGATIQKINGALECGGKQPDKVNARIGYYTDY 237

Query: 123 CNK 125
           C K
Sbjct: 238 CQK 240

Source: Mangifera indica

Species: Mangifera indica

Genus: Mangifera

Family: Anacardiaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115459168|ref|NP_001053184.1| Os04g0493400 [Oryza sativa Japonica Group] gi|2055262|dbj|BAA19793.1| chitinase IIb [Oryza sativa Japonica Group] gi|12407240|dbj|BAB21374.1| PR-3 class IV chitinase [Oryza sativa Japonica Group] gi|12407242|dbj|BAB21377.1| PR-3 class IV chitinase [Oryza sativa Indica Group] gi|113564755|dbj|BAF15098.1| Os04g0493400 [Oryza sativa Japonica Group] gi|125548867|gb|EAY94689.1| hypothetical protein OsI_16467 [Oryza sativa Indica Group] gi|125590856|gb|EAZ31206.1| hypothetical protein OsJ_15306 [Oryza sativa Japonica Group] gi|215712256|dbj|BAG94383.1| unnamed protein product [Oryza sativa Japonica Group] gi|215765725|dbj|BAG87422.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  192 bits (489), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 89/135 (65%), Positives = 107/135 (79%), Gaps = 1/135 (0%)

Query: 3   NLCYVEEINKYNR-YCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAP 61
           ++CY+ EIN  N  YCD+ N+Q+PC PGK YYGRGP+Q++ N +YG AGK IGFDGLR P
Sbjct: 95  HMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDP 154

Query: 62  ETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKD 121
           + VA+DP +SFKTALWFWM  VH VM+QGFGATI+ INGA+EC GK P  V AR  YYKD
Sbjct: 155 DKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKD 214

Query: 122 YCNKFGVAPGPNLYC 136
           YC +FGV+PG NLYC
Sbjct: 215 YCRQFGVSPGGNLYC 229

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121824|ref|XP_002330662.1| predicted protein [Populus trichocarpa] gi|222872266|gb|EEF09397.1| predicted protein [Populus trichocarpa]

 Score =  192 bits (488), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 92/135 (68%), Positives = 107/135 (79%), Gaps = 1/135 (0%)

Query: 3   NLCYVEEINKYNR-YCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAP 61
           + CY+EEIN  +R YCDE N QYPC P K YYGRGPIQL+ N +YG AG++IGFDGL +P
Sbjct: 141 HFCYIEEINGPSRDYCDEGNTQYPCNPDKGYYGRGPIQLSWNFNYGPAGESIGFDGLNSP 200

Query: 62  ETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKD 121
           ETVA DPV+SFKTALW+W   V PV++QGFGATI+ INGA+EC G  PA VQAR GYY D
Sbjct: 201 ETVANDPVISFKTALWYWTNSVQPVISQGFGATIRAINGALECDGANPATVQARVGYYTD 260

Query: 122 YCNKFGVAPGPNLYC 136
           YCN+ GVAPG NL C
Sbjct: 261 YCNQLGVAPGDNLTC 275

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|374719241|gb|AEZ67306.1| chitinase 7 [Populus x canadensis]

 Score =  192 bits (487), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 92/135 (68%), Positives = 107/135 (79%), Gaps = 1/135 (0%)

Query: 3   NLCYVEEINKYNR-YCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAP 61
           + CY+EEIN  +R YCDE N QYPC P K YYGRGPIQL+ N +YG AG++IGFDGL +P
Sbjct: 141 HFCYIEEINGPSRDYCDEGNTQYPCNPDKGYYGRGPIQLSWNFNYGPAGESIGFDGLNSP 200

Query: 62  ETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKD 121
           ETVA DPV+SFKTALW+W   V PV++QGFGATI+ INGA+EC G  PA VQAR GYY D
Sbjct: 201 ETVANDPVISFKTALWYWTNSVQPVISQGFGATIRAINGALECDGANPATVQARVGYYTD 260

Query: 122 YCNKFGVAPGPNLYC 136
           YCN+ GVAPG NL C
Sbjct: 261 YCNQLGVAPGDNLTC 275

Source: Populus x canadensis

Species: Populus x canadensis

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|344190188|gb|AEM97876.1| class IV chitinase [Corylus heterophylla]

 Score =  191 bits (485), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 93/134 (69%), Positives = 104/134 (77%), Gaps = 1/134 (0%)

Query: 4   LCYVEEINKYNR-YCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPE 62
           LC +EE N  ++ YCDE N QYPC P K YYGRGP+QLT N +YGAAG +IGFDGL APE
Sbjct: 140 LCKIEETNGASQDYCDENNTQYPCNPAKKYYGRGPLQLTWNYNYGAAGNSIGFDGLNAPE 199

Query: 63  TVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDY 122
           TVA D VVSFKTALWFWMT VH V+ QGFGAT + INGA+EC GK+P  VQAR  YY  Y
Sbjct: 200 TVATDAVVSFKTALWFWMTNVHSVIGQGFGATTRAINGAVECDGKRPDLVQARINYYTQY 259

Query: 123 CNKFGVAPGPNLYC 136
           CN+FGVAPG NL C
Sbjct: 260 CNQFGVAPGDNLSC 273

Source: Corylus heterophylla

Species: Corylus heterophylla

Genus: Corylus

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224146530|ref|XP_002326040.1| predicted protein [Populus trichocarpa] gi|222862915|gb|EEF00422.1| predicted protein [Populus trichocarpa]

 Score =  191 bits (484), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 93/135 (68%), Positives = 104/135 (77%), Gaps = 1/135 (0%)

Query: 3   NLCYVEEIN-KYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAP 61
           + CY+EEIN   + YCDE N QYPC P K Y+GRGP+QLT N +YGAAG A  FDGL +P
Sbjct: 136 HFCYIEEINGASHDYCDETNTQYPCNPNKNYFGRGPLQLTWNYNYGAAGGANNFDGLNSP 195

Query: 62  ETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKD 121
           ETVA DPVVSFKTALWFWMT V PV+ QGFGATI+ INGA+EC G     VQAR GYY D
Sbjct: 196 ETVANDPVVSFKTALWFWMTNVRPVVTQGFGATIRAINGAVECNGGNSGAVQARIGYYTD 255

Query: 122 YCNKFGVAPGPNLYC 136
           YCN+FGVAPG NL C
Sbjct: 256 YCNQFGVAPGDNLSC 270

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|259585967|sp|O04138.2|CHI4_ORYSJ RecName: Full=Chitinase 4; AltName: Full=OsChia2b; AltName: Full=Pathogenesis related (PR)-3 chitinase 4; Flags: Precursor gi|38345417|emb|CAD41540.2| OSJNBb0091E11.8 [Oryza sativa Japonica Group] gi|90265173|emb|CAH67741.1| H0522A01.12 [Oryza sativa Indica Group] gi|116634835|emb|CAH67285.1| OSIGBa0103O01.3 [Oryza sativa Indica Group]

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 89/135 (65%), Positives = 107/135 (79%), Gaps = 1/135 (0%)

Query: 3   NLCYVEEINKYNR-YCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAP 61
           ++CY+ EIN  N  YCD+ N+Q+PC PGK YYGRGP+Q++ N +YG AGK IGFDGLR P
Sbjct: 151 HMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDP 210

Query: 62  ETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKD 121
           + VA+DP +SFKTALWFWM  VH VM+QGFGATI+ INGA+EC GK P  V AR  YYKD
Sbjct: 211 DKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKD 270

Query: 122 YCNKFGVAPGPNLYC 136
           YC +FGV+PG NLYC
Sbjct: 271 YCRQFGVSPGGNLYC 285

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
UNIPROTKB|O04138	285	Cht4 "Chitinase 4" [Oryza sati	0.985	0.470	0.659	3.2e-49
TAIR|locus:2096159	273	EP3 "homolog of carrot EP3-3 c	0.985	0.490	0.644	7.1e-45
TAIR|locus:2043994	264	AT2G43590 [Arabidopsis thalian	0.977	0.503	0.592	3.2e-42
TAIR|locus:2044009	265	AT2G43580 [Arabidopsis thalian	0.977	0.501	0.548	1.8e-39
TAIR|locus:2043934	281	AT2G43610 [Arabidopsis thalian	0.963	0.466	0.559	3.9e-37
TAIR|locus:2043919	283	AT2G43620 [Arabidopsis thalian	0.963	0.462	0.529	5.7e-36
TAIR|locus:2204918	272	AT1G02360 [Arabidopsis thalian	0.602	0.301	0.573	7.1e-34
TAIR|locus:2133412	280	AT4G01700 [Arabidopsis thalian	0.602	0.292	0.585	6.2e-33
UNIPROTKB|Q9FRV0	266	rscc "Basic endochitinase C" [	0.588	0.300	0.592	5.5e-32
TAIR|locus:2044024	277	CHI ""chitinase, putative"" [A	0.970	0.476	0.489	9.8e-32

UNIPROTKB|O04138 Cht4 "Chitinase 4" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
 Identities = 89/135 (65%), Positives = 107/135 (79%)

Query:     3 NLCYVEEINKYNR-YCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAP 61
             ++CY+ EIN  N  YCD+ N+Q+PC PGK YYGRGP+Q++ N +YG AGK IGFDGLR P
Sbjct:   151 HMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDP 210

Query:    62 ETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKD 121
             + VA+DP +SFKTALWFWM  VH VM+QGFGATI+ INGA+EC GK P  V AR  YYKD
Sbjct:   211 DKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKD 270

Query:   122 YCNKFGVAPGPNLYC 136
             YC +FGV+PG NLYC
Sbjct:   271 YCRQFGVSPGGNLYC 285

GO:0004568 "chitinase activity" evidence=IDA

TAIR|locus:2096159 EP3 "homolog of carrot EP3-3 chitinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 87/135 (64%), Positives = 101/135 (74%)

Query:     3 NLCYVEEINKYNR-YCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAP 61
             + CY+EEI+  ++ YCDE   QYPC P K YYGRGPIQL+ N +YG AG AIGFDGL AP
Sbjct:   139 HFCYIEEIDGASKDYCDENATQYPCNPNKGYYGRGPIQLSWNFNYGPAGTAIGFDGLNAP 198

Query:    62 ETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKD 121
             ETVA DPV+SFKTALW+W   V PV++QGFGATI+ INGA+EC G   A VQAR  YY D
Sbjct:   199 ETVATDPVISFKTALWYWTNRVQPVISQGFGATIRAINGALECDGANTATVQARVRYYTD 258

Query:   122 YCNKFGVAPGPNLYC 136
             YC + GV PG NL C
Sbjct:   259 YCRQLGVDPGNNLTC 273

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0008061 "chitin binding" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0010262 "somatic embryogenesis" evidence=IEP

GO:0005618 "cell wall" evidence=IDA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

GO:0009626 "plant-type hypersensitive response" evidence=TAS

TAIR|locus:2043994 AT2G43590 [Arabidopsis thaliana (taxid:3702)]

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 80/135 (59%), Positives = 96/135 (71%)

Query:     3 NLCYVEEINKYNR-YCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAP 61
             + CY+EEIN   R YC   N QYPC PGK Y+GRGPIQL+ N +YGA G+++G D LR P
Sbjct:   131 HFCYIEEINGATRNYCQSSNTQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLGLDLLRQP 190

Query:    62 ETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKD 121
             E V  +P V+F+T LWFWM  V PV+NQGFGATI+ ING +EC G     V AR GYY+D
Sbjct:   191 ELVGSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAING-MECNGGNSGAVNARIGYYRD 249

Query:   122 YCNKFGVAPGPNLYC 136
             YC + GV PGPNL C
Sbjct:   250 YCGQLGVDPGPNLSC 264

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0008061 "chitin binding" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

TAIR|locus:2044009 AT2G43580 [Arabidopsis thaliana (taxid:3702)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 74/135 (54%), Positives = 99/135 (73%)

Query:     3 NLCYVEEINKYNRY-CDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAP 61
             + CY+EEIN  +R  CD+ N+QYPC P K Y+GRGP+ L+ N +YGA G+++G D LR P
Sbjct:   132 HFCYIEEINGASRVMCDQNNRQYPCAPAKSYHGRGPLLLSWNFNYGACGQSLGLDLLRQP 191

Query:    62 ETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKD 121
             E V+ +PVV+F+TALWFWM  V PV+NQGFGATI+ I+G  +C G+    V AR GYY+D
Sbjct:   192 ELVSSNPVVAFRTALWFWMKSVRPVLNQGFGATIRAISG-FDCDGRNLGGVNARIGYYRD 250

Query:   122 YCNKFGVAPGPNLYC 136
             YC + G+ PG N+ C
Sbjct:   251 YCGQLGLDPGANITC 265

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0008061 "chitin binding" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

TAIR|locus:2043934 AT2G43610 [Arabidopsis thaliana (taxid:3702)]

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 75/134 (55%), Positives = 92/134 (68%)

Query:     3 NLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPE 62
             + CY EEI +  RYC      YPC PGK YYGRGPIQ+T N +YGAAGK +G   L+ P+
Sbjct:   151 SFCYKEEIAR-GRYCSPSTT-YPCQPGKNYYGRGPIQITWNYNYGAAGKFLGLPLLKDPD 208

Query:    63 TVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDY 122
              VAR P V+F+ A+WFW   V PV++QGFGAT +RING  EC G +PA VQ+R  +Y D+
Sbjct:   209 MVARSPTVAFQCAMWFWNKNVRPVLSQGFGATTRRINGG-ECNGGRPAAVQSRVNHYLDF 267

Query:   123 CNKFGVAPGPNLYC 136
             C K GV PG NL C
Sbjct:   268 CKKLGVTPGTNLSC 281

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0008061 "chitin binding" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2043919 AT2G43620 [Arabidopsis thaliana (taxid:3702)]

 Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
 Identities = 71/134 (52%), Positives = 91/134 (67%)

Query:     3 NLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPE 62
             + CY EEI +  +YC      YPC PGK YYGRGPIQ+T N +YGAAGK +G   L  P+
Sbjct:   153 SFCYKEEIAR-GKYCSPSTA-YPCTPGKDYYGRGPIQITWNYNYGAAGKFLGLPLLTDPD 210

Query:    63 TVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIECGGKQPAQVQARNGYYKDY 122
              VAR P V+F+ A+WFW   V PV++QGFGAT ++ING  EC G++PA VQ+R  YY ++
Sbjct:   211 MVARSPQVAFQCAMWFWNLNVRPVLDQGFGATTRKINGG-ECNGRRPAAVQSRVNYYLEF 269

Query:   123 CNKFGVAPGPNLYC 136
             C   G+ PG NL C
Sbjct:   270 CRTLGITPGANLSC 283

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0008061 "chitin binding" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0048046 "apoplast" evidence=IDA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2204918 AT1G02360 [Arabidopsis thaliana (taxid:3702)]

 Score = 276 (102.2 bits), Expect = 7.1e-34, Sum P(2) = 7.1e-34
 Identities = 47/82 (57%), Positives = 62/82 (75%)

Query:     4 LCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPET 63
             LC+ EE++  + YCD  + Q+PC P K Y GRGPIQL+ N +YG AG+A+GFDGLR PET
Sbjct:   112 LCFKEEVSPQSTYCDSSDTQWPCFPNKTYQGRGPIQLSWNYNYGPAGRALGFDGLRNPET 171

Query:    64 VARDPVVSFKTALWFWMTYVHP 85
             V+ + V++F+TALWFWMT   P
Sbjct:   172 VSNNSVIAFQTALWFWMTPQSP 193

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0050832 "defense response to fungus" evidence=IEP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2133412 AT4G01700 [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
 Identities = 48/82 (58%), Positives = 62/82 (75%)

Query:     4 LCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPET 63
             LC+ EE++  + YCD  N+ +PCV GK Y GRGPIQL+ N +YG AG+A+GFDGL+ PE 
Sbjct:   120 LCFKEEVSPQSNYCDASNKDWPCVSGKSYKGRGPIQLSWNYNYGQAGRALGFDGLQNPEL 179

Query:    64 VARDPVVSFKTALWFWMTYVHP 85
             VA + V++FKTALWFWMT   P
Sbjct:   180 VANNSVLAFKTALWFWMTEQTP 201

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0005618 "cell wall" evidence=IDA

GO:0050832 "defense response to fungus" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

UNIPROTKB|Q9FRV0 rscc "Basic endochitinase C" [Secale cereale (taxid:4550)]

 Score = 249 (92.7 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
 Identities = 48/81 (59%), Positives = 56/81 (69%)

Query:     5 CYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETV 64
             C+ +E      YC   + Q+PC PGK YYGRGPIQL+ N +YG AG+AIG D LR P+ V
Sbjct:   108 CFKQERGAAADYCTP-SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLV 166

Query:    65 ARDPVVSFKTALWFWMTYVHP 85
             A DP VSFKTALWFWMT   P
Sbjct:   167 ATDPTVSFKTALWFWMTAQAP 187

GO:0004568 "chitinase activity" evidence=IDA

GO:0005576 "extracellular region" evidence=IC

GO:0016998 "cell wall macromolecule catabolic process" evidence=IDA

GO:0050832 "defense response to fungus" evidence=IDA

TAIR|locus:2044024 CHI ""chitinase, putative"" [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 68/139 (48%), Positives = 87/139 (62%)

Query:     4 LCYVEEIN-----KYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGL 58
             +CY+EEI+         YCD +  ++PC  GK YYGRG IQL+ N +YG  GKA+  + L
Sbjct:   140 MCYIEEIDGPAKAASGEYCDTEKPEFPCAQGKGYYGRGAIQLSWNYNYGLCGKALDENLL 199

Query:    59 RAPETVARDPVVSFKTALWFWMTYVHPVMNQGFGATIQRINGAIEC-GGKQPAQVQARNG 117
              +PE VA+D V++FKTA WFW T V      GFGATI+ +N   EC GG   A+   R  
Sbjct:   200 ASPEKVAQDQVLAFKTAFWFWTTNVRTSFKSGFGATIRAVNSR-ECSGGDSTAKAANRIK 258

Query:   118 YYKDYCNKFGVAPGPNLYC 136
             Y++DYC K GVAPG NL C
Sbjct:   259 YFQDYCGKLGVAPGDNLTC 277

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0008061 "chitin binding" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.2.1.14	0.824
3rd Layer	3.2.1	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: 4336263 CHIT2 - Chitinase family protein precursor, expressed; Hydrolyzes chitin and may function in reproductive organs during embryogenesis and seed maturation (229 aa) (Oryza sativa Japonica)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	136
cd00325	230	cd00325, chitinase_glyco_hydro_19, Glycoside hydro	1e-64
pfam00182	232	pfam00182, Glyco_hydro_19, Chitinase class I	8e-60
cd00442	105	cd00442, lysozyme_like, lysozyme_like domain	5e-10
COG3179	206	COG3179, COG3179, Predicted chitinase [General fun	4e-07

>gnl|CDD|238199 cd00325, chitinase_glyco_hydro_19, Glycoside hydrolase family 19 chitinase domain

 Score =  195 bits (499), Expect = 1e-64
 Identities = 79/154 (51%), Positives = 89/154 (57%), Gaps = 23/154 (14%)

Query: 4   LCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPET 63
            C   E    + YCD    Q+PC PGK YYGRGPIQL+ N +YG AGKA+GFD L  P+ 
Sbjct: 79  YCDKSETGPPSSYCD--PAQWPCAPGKKYYGRGPIQLSWNYNYGPAGKALGFDLLNNPDL 136

Query: 64  VARDPVVSFKTALWFWMTYVHP---------------------VMNQGFGATIQRINGAI 102
           VA DPVVSFKTA+WFWMT   P                         GFGAT   ING +
Sbjct: 137 VATDPVVSFKTAIWFWMTPQGPKPSCHDVITGTWTPSAADTAAGRGPGFGATTNIINGGL 196

Query: 103 ECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
           ECGG  P QVQ R GYYK YC+  GV+PG NL C
Sbjct: 197 ECGGGNPDQVQNRIGYYKRYCDMLGVSPGDNLDC 230

Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. Length = 230

>gnl|CDD|201064 pfam00182, Glyco_hydro_19, Chitinase class I

 Score =  183 bits (467), Expect = 8e-60
 Identities = 77/156 (49%), Positives = 93/156 (59%), Gaps = 22/156 (14%)

Query: 2   RNLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAP 61
              C+V E N  + YC   + Q+PC PGK YYGRGPIQL+ N +YG AG+AIGFD L  P
Sbjct: 78  WGYCFVREQNPPSDYCT-PSAQWPCAPGKKYYGRGPIQLSWNYNYGPAGQAIGFDLLNNP 136

Query: 62  ETVARDPVVSFKTALWFWMT------YVHPVMNQ---------------GFGATIQRING 100
           + VA DPV+SFKTALWFWMT        H V+                 GFG     ING
Sbjct: 137 DLVATDPVISFKTALWFWMTPQSPKPSCHDVITGQWTPSAADSAAGRVPGFGVITNIING 196

Query: 101 AIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
            +ECGG   A+VQ R G+YK YC++ GV+PG NL C
Sbjct: 197 GLECGGGNNARVQDRIGFYKRYCDQLGVSPGNNLDC 232

Length = 232

>gnl|CDD|238249 cd00442, lysozyme_like, lysozyme_like domain

 Score = 53.0 bits (127), Expect = 5e-10
 Identities = 19/78 (24%), Positives = 24/78 (30%)

Query: 25  PCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMTYVH 84
              PG+  YG G  QLT         + IG   L        +P V  K AL        
Sbjct: 24  TLNPGERGYGIGLYQLTSRWSDAYRARGIGLKLLAQLILKLFNPKVQDKQALQQIKNAGA 83

Query: 85  PVMNQGFGATIQRINGAI 102
            +M+        R    I
Sbjct: 84  LIMSSFRSRGAVRQLILI 101

This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides. Length = 105

>gnl|CDD|225720 COG3179, COG3179, Predicted chitinase [General function prediction only]

 Score = 46.7 bits (111), Expect = 4e-07
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)

Query: 29  GKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMTY-VHPVM 87
           G  Y GRG IQ+TG  +Y   G+A+G D +  P  +  DP  + + A W+W T  ++ + 
Sbjct: 113 GWLYRGRGLIQITGRDNYRRCGRALGLDLVANPGQLELDP-HAARVAAWYWKTRGLNALA 171

Query: 88  NQGFGATI-QRINGA 101
           ++G    + ++ING 
Sbjct: 172 DEGDLVRVTRKINGG 186

Length = 206

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	136
cd00325	230	chitinase_glyco_hydro_19 Glycoside hydrolase famil	100.0
PF00182	232	Glyco_hydro_19: Chitinase class I; InterPro: IPR00	100.0
KOG4742	286	consensus Predicted chitinase [General function pr	100.0
COG3179	206	Predicted chitinase [General function prediction o	99.94
cd00442	105	lysozyme_like lysozyme_like domain. This contains	99.25

>cd00325 chitinase_glyco_hydro_19 Glycoside hydrolase family 19 chitinase domain

Probab=100.00  E-value=1.4e-46  Score=295.04  Aligned_cols=136  Identities=60%  Similarity=1.133  Sum_probs=121.9

Q ss_pred             CCCceeeEeecCC-CCcccCCC----------CCCcCCCCCcccccccccccChhHHHHHHHHhCCCCCCCccccccCch
Q 032636            1 MRNLCYVEEINKY-NRYCDEQN----------QQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPV   69 (136)
Q Consensus         1 sg~~~y~~E~~~~-~~y~~~~~----------~~~~~~dG~~Y~GRG~iQLTg~~NY~~~~~~~g~dl~~~Pdlva~d~~   69 (136)
                      ||+|+|++|+... ..||+...          ++|||+||++|+|||+|||||++||++|++++++|||+|||+|++||.
T Consensus        63 Tgg~~~~~e~~~~~~g~c~~~e~~~~~~~~~~~~~pc~dG~~Y~GRG~iQLT~~~NY~~~g~~lg~dll~~Pdlva~dp~  142 (230)
T cd00325          63 TGGGCYIAPDGPYAWGYCDKSETGPPSSYCDPAQWPCAPGKKYYGRGPIQLSWNYNYGPAGKALGFDLLNNPDLVATDPV  142 (230)
T ss_pred             CCCCccccccccccCCccccccCCCcccccccCCCCCCcccccccCCceeeeehhhHHHHHHHhCCccccCHHHHhcCch
Confidence            6788888887543 24664421          578999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHh------hhhhhh---------------ccchhhhhhhhcCccccCCCChhhHHHHHHHHHHHHHHcCC
Q 032636           70 VSFKTALWFWMT------YVHPVM---------------NQGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGV  128 (136)
Q Consensus        70 ~a~~sa~wfW~~------~~~~~~---------------~~~f~~~t~~INGgl~c~~~~~~~~~~R~~~y~~~~~~lgv  128 (136)
                      +|+++|+||||+      ++|++|               .++|+.||+|||||+||.++..+++++|+++|++++++|||
T Consensus       143 ~a~~sA~WfW~t~~~~k~s~h~vi~g~w~p~~~d~a~~~~~gfg~tt~iINGg~EC~~~~~~~~~~Ri~~Y~~~~~~lgv  222 (230)
T cd00325         143 VSFKTAIWFWMTPQGPKPSCHDVITGTWTPSAADTAAGRGPGFGATTNIINGGLECGGGNPDQVQNRIGYYKRYCDMLGV  222 (230)
T ss_pred             hhhhhhhhheeeCCCCCCCcceeeccCcCCchhhhhccccCChhhhheeecCCcccCCCCchHHHHHHHHHHHHHHHhCC
Confidence            999999999999      466665               25899999999999999999999999999999999999999


Q ss_pred             CCCCCCCC
Q 032636          129 APGPNLYC  136 (136)
Q Consensus       129 ~~g~~l~~  136 (136)
                      ++|+||+|
T Consensus       223 ~~g~nL~C  230 (230)
T cd00325         223 SPGDNLDC  230 (230)
T ss_pred             CCCCCCCC
Confidence            99999999

Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different en

>PF00182 Glyco_hydro_19: Chitinase class I; InterPro: IPR000726 O-Glycosyl hydrolases 3

Probab=100.00  E-value=5.2e-45  Score=286.61  Aligned_cols=131  Identities=56%  Similarity=1.079  Sum_probs=100.0

Q ss_pred             eeeEeecCCCCcccCCCCCCcCCCCCcccccccccccChhHHHHHHHHhCCCCCCCccccccCchhhhHHHHHHHHh---
Q 032636            5 CYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMT---   81 (136)
Q Consensus         5 ~y~~E~~~~~~y~~~~~~~~~~~dG~~Y~GRG~iQLTg~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sa~wfW~~---   81 (136)
                      |+.+|......||+.. +++||+||++|+|||+|||||++||++|++++++|||+|||||++||.+|+.+|+||||+   
T Consensus        81 c~~~e~~~~~~y~~~~-~~~p~~~g~~Y~GRG~iQLT~~~NY~~~g~~lg~dl~~nP~lv~~d~~~a~~sA~wfW~~~~~  159 (232)
T PF00182_consen   81 CYKREKGANSDYCNRN-GNYPCGDGKKYYGRGPIQLTWNYNYGAFGEALGLDLLNNPDLVATDPWLAFKSAIWFWMTPQP  159 (232)
T ss_dssp             S-SB-SS-SSGG--TT-SSS--TTTTGGS-BTTTTB-SHHHHHHHHHHHTS-TTT-TTHHHH-HHHHHHHHHHHHHHSBT
T ss_pred             ccccccCCccccccCc-cCccCCCCCeEecccccccchhhhHHHHHHHhCCccccChHHHHhhHHHHHHhhhhheeecCC
Confidence            3333333334556543 688999999999999999999999999999999999999999999999999999999999   


Q ss_pred             ---hhhhhhc---------------cchhhhhhhhcCccccCCCChhhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 032636           82 ---YVHPVMN---------------QGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC  136 (136)
Q Consensus        82 ---~~~~~~~---------------~~f~~~t~~INGgl~c~~~~~~~~~~R~~~y~~~~~~lgv~~g~~l~~  136 (136)
                         ++|++|.               ++|+.|++||||++||.++.+..+++|+.+|++++++|||++|+||+|
T Consensus       160 ~~ps~h~vi~~~w~p~~~~~~~~r~~gfG~t~~iINgg~Ec~~~~~~~~~~Ri~~y~~~~~~~~v~~g~nl~C  232 (232)
T PF00182_consen  160 PKPSCHDVITGQWTPSAADLAAGRVPGFGATTNIINGGLECGGGNTDQVQNRIGYYKRYCDMLGVDPGDNLDC  232 (232)
T ss_dssp             TBSSHHHHHTTSS-HHHHHHHTTTTSSHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHT----S----
T ss_pred             CccCcchhcccccCCchhhhhhccCCCcchhhhhccCccccCCCCchHHhHHHHHHHHHHHHhCCCCCCCCCC
Confidence               3788772               489999999999999999999999999999999999999999999999

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 19 GH19 from CAZY comprises enzymes with only one known activity; chitinase (3.2.1.14 from EC). Chitinases [] are enzymes that catalyse the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Chitinases belong to glycoside hydrolase families 18 or 19 []. Chitinases of family 19 (also known as classes IA or I and IB or II) are enzymes from plants that function in the defence against fungal and insect pathogens by destroying their chitin-containing cell wall. Class IA/I and IB/II enzymes differ in the presence (IA/I) or absence (IB/II) of a N-terminal chitin-binding domain. The catalytic domain of these enzymes consist of about 220 to 230 amino acid residues.; GO: 0004568 chitinase activity, 0006032 chitin catabolic process, 0016998 cell wall macromolecule catabolic process; PDB: 3IWR_A 2DKV_A 3CQL_A 2Z38_A 2Z37_D 2Z39_B 1DXJ_A 1WVU_B 1WVV_B 2DBT_C ....

>KOG4742 consensus Predicted chitinase [General function prediction only]

Probab=100.00  E-value=7.3e-43  Score=278.62  Aligned_cols=134  Identities=60%  Similarity=1.115  Sum_probs=122.9

Q ss_pred             CceeeEeecC-CCCcccCCCCC-CcCCCCCcccccccccccChhHHHHHHHHhCCCCCCCccccccCchhhhHHHHHHHH
Q 032636            3 NLCYVEEINK-YNRYCDEQNQQ-YPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWM   80 (136)
Q Consensus         3 ~~~y~~E~~~-~~~y~~~~~~~-~~~~dG~~Y~GRG~iQLTg~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sa~wfW~   80 (136)
                      +|||.+|+.. ...||+.+++. |||.+|+.|+|||+|||+|+|||+++++.+++|||++||+|+.||.+||++|+||||
T Consensus       143 ~fc~~~e~s~~~~~YC~~s~~~~yPCs~gk~Y~GRG~iQlsWNyNYG~ag~alg~dLL~~Pe~V~~np~lAf~~alWfwm  222 (286)
T KOG4742|consen  143 GFCYKEEISPSSGRYCDASNQITYPCSPGKSYYGRGPIQLSWNYNYGAAGKALGLDLLRNPELVAMNPVLAFKAALWFWM  222 (286)
T ss_pred             CcccccccChhhhccCCcccceEeecCCCCcccccCcccccccccccHhHhhcCchhhcCcchhccCchhhhheeeeeec
Confidence            8999999998 56899999877 999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhh----hhhh---ccchhhhhhhhcCccccCCCCh-hhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 032636           81 TYV----HPVM---NQGFGATIQRINGAIECGGKQP-AQVQARNGYYKDYCNKFGVAPGPNLYC  136 (136)
Q Consensus        81 ~~~----~~~~---~~~f~~~t~~INGgl~c~~~~~-~~~~~R~~~y~~~~~~lgv~~g~~l~~  136 (136)
                      +..    ++.+   .++|+.|+++|||++||..+.. ...++|+.+|+.++++|||.+|+||+|
T Consensus       223 t~~~p~~~~~a~~~~~gFGaTt~~Ing~~EC~~~~~~~~~~~Ri~~y~~~c~~fGv~pG~nLsC  286 (286)
T KOG4742|consen  223 TPVRPVLNDFAAYDTPGFGATTRAINGDLECGGGNLDGVKARRIKYYLAYCGLFGVNPGPNLSC  286 (286)
T ss_pred             cCCchhhhhhhcccCCCcchhhhhhccceeccCCCCCcchhHHHHHHHHHHHhhCCCCCCCCCC
Confidence            954    3333   3599999999999999998864 445669999999999999999999999

>COG3179 Predicted chitinase [General function prediction only]

Probab=99.94  E-value=9e-27  Score=176.59  Aligned_cols=101  Identities=26%  Similarity=0.467  Sum_probs=91.2

Q ss_pred             cCCCCCCcCCCCCcccccccccccChhHHHHHHHHhCCCCCCCccccccCchhhhHHHHHHHHh-hhhhhhc-cchhhhh
Q 032636           18 DEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMT-YVHPVMN-QGFGATI   95 (136)
Q Consensus        18 ~~~~~~~~~~dG~~Y~GRG~iQLTg~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sa~wfW~~-~~~~~~~-~~f~~~t   95 (136)
                      ..+|++...+|||+|||||.|||||+.||..+++++++||+.||+++..+ .++.++|+|||.+ .|+..+| +|+..||
T Consensus       102 RlGN~~e~sgDGw~yRgrg~iQiTGrdNY~~~g~alg~dlv~~P~~~~~~-~~~a~~a~wyw~~~g~n~~aD~gd~~~VT  180 (206)
T COG3179         102 RLGNGPEKSGDGWLYRGRGLIQITGRDNYRRCGRALGLDLVANPGQLELD-PHAARVAAWYWKTRGLNALADEGDLVRVT  180 (206)
T ss_pred             cccCCCCCCCCceeeccCcceeeecchHHHHHHHhhCCCccCChhhhccC-hHhhhhHHHHHHhccHHHhhccCChhhhh
Confidence            44677777899999999999999999999999999999999999999984 5788999999999 6887775 6899999


Q ss_pred             hhhcCccccCCCChhhHHHHHHHHHHHHHHc
Q 032636           96 QRINGAIECGGKQPAQVQARNGYYKDYCNKF  126 (136)
Q Consensus        96 ~~INGgl~c~~~~~~~~~~R~~~y~~~~~~l  126 (136)
                      ++||||       .||+++|.+.|+++..++
T Consensus       181 ~~INGG-------~NG~~dR~~r~~~a~~v~  204 (206)
T COG3179         181 RKINGG-------LNGLDDRLARYRRASGVL  204 (206)
T ss_pred             hhhcCc-------cccHHHHHHHHHHHhccc
Confidence            999999       699999999999987654

>cd00442 lysozyme_like lysozyme_like domain

Probab=99.25  E-value=1.9e-12  Score=89.99  Aligned_cols=60  Identities=27%  Similarity=0.153  Sum_probs=55.6

Q ss_pred             cCCCCCcccccccccccChhHHHHHHHHhCCCCCCCccccccCchhhhHHHHHHHHhhhh
Q 032636           25 PCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMTYVH   84 (136)
Q Consensus        25 ~~~dG~~Y~GRG~iQLTg~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sa~wfW~~~~~   84 (136)
                      ||..|..|.|||+||+||++||...++.++++++.+|++++.+|.+++..+.||||...+
T Consensus        24 ~~~~~~~~~~~G~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~n   83 (105)
T cd00442          24 TLNPGERGYGIGLYQLTSRWSDAYRARGIGLKLLAQLILKLFNPKVQDKQALQQIKNAGA   83 (105)
T ss_pred             CCCCCCcccccCceeeeeccCccccccccCcchhcCcchhccCchHHHHHHHHHHHhccC
Confidence            676788999999999999999999999999999999999999999999999999998433

This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	136
3hbd_A	204	Class Iv Chitinase Structure From Picea Abies At 1.		3e-33
2z37_A	244	Crystal Structure Of Brassica Juncea Chitinase Cata		7e-33
2z38_A	247	Crystal Structure Of Chloride Bound Brassica Juncea		7e-33
2z39_A	246	Crystal Structure Of Brassica Juncea Chitinase Cata		3e-32
3w3e_A	242	Structure Of Vigna Unguiculata Chitinase With Regul		3e-31
4dwx_A	244	Crystal Structure Of A Family Gh-19 Chitinase From		2e-30
1cns_A	243	Crystal Structure Of Chitinase At 1.91a Resolution		6e-29
1dxj_A	242	Structure Of The Chitinase From Jack Bean Length =		4e-28
2baa_A	243	The Refined Crystal Structure Of An Endochitinase F		5e-28
1wvu_A	265	Crystal Structure Of Chitinase C From Streptomyces		3e-27
1wvv_A	265	Crystal Structure Of Chitinase C Mutant E147q Lengt		3e-27
2dkv_A	309	Crystal Structure Of Class I Chitinase From Oryza S		1e-26
2cjl_A	204	Crystal Structure And Enzymatic Properties Of A Bac		1e-25
3cql_A	243	Crystal Structure Of Gh Family 19 Chitinase From Ca		2e-25

>pdb|3HBD|A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a Length = 204

Iteration: 1
 Score =  136 bits (343), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/137 (49%), Positives = 90/137 (65%), Gaps = 6/137 (4%)
Query: 4   LCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPET 63
           LCY+ E N    YC + +  +PC  GK Y+GRGP+QL+ N +YGAAGK+IGFDGL  PE 
Sbjct: 70  LCYINEKNPPINYC-QSSSTWPCTSGKSYHGRGPLQLSWNYNYGAAGKSIGFDGLNNPEK 128
Query: 64  VARDPVVSFKTALWFWM--TYVHPVMN--QGFGATIQRINGAIECGGKQPAQVQARNGYY 119
           V +D  +SFKTA+WFWM  +  H  +   QGFG TI+ IN ++EC G    +V +R  YY
Sbjct: 129 VGQDSTISFKTAVWFWMKNSNCHSAITSGQGFGGTIKAIN-SMECNGGNSGEVSSRVNYY 187
Query: 120 KDYCNKFGVAPGPNLYC 136
           K  C++ GV PG N+ C
Sbjct: 188 KKICSQLGVDPGANVSC 204

>pdb|2Z37|A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) Length = 244

Iteration: 1
 Score =  135 bits (340), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 65/153 (42%), Positives = 89/153 (58%), Gaps = 21/153 (13%)
Query: 5   CYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETV 64
           CY EEI+K + +CD  N ++PC PGKFYYGRGP+ L+ N +YG  G+ +G + L+ P+  
Sbjct: 85  CYKEEIDKSDPHCDSNNLEWPCAPGKFYYGRGPMMLSWNYNYGPCGRDLGLELLKNPDVA 144
Query: 65  ARDPVVSFKTALWFWMT------YVHPVMNQ---------------GFGATIQRINGAIE 103
           + DPV++FKTA+WFWMT        H V+                 G+G     ING +E
Sbjct: 145 SSDPVIAFKTAIWFWMTPQAPKPSCHDVITDQWEPSAADISAGRLPGYGVITNIINGGLE 204
Query: 104 CGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
           C G+  A+VQ R  +Y  YC  FGV PG N+ C
Sbjct: 205 CAGRDVAKVQDRISFYTRYCGMFGVDPGSNIDC 237

>pdb|2Z38|A Chain A, Crystal Structure Of Chloride Bound Brassica Juncea Chitinase Catalytic Module (Bjchi3) Length = 247

Iteration: 1
 Score =  135 bits (340), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 65/153 (42%), Positives = 89/153 (58%), Gaps = 21/153 (13%)
Query: 5   CYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETV 64
           CY EEI+K + +CD  N ++PC PGKFYYGRGP+ L+ N +YG  G+ +G + L+ P+  
Sbjct: 88  CYKEEIDKSDPHCDSNNLEWPCAPGKFYYGRGPMMLSWNYNYGPCGRDLGLELLKNPDVA 147
Query: 65  ARDPVVSFKTALWFWMT------YVHPVMNQ---------------GFGATIQRINGAIE 103
           + DPV++FKTA+WFWMT        H V+                 G+G     ING +E
Sbjct: 148 SSDPVIAFKTAIWFWMTPQAPKPSCHDVITDQWEPSAADISAGRLPGYGVITNIINGGLE 207
Query: 104 CGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
           C G+  A+VQ R  +Y  YC  FGV PG N+ C
Sbjct: 208 CAGRDVAKVQDRISFYTRYCGMFGVDPGSNIDC 240

>pdb|2Z39|A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module Glu234ala Mutant (bjchi3-e234a) Length = 246

Iteration: 1
 Score =  133 bits (334), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 88/153 (57%), Gaps = 21/153 (13%)
Query: 5   CYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETV 64
           CY E I+K + +CD  N ++PC PGKFYYGRGP+ L+ N +YG  G+ +G + L+ P+  
Sbjct: 87  CYKEAIDKSDPHCDSNNLEWPCAPGKFYYGRGPMMLSWNYNYGPCGRDLGLELLKNPDVA 146
Query: 65  ARDPVVSFKTALWFWMT------YVHPVMNQ---------------GFGATIQRINGAIE 103
           + DPV++FKTA+WFWMT        H V+                 G+G     ING +E
Sbjct: 147 SSDPVIAFKTAIWFWMTPQAPKPSCHDVITDQWEPSAADISAGRLPGYGVITNIINGGLE 206
Query: 104 CGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
           C G+  A+VQ R  +Y  YC  FGV PG N+ C
Sbjct: 207 CAGRDVAKVQDRISFYTRYCGMFGVDPGSNIDC 239

>pdb|3W3E|A Chain A, Structure Of Vigna Unguiculata Chitinase With Regulation Activity Of The Plant Cell Wall Length = 242

Iteration: 1
 Score =  130 bits (326), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/154 (50%), Positives = 89/154 (57%), Gaps = 26/154 (16%)
Query: 5   CYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETV 64
           C+V E +K NRYCD      PC  GK YYGRGPIQLT N +Y AAG+A+G D +  P+ V
Sbjct: 86  CFVTERDKSNRYCDGSG---PCSAGKSYYGRGPIQLTHNYNYNAAGRALGVDLINNPDLV 142
Query: 65  ARDPVVSFKTALWFWMT------YVHPVMNQ---------------GFGATIQRINGAIE 103
           ARD VVSFKTALWFWMT        H V+                 GFG     ING +E
Sbjct: 143 ARDAVVSFKTALWFWMTPQGNKPSCHDVITNRWTPSAADKAANRVPGFGVITNIINGGLE 202
Query: 104 CG-GKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
           CG G  PA    R G+YK YC+ FGV+ GPNL C
Sbjct: 203 CGKGPTPASGD-RIGFYKRYCDVFGVSYGPNLNC 235

>pdb|4DWX|A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds Length = 244

Iteration: 1
 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/153 (47%), Positives = 86/153 (56%), Gaps = 22/153 (14%)
Query: 5   CYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETV 64
           C+ +E      YC   + Q+PC PGK YYGRGPIQL+ N +YG AG+AIG D LR P+ V
Sbjct: 86  CFKQERGAAADYC-TPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLV 144
Query: 65  ARDPVVSFKTALWFWMT------YVHPVMN---------------QGFGATIQRINGAIE 103
           A DP VSFKTALWFWMT        H V+                 GFG     ING +E
Sbjct: 145 ATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLE 204
Query: 104 CGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
           CG  Q ++V  R G+YK YC+  GV  G NL C
Sbjct: 205 CGHGQDSRVADRIGFYKRYCDILGVGYGDNLDC 237

>pdb|1CNS|A Chain A, Crystal Structure Of Chitinase At 1.91a Resolution Length = 243

Iteration: 1
 Score =  122 bits (306), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 86/153 (56%), Gaps = 22/153 (14%)
Query: 5   CYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETV 64
           C+ +E    + YC   + Q+PC PGK YYGRGPIQL+ N +YG AG+AIG D L  P+ V
Sbjct: 85  CFKQERGASSDYC-TPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLV 143
Query: 65  ARDPVVSFKTALWFWMTYVHP-------VMNQ--------------GFGATIQRINGAIE 103
           A D  VSFKTA+WFWMT   P       ++ Q              GFG     ING IE
Sbjct: 144 ATDATVSFKTAMWFWMTAQPPKPSSHAVIVGQWSPSGADRAAGRVPGFGVITNIINGGIE 203
Query: 104 CGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
           CG  Q ++V  R G+YK YC+  GV  G NL C
Sbjct: 204 CGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 236

>pdb|1DXJ|A Chain A, Structure Of The Chitinase From Jack Bean Length = 242

Iteration: 1
 Score =  119 bits (299), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/154 (46%), Positives = 86/154 (55%), Gaps = 26/154 (16%)
Query: 5   CYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETV 64
           C+V E +K N+YCD      PC  GK YYGRGPIQLT N +Y  AG+A+G D +  P+ V
Sbjct: 85  CFVTERDKSNKYCDPGT---PCPAGKSYYGRGPIQLTHNYNYAQAGRALGVDLINNPDLV 141
Query: 65  ARDPVVSFKTALWFWMT------YVHPVMNQ---------------GFGATIQRINGAIE 103
           ARD V+SFKTA+WFWMT        H V+                 GFG     ING IE
Sbjct: 142 ARDAVISFKTAIWFWMTPQGNKPSCHDVITNRWTPSAADVAANRTPGFGVITNIINGGIE 201
Query: 104 CG-GKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
           CG G  PA    R G+YK YC+   ++ GPNL C
Sbjct: 202 CGRGPSPASGD-RIGFYKRYCDVLHLSYGPNLNC 234

>pdb|2BAA|A Chain A, The Refined Crystal Structure Of An Endochitinase From Hordeum Vulgare L. Seeds To 1.8 Angstroms Resolution Length = 243

Iteration: 1
 Score =  119 bits (299), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/153 (44%), Positives = 83/153 (54%), Gaps = 22/153 (14%)
Query: 5   CYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETV 64
           C+ +E    + YC   + Q+PC PGK YYGRGPIQL+ N +YG AG+AIG D L  P+ V
Sbjct: 85  CFKQERGASSDYC-TPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLV 143
Query: 65  ARDPVVSFKTALWFWMTYVHPVMNQ---------------------GFGATIQRINGAIE 103
           A D  V FKTA+WFWMT   P  +                      GFG     ING IE
Sbjct: 144 ATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIE 203
Query: 104 CGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
           CG  Q ++V  R G+YK YC+  GV  G NL C
Sbjct: 204 CGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 236

>pdb|1WVU|A Chain A, Crystal Structure Of Chitinase C From Streptomyces Griseus Hut6037 Length = 265

Iteration: 1
 Score =  117 bits (292), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/145 (45%), Positives = 85/145 (58%), Gaps = 13/145 (8%)
Query: 4   LCYVEEINKYN--RYCDEQNQQYPCVPGKF-YYGRGPIQLTGNGDYGAAGKAIGFDGLRA 60
           L Y++E+N+ N   YCD   Q Y C  G+  YYGRGPIQL+ N +Y AAG A+G + L  
Sbjct: 122 LFYIKEVNEANYPHYCDTT-QSYGCPAGQAAYYGRGPIQLSWNFNYKAAGDALGINLLAN 180
Query: 61  PETVARDPVVSFKTALWFWMTYVHP---------VMNQGFGATIQRINGAIECGGKQPAQ 111
           P  V +DP V++KT LW+W +   P         V N GFG TI+ INGA+EC G  PAQ
Sbjct: 181 PYLVEQDPAVAWKTGLWYWNSQNGPGTMTPHNAIVNNAGFGETIRSINGALECNGGNPAQ 240
Query: 112 VQARNGYYKDYCNKFGVAPGPNLYC 136
           VQ+R   +  +    G   GPNL C
Sbjct: 241 VQSRINKFTQFTQILGTTTGPNLSC 265

>pdb|1WVV|A Chain A, Crystal Structure Of Chitinase C Mutant E147q Length = 265

Iteration: 1
 Score =  117 bits (292), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/145 (45%), Positives = 85/145 (58%), Gaps = 13/145 (8%)
Query: 4   LCYVEEINKYN--RYCDEQNQQYPCVPGKF-YYGRGPIQLTGNGDYGAAGKAIGFDGLRA 60
           L Y++E+N+ N   YCD   Q Y C  G+  YYGRGPIQL+ N +Y AAG A+G + L  
Sbjct: 122 LFYIKEVNEANYPHYCDT-TQSYGCPAGQAAYYGRGPIQLSWNFNYKAAGDALGINLLAN 180
Query: 61  PETVARDPVVSFKTALWFWMTYVHP---------VMNQGFGATIQRINGAIECGGKQPAQ 111
           P  V +DP V++KT LW+W +   P         V N GFG TI+ INGA+EC G  PAQ
Sbjct: 181 PYLVEQDPAVAWKTGLWYWNSQNGPGTMTPHNAIVNNAGFGETIRSINGALECNGGNPAQ 240
Query: 112 VQARNGYYKDYCNKFGVAPGPNLYC 136
           VQ+R   +  +    G   GPNL C
Sbjct: 241 VQSRINKFTQFTQILGTTTGPNLSC 265

>pdb|2DKV|A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica Length = 309

Iteration: 1
 Score =  115 bits (287), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/153 (42%), Positives = 85/153 (55%), Gaps = 22/153 (14%)
Query: 5   CYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETV 64
           C+ +E N  + YC + + ++PC PG+ YYGRGPIQL+ N +YG AG+AIG D L  P+ V
Sbjct: 141 CFKQEQNPPSDYC-QPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLV 199
Query: 65  ARDPVVSFKTALWFWMT------YVHPVMN---------------QGFGATIQRINGAIE 103
           A D  VSFKTALWFWMT        H V+                 G+G     +NG +E
Sbjct: 200 ATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLE 259
Query: 104 CGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
           CG     +V  R G+Y+ YC  FG+  G NL C
Sbjct: 260 CGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDC 292

>pdb|2CJL|A Chain A, Crystal Structure And Enzymatic Properties Of A Bacterial Family 19 Chitinase Reveal Differences With Plant Enzymes Length = 204

Iteration: 1
 Score =  111 bits (277), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/145 (45%), Positives = 81/145 (55%), Gaps = 13/145 (8%)
Query: 4   LCYVEEINKYN--RYCDEQNQQYPCVPGKF-YYGRGPIQLTGNGDYGAAGKAIGFDGLRA 60
           L YV E N  N   YCD  +Q Y C  G   YYGRGP+QL+ N +Y AAG A+G D L  
Sbjct: 61  LVYVVEQNTANYPHYCDA-SQPYGCPAGNDKYYGRGPVQLSWNFNYKAAGDALGIDLLNN 119
Query: 61  PETVARDPVVSFKTALWFWMTYVHP---------VMNQGFGATIQRINGAIECGGKQPAQ 111
           P+ V  D  V++KT LW+W T   P         V   GFG TI+ ING++EC G  P Q
Sbjct: 120 PDLVQNDSAVAWKTGLWYWNTQTGPGTMTPHDAMVNGAGFGETIRSINGSLECDGGNPGQ 179
Query: 112 VQARNGYYKDYCNKFGVAPGPNLYC 136
           VQ+R   Y+ +    GV PG NL C
Sbjct: 180 VQSRIDNYERFTQLLGVEPGGNLSC 204

>pdb|3CQL|A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya Length = 243

Iteration: 1
 Score =  110 bits (275), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 83/153 (54%), Gaps = 22/153 (14%)
Query: 5   CYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETV 64
           C+++E N  + YC   + +YPC PGK YYGRGPIQL+ N +YG  G+A+  + L  P+ V
Sbjct: 85  CFLKERNPSSNYC-APSPRYPCAPGKSYYGRGPIQLSWNYNYGPCGEALRVNLLGNPDLV 143
Query: 65  ARDPVVSFKTALWFWMT------YVHPVMN---------------QGFGATIQRINGAIE 103
           A D V+SFKTALWFWMT        H V+                 G+G     ING +E
Sbjct: 144 ATDRVISFKTALWFWMTPQAPKPSCHDVITGRWQPSAADTAAGRLPGYGVITNIINGGLE 203
Query: 104 CGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
           CG     QV  R G+++ YC   GV  G NL C
Sbjct: 204 CGKGPNPQVADRIGFFRRYCGILGVGTGNNLDC 236

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	136
2z37_A	244	Chitinase; family 19, conformational changes, hydr	5e-45
2cjl_A	204	Chitinase G, secreted chitinase; hydrolase, plant	5e-42
1wvv_A	265	Chitinase C; family 19 chitinase, whole structure,	7e-41
3cql_A	243	Endochitinase; glycosyl hydrolase, N-acetyl-D-gluc	9e-41
1dxj_A	242	Class II chitinase; hydrolase, family 19 glycosida	2e-40
2dkv_A	309	Chitinase; whole structure, oryza sativa L. japoni	2e-37
3hbe_X	204	Class IV chitinase CHIA4-PA2; endochitinase, famil	2e-36

>2z37_A Chitinase; family 19, conformational changes, hydrolase; 1.53A {Brassica juncea} PDB: 2z38_A 2z39_A Length = 244

 Score =  146 bits (368), Expect = 5e-45
 Identities = 64/154 (41%), Positives = 88/154 (57%), Gaps = 21/154 (13%)

Query: 4   LCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPET 63
            CY EEI+K + +CD  N ++PC PGKFYYGRGP+ L+ N +YG  G+ +G + L+ P+ 
Sbjct: 84  YCYKEEIDKSDPHCDSNNLEWPCAPGKFYYGRGPMMLSWNYNYGPCGRDLGLELLKNPDV 143

Query: 64  VARDPVVSFKTALWFWMTYVHPVMN---------------------QGFGATIQRINGAI 102
            + DPV++FKTA+WFWMT   P  +                      G+G     ING +
Sbjct: 144 ASSDPVIAFKTAIWFWMTPQAPKPSCHDVITDQWEPSAADISAGRLPGYGVITNIINGGL 203

Query: 103 ECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
           EC G+  A+VQ R  +Y  YC  FGV PG N+ C
Sbjct: 204 ECAGRDVAKVQDRISFYTRYCGMFGVDPGSNIDC 237

>2cjl_A Chitinase G, secreted chitinase; hydrolase, plant enzymes; 1.5A {Streptomyces coelicolor} Length = 204

 Score =  137 bits (345), Expect = 5e-42
 Identities = 61/146 (41%), Positives = 75/146 (51%), Gaps = 11/146 (7%)

Query: 2   RNLCYVEEINKYN--RYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLR 59
             L YV E N  N   YCD             YYGRGP+QL+ N +Y AAG A+G D L 
Sbjct: 59  GGLVYVVEQNTANYPHYCDASQPYGCPAGNDKYYGRGPVQLSWNFNYKAAGDALGIDLLN 118

Query: 60  APETVARDPVVSFKTALWFWMTYVHPVM---------NQGFGATIQRINGAIECGGKQPA 110
            P+ V  D  V++KT LW+W T   P             GFG TI+ ING++EC G  P 
Sbjct: 119 NPDLVQNDSAVAWKTGLWYWNTQTGPGTMTPHDAMVNGAGFGETIRSINGSLECDGGNPG 178

Query: 111 QVQARNGYYKDYCNKFGVAPGPNLYC 136
           QVQ+R   Y+ +    GV PG NL C
Sbjct: 179 QVQSRIDNYERFTQLLGVEPGGNLSC 204

>1wvv_A Chitinase C; family 19 chitinase, whole structure, hydrolase; 2.00A {Streptomyces griseus} PDB: 1wvu_A 2dbt_A* 2d49_A Length = 265

 Score =  135 bits (341), Expect = 7e-41
 Identities = 62/146 (42%), Positives = 80/146 (54%), Gaps = 11/146 (7%)

Query: 2   RNLCYVEEINK--YNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLR 59
             L Y++E+N+  Y  YCD             YYGRGPIQL+ N +Y AAG A+G + L 
Sbjct: 120 GGLFYIKEVNEANYPHYCDTTQSYGCPAGQAAYYGRGPIQLSWNFNYKAAGDALGINLLA 179

Query: 60  APETVARDPVVSFKTALWFWMTYVHP---------VMNQGFGATIQRINGAIECGGKQPA 110
            P  V +DP V++KT LW+W +   P         V N GFG TI+ INGA+EC G  PA
Sbjct: 180 NPYLVEQDPAVAWKTGLWYWNSQNGPGTMTPHNAIVNNAGFGETIRSINGALECNGGNPA 239

Query: 111 QVQARNGYYKDYCNKFGVAPGPNLYC 136
           QVQ+R   +  +    G   GPNL C
Sbjct: 240 QVQSRINKFTQFTQILGTTTGPNLSC 265

>3cql_A Endochitinase; glycosyl hydrolase, N-acetyl-D-glucosamine, carbo metabolism, chitin degradation, chitin-binding, glycosidase hydrolase; HET: NDG NAG; 1.50A {Carica papaya} PDB: 1cns_A 2baa_A Length = 243

 Score =  135 bits (339), Expect = 9e-41
 Identities = 63/155 (40%), Positives = 82/155 (52%), Gaps = 22/155 (14%)

Query: 3   NLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPE 62
             C+++E N  + YC   + +YPC PGK YYGRGPIQL+ N +YG  G+A+  + L  P+
Sbjct: 83  GYCFLKERNPSSNYCA-PSPRYPCAPGKSYYGRGPIQLSWNYNYGPCGEALRVNLLGNPD 141

Query: 63  TVARDPVVSFKTALWFWMTYVHPVMN---------------------QGFGATIQRINGA 101
            VA D V+SFKTALWFWMT   P  +                      G+G     ING 
Sbjct: 142 LVATDRVISFKTALWFWMTPQAPKPSCHDVITGRWQPSAADTAAGRLPGYGVITNIINGG 201

Query: 102 IECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
           +ECG     QV  R G+++ YC   GV  G NL C
Sbjct: 202 LECGKGPNPQVADRIGFFRRYCGILGVGTGNNLDC 236

>1dxj_A Class II chitinase; hydrolase, family 19 glycosidase, alpha helical protein; 1.8A {Canavalia ensiformis} SCOP: d.2.1.1 Length = 242

 Score =  134 bits (338), Expect = 2e-40
 Identities = 65/157 (41%), Positives = 81/157 (51%), Gaps = 24/157 (15%)

Query: 1   MRNLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRA 60
               C+V E +K N+YC   +   PC  GK YYGRGPIQLT N +Y  AG+A+G D +  
Sbjct: 81  AWGYCFVTERDKSNKYC---DPGTPCPAGKSYYGRGPIQLTHNYNYAQAGRALGVDLINN 137

Query: 61  PETVARDPVVSFKTALWFWMTYVHPVMN---------------------QGFGATIQRIN 99
           P+ VARD V+SFKTA+WFWMT      +                      GFG     IN
Sbjct: 138 PDLVARDAVISFKTAIWFWMTPQGNKPSCHDVITNRWTPSAADVAANRTPGFGVITNIIN 197

Query: 100 GAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
           G IECG         R G+YK YC+   ++ GPNL C
Sbjct: 198 GGIECGRGPSPASGDRIGFYKRYCDVLHLSYGPNLNC 234

>2dkv_A Chitinase; whole structure, oryza sativa L. japonica, hydrolase; HET: MES; 2.00A {Oryza sativa japonica group} PDB: 3iwr_A* Length = 309

 Score =  128 bits (322), Expect = 2e-37
 Identities = 63/155 (40%), Positives = 82/155 (52%), Gaps = 22/155 (14%)

Query: 3   NLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPE 62
             C+ +E N  + YC   + ++PC PG+ YYGRGPIQL+ N +YG AG+AIG D L  P+
Sbjct: 139 GYCFKQEQNPPSDYCQ-PSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPD 197

Query: 63  TVARDPVVSFKTALWFWMTYVHPVMN---------------------QGFGATIQRINGA 101
            VA D  VSFKTALWFWMT      +                      G+G     +NG 
Sbjct: 198 LVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGG 257

Query: 102 IECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
           +ECG     +V  R G+Y+ YC  FG+  G NL C
Sbjct: 258 LECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDC 292

>3hbe_X Class IV chitinase CHIA4-PA2; endochitinase, family 19, conformational changes, chitin-binding, glycosidase, hydrolase; 1.55A {Picea abies} PDB: 3hbd_A 3hbh_A Length = 204

 Score =  123 bits (308), Expect = 2e-36
 Identities = 67/138 (48%), Positives = 86/138 (62%), Gaps = 6/138 (4%)

Query: 3   NLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPE 62
            LCY+ E N    YC   +  +PC  GK Y+GRGP+QL+ N +YGAAGK+IGFDGL  PE
Sbjct: 69  GLCYINEKNPPINYCQ-SSSTWPCTSGKSYHGRGPLQLSWNYNYGAAGKSIGFDGLNNPE 127

Query: 63  TVARDPVVSFKTALWFWMTYVHP----VMNQGFGATIQRINGAIECGGKQPAQVQARNGY 118
            V +D  +SFKTA+WFWM   +        QGFG TI+ IN  +EC G    +V +R  Y
Sbjct: 128 KVGQDSTISFKTAVWFWMKNSNCHSAITSGQGFGGTIKAINS-MECNGGNSGEVSSRVNY 186

Query: 119 YKDYCNKFGVAPGPNLYC 136
           YK  C++ GV PG N+ C
Sbjct: 187 YKKICSQLGVDPGANVSC 204

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	136
3hbe_X	204	Class IV chitinase CHIA4-PA2; endochitinase, famil	100.0
3w3e_A	242	Cotyledoneous yieldin-like protein; alpha helical	100.0
2z37_A	244	Chitinase; family 19, conformational changes, hydr	100.0
3cql_A	243	Endochitinase; glycosyl hydrolase, N-acetyl-D-gluc	100.0
2cjl_A	204	Chitinase G, secreted chitinase; hydrolase, plant	100.0
1dxj_A	242	Class II chitinase; hydrolase, family 19 glycosida	100.0
2dkv_A	309	Chitinase; whole structure, oryza sativa L. japoni	100.0
1wvv_A	265	Chitinase C; family 19 chitinase, whole structure,	100.0

>3hbe_X Class IV chitinase CHIA4-PA2; endochitinase, family 19, conformational changes, chitin-binding, glycosidase, hydrolase; 1.55A {Picea abies} SCOP: d.2.1.0 PDB: 3hbd_A 3hbh_A

Probab=100.00  E-value=1.2e-52  Score=322.89  Aligned_cols=134  Identities=51%  Similarity=1.044  Sum_probs=129.3

Q ss_pred             CCCceeeEeecCCCCcccCCCCCCcCCCCCcccccccccccChhHHHHHHHHhCCCCCCCccccccCchhhhHHHHHHHH
Q 032636            1 MRNLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWM   80 (136)
Q Consensus         1 sg~~~y~~E~~~~~~y~~~~~~~~~~~dG~~Y~GRG~iQLTg~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sa~wfW~   80 (136)
                      ||+|||+||++++.+||++++ +|||+||++|||||+|||||++||+++++++++||++|||+|++||++|+++|+||||
T Consensus        67 Tgg~~~~~E~~~~~~Ycd~~~-~~pcgdG~~Y~GRG~IQLTg~~NY~~~g~~lg~Dll~nPdlva~dp~~a~~sA~wfW~  145 (204)
T 3hbe_X           67 TGGLCYINEKNPPINYCQSSS-TWPCTSGKSYHGRGPLQLSWNYNYGAAGKSIGFDGLNNPEKVGQDSTISFKTAVWFWM  145 (204)
T ss_dssp             HTTTTCSBCSSCSSCCCCCCS-SSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCGGGGGTCHHHHHHHHHHHHH
T ss_pred             CCCcEEEEeccCCCCccCCCC-CCCCCCCCcccCCCceecccHHHHHHHHHHhCCccccCHHHHhhCHHHHHHHHHhhhc
Confidence            689999999998889999886 8999999999999999999999999999999999999999999999999999999999


Q ss_pred             h--hhhhhhc--cchhhhhhhhcCccccCCCChhhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 032636           81 T--YVHPVMN--QGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC  136 (136)
Q Consensus        81 ~--~~~~~~~--~~f~~~t~~INGgl~c~~~~~~~~~~R~~~y~~~~~~lgv~~g~~l~~  136 (136)
                      +  ++|++++  ++|+.||++|| |+||.++++.++++|+++|++++++|||++|+||+|
T Consensus       146 t~~~~~~~~~~~~gfg~tt~~IN-G~eC~~~~~~~~~dRi~~Y~r~~~~Lgv~~g~nl~c  204 (204)
T 3hbe_X          146 KNSNCHSAITSGQGFGGTIKAIN-SMECNGGNSGEVSSRVNYYKKICSQLGVDPGANVSC  204 (204)
T ss_dssp             HSSSHHHHHTTTCHHHHHHHHHH-GGGTTTTCHHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             cCCCHHHHhccCCCHHHHHHHHh-ccccCCCCchhHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            6  7999884  79999999999 999999999999999999999999999999999999

>3w3e_A Cotyledoneous yieldin-like protein; alpha helical protein, hydrolase, family 19 glycosidase, REG protein of the cell WALL yield threshold; 1.50A {Vigna unguiculata} PDB: 1dxj_A

Probab=100.00  E-value=7.1e-51  Score=319.30  Aligned_cols=131  Identities=56%  Similarity=1.063  Sum_probs=125.7

Q ss_pred             CceeeEeecCCCCcccCCCCCCcCCCCCcccccccccccChhHHHHHHHHhCCCCCCCccccccCchhhhHHHHHHHHh-
Q 032636            3 NLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMT-   81 (136)
Q Consensus         3 ~~~y~~E~~~~~~y~~~~~~~~~~~dG~~Y~GRG~iQLTg~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sa~wfW~~-   81 (136)
                      ||||+||+++..+||+   .+|||+||++|||||+||||||+||++|++++++|||+|||+|++||.+|+++|+||||+ 
T Consensus        84 g~~~~~E~~~~~~YC~---~~~Pc~dG~~Y~GRG~IQLTg~~NY~~~g~~lg~Dll~nPdlva~dp~~a~~sA~wfW~t~  160 (242)
T 3w3e_A           84 GYCFVTERDKSNRYCD---GSGPCSAGKSYYGRGPIQLTHNYNYNAAGRALGVDLINNPDLVARDAVVSFKTALWFWMTP  160 (242)
T ss_dssp             TTCCSBCSCCSCCCCC---SSSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHHCC
T ss_pred             EEEEeecccCcccccc---cCCCCCCCCceecCCcccCCcHHHHHHHHHHhCCccccCHHHHhhCHHHHHHHHHhhheeC
Confidence            7999999998889998   689999999999999999999999999999999999999999999999999999999999 


Q ss_pred             -----hhhhhhc---------------cchhhhhhhhcCccccCCCChhhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 032636           82 -----YVHPVMN---------------QGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC  136 (136)
Q Consensus        82 -----~~~~~~~---------------~~f~~~t~~INGgl~c~~~~~~~~~~R~~~y~~~~~~lgv~~g~~l~~  136 (136)
                           ++|++|.               ++|+.||++||||+||.++..+++++|+++|++++++|||++|+||+|
T Consensus       161 ~~~kps~h~vi~g~w~p~~aD~~agr~~gfg~tt~iINGGlECg~~~~~~~~dRi~~Y~r~~~~Lgv~~G~nl~C  235 (242)
T 3w3e_A          161 QGNKPSCHDVITNRWTPSAADKAANRVPGFGVITNIINGGLECGKGPTPASGDRIGFYKRYCDVFGVSYGPNLNC  235 (242)
T ss_dssp             BTTBCCHHHHHTTCCCCCHHHHHTTCCSSHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             CCCCCchhhhhhccCCCccchhhhcccCChhhheeeecCccccCCCCchHHHHHHHHHHHHHHHhCCCCCCCcCc
Confidence                 5888762               689999999999999999999999999999999999999999999999

>2z37_A Chitinase; family 19, conformational changes, hydrolase; 1.53A {Brassica juncea} PDB: 2z38_A 2z39_A

Probab=100.00  E-value=2e-50  Score=318.00  Aligned_cols=134  Identities=49%  Similarity=1.080  Sum_probs=127.6

Q ss_pred             CceeeEeecCCCCcccCCCCCCcCCCCCcccccccccccChhHHHHHHHHhCCCCCCCccccccCchhhhHHHHHHHHh-
Q 032636            3 NLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMT-   81 (136)
Q Consensus         3 ~~~y~~E~~~~~~y~~~~~~~~~~~dG~~Y~GRG~iQLTg~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sa~wfW~~-   81 (136)
                      ||||++|+++...||+..+++|||+||++|||||+|||||++||+++++++++|||+|||+|++||.+|+++|+||||+ 
T Consensus        83 g~~~~~E~~~~~~Yc~~~~~~~pc~dG~~Y~GRG~IQLT~~~NY~~~g~~lg~dLl~nPdlva~dp~~a~~sA~WfW~t~  162 (244)
T 2z37_A           83 GYCYKEEIDKSDPHCDSNNLEWPCAPGKFYYGRGPMMLSWNYNYGPCGRDLGLELLKNPDVASSDPVIAFKTAIWFWMTP  162 (244)
T ss_dssp             TTCCSBCSCCCCCCCCTTCSSSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHHCC
T ss_pred             cceEeeeecCCcCCcCcCcCCcccCCCCeeecCCccccchHHHHHHHHHHhCCccccCHHHHhcChHHHHhhhheeeEEC
Confidence            6999999998889999887799999999999999999999999999999999999999999999999999999999998 


Q ss_pred             -----hhhhhhc---------------cchhhhhhhhcCccccCCCChhhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 032636           82 -----YVHPVMN---------------QGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC  136 (136)
Q Consensus        82 -----~~~~~~~---------------~~f~~~t~~INGgl~c~~~~~~~~~~R~~~y~~~~~~lgv~~g~~l~~  136 (136)
                           ++|++|.               ++|+.||++||||+||.+++.+++++|+++|++++++|||++|+||+|
T Consensus       163 ~~~kps~h~vi~g~w~ps~aD~~a~~~~gfg~~t~iINGG~eC~~~~~~~~~dRi~~y~~~~~~Lgv~~g~nl~c  237 (244)
T 2z37_A          163 QAPKPSCHDVITDQWEPSAADISAGRLPGYGVITNIINGGLECAGRDVAKVQDRISFYTRYCGMFGVDPGSNIDC  237 (244)
T ss_dssp             BTTBCCHHHHHTTCCCCCHHHHHTTCCSSHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             CCCCCchhhhhhccCCcchhhhhcccCCChhhhheeeeCCccCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCcCC
Confidence                 4777762               579999999999999999999999999999999999999999999999

>3cql_A Endochitinase; glycosyl hydrolase, N-acetyl-D-glucosamine, carbo metabolism, chitin degradation, chitin-binding, glycosidase hydrolase; HET: NDG NAG; 1.50A {Carica papaya} PDB: 1cns_A 2baa_A

Probab=100.00  E-value=3.5e-50  Score=316.39  Aligned_cols=132  Identities=48%  Similarity=0.992  Sum_probs=125.9

Q ss_pred             ceeeEeecCCCCcccCCCCCCcCCCCCcccccccccccChhHHHHHHHHhCCCCCCCccccccCchhhhHHHHHHHHh--
Q 032636            4 LCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMT--   81 (136)
Q Consensus         4 ~~y~~E~~~~~~y~~~~~~~~~~~dG~~Y~GRG~iQLTg~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sa~wfW~~--   81 (136)
                      |||+||++++..||+.. .+|||+||++|||||+|||||++||+++++++++|||+|||+|++||.+|+++|+||||+  
T Consensus        84 ~~~~~E~~~~~~Yc~~~-~~~pc~dG~~Y~GRG~IQLT~n~NY~~~g~~lg~dLl~nPdlva~dp~~a~~sA~WfW~t~~  162 (243)
T 3cql_A           84 YCFLKERNPSSNYCAPS-PRYPCAPGKSYYGRGPIQLSWNYNYGPCGEALRVNLLGNPDLVATDRVISFKTALWFWMTPQ  162 (243)
T ss_dssp             TCCSBCSSCSSCCCCCC-SSSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCGGGGGTCHHHHHHHHHHHHHCCB
T ss_pred             ceEEeeecCCCCccCCC-CCccCCCCCeeecCCccccchhHHHHHHHHHhCCccccCHHHHhcChHHHHHhHhhhhhcCC
Confidence            99999999888999887 589999999999999999999999999999999999999999999999999999999998  


Q ss_pred             ----hhhhhhc---------------cchhhhhhhhcCccccCCCChhhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 032636           82 ----YVHPVMN---------------QGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC  136 (136)
Q Consensus        82 ----~~~~~~~---------------~~f~~~t~~INGgl~c~~~~~~~~~~R~~~y~~~~~~lgv~~g~~l~~  136 (136)
                          ++|++|.               ++|+.||++||||+||.++..+++++|+++|++++++|||++|+||+|
T Consensus       163 ~~kps~h~vi~g~w~ps~aD~~a~~~~gfg~~t~iINGG~eC~~g~~~~~~dRi~~y~~~~~~Lgv~~g~nl~C  236 (243)
T 3cql_A          163 APKPSCHDVITGRWQPSAADTAAGRLPGYGVITNIINGGLECGKGPNPQVADRIGFFRRYCGILGVGTGNNLDC  236 (243)
T ss_dssp             TTBCCHHHHHHTCCCCCHHHHHHTCCSSHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             CCCCChhhhhhccCCcchhhhhcccCCChhhhheeeeCCccCCCCCchHHHHHHHHHHHHHHHhCCCCCCCcCC
Confidence                5777763               689999999999999999999999999999999999999999999999

>2cjl_A Chitinase G, secreted chitinase; hydrolase, plant enzymes; 1.5A {Streptomyces coelicolor}

Probab=100.00  E-value=2.3e-49  Score=305.13  Aligned_cols=135  Identities=49%  Similarity=0.907  Sum_probs=127.0

Q ss_pred             CCCceeeEeecCCC--CcccCCCCCCcCCCC-CcccccccccccChhHHHHHHHHhCCCCCCCccccccCchhhhHHHHH
Q 032636            1 MRNLCYVEEINKYN--RYCDEQNQQYPCVPG-KFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALW   77 (136)
Q Consensus         1 sg~~~y~~E~~~~~--~y~~~~~~~~~~~dG-~~Y~GRG~iQLTg~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sa~w   77 (136)
                      ||+|+|++|+.+..  .||+.+ .+|||+|| ++|||||+|||||++||+++++++++||++|||+|++||.+|+++|+|
T Consensus        58 Tgg~~~~~E~~~~~y~~~c~~~-~~y~~~~g~~~Y~GRG~iQLT~~~NY~~~g~~lg~dll~nPdlv~~dp~~a~~sA~w  136 (204)
T 2cjl_A           58 TGGLVYVVEQNTANYPHYCDAS-QPYGCPAGNDKYYGRGPVQLSWNFNYKAAGDALGIDLLNNPDLVQNDSAVAWKTGLW  136 (204)
T ss_dssp             HTTTTCSBCSCGGGGGGGCCTT-STTCCTTCTTCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHH
T ss_pred             cCCCcceeecCCCcCccccCCC-CCCCCCCCCccccCCChHHHhHHHHHHHHHHHhCcccccCHHHHhcCHHHHHHHHHH
Confidence            68999999998664  789876 57999998 699999999999999999999999999999999999999999999999


Q ss_pred             HHHh-------hhhhhh--ccchhhhhhhhcCccccCCCChhhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 032636           78 FWMT-------YVHPVM--NQGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC  136 (136)
Q Consensus        78 fW~~-------~~~~~~--~~~f~~~t~~INGgl~c~~~~~~~~~~R~~~y~~~~~~lgv~~g~~l~~  136 (136)
                      |||+       ++|+++  .++|+.||++||||+||.+++++++++|+++|++++++|||++|+||+|
T Consensus       137 fW~t~~~~~~~s~~~~~~~~~~f~~~t~~INGg~eC~~~~~~~~~~R~~~y~~~~~~lgv~~g~nl~c  204 (204)
T 2cjl_A          137 YWNTQTGPGTMTPHDAMVNGAGFGETIRSINGSLECDGGNPGQVQSRIDNYERFTQLLGVEPGGNLSC  204 (204)
T ss_dssp             HHHHCCTTSSSCHHHHHHTTCCHHHHHHHTTCTTTTTTTCHHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             HhhcCCCCCCCcHHHHHhcCCChhhhhhheeCCccCCCCCcccHHHHHHHHHHHHHHHCCCCCCCCCC
Confidence            9999       378887  5799999999999999999999999999999999999999999999999

>1dxj_A Class II chitinase; hydrolase, family 19 glycosidase, alpha helical protein; 1.8A {Canavalia ensiformis} SCOP: d.2.1.1

Probab=100.00  E-value=1.1e-48  Score=307.76  Aligned_cols=130  Identities=52%  Similarity=1.029  Sum_probs=123.5

Q ss_pred             ceeeEeecCCCCcccCCCCCCcCCCCCcccccccccccChhHHHHHHHHhCCCCCCCccccccCchhhhHHHHHHHHh--
Q 032636            4 LCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMT--   81 (136)
Q Consensus         4 ~~y~~E~~~~~~y~~~~~~~~~~~dG~~Y~GRG~iQLTg~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sa~wfW~~--   81 (136)
                      |||++|+++...||+...   ||+||++|||||+|||||++||+++++++++|||+|||+|++||.+|+++|+||||+  
T Consensus        84 ~~~~~E~~~~~~Yc~~~~---pc~dG~~Y~GRG~IQLT~~~NY~~~g~~lg~dLl~nPdlva~dp~~a~~sA~WfW~t~~  160 (242)
T 1dxj_A           84 YCFVTERDKSNKYCDPGT---PCPAGKSYYGRGPIQLTHNYNYAQAGRALGVDLINNPDLVARDAVISFKTAIWFWMTPQ  160 (242)
T ss_dssp             TCCSBCSCCCCCCCCTTS---CCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHHCCB
T ss_pred             ceeeeccCCCcccCcCCC---CCCCCCceecCCceecccHHHHHHHHHHhCCccccCHHHHhcChHHHHHhHHHHhhcCC
Confidence            999999998889998763   899999999999999999999999999999999999999999999999999999998  


Q ss_pred             ----hhhhhhc---------------cchhhhhhhhcCccccCCCChhhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 032636           82 ----YVHPVMN---------------QGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC  136 (136)
Q Consensus        82 ----~~~~~~~---------------~~f~~~t~~INGgl~c~~~~~~~~~~R~~~y~~~~~~lgv~~g~~l~~  136 (136)
                          ++|++|.               ++|+.||++||||+||.++..+++++|+++|++++++|||++|++|+|
T Consensus       161 ~~kps~hdvi~g~w~ps~aD~~a~~~~gfg~~t~iINGG~eC~~g~~~~~~dRi~~y~~~~~~Lgv~~g~nl~C  234 (242)
T 1dxj_A          161 GNKPSCHDVITNRWTPSAADVAANRTPGFGVITNIINGGIECGRGPSPASGDRIGFYKRYCDVLHLSYGPNLNC  234 (242)
T ss_dssp             TTBCCHHHHHTTCCCCCHHHHHTTCCSSHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             CCCCChhhhhhccCCcchhhhhcccCCChhhhheeeeCCcccCCCCchHHHHHHHHHHHHHHHhCCCcCCCcCC
Confidence                5777763               689999999999999999989999999999999999999999999999

>2dkv_A Chitinase; whole structure, oryza sativa L. japonica, hydrolase; HET: MES; 2.00A {Oryza sativa japonica group} PDB: 3iwr_A*

Probab=100.00  E-value=6.9e-48  Score=312.00  Aligned_cols=133  Identities=49%  Similarity=1.003  Sum_probs=126.0

Q ss_pred             CceeeEeecCCCCcccCCCCCCcCCCCCcccccccccccChhHHHHHHHHhCCCCCCCccccccCchhhhHHHHHHHHh-
Q 032636            3 NLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMT-   81 (136)
Q Consensus         3 ~~~y~~E~~~~~~y~~~~~~~~~~~dG~~Y~GRG~iQLTg~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sa~wfW~~-   81 (136)
                      ||||++|+++...||+.. .+|||+||++|||||+||||||+||++|++++++|||+|||||++||.+|+++|+||||+ 
T Consensus       139 G~~~~~E~~~~~~Yc~~~-~~~pcgdG~~Y~GRG~IQLT~~~NY~~~g~~lg~DLl~nPdlVa~dp~~A~~sA~WFW~t~  217 (309)
T 2dkv_A          139 GYCFKQEQNPPSDYCQPS-PEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTP  217 (309)
T ss_dssp             TTCCSBCSSCSCCCCCCC-SSSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHHCC
T ss_pred             cceeeeeecCCCCCcCCC-CCcccCCCCeeecCCcccccchhhHHHHHHHhCCccccCHHHHhcCHHHHHHhhhhheeeC
Confidence            399999999888999877 489999999999999999999999999999999999999999999999999999999998 


Q ss_pred             -----hhhhhhc---------------cchhhhhhhhcCccccCCCChhhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 032636           82 -----YVHPVMN---------------QGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC  136 (136)
Q Consensus        82 -----~~~~~~~---------------~~f~~~t~~INGgl~c~~~~~~~~~~R~~~y~~~~~~lgv~~g~~l~~  136 (136)
                           ++|++|.               ++|+.||+|||||+||.++..+++++|+++|++++++|||++|+||+|
T Consensus       218 ~~~kps~hdvi~g~w~ps~aD~~a~~~~gfg~~t~iINGG~EC~~g~~~~~~dRi~~y~r~~~~Lgv~~g~nl~C  292 (309)
T 2dkv_A          218 QGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDC  292 (309)
T ss_dssp             BTTBCCHHHHHTTCCCCCHHHHHTTCCSSHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHTTCCCCSCCCC
T ss_pred             CCCCCChhhhhhcccCcchhhhhcccCCChhheeeEEeCCcccCCCCchHHHHHHHHHHHHHHHhCCCCCCCcCC
Confidence                 5677763               689999999999999999989999999999999999999999999999

>1wvv_A Chitinase C; family 19 chitinase, whole structure, hydrolase; 2.00A {Streptomyces griseus} PDB: 1wvu_A 2dbt_A* 2d49_A

Probab=100.00  E-value=6.8e-48  Score=307.02  Aligned_cols=135  Identities=48%  Similarity=0.929  Sum_probs=127.1

Q ss_pred             CCCceeeEeecCCC--CcccCCCCCCcCCCC-CcccccccccccChhHHHHHHHHhCCCCCCCccccccCchhhhHHHHH
Q 032636            1 MRNLCYVEEINKYN--RYCDEQNQQYPCVPG-KFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALW   77 (136)
Q Consensus         1 sg~~~y~~E~~~~~--~y~~~~~~~~~~~dG-~~Y~GRG~iQLTg~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sa~w   77 (136)
                      ||+|+|++|+.++.  .||+.+ ..|||+|| ++|||||+|||||++||+++++++++||++|||||++||.+|+++|+|
T Consensus       119 Tgg~~~~~E~~~~~y~~~c~~~-~~~~c~~G~~~Y~GRG~IQLT~~~NY~~~g~~lg~dll~nPdlv~~dp~~a~~sA~w  197 (265)
T 1wvv_A          119 TGGLFYIKEVNEANYPHYCDTT-QSYGCPAGQAAYYGRGPIQLSWNFNYKAAGDALGINLLANPYLVEQDPAVAWKTGLW  197 (265)
T ss_dssp             HTTTTCSBCSCGGGGGGGCCTT-STTCCTTCTTCCSCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHH
T ss_pred             hccceeeEecCCCCCccccccC-CCCCCCCccccccCCCchhhhhHHHHHHHHHHhCcccccCHHHHhcchHHHHHHHHH
Confidence            68999999998664  689876 57999999 699999999999999999999999999999999999999999999999


Q ss_pred             HHHhh-------hhhhh--ccchhhhhhhhcCccccCCCChhhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 032636           78 FWMTY-------VHPVM--NQGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC  136 (136)
Q Consensus        78 fW~~~-------~~~~~--~~~f~~~t~~INGgl~c~~~~~~~~~~R~~~y~~~~~~lgv~~g~~l~~  136 (136)
                      |||+.       +|+++  .++|+.||++||||+||.+++++++++|+++|++++++|||++|+||+|
T Consensus       198 fW~t~~~~~~~s~~~~~~~~~gfg~~t~~INGg~eC~~~~~~~~~dR~~~y~~~~~~lgv~~g~nl~c  265 (265)
T 1wvv_A          198 YWNSQNGPGTMTPHNAIVNNAGFGETIRSINGALECNGGNPAQVQSRINKFTQFTQILGTTTGPNLSC  265 (265)
T ss_dssp             HHHHCCTTSSSCHHHHHHTTCCHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             HHhcCCCCCCCchhhhhhcCCChhheeeeeeCCcccCCCCcccHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            99993       78877  5799999999999999999999999999999999999999999999999

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	136
d2baaa_	243	d.2.1.1 (A:) Plant class II chitinase {Barley (Hor	2e-48
d1dxja_	242	d.2.1.1 (A:) Plant class II chitinase {Jack bean (	4e-47

>d2baaa_ d.2.1.1 (A:) Plant class II chitinase {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 243

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: Family 19 glycosidase
domain: Plant class II chitinase
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score =  153 bits (388), Expect = 2e-48
 Identities = 68/156 (43%), Positives = 83/156 (53%), Gaps = 22/156 (14%)

Query: 2   RNLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAP 61
              C+ +E    + YC   + Q+PC PGK YYGRGPIQL+ N +YG AG+AIG D L  P
Sbjct: 82  WGYCFKQERGASSDYCTP-SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANP 140

Query: 62  ETVARDPVVSFKTALWFWMTYVHPVMN---------------------QGFGATIQRING 100
           + VA D  V FKTA+WFWMT   P  +                      GFG     ING
Sbjct: 141 DLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIING 200

Query: 101 AIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
            IECG  Q ++V  R G+YK YC+  GV  G NL C
Sbjct: 201 GIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 236

>d1dxja_ d.2.1.1 (A:) Plant class II chitinase {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 242

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: Family 19 glycosidase
domain: Plant class II chitinase
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

 Score =  150 bits (379), Expect = 4e-47
 Identities = 66/156 (42%), Positives = 81/156 (51%), Gaps = 24/156 (15%)

Query: 2   RNLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAP 61
              C+V E +K N+YCD      PC  GK YYGRGPIQLT N +Y  AG+A+G D +  P
Sbjct: 82  WGYCFVTERDKSNKYCD---PGTPCPAGKSYYGRGPIQLTHNYNYAQAGRALGVDLINNP 138

Query: 62  ETVARDPVVSFKTALWFWMTYVHPVMN---------------------QGFGATIQRING 100
           + VARD V+SFKTA+WFWMT      +                      GFG     ING
Sbjct: 139 DLVARDAVISFKTAIWFWMTPQGNKPSCHDVITNRWTPSAADVAANRTPGFGVITNIING 198

Query: 101 AIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC 136
            IECG         R G+YK YC+   ++ GPNL C
Sbjct: 199 GIECGRGPSPASGDRIGFYKRYCDVLHLSYGPNLNC 234

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	136
d2baaa_	243	Plant class II chitinase {Barley (Hordeum vulgare)	100.0
d1dxja_	242	Plant class II chitinase {Jack bean (Canavalia ens	100.0

>d2baaa_ d.2.1.1 (A:) Plant class II chitinase {Barley (Hordeum vulgare) [TaxId: 4513]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: Family 19 glycosidase
domain: Plant class II chitinase
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=100.00  E-value=4.2e-47  Score=297.16  Aligned_cols=133  Identities=52%  Similarity=1.005  Sum_probs=124.1

Q ss_pred             CceeeEeecCCCCcccCCCCCCcCCCCCcccccccccccChhHHHHHHHHhCCCCCCCccccccCchhhhHHHHHHHHh-
Q 032636            3 NLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMT-   81 (136)
Q Consensus         3 ~~~y~~E~~~~~~y~~~~~~~~~~~dG~~Y~GRG~iQLTg~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sa~wfW~~-   81 (136)
                      |||+.+|......||+.+ .+|||+||++|+|||+||||||+||++|++++++||++|||+|++||.+|+++|+||||+ 
T Consensus        83 g~~~~~e~~~~~~yc~~~-~~~pc~~G~~Y~GRG~iQLT~~~NY~~~g~~~g~dl~~~Pdlva~d~~~a~~sA~wfW~t~  161 (243)
T d2baaa_          83 GYCFKQERGASSDYCTPS-AQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTA  161 (243)
T ss_dssp             TTCCSBCCSCCCCCCCCC-SSSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHHCC
T ss_pred             cccchhccCCccccccCC-CCCCCCCCCcccCCCcccccchhhHHHHHHHhCCCccccccceeeccHHHHHHHHHHHhcC
Confidence            678888888777899865 799999999999999999999999999999999999999999999999999999999998 


Q ss_pred             -----hhhhhh---------------ccchhhhhhhhcCccccCCCChhhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 032636           82 -----YVHPVM---------------NQGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC  136 (136)
Q Consensus        82 -----~~~~~~---------------~~~f~~~t~~INGgl~c~~~~~~~~~~R~~~y~~~~~~lgv~~g~~l~~  136 (136)
                           ++|++|               .++|+.||+|||||+||.+++++++++|+++|++++++|||++|+||+|
T Consensus       162 ~~~~~s~~~vi~g~w~p~~~d~a~~~~~gfg~tt~iINGg~ec~~~~~~~~~dRi~~Y~~~~~~lgv~~g~nl~C  236 (243)
T d2baaa_         162 QPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC  236 (243)
T ss_dssp             CTTSCCHHHHHTTCCCCCHHHHHTTCCSSHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             CCCCccHHHHHhccCCcccchhhhccCCCcceEEEEEECcccCCCCCchHHHHHHHHHHHHHHHhCCCCCCCcCC
Confidence                 456655               2589999999999999999999999999999999999999999999999

>d1dxja_ d.2.1.1 (A:) Plant class II chitinase {Jack bean (Canavalia ensiformis) [TaxId: 3823]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: Family 19 glycosidase
domain: Plant class II chitinase
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

Probab=100.00  E-value=9.3e-46  Score=289.47  Aligned_cols=131  Identities=52%  Similarity=1.017  Sum_probs=118.9

Q ss_pred             CceeeEeecCCCCcccCCCCCCcCCCCCcccccccccccChhHHHHHHHHhCCCCCCCccccccCchhhhHHHHHHHHh-
Q 032636            3 NLCYVEEINKYNRYCDEQNQQYPCVPGKFYYGRGPIQLTGNGDYGAAGKAIGFDGLRAPETVARDPVVSFKTALWFWMT-   81 (136)
Q Consensus         3 ~~~y~~E~~~~~~y~~~~~~~~~~~dG~~Y~GRG~iQLTg~~NY~~~~~~~g~dl~~~Pdlva~d~~~a~~sa~wfW~~-   81 (136)
                      |+||.+|+.....||+   ..+||+||++|+|||+||||||+||++|++++++||++|||+|++||.+|+++|+||||+ 
T Consensus        83 g~~~~~~~~~~~~~~~---~~~pc~~G~~Y~GRG~iQLTg~~NY~~~~~~lg~dl~~nP~lva~d~~~a~~sA~wfW~~~  159 (242)
T d1dxja_          83 GYCFVTERDKSNKYCD---PGTPCPAGKSYYGRGPIQLTHNYNYAQAGRALGVDLINNPDLVARDAVISFKTAIWFWMTP  159 (242)
T ss_dssp             TTCCSBCSCCCCCCCC---TTSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHHCC
T ss_pred             Ccceeecccccccccc---CCCCCCCCCcccCCCccccchhHHHHHHHHHhCCCcccChHHhhcChHHHHHHHHHHHhcC
Confidence            5667777766666665   458999999999999999999999999999999999999999999999999999999999 


Q ss_pred             -----hhhhhh---------------ccchhhhhhhhcCccccCCCChhhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 032636           82 -----YVHPVM---------------NQGFGATIQRINGAIECGGKQPAQVQARNGYYKDYCNKFGVAPGPNLYC  136 (136)
Q Consensus        82 -----~~~~~~---------------~~~f~~~t~~INGgl~c~~~~~~~~~~R~~~y~~~~~~lgv~~g~~l~~  136 (136)
                           ++|++|               .++|+.||+|||||+||.+++++++++|+++|++++++|||++|+||+|
T Consensus       160 ~~~~~s~~~~i~~~w~p~~~d~~~~~~~gfg~tt~iINGG~ec~~~~~~~~~dRi~~Y~~~~~~Lgv~~g~nl~C  234 (242)
T d1dxja_         160 QGNKPSCHDVITNRWTPSAADVAANRTPGFGVITNIINGGIECGRGPSPASGDRIGFYKRYCDVLHLSYGPNLNC  234 (242)
T ss_dssp             BTTBCCHHHHHTTCCCCCHHHHHTTCCSSHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             CCCCcchhhhhhcCCCCccchhhhcccCCcceeeeEEecccccCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence                 355555               2589999999999999999999999999999999999999999999999