BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032638
MELALQSLSSASFSIITRDLKLRVCTGLHGKAFSSIDIKSQEQERKLPTVSSALPETAAS
VAIAATVVGAAATLLVRRTKGSEETEIPLKTCEDCGGSGICPECKGEGFVLKKLSEETAE
RARLTAKNMATRYTAG

High Scoring Gene Products

Symbol, full name Information P value
AT3G45050 protein from Arabidopsis thaliana 6.8e-24

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032638
        (136 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2075969 - symbol:AT3G45050 "AT3G45050" species...   274  6.8e-24   1


>TAIR|locus:2075969 [details] [associations]
            symbol:AT3G45050 "AT3G45050" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0000023 "maltose metabolic process" evidence=RCA]
            [GO:0010027 "thylakoid membrane organization" evidence=RCA]
            [GO:0019252 "starch biosynthetic process" evidence=RCA]
            EMBL:CP002686 GenomeReviews:BA000014_GR UniGene:At.48735
            EMBL:AK317027 IPI:IPI00534140 RefSeq:NP_190091.2 RefSeq:NP_850657.1
            RefSeq:NP_974386.1 UniGene:At.71157 PaxDb:B9DG54 PRIDE:B9DG54
            EnsemblPlants:AT3G45050.2 EnsemblPlants:AT3G45050.3
            EnsemblPlants:AT3G45050.4 GeneID:823640 KEGG:ath:AT3G45050
            TAIR:At3g45050 eggNOG:NOG300856 HOGENOM:HOG000090025 OMA:KECEACL
            PhylomeDB:B9DG54 ProtClustDB:CLSN2680339 Genevestigator:B9DG54
            Uniprot:B9DG54
        Length = 158

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 59/106 (55%), Positives = 66/106 (62%)

Query:    33 FSSIDIKSQEQERKLP-TVSSALPEXXXXXXXXXXXXXXXXXLLVRRT-KGSEETEIPLK 90
             F ++D+KS  Q  K   TV  AL E                 +LVRR  K SEE E  +K
Sbjct:    25 FLNLDLKSSHQRAKRSSTVVPALAETAVSIAIAATVVGTAATILVRRNNKASEEAEASMK 84

Query:    91 TCEDCGGSGICPECKGEGFVLKKLSEETAERARLTAKNMATRYTAG 136
              CE C GSGICPECKGEGFVLKKLS+  AE+ARL AKNMATRYTAG
Sbjct:    85 ECEACLGSGICPECKGEGFVLKKLSDANAEKARLAAKNMATRYTAG 130


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.131   0.372    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      136       107   0.00091  102 3  11 23  0.47    30
                                                     29  0.40    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  472 (50 KB)
  Total size of DFA:  95 KB (2070 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.62u 0.12s 10.74t   Elapsed:  00:00:01
  Total cpu time:  10.62u 0.12s 10.74t   Elapsed:  00:00:01
  Start:  Thu May  9 19:11:18 2013   End:  Thu May  9 19:11:19 2013

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