BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032643
MLSQEDQLDLACCYIKQLRERIDKLNRMKGQAMKSIKPNSSNNILDETNNICSNLPVVEL
RDLGSSIEVVLISGVQRNFMLYEVISILEEEGAQVVSASFSTIGDKIFHTVRAQAKISRL
GVETSIACQRLHDLVD

High Scoring Gene Products

Symbol, full name Information P value
AT1G10586 protein from Arabidopsis thaliana 1.6e-15
AT4G20970 protein from Arabidopsis thaliana 3.4e-13
AT1G10585 protein from Arabidopsis thaliana 1.9e-12
P0431G06.13-1
Uncharacterized protein
protein from Oryza sativa Japonica Group 6.1e-07
bHLH39
AT3G56980
protein from Arabidopsis thaliana 0.00059
bHLH38
AT3G56970
protein from Arabidopsis thaliana 0.00091

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032643
        (136 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4515102513 - symbol:AT1G10586 species:3702 "Ar...   195  1.6e-15   1
TAIR|locus:2133089 - symbol:AT4G20970 "AT4G20970" species...   173  3.4e-13   1
TAIR|locus:505006117 - symbol:AT1G10585 species:3702 "Ara...   166  1.9e-12   1
UNIPROTKB|Q941Z7 - symbol:P0431G06.13-1 "BHLH transcripti...   118  6.1e-07   1
TAIR|locus:2080615 - symbol:bHLH39 "basic helix-loop-heli...    97  0.00059   1
TAIR|locus:2080600 - symbol:bHLH38 "basic helix-loop-heli...    96  0.00091   1


>TAIR|locus:4515102513 [details] [associations]
            symbol:AT1G10586 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598
            PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
            GenomeReviews:CT485782_GR Gene3D:4.10.280.10 SUPFAM:SSF47459
            EMBL:AC007067 IPI:IPI00524699 PIR:D86239 RefSeq:NP_001117258.1
            UniGene:At.69153 ProteinModelPortal:Q9XIJ1 SMR:Q9XIJ1 PRIDE:Q9XIJ1
            EnsemblPlants:AT1G10586.1 GeneID:6240488 KEGG:ath:AT1G10586
            TAIR:At1g10586 HOGENOM:HOG000064590 OMA:ICRIGID PhylomeDB:Q9XIJ1
            ProtClustDB:CLSN2681497 Genevestigator:Q9XIJ1 Uniprot:Q9XIJ1
        Length = 174

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 46/129 (35%), Positives = 77/129 (59%)

Query:     8 LDLACCYIKQLRERIDKLNRMKGQAMKSIKPNSSNNILDETNNICSNLPVVELRDLGSSI 67
             +D A  Y+ QL+E+++ LN MK + +     N S           S LP + +R L S I
Sbjct:    53 IDQAVSYMIQLKEKVNYLNEMKRRMLGGEVKNRSEG--------SSLLPKLSIRSLDSII 104

Query:    68 EVVLISGVQ-RNFMLYEVISILEEEGAQVVSASFSTIGDKIFHTVRAQAKISRLGVETSI 126
             E+ L+  +  +  ML++++S+ EEEGAQV+SA+   + D+ F+T+ AQA I R+G++ S 
Sbjct:   105 EMNLVMDLNMKGVMLHKLVSVFEEEGAQVMSANLQNLNDRTFYTIIAQAIICRIGIDPSR 164

Query:   127 ACQRLHDLV 135
               +RL D++
Sbjct:   165 IEERLRDII 173


>TAIR|locus:2133089 [details] [associations]
            symbol:AT4G20970 "AT4G20970" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0050832 "defense response to fungus" evidence=IEP]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            EMBL:CP002687 GO:GO:0050832 GO:GO:0003700 Gene3D:4.10.280.10
            SUPFAM:SSF47459 IPI:IPI00520917 RefSeq:NP_193829.2 UniGene:At.54446
            ProteinModelPortal:F4JIJ7 SMR:F4JIJ7 EnsemblPlants:AT4G20970.1
            GeneID:827844 KEGG:ath:AT4G20970 OMA:VQNAHFS Uniprot:F4JIJ7
        Length = 190

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 42/142 (29%), Positives = 78/142 (54%)

Query:     2 LSQEDQLDLACCYIKQLRERIDKLNRMKGQAMKSI---KPNS--SNNILDETN-NICSNL 55
             L+  DQLD A  YIK+L+  ++K    K   + +    K NS  S+++    + ++   L
Sbjct:    47 LTLPDQLDEAANYIKKLQVNVEKKRERKRNLVATTTLEKLNSVGSSSVSSSVDVSVPRKL 106

Query:    56 PVVELRDLGSSIEVVLISGVQRNFMLYEVISILEEE-GAQVVSASFSTIGDKIFHTVRAQ 114
             P +E+++ GS   + L++ ++  FM  E+I +L EE GA++  A +S + D +FHT+  +
Sbjct:   107 PKIEIQETGSIFHIFLVTSLEHKFMFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCK 166

Query:   115 AKISRLGVETSIACQRLHDLVD 136
              +    G  + I  +RL  +V+
Sbjct:   167 VEEHDYGARSQIP-ERLEKIVN 187


>TAIR|locus:505006117 [details] [associations]
            symbol:AT1G10585 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0006865 "amino acid transport" evidence=RCA] InterPro:IPR011598
            PROSITE:PS50888 SMART:SM00353 EMBL:CP002684 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
            IPI:IPI00528194 RefSeq:NP_563873.2 UniGene:At.14985
            ProteinModelPortal:F4I4E1 SMR:F4I4E1 PRIDE:F4I4E1
            EnsemblPlants:AT1G10585.1 GeneID:837600 KEGG:ath:AT1G10585
            OMA:HELVSIF Uniprot:F4I4E1
        Length = 181

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 42/129 (32%), Positives = 75/129 (58%)

Query:     8 LDLACCYIKQLRERIDKLNRMKGQAMKSIKPNSSNNILDETNNICSNLPVVELRDLGSSI 67
             +D A  Y+ QL+E ++ L   K    +++      N+ + +      LP + +R   S+I
Sbjct:    53 IDQATSYMIQLKENVNYLKEKK----RTLLQGELGNLYEGS----FLLPKLSIRSRDSTI 104

Query:    68 EVVLISGVQ-RNFMLYEVISILEEEGAQVVSASFSTIGDKIFHTVRAQAKISRLGVETSI 126
             E+ LI  +  +  ML+E++SI EEEGAQV+SA+   + D+  +T+ AQA ISR+G++ S 
Sbjct:   105 EMNLIMDLNMKRVMLHELVSIFEEEGAQVMSANLQNLNDRTTYTIIAQAIISRIGIDPSR 164

Query:   127 ACQRLHDLV 135
               +R+  ++
Sbjct:   165 IEERVRKII 173


>UNIPROTKB|Q941Z7 [details] [associations]
            symbol:P0431G06.13-1 "BHLH transcription factor-like"
            species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
            evidence=IC] InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010
            PROSITE:PS50888 SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634
            GO:GO:0003677 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
            OMA:HNASERE EMBL:AP003683 STRING:Q941Z7
            EnsemblPlants:LOC_Os01g72370.1 EnsemblPlants:LOC_Os01g72370.2
            Uniprot:Q941Z7
        Length = 248

 Score = 118 (46.6 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 32/127 (25%), Positives = 62/127 (48%)

Query:    14 YIKQLRERIDKLNRMKGQAMKSIKPNSSNNILDETNNICSNLPVVE---LRDLGSSIEVV 70
             YI +L+++++ L R K +   +   N    +L          P+V    + D+   ++V 
Sbjct:   116 YIPELQKQVENLERKKKELTTTSTTNCKPGVLGSQLMSEGMAPIVSATCINDMEIMVQVS 175

Query:    71 LISGVQRNFM-LYEVISILEEEGAQVVSASFST-IGDKIFHTVRAQAKISRLGVETSIAC 128
             L+S V  + + L + I +LE EG   +S+S S+  G++ F+++  Q     +  E    C
Sbjct:   176 LLSNVAGSVLPLSKCIKVLENEGLHFISSSTSSGFGNRTFYSIHLQRSEGTINEECPAFC 235

Query:   129 QRLHDLV 135
             +RL  +V
Sbjct:   236 ERLEKVV 242


>TAIR|locus:2080615 [details] [associations]
            symbol:bHLH39 "basic helix-loop-helix 39" species:3702
            "Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0010106 "cellular response to iron ion
            starvation" evidence=IEP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0055072 "iron ion homeostasis" evidence=IGI]
            InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010 PROSITE:PS50888
            SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
            Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL138655 GO:GO:0055072
            HSSP:P61244 HOGENOM:HOG000238662 ProtClustDB:CLSN2683761
            EMBL:AF488577 IPI:IPI00530143 PIR:T47758 RefSeq:NP_191257.1
            UniGene:At.64158 ProteinModelPortal:Q9M1K0 SMR:Q9M1K0 IntAct:Q9M1K0
            STRING:Q9M1K0 EnsemblPlants:AT3G56980.1 GeneID:824865
            KEGG:ath:AT3G56980 TAIR:At3g56980 eggNOG:NOG265528
            InParanoid:Q9M1K0 OMA:NCEELSQ PhylomeDB:Q9M1K0
            Genevestigator:Q9M1K0 Uniprot:Q9M1K0
        Length = 258

 Score = 97 (39.2 bits), Expect = 0.00059, P = 0.00059
 Identities = 33/123 (26%), Positives = 61/123 (49%)

Query:    14 YIKQLRERIDKLNRMKGQAMKSI--KPNSSNNILDETNNICSNLPVVELRDLGSSIEVVL 71
             YI +L+E++ KL + K + +  I  + N+   +      + + +  V    LG +  +V 
Sbjct:   124 YIPELQEQVKKLIKKKEELLVQISGQRNTECYVKQPPKAVANYISTVSATRLGDNEVMVQ 183

Query:    72 ISGVQ-RNFMLYEVISILEEEGAQVVSASFS-TIGDKIFHTVRAQA-KISRLGVETSIAC 128
             IS  +  NF +  V+S LEE+   +V  S S + G+++F+T+  Q  KI    +      
Sbjct:   184 ISSSKIHNFSISNVLSGLEEDRFVLVDMSSSRSQGERLFYTLHLQVEKIENYKLNCEELS 243

Query:   129 QRL 131
             QR+
Sbjct:   244 QRM 246


>TAIR|locus:2080600 [details] [associations]
            symbol:bHLH38 "basic helix-loop-helix 38" species:3702
            "Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0010106 "cellular response to iron ion
            starvation" evidence=IEP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0055072 "iron ion homeostasis" evidence=IGI]
            InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010 PROSITE:PS50888
            SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
            Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL138655 GO:GO:0055072
            HSSP:P22415 HOGENOM:HOG000238662 ProtClustDB:CLSN2683761
            EMBL:AF488576 EMBL:AK221542 EMBL:BT026419 IPI:IPI00516990
            PIR:T47757 RefSeq:NP_191256.1 UniGene:At.34879
            ProteinModelPortal:Q9M1K1 SMR:Q9M1K1 IntAct:Q9M1K1 STRING:Q9M1K1
            DNASU:824864 EnsemblPlants:AT3G56970.1 GeneID:824864
            KEGG:ath:AT3G56970 TAIR:At3g56970 eggNOG:NOG290862
            InParanoid:Q9M1K1 OMA:KINCEEL PhylomeDB:Q9M1K1
            Genevestigator:Q9M1K1 Uniprot:Q9M1K1
        Length = 253

 Score = 96 (38.9 bits), Expect = 0.00091, P = 0.00091
 Identities = 31/136 (22%), Positives = 67/136 (49%)

Query:     2 LSQEDQLDLACCYIKQLRERIDKLNRMKGQAMKSIKPNSSNNILD--ETNNICSNLPVVE 59
             LS  + +  +  YI +L++++ +L + K + +  +       + D  +   + S L  V 
Sbjct:   107 LSIPETVSKSLKYIPELQQQVKRLIQKKEEILVRVSGQRDFELYDKQQPKAVASYLSTVS 166

Query:    60 LRDLGSSIEVVLISGVQ-RNFMLYEVISILEEEGAQVVSASFS-TIGDKIFHTVRAQAKI 117
                LG +  +V +S  +  NF +  V+  +EE+G  +V  S S + G+++F+T+  Q  +
Sbjct:   167 ATRLGDNEVMVQVSSSKIHNFSISNVLGGIEEDGFVLVDVSSSRSQGERLFYTLHLQ--V 224

Query:   118 SRLGVETSIACQRLHD 133
               +  +  I C+ L +
Sbjct:   225 ENMD-DYKINCEELSE 239


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.363    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      136       136   0.00091  102 3  11 22  0.41    31
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  522 (56 KB)
  Total size of DFA:  109 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.58u 0.09s 15.67t   Elapsed:  00:00:01
  Total cpu time:  15.58u 0.09s 15.67t   Elapsed:  00:00:01
  Start:  Thu May  9 19:24:02 2013   End:  Thu May  9 19:24:03 2013

Back to top