Citrus Sinensis ID: 032648

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130------
Protein Sequence
MGNLSLGKILDCLCISSPGSCSCFCLNTFEGQDEFEKKPLMKSDGGQLLRLKDVVSGNQTLAFQLKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKVKNAELWSASCY
Secondary Structure (PSIPRED)
ccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccHHHHHHHHHHHHccccccEEEEEccccEEEEEEEccHHHHHHHHHccccEEEEccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEcEEEcccccccEEEEEcccccHHHHHcccccccccccEEEEEcccccccccccccccEEEEEEEEEcccHHHHHHHHHHHHcccEEEEEEEccccEEEEEEcccHHHHHHHHHHccccEccccccc
Coil and Loop (DISEMBL)
mgnlslgkildclcisspgscscfclntfegqdefekkplmksdggqllrlkDVVSgnqtlafqlkpKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKVKNAELWSASCY
Flexible Loop (DISEMBL)
MGNLSLGKILDCLCISSPGSCSCFCLNTFEGQDEFEKKPLMKSDGGQLLRLKDVVSGNQTLafqlkpkmvVLRVSMHCNGCARKvekhvsklegvtsykvdlasKMVVVIGDIIPFevlesvskvknaelwsascy
Low Complexity Region (SEG)
MGNLSLGKILDCLCISSPGSCSCFCLNTFEGQDEFEKKPLMKSDGGQLLRLKDVVSGNQTLAFQLKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKVKNAELWSASCY
Disordered region (IsUnstruct)
*****LGKILDCLCISSPGSCSCFCLNTFEGQD************GQLLRLKDVVSGNQTLAFQLKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKVKNAELW*****
Disordered Region (DISOPRED)
****SLG*ILDCLCISSPGSCSC**********************************************VVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKVKNAELWSASCY
Disordered Region (DISEMBL)
MGNLSLGKILDCLCISSPGSCSCFCLNTFEGQDEFEKKPLMKSDGGQLLRLKDVVSGNQTLAFQLKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKVKNAELWSASCY
Disordered Region (DISPRO)
***LSLGKILDCLCISSPGSCSCFCLNTFEGQDEFEKKPLMKSDGGQLLRLKDVVSGNQTLAFQLKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKVKNAELWS****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGNLSLGKILDCLCISSPGSCSCFCLNTFEGQDEFEKKPLMKSDGGQLLRLKDVVSGNQTLAFQLKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKVKNAELWSASCY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	136	2.2.26 [Sep-21-2011]
Q9SZN7	153	Heavy metal-associated is	no	no	0.507	0.450	0.338	0.0005

>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 68  KMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-- 125
           + V ++V M C GC RKV + V  ++GV+S  ++  +  V V+G + P +V+  +S    
Sbjct: 26  QTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTG 85

Query: 126 KNAELWSASCY 136
           K  ELW    Y
Sbjct: 86  KKVELWPYVPY 96

Heavy-metal-binding protein. Binds lead, cadmium and copper. May be involved in heavy-metal transport.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
224143487	138	predicted protein [Populus trichocarpa]	0.977	0.963	0.8	5e-56
255549056	136	chloroplast-targeted copper chaperone, p	0.970	0.970	0.792	9e-54
225445302	134	PREDICTED: uncharacterized protein LOC10	0.955	0.970	0.765	5e-52
357500407	135	hypothetical protein MTR_6g086020 [Medic	0.933	0.940	0.710	2e-46
357521067	132	hypothetical protein MTR_8g103820 [Medic	0.941	0.969	0.723	9e-46
356520571	135	PREDICTED: uncharacterized protein LOC10	0.926	0.933	0.708	9e-46
217070984	135	unknown [Medicago truncatula]	0.933	0.940	0.703	1e-45
356513125	132	PREDICTED: uncharacterized protein LOC10	0.970	1.0	0.703	2e-45
356531236	135	PREDICTED: uncharacterized protein LOC10	0.926	0.933	0.677	1e-43
388495864	135	unknown [Lotus japonicus]	0.933	0.940	0.671	7e-43

>gi|224143487|ref|XP_002324972.1| predicted protein [Populus trichocarpa] gi|222866406|gb|EEF03537.1| predicted protein [Populus trichocarpa]

 Score =  222 bits (565), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 108/135 (80%), Positives = 125/135 (92%), Gaps = 2/135 (1%)

Query: 1   MGNLSLGKILDCLCISSPGS-CSCFCLNTFEGQDE-FEKKPLMKSDGGQLLRLKDVVSGN 58
           MG LSLGK+LDCLC ++PGS CSCFC+N+ + QD+ FEKKPL+ SD G+L+RLKDVV+ N
Sbjct: 1   MGKLSLGKVLDCLCFTTPGSSCSCFCINSLDSQDDGFEKKPLIPSDKGRLVRLKDVVADN 60

Query: 59  QTLAFQLKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEV 118
           QTLAFQLKPKMVVLRVSMHCNGCARKV+KHVSK+EGV+SYKVDL SKMVVVIGDIIPFEV
Sbjct: 61  QTLAFQLKPKMVVLRVSMHCNGCARKVKKHVSKMEGVSSYKVDLESKMVVVIGDIIPFEV 120

Query: 119 LESVSKVKNAELWSA 133
           LESVS+VKNAELW++
Sbjct: 121 LESVSRVKNAELWNS 135

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549056|ref|XP_002515584.1| chloroplast-targeted copper chaperone, putative [Ricinus communis] gi|223545528|gb|EEF47033.1| chloroplast-targeted copper chaperone, putative [Ricinus communis]

 Score =  214 bits (545), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 107/135 (79%), Positives = 121/135 (89%), Gaps = 3/135 (2%)

Query: 1   MGNLSLGKILDCLCISSPGSCSCFCLNTFEGQDEFEKKPLMKSD--GGQLLRLKDVVSGN 58
           MG LS GK+LDCLC++S G+ SCFC+N+ E ++E EK PL+ S+   GQ+LRLKDVVSGN
Sbjct: 1   MGKLSFGKVLDCLCLTS-GTSSCFCMNSLESENEIEKTPLIASEKGHGQVLRLKDVVSGN 59

Query: 59  QTLAFQLKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEV 118
           QTLAFQLKPKMVVLRVSMHC GCARKVEKHVSKLEGVTSYKVDL SKMVVVIGDIIPF+V
Sbjct: 60  QTLAFQLKPKMVVLRVSMHCIGCARKVEKHVSKLEGVTSYKVDLESKMVVVIGDIIPFQV 119

Query: 119 LESVSKVKNAELWSA 133
           LESVSKVKNAELW++
Sbjct: 120 LESVSKVKNAELWNS 134

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445302|ref|XP_002284677.1| PREDICTED: uncharacterized protein LOC100244080 [Vitis vinifera] gi|297738856|emb|CBI28101.3| unnamed protein product [Vitis vinifera]

 Score =  208 bits (530), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 101/132 (76%), Positives = 116/132 (87%), Gaps = 2/132 (1%)

Query: 1   MGNLSLGKILDCLCISSPGSCSCFCLNTFEGQDEFEKKPLMKSDGG-QLLRLKDVVSGNQ 59
           MG LS G++LDC C+SS GS SCFC+N+ E QDEFE+KPL+ SD   QL+RLKDV++  Q
Sbjct: 1   MGKLSFGRVLDCFCLSS-GSTSCFCINSLEAQDEFERKPLIVSDDDRQLVRLKDVIAEKQ 59

Query: 60  TLAFQLKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVL 119
           TLAFQLKPKMVVLRVSMHCNGCARKVEKH+SK+EGVTSY+VDL SKMVVV+GDI+P EVL
Sbjct: 60  TLAFQLKPKMVVLRVSMHCNGCARKVEKHISKMEGVTSYQVDLESKMVVVVGDIVPLEVL 119

Query: 120 ESVSKVKNAELW 131
           ESVSKVK AELW
Sbjct: 120 ESVSKVKVAELW 131

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357500407|ref|XP_003620492.1| hypothetical protein MTR_6g086020 [Medicago truncatula] gi|355495507|gb|AES76710.1| hypothetical protein MTR_6g086020 [Medicago truncatula] gi|388493690|gb|AFK34911.1| unknown [Medicago truncatula]

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 91/128 (71%), Positives = 113/128 (88%), Gaps = 1/128 (0%)

Query: 6   LGKILDCLCISSPGSCSCFCLNTFEGQDEFEKKPLMKSDGGQLLRLKDVVSGNQTLAFQL 65
           LG++L+  C+SS  S +CFC+NT E +DEFEKK L+ S+    LRLKDVV+G QTLAFQL
Sbjct: 4   LGRMLETFCLSS-CSKTCFCMNTTEFEDEFEKKSLISSESDHKLRLKDVVAGKQTLAFQL 62

Query: 66  KPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV 125
           KP++V+LRVSMHC+GCARKVEKH+SKLEGV+SYKVDL +KMVVV+GDI+PFEVLESVSKV
Sbjct: 63  KPQIVILRVSMHCHGCARKVEKHISKLEGVSSYKVDLDTKMVVVMGDILPFEVLESVSKV 122

Query: 126 KNAELWSA 133
           KNAE+W++
Sbjct: 123 KNAEIWNS 130

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357521067|ref|XP_003630822.1| hypothetical protein MTR_8g103820 [Medicago truncatula] gi|355524844|gb|AET05298.1| hypothetical protein MTR_8g103820 [Medicago truncatula]

 Score =  187 bits (476), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 94/130 (72%), Positives = 110/130 (84%), Gaps = 2/130 (1%)

Query: 6   LGKILDCLCISSPGSCSCFCLNTFEGQDEFEKKPLMKSD-GGQLLRLKDVVSGNQTLAFQ 64
           LGK+LD  C+SS GS SCFCLN+    DEFE KPL+ SD   Q L LKDVV+G QTLAFQ
Sbjct: 4   LGKMLDNFCLSS-GSNSCFCLNSINFDDEFESKPLIASDRDDQKLLLKDVVAGKQTLAFQ 62

Query: 65  LKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSK 124
           LKPKMV+LRVSMHC+GCARKVEKH+SKLEGV+SYKVDL +KMV VIGDI+P EVL+SVSK
Sbjct: 63  LKPKMVILRVSMHCHGCARKVEKHISKLEGVSSYKVDLDTKMVAVIGDILPLEVLQSVSK 122

Query: 125 VKNAELWSAS 134
           VKNA+ W+++
Sbjct: 123 VKNAQFWNST 132

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520571|ref|XP_003528935.1| PREDICTED: uncharacterized protein LOC100795735 [Glycine max]

 Score =  187 bits (476), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 90/127 (70%), Positives = 110/127 (86%), Gaps = 1/127 (0%)

Query: 6   LGKILDCLCISSPGSCSCFCLNTFEGQDEFEKKPLMKSDGGQLLRLKDVVSGNQTLAFQL 65
           LG++LD  C+S  GS +CFC+N+ E +DEFEKKPL+ SD    LRLKDVV G QTLAFQL
Sbjct: 4   LGRVLDTFCLSF-GSNTCFCMNSMEFEDEFEKKPLIVSDSDHKLRLKDVVDGKQTLAFQL 62

Query: 66  KPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV 125
           KP++V LRVSMHC+GCA+KVEKH+SKLEGV+SYKVDL +K+VVV+GDI+P EVL+SVSKV
Sbjct: 63  KPQIVTLRVSMHCHGCAKKVEKHISKLEGVSSYKVDLETKIVVVMGDILPSEVLQSVSKV 122

Query: 126 KNAELWS 132
           KNAELW+
Sbjct: 123 KNAELWN 129

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217070984|gb|ACJ83852.1| unknown [Medicago truncatula]

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 90/128 (70%), Positives = 112/128 (87%), Gaps = 1/128 (0%)

Query: 6   LGKILDCLCISSPGSCSCFCLNTFEGQDEFEKKPLMKSDGGQLLRLKDVVSGNQTLAFQL 65
           LG++L+  C+SS  S +CFC+NT E +DEFEKK L+ S+    LRLKDVV+G QTLAFQL
Sbjct: 4   LGRMLETFCLSS-CSKTCFCMNTTEFEDEFEKKSLISSESDHKLRLKDVVAGKQTLAFQL 62

Query: 66  KPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV 125
           KP++V+LRVSMHC+GCARKVEKH+SKLEGV+SYKVDL +KMVVV+GDI+PFEVLESV KV
Sbjct: 63  KPQIVILRVSMHCHGCARKVEKHISKLEGVSSYKVDLDTKMVVVMGDILPFEVLESVFKV 122

Query: 126 KNAELWSA 133
           KNAE+W++
Sbjct: 123 KNAEIWNS 130

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513125|ref|XP_003525264.1| PREDICTED: uncharacterized protein LOC100816650 [Glycine max]

 Score =  186 bits (473), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 95/135 (70%), Positives = 113/135 (83%), Gaps = 3/135 (2%)

Query: 1   MGNLSLGKILDCLCISSPGSCSCFCLNTFEGQDEFEKKPLMKSDGGQLLRLKDVVSGNQT 60
           MG LS   +LD  CISS  S +CFC+N+ E +DEFE KPL+ SD    LRLKDVV+G QT
Sbjct: 1   MGKLSW--MLDKFCISS-CSNTCFCVNSMEFEDEFESKPLIASDSDHKLRLKDVVNGKQT 57

Query: 61  LAFQLKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLE 120
           LAFQLKPK+V+LRVSMHC+GCA++VEKH+SKLEGV+SYKVDL +KMVVV GDI+P EVLE
Sbjct: 58  LAFQLKPKIVILRVSMHCHGCAKRVEKHISKLEGVSSYKVDLETKMVVVCGDILPSEVLE 117

Query: 121 SVSKVKNAELWSASC 135
           SVSKVKNAELW++ C
Sbjct: 118 SVSKVKNAELWNSPC 132

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531236|ref|XP_003534184.1| PREDICTED: uncharacterized protein LOC100788037 [Glycine max]

 Score =  181 bits (458), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 86/127 (67%), Positives = 109/127 (85%), Gaps = 1/127 (0%)

Query: 6   LGKILDCLCISSPGSCSCFCLNTFEGQDEFEKKPLMKSDGGQLLRLKDVVSGNQTLAFQL 65
           L ++LD  C+S  GS +CFC+N+ E +DEFEKKPL+ SD    LRLKDVV G QTLAFQL
Sbjct: 4   LRRVLDTFCLSF-GSNTCFCMNSMEFEDEFEKKPLIVSDSDHKLRLKDVVGGKQTLAFQL 62

Query: 66  KPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV 125
           KP++V LRVSMHC+GCA+K+EKH+SKLEGV+SYKVDL +K++VV+GDI+P EVL+SVSKV
Sbjct: 63  KPQIVTLRVSMHCHGCAKKIEKHISKLEGVSSYKVDLETKIIVVMGDILPSEVLQSVSKV 122

Query: 126 KNAELWS 132
           KNAEL++
Sbjct: 123 KNAELFN 129

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388495864|gb|AFK35998.1| unknown [Lotus japonicus]

 Score =  178 bits (451), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 86/128 (67%), Positives = 109/128 (85%), Gaps = 1/128 (0%)

Query: 6   LGKILDCLCISSPGSCSCFCLNTFEGQDEFEKKPLMKSDGGQLLRLKDVVSGNQTLAFQL 65
           LG++L   C+SS G+ +CFC+N+ + +DE EK PL+ S     LR+KDVV+G QTLAFQL
Sbjct: 4   LGRMLGTFCLSS-GAKTCFCMNSTQFEDELEKNPLIGSGTDHTLRMKDVVAGKQTLAFQL 62

Query: 66  KPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV 125
           KP++V+LRVSMHC+GCA++VEKH+SKLEGV+SYKVDL SKMVVV+GDI+PFEVLESVSKV
Sbjct: 63  KPQIVMLRVSMHCHGCAKQVEKHISKLEGVSSYKVDLDSKMVVVMGDILPFEVLESVSKV 122

Query: 126 KNAELWSA 133
           KNAEL  +
Sbjct: 123 KNAELLKS 130

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
TAIR|locus:2094864	140	AT3G24450 "AT3G24450" [Arabido	0.970	0.942	0.592	2.1e-38
TAIR|locus:2049731	259	NAKR2 "AT2G37390" [Arabidopsis	0.477	0.250	0.553	4.5e-20
TAIR|locus:2181718	319	NAKR1 "SODIUM POTASSIUM ROOT D	0.470	0.200	0.640	6.5e-19
TAIR|locus:2065526	265	AT2G28660 "AT2G28660" [Arabido	0.492	0.252	0.611	2.2e-18
TAIR|locus:2083966	248	NAKR3 "SODIUM POTASSIUM ROOT D	0.477	0.262	0.588	3.7e-16
TAIR|locus:2180265	352	AT5G27690 [Arabidopsis thalian	0.470	0.181	0.430	3.2e-10
TAIR|locus:2205288	106	ATX1 "homolog of anti-oxidant	0.470	0.603	0.430	3.6e-09
TAIR|locus:2082425	473	AT3G06130 [Arabidopsis thalian	0.507	0.145	0.385	1.2e-08
TAIR|locus:4515103273	166	AT3G56891 [Arabidopsis thalian	0.566	0.463	0.375	1.6e-08
TAIR|locus:2179604	587	AT5G19090 [Arabidopsis thalian	0.507	0.117	0.385	3.4e-08

TAIR|locus:2094864 AT3G24450 "AT3G24450" [Arabidopsis thaliana (taxid:3702)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 83/140 (59%), Positives = 110/140 (78%)

Query:     1 MGNLS-LGKILDCLCISSPGSCSCFCLNTF-EGQDEFEKKPLMKSD---GGQLLRLKDVV 55
             MG L  +G++ DCL + +   CSCFCLNT  + ++EFEK+PL+ S     G+++RLKDVV
Sbjct:     1 MGKLQKIGRVWDCLFLPT-NQCSCFCLNTLGDEEEEFEKEPLIDSSTEKSGKVMRLKDVV 59

Query:    56 SGN--QTLAFQLKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDI 113
             + +  QTLAF LKPK+V L+VSMHC GCA+KVEKH+SKL+GVT YKV+L SK VVV G+I
Sbjct:    60 AADHRQTLAFHLKPKIVELKVSMHCYGCAKKVEKHISKLDGVTWYKVELESKKVVVKGNI 119

Query:   114 IPFEVLESVSKVKNAELWSA 133
             +P +VLES+ KVKNA+LWS+
Sbjct:   120 LPVDVLESICKVKNAQLWSS 139

GO:0005507 "copper ion binding" evidence=ISS

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2049731 NAKR2 "AT2G37390" [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
 Identities = 36/65 (55%), Positives = 53/65 (81%)

Query:    68 KMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKVKN 127
             ++VVL+VS+HC GC  KV KH+++++GVTS+ +D A+K V V GDI P E+L+S+SKVKN
Sbjct:   181 QVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKN 240

Query:   128 AELWS 132
             A+ W+
Sbjct:   241 AQFWT 245

GO:0005575 "cellular_component" evidence=ND

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2181718 NAKR1 "SODIUM POTASSIUM ROOT DEFECTIVE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 41/64 (64%), Positives = 52/64 (81%)

Query:    68 KMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKVKN 127
             ++VVLRVS+HC GCA KV+KH+SKL+GVTSY +D A+K V V GD+ P  VL S+SKVKN
Sbjct:   250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKN 309

Query:   128 AELW 131
             A+ W
Sbjct:   310 AQFW 313

GO:0009507 "chloroplast" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009908 "flower development" evidence=IMP

GO:0010015 "root morphogenesis" evidence=IMP

GO:0010233 "phloem transport" evidence=IMP

GO:0055078 "sodium ion homeostasis" evidence=IMP

TAIR|locus:2065526 AT2G28660 "AT2G28660" [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 41/67 (61%), Positives = 54/67 (80%)

Query:    68 KMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKVKN 127
             ++VVLRVS+HC GC  KV KH+SK+EGVTSY +DLA+K V V+G I P  ++ES+SKVK 
Sbjct:   183 QVVVLRVSIHCKGCEGKVRKHISKMEGVTSYTIDLATKKVTVVGKITPVGLVESISKVKF 242

Query:   128 AELWSAS 134
             A+LW +S
Sbjct:   243 AQLWPSS 249

GO:0005507 "copper ion binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2083966 NAKR3 "SODIUM POTASSIUM ROOT DEFECTIVE 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 40/68 (58%), Positives = 53/68 (77%)

Query:    68 KMVVLRVSMHCN--GCARKVEKHVSKLE-GVTSYKVDLASKMVVVIGDIIPFEVLESVSK 124
             ++VVLRVS+HC+  GC  KV+KH+SK++ GVTS+ +D ASK V V GDI P EVL  +SK
Sbjct:   168 QVVVLRVSLHCHCRGCQGKVKKHLSKMQVGVTSFNIDFASKKVTVTGDITPLEVLGCLSK 227

Query:   125 VKNAELWS 132
             VKNA+ W+
Sbjct:   228 VKNAQFWT 235

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2180265 AT5G27690 [Arabidopsis thaliana (taxid:3702)]

 Score = 151 (58.2 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 28/65 (43%), Positives = 46/65 (70%)

Query:    71 VLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAE 129
             VLRVS+HC GC RK++K +SK++GV +  +D+  + V VIG++ P  +++ + K  ++AE
Sbjct:    33 VLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAE 92

Query:   130 LWSAS 134
             LW  S
Sbjct:    93 LWPTS 97

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2205288 ATX1 "homolog of anti-oxidant 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 28/65 (43%), Positives = 41/65 (63%)

Query:    70 VVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNA 128
             VVLRV+M C GC   V++ + K+EGV S+ VD+  + V V G++ P  VL++V+K  K  
Sbjct:    35 VVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGKKT 94

Query:   129 ELWSA 133
               W A
Sbjct:    95 AFWEA 99

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0000785 "chromatin" evidence=IDA

TAIR|locus:2082425 AT3G06130 [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 27/70 (38%), Positives = 47/70 (67%)

Query:    65 LKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSK 124
             +K +  VL+V++HC+GC +KV+K + K+EGV + K+D     V V G + P  +++ ++K
Sbjct:     7 MKIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDSEQGKVTVSGSVDPSVLIKKLAK 66

Query:   125 V-KNAELWSA 133
               K+AE+W A
Sbjct:    67 SGKHAEIWGA 76

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005618 "cell wall" evidence=IDA

TAIR|locus:4515103273 AT3G56891 [Arabidopsis thaliana (taxid:3702)]

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 30/80 (37%), Positives = 45/80 (56%)

Query:    53 DVVSGNQTLAFQLKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
             D + GN  L   L   +V L V M C GC +KV + +SKL+GV + ++D+  + V V G 
Sbjct:     3 DWIHGNSRLPIALS--IVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGY 60

Query:   113 IIPFEVLESVSKV-KNAELW 131
             +   EVL+ V +  + AE W
Sbjct:    61 VDREEVLKMVKRTGRTAEYW 80

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2179604 AT5G19090 [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 3.4e-08, P = 3.4e-08
 Identities = 27/70 (38%), Positives = 47/70 (67%)

Query:    65 LKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSK 124
             +K +  VL+V++HC+GC +KV+K + K+EGV + K+D     V V G++ P  +++ + K
Sbjct:     7 MKIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLK 66

Query:   125 V-KNAELWSA 133
               K+AE+W A
Sbjct:    67 SGKHAEIWGA 76

GO:0005576 "extracellular region" evidence=ISM

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	136
pfam00403	62	pfam00403, HMA, Heavy-metal-associated domain	3e-12
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	1e-11
COG2608	71	COG2608, CopZ, Copper chaperone [Inorganic ion tra	1e-07
PRK11033	741	PRK11033, zntA, zinc/cadmium/mercury/lead-transpor	8e-06
COG2217	713	COG2217, ZntA, Cation transport ATPase [Inorganic	2e-05
PLN02957	238	PLN02957, PLN02957, copper, zinc superoxide dismut	1e-04
TIGR00003	66	TIGR00003, TIGR00003, copper ion binding protein	1e-04
PRK10671	834	PRK10671, copA, copper exporting ATPase; Provision	4e-04
TIGR02052	92	TIGR02052, MerP, mercuric transport protein peripl	0.002

>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain

 Score = 57.2 bits (139), Expect = 3e-12
 Identities = 24/59 (40%), Positives = 34/59 (57%)

Query: 70  VVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKVKNA 128
            +    M C GCA+KVEK +SKL GV+S  VDL +  V V GD  P ++ +    ++ A
Sbjct: 1   TLRVPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKLEKLKKAIEKA 59

Length = 62

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 55.7 bits (135), Expect = 1e-11
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 71  VLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
            L V  M C GC  K+EK + KL GV S +VDL +    V  D
Sbjct: 1   ELSVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYD 43

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

>gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]

 Score = 45.4 bits (108), Expect = 1e-07
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
               L+V  M C  C + VEK + +++GV S  VDL      V  D
Sbjct: 2   MKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFD 47

Length = 71

>gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional

 Score = 43.4 bits (103), Expect = 8e-06
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 76  MHCNGCARKVEKHVSKLEGVTSYKVDLAS-KMVV 108
           M C  CARKVE  V +L GV   +V  A+ K+VV
Sbjct: 62  MDCPSCARKVENAVRQLAGVNQVQVLFATEKLVV 95

Length = 741

>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism]

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           +   L V  M C  CA ++E  ++KL GV   +V+LA++   V+ D
Sbjct: 2   RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYD 46

Length = 713

>gnl|CDD|215516 PLN02957, PLN02957, copper, zinc superoxide dismutase

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 74  VSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIG 111
           V M C GC   V+  +  LEGV + +VDL++++V V+G
Sbjct: 12  VDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLG 49

Length = 238

>gnl|CDD|188014 TIGR00003, TIGR00003, copper ion binding protein

 Score = 37.5 bits (87), Expect = 1e-04
 Identities = 17/35 (48%), Positives = 22/35 (62%)

Query: 75  SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
            M CN C  K+EK V ++EGV+  KV L  + VVV
Sbjct: 8   GMSCNHCVDKIEKFVGEIEGVSKVKVQLEKEKVVV 42

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases [Transport and binding proteins, Cations and iron carrying compounds]. Length = 66

>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 15/49 (30%), Positives = 29/49 (59%)

Query: 76  MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSK 124
           M C  C  +V+  +  + GVT  +V+LA +  +V+G   P +++++V K
Sbjct: 108 MSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEK 156

Length = 834

>gnl|CDD|131107 TIGR02052, MerP, mercuric transport protein periplasmic component

 Score = 35.0 bits (80), Expect = 0.002
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 67  PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
            + V L V  M C  C   VE  + K++GV+  +V   +K+ VV  D
Sbjct: 22  TQTVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFD 68

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403) [Cellular processes, Detoxification]. Length = 92

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	136
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.45
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.34
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	99.0
KOG4656	247	consensus Copper chaperone for superoxide dismutas	98.66
PLN02957	238	copper, zinc superoxide dismutase	98.37
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	98.33
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	98.31
PRK10671	834	copA copper exporting ATPase; Provisional	98.28
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	98.24
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	97.88
TIGR00003	68	copper ion binding protein. This model describes a	97.87
PRK10671	834	copA copper exporting ATPase; Provisional	97.68
TIGR02052	92	MerP mercuric transport protein periplasmic compon	92.67
PRK13748	561	putative mercuric reductase; Provisional	89.99
PRK14054	172	methionine sulfoxide reductase A; Provisional	81.96

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.45  E-value=7.8e-13  Score=81.33  Aligned_cols=57  Identities=46%  Similarity=0.686  Sum_probs=52.8

Q ss_pred             EEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cC
Q 032648           71 VLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KN  127 (136)
Q Consensus        71 ~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~  127 (136)
                      +|+| ||+|++|+++|+++|.+++||.++.+|+.+++++|.++   +++++|.++|+++ |+
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy~   62 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGYE   62 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTSE
T ss_pred             CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCcC
Confidence            4889 99999999999999999999999999999999999997   4669999999988 63

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.34  E-value=1.1e-11  Score=78.86  Aligned_cols=63  Identities=29%  Similarity=0.454  Sum_probs=57.0

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCcee
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAEL  130 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~  130 (136)
                      .+..|.| ||+|.+|+..|+++|.+++||.++++++..+.+.|.++   ++.++|+++|+++ |.+..
T Consensus         2 ~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~~aGy~~~~   69 (71)
T COG2608           2 MKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDAGYKVEE   69 (71)
T ss_pred             ceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHHHcCCCeee
Confidence            3578999 99999999999999999999999999999988888775   6899999999999 87754

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.00  E-value=3.7e-09  Score=67.41  Aligned_cols=67  Identities=46%  Similarity=0.837  Sum_probs=59.1

Q ss_pred             ceEEEEEEcCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc--cCceecCC
Q 032648           67 PKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV--KNAELWSA  133 (136)
Q Consensus        67 ~~~~~l~Vgm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~--~~a~~~~~  133 (136)
                      .+...+.++|+|.+|..+|++.+..++||.++.++...++++|.+..++..+++.+.+.  ..+.+|..
T Consensus         4 ~~~~v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~~~p~~vl~~l~k~~~k~~~~~~~   72 (73)
T KOG1603|consen    4 IKTVVLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGNVDPVKLLKKLKKTGGKRAELWKV   72 (73)
T ss_pred             ccEEEEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEecCHHHHHHHHHhcCCCceEEecC
Confidence            34567788999999999999999999999999999999999999999999999999887  45555544

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=98.66  E-value=1.1e-07  Score=71.46  Aligned_cols=65  Identities=25%  Similarity=0.448  Sum_probs=59.9

Q ss_pred             ceEEEEEEcCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCceec
Q 032648           67 PKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        67 ~~~~~l~Vgm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~~~  131 (136)
                      .-+.+|.|.|+|.+|++.|++.|..++||.++.|++..+.+.|.....+.+|++.|+.. .+|.+.
T Consensus         6 ~~~~efaV~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p~s~i~~~le~tGr~Avl~   71 (247)
T KOG4656|consen    6 TYEAEFAVQMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVPPSEIQNTLENTGRDAVLR   71 (247)
T ss_pred             ceeEEEEEechhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCChHHHHHHHHhhChheEEe
Confidence            34678999999999999999999999999999999999999999988999999999998 888764

>PLN02957 copper, zinc superoxide dismutase

Probab=98.37  E-value=4.1e-06  Score=64.59  Aligned_cols=66  Identities=27%  Similarity=0.507  Sum_probs=59.3

Q ss_pred             ceEEEEEEcCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCceecC
Q 032648           67 PKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAELWS  132 (136)
Q Consensus        67 ~~~~~l~Vgm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~~~~  132 (136)
                      .+++.+.++|.|.+|+.+|++.|.+++||..+.+++..+++.|.+......+.+.+++. |.++++.
T Consensus         5 ~~~~~~~VgMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~   71 (238)
T PLN02957          5 ELLTEFMVDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGRKARLIG   71 (238)
T ss_pred             cEEEEEEECccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecCCHHHHHHHHHHcCCcEEEec
Confidence            45677888999999999999999999999999999999999998877888999999999 9887763

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.33  E-value=1.8e-06  Score=75.65  Aligned_cols=61  Identities=33%  Similarity=0.587  Sum_probs=54.6

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CC-HHHHHHHHHhc-cCce
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---II-PFEVLESVSKV-KNAE  129 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~-~~~I~~~I~~~-~~a~  129 (136)
                      .+..|.| ||+|++|+.+|| +|++++||..+.||+.++++.|.++   .+ .+++...+++. |.+.
T Consensus         2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~~~gy~~~   68 (713)
T COG2217           2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVEKAGYSAR   68 (713)
T ss_pred             ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHHhcCcccc
Confidence            3567999 999999999999 9999999999999999999999986   34 68899999998 8664

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=98.31  E-value=5.8e-06  Score=72.93  Aligned_cols=64  Identities=34%  Similarity=0.424  Sum_probs=52.7

Q ss_pred             ceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecC-CHHHHHHHHHhc-cCcee
Q 032648           67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDI-IPFEVLESVSKV-KNAEL  130 (136)
Q Consensus        67 ~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~-~~~~I~~~I~~~-~~a~~  130 (136)
                      ..+..+.+ ||+|++|+.++++.+.+++||..+.+++.++++.+.++. ..+.+.+.+++. |.+..
T Consensus        52 ~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~~~I~~aI~~~Gy~a~~  118 (741)
T PRK11033         52 GTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAVQKAGFSLRD  118 (741)
T ss_pred             CceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccchHHHHHHHHhccccccc
Confidence            44677899 999999999999999999999999999999998887652 225666777777 76544

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.28  E-value=2.8e-06  Score=75.61  Aligned_cols=62  Identities=16%  Similarity=0.366  Sum_probs=54.6

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCceec
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~~~  131 (136)
                      ++.++.| ||+|++|+.+|++++.+++||.++++++.  +..|.+..+++.+.+++++. |.+...
T Consensus         3 ~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~~~~~~i~~~i~~~Gy~~~~~   66 (834)
T PRK10671          3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGTASAEALIETIKQAGYDASVS   66 (834)
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEecCCHHHHHHHHHhcCCccccc
Confidence            4688999 99999999999999999999999999994  45566667899999999999 988753

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.24  E-value=5.2e-06  Score=73.66  Aligned_cols=87  Identities=23%  Similarity=0.462  Sum_probs=75.4

Q ss_pred             CCCcccHHHHHhhhhhcccccC--------c-eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec--
Q 032648           45 GGQLLRLKDVVSGNQTLAFQLK--------P-KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--  112 (136)
Q Consensus        45 ~~~~~~~~~i~~~~~~~g~~~~--------~-~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~--  112 (136)
                      ++..++...+.+.++..||...        . .+..|.| ||.|.+|+.+|++.+.+++||.++.+++.++++.|.++  
T Consensus       114 dp~v~s~~~~~e~ie~~gf~a~~i~~~~~~~~~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~  193 (951)
T KOG0207|consen  114 DPAVTSPDSIAESIEDLGFSAELIESVNGNSNQKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPE  193 (951)
T ss_pred             CCcccCchhHHHHHHhcCccceehhcccCCCCCcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEeccc
Confidence            4456778888888888888643        1 5788999 99999999999999999999999999999999999987  


Q ss_pred             -CCHHHHHHHHHhc-cCceec
Q 032648          113 -IIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus       113 -~~~~~I~~~I~~~-~~a~~~  131 (136)
                       +.+.++.+.|++. +.+...
T Consensus       194 ~~~pr~i~k~ie~~~~~~~~~  214 (951)
T KOG0207|consen  194 ITGPRDIIKAIEETGFEASVR  214 (951)
T ss_pred             ccChHHHHHHHHhhcccceee
Confidence             7999999999998 876554

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.88  E-value=6.1e-05  Score=67.06  Aligned_cols=87  Identities=26%  Similarity=0.432  Sum_probs=74.4

Q ss_pred             CcccHHHHHhhhhhcccccC--------ceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CC
Q 032648           47 QLLRLKDVVSGNQTLAFQLK--------PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---II  114 (136)
Q Consensus        47 ~~~~~~~i~~~~~~~g~~~~--------~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~  114 (136)
                      ..+....+.+.++..|++..        ..+-.+.+ ||+|.+|+..|++.+++++||.++.|.+...+..+.++   .+
T Consensus        40 ~~~~~~~i~~~ied~gf~~~~~~~~~~~~~~~~l~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~v~~dp~v~s  119 (951)
T KOG0207|consen   40 NIVSPESIKETIEDMGFEASLLSDSEITASKCYLSVNGMTCASCVATIERNLRKIEGVESAVVALSASKAEVIYDPAVTS  119 (951)
T ss_pred             eccCHHHHHHHhhcccceeeecccCccccceeEEEecCceeHHHHHHHHHHhhccCCcceEEEEeeccceeEEECCcccC
Confidence            56677778888888888543        12456899 99999999999999999999999999999999999987   78


Q ss_pred             HHHHHHHHHhc-cCceecCC
Q 032648          115 PFEVLESVSKV-KNAELWSA  133 (136)
Q Consensus       115 ~~~I~~~I~~~-~~a~~~~~  133 (136)
                      ++.+.+.+++. +.+.++..
T Consensus       120 ~~~~~e~ie~~gf~a~~i~~  139 (951)
T KOG0207|consen  120 PDSIAESIEDLGFSAELIES  139 (951)
T ss_pred             chhHHHHHHhcCccceehhc
Confidence            99999999999 98887643

>TIGR00003 copper ion binding protein

Probab=97.87  E-value=0.00027  Score=40.42  Aligned_cols=57  Identities=33%  Similarity=0.490  Sum_probs=47.5

Q ss_pred             EEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc
Q 032648           69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV  125 (136)
Q Consensus        69 ~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~  125 (136)
                      +..+.| |++|..|+..+++.++..+++....+++...++.+.++   .....+...+...
T Consensus         3 ~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   63 (68)
T TIGR00003         3 KFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAILDA   63 (68)
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHHHc
Confidence            456899 99999999999999999999999999999999988874   3556666666554

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=97.68  E-value=0.00032  Score=62.64  Aligned_cols=62  Identities=29%  Similarity=0.548  Sum_probs=53.8

Q ss_pred             EEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCcee
Q 032648           69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAEL  130 (136)
Q Consensus        69 ~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~~  130 (136)
                      +..+.+ ||+|.+|+..+++.+.+++||.++.+++.+++..+.+..++.++.+.+++. |.+.+
T Consensus       100 ~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~~s~~~I~~~I~~~Gy~a~~  163 (834)
T PRK10671        100 SQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEA  163 (834)
T ss_pred             eEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEccCCHHHHHHHHHhcCCCccc
Confidence            456889 999999999999999999999999999999998887556778888888888 77654

>TIGR02052 MerP mercuric transport protein periplasmic component

Probab=92.67  E-value=1.5  Score=26.97  Aligned_cols=63  Identities=29%  Similarity=0.434  Sum_probs=46.0

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCcee
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAEL  130 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~  130 (136)
                      .+..+.+ ++.|..|...++..+...+++....+++......+...   .....+...+.+. +..++
T Consensus        23 ~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   90 (92)
T TIGR02052        23 QTVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATTDAGYPSSL   90 (92)
T ss_pred             eEEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            3556778 99999999999999999999888888888887666542   3445554555555 55433

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).

>PRK13748 putative mercuric reductase; Provisional

Probab=89.99  E-value=2.5  Score=36.02  Aligned_cols=61  Identities=25%  Similarity=0.392  Sum_probs=46.2

Q ss_pred             EEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec--CCHHHHHHHHHhc-cCceec
Q 032648           71 VLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        71 ~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~--~~~~~I~~~I~~~-~~a~~~  131 (136)
                      .+.+ +|+|.+|..+++..+...+++....+++......+.+.  .+...+...++.. +...+.
T Consensus         3 ~i~i~g~~C~~c~~~ie~~l~~~~gv~~a~~~~~~~~~~v~~~~~~~~~~i~~~i~~~g~~~~~~   67 (561)
T PRK13748          3 TLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVGTSPDALTAAVAGLGYRATLA   67 (561)
T ss_pred             EEEECCeecHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCeeecc
Confidence            3568 89999999999999999999999999998888777643  3455555556555 554443

>PRK14054 methionine sulfoxide reductase A; Provisional

Probab=81.96  E-value=3.3  Score=30.54  Aligned_cols=46  Identities=28%  Similarity=0.351  Sum_probs=36.8

Q ss_pred             HhHHHHHHHHHhcCCCceEEEEeCCCcE-------------------EEEEec---CCHHHHHHHHHh
Q 032648           79 NGCARKVEKHVSKLEGVTSYKVDLASKM-------------------VVVIGD---IIPFEVLESVSK  124 (136)
Q Consensus        79 ~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~-------------------v~V~~~---~~~~~I~~~I~~  124 (136)
                      .+|-+-+|..+.+++||.++.+-+.++.                   |.|.+|   ++.++|++..-+
T Consensus        10 gGCFWg~E~~f~~~~GV~~t~vGYagG~~~~PtY~~Vcsg~tgh~E~V~V~yDp~~isy~~Ll~~f~~   77 (172)
T PRK14054         10 GGCFWGMEAPFDRVKGVISTRVGYTGGHVENPTYEQVCSGTTGHAEAVEITYDPAVISYRELLELFFQ   77 (172)
T ss_pred             cCChhhhHHHHccCCCEEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence            6788999999999999999999888775                   567776   577777765543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	136
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	2e-17
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	3e-15
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	8e-14
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	1e-12
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	1e-12
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	1e-10
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	8e-10
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	1e-09
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	3e-09
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	4e-09
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	5e-09
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	9e-08
2kkh_A	95	Putative heavy metal transporter; zinc transport,	5e-09
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	9e-09
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	9e-09
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	1e-08
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	2e-07
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	1e-08
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	1e-08
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	2e-08
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	3e-08
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	3e-08
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	2e-07
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	4e-08
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	4e-08
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	5e-08
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	1e-07
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	2e-07
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	2e-07
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	3e-07
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	3e-07
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	4e-07
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	1e-06
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	1e-06
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	2e-06
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	2e-06
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	3e-06
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	4e-06
2kyz_A	67	Heavy metal binding protein; structural genomics,	3e-05
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	5e-05

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 71.0 bits (174), Expect = 2e-17
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 70  VVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNA 128
           +   V M C  C   V K +  + GV   +V L  +MV+V   +   EV   +    + A
Sbjct: 21  LEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQA 80

Query: 129 ELWSA 133
            L   
Sbjct: 81  VLKGM 85

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68

 Score = 64.7 bits (158), Expect = 3e-15
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 70  VVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNA 128
               V M C GCA  V + ++KL GV  Y +DL +K V +  +     +L ++ K  K  
Sbjct: 4   HEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTV 62

Query: 129 ELWSA 133
                
Sbjct: 63  SYLGL 67

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222

 Score = 64.7 bits (157), Expect = 8e-14
 Identities = 9/55 (16%), Positives = 24/55 (43%)

Query: 70  VVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSK 124
               + MHC  C   ++  +  + G+ S   D+  +++ V   + P  ++ ++  
Sbjct: 8   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRN 62

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73

 Score = 58.2 bits (141), Expect = 1e-12
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 66  KPKMVVLRVSMHCNGCARKVEKHVSKLE-GVTSYKVDLASKMVVVIGDIIPFEVLESVSK 124
           + K     V M C+GC+  V K ++KLE  V+   + L  ++V V   +    +LE + K
Sbjct: 3   EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKK 62

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249

 Score = 61.7 bits (149), Expect = 1e-12
 Identities = 9/55 (16%), Positives = 24/55 (43%)

Query: 70  VVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSK 124
               + MHC  C   ++  +  + G+ S   D+  +++ V   + P  ++ ++  
Sbjct: 9   ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRN 63

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66

 Score = 53.0 bits (128), Expect = 1e-10
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 69  MVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSK 124
           M+ L+V  M CN C   V K + K+ GV   +V L     +V G   P  ++++V +
Sbjct: 1   MLKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEE 57

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85

 Score = 51.4 bits (123), Expect = 8e-10
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 66  KPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSK 124
           +   +   V  M C  CA  ++  + K     +   D AS+ VVV G      + E ++ 
Sbjct: 20  QGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITA 79

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Length = 90

 Score = 50.5 bits (121), Expect = 1e-09
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 70  VVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
               +  MHC  C   +E  +S L+ V+S  V L ++  +V+ +
Sbjct: 5   ATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYN 48

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71

 Score = 49.4 bits (118), Expect = 3e-09
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 67  PKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV 125
            +  V RV  + C  CA K E++V ++EGVT   V+  +  + V G+    +V ++ +  
Sbjct: 2   AEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEASIQQVEQAGAFE 61

Query: 126 K 126
            
Sbjct: 62  H 62

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66

 Score = 48.8 bits (117), Expect = 4e-09
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 76  MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           + CN C  K+EK V ++EGV+   V +  K VVV  D
Sbjct: 10  ITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFD 46

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 51.6 bits (123), Expect = 5e-09
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 51  LKDVVSGNQTLAFQ-LKPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVV 108
                + ++TL  Q      + LR+  MHC  C   +E+++ +L GV S +V L +K   
Sbjct: 2   ANQNFNNSETLGHQGSHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQ 61

Query: 109 VIGD 112
           V  D
Sbjct: 62  VKYD 65

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 48.1 bits (114), Expect = 9e-08
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 70  VVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
            ++ ++ M C  C   +E  +S+LEGV    V LA     V+ +
Sbjct: 124 TLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYN 167

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95

 Score = 49.4 bits (118), Expect = 5e-09
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 70  VVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
               V  + C      +E  +  L+GV  Y V + S+ V+V+ D
Sbjct: 18  SYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHD 61

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71

 Score = 48.0 bits (115), Expect = 9e-09
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           + + L+V  M C  C   +E  V +L GV   KV LA   V V  D
Sbjct: 5   EQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTID 50

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69

 Score = 48.1 bits (115), Expect = 9e-09
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           +   L+V  M C  C + VE  V +L+GV++  V+L +  V V  D
Sbjct: 2   EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFD 47

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 49.7 bits (119), Expect = 1e-08
 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 4/64 (6%)

Query: 66  KPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLES 121
           + K + ++VS M C  CA ++EK + ++ GVT   V+LA++ V VI D        + E 
Sbjct: 4   EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEK 63

Query: 122 VSKV 125
           + K+
Sbjct: 64  IEKL 67

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 46.3 bits (110), Expect = 2e-07
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 63  FQLKPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
           + +  +     +  M C  CA ++EK ++K+EGV +  V+ A + V V
Sbjct: 69  YHVVTEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTV 116

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75

 Score = 47.7 bits (114), Expect = 1e-08
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 70  VVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           V + V  M CN C   +E+ + K+ GV   KV L  K   +I D
Sbjct: 4   VTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYD 47

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Length = 73

 Score = 47.4 bits (113), Expect = 1e-08
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 76  MHCNGCARKVEKHVSKLEGVTSYKVDLAS-KMVVVIGDIIPFEVLESVSKV 125
           M C  CARKVE  V +L GV   +V  A+ K+VV   + I  +V  ++ K 
Sbjct: 12  MDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKA 62

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79

 Score = 47.7 bits (114), Expect = 2e-08
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 70  VVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           V + V  M CN C   +E+ + K+ GV   KV L  K   +I D
Sbjct: 10  VTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYD 53

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Length = 69

 Score = 46.5 bits (111), Expect = 3e-08
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 69  MVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASK--MVVVIGDIIPFEVLESVSK 124
           M  L+++ M C+ CA  V++ + K+ GV S  V        + ++    P  +  +V+ 
Sbjct: 1   MTHLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAG 59

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 48.1 bits (115), Expect = 3e-08
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 67  PKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           P+   L++  M C  C   +E+++ K  GV S  V L +    +  D
Sbjct: 3   PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYD 49

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 46.2 bits (110), Expect = 2e-07
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 70  VVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           + L ++ M C  C   +E  +++  G+T   V LA+   +V  D
Sbjct: 82  IELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFD 125

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72

 Score = 46.5 bits (111), Expect = 4e-08
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           + V L V  M C+ C   V+K +SK+EGV+   V   ++  VV  D
Sbjct: 3   QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFD 48

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Length = 72

 Score = 46.5 bits (111), Expect = 4e-08
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           +  V+ +  M CN C + +E  +SK  GV S +V LA+    V  D
Sbjct: 3   QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYD 48

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Length = 84

 Score = 46.6 bits (111), Expect = 5e-08
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
            ++ ++V  M C+ C   +E  + KL+GV   KV L ++   ++  
Sbjct: 9   VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQ 54

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Length = 68

 Score = 45.3 bits (108), Expect = 1e-07
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 76  MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           M CN C  ++E+ V ++ GV   KV L  +  VV  D
Sbjct: 9   MSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFD 45

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Length = 72

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVI--GDIIPFEVLESVSK 124
           + V+L V  M C+ C   +   +  L+GVT   + L +    V    ++    + E +  
Sbjct: 2   REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIED 61

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} Length = 74

 Score = 44.6 bits (106), Expect = 2e-07
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           + + + V+ M C  C+  VE  +  + GV    V L      V+ D
Sbjct: 2   RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFD 47

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64

 Score = 43.9 bits (104), Expect = 3e-07
 Identities = 12/49 (24%), Positives = 23/49 (46%)

Query: 76  MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSK 124
           + C  CA  V K V   +   + +VDL SK V +   +   ++  +++ 
Sbjct: 10  IACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIAS 58

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Length = 71

 Score = 43.8 bits (104), Expect = 3e-07
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           K   ++V  M C  CA  +E+ + +L+GV    V +A+  + V  D
Sbjct: 3   KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYD 48

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Length = 77

 Score = 43.8 bits (104), Expect = 4e-07
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 4/59 (6%)

Query: 70  VVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSK 124
             ++V+ M C  C   +E+++ + EG+ S  V L +    V  +   I P  + E + +
Sbjct: 5   CYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRE 63

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Length = 76

 Score = 42.3 bits (100), Expect = 1e-06
 Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 66  KPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           + K + ++VS M C  CA ++EK + ++ GVT   V+LA++ V VI D
Sbjct: 4   EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYD 51

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Length = 71

 Score = 42.3 bits (100), Expect = 2e-06
 Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASK--MVVVIGDIIPFEVLESVSK 124
           + + L++  M C  CA  +E+ ++K+ GV S +V+ A +  +V   G+  P  + ++V +
Sbjct: 3   QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVER 62

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 67  PKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLAS-KMVVVI--GDIIPFEVLESV 122
           P    +RV+ M C  C + +E  V  LEGV   +V+LA+    +      I    +   +
Sbjct: 1   PMERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVI 60

Query: 123 SK 124
             
Sbjct: 61  ED 62

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Length = 80

 Score = 41.5 bits (98), Expect = 3e-06
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLAS-KMVV 108
           +     +  M C  CA ++EK ++K+EGV +  V+ A   + V
Sbjct: 3   EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTV 45

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Length = 75

 Score = 41.2 bits (97), Expect = 4e-06
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
            ++ L V  M C  C  K+E  ++K  G+    V LA+    +  D
Sbjct: 4   GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYD 49

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Length = 67

 Score = 38.6 bits (90), Expect = 3e-05
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 70  VVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
            VL V  + CN C  ++ K + +L GV +Y+V +  K VVV  +
Sbjct: 3   YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETE 45

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Length = 73

 Score = 38.1 bits (89), Expect = 5e-05
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 70  VVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVV 109
           +VL +S + C+ C  +V+K + +  G    KVDL   +V  
Sbjct: 7   IVLELSGLSCHHCVARVKKALEEA-GAKVEKVDLNEAVVAG 46

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	136
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	99.52
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.47
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.46
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	99.43
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	99.38
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	99.37
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	99.35
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	99.33
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	99.3
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	99.29
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	99.28
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	99.28
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	99.27
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	99.26
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	99.25
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	99.24
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	99.23
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	99.23
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	99.23
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	99.22
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	99.22
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	99.22
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	99.22
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	99.2
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	99.19
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	99.19
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	99.18
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	99.18
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	99.15
2kyz_A	67	Heavy metal binding protein; structural genomics,	99.15
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	99.15
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	99.12
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	99.11
2kkh_A	95	Putative heavy metal transporter; zinc transport,	99.06
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	99.05
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	98.96
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.91
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	98.84
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.72
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.69
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.65
1ff3_A	211	Peptide methionine sulfoxide reductase; alpha beta	81.67

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=99.52  E-value=5.9e-14  Score=86.39  Aligned_cols=64  Identities=30%  Similarity=0.495  Sum_probs=59.8

Q ss_pred             eEEEEEEcCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCceecC
Q 032648           68 KMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAELWS  132 (136)
Q Consensus        68 ~~~~l~Vgm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~~~~  132 (136)
                      .+.+|.|||+|.+|+.+|+++|++++|| ++++|+.+++++|.++.++++|.++|+++ |.+.++.
T Consensus         2 ~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~   66 (68)
T 3iwl_A            2 PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLG   66 (68)
T ss_dssp             CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEE
T ss_pred             ceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecC
Confidence            3567888999999999999999999999 99999999999999989999999999999 9998874

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.47  E-value=2.2e-13  Score=84.43  Aligned_cols=66  Identities=23%  Similarity=0.380  Sum_probs=60.8

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceecCC
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELWSA  133 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~~~  133 (136)
                      ++..|.| ||+|++|+.+|+++|++++||.++.+|+.++++.|.++   +++++|.++|+++ |.+.++..
T Consensus         2 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   72 (74)
T 3dxs_X            2 RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILAE   72 (74)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred             cEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEccC
Confidence            5678999 99999999999999999999999999999999999985   5899999999999 99887653

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.46  E-value=5.4e-13  Score=81.49  Aligned_cols=64  Identities=27%  Similarity=0.497  Sum_probs=58.7

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec--CCHHHHHHHHHhc-cCceec
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~--~~~~~I~~~I~~~-~~a~~~  131 (136)
                      +++.|.| ||+|.+|+.+|+++|.+++||..+.+|+.++++.|.++  .++++|.++|+++ |.+.++
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~   69 (69)
T 4a4j_A            2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL   69 (69)
T ss_dssp             EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred             CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence            4678999 99999999999999999999999999999999999964  7899999999999 987753

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=99.43  E-value=5e-13  Score=83.13  Aligned_cols=66  Identities=24%  Similarity=0.374  Sum_probs=61.2

Q ss_pred             CceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCceecCC
Q 032648           66 KPKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAELWSA  133 (136)
Q Consensus        66 ~~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~~~~~  133 (136)
                      .+++.+|.| ||+|++|+.+|+++|++ +||..+.||+.+++++|.++ ++++|.++|+++ |.+.+.+.
T Consensus         3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~   70 (73)
T 3fry_A            3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS   70 (73)
T ss_dssp             CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred             ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence            356788999 99999999999999999 99999999999999999998 899999999999 99888764

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=99.38  E-value=2.8e-12  Score=81.33  Aligned_cols=72  Identities=22%  Similarity=0.377  Sum_probs=65.1

Q ss_pred             cCceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceecCCCCC
Q 032648           65 LKPKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELWSASCY  136 (136)
Q Consensus        65 ~~~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~~~p~~  136 (136)
                      ....++.|.| ||+|.+|+.+|+++|.+++||..+.+++..+++.|.++   ++.+.|.+.|+++ |.+.+...|.|
T Consensus         6 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~   82 (84)
T 1q8l_A            6 AGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQPKY   82 (84)
T ss_dssp             SSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCCTTT
T ss_pred             cCceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCCccc
Confidence            3456788999 99999999999999999999999999999999999885   5788999999999 99988888765

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=99.37  E-value=3.5e-12  Score=88.57  Aligned_cols=85  Identities=22%  Similarity=0.355  Sum_probs=75.1

Q ss_pred             cccHHHHHhhhhhcccccCceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHH
Q 032648           48 LLRLKDVVSGNQTLAFQLKPKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVS  123 (136)
Q Consensus        48 ~~~~~~i~~~~~~~g~~~~~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~  123 (136)
                      .+...++...++..||.....++.|.| ||+|++|+.+|+++|.+++||.++.+|+.++++.|.++   +++++|.++|+
T Consensus        54 ~~~~~~i~~~i~~~G~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~  133 (151)
T 1p6t_A           54 ETGTAAIQEKIEKLGYHVVTEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD  133 (151)
T ss_dssp             TSCHHHHHHHHHHHTCEECCEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCcccccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHH
Confidence            345677777788889977677889999 99999999999999999999999999999999999986   57899999999


Q ss_pred             hc-cCceecC
Q 032648          124 KV-KNAELWS  132 (136)
Q Consensus       124 ~~-~~a~~~~  132 (136)
                      ++ |.+.+..
T Consensus       134 ~~Gy~~~~~~  143 (151)
T 1p6t_A          134 KLGYKLKLKG  143 (151)
T ss_dssp             HHTCCEEESC
T ss_pred             HcCCCeEEcC
Confidence            99 9887753

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=99.35  E-value=8.7e-12  Score=77.13  Aligned_cols=66  Identities=29%  Similarity=0.399  Sum_probs=60.3

Q ss_pred             ceEEEEEEcCcCHhHHHHHHHHHhcCC-CceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCceecC
Q 032648           67 PKMVVLRVSMHCNGCARKVEKHVSKLE-GVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAELWS  132 (136)
Q Consensus        67 ~~~~~l~Vgm~C~~Ca~~Ie~~L~~l~-GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~~~~  132 (136)
                      ..+..|.|.|+|++|+.+|+++|++++ ||.++.+|+.+++++|.+..+++++.++|+++ |.+.++.
T Consensus         4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~   71 (73)
T 1cc8_A            4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK   71 (73)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred             ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence            356678889999999999999999999 99999999999999999888899999999999 9887753

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=99.33  E-value=7.2e-12  Score=86.53  Aligned_cols=84  Identities=23%  Similarity=0.403  Sum_probs=71.8

Q ss_pred             cccHHHHHhhhhhcccccC--------ceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCH
Q 032648           48 LLRLKDVVSGNQTLAFQLK--------PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIP  115 (136)
Q Consensus        48 ~~~~~~i~~~~~~~g~~~~--------~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~  115 (136)
                      .++..++...++..||...        ..++.|.| ||+|++|+.+|+++|++++||.++.+|+.++++.|.++   +++
T Consensus        52 ~~~~~~i~~~i~~~G~~~~~~~~~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~  131 (149)
T 2ew9_A           52 VIQPLEIAQFIQDLGFEAAVMEDYAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGP  131 (149)
T ss_dssp             TCCHHHHHHHHHHHTCEEEECSCSCCSSSEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCH
T ss_pred             CCCHHHHHHHHhcCCCceEeecccccccceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCH
Confidence            4556778888888888542        25678999 99999999999999999999999999999999999986   578


Q ss_pred             HHHHHHHHhc-cCceec
Q 032648          116 FEVLESVSKV-KNAELW  131 (136)
Q Consensus       116 ~~I~~~I~~~-~~a~~~  131 (136)
                      ++|.++|+++ |.+.++
T Consensus       132 ~~i~~~i~~~Gy~~~~~  148 (149)
T 2ew9_A          132 RDIIKIIEEIGFHASLA  148 (149)
T ss_dssp             HHHHHHHHHHTCEEECC
T ss_pred             HHHHHHHHhCCCceEec
Confidence            9999999999 877653

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=99.30  E-value=2.4e-11  Score=73.63  Aligned_cols=64  Identities=27%  Similarity=0.418  Sum_probs=57.8

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceec
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~  131 (136)
                      ++..|.| ||+|++|+.+|++.|.+++||.++.+++..+++.|.++   .+.+.|.+.|+++ |.+.+.
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   71 (72)
T 1osd_A            3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence            4678999 99999999999999999999999999999999999875   5778899999999 987653

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.29  E-value=2.6e-11  Score=80.01  Aligned_cols=68  Identities=25%  Similarity=0.357  Sum_probs=61.8

Q ss_pred             CceEEEEEEcCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCceecCC
Q 032648           66 KPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAELWSA  133 (136)
Q Consensus        66 ~~~~~~l~Vgm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~~~~~  133 (136)
                      ...++.|.|.|+|.+|+.+|+++|.+++||.++.+|+.+++++|.++.+++.|.++|+++ |.+.++..
T Consensus        17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~   85 (98)
T 2crl_A           17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGM   85 (98)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEES
T ss_pred             cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccC
Confidence            345677888999999999999999999999999999999999999988899999999999 99887643

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=99.28  E-value=2.6e-11  Score=73.46  Aligned_cols=64  Identities=30%  Similarity=0.427  Sum_probs=57.5

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceec
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~  131 (136)
                      ++..|.| ||+|++|+.+|+++|.+++||.++.+++..+++.|.++   .+.+.|.+.|+++ |.+.+.
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   71 (72)
T 1aw0_A            3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred             eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence            4568999 99999999999999999999999999999999999886   5778899999999 876653

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=99.28  E-value=3.6e-11  Score=72.50  Aligned_cols=63  Identities=27%  Similarity=0.506  Sum_probs=56.0

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec--CCHHHHHHHHHhc-cCcee
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKV-KNAEL  130 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~--~~~~~I~~~I~~~-~~a~~  130 (136)
                      ++..|.| ||+|++|+.+|+++|.+++||.++.+++..+++.|.++  .+.+.|.+.|+++ |.+.+
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~   69 (71)
T 2xmw_A            3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV   69 (71)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEE
T ss_pred             cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCcee
Confidence            4567999 99999999999999999999999999999999999876  5678899999998 87654

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=99.27  E-value=1.7e-11  Score=72.53  Aligned_cols=59  Identities=24%  Similarity=0.411  Sum_probs=54.8

Q ss_pred             EEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCc
Q 032648           70 VVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNA  128 (136)
Q Consensus        70 ~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a  128 (136)
                      ..|.| ||+|++|+.+|+++|.+++||.++.+++.++++.|.+..+.+.|.++|+++ |.+
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~   63 (64)
T 2xmm_A            3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV   63 (64)
T ss_dssp             EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred             EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            56899 999999999999999999999999999999999998777889999999998 865

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=99.26  E-value=5.8e-11  Score=72.83  Aligned_cols=64  Identities=30%  Similarity=0.525  Sum_probs=57.8

Q ss_pred             EEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceecC
Q 032648           69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELWS  132 (136)
Q Consensus        69 ~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~~  132 (136)
                      +..|.| ||+|.+|+.+|+++|.+++||..+.+++..+++.|.++   .+.+.|.+.|+++ |.+.+..
T Consensus         3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   71 (75)
T 3cjk_B            3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   71 (75)
T ss_dssp             EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred             EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence            567999 99999999999999999999999999999999999875   4778899999999 9876653

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=99.25  E-value=5.7e-11  Score=71.88  Aligned_cols=62  Identities=27%  Similarity=0.448  Sum_probs=55.7

Q ss_pred             ceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCc
Q 032648           67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNA  128 (136)
Q Consensus        67 ~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a  128 (136)
                      +.+..|.| ||+|++|+.+|+++|.+++||..+.+++..+++.|.++   .+.+.|.+.|+++ |.+
T Consensus         4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   70 (71)
T 2l3m_A            4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV   70 (71)
T ss_dssp             EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence            45678999 99999999999999999999999999999999999875   5778899999988 754

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=99.24  E-value=7.1e-11  Score=72.31  Aligned_cols=65  Identities=32%  Similarity=0.397  Sum_probs=57.1

Q ss_pred             ceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecC-CHHHHHHHHHhc-cCceec
Q 032648           67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDI-IPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        67 ~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~-~~~~I~~~I~~~-~~a~~~  131 (136)
                      +.++.|.| ||+|++|+.+|+++|.+++||..+.+++.++++.|.++. ..+.|.+.|+++ |.+...
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~   69 (73)
T 1mwy_A            2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE   69 (73)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEEC
T ss_pred             CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccc
Confidence            45678999 999999999999999999999999999999999998863 367788999998 877654

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=99.23  E-value=5.6e-11  Score=71.96  Aligned_cols=64  Identities=23%  Similarity=0.446  Sum_probs=58.0

Q ss_pred             EEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec--CCHHHHHHHHHhc-cCceecC
Q 032648           69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKV-KNAELWS  132 (136)
Q Consensus        69 ~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~--~~~~~I~~~I~~~-~~a~~~~  132 (136)
                      +..|.| ||+|++|+.+|++.|.+++||.++.+++..+++.|.++  .+.+.|.+.|++. |.+.++.
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~   70 (72)
T 1fvq_A            3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence            567999 99999999999999999999999999999999999875  5678899999999 9887764

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=99.23  E-value=1.9e-11  Score=73.61  Aligned_cols=61  Identities=31%  Similarity=0.478  Sum_probs=55.1

Q ss_pred             EEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCceec
Q 032648           71 VLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        71 ~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~~~  131 (136)
                      .|.| ||+|++|+.+|+++|.+++||.++.+++.++++.|....+++.|.++|+++ |.+..+
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~   65 (66)
T 2roe_A            3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL   65 (66)
T ss_dssp             CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence            4889 999999999999999999999999999999999995457889999999999 877653

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=99.23  E-value=2.5e-11  Score=78.05  Aligned_cols=63  Identities=22%  Similarity=0.261  Sum_probs=57.1

Q ss_pred             CceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCc
Q 032648           66 KPKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNA  128 (136)
Q Consensus        66 ~~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a  128 (136)
                      ...+..|.| ||+|++|+.+|+++|.+++||.++.+|+.++++.|.++++++.|.++|+++ |.+
T Consensus        20 ~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~   84 (85)
T 2k2p_A           20 QGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP   84 (85)
T ss_dssp             --CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred             cccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            345678999 999999999999999999999999999999999999888899999999998 864

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=99.22  E-value=3.8e-11  Score=74.25  Aligned_cols=66  Identities=23%  Similarity=0.359  Sum_probs=59.2

Q ss_pred             ceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceecC
Q 032648           67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELWS  132 (136)
Q Consensus        67 ~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~~  132 (136)
                      +++..|.| ||+|++|+.+|+++|.+++||..+.+++..+++.|.++   .+.+.|.++|+++ |.+.++.
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   72 (77)
T 1y3j_A            2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE   72 (77)
T ss_dssp             CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred             CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence            45678999 99999999999999999999999999999999999875   5778899999999 9877654

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=99.22  E-value=6.5e-11  Score=71.37  Aligned_cols=61  Identities=25%  Similarity=0.347  Sum_probs=55.3

Q ss_pred             EEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec--CCHHHHHHHHHhc-cCceec
Q 032648           71 VLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        71 ~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~--~~~~~I~~~I~~~-~~a~~~  131 (136)
                      .|.| ||+|++|+.+|+++|.+++||.++.+++..+++.|.++  ...++|.+.|+++ |.+.+.
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~   67 (69)
T 2kt2_A            3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA   67 (69)
T ss_dssp             CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred             EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence            4889 99999999999999999999999999999999999876  5778899999999 877654

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=99.22  E-value=6.4e-11  Score=73.44  Aligned_cols=67  Identities=28%  Similarity=0.491  Sum_probs=59.7

Q ss_pred             CceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceecC
Q 032648           66 KPKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELWS  132 (136)
Q Consensus        66 ~~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~~  132 (136)
                      ...+..|.| ||+|++|+.+|+++|.+++||.++.+++.++++.|.++   .+.+.|.++|+++ |.+.+..
T Consensus         6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   77 (79)
T 1kvi_A            6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   77 (79)
T ss_dssp             TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred             CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence            356778999 99999999999999999999999999999999999875   4678899999999 9876653

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=99.22  E-value=7.4e-11  Score=70.52  Aligned_cols=60  Identities=30%  Similarity=0.540  Sum_probs=54.8

Q ss_pred             EEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCcee
Q 032648           71 VLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAEL  130 (136)
Q Consensus        71 ~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~  130 (136)
                      .|.| ||+|++|+.+|++.|.+++||.++.+++..+++.|.++   .+.+.+.+.|++. |.+.+
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   67 (68)
T 1cpz_A            3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV   67 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred             EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence            5889 99999999999999999999999999999999999885   5788899999998 87664

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=99.20  E-value=1.5e-10  Score=68.70  Aligned_cols=60  Identities=27%  Similarity=0.462  Sum_probs=54.0

Q ss_pred             EEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCc
Q 032648           69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNA  128 (136)
Q Consensus        69 ~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a  128 (136)
                      +..|.| ||+|++|+.+|+++|.+++||..+.+++..+++.|.++   .+.+.+.+.|+++ |.+
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   67 (69)
T 2qif_A            3 QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             EEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence            467999 99999999999999999999999999999999999875   4678899999888 754

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=99.19  E-value=1e-10  Score=75.50  Aligned_cols=58  Identities=24%  Similarity=0.501  Sum_probs=53.1

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV  125 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~  125 (136)
                      .++.|.| ||+|++|+.+|+++|.+++||.++.+++.++++.|.++   ++.+.|.++|+++
T Consensus         3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~   64 (90)
T 2g9o_A            3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAV   64 (90)
T ss_dssp             EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTT
T ss_pred             cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhc
Confidence            4567999 99999999999999999999999999999999999875   4778899999887

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=99.19  E-value=9.3e-11  Score=69.69  Aligned_cols=60  Identities=32%  Similarity=0.458  Sum_probs=53.7

Q ss_pred             EEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec--CCHHHHHHHHHhc-cCc
Q 032648           69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKV-KNA  128 (136)
Q Consensus        69 ~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~--~~~~~I~~~I~~~-~~a  128 (136)
                      +..|.| ||+|++|+.+|+++|.+++||..+.+++.++++.|.++  .+.+.|.+.|+++ |.+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~   65 (66)
T 1yg0_A            2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV   65 (66)
T ss_dssp             EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred             eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence            456889 99999999999999999999999999999999999876  4678899999888 754

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=99.18  E-value=1.2e-10  Score=71.03  Aligned_cols=64  Identities=25%  Similarity=0.440  Sum_probs=56.3

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceec
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~  131 (136)
                      .+..|.| ||+|++|+.+|+++|.+++||..+.+++..+++.|.++   .+.+.|.+.|+++ |.+.+.
T Consensus         4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   72 (75)
T 1yjr_A            4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLV   72 (75)
T ss_dssp             CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEES
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceee
Confidence            3467999 99999999999999999999999999999999999886   3567889999998 876553

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=99.18  E-value=1.5e-10  Score=70.49  Aligned_cols=65  Identities=31%  Similarity=0.495  Sum_probs=57.8

Q ss_pred             ceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceec
Q 032648           67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        67 ~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~  131 (136)
                      ..+..|.| ||+|++|+.+|+++|.+++||..+.+++..+++.|.++   .+.+.|.+.|+++ |.+.++
T Consensus         5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   74 (76)
T 1opz_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE   74 (76)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred             ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence            45678999 99999999999999999999999999999999999875   4788899999998 876543

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=99.15  E-value=1.3e-10  Score=69.64  Aligned_cols=62  Identities=24%  Similarity=0.465  Sum_probs=55.1

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCce
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAE  129 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~  129 (136)
                      .+..|.| ||+|++|+.+|+++|.+++||..+.+++..+++.|.++   .+.+.+.+.++++ |.+.
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~   69 (71)
T 2ldi_A            3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA   69 (71)
T ss_dssp             EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred             EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence            4567999 99999999999999999999999999999999999875   4678899999988 7653

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=99.15  E-value=9.5e-11  Score=70.78  Aligned_cols=61  Identities=31%  Similarity=0.537  Sum_probs=54.4

Q ss_pred             EEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCceec
Q 032648           69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        69 ~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~~~  131 (136)
                      +..|.| ||+|++|+.+|+++|.++ ||..+.+++.++++.|.++.. +.|.++|+++ |.+..+
T Consensus         2 ~~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~~   64 (67)
T 2kyz_A            2 RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVESY   64 (67)
T ss_dssp             EEEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCBC
T ss_pred             eEEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceeeE
Confidence            356999 999999999999999999 999999999999999988755 7899999998 877554

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=99.15  E-value=2e-10  Score=70.96  Aligned_cols=65  Identities=28%  Similarity=0.445  Sum_probs=57.9

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceecC
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELWS  132 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~~  132 (136)
                      .+..|.| ||+|++|+.+|+++|.+++||..+.+++..+++.|.++   .+.+.+.+.|+++ |.+.++.
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~   72 (80)
T 1jww_A            3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG   72 (80)
T ss_dssp             EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECC
T ss_pred             eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecC
Confidence            4567999 99999999999999999999999999999999999875   4778899999999 8876653

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=99.12  E-value=6.5e-10  Score=81.30  Aligned_cols=65  Identities=28%  Similarity=0.481  Sum_probs=58.9

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceecC
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELWS  132 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~~  132 (136)
                      .++.|.| ||+|++|+.+|+++|.+++||..+.|++..+++.|.++   +++++|.++|+++ |.+.++.
T Consensus       122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~  191 (202)
T 2rop_A          122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVS  191 (202)
T ss_dssp             EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC-
T ss_pred             eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcC
Confidence            4578999 99999999999999999999999999999999999885   5788999999999 9887764

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=99.06  E-value=1.1e-09  Score=70.79  Aligned_cols=66  Identities=24%  Similarity=0.463  Sum_probs=59.1

Q ss_pred             ceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceecC
Q 032648           67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELWS  132 (136)
Q Consensus        67 ~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~~  132 (136)
                      +.+..|.| ||+|++|+.+|+++|..++||..+.+++..+++.|.++   ++.+.|.++|+++ |.+.+..
T Consensus        15 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   85 (95)
T 2kkh_A           15 LQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRV   85 (95)
T ss_dssp             SEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred             eEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEec
Confidence            55678999 99999999999999999999999999999999999876   4678899999999 9876653

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=99.05  E-value=7.1e-10  Score=67.46  Aligned_cols=59  Identities=31%  Similarity=0.548  Sum_probs=50.7

Q ss_pred             EEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCceec
Q 032648           69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        69 ~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~~~  131 (136)
                      +..|.| ||+|.+|+.+|+++|.+++||.++.+++..+++.|.++..    .+.|+++ |.+.+.
T Consensus         4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~~~   64 (71)
T 2aj0_A            4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEHLK   64 (71)
T ss_dssp             EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTTCE
T ss_pred             EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCcccc
Confidence            567999 9999999999999999999999999999999999988754    4566777 765543

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.96  E-value=3.6e-09  Score=79.69  Aligned_cols=65  Identities=17%  Similarity=0.476  Sum_probs=59.6

Q ss_pred             eEEEEEEcCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCceecC
Q 032648           68 KMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAELWS  132 (136)
Q Consensus        68 ~~~~l~Vgm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~~~~  132 (136)
                      .+..|.|.|+|.+|+.+|+++|++++||.++.+++.+++++|.+..++++|.++|+++ |.+.++.
T Consensus         6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~   71 (222)
T 1qup_A            6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRG   71 (222)
T ss_dssp             EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEEC
T ss_pred             eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCcccccc
Confidence            4566788899999999999999999999999999999999999888899999999999 9987764

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.91  E-value=5.6e-09  Score=71.77  Aligned_cols=65  Identities=26%  Similarity=0.476  Sum_probs=57.7

Q ss_pred             ceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceec
Q 032648           67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        67 ~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~  131 (136)
                      ++++.|.| ||+|++|+.+|+++|.+++||..+.+++.++++.|.++   .+++.+.+.|++. |.+.+.
T Consensus         3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   72 (149)
T 2ew9_A            3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVM   72 (149)
T ss_dssp             CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred             cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEee
Confidence            45678999 99999999999999999999999999999999999874   5678899999998 876653

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.84  E-value=1.2e-08  Score=78.06  Aligned_cols=64  Identities=17%  Similarity=0.481  Sum_probs=58.8

Q ss_pred             eEEEEEEcCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCceec
Q 032648           68 KMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        68 ~~~~l~Vgm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~~~  131 (136)
                      .++.|.|.|+|.+|+.+|+++|++++||.++.+++.+++++|....++++|.++|+++ |.+.++
T Consensus         7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~   71 (249)
T 1jk9_B            7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIR   71 (249)
T ss_dssp             EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEE
T ss_pred             eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccc
Confidence            4566777899999999999999999999999999999999999878899999999999 988765

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.72  E-value=3.4e-08  Score=72.05  Aligned_cols=59  Identities=29%  Similarity=0.530  Sum_probs=53.0

Q ss_pred             ceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc
Q 032648           67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV  125 (136)
Q Consensus        67 ~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~  125 (136)
                      ..++.|.| ||+|.+|+.+|+++|.+++||..+.|++..+++.|.++   +.+..+.++|+++
T Consensus        19 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~   81 (202)
T 2rop_A           19 VVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEAL   81 (202)
T ss_dssp             -CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTS
T ss_pred             cEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHh
Confidence            45678999 99999999999999999999999999999999999875   5678899988876

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.69  E-value=4.5e-08  Score=84.48  Aligned_cols=62  Identities=26%  Similarity=0.362  Sum_probs=56.8

Q ss_pred             EEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCcee
Q 032648           69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAEL  130 (136)
Q Consensus        69 ~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~  130 (136)
                      +.+|.| ||+|++|+.+||++|++++||.+++||+.++++.|.++   .+++++.++|++. |.+..
T Consensus         3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~   69 (723)
T 3j09_A            3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVD   69 (723)
T ss_dssp             CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESS
T ss_pred             eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCcccc
Confidence            467999 99999999999999999999999999999999999986   5889999999998 87643

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.65  E-value=1.1e-07  Score=65.64  Aligned_cols=61  Identities=33%  Similarity=0.545  Sum_probs=53.6

Q ss_pred             ceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cC
Q 032648           67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KN  127 (136)
Q Consensus        67 ~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~  127 (136)
                      ..+..|.| ||+|++|+.+|++.|.+++||..+.+++..+++.|.++   .+...+.+.+++. |.
T Consensus         5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~   70 (151)
T 1p6t_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYH   70 (151)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCE
T ss_pred             ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCc
Confidence            35677999 99999999999999999999999999999999998865   4678888888887 74

>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A

Probab=81.67  E-value=5.2  Score=29.45  Aligned_cols=46  Identities=24%  Similarity=0.190  Sum_probs=35.4

Q ss_pred             HhHHHHHHHHHhcCCCceEEEEeCCCc-------------------EEEEEec---CCHHHHHHHHHh
Q 032648           79 NGCARKVEKHVSKLEGVTSYKVDLASK-------------------MVVVIGD---IIPFEVLESVSK  124 (136)
Q Consensus        79 ~~Ca~~Ie~~L~~l~GV~~v~v~~~~~-------------------~v~V~~~---~~~~~I~~~I~~  124 (136)
                      .+|-+-+|..+.+++||.++.+-+.++                   .|.|.+|   ++.++|++..-+
T Consensus        49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~  116 (211)
T 1ff3_A           49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWE  116 (211)
T ss_dssp             CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred             cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence            567777888899999999999988744                   3667776   677777776543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	136
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	5e-15
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	2e-12
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	7e-12
d1osda_	72	d.58.17.1 (A:) Mercuric ion binding protein MerP {	2e-11
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	2e-11
d2ggpb1	72	d.58.17.1 (B:1-72) Copper transporter domain ccc2a	3e-11
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	2e-10
d1mwza_	73	d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,	3e-10
d1q8la_	84	d.58.17.1 (A:) Menkes copper-transporting ATPase {	5e-10
d2qifa1	69	d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt	6e-10
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	8e-10
d1cpza_	68	d.58.17.1 (A:) Copper chaperone {Enterococcus hira	9e-10
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	5e-09
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	1e-08

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.9 bits (153), Expect = 5e-15
 Identities = 12/69 (17%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 66  KPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV 125
                   + MHC  C   ++  +  + G+ S   D+  +++ V   + P  ++ ++   
Sbjct: 4   DTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNC 63

Query: 126 -KNAELWSA 133
            K+A +  A
Sbjct: 64  GKDAIIRGA 72

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.3 bits (136), Expect = 2e-12
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 66  KPKMVVLRVSMHCNGCARKVEKHVSKLE-GVTSYKVDLASKMVVVIGDIIPFEVLESVSK 124
           + K     V M C+GC+  V K ++KLE  V+   + L  ++V V   +    +LE + K
Sbjct: 2   EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKK 61

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 54.8 bits (132), Expect = 7e-12
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 67  PKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV- 125
           PK     V M C GCA  V + ++KL G   Y +DL +K V +  +     +L ++ K  
Sbjct: 1   PK-HEFSVDMTCGGCAEAVSRVLNKLGG-VKYDIDLPNKKVCIESEHSMDTLLATLKKTG 58

Query: 126 KNAELW 131
           K     
Sbjct: 59  KTVSYL 64

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

 Score = 54.0 bits (130), Expect = 2e-11
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 70  VVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           V L V  M C+ C   V+K +SK+EGV+   V   ++  VV  D
Sbjct: 5   VTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFD 48

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 54.0 bits (130), Expect = 2e-11
 Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 66  KPKMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           + K + ++VS M C  CA ++EK + ++ GVT   V+LA++ V VI D
Sbjct: 4   EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYD 51

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.2 bits (128), Expect = 3e-11
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVI--GDIIPFEVLESVSK 124
           + V+L V  M C+ C   +   +  L+GVT   + L +    V    ++    + E +  
Sbjct: 2   REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIED 61

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (123), Expect = 2e-10
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
             V + V  M CN C   +E+ + K+ GV   KV L  K   +I D
Sbjct: 8   NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYD 53

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 51.0 bits (122), Expect = 3e-10
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 76  MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD-IIPFEVLESVSK 124
           M C  CARKVE  V +L GV   +V  A++ +VV  D  I  +V  ++ K
Sbjct: 12  MDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQK 61

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 5e-10
 Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKVK 126
            ++ ++V  M C+ C   +E  + KL+GV   KV L ++   ++       V E   +++
Sbjct: 9   VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE 68

Query: 127 NA 128
             
Sbjct: 69  AM 70

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

 Score = 49.8 bits (119), Expect = 6e-10
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 68  KMVVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           +   L+V  M C  C + VE  V +L+GV++  V+L +  V V  D
Sbjct: 2   EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFD 47

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (118), Expect = 8e-10
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 70  VVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
            V+ +  M CN C + +E  +SK  GV S +V LA+    V  D
Sbjct: 5   TVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYD 48

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

 Score = 49.4 bits (118), Expect = 9e-10
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 76  MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
           M CN C  ++E+ V ++ GV   KV L  +  VV  D
Sbjct: 9   MSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFD 45

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 47.6 bits (113), Expect = 5e-09
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 70  VVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD 112
               +  M C  CA ++EK ++K+EGV +  V+ A + V V  +
Sbjct: 4   AEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYN 47

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 46.5 bits (110), Expect = 1e-08
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 70  VVLRVS-MHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSK 124
           + L V  + C  CA  V K V   +   + +VDL SK V +   +   ++  +++ 
Sbjct: 3   IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIAS 58

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	136
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.63
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.62
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.61
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.61
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.6
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.6
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	99.59
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.59
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.56
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.55
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.55
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.55
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.53
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.51
d1ff3a_	211	Peptide methionine sulfoxide reductase {Escherichi	85.45

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.63  E-value=7e-16  Score=94.55  Aligned_cols=62  Identities=31%  Similarity=0.512  Sum_probs=59.1

Q ss_pred             EEEEEEcCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCceec
Q 032648           69 MVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        69 ~~~l~Vgm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~~~  131 (136)
                      +++|+|+|+|.+|+.+|+++|++++|+ ++.+|+.+++++|.+++++++|+++|+++ |.+.++
T Consensus         2 k~ef~V~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~~~~~i~~~I~~~Gy~a~li   64 (66)
T d1fe0a_           2 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYL   64 (66)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEE
T ss_pred             CEEEEEccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeCCHHHHHHHHHHhCCeEEEe
Confidence            578999999999999999999999998 69999999999999999999999999999 999876

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.62  E-value=6.8e-16  Score=95.95  Aligned_cols=66  Identities=23%  Similarity=0.444  Sum_probs=61.6

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec--CCHHHHHHHHHhc-cCceecCC
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD--IIPFEVLESVSKV-KNAELWSA  133 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~--~~~~~I~~~I~~~-~~a~~~~~  133 (136)
                      +++.|.| ||+|++|+.+|+++|.+++||.+++||+.++++.|.++  +++++|.++|+++ |.++++..
T Consensus         2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~a~~~~~   71 (72)
T d2ggpb1           2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILRD   71 (72)
T ss_dssp             EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHTTCCCEEEEC
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHHhCCCeEEccc
Confidence            5788999 99999999999999999999999999999999999976  7899999999999 99988753

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.61  E-value=1.7e-15  Score=94.21  Aligned_cols=65  Identities=17%  Similarity=0.474  Sum_probs=61.2

Q ss_pred             ceEEEEEEcCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCceec
Q 032648           67 PKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        67 ~~~~~l~Vgm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~~~  131 (136)
                      ..+.+|.|+|+|++|+.+|+++|.+++||.++.||+.+++++|.+++++++|+++|+++ |+|.+.
T Consensus         5 ~~~~~f~V~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~~~G~~A~l~   70 (72)
T d1qupa2           5 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIR   70 (72)
T ss_dssp             CEEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEE
T ss_pred             cEEEEEEEccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHHHhCCCEEEe
Confidence            34678999999999999999999999999999999999999999999999999999999 999875

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.61  E-value=2.2e-15  Score=93.61  Aligned_cols=65  Identities=26%  Similarity=0.412  Sum_probs=60.9

Q ss_pred             ceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceec
Q 032648           67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        67 ~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~  131 (136)
                      .+++.|.| ||+|++|+.+|++.|++++||.+++||+.++++.|.++   +++++|.+.|+++ |++.+.
T Consensus         2 tqt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v~   71 (72)
T d1osda_           2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhcCCCeEeC
Confidence            46789999 99999999999999999999999999999999999985   6899999999999 999875

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.60  E-value=1.9e-15  Score=92.86  Aligned_cols=61  Identities=30%  Similarity=0.522  Sum_probs=57.6

Q ss_pred             EEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceec
Q 032648           71 VLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        71 ~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~  131 (136)
                      .|.| ||+|++|+.+|+++|++++||.+++||+.+++++|.++   +++++|.++|+++ |+++++
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~vi   68 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEEC
Confidence            5899 99999999999999999999999999999999999986   6899999999999 998864

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.4e-15  Score=93.34  Aligned_cols=65  Identities=29%  Similarity=0.421  Sum_probs=60.3

Q ss_pred             ceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceec
Q 032648           67 PKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        67 ~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~  131 (136)
                      .++..|+| ||+|++|+.+|+++|.+++||.+++||+.++++.|.++   +++++|.++|+++ |++.+.
T Consensus         2 t~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~l~   71 (72)
T d2aw0a_           2 TQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSEEEEC
T ss_pred             cEEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEeC
Confidence            35788999 99999999999999999999999999999999999986   6899999999999 998764

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.59  E-value=5.7e-15  Score=91.86  Aligned_cols=64  Identities=28%  Similarity=0.427  Sum_probs=59.9

Q ss_pred             CceEEEEEEcCcCHhHHHHHHHHHhcC-CCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCce
Q 032648           66 KPKMVVLRVSMHCNGCARKVEKHVSKL-EGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAE  129 (136)
Q Consensus        66 ~~~~~~l~Vgm~C~~Ca~~Ie~~L~~l-~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~  129 (136)
                      ..++++|+|+|+|.+|+.+|+++|.++ +||.++.+|+.+++++|.+++++++|.++|+++ |++.
T Consensus         2 ~~kt~~f~V~MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~   67 (72)
T d1cc8a_           2 EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVR   67 (72)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEE
T ss_pred             CcEEEEEEECcCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCHHHHHHHHHHHCCccC
Confidence            357889999999999999999999999 599999999999999999999999999999999 8875

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2.9e-15  Score=95.74  Aligned_cols=71  Identities=21%  Similarity=0.346  Sum_probs=65.2

Q ss_pred             cCceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceecCCCC
Q 032648           65 LKPKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELWSASC  135 (136)
Q Consensus        65 ~~~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~~~p~  135 (136)
                      .....+.|+| ||+|++|+.+|+++|.+++||.+++||+.+++++|.++   ++++.|.++|+++ |.+.+...|.
T Consensus         6 ~~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~~~~k   81 (84)
T d1q8la_           6 AGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQPK   81 (84)
T ss_dssp             SSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCCTT
T ss_pred             CCCEEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHHhCCccEEcCCcc
Confidence            3567889999 99999999999999999999999999999999999986   6889999999999 9999887664

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.56  E-value=1e-14  Score=89.69  Aligned_cols=61  Identities=26%  Similarity=0.461  Sum_probs=57.2

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCc
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNA  128 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a  128 (136)
                      ++.+|+| ||+|++|+.+|+++|++++||.++++|+.++++.|.++   ++.++|.+.|+++ |.+
T Consensus         2 ~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~~   67 (69)
T d2qifa1           2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             cEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            5778999 99999999999999999999999999999999999986   6899999999999 865

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.55  E-value=3e-15  Score=90.98  Aligned_cols=61  Identities=25%  Similarity=0.428  Sum_probs=57.8

Q ss_pred             EEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHhc-cCce
Q 032648           69 MVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGDIIPFEVLESVSKV-KNAE  129 (136)
Q Consensus        69 ~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~~~~~~I~~~I~~~-~~a~  129 (136)
                      +++|.| ||+|++|+.+|+++|++++||.++.+|+.+++++|.+++++++|.++|+++ |.++
T Consensus         2 t~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~~GY~ve   64 (64)
T d1sb6a_           2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGHEVE   64 (64)
T ss_dssp             EEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHHHCCCCC
T ss_pred             eEEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHHcCCCCC
Confidence            468999 999999999999999999999999999999999999999999999999999 8764

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.7e-14  Score=90.99  Aligned_cols=67  Identities=28%  Similarity=0.491  Sum_probs=62.6

Q ss_pred             CceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceecC
Q 032648           66 KPKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELWS  132 (136)
Q Consensus        66 ~~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~~  132 (136)
                      ..++++|.| ||+|++|+.+|+++|++++||.+++||+.++++.|.++   +++.+|.++|+++ |++.+..
T Consensus         6 ~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~GY~~~~~~   77 (79)
T d1kvja_           6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   77 (79)
T ss_dssp             TCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred             CceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhcCCCcEeCC
Confidence            567899999 99999999999999999999999999999999999986   7999999999999 9987754

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.55  E-value=1.1e-14  Score=91.89  Aligned_cols=66  Identities=27%  Similarity=0.438  Sum_probs=61.3

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCceecCC
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNAELWSA  133 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a~~~~~  133 (136)
                      .++.|.| ||+|++|+.+|+++|..++||.+++||+.++++.|.++   ++.++|.++|+++ |++.+...
T Consensus         2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   72 (79)
T d1p6ta2           2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE   72 (79)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCS
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHHHCCceEECCc
Confidence            4688999 99999999999999999999999999999999999985   6899999999999 99988654

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.53  E-value=1.8e-14  Score=89.23  Aligned_cols=63  Identities=32%  Similarity=0.535  Sum_probs=58.1

Q ss_pred             CceEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHhc-cCc
Q 032648           66 KPKMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD---IIPFEVLESVSKV-KNA  128 (136)
Q Consensus        66 ~~~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~---~~~~~I~~~I~~~-~~a  128 (136)
                      ..++++|+| ||+|++|+.+|+++|.+++||.+++|++.++++.|.++   +++++|.++|+++ |.+
T Consensus         4 ~~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~Gy~v   71 (72)
T d1p6ta1           4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (72)
T ss_dssp             CCEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             CceEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            356889999 99999999999999999999999999999999999985   6899999999998 853

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.51  E-value=3.9e-14  Score=88.02  Aligned_cols=64  Identities=33%  Similarity=0.406  Sum_probs=58.5

Q ss_pred             eEEEEEE-cCcCHhHHHHHHHHHhcCCCceEEEEeCCCcEEEEEec-CCHHHHHHHHHhc-cCceec
Q 032648           68 KMVVLRV-SMHCNGCARKVEKHVSKLEGVTSYKVDLASKMVVVIGD-IIPFEVLESVSKV-KNAELW  131 (136)
Q Consensus        68 ~~~~l~V-gm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~~~v~V~~~-~~~~~I~~~I~~~-~~a~~~  131 (136)
                      ++++|.| ||+|++|+.+|+++|.+++||.++.||+.+++++|.++ ...++|.++|+++ |.+...
T Consensus         3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~~~GY~v~~~   69 (73)
T d1mwza_           3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE   69 (73)
T ss_dssp             CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCCCCBC
T ss_pred             CEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHHHcCCcccCC
Confidence            4688999 99999999999999999999999999999999999987 4578999999999 987654

>d1ff3a_ d.58.28.1 (A:) Peptide methionine sulfoxide reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Peptide methionine sulfoxide reductase
family: Peptide methionine sulfoxide reductase
domain: Peptide methionine sulfoxide reductase
species: Escherichia coli [TaxId: 562]

Probab=85.45  E-value=1.4  Score=30.78  Aligned_cols=55  Identities=22%  Similarity=0.248  Sum_probs=40.0

Q ss_pred             cCceEEEEEEcCcCHhHHHHHHHHHhcCCCceEEEEeCCC-------------------cEEEEEec---CCHHHHHHHH
Q 032648           65 LKPKMVVLRVSMHCNGCARKVEKHVSKLEGVTSYKVDLAS-------------------KMVVVIGD---IIPFEVLESV  122 (136)
Q Consensus        65 ~~~~~~~l~Vgm~C~~Ca~~Ie~~L~~l~GV~~v~v~~~~-------------------~~v~V~~~---~~~~~I~~~I  122 (136)
                      ..+++..|.     .+|-+-+|..+.+++||.++.+-+..                   +.|.|.+|   ++.++|++..
T Consensus        40 ~~~e~a~fa-----gGCFWg~E~~f~~l~GV~~t~~GYaGG~~~nPtY~~VcsG~TgH~E~V~V~yDp~~isy~~Ll~~F  114 (211)
T d1ff3a_          40 DGMEIAIFA-----MGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVF  114 (211)
T ss_dssp             TTCEEEEEE-----CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHH
T ss_pred             CCCeEEEEe-----ccchhhhhHHHhcCCCEEEEeceecCCCCCCCCccccccCCCCCceeEEEEeccccCCHHHHHHHH
Confidence            345555554     67888899999999999999997663                   34456776   6778887766


Q ss_pred             Hh
Q 032648          123 SK  124 (136)
Q Consensus       123 ~~  124 (136)
                      -+
T Consensus       115 ~~  116 (211)
T d1ff3a_         115 WE  116 (211)
T ss_dssp             HH
T ss_pred             HH
Confidence            43