BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032660
(136 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1
Length = 234
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/138 (73%), Positives = 110/138 (79%), Gaps = 2/138 (1%)
Query: 1 MLEPGRPPKTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQR 60
+LEPG PPKTDKA IL D VRM+ QLR EAQKLK S LQ+KIKELK EKNELRDEKQR
Sbjct: 97 ILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQR 156
Query: 61 LKADKEKLEQQVKAMSAPS-GFLPHPSSMSAAFA-AQSQVASNKLVPFIGYPGVAMWQFM 118
LK +KEKLEQQ+KAM+AP F P P M AFA AQ Q NK+VP I YPGVAMWQFM
Sbjct: 157 LKTEKEKLEQQLKAMNAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFM 216
Query: 119 PPAAVDTSQDHVLRPPVA 136
PPA+VDTSQDHVLRPPVA
Sbjct: 217 PPASVDTSQDHVLRPPVA 234
>sp|Q9C682|BH115_ARATH Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115
PE=2 SV=1
Length = 226
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 107/140 (76%), Gaps = 9/140 (6%)
Query: 1 MLEPGRPPKTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQR 60
+LEPGR PKTDK I++D +RM+ Q R EAQKLK LQEKIKELK EKNELRDEKQ+
Sbjct: 92 VLEPGRTPKTDKVAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQK 151
Query: 61 LKADKEKLEQQVKAM-SAPS---GFLPHPSSMSAAFAAQSQVASNKLVPFIGYPGVAMWQ 116
LK +KE+++QQ+KA+ + P FLP+P ++S Q+Q +KLVPF YPG AMWQ
Sbjct: 152 LKVEKERIDQQLKAIKTQPQPQPCFLPNPQTLS-----QAQAPGSKLVPFTTYPGFAMWQ 206
Query: 117 FMPPAAVDTSQDHVLRPPVA 136
FMPPAAVDTSQDHVLRPPVA
Sbjct: 207 FMPPAAVDTSQDHVLRPPVA 226
>sp|Q8L467|BH104_ARATH Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104
PE=2 SV=1
Length = 283
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 95/137 (69%), Gaps = 10/137 (7%)
Query: 1 MLEPGRPPKTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQR 60
+LEPGR PKTDK IL D +R++ QLR EA KL+++ + L E+IK LKAEKNELR+EK
Sbjct: 156 VLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLV 215
Query: 61 LKADKEKLEQQVKAMSAP-SGFLPHPSSMSAAFAAQSQVASNKLVPFIGYPGVAMWQFMP 119
LKADKEK EQQ+K+M+AP SGF+PH + AAF NK+ + Y + MW +MP
Sbjct: 216 LKADKEKTEQQLKSMTAPSSGFIPH---IPAAF------NHNKMAVYPSYGYMPMWHYMP 266
Query: 120 PAAVDTSQDHVLRPPVA 136
+ DTS+D LRPP A
Sbjct: 267 QSVRDTSRDQELRPPAA 283
>sp|Q9LTC7|BH034_ARATH Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2
SV=1
Length = 320
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 95/140 (67%), Gaps = 11/140 (7%)
Query: 1 MLEPGRPPKTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQR 60
+LEPGR PKTDK+ IL D +R++ QLR EA +L+++ + L E+IK LKA+KNELR+EK
Sbjct: 188 VLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLV 247
Query: 61 LKADKEKLEQQVKAMSAPS-GFLP--HPSSMSAAFAAQSQVASNKLVPFIGY-PGVAMWQ 116
LKA+KEK+EQQ+K+M PS GF+P HP AAF + + P+ Y P + MW
Sbjct: 248 LKAEKEKMEQQLKSMVVPSPGFMPSQHP----AAFHSHKMAVA---YPYGYYPPNMPMWS 300
Query: 117 FMPPAAVDTSQDHVLRPPVA 136
+PPA DTS+D PPVA
Sbjct: 301 PLPPADRDTSRDLKNLPPVA 320
>sp|Q9LT23|BH121_ARATH Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121
PE=2 SV=1
Length = 337
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Query: 1 MLEPGRPPKTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQR 60
+L+P RP K DKATIL+D V+++++L +E KLK L ++ +EL EKN+LR+EK
Sbjct: 84 VLDPERP-KNDKATILTDTVQLLKELTSEVNKLKSEYTALTDESRELTQEKNDLREEKTS 142
Query: 61 LKADKEKL----EQQVKAMSAPSGFLPH 84
LK+D E L +Q++++MS + H
Sbjct: 143 LKSDIENLNLQYQQRLRSMSPWGAAMDH 170
>sp|Q8W2F2|BH011_ARATH Transcription factor bHLH11 OS=Arabidopsis thaliana GN=BHLH11 PE=2
SV=2
Length = 286
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 66/109 (60%), Gaps = 10/109 (9%)
Query: 2 LEPGRPPKTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRL 61
L+P RP K+DKA++L+D ++M++ + + +LK E L ++ +EL EK+ELR+EK L
Sbjct: 71 LDPNRP-KSDKASVLTDTIQMLKDVMNQVDRLKAEYETLSQESRELIQEKSELREEKATL 129
Query: 62 KADKEKLEQQ----VKAMSAPSGFLPHPSSMSAAFAAQSQVASNKLVPF 106
K+D E L Q +K M P ++PH S F A +Q S+ +P+
Sbjct: 130 KSDIEILNAQYQHRIKTM-VP--WVPH-YSYHIPFVAITQGQSS-FIPY 173
>sp|Q60443|KIFC1_CRIGR Kinesin-like protein KIFC1 OS=Cricetulus griseus PE=2 SV=1
Length = 622
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 4 PGRPPKTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKE-------LKAEKNELRD 56
PG+ P D L D+ ++ R + QKL Q + LQE++KE L E+N L
Sbjct: 81 PGKRPDWDLKGQLCDLTEELKCYREKTQKLDQENQGLQEQLKEAQEQAAALGTERNTLEG 140
Query: 57 EKQRLKADKEKLEQQVKAMSA 77
E ++ E+ +Q+++A+ A
Sbjct: 141 ELASVRTQAEQCQQKLEALCA 161
>sp|Q3V0F0|RIMB3_MOUSE RIMS-binding protein 3 OS=Mus musculus GN=Rimbp3 PE=2 SV=1
Length = 1490
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 9 KTDKATILSDVVRMMEQLRTEAQKLKQS--TEDLQEKIKELKAEKNELRDEKQRLKADKE 66
++ A L +VR LR E L++ +E+ EK+K LK + EL D QRL+
Sbjct: 244 NSELAEALQVLVRRCCDLREENLHLRRKGFSEEAGEKVKWLKVKHAELTDLAQRLEDRAR 303
Query: 67 KL-EQQVKAMSAP 78
KL E ++AMSAP
Sbjct: 304 KLQETNLRAMSAP 316
>sp|P45444|DYHC_EMENI Dynein heavy chain, cytoplasmic OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nudA
PE=3 SV=2
Length = 4345
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 12/137 (8%)
Query: 11 DKATILSDVVRMME----QLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKE 66
D+ L D V +E Q + EAQ ++ + DL+ I K+E L E Q +KA+ E
Sbjct: 3406 DRVGPLRDEVGQLEEQALQTKAEAQAIENTINDLESSIATYKSEYAALISETQAIKAEME 3465
Query: 67 ----KLEQQVKAMSAPSGFLPHPSSMSAAFAAQ-SQVASNKLV--PFIGYPGVAMWQFMP 119
K+++ V+ + + S S +F Q S + + L+ F+ Y G QF
Sbjct: 3466 RVQFKVDRSVRLLDSLSSERTRWEEGSKSFETQISTLIGDVLIAAAFLAYAGFYDQQFRK 3525
Query: 120 PAAVDTSQDHVLRPPVA 136
D Q H+++ ++
Sbjct: 3526 AMTEDWVQ-HLVQSGIS 3541
>sp|P0CAI0|VF602_ASFK5 Protein B602L OS=African swine fever virus (isolate
Pig/Kenya/KEN-50/1950) GN=Ken-091 PE=3 SV=1
Length = 543
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 29/41 (70%)
Query: 38 EDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSAP 78
+D +EKIK+L +++N DEK +L+ K++LE ++ ++ P
Sbjct: 476 DDCEEKIKQLLSKENLTPDEKSQLEKTKKQLENALEMLNVP 516
>sp|Q8R311|CTGE5_MOUSE Cutaneous T-cell lymphoma-associated antigen 5 homolog OS=Mus
musculus GN=Ctage5 PE=1 SV=1
Length = 779
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 35/52 (67%)
Query: 25 QLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMS 76
Q+ T+ ++ Q EDL E IK L++++ L+ EK +++ +KL+Q++K ++
Sbjct: 313 QVYTQLSEVDQVKEDLTEHIKSLESKQASLQSEKTEFESESQKLQQKLKVIT 364
>sp|Q9SN74|BH047_ARATH Transcription factor bHLH47 OS=Arabidopsis thaliana GN=BHLH47 PE=2
SV=1
Length = 240
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 37/66 (56%)
Query: 9 KTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKL 68
+ KA+IL + R ++ + + + L++ L + + EKNEL++E L+ + KL
Sbjct: 60 NSGKASILCEATRFLKDVFGQIESLRKEHASLLSESSYVTTEKNELKEETSVLETEISKL 119
Query: 69 EQQVKA 74
+ +++A
Sbjct: 120 QNEIEA 125
>sp|P04522|EXO2_BPT4 Exonuclease subunit 2 OS=Enterobacteria phage T4 GN=46 PE=4 SV=2
Length = 560
Score = 33.5 bits (75), Expect = 0.38, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 16 LSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAM 75
+S+ EQL T LK ++ ++ IK ++ N++R++KQ L A +K ++ A+
Sbjct: 309 VSECTHSFEQLSTHRDNLKVLVDEYRDNIKTQQSLANDIRNKKQSLIAAVDKAKKVKAAI 368
Query: 76 S-APSGFLPHPSSMS 89
A S F+ H ++
Sbjct: 369 EKASSEFIDHADEIA 383
>sp|Q5XI63|KIFC1_RAT Kinesin-like protein KIFC1 OS=Rattus norvegicus GN=Kifc1 PE=2 SV=1
Length = 693
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 4 PGRPPKTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKE-------LKAEKNELRD 56
PG+ P D L D+ ++Q R + Q L + + L+E+++E L E+N L +
Sbjct: 151 PGKRPAWDLKGQLCDLHEELKQYREKTQTLDRENQGLREQLREVQEQATTLGTERNTLEE 210
Query: 57 EKQRLKADKEKLEQQVKAMSA 77
E ++ E+ +Q+++ + A
Sbjct: 211 ELASVRRRAEQSQQKLETLGA 231
>sp|Q9P219|DAPLE_HUMAN Protein Daple OS=Homo sapiens GN=CCDC88C PE=1 SV=3
Length = 2028
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 23 MEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSAPSGFL 82
+E+L+T+ ++ KQS +DL+ +EL EK +L+ + + LKADK + Q+K +
Sbjct: 510 IEKLQTQLEREKQSNQDLETLSEELIREKEQLQSDMETLKADKAR---QIKDLEQEKD-- 564
Query: 83 PHPSSMSAAFAAQSQVASNKLVPFIGYPGVAMWQFMPPAAVDTSQ 127
H + + +SQV+S + + A+ Q + A SQ
Sbjct: 565 -HLNRAMWSLRERSQVSSEARMKDVEKENKALHQTVTEANGKLSQ 608
>sp|Q96YR5|RAD50_SULTO DNA double-strand break repair Rad50 ATPase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=rad50 PE=3 SV=2
Length = 879
Score = 32.7 bits (73), Expect = 0.66, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 38/58 (65%)
Query: 16 LSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVK 73
L+D ++++ Q++K+ E L++ + E+ ++K EL +K+ L+ D ++LE+Q+K
Sbjct: 644 LTDELQLLNFDPNRFQQIKREKEVLEKILGEINSKKGELLGKKEVLENDIKRLEEQIK 701
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 9 KTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKI----KELKAEKNELRDEK 58
K DKA++L D + + +L+++ QK + E+LQ++I KE K+ ++D K
Sbjct: 444 KMDKASLLGDAISYISELKSKLQKAESDKEELQKQIDVMNKEAGNAKSSVKDRK 497
>sp|A7I8B8|PAN_METB6 Proteasome-activating nucleotidase OS=Methanoregula boonei
(strain 6A8) GN=pan PE=3 SV=1
Length = 436
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 22 MMEQLRTEAQKLKQSTEDLQ----EKIKELKAEKNELRDEKQRLKADKEKLEQQ 71
+ EQLR + Q+++ +DL+ E+I L++ ELR++ ++ +ADK +E Q
Sbjct: 24 LTEQLRDQLQRIETDKQDLESQMLERISSLESRNLELREQIRQAEADKRYIETQ 77
>sp|Q96RT6|CTGE2_HUMAN Protein cTAGE-2 OS=Homo sapiens GN=CTAGE1 PE=1 SV=2
Length = 745
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 33/52 (63%)
Query: 25 QLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMS 76
Q+ + ++ ++ E+L E IK L+ E+ L+ E +++ +KL+Q++K M+
Sbjct: 305 QIYIQLSEVDKTKEELTEHIKNLQTEQASLQSENTHFESENQKLQQKLKVMT 356
>sp|O60610|DIAP1_HUMAN Protein diaphanous homolog 1 OS=Homo sapiens GN=DIAPH1 PE=1 SV=2
Length = 1272
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 27 RTEAQ-KLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSA 77
R E Q ++K+ D ++K+++L+ EK+ L EKQ++ +K+ LE +V ++
Sbjct: 495 RHELQVEMKKMESDFEQKLQDLQGEKDALHSEKQQIATEKQDLEAEVSQLTG 546
>sp|Q795Q5|YTTA_BACSU Uncharacterized membrane protein YttA OS=Bacillus subtilis (strain
168) GN=yttA PE=2 SV=2
Length = 248
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
Query: 23 MEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRD-------EKQRLKADKEKLEQQVK 73
+E+L+ E LK++ + L+ +IKEL+ + +L++ E + L+ DK KLE Q+K
Sbjct: 112 LEKLKNENSDLKKTQKSLKAEIKELQENQKQLKEDAKTAKAENETLRQDKTKLENQLK 169
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 28 TEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAM 75
+EA+KLK + ED Q+K+++LK E ++L+ ++ LKA+ ++L++ K +
Sbjct: 97 SEAKKLKDNKED-QDKLEKLKNENSDLKKTQKSLKAEIKELQENQKQL 143
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%)
Query: 17 SDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMS 76
SD+ + + L+ E ++L+++ + L+E K KAE LR +K +L+ ++ E Q +
Sbjct: 120 SDLKKTQKSLKAEIKELQENQKQLKEDAKTAKAENETLRQDKTKLENQLKETESQTASSH 179
Query: 77 APSGFLPHPSSMS 89
+G + +S S
Sbjct: 180 EDTGSSSNNTSKS 192
>sp|P47522|Y280_MYCGE Uncharacterized protein MG280 OS=Mycoplasma genitalium (strain ATCC
33530 / G-37 / NCTC 10195) GN=MG280 PE=4 SV=2
Length = 265
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 41 QEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSAPS 79
QEKI+EL A K +L + K +L K L++ A S+PS
Sbjct: 111 QEKIRELDATKKDLENSKTQLDNFKNNLDKNGTASSSPS 149
>sp|O08808|DIAP1_MOUSE Protein diaphanous homolog 1 OS=Mus musculus GN=Diaph1 PE=1 SV=1
Length = 1255
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 27 RTEAQ-KLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSA 77
R E Q ++K+ D ++K+++L+ EK+ L EKQ++ A K+ LE +V ++
Sbjct: 486 RHELQVEMKKMENDFEQKLQDLQGEKDALDSEKQQITAQKQDLEAEVSKLTG 537
>sp|Q62036|AZI1_MOUSE 5-azacytidine-induced protein 1 OS=Mus musculus GN=Azi1 PE=1 SV=2
Length = 1060
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 17 SDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKA 63
S V R+ ++ TE +L+QS LQE+ ELK E EK+RL++
Sbjct: 901 SRVKRVRDKYETELSELEQSERKLQERCSELKGRLGEAEGEKERLQS 947
>sp|O34549|YLBO_BACSU Uncharacterized protein YlbO OS=Bacillus subtilis (strain 168)
GN=ylbO PE=4 SV=1
Length = 193
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 16 LSDVVRMMEQLRT--EAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVK 73
+ DV++ +EQ + AQ+ + E L+E+I+ L+ E +LR E Q L+ E E+ K
Sbjct: 106 IQDVIQFLEQFKETPSAQEFQLEREKLKEQIQSLQKELEDLRSENQTLRNQLEMTEEDYK 165
Query: 74 AM 75
A+
Sbjct: 166 AL 167
>sp|Q99996|AKAP9_HUMAN A-kinase anchor protein 9 OS=Homo sapiens GN=AKAP9 PE=1 SV=3
Length = 3911
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 2 LEPGRPPKTDKATILSDVVRMMEQLRTE--AQKLKQSTEDLQEKIKELKAEKNELRDEKQ 59
+E R + +K T+ +V + QL+TE +++K+ DLQEK +L+AE + L+DEK+
Sbjct: 740 IEILRQEEKEKGTLEQEVQEL--QLKTELLEKQMKEKENDLQEKFAQLEAENSILKDEKK 797
Query: 60 RLK 62
L+
Sbjct: 798 TLE 800
>sp|Q70FJ1|AKAP9_MOUSE A-kinase anchor protein 9 OS=Mus musculus GN=Akap9 PE=2 SV=2
Length = 3797
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 2 LEPGRPPKTDKATILSDVVRMMEQLRTE--AQKLKQSTEDLQEKIKELKAEKNELRDEKQ 59
+E + + +K T+ +V + QL+TE ++LK+ +DLQEK +L AE N L++EK
Sbjct: 707 IEILKQEEKEKGTLEQEVQEL--QLKTEQLEKQLKEKEDDLQEKCAQLDAENNILKEEK- 763
Query: 60 RLKADKEKL 68
R+ DK K+
Sbjct: 764 RVLEDKLKM 772
>sp|Q6VGS5|DAPLE_MOUSE Protein Daple OS=Mus musculus GN=Ccdc88c PE=1 SV=1
Length = 2009
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 23 MEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSAPSGFL 82
+E+L+T+ ++ KQS +DL+ +EL EK +L+ + LKAD+ + Q+K + G L
Sbjct: 510 IEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRAR---QIKDLEQEKGHL 566
>sp|Q15025|TNIP1_HUMAN TNFAIP3-interacting protein 1 OS=Homo sapiens GN=TNIP1 PE=1 SV=2
Length = 636
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 24 EQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRL-KADKEKLEQQVKAMSAPSGFL 82
EQL EA++L+Q + LQ+++ L ++ E QRL KA +E L Q S P+ F
Sbjct: 382 EQLTAEAKELRQKVKYLQDQLSPLTRQREYQEKEIQRLNKALEEALSIQTPPSSPPTAF- 440
Query: 83 PHPSSMSAAFAAQSQVASNKLV 104
P A Q V N+L+
Sbjct: 441 GSPEGAGALLRKQELVTQNELL 462
>sp|P39453|TORS_ECOLI Sensor protein TorS OS=Escherichia coli (strain K12) GN=torS PE=1
SV=4
Length = 914
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 8 PKTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEK 67
P+T L + R+M+ R+ L + E L ++K AE EL E ++ +A+ EK
Sbjct: 380 PETAGVRELDTIGRLMDAFRSNVHALNRHREQLAAQVKARTAELQELVIEHRQARAEAEK 439
Query: 68 LEQQVKAMSAPSGFL 82
Q A S FL
Sbjct: 440 ASQ------AKSAFL 448
>sp|Q99972|MYOC_HUMAN Myocilin OS=Homo sapiens GN=MYOC PE=1 SV=2
Length = 504
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 21 RMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMS 76
R + LR E +L+ T +L+ L +K+ L +EK+RL+ + E L +++++ S
Sbjct: 119 RELGTLRRERDQLETQTRELETAYSNLLRDKSVLEEEKKRLRQENENLARRLESSS 174
>sp|Q863A3|MYOC_MACFA Myocilin OS=Macaca fascicularis GN=MYOC PE=3 SV=1
Length = 491
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 21 RMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMS 76
R + LR E +L+ T +L+ L +K+ L +EK+RL+ + E L +++++ S
Sbjct: 106 RELGTLRRERDQLETQTRELETAYSNLLRDKSVLEEEKKRLRQENENLARRLESSS 161
>sp|P58356|TORS_ECO57 Sensor protein TorS OS=Escherichia coli O157:H7 GN=torS PE=3 SV=1
Length = 914
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 8 PKTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEK 67
P+T L + R+M+ R+ L + E L ++K AE EL E ++ +A+ EK
Sbjct: 380 PETAGVRELDTIGRLMDAFRSSVHALNRHREQLAAQVKARTAELQELVIEHRQARAEAEK 439
Query: 68 LEQQVKAMSAPSGFL 82
Q A S FL
Sbjct: 440 ASQ------AKSAFL 448
>sp|Q9JKY5|HIP1R_MOUSE Huntingtin-interacting protein 1-related protein OS=Mus musculus
GN=Hip1r PE=1 SV=2
Length = 1068
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 4 PGRPPKTDKATILSDVVRMMEQLRTEAQKLKQSTE----DLQEKIKELKAEKNELRDEKQ 59
P K D+ + ++ R +E LR E +K+K + L+ ++ L+AE E R +KQ
Sbjct: 344 PNGSMKDDRDLQIENLKREVETLRAELEKIKMEAQRYISQLKGQVNGLEAELEEQRKQKQ 403
Query: 60 RLKADKEKLEQQVKAMSA 77
+ D E+L ++ + A
Sbjct: 404 KALVDNEQLRHELAQLKA 421
>sp|O93309|SMC3_XENLA Structural maintenance of chromosomes protein 3 OS=Xenopus laevis
GN=smc3 PE=1 SV=2
Length = 1209
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 14/98 (14%)
Query: 33 LKQSTEDLQEKIKELKAEKNELRDEK-----------QRLKADKEKLEQQVKAMSAPSG- 80
+K E+L +K E+K +K+EL+ E+ Q L A +E LE++ + + A +G
Sbjct: 444 VKTRVEELDKKYYEVKNKKDELQSERNYLWREENAEQQSLAAKREDLEKKQQLLRAATGK 503
Query: 81 -FLPHPSSMSAAFAAQSQVASNKLVPFIGYPGVAMWQF 117
L S++ + N+ V GY G+ M F
Sbjct: 504 AILNGIDSINKVLEHFRRKGINQHV-INGYHGIVMNNF 540
>sp|P39650|RSFA_BACSU Prespore-specific transcriptional regulator RsfA OS=Bacillus
subtilis (strain 168) GN=rsfA PE=1 SV=1
Length = 258
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 14/86 (16%)
Query: 1 MLEPGRPPKTDKATILSDVVRMMEQ----------LRTEAQKLKQSTEDLQEKIKELKAE 50
+L P P + T ++DV+R ++ L+ E ++LK+ ++LQ K ++L+AE
Sbjct: 146 LLSPQTPAAAPEMT-MNDVIRFLQNYEGNHEQSSALKMENERLKKENQELQNKTEQLEAE 204
Query: 51 KNELRDEKQRLKADKEKLEQQVKAMS 76
+L +++ ++ D E L VK M+
Sbjct: 205 VQKLEKDQKTIQEDYETL---VKIMN 227
>sp|Q9WUU8|TNIP1_MOUSE TNFAIP3-interacting protein 1 OS=Mus musculus GN=Tnip1 PE=1 SV=1
Length = 647
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 24 EQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRL-KADKEKLEQQVKAMSAPSGFL 82
EQL EA++L+Q LQ+++ L ++ E QRL KA +E L Q S P+ F
Sbjct: 395 EQLTAEAKELRQKVRYLQDQLSPLTRQREYQEKEIQRLNKALEEALSIQASPSSPPAAF- 453
Query: 83 PHPSSMSAAFAAQSQVASNKLV 104
P + Q V N+L+
Sbjct: 454 GSPEGVGGHLRKQELVTQNELL 475
>sp|Q6GLA1|MSD4_XENTR Myb/SANT-like DNA-binding domain-containing protein 4 OS=Xenopus
tropicalis GN=msantd4 PE=2 SV=1
Length = 408
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 24 EQLRTEAQKLKQSTEDLQ---EKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSAPS 79
++L EA++L+ E LQ E+++ L E L+ EK+RL+ ++EKL QV P+
Sbjct: 251 QRLSIEAERLQVEKERLQIERERLRHLDMEHERLQLEKERLQIEREKLRLQVMHAEKPN 309
>sp|Q8STL0|Y9I8_ENCCU Uncharacterized protein ECU09_1880 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=ECU09_1880 PE=1 SV=1
Length = 414
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 28 TEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVK 73
T +++K+S E+L+ LK NEL +E+ + A + KLE +V+
Sbjct: 359 TRTEEIKRSIEELERMYNVLKIRNNELLNERNKESAIRNKLEMEVE 404
>sp|O75146|HIP1R_HUMAN Huntingtin-interacting protein 1-related protein OS=Homo sapiens
GN=HIP1R PE=1 SV=2
Length = 1068
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 4 PGRPPKTDKATILSDVVRMMEQLRTEAQKLK----QSTEDLQEKIKELKAEKNELRDEKQ 59
P K D+ + + R +E LR+E +K+K + L+ ++ L+ E E R +KQ
Sbjct: 344 PNGSVKDDRDLQIESLKREVEMLRSELEKIKLEAQRYIAQLKSQVNALEGELEEQRKQKQ 403
Query: 60 RLKADKEKLEQQVKAMSA 77
+ D E+L ++ + A
Sbjct: 404 KALVDNEQLRHELAQLRA 421
>sp|Q8TXI4|RAD50_METKA DNA double-strand break repair Rad50 ATPase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=rad50 PE=3 SV=1
Length = 876
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 32/55 (58%)
Query: 16 LSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQ 70
L DV + +L E +L++ E+L+ + +L++ +N L ++ L+ K +LE+
Sbjct: 280 LGDVPSKVRELENEEAELRRRIEELRNLLDDLRSLRNRLESAEEELEGVKRELEE 334
>sp|Q96KP6|TNIP3_HUMAN TNFAIP3-interacting protein 3 OS=Homo sapiens GN=TNIP3 PE=1 SV=2
Length = 325
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 30/103 (29%)
Query: 12 KATILSDVVR------MMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKA-- 63
K + D +R E++RTE + LKQ + +E K+ ++++ L EK+ L+
Sbjct: 173 KCSFSEDCLRKSRVEFCHEEMRTEMEVLKQQVQIYEEDFKKERSDRERLNQEKEELQQIN 232
Query: 64 -------------------DKEKLEQQVKAMSAP---SGFLPH 84
+KEKLE+Q+K M P G + H
Sbjct: 233 ETSQSQLNRLNSQIKACQMEKEKLEKQLKQMYCPPCNCGLVFH 275
>sp|O70624|MYOC_MOUSE Myocilin OS=Mus musculus GN=Myoc PE=1 SV=1
Length = 490
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 26 LRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMS 76
LR E +L+ T DL+ L +K+ L +EK++L+ + E L +++++ S
Sbjct: 110 LRRERDQLETQTRDLEAAYNNLLRDKSALEEEKRQLEQENEDLARRLESSS 160
>sp|Q54GQ1|MTMR_DICDI Myotubularin-related protein DDB_G0290005 OS=Dictyostelium discoideum
GN=DDB_G0290005 PE=3 SV=2
Length = 1324
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 46 ELKAEKNELRDEKQRLKADKEKLEQQ 71
E K EK + RD+K+R + +KE LEQQ
Sbjct: 1164 ERKLEKEKKRDQKEREQKEKELLEQQ 1189
>sp|Q9CW03|SMC3_MOUSE Structural maintenance of chromosomes protein 3 OS=Mus musculus
GN=Smc3 PE=1 SV=2
Length = 1217
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 14/107 (13%)
Query: 33 LKQSTEDLQEKIKELKAEKNELRDEK-----------QRLKADKEKLEQQVKAMSAPSG- 80
+K E+L K E+K +K+EL+ E+ Q L A +E LE++ + + A +G
Sbjct: 444 VKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGK 503
Query: 81 -FLPHPSSMSAAFAAQSQVASNKLVPFIGYPGVAMWQFMPPAAVDTS 126
L S++ + N+ V GY G+ M F A T
Sbjct: 504 AILNGIDSINKVLEHFRRKGINQHVQN-GYHGIVMNNFECEPAFYTC 549
>sp|P54697|MYOJ_DICDI Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2
Length = 2245
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 35 QSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQ 70
Q TE EKIK+LK + E +DEK++L+ + E+++Q
Sbjct: 1256 QLTEQSNEKIKKLKGKLEEYQDEKKQLQQELERIKQ 1291
>sp|Q8NCY6|MSD4_HUMAN Myb/SANT-like DNA-binding domain-containing protein 4 OS=Homo
sapiens GN=MSANTD4 PE=1 SV=1
Length = 345
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 QLRTEAQKLKQSTEDLQ---EKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSAPS 79
+L EA++L+ E LQ E+++ L E L+ EK+RL+ ++EKL Q+ PS
Sbjct: 218 RLDIEAERLQVEKERLQIEKERLRHLDMEHERLQLEKERLQIEREKLRLQIVNSEKPS 275
>sp|O97594|SMC3_BOVIN Structural maintenance of chromosomes protein 3 OS=Bos taurus
GN=SMC3 PE=1 SV=1
Length = 1218
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 14/107 (13%)
Query: 33 LKQSTEDLQEKIKELKAEKNELRDEK-----------QRLKADKEKLEQQVKAMSAPSG- 80
+K E+L K E+K +K+EL+ E+ Q L A +E LE++ + + A +G
Sbjct: 444 VKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGK 503
Query: 81 -FLPHPSSMSAAFAAQSQVASNKLVPFIGYPGVAMWQFMPPAAVDTS 126
L S++ + N+ V GY G+ M F A T
Sbjct: 504 AILNGIDSINKVLDHFRRKGINQHVQN-GYHGIVMNNFECEPAFYTC 549
>sp|Q2KJB9|MSD4_BOVIN Myb/SANT-like DNA-binding domain-containing protein 4 OS=Bos taurus
GN=MSANTD4 PE=2 SV=1
Length = 345
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 QLRTEAQKLKQSTEDLQ---EKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSAPS 79
+L EA++L+ E LQ E+++ L E L+ EK+RL+ ++EKL Q+ PS
Sbjct: 218 RLDIEAERLQVEKERLQIEKERLRHLDMEHERLQLEKERLQIEREKLRLQIVNSEKPS 275
>sp|Q5R4K5|SMC3_PONAB Structural maintenance of chromosomes protein 3 OS=Pongo abelii
GN=SMC3 PE=2 SV=1
Length = 1217
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 14/107 (13%)
Query: 33 LKQSTEDLQEKIKELKAEKNELRDEK-----------QRLKADKEKLEQQVKAMSAPSG- 80
+K E+L K E+K +K+EL+ E+ Q L A +E LE++ + + A +G
Sbjct: 444 VKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGK 503
Query: 81 -FLPHPSSMSAAFAAQSQVASNKLVPFIGYPGVAMWQFMPPAAVDTS 126
L S++ + N+ V GY G+ M F A T
Sbjct: 504 AILNGIDSINKVLDHFRRKGINQHVQN-GYHGIVMNNFECEPAFYTC 549
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.126 0.347
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,702,046
Number of Sequences: 539616
Number of extensions: 1683323
Number of successful extensions: 29347
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 1003
Number of HSP's that attempted gapping in prelim test: 20439
Number of HSP's gapped (non-prelim): 9365
length of query: 136
length of database: 191,569,459
effective HSP length: 101
effective length of query: 35
effective length of database: 137,068,243
effective search space: 4797388505
effective search space used: 4797388505
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)