Query 032663
Match_columns 136
No_of_seqs 175 out of 696
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 06:31:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032663.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032663hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3drz_A BTB/POZ domain-containi 92.8 0.3 1E-05 33.7 6.1 76 58-135 5-92 (107)
2 3drx_A BTB/POZ domain-containi 88.0 1.1 3.8E-05 34.9 6.0 76 57-135 10-98 (202)
3 1s1g_A Potassium voltage-gated 87.3 0.45 1.5E-05 34.0 3.2 75 57-135 11-95 (124)
4 3kvt_A Potassium channel prote 83.4 0.38 1.3E-05 34.0 1.2 75 59-135 5-88 (115)
5 1t1d_A Protein (potassium chan 80.1 1.3 4.4E-05 30.5 2.9 73 61-135 3-85 (100)
6 2vpk_A Myoneurin; transcriptio 77.9 4.7 0.00016 26.8 5.3 53 61-119 25-82 (116)
7 2nz0_B Potassium voltage-gated 77.3 2.4 8.1E-05 30.9 3.8 75 57-135 33-117 (140)
8 2vkp_A BTB/POZ domain-containi 73.7 8.5 0.00029 25.0 5.6 57 61-119 11-73 (109)
9 3ga1_A Nucleus accumbens-assoc 72.2 7.9 0.00027 26.3 5.3 53 61-119 36-92 (129)
10 1nn7_A Potassium channel KV4.2 70.9 2.4 8.1E-05 29.1 2.3 71 61-135 2-82 (105)
11 1r29_A B-cell lymphoma 6 prote 69.5 9.8 0.00034 25.6 5.3 55 61-119 32-91 (127)
12 3b84_A Zinc finger and BTB dom 68.1 13 0.00046 24.8 5.7 53 61-119 27-82 (119)
13 2ppi_A Gigaxonin; BTB domain, 65.1 19 0.00065 25.1 6.2 57 61-119 50-111 (144)
14 2if5_A Zinc finger and BTB dom 64.2 24 0.00083 23.2 6.4 57 61-119 28-87 (120)
15 3htm_A Speckle-type POZ protei 59.1 15 0.00053 25.5 4.8 55 61-119 37-96 (172)
16 1buo_A POZ domain, protein (pr 50.5 41 0.0014 22.3 5.7 52 61-119 31-85 (121)
17 2yy9_A Zinc finger and BTB dom 50.5 19 0.00066 24.6 4.1 53 61-119 28-83 (135)
18 2z8h_A Transcription regulator 50.4 33 0.0011 23.4 5.3 55 61-119 39-97 (138)
19 2ihc_A Transcription regulator 49.7 23 0.00079 23.7 4.3 55 61-119 32-90 (124)
20 2q81_A MIZ-1 protein; BTB/POZ 48.9 44 0.0015 22.1 5.6 52 61-119 30-84 (119)
21 3ohu_A Transcription regulator 48.4 28 0.00095 23.2 4.5 55 61-119 35-93 (125)
22 4eoz_A Speckle-type POZ protei 42.0 14 0.00049 24.9 2.2 55 61-119 28-87 (145)
23 3fkc_A Transcriptional regulat 36.8 87 0.003 20.6 5.6 52 61-119 34-88 (116)
24 1j26_A Immature colon carcinom 33.3 32 0.0011 24.1 2.9 48 70-117 46-104 (112)
25 3hqi_A Speckle-type POZ protei 32.6 62 0.0021 24.9 4.8 71 61-134 177-255 (312)
26 3n5b_B ASR0485 protein; PII, P 32.2 5.7 0.00019 28.3 -1.2 32 53-92 12-43 (112)
27 2xko_C PIPX, global nitrogen r 31.7 5.1 0.00018 27.5 -1.4 16 77-92 5-20 (89)
28 3hve_A Gigaxonin; ubiquitin, c 22.7 1.8E+02 0.0062 21.5 5.8 57 61-119 34-95 (256)
29 1ytr_A Bacteriocin plantaricin 22.3 41 0.0014 17.7 1.3 12 6-17 13-24 (26)
30 1y6i_A Mg-chelatase cofactor G 21.2 9 0.00031 30.4 -2.0 30 54-85 200-229 (233)
31 3i7a_A Putative metal-dependen 20.6 68 0.0023 24.6 3.0 46 81-131 6-51 (281)
No 1
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=92.80 E-value=0.3 Score=33.66 Aligned_cols=76 Identities=18% Similarity=0.338 Sum_probs=54.2
Q ss_pred CceEEEEEcCcceEEEEeccccCC-H--HHHHHHHHhCC----CCCCCcEEEcCchHHHHHHHHHHhcCCC--C---Ccc
Q 032663 58 KELHAVYVGKSRRQYYLTSDVICH-P--LFQELIERSGG----FDDEGEVVVACEVVLFEHLLWMLESSTG--T---QLG 125 (136)
Q Consensus 58 kG~~~VyVG~e~~RfvVp~~~L~h-p--~F~~LL~~aee----f~~~G~l~iPCd~~~Fe~ll~~l~~~~~--~---~~~ 125 (136)
...+.+-||. ++|.+..+-|.. | .|..|...... .+.+|.+.|..|...|++||..++.+.= + ...
T Consensus 5 ~~~v~LNVGG--~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fiDRdp~~F~~IL~~lr~g~l~~p~~~~~~ 82 (107)
T 3drz_A 5 SKWVRLNVGG--TYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEE 82 (107)
T ss_dssp CCEEEEEETT--EEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEECSCHHHHHHHHHHHHHSCCCCCTTSCHH
T ss_pred CCEEEEEECC--EEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEecCChHHHHHHHHHhCCCeeCCCCCCCHH
Confidence 4577888994 899999887753 3 46666432212 3467899999999999999999988731 1 124
Q ss_pred CHHHHHhhcc
Q 032663 126 SMQELVDFYT 135 (136)
Q Consensus 126 sl~el~~fy~ 135 (136)
.+.+-++||.
T Consensus 83 ~l~~Ea~fy~ 92 (107)
T 3drz_A 83 GVLEEAEFYN 92 (107)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHCC
Confidence 4667778874
No 2
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=87.98 E-value=1.1 Score=34.90 Aligned_cols=76 Identities=18% Similarity=0.368 Sum_probs=54.7
Q ss_pred CCceEEEEEcCcceEEEEeccccCC-H--HHHHHHHHhCCC----CCCCcEEEcCchHHHHHHHHHHhcCCCC------C
Q 032663 57 AKELHAVYVGKSRRQYYLTSDVICH-P--LFQELIERSGGF----DDEGEVVVACEVVLFEHLLWMLESSTGT------Q 123 (136)
Q Consensus 57 pkG~~~VyVG~e~~RfvVp~~~L~h-p--~F~~LL~~aeef----~~~G~l~iPCd~~~Fe~ll~~l~~~~~~------~ 123 (136)
....+.+-||. +||.+..+-|.. | .|..|......+ +.+|.+.|..|...|++||..++.+ .- .
T Consensus 10 ~~~~V~LNVGG--~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFIDRDP~~F~~ILnyLRtG-~L~lP~~~~ 86 (202)
T 3drx_A 10 VSKWVRLNVGG--TYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHG-KLVINKDLA 86 (202)
T ss_dssp CCCEEEEEETT--EEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEECSCSTTHHHHHHHHHHS-CCCCCTTSC
T ss_pred CCCEEEEEECC--EEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEecCChHHHHHHHHHhcCC-ccCCCCCCC
Confidence 34578889994 899999888754 4 556664322223 3679999999999999999999987 32 1
Q ss_pred ccCHHHHHhhcc
Q 032663 124 LGSMQELVDFYT 135 (136)
Q Consensus 124 ~~sl~el~~fy~ 135 (136)
...+.+-++||.
T Consensus 87 ~~~l~eEA~Fyg 98 (202)
T 3drx_A 87 EEGVLEEAEFYN 98 (202)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHCC
Confidence 244667778884
No 3
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=87.31 E-value=0.45 Score=34.05 Aligned_cols=75 Identities=17% Similarity=0.280 Sum_probs=52.2
Q ss_pred CCceEEEEEcCcceEEEEeccccCC-HHHHHHHHHhCC---C-CCCCcEEEcCchHHHHHHHHHHhcCCC--C---CccC
Q 032663 57 AKELHAVYVGKSRRQYYLTSDVICH-PLFQELIERSGG---F-DDEGEVVVACEVVLFEHLLWMLESSTG--T---QLGS 126 (136)
Q Consensus 57 pkG~~~VyVG~e~~RfvVp~~~L~h-p~F~~LL~~aee---f-~~~G~l~iPCd~~~Fe~ll~~l~~~~~--~---~~~s 126 (136)
+...+.+-||. ++|.+..+-|.. |- .+|..++. + +.+|.+.|..|...|++||..++.+.= + ....
T Consensus 11 ~~~~V~LNVGG--~~F~t~~~TL~~~p~--S~L~~~~~~~~~~~~~g~~FiDRdp~~F~~ILnflR~G~l~~p~~~~~~~ 86 (124)
T 1s1g_A 11 QDELIVLNVSG--RRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYPRYECISA 86 (124)
T ss_dssp -CCEEEEEETT--EEEEEEHHHHTTSTT--SSTTSSGGGGTBCSSSCSEEECSCHHHHHHHHHHHHHSCBCCCTTSCHHH
T ss_pred CCCEEEEEeCC--EEEEEeHHHHhcCCC--ceecccCCcccccCCCCcEEEcCChHHHHHHHHHHhcCCCCCCCCcCHHH
Confidence 45678888994 899998876642 21 12333331 3 367999999999999999999998730 1 2345
Q ss_pred HHHHHhhcc
Q 032663 127 MQELVDFYT 135 (136)
Q Consensus 127 l~el~~fy~ 135 (136)
+.|-++||.
T Consensus 87 l~~Ea~fy~ 95 (124)
T 1s1g_A 87 YDDELAFYG 95 (124)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 777788884
No 4
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=83.45 E-value=0.38 Score=33.97 Aligned_cols=75 Identities=13% Similarity=0.090 Sum_probs=49.8
Q ss_pred ceEEEEEcCcceEEEEeccccCC-H--HHHHHHHHhCCC-CCCCcEEEcCchHHHHHHHHHHhcCCC--C---CccCHHH
Q 032663 59 ELHAVYVGKSRRQYYLTSDVICH-P--LFQELIERSGGF-DDEGEVVVACEVVLFEHLLWMLESSTG--T---QLGSMQE 129 (136)
Q Consensus 59 G~~~VyVG~e~~RfvVp~~~L~h-p--~F~~LL~~aeef-~~~G~l~iPCd~~~Fe~ll~~l~~~~~--~---~~~sl~e 129 (136)
..+.+-||. +||....+-|.. | .+..|......+ +..|.+.|.-|...|++||..++.+.= | ....+.|
T Consensus 5 ~~V~LNVGG--~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiDRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~ 82 (115)
T 3kvt_A 5 NRVIINVGG--IRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFDRHPGVFAQIINYYRSGKLHYPTDVCGPLFEE 82 (115)
T ss_dssp CEEEEEETT--EEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEECSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHH
T ss_pred CEEEEEECC--EEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEecChHHHHHHHHHhcCCCCCCCCcccHHHHHH
Confidence 467888994 899998766542 2 122222111112 267899999999999999999988730 1 2345777
Q ss_pred HHhhcc
Q 032663 130 LVDFYT 135 (136)
Q Consensus 130 l~~fy~ 135 (136)
-++||.
T Consensus 83 Ea~fy~ 88 (115)
T 3kvt_A 83 ELEFWG 88 (115)
T ss_dssp HHHHHT
T ss_pred HHHHhC
Confidence 788884
No 5
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=80.11 E-value=1.3 Score=30.47 Aligned_cols=73 Identities=18% Similarity=0.289 Sum_probs=48.1
Q ss_pred EEEEEcCcceEEEEecccc-CCH--HHHHHHHHhCCCC-CCCcEEEcCchHHHHHHHHHHhc-CC--CC---CccCHHHH
Q 032663 61 HAVYVGKSRRQYYLTSDVI-CHP--LFQELIERSGGFD-DEGEVVVACEVVLFEHLLWMLES-ST--GT---QLGSMQEL 130 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L-~hp--~F~~LL~~aeef~-~~G~l~iPCd~~~Fe~ll~~l~~-~~--~~---~~~sl~el 130 (136)
+.+-||. +||....+-| ++| .+..+......++ ..|.+.|.-|...|++||..++. +. -| ....+.+-
T Consensus 3 v~LNVGG--~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFiDRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~E 80 (100)
T 1t1d_A 3 VVINVSG--LRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFDRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEE 80 (100)
T ss_dssp EEEEETT--EEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEECSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHH
T ss_pred EEEEECC--EEEEeeHHHHhcCCCccccchhccccccCCCceeEEEcCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHH
Confidence 5566884 8898887655 222 2233333322343 67899999999999999999998 42 12 23446777
Q ss_pred Hhhcc
Q 032663 131 VDFYT 135 (136)
Q Consensus 131 ~~fy~ 135 (136)
++||.
T Consensus 81 a~fy~ 85 (100)
T 1t1d_A 81 IKFYE 85 (100)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 88874
No 6
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=77.95 E-value=4.7 Score=26.80 Aligned_cols=53 Identities=17% Similarity=0.320 Sum_probs=41.6
Q ss_pred EEEEEcCcceEEEEecccc--CCHHHHHHHHHhCCCCCCCcEEEc---CchHHHHHHHHHHhcC
Q 032663 61 HAVYVGKSRRQYYLTSDVI--CHPLFQELIERSGGFDDEGEVVVA---CEVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L--~hp~F~~LL~~aeef~~~G~l~iP---Cd~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ ++|-+.-..| ..|.|+.++... .+..|.|+ .+...|+.++..+-.+
T Consensus 25 v~l~v~~--~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~Yt~ 82 (116)
T 2vpk_A 25 CTIVIGE--FQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFIYTG 82 (116)
T ss_dssp EEEEETT--EEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHHHHS
T ss_pred EEEEECC--EEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHHcCC
Confidence 3456664 6888888887 579999988654 35678887 7999999999999877
No 7
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=77.33 E-value=2.4 Score=30.87 Aligned_cols=75 Identities=17% Similarity=0.269 Sum_probs=52.1
Q ss_pred CCceEEEEEcCcceEEEEeccccC-CHHHHHHHHHhCC---C-CCCCcEEEcCchHHHHHHHHHHhcCC-----CCCccC
Q 032663 57 AKELHAVYVGKSRRQYYLTSDVIC-HPLFQELIERSGG---F-DDEGEVVVACEVVLFEHLLWMLESST-----GTQLGS 126 (136)
Q Consensus 57 pkG~~~VyVG~e~~RfvVp~~~L~-hp~F~~LL~~aee---f-~~~G~l~iPCd~~~Fe~ll~~l~~~~-----~~~~~s 126 (136)
....+.+-||. +||.+..+-|. +|- .+|..++. + +.+|.+.|..|...|++||..++.+. +.....
T Consensus 33 ~~~~V~LNVGG--~~F~T~~~TL~~~P~--S~L~~~~~~~~~~~~~g~yFiDRdp~~F~~ILnflR~G~l~~p~~~~~~~ 108 (140)
T 2nz0_B 33 QDELIVLNVSG--RRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYPRYECISA 108 (140)
T ss_dssp CCCEEEEEETT--EEEEEEHHHHHTCTT--STTTSGGGGGSEETTTTEEEECSCHHHHHHHHHHHHHSSBCCCTTSCHHH
T ss_pred CCCEEEEEECC--EEEEeeHHHHhcCCC--eeecccCCcccccCCCCeEEEeCCcHHHHHHHHHHhcCCcCCCCCcCHHH
Confidence 45678888995 89999876653 231 12322331 2 36799999999999999999999873 112344
Q ss_pred HHHHHhhcc
Q 032663 127 MQELVDFYT 135 (136)
Q Consensus 127 l~el~~fy~ 135 (136)
+.|-++||.
T Consensus 109 l~eEa~fy~ 117 (140)
T 2nz0_B 109 YDDELAFYG 117 (140)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 777788884
No 8
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=73.71 E-value=8.5 Score=24.99 Aligned_cols=57 Identities=19% Similarity=0.196 Sum_probs=41.7
Q ss_pred EEEEEcC--cceEEEEecccc--CCHHHHHHHHHhCCCC-CCCcEEEc-CchHHHHHHHHHHhcC
Q 032663 61 HAVYVGK--SRRQYYLTSDVI--CHPLFQELIERSGGFD-DEGEVVVA-CEVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~--e~~RfvVp~~~L--~hp~F~~LL~~aeef~-~~G~l~iP-Cd~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ +.++|-+.-..| ..|.|+.++... +. ....|.+| .+...|+.++..+-.+
T Consensus 11 v~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~--~~e~~~~i~l~~~~~~~f~~~l~~iYt~ 73 (109)
T 2vkp_A 11 VHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGD--LAEVKSEIHIPDVEPAAFLILLKYMYSD 73 (109)
T ss_dssp EEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC--------CCEEEETTSCHHHHHHHHHHHHHC
T ss_pred EEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCC--cccCCCeEEeCCCCHHHHHHHHHHHcCC
Confidence 3455665 358999998888 589999998643 22 11678897 6899999999999877
No 9
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=72.17 E-value=7.9 Score=26.29 Aligned_cols=53 Identities=17% Similarity=0.263 Sum_probs=42.1
Q ss_pred EEEEEcCcceEEEEeccccC--CHHHHHHHHHhCCCCCCCcEEEc--CchHHHHHHHHHHhcC
Q 032663 61 HAVYVGKSRRQYYLTSDVIC--HPLFQELIERSGGFDDEGEVVVA--CEVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L~--hp~F~~LL~~aeef~~~G~l~iP--Cd~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ ++|-+.-..|. .|.|+.++... ....|.|| .+...|+.++..+-.+
T Consensus 36 v~l~v~~--~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~~~~f~~ll~~iYtg 92 (129)
T 3ga1_A 36 VSVVVKG--HAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQPQSFQQILSFCYTG 92 (129)
T ss_dssp EEEEETT--EEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCCHHHHHHHHHHHHHS
T ss_pred eEEEECC--EEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCCHHHHHHHHHHHhCC
Confidence 4566664 78888877775 68999998876 45679996 8999999999998776
No 10
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=70.86 E-value=2.4 Score=29.14 Aligned_cols=71 Identities=14% Similarity=0.238 Sum_probs=46.0
Q ss_pred EEEEEcCcceEEEEeccccC-CHHHHHHHHHhCC---C-CCCCcEEEcCchHHHHHHHHHHhcCCC--C---CccCHHHH
Q 032663 61 HAVYVGKSRRQYYLTSDVIC-HPLFQELIERSGG---F-DDEGEVVVACEVVLFEHLLWMLESSTG--T---QLGSMQEL 130 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L~-hp~F~~LL~~aee---f-~~~G~l~iPCd~~~Fe~ll~~l~~~~~--~---~~~sl~el 130 (136)
+.+-||. ++|.+..+-|. +|- .+|..++. + +.+|.+.|..|...|++||..++.+.= | ....+.|-
T Consensus 2 V~LNVGG--~~f~t~~~TL~~~p~--s~L~~~~~~~~~~~~~~~~FiDRdp~~F~~ILnflR~g~l~~p~~~~~~~l~~E 77 (105)
T 1nn7_A 2 IVLNVSG--TRFQTWQDTLERYPD--TLLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYRTGKLHYPRHECISAYDEE 77 (105)
T ss_dssp EEEEETT--EEEEECHHHHHTSCS--SSTTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHH
T ss_pred EEEEECC--EEEEEeHHHHhcCCC--ccccccCCcccccCCCCcEEEeCCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHH
Confidence 4556774 78888766552 221 11222221 2 257899999999999999999998730 1 23447777
Q ss_pred Hhhcc
Q 032663 131 VDFYT 135 (136)
Q Consensus 131 ~~fy~ 135 (136)
++||.
T Consensus 78 a~fy~ 82 (105)
T 1nn7_A 78 LAFFG 82 (105)
T ss_dssp HHHHT
T ss_pred HHHcC
Confidence 78884
No 11
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=69.49 E-value=9.8 Score=25.59 Aligned_cols=55 Identities=18% Similarity=0.254 Sum_probs=42.3
Q ss_pred EEEEEcCcceEEEEecccc--CCHHHHHHHHHhC-CCCCCCcEEE-c-CchHHHHHHHHHHhcC
Q 032663 61 HAVYVGKSRRQYYLTSDVI--CHPLFQELIERSG-GFDDEGEVVV-A-CEVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L--~hp~F~~LL~~ae-ef~~~G~l~i-P-Cd~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ ++|-+.-..| ..|.|+.++.... | ....|.| + .+...|+.++..+-.+
T Consensus 32 v~l~v~~--~~~~aHk~iLaa~S~~F~~~f~~~~~e--~~~~i~l~~~~~~~~f~~ll~~~Ytg 91 (127)
T 1r29_A 32 VVIVVSR--EQFRAHKTVLMACSGLFYSIFTDQLKR--NLSVINLDPEINPEGFNILLDFMYTS 91 (127)
T ss_dssp EEEEETT--EEEEECHHHHHHHCHHHHHHHTSTTTT--TCSEEECCTTSCHHHHHHHHHHHHHS
T ss_pred EEEEECC--EEEehHHHHHHHhCHHHHHHhcCCccC--CCCEEEeCCCCCHHHHHHHHHHHcCC
Confidence 3456664 6888888888 6899999986432 2 5678999 4 6899999999999776
No 12
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=68.07 E-value=13 Score=24.77 Aligned_cols=53 Identities=25% Similarity=0.340 Sum_probs=40.5
Q ss_pred EEEEEcCcceEEEEecccc--CCHHHHHHHHHhCCCCCCCcEEEc-CchHHHHHHHHHHhcC
Q 032663 61 HAVYVGKSRRQYYLTSDVI--CHPLFQELIERSGGFDDEGEVVVA-CEVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L--~hp~F~~LL~~aeef~~~G~l~iP-Cd~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ ++|-+.-..| ..|.|+.++.... .+.|.|| .+...|+.++..+-.+
T Consensus 27 v~l~v~~--~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~~iYtg 82 (119)
T 3b84_A 27 ATLDVGG--LVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLDFFYTG 82 (119)
T ss_dssp EEEEETT--EEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHHHHHHS
T ss_pred eEEEECC--EEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHHHHcCC
Confidence 3455664 7888887777 4789998886432 5679998 5788999999999877
No 13
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=65.10 E-value=19 Score=25.08 Aligned_cols=57 Identities=7% Similarity=0.146 Sum_probs=42.4
Q ss_pred EEEEEcCcceEEEEeccccC--CHHHHHHHHHhCCC--CCCCcEEEc-CchHHHHHHHHHHhcC
Q 032663 61 HAVYVGKSRRQYYLTSDVIC--HPLFQELIERSGGF--DDEGEVVVA-CEVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L~--hp~F~~LL~~aeef--~~~G~l~iP-Cd~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ ++|-+.-..|. .|.|+.++.....- .....|.|+ .+...|+.+|..+-.+
T Consensus 50 v~l~v~~--~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg 111 (144)
T 2ppi_A 50 AHLVLDG--EEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSG 111 (144)
T ss_dssp EEEEETT--EEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTTS
T ss_pred eEEEECC--EEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhCC
Confidence 3455664 78888888885 89999999754321 245678887 4899999999999876
No 14
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=64.22 E-value=24 Score=23.22 Aligned_cols=57 Identities=12% Similarity=0.201 Sum_probs=40.8
Q ss_pred EEEEEcCcceEEEEeccccC--CHHHHHHHHHhCCCCCCCcEEEc-CchHHHHHHHHHHhcC
Q 032663 61 HAVYVGKSRRQYYLTSDVIC--HPLFQELIERSGGFDDEGEVVVA-CEVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L~--hp~F~~LL~~aeef~~~G~l~iP-Cd~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ ++|-+.-..|. .|.|+.++.....=.....|.++ .+...|+.++..+-.+
T Consensus 28 v~l~v~~--~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~ 87 (120)
T 2if5_A 28 VVILVEG--REFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTA 87 (120)
T ss_dssp EEEEETT--EEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHS
T ss_pred eEEEECC--EEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCC
Confidence 3455664 78888888884 79999998632211234578888 6899999999999877
No 15
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=59.12 E-value=15 Score=25.54 Aligned_cols=55 Identities=13% Similarity=0.402 Sum_probs=42.4
Q ss_pred EEEEEcCcceEEEEecccc--CCHHHHHHHHHhCCCC--CCCcEEEc-CchHHHHHHHHHHhcC
Q 032663 61 HAVYVGKSRRQYYLTSDVI--CHPLFQELIERSGGFD--DEGEVVVA-CEVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L--~hp~F~~LL~~aeef~--~~G~l~iP-Cd~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ ++|-+.-..| ..|.|+.++... +. ....|.|| .+...|+.++..+-.+
T Consensus 37 v~l~v~~--~~~~~Hk~iL~~~S~~F~~~f~~~--~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~ 96 (172)
T 3htm_A 37 CCLCVAG--QEFQAHKAILAARSPVFSAMFEHE--MEESKKNRVEINDVEPEVFKEMMCFIYTG 96 (172)
T ss_dssp EEEEETT--EEEEECHHHHHHHCHHHHHHHHSC--CCGGGTTEEEECSSCHHHHHHHHHHHHHS
T ss_pred eEEEECC--EEEEeeHHHHHHcCHHHHHHHccC--ccccCCCeEEecCCCHHHHHHHHHHHhCC
Confidence 5666764 6899988888 469999999832 32 34678887 6899999999999877
No 16
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=50.48 E-value=41 Score=22.27 Aligned_cols=52 Identities=13% Similarity=0.257 Sum_probs=39.4
Q ss_pred EEEEEcCcceEEEEecccc--CCHHHHHHHHHhCCCCCCCcEEEc-CchHHHHHHHHHHhcC
Q 032663 61 HAVYVGKSRRQYYLTSDVI--CHPLFQELIERSGGFDDEGEVVVA-CEVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L--~hp~F~~LL~~aeef~~~G~l~iP-Cd~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ ++|-+.-..| ..|.|+.++.. +...|.|+ .+...|+.++..+-.+
T Consensus 31 v~l~v~~--~~f~aHk~vLaa~S~yF~~~f~~-----~~~~i~l~~~~~~~f~~ll~~~Ytg 85 (121)
T 1buo_A 31 VVIMVDS--QEFHAHRTVLACTSKMFEILFHR-----NSQHYTLDFLSPKTFQQILEYAYTA 85 (121)
T ss_dssp EEEEESS--CEEEECHHHHHHHCHHHHHHTTS-----CCSEEEECSSCHHHHHHHHHHHHHS
T ss_pred EEEEECC--EEEehhHHHHhhcCHHHHHHHcC-----CCcEEEeCCCCHHHHHHHHHhhcCC
Confidence 3455664 6788887776 57888888753 24578887 7899999999999877
No 17
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=50.46 E-value=19 Score=24.63 Aligned_cols=53 Identities=21% Similarity=0.249 Sum_probs=37.2
Q ss_pred EEEEEcCcceEEEEeccccC--CHHHHHHHHHhCCCCCCCcEEEc-CchHHHHHHHHHHhcC
Q 032663 61 HAVYVGKSRRQYYLTSDVIC--HPLFQELIERSGGFDDEGEVVVA-CEVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L~--hp~F~~LL~~aeef~~~G~l~iP-Cd~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ ++|-+.-..|. .|.|+.++... + ...|.|| .+...|+.+|..+-.+
T Consensus 28 v~l~v~~--~~f~aHk~vLaa~S~yF~~mf~~~--~--~~~i~l~~~~~~~f~~lL~fiYtg 83 (135)
T 2yy9_A 28 ATLDVGG--LVFKAHWSVLACCSHFFQRIYGDG--T--GGSVVLPAGFAEIFGLLLDFFYTG 83 (135)
T ss_dssp EEEEETT--EEEEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHHHHHS
T ss_pred eEEEECC--EEEehHHHHHHHhCHHHHHHHcCC--C--CCeEEeCCCCHHHHHHHHHHHhCC
Confidence 3455664 78888777664 67888776542 2 4678887 5788999999999877
No 18
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=50.44 E-value=33 Score=23.37 Aligned_cols=55 Identities=24% Similarity=0.309 Sum_probs=41.1
Q ss_pred EEEEEcCcceEEEEecccc--CCHHHHHHHHHhCCCCCCCcEEEc--CchHHHHHHHHHHhcC
Q 032663 61 HAVYVGKSRRQYYLTSDVI--CHPLFQELIERSGGFDDEGEVVVA--CEVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L--~hp~F~~LL~~aeef~~~G~l~iP--Cd~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ ++|-+.-..| ..|.|+.++.. ++.....|.+| .+...|+.+|..+-.+
T Consensus 39 v~l~v~~--~~f~aHk~vLaa~S~yF~~~f~~--~~~e~~~i~l~~~v~~~~~~~lL~~~Ytg 97 (138)
T 2z8h_A 39 VTVLVEG--QRFRAHRSVLAACSSYFHSRIVG--QTDAELTVTLPEEVTVKGFEPLIQFAYTA 97 (138)
T ss_dssp EEEEETT--EEEEECHHHHHHHCHHHHHHHTT--CCCTTEEEECCTTSCHHHHHHHHHHHHHS
T ss_pred eEEEECC--EEEechHHHHHHcCHHHHHHHhc--CCCCCceEEeCCCCCHHHHHHHHHHhcCC
Confidence 4556664 7888888887 57999998853 23334568885 7889999999998777
No 19
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=49.68 E-value=23 Score=23.72 Aligned_cols=55 Identities=20% Similarity=0.344 Sum_probs=39.3
Q ss_pred EEEEEcCcceEEEEecccc--CCHHHHHHHHHhCCCCCCCcEEEc--CchHHHHHHHHHHhcC
Q 032663 61 HAVYVGKSRRQYYLTSDVI--CHPLFQELIERSGGFDDEGEVVVA--CEVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L--~hp~F~~LL~~aeef~~~G~l~iP--Cd~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ ++|-+.-..| ..|.|+.++.. ++.....|.+| .+...|+.++..+-.+
T Consensus 32 v~l~v~~--~~~~aHk~vLaa~S~yF~~mf~~--~~~e~~~i~l~~~v~~~~f~~lL~~iYtg 90 (124)
T 2ihc_A 32 VTIFVEG--QRFRAHRSVLAACSSYFHSRIVG--QADGELNITLPEEVTVKGFEPLIQFAYTA 90 (124)
T ss_dssp EEEEETT--EEEEECHHHHHHHBHHHHHHHTT--C---CEEEECCTTSCHHHHHHHHHHHHHS
T ss_pred EEEEECC--EEEecHHHHHHHcCHHHHHHHcC--CCCCCceEeecCCcCHHHHHHHHHHhcCC
Confidence 3455664 7888887777 47899998853 23334568884 7889999999998776
No 20
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=48.90 E-value=44 Score=22.12 Aligned_cols=52 Identities=12% Similarity=0.153 Sum_probs=39.8
Q ss_pred EEEEEcCcceEEEEeccccC--CHHHHHHHHHhCCCCCCCcEEEcC-chHHHHHHHHHHhcC
Q 032663 61 HAVYVGKSRRQYYLTSDVIC--HPLFQELIERSGGFDDEGEVVVAC-EVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L~--hp~F~~LL~~aeef~~~G~l~iPC-d~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ ++|-+.-..|. .|.|+.++.. +...|.++- +...|+.++..+-.+
T Consensus 30 v~l~v~~--~~~~aHk~vLaa~S~yF~~~f~~-----~~~~i~l~~~~~~~f~~ll~~~Ytg 84 (119)
T 2q81_A 30 CTFVVDG--VHFKAHKAVLAACSEYFKMLFVD-----QKDVVHLDISNAAGLGQVLEFMYTA 84 (119)
T ss_dssp EEEEETT--EEEEECHHHHHHHCHHHHHHHHH-----CCSGGGGGGCCHHHHHHHHHHHHHS
T ss_pred eEEEECC--EEEehhHHHHHHcCHHHHHHHcC-----CCCEEEeCCCCHHHHHHHHHHHcCC
Confidence 3455664 78888888884 7999999986 234567765 788999999999877
No 21
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=48.38 E-value=28 Score=23.16 Aligned_cols=55 Identities=13% Similarity=0.167 Sum_probs=40.9
Q ss_pred EEEEEcCcceEEEEeccccC--CHHHHHHHHHhCCCCCCCcEEEc--CchHHHHHHHHHHhcC
Q 032663 61 HAVYVGKSRRQYYLTSDVIC--HPLFQELIERSGGFDDEGEVVVA--CEVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L~--hp~F~~LL~~aeef~~~G~l~iP--Cd~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ ++|-+.-..|. .|.|+.++... +.....|.+| .+...|+.++..+-.+
T Consensus 35 v~l~v~~--~~f~aHk~vLaa~S~yF~~~f~~~--~~e~~~i~l~~~~~~~~f~~~l~~iYtg 93 (125)
T 3ohu_A 35 VTLIVER--KEFRAHRAVLAACSEYFWQALVGQ--TKNDLVVSLPEEVTARGFGPLLQFAYTA 93 (125)
T ss_dssp EEEEETT--EEEEECHHHHHHHBHHHHHHHTTC--CCSSCEEECCTTCCHHHHHHHHHHHTTS
T ss_pred eEEEECC--EEEechHHHHHHcCHHHHHHhcCC--CCCCcEEEeCCCCCHHHHHHHHHhHcCC
Confidence 4556764 68888877775 58899988543 3335678886 7999999999998766
No 22
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=41.95 E-value=14 Score=24.92 Aligned_cols=55 Identities=13% Similarity=0.402 Sum_probs=40.7
Q ss_pred EEEEEcCcceEEEEecccc--CCHHHHHHHHHhCCCC--CCCcEEEc-CchHHHHHHHHHHhcC
Q 032663 61 HAVYVGKSRRQYYLTSDVI--CHPLFQELIERSGGFD--DEGEVVVA-CEVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L--~hp~F~~LL~~aeef~--~~G~l~iP-Cd~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ ++|-+.-..| ..|.|+.++... +. ..+.|.+| .+...|+.++..+-.+
T Consensus 28 v~l~v~~--~~~~~Hk~iL~~~S~~F~~~f~~~--~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~ 87 (145)
T 4eoz_A 28 CCLCVAG--QEFQAHKAILAARSPVFSAMFEHE--MEESKKNRVEINDVEPEVFKEMMCFIYTG 87 (145)
T ss_dssp EEEEETT--EEEEECHHHHHHHCHHHHHHHHSS--SHHHHHTEEEECSSCHHHHHHHHHHHHHS
T ss_pred eEEEECC--EEEEeehHHHHHcCHHHHHHHcCC--CcCCCCceEEecCCCHHHHHHHHHhhccC
Confidence 4566764 6788887777 469999998642 21 23578886 6899999999999777
No 23
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=36.80 E-value=87 Score=20.61 Aligned_cols=52 Identities=19% Similarity=0.326 Sum_probs=38.0
Q ss_pred EEEEEcCcceEEEEecccc--CCHHHHHHHHHhCCCCCCCcEEEc-CchHHHHHHHHHHhcC
Q 032663 61 HAVYVGKSRRQYYLTSDVI--CHPLFQELIERSGGFDDEGEVVVA-CEVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L--~hp~F~~LL~~aeef~~~G~l~iP-Cd~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ ++|-+.-..| ..|.|+.++... ...|.++ .+...|+.++..+-.+
T Consensus 34 v~l~v~~--~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~~~~f~~~l~~~Ytg 88 (116)
T 3fkc_A 34 VTVIVED--RKFRAHKNILSASSTYFHQLFSVA-----GQVVELSFIRAEIFAEILNYIYSS 88 (116)
T ss_dssp EEEEETT--EEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHTTS
T ss_pred EEEEECC--EEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHhhcCC
Confidence 3555664 6787776666 357788776542 4578886 7999999999999877
No 24
>1j26_A Immature colon carcinoma transcript 1; peptide chain release factors, RF-1, the GGQ motif, immature carcinoma transcript 1; NMR {Mus musculus} SCOP: d.50.4.1
Probab=33.26 E-value=32 Score=24.10 Aligned_cols=48 Identities=23% Similarity=0.338 Sum_probs=36.1
Q ss_pred eEEEEec-cccCCHHHHHHHHHhCC-CCCCCcEEEcCch---------HHHHHHHHHHh
Q 032663 70 RQYYLTS-DVICHPLFQELIERSGG-FDDEGEVVVACEV---------VLFEHLLWMLE 117 (136)
Q Consensus 70 ~RfvVp~-~~L~hp~F~~LL~~aee-f~~~G~l~iPCd~---------~~Fe~ll~~l~ 117 (136)
=||-||. ..|....-..|++.+.. ...+|.|+|-|+. ..++.|..+|.
T Consensus 46 Lrf~i~t~~~Lp~~~k~rl~~~~~~ri~~~G~ivv~~q~~RSQ~~Nr~~Al~rL~~~l~ 104 (112)
T 1j26_A 46 VRFHLASADWIEEPVRQKIALTHKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIA 104 (112)
T ss_dssp EEEEGGGCTTSCHHHHHHHHHHTTTTBCSSSEEEEEECCCSSHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccccCCHHHHHHHHHhhccccccCCeEEEEECCccCHHHHHHHHHHHHHHHHH
Confidence 4688998 48888888888888775 5789999999984 45555555554
No 25
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=32.62 E-value=62 Score=24.88 Aligned_cols=71 Identities=13% Similarity=0.293 Sum_probs=46.7
Q ss_pred EEEEEcCcceEEEEecccc--CCHHHHHHHHHhCCCCCCCcEEEc-CchHHHHHHHHHHhcCCCCC-----ccCHHHHHh
Q 032663 61 HAVYVGKSRRQYYLTSDVI--CHPLFQELIERSGGFDDEGEVVVA-CEVVLFEHLLWMLESSTGTQ-----LGSMQELVD 132 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L--~hp~F~~LL~~aeef~~~G~l~iP-Cd~~~Fe~ll~~l~~~~~~~-----~~sl~el~~ 132 (136)
+.+.||+ +.|-+.-.+| ..|.|+.++...-.=.....|.|+ .+...|+.+|..|-.+ ... ...|-++++
T Consensus 177 v~l~v~~--~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~-~~~~~~~~~~~ll~~A~ 253 (312)
T 3hqi_A 177 CCLCVAG--QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTG-KAPNLDKMADDLLAAAD 253 (312)
T ss_dssp EEEEETT--EEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHS-CCTTHHHHHHHHHHHHH
T ss_pred eEEEECC--EEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCC-CCCChHHHHHHHHHHHH
Confidence 4566664 6788888887 469999998532110134678887 6999999999999877 322 233445555
Q ss_pred hc
Q 032663 133 FY 134 (136)
Q Consensus 133 fy 134 (136)
.|
T Consensus 254 ~~ 255 (312)
T 3hqi_A 254 KY 255 (312)
T ss_dssp HT
T ss_pred Hh
Confidence 55
No 26
>3n5b_B ASR0485 protein; PII, PIPX, transcription regulator, signal transducer; HET: ADP; 1.90A {Nostoc}
Probab=32.24 E-value=5.7 Score=28.33 Aligned_cols=32 Identities=16% Similarity=0.116 Sum_probs=13.3
Q ss_pred CCCCCCceEEEEEcCcceEEEEeccccCCHHHHHHHHHhC
Q 032663 53 NNVNAKELHAVYVGKSRRQYYLTSDVICHPLFQELIERSG 92 (136)
Q Consensus 53 ~~~vpkG~~~VyVG~e~~RfvVp~~~L~hp~F~~LL~~ae 92 (136)
+.-||+|...-=...| .|||||.|.-|..-+-
T Consensus 12 ~~~~~~~~~~~~ms~E--------~YLNHPTFGLLyrVc~ 43 (112)
T 3n5b_B 12 SGLVPRGSHMNPENSE--------TYINHPTWGLLYRICM 43 (112)
T ss_dssp --------------CC--------CEEEETTTEEEEEEEE
T ss_pred CCcccCCccCCCcchh--------hhccCCccchheeeee
Confidence 3457887654433333 3999999998876554
No 27
>2xko_C PIPX, global nitrogen regulator; transcription, nitrogen assimilation, CRP/FNR superfamily, 2-oxoglutarate, global nitrogen controller; HET: AKG; 2.25A {Synechococcus elongatus} PDB: 2xg8_D*
Probab=31.67 E-value=5.1 Score=27.53 Aligned_cols=16 Identities=25% Similarity=0.432 Sum_probs=12.6
Q ss_pred cccCCHHHHHHHHHhC
Q 032663 77 DVICHPLFQELIERSG 92 (136)
Q Consensus 77 ~~L~hp~F~~LL~~ae 92 (136)
.|||||.|.-|-.-+-
T Consensus 5 ~YLNHPtFGlLy~Vc~ 20 (89)
T 2xko_C 5 NYLNHPTFGLLYQICS 20 (89)
T ss_dssp CEEEETTTEEEEEEEE
T ss_pred ccccCCccchhheeee
Confidence 4999999988766544
No 28
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=22.73 E-value=1.8e+02 Score=21.47 Aligned_cols=57 Identities=7% Similarity=0.139 Sum_probs=38.7
Q ss_pred EEEEEcCcceEEEEeccccC--CHHHHHHHHHhCC--CCCCCcEEEc-CchHHHHHHHHHHhcC
Q 032663 61 HAVYVGKSRRQYYLTSDVIC--HPLFQELIERSGG--FDDEGEVVVA-CEVVLFEHLLWMLESS 119 (136)
Q Consensus 61 ~~VyVG~e~~RfvVp~~~L~--hp~F~~LL~~aee--f~~~G~l~iP-Cd~~~Fe~ll~~l~~~ 119 (136)
+.+.||+ ++|-+.-..|. .|.|+.++...-. =.....|.|+ .+...|+.++..+-.+
T Consensus 34 v~l~v~~--~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt~ 95 (256)
T 3hve_A 34 AHLVLDG--EEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSG 95 (256)
T ss_dssp EEEEETT--EEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHHS
T ss_pred eEEEECC--EEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccCC
Confidence 4566774 78888888884 6999998864321 1134567776 6899999999998776
No 29
>1ytr_A Bacteriocin plantaricin A; antibiotic, pheromone, amphipathic helix, micelle; NMR {Synthetic}
Probab=22.26 E-value=41 Score=17.67 Aligned_cols=12 Identities=25% Similarity=0.423 Sum_probs=9.7
Q ss_pred hHHHHHHHHHhc
Q 032663 6 KLTKLKSAMKKL 17 (136)
Q Consensus 6 ~i~kLk~~lkKw 17 (136)
.|+..+++.|||
T Consensus 13 aikqvkklfkkw 24 (26)
T 1ytr_A 13 AIKQVKKLFKKW 24 (26)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHHc
Confidence 567788888998
No 30
>1y6i_A Mg-chelatase cofactor GUN4; helix-bundle, porphyrin binding, ligand binding protein; 1.78A {Synechocystis SP} SCOP: a.118.1.22 a.261.1.1
Probab=21.24 E-value=9 Score=30.42 Aligned_cols=30 Identities=10% Similarity=0.132 Sum_probs=20.4
Q ss_pred CCCCCceEEEEEcCcceEEEEeccccCCHHHH
Q 032663 54 NVNAKELHAVYVGKSRRQYYLTSDVICHPLFQ 85 (136)
Q Consensus 54 ~~vpkG~~~VyVG~e~~RfvVp~~~L~hp~F~ 85 (136)
..+|+||+|+.-.- |=.-|=.++|+||.|.
T Consensus 200 l~AP~GHLP~~~~l--rG~~l~~~ll~hpa~~ 229 (233)
T 1y6i_A 200 LSAPQGHLPLLNQL--RGVRVAESLYRHPVWS 229 (233)
T ss_dssp TTSCTTCCSCCCCT--TCTHHHHHHHTSTHHH
T ss_pred CCCCCCCCCCcccc--chHHHHHHHHCCcccc
Confidence 35899999986421 1122556789999984
No 31
>3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, STRU genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B}
Probab=20.58 E-value=68 Score=24.62 Aligned_cols=46 Identities=11% Similarity=0.218 Sum_probs=33.1
Q ss_pred CHHHHHHHHHhCCCCCCCcEEEcCchHHHHHHHHHHhcCCCCCccCHHHHH
Q 032663 81 HPLFQELIERSGGFDDEGEVVVACEVVLFEHLLWMLESSTGTQLGSMQELV 131 (136)
Q Consensus 81 hp~F~~LL~~aeef~~~G~l~iPCd~~~Fe~ll~~l~~~~~~~~~sl~el~ 131 (136)
+.++++|+++-.. +.+.+|--......++.++++. +.+...|.+++
T Consensus 6 ~~~~~~l~~~i~~----~~~~LP~lp~~~~~l~~~~~~~-~~~~~~la~~I 51 (281)
T 3i7a_A 6 HQLLVGLLKKLKD----DALILPTLPEVAMRVQEVVGRP-DSSLKQVAEII 51 (281)
T ss_dssp HHHHHHHHHHHHT----TCSCCCCCCHHHHHHHHHHTST-TCCHHHHHHHH
T ss_pred HHHHHHHHHHHHh----CCCCCCCccHHHHHHHHHHcCC-CCCHHHHHHHH
Confidence 4566777776653 6788999999999999999877 55544455444
Done!