Query 032667
Match_columns 136
No_of_seqs 112 out of 1038
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 06:37:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032667.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032667hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq8_A Pectinesterase; hydrola 100.0 2.2E-47 7.6E-52 312.1 11.0 136 1-136 184-319 (319)
2 1xg2_A Pectinesterase 1; prote 100.0 2.3E-47 7.7E-52 311.8 10.4 136 1-136 180-315 (317)
3 2nsp_A Pectinesterase A; micha 100.0 3.1E-34 1E-38 236.2 7.4 114 1-128 206-341 (342)
4 3uw0_A Pectinesterase; right-h 100.0 1.9E-33 6.5E-38 233.2 8.2 112 1-127 231-364 (364)
5 3grh_A YBHC, acyl-COA thioeste 99.9 5E-25 1.7E-29 185.3 5.3 84 1-92 307-416 (422)
6 3grh_A YBHC, acyl-COA thioeste 71.1 1.8 6.1E-05 36.3 2.0 27 104-130 39-70 (422)
7 1xg2_A Pectinesterase 1; prote 66.6 4.5 0.00015 32.3 3.4 13 16-28 120-132 (317)
8 2nsp_A Pectinesterase A; micha 65.5 3.5 0.00012 33.3 2.6 13 16-28 142-154 (342)
9 1gq8_A Pectinesterase; hydrola 64.2 4.3 0.00015 32.5 2.9 12 48-59 163-174 (319)
10 3uw0_A Pectinesterase; right-h 58.7 5.1 0.00018 32.7 2.4 38 13-58 165-218 (364)
11 1f32_A Major pepsin inhibitor 24.3 48 0.0016 23.7 2.5 16 11-26 69-84 (149)
No 1
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=100.00 E-value=2.2e-47 Score=312.11 Aligned_cols=136 Identities=82% Similarity=1.349 Sum_probs=125.5
Q ss_pred CeecCCCCCCCCCeeEEEECcEEeeCCCCCCCCCCcceEecCCCCCCCceEEEcCccCCcccCCCCCCCCCCCCCCccEE
Q 032667 1 MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFY 80 (136)
Q Consensus 1 ~ITA~~r~~~~~~~GfvF~~C~i~~~~~~~~~~~~~~~yLGRPW~~~arvvf~~s~i~~~I~p~GW~~w~~~~~~~t~~f 80 (136)
+||||+|+++.+++||||++|+|+++++..+.....++||||||++||||||++|+|+++|+|+||.+|++..++++++|
T Consensus 184 ~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~~~~I~p~GW~~w~~~~~~~t~~y 263 (319)
T 1gq8_A 184 MVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYY 263 (319)
T ss_dssp EEEEECCCSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCSSTTCEEEEESCEECTTBCTTCCCCSSTTTTTTTCEE
T ss_pred EEEeCCCCCCCCCceEEEECCEEecCCCccccccceeEEecccCCCcceEEEEeccCCCcccccccCcCCCCCCCCeeEE
Confidence 48999999999999999999999998875433234589999999999999999999999999999999998878899999
Q ss_pred EEeecccCCCCCCCcccccceeeeCCHHHHhccCccccccCCCCCCCCCCCCCCCC
Q 032667 81 GEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 136 (136)
Q Consensus 81 ~Ey~n~GpGa~~s~Rv~w~~~l~~~s~~ea~~~t~~~~i~g~~W~p~~~~p~~~~~ 136 (136)
+||+|+|||+++++||+|++++++++++||++|+..+||+|++|+|.++|||.+||
T Consensus 264 ~Ey~n~GpGa~~~~Rv~w~~~~~l~~~~ea~~~t~~~~i~g~~W~p~~~~~~~~~~ 319 (319)
T 1gq8_A 264 GEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319 (319)
T ss_dssp EEESCBSGGGCCTTCCCCTTEEECCCHHHHHTTSHHHHSCGGGTSGGGTSCCCCCC
T ss_pred EEEccccCCCCcccccccccccccCCHHHHHhhhHHhhcCCCCCcCCCCccccCCC
Confidence 99999999999999999999777767899999999999999899999999999997
No 2
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=100.00 E-value=2.3e-47 Score=311.83 Aligned_cols=136 Identities=60% Similarity=1.045 Sum_probs=125.7
Q ss_pred CeecCCCCCCCCCeeEEEECcEEeeCCCCCCCCCCcceEecCCCCCCCceEEEcCccCCcccCCCCCCCCCCCCCCccEE
Q 032667 1 MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFY 80 (136)
Q Consensus 1 ~ITA~~r~~~~~~~GfvF~~C~i~~~~~~~~~~~~~~~yLGRPW~~~arvvf~~s~i~~~I~p~GW~~w~~~~~~~t~~f 80 (136)
+||||+|+++.+++||||++|+|+++++..+.....++||||||++||||||++|+|+++|+|+||.+|+++.++++++|
T Consensus 180 ~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~~~~I~p~GW~~w~~~~~~~t~~~ 259 (317)
T 1xg2_A 180 MVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYY 259 (317)
T ss_dssp EEEEECCCCTTSCCEEEEESCEEEECTTTGGGTTTSCEEEECCSSTTCEEEEESCEECTTBCTTCSCCSSTTTTTTTCEE
T ss_pred EEEecCcCCCCCCcEEEEECCEEecCCCccccccceeEEeecccCCCceEEEEecccCCcccccccccCCCCCCcCceEE
Confidence 48999999999999999999999998875433334589999999999999999999999999999999998878899999
Q ss_pred EEeecccCCCCCCCcccccceeeeCCHHHHhccCccccccCCCCCCCCCCCCCCCC
Q 032667 81 GEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 136 (136)
Q Consensus 81 ~Ey~n~GpGa~~s~Rv~w~~~l~~~s~~ea~~~t~~~~i~g~~W~p~~~~p~~~~~ 136 (136)
+||+|+|||+++++||+|++++++++++||++|+..+||+|++|+|.+++||.+||
T Consensus 260 ~Ey~n~GpGa~~~~Rv~w~~~~~l~~~~ea~~~t~~~~i~g~~W~p~~~~~~~~~~ 315 (317)
T 1xg2_A 260 GEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGL 315 (317)
T ss_dssp EEESCBSTTCCCTTSCCCTTEEEECCHHHHGGGSHHHHSCTHHHHGGGCCCCCCSS
T ss_pred EEEcCCCCCCCcccccccccccccCCHHHHHHhhHHhhcCCCCCcCCCCccccccc
Confidence 99999999999999999999777767899999999999999889999999999987
No 3
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=100.00 E-value=3.1e-34 Score=236.24 Aligned_cols=114 Identities=27% Similarity=0.420 Sum_probs=96.3
Q ss_pred CeecCCCCCCCCCeeEEEECcEEeeCCCCCCCCCCcceEecCCCCCCC--------------ceEEEcCccCCcccCCCC
Q 032667 1 MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYS--------------RTVIMQSSITDVIHPAGW 66 (136)
Q Consensus 1 ~ITA~~r~~~~~~~GfvF~~C~i~~~~~~~~~~~~~~~yLGRPW~~~a--------------rvvf~~s~i~~~I~p~GW 66 (136)
+||||+| ++.+++||||++|+|+++++..+ .+++||||||++|+ ||||++|+|+++|+ ||
T Consensus 206 ~ItA~~~-~~~~~~G~vf~~c~i~~~~~~~~---~~~~yLGRpW~~~s~~~~~~~a~p~~~~r~vf~~t~~~~~I~--GW 279 (342)
T 2nsp_A 206 YLTAPST-NINQKYGLVITNSRVIRESDSVP---AKSYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHIY--GW 279 (342)
T ss_dssp EEEEECC-BTTCSCCEEEESCEEEESSTTSC---TTCEEEECCCCCEEEETTEEEECTTBCCEEEEESCEECTTEE--EC
T ss_pred EEEccCC-CCCCCCEEEEEcCEEecCCCCCc---cccEEEEeccccccccccccccCCccceeEEEEccccCcccc--cc
Confidence 4999975 56899999999999999876432 35899999999999 99999999999999 99
Q ss_pred CCCCCCC--------CCCccEEEEeecccCCCCCCCcccccceeeeCCHHHHhccCccccccCCCCCCCC
Q 032667 67 HEWDGNF--------ALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGST 128 (136)
Q Consensus 67 ~~w~~~~--------~~~t~~f~Ey~n~GpGa~~s~Rv~w~~~l~~~s~~ea~~~t~~~~i~g~~W~p~~ 128 (136)
.+|++.. .+++++|+||+|+|||++++. +.++| +++||++|+.++||+| |+|..
T Consensus 280 ~~w~~~~~~~~~~~~~~~~~~f~EY~n~GpGa~~~~---~~~~l---~~~ea~~~t~~~~i~~--W~p~~ 341 (342)
T 2nsp_A 280 DKMSGKDKNGNTIWFNPEDSRFFEYKSYGAGATVSK---DRRQL---TDAQAAEYTQSKVLGD--WTPTL 341 (342)
T ss_dssp CCEEEECTTSCEEEECGGGSEEEEESCBSTTCCCST---TSCBC---CHHHHGGGSHHHHHTT--CCCCC
T ss_pred cccCCCCccCceeecccCccEEEEEecccCCCCCCC---CceEC---CHHHHHhhhHHhhhcc--CCCCC
Confidence 9998642 235789999999999998752 23455 9999999999999975 99863
No 4
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=100.00 E-value=1.9e-33 Score=233.25 Aligned_cols=112 Identities=21% Similarity=0.362 Sum_probs=92.8
Q ss_pred CeecCCCCCCCCCeeEEEECcEEeeCCCCCCCCCCcceEecCCCCCC--------------CceEEEcCccCCcccCCCC
Q 032667 1 MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEY--------------SRTVIMQSSITDVIHPAGW 66 (136)
Q Consensus 1 ~ITA~~r~~~~~~~GfvF~~C~i~~~~~~~~~~~~~~~yLGRPW~~~--------------arvvf~~s~i~~~I~p~GW 66 (136)
+||||+|. +.+++||||++|+|+++++.. .+++||||||+++ +||||++|+|+++| +||
T Consensus 231 ~ITA~~~~-~~~~~G~vf~~c~i~~~~~~~----~~~~yLGRPW~~~s~~~~g~yadp~a~~rvVf~~s~m~~~I--~GW 303 (364)
T 3uw0_A 231 YITAPSTL-TTSPYGLIFINSRLTKEPGVP----ANSFALGRPWHPTTTFADGRYADPAAIGQSVFINTTMDDHI--YGW 303 (364)
T ss_dssp EEEEECCC-TTCSCCEEEESCEEEECTTCC----SSCEEEECCCCCEEECSSCEEECTTCCCEEEEESCEECTTE--EEC
T ss_pred EEEeCCcC-CCCCcEEEEEeeEEecCCCCc----cccEEeccccccccccccccccccCccceEEEEeCCCCcee--ecc
Confidence 49999764 578999999999999987642 3589999999985 49999999999999 999
Q ss_pred CCCCCCCC--------CCccEEEEeecccCCCCCCCcccccceeeeCCHHHHhccCccccccCCCCCCC
Q 032667 67 HEWDGNFA--------LNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGS 127 (136)
Q Consensus 67 ~~w~~~~~--------~~t~~f~Ey~n~GpGa~~s~Rv~w~~~l~~~s~~ea~~~t~~~~i~g~~W~p~ 127 (136)
.+|++... .++++|+||+|+||||+++.+. ++| +++||++|+.++||+| |+|.
T Consensus 304 ~~w~~~~~~~~~~~~~~~~~~f~Ey~n~GpGa~~~~~r---~~l---s~~ea~~~t~~~~l~g--W~P~ 364 (364)
T 3uw0_A 304 DKMSGKDKQGEKIWFYPQDSRFFEANSQGPGAAINEGR---RQL---SAEQLKAFTLPMIFPD--WAVH 364 (364)
T ss_dssp CCEEEECTTSCEEEECGGGSEEEEESCBSTTCCCSTTS---CBC---CHHHHGGGSHHHHSTT--CCC-
T ss_pred cccCCCCccCceeeeccCCceEEEEeCCCCCCCcCCce---eEC---CHHHHhhccHHHhhcC--CCCC
Confidence 99986431 2457899999999999875431 244 9999999999999986 9984
No 5
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=99.90 E-value=5e-25 Score=185.25 Aligned_cols=84 Identities=23% Similarity=0.161 Sum_probs=71.2
Q ss_pred CeecCCCCCCCCCeeEEEECcEEeeCCCCCCCCCCcceEecCCCCCCCc----eEEEcCccCCcccC-CCCCCCCCCCC-
Q 032667 1 MHETQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSR----TVIMQSSITDVIHP-AGWHEWDGNFA- 74 (136)
Q Consensus 1 ~ITA~~r~~~~~~~GfvF~~C~i~~~~~~~~~~~~~~~yLGRPW~~~ar----vvf~~s~i~~~I~p-~GW~~w~~~~~- 74 (136)
+|||+ |+++.+++||||++|+|+++++ +++||||||++|+| |||++|+|+++|+| +||.+|....+
T Consensus 307 ~ITA~-~t~~~~~~Gfvf~nC~ita~~~-------~~~yLGRPW~~ysrt~~qVVf~~s~l~~~I~p~~GW~~m~~s~r~ 378 (422)
T 3grh_A 307 YVFAP-ATLSNIYYGFLAVNSRFNAFGD-------GVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRP 378 (422)
T ss_dssp EEEEE-CCBTTCCCCEEEESCEEEECSS-------SCBEEEEEECCSTTBCCEEEEESCEECTTBCSSCCEEEEETTCCC
T ss_pred EEEec-CCCCCCCCEEEEECCEEEeCCC-------CCEEcCCCCCCcCCcCccEEEEeCcccCccCCCCCchhhhccCCC
Confidence 48998 5667899999999999998753 58999999999998 79999999999998 99999943211
Q ss_pred --------------------CCccEEEEeecccCCCCC
Q 032667 75 --------------------LNTLFYGEHQNAGAGAGT 92 (136)
Q Consensus 75 --------------------~~t~~f~Ey~n~GpGa~~ 92 (136)
....||.||+|+|+|+..
T Consensus 379 f~~~~~~~~~~~~~~r~l~~~~~nR~~ey~n~g~g~~~ 416 (422)
T 3grh_A 379 FAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKV 416 (422)
T ss_dssp CCCCCCEEETTTEEECCTTCTTSCEEEEESCBSGGGC-
T ss_pred cccccccccccccccccCCCcchhheeEecccCCCccc
Confidence 136899999999999865
No 6
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=71.09 E-value=1.8 Score=36.29 Aligned_cols=27 Identities=37% Similarity=0.474 Sum_probs=22.1
Q ss_pred eCCHHHHhccCcccccc-----CCCCCCCCCC
Q 032667 104 ITSATEAQAFTPGSFIA-----GSSWLGSTGF 130 (136)
Q Consensus 104 ~~s~~ea~~~t~~~~i~-----g~~W~p~~~~ 130 (136)
|||++||+.||.+++|+ ++.|.|....
T Consensus 39 ~ls~~ea~~~~~~~y~~~~~~~~~~w~P~~~~ 70 (422)
T 3grh_A 39 ILSAKEAQNFDAQHYFASLTPGAAAWNPSPIT 70 (422)
T ss_dssp BCCHHHHTTCSHHHHTCCSSSSCCCCCCCCCC
T ss_pred ccCHHHHhhhcHhhHHhhcCCCCCCcCCCccC
Confidence 45999999999999997 3359998743
No 7
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=66.60 E-value=4.5 Score=32.33 Aligned_cols=13 Identities=46% Similarity=0.598 Sum_probs=8.8
Q ss_pred EEEECcEEeeCCC
Q 032667 16 IVIQKSRIGATSD 28 (136)
Q Consensus 16 fvF~~C~i~~~~~ 28 (136)
.+|.+|+|.+..+
T Consensus 120 ~~f~~c~f~g~QD 132 (317)
T 1xg2_A 120 SVINRCRIDAYQD 132 (317)
T ss_dssp EEEESCEEECSTT
T ss_pred EEEEEeEeCcccc
Confidence 4677777777654
No 8
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=65.45 E-value=3.5 Score=33.29 Aligned_cols=13 Identities=0% Similarity=-0.051 Sum_probs=10.6
Q ss_pred EEEECcEEeeCCC
Q 032667 16 IVIQKSRIGATSD 28 (136)
Q Consensus 16 fvF~~C~i~~~~~ 28 (136)
.+|.+|+|.+..+
T Consensus 142 ~~f~~c~f~G~QD 154 (342)
T 2nsp_A 142 AYFKDVSLVGYQA 154 (342)
T ss_dssp EEEEEEEEECSTT
T ss_pred EEEEeeEEecccc
Confidence 4799999998775
No 9
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=64.24 E-value=4.3 Score=32.47 Aligned_cols=12 Identities=17% Similarity=0.296 Sum_probs=8.5
Q ss_pred CceEEEcCccCC
Q 032667 48 SRTVIMQSSITD 59 (136)
Q Consensus 48 arvvf~~s~i~~ 59 (136)
+.++|.+|.|-.
T Consensus 163 ~~a~f~~c~i~~ 174 (319)
T 1gq8_A 163 AAVVLQDCDIHA 174 (319)
T ss_dssp CEEEEESCEEEE
T ss_pred CcEEEEeeEEEE
Confidence 568888888743
No 10
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=58.73 E-value=5.1 Score=32.68 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=24.4
Q ss_pred CeeEEEECcEEeeCCCCCCCCCCcceEec---CCCCC-------------CCceEEEcCccC
Q 032667 13 NTGIVIQKSRIGATSDLKPVQGSFPTYLG---RPWKE-------------YSRTVIMQSSIT 58 (136)
Q Consensus 13 ~~GfvF~~C~i~~~~~~~~~~~~~~~yLG---RPW~~-------------~arvvf~~s~i~ 58 (136)
.--.+|.+|+|.+..+ ..|+. |-+-. .+++||.+|.|-
T Consensus 165 ~D~~~f~~C~f~G~QD--------TLy~~~~gr~yf~~c~I~GtvDFIFG~a~a~f~~c~i~ 218 (364)
T 3uw0_A 165 SDKARFKAVKLEGYQD--------TLYSKTGSRSYFSDCEISGHVDFIFGSGITVFDNCNIV 218 (364)
T ss_dssp CEEEEEEEEEEECSBS--------CEEECTTCEEEEESCEEEESEEEEEESSEEEEESCEEE
T ss_pred CCeEEEEeeEEEeccc--------ceEeCCCCCEEEEcCEEEcCCCEECCcceEEEEeeEEE
Confidence 3457899999998865 44543 22111 267888888874
No 11
>1f32_A Major pepsin inhibitor PI-3; proteinase inhibitor, hydrolase inhibitor; 1.75A {Ascaris suum} SCOP: d.62.1.1 PDB: 1f34_B*
Probab=24.32 E-value=48 Score=23.69 Aligned_cols=16 Identities=0% Similarity=-0.147 Sum_probs=13.6
Q ss_pred CCCeeEEEECcEEeeC
Q 032667 11 NQNTGIVIQKSRIGAT 26 (136)
Q Consensus 11 ~~~~GfvF~~C~i~~~ 26 (136)
.+.+=|+|+.|.|+++
T Consensus 69 ~Dttqy~FdGCvVqnN 84 (149)
T 1f32_A 69 QDMKMFNFVGCSVLGN 84 (149)
T ss_dssp TTCEEEEETTEEEETT
T ss_pred ccceEEEEeeeEEEcC
Confidence 4678899999999966
Done!