Query 032674
Match_columns 136
No_of_seqs 102 out of 345
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 06:46:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032674.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032674hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydu_A AT5G01610; DUF538, stru 100.0 2.5E-44 8.6E-49 277.7 4.2 114 15-136 49-162 (170)
2 2f9z_C Protein (chemotaxis met 43.6 27 0.00091 25.9 4.1 36 18-57 108-149 (159)
3 2wme_A BADH, betaine aldehyde 42.5 14 0.00049 31.5 2.7 30 6-35 171-203 (490)
4 3k9d_A LMO1179 protein, aldehy 42.0 18 0.00063 30.3 3.3 30 6-35 137-173 (464)
5 3r64_A NAD dependent benzaldeh 41.2 19 0.00064 30.7 3.3 30 6-35 177-210 (508)
6 3k2w_A Betaine-aldehyde dehydr 40.3 19 0.00066 30.5 3.2 30 6-35 177-209 (497)
7 2o2p_A Formyltetrahydrofolate 39.0 21 0.0007 30.6 3.2 30 6-35 207-239 (517)
8 3b4w_A Aldehyde dehydrogenase; 38.8 21 0.00071 30.3 3.2 30 6-35 175-207 (495)
9 1uzb_A 1-pyrroline-5-carboxyla 38.4 20 0.00069 30.5 3.1 30 6-35 202-234 (516)
10 1o04_A Aldehyde dehydrogenase, 38.1 18 0.00063 30.8 2.7 30 6-35 187-219 (500)
11 2w8n_A Succinate-semialdehyde 38.1 19 0.00063 30.5 2.7 30 6-35 175-207 (487)
12 1bxs_A Aldehyde dehydrogenase; 38.0 19 0.00064 30.7 2.7 30 6-35 188-220 (501)
13 2d4e_A 5-carboxymethyl-2-hydro 37.8 22 0.00076 30.3 3.2 30 6-35 191-223 (515)
14 3rh9_A Succinate-semialdehyde 37.5 20 0.00069 30.6 2.9 30 6-35 176-208 (506)
15 1a4s_A ALDH, betaine aldehyde 37.5 22 0.00077 30.2 3.2 30 6-35 184-216 (503)
16 1euh_A NADP dependent non phos 37.5 20 0.00069 30.1 2.9 30 6-35 172-204 (475)
17 1t90_A MMSDH, probable methylm 37.4 23 0.00078 29.9 3.2 30 6-35 170-202 (486)
18 4e3x_A Delta-1-pyrroline-5-car 36.5 26 0.0009 30.4 3.5 30 6-35 228-260 (563)
19 3ty7_A Putative aldehyde dehyd 36.4 20 0.0007 30.1 2.7 30 6-35 168-200 (478)
20 3ros_A NAD-dependent aldehyde 36.4 22 0.00075 30.2 2.9 30 6-35 152-184 (484)
21 1uxt_A Glyceraldehyde-3-phosph 36.1 24 0.00083 30.0 3.2 30 6-35 186-218 (501)
22 3ed6_A Betaine aldehyde dehydr 36.1 21 0.00071 30.6 2.8 30 6-35 199-231 (520)
23 3i44_A Aldehyde dehydrogenase; 35.9 25 0.00084 29.9 3.2 30 6-35 190-222 (497)
24 2imp_A Lactaldehyde dehydrogen 35.9 21 0.00072 30.0 2.7 30 6-35 171-203 (479)
25 3ju8_A Succinylglutamic semial 35.7 27 0.00091 29.5 3.3 30 6-35 168-200 (490)
26 3r31_A BADH, betaine aldehyde 35.6 23 0.00078 30.3 3.0 30 6-35 179-211 (517)
27 3iwj_A Putative aminoaldehyde 35.4 22 0.00074 30.3 2.7 30 6-35 180-212 (503)
28 4e4g_A Methylmalonate-semialde 35.0 27 0.00093 29.9 3.3 30 6-35 191-223 (521)
29 2ve5_A BADH, betaine aldehyde 34.8 23 0.00077 29.9 2.7 30 6-35 171-203 (490)
30 3jz4_A Succinate-semialdehyde 34.2 23 0.00079 29.8 2.7 30 6-35 174-206 (481)
31 4dng_A Uncharacterized aldehyd 34.1 31 0.0011 29.0 3.5 30 6-35 172-205 (485)
32 3qth_A Uncharacterized protein 33.6 19 0.00066 27.1 1.9 15 18-32 144-158 (176)
33 3u4j_A NAD-dependent aldehyde 33.3 24 0.00083 30.3 2.7 30 6-35 190-222 (528)
34 3ek1_A Aldehyde dehydrogenase; 32.9 29 0.001 29.6 3.2 30 6-35 197-229 (504)
35 3ifg_A Succinate-semialdehyde 31.9 27 0.00092 29.6 2.8 30 6-35 177-209 (484)
36 2nzc_A Hypothetical protein; s 31.9 10 0.00035 25.6 0.1 17 82-98 66-82 (86)
37 3qan_A 1-pyrroline-5-carboxyla 30.2 37 0.0013 29.2 3.4 30 6-35 201-233 (538)
38 3prl_A NADP-dependent glyceral 29.9 35 0.0012 29.0 3.2 30 6-35 181-213 (505)
39 3etf_A Putative succinate-semi 29.1 37 0.0013 28.3 3.1 30 6-35 155-187 (462)
40 2r41_A Uncharacterized protein 28.3 1.3E+02 0.0045 21.0 5.4 37 18-56 30-66 (110)
41 2oqm_A Hypothetical protein; s 27.5 24 0.0008 27.1 1.5 15 18-32 163-177 (192)
42 4f9i_A Proline dehydrogenase/d 23.0 59 0.002 30.6 3.5 30 6-35 695-727 (1026)
43 2k8q_A Protein SHQ1; beta-sand 22.0 68 0.0023 23.2 3.0 19 40-58 63-81 (134)
No 1
>1ydu_A AT5G01610; DUF538, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG unknown function; NMR {Arabidopsis thaliana} SCOP: b.162.1.1
Probab=100.00 E-value=2.5e-44 Score=277.73 Aligned_cols=114 Identities=25% Similarity=0.503 Sum_probs=108.0
Q ss_pred cchhhHHHHHHhCCCCCCCcCcCCceEEEEEccCCeEEEEeCCeEEEEEeecCEEEEEeeEEEEEEecCceeeccceEEE
Q 032674 15 EGMKVASSLLEEFGLPLGLLPLADVIEVGFVQTTGYMWILQKKKVEHSFKMVKKLVSYDTEITGYVNKNVIKKLKGVKAK 94 (136)
Q Consensus 15 ~~~~ta~elL~~~glP~GLLP~~~V~~y~l~~~tG~f~v~l~~~c~~~f~~~~~~v~Y~~~ItG~i~~g~i~~L~GVk~K 94 (136)
.+.+++||||++||||+|||| ++|++|+||++||+|||+|+++|+|+|+ ++++|+|+++|||+|++|+|++|+||++|
T Consensus 49 ~~~~ta~elL~e~gLP~GLLP-~~V~~Y~l~~~tG~f~V~l~~~C~~~f~-~~~~v~Y~~~VtG~l~~GkI~~L~GVk~K 126 (170)
T 1ydu_A 49 KMQKPLPELLKEYDLPIGIFP-GDATNYEFDEETKKLTVLIPSICEVGYK-DSSVLKFTTTVTGHLEKGKLTDVEGIKTK 126 (170)
T ss_dssp TTTSSCHHHHHHHSCTTCTTT-SSSCEEEECTTTCSEEEECSSCEEEEST-TSSEEEECSEEEEEECSSCEEEEESCEEE
T ss_pred cccccHHHHHHHcCCCCCcCC-CCCeEEEEECCCcEEEEEeCCCEEEEec-CccEEEEcCEEEEEEcCCcCccccCEEEE
Confidence 467899999999999999999 8999999999999999999999999998 48999999999999999999999999999
Q ss_pred EEEeecceeEEEEcCCCCCeEEEEecceEeeeeeccccccCC
Q 032674 95 ELMLWPPVSEIKVDDPPTGKIHFKSLAGITKTFPIEAFAAGQ 136 (136)
Q Consensus 95 ~lf~W~~I~eI~vd~~~~~~I~F~~~g~~sksFP~~~F~~~~ 136 (136)
+| +|++|++|.|++ ++|+|++ | ++++||+++|+.++
T Consensus 127 ~L-lWv~V~eI~v~~---~kI~F~v-G-i~ksfp~saFe~~~ 162 (170)
T 1ydu_A 127 VM-IWVKVTSISTDA---SKVYFTA-G-MKKSRSRDAYGVQR 162 (170)
T ss_dssp SS-SEESCCCBEECS---SSEECTT-S-SSSCCCHHHHSSCC
T ss_pred EE-EEeeEEEEEEeC---CEEEEEE-c-CcccccHHHhcCCc
Confidence 99 999999999965 8999996 5 79999999999874
No 2
>2f9z_C Protein (chemotaxis methylation protein); bacterial chemotaxis, signal transduction, receptor deamidas aspartyl phosphatase, protein complex; 2.40A {Thermotoga maritima} SCOP: d.194.1.3
Probab=43.63 E-value=27 Score=25.85 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=27.8
Q ss_pred hhHHHHHHhCCCC------CCCcCcCCceEEEEEccCCeEEEEeCC
Q 032674 18 KVASSLLEEFGLP------LGLLPLADVIEVGFVQTTGYMWILQKK 57 (136)
Q Consensus 18 ~ta~elL~~~glP------~GLLP~~~V~~y~l~~~tG~f~v~l~~ 57 (136)
+.|.++|+++|+| .|--+. .|. |+..||.+|++.-.
T Consensus 108 ~~a~~~L~~~gI~i~aeD~GG~~gR-~i~---f~~~tG~v~vk~~~ 149 (159)
T 2f9z_C 108 EAVKKHLKDFGIKLLAEDTGGNRAR-SVE---YNIETGKLLVRKVG 149 (159)
T ss_dssp HHHHHHHHHTTCCEEEEEECCSSCE-EEE---EETTTTEEEEECC-
T ss_pred HHHHHHHHHCCCcEEEEeCCCCCCc-EEE---EECCCCEEEEEEcC
Confidence 4688999999999 577773 343 78899999998643
No 3
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=42.46 E-value=14 Score=31.45 Aligned_cols=30 Identities=23% Similarity=0.288 Sum_probs=24.4
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|++.|||.|++-
T Consensus 171 NtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~ 203 (490)
T 2wme_A 171 NAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFN 203 (490)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEE
Confidence 4678888888777655 88999999999875
No 4
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=41.97 E-value=18 Score=30.26 Aligned_cols=30 Identities=23% Similarity=0.358 Sum_probs=24.4
Q ss_pred ccEEEeccccchhhHH-------HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS-------SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~-------elL~~~glP~GLLP 35 (136)
++.|.++++.+..++. ++|.+.|||.|++-
T Consensus 137 N~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~ 173 (464)
T 3k9d_A 137 NSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAIS 173 (464)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEE
T ss_pred CeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 4678899998877765 55799999999986
No 5
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=41.21 E-value=19 Score=30.70 Aligned_cols=30 Identities=27% Similarity=0.463 Sum_probs=25.1
Q ss_pred ccEEEeccccchhhH----HHHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVA----SSLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta----~elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++ .++|++.|||.|++=
T Consensus 177 N~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~ 210 (508)
T 3r64_A 177 NAVVIKPASDTPVTGGVIPARIFEEAGVPAGVIS 210 (508)
T ss_dssp CEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEE
T ss_pred CEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEE
Confidence 467888998887777 589999999999875
No 6
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=40.29 E-value=19 Score=30.52 Aligned_cols=30 Identities=30% Similarity=0.390 Sum_probs=24.4
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.++++.+..++. ++|++.|||.|++-
T Consensus 177 N~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~ 209 (497)
T 3k2w_A 177 NTMVLKPTQETPLATTELGRIAKEAGLPDGVLN 209 (497)
T ss_dssp CEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCCCChHHHHHHHHHHHHhCcCcCeEE
Confidence 4678888888777654 88999999999874
No 7
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=39.00 E-value=21 Score=30.64 Aligned_cols=30 Identities=27% Similarity=0.287 Sum_probs=24.3
Q ss_pred ccEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVA---SSLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta---~elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++ .++|++.|||.|++-
T Consensus 207 NtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~ 239 (517)
T 2o2p_A 207 NTVVIKPAQVTPLTALKFAELTLKAGIPKGVVN 239 (517)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCCccHHHHHHHHHHHHHhCCCcCeEE
Confidence 467888888877665 489999999999875
No 8
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=38.76 E-value=21 Score=30.35 Aligned_cols=30 Identities=33% Similarity=0.440 Sum_probs=24.4
Q ss_pred ccEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVA---SSLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta---~elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++ .++|++.|||.|++-
T Consensus 175 N~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~ 207 (495)
T 3b4w_A 175 CTIVLKPAAETPLTANALAEVFAEVGLPEGVLS 207 (495)
T ss_dssp CEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEecCCccHHHHHHHHHHHHHhCCCcCeEE
Confidence 467888888877765 489999999999875
No 9
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=38.43 E-value=20 Score=30.55 Aligned_cols=30 Identities=27% Similarity=0.489 Sum_probs=24.5
Q ss_pred ccEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVA---SSLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta---~elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++ .++|++.|||.|++-
T Consensus 202 N~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~ 234 (516)
T 1uzb_A 202 NTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVN 234 (516)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEE
T ss_pred CeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEE
Confidence 467888988887766 488999999999875
No 10
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=38.15 E-value=18 Score=30.77 Aligned_cols=30 Identities=33% Similarity=0.425 Sum_probs=24.3
Q ss_pred ccEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVA---SSLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta---~elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++ .++|++.|||.|++-
T Consensus 187 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 219 (500)
T 1o04_A 187 NVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219 (500)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CEEEEECCccChHHHHHHHHHHHHhCCCcCeEE
Confidence 467888888876665 489999999999875
No 11
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=38.11 E-value=19 Score=30.55 Aligned_cols=30 Identities=30% Similarity=0.333 Sum_probs=24.2
Q ss_pred ccEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVA---SSLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta---~elL~~~glP~GLLP 35 (136)
++.|.++++.+..++ .++|++.|||.|++=
T Consensus 175 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 207 (487)
T 2w8n_A 175 CTVVVKPAEDTPFSALALAELASQAGIPSGVYN 207 (487)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CEEEEECCCcchHHHHHHHHHHHHhCCCCCeEE
Confidence 467888888777766 489999999999874
No 12
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=37.96 E-value=19 Score=30.74 Aligned_cols=30 Identities=37% Similarity=0.472 Sum_probs=24.4
Q ss_pred ccEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVA---SSLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta---~elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++ .++|++.|||.|++-
T Consensus 188 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~ 220 (501)
T 1bxs_A 188 NTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVN 220 (501)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CeeeccCCCccHHHHHHHHHHHHHhCCCcceEE
Confidence 467888888887765 489999999999875
No 13
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=37.77 E-value=22 Score=30.33 Aligned_cols=30 Identities=33% Similarity=0.343 Sum_probs=24.3
Q ss_pred ccEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVA---SSLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta---~elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++ .++|++.|||.|++-
T Consensus 191 N~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~ 223 (515)
T 2d4e_A 191 NTVVLKPAEWSPFTATKLAEILKEADLPPGVFN 223 (515)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEE
T ss_pred CeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEE
Confidence 467888888777766 489999999999875
No 14
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=37.54 E-value=20 Score=30.59 Aligned_cols=30 Identities=23% Similarity=0.267 Sum_probs=24.5
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.++++.+..++. ++|.+.|||.|++-
T Consensus 176 N~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~ 208 (506)
T 3rh9_A 176 CPSVIKPASETPLTMIAFFSVMDKLDLPDGMVN 208 (506)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEE
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHhCcChhhEE
Confidence 4678888888777655 88999999999875
No 15
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=37.49 E-value=22 Score=30.20 Aligned_cols=30 Identities=27% Similarity=0.398 Sum_probs=24.3
Q ss_pred ccEEEeccccchhhH---HHHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVA---SSLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta---~elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++ .++|++.|||.|++-
T Consensus 184 N~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~ 216 (503)
T 1a4s_A 184 NAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVN 216 (503)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCCCChHHHHHHHHHHHHhCCCcCeEE
Confidence 467888888777665 489999999999875
No 16
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=37.47 E-value=20 Score=30.10 Aligned_cols=30 Identities=23% Similarity=0.317 Sum_probs=24.2
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|.+.|||.|++-
T Consensus 172 N~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~ 204 (475)
T 1euh_A 172 NVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFN 204 (475)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEE
T ss_pred CEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEE
Confidence 4678888888777654 88999999999864
No 17
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=37.40 E-value=23 Score=29.92 Aligned_cols=30 Identities=27% Similarity=0.413 Sum_probs=23.9
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|++.|||.|++-
T Consensus 170 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 202 (486)
T 1t90_A 170 NTFILKPSERTPLLTEKLVELFEKAGLPKGVFN 202 (486)
T ss_dssp CEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCCCChHHHHHHHHHHHHhCCCCCEEE
Confidence 4578888887766654 89999999999875
No 18
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=36.55 E-value=26 Score=30.42 Aligned_cols=30 Identities=27% Similarity=0.388 Sum_probs=24.2
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..+++ ++|++.|||.|++=
T Consensus 228 NtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvn 260 (563)
T 4e3x_A 228 NVVLWKPSDTAMLASYAVYRILREAGLPPNIIQ 260 (563)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCCCChHHHHHHHHHHHHhCCCCCeEE
Confidence 4678888887776655 88999999999874
No 19
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=36.42 E-value=20 Score=30.06 Aligned_cols=30 Identities=30% Similarity=0.437 Sum_probs=24.2
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|++.|||.|++-
T Consensus 168 N~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~ 200 (478)
T 3ty7_A 168 SPVVLKPSEETPFAAVILAEIFDKVGVPKGVFN 200 (478)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEE
T ss_pred CeEEEECCCcchHHHHHHHHHHHHhCcCcCeEE
Confidence 4678888887776654 88999999999875
No 20
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=36.36 E-value=22 Score=30.16 Aligned_cols=30 Identities=20% Similarity=0.232 Sum_probs=24.5
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.++++.+..++. ++|++.|||.|++-
T Consensus 152 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 184 (484)
T 3ros_A 152 NPILLKHAHNVPGSAALTAKIIKRAGAPEGSLI 184 (484)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEE
T ss_pred CEEEEECCCCChHHHHHHHHHHHHhCcCcCeEE
Confidence 4678888888776655 88999999999874
No 21
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=36.11 E-value=24 Score=29.96 Aligned_cols=30 Identities=23% Similarity=0.208 Sum_probs=24.1
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|++.|||.|++-
T Consensus 186 N~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~ 218 (501)
T 1uxt_A 186 NAVVVKPSISDPLPAAMAVKALLDAGFPPDAIA 218 (501)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEE
Confidence 4678888887777654 88999999999875
No 22
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=36.11 E-value=21 Score=30.63 Aligned_cols=30 Identities=30% Similarity=0.371 Sum_probs=24.2
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|++.|||.|++-
T Consensus 199 NtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvn 231 (520)
T 3ed6_A 199 CSLVMKPSEITPLTTIRVFELMEEVGFPKGTIN 231 (520)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEE
T ss_pred CEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEE
Confidence 4678888887777654 88999999999875
No 23
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=35.95 E-value=25 Score=29.94 Aligned_cols=30 Identities=30% Similarity=0.319 Sum_probs=23.9
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|++.|||.|++-
T Consensus 190 N~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvn 222 (497)
T 3i44_A 190 CTMVLKPSEIAPLSAMLFAEILDEAALPSGVFN 222 (497)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCcccHHHHHHHHHHHHHhCcCCCeEE
Confidence 4578888887766654 88999999999875
No 24
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=35.94 E-value=21 Score=30.04 Aligned_cols=30 Identities=30% Similarity=0.423 Sum_probs=24.0
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|++.|||.|++=
T Consensus 171 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 203 (479)
T 2imp_A 171 NTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFN 203 (479)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CEEEEECCccchHHHHHHHHHHHHhCCCcCeEE
Confidence 4678888887777654 88999999999864
No 25
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=35.66 E-value=27 Score=29.54 Aligned_cols=30 Identities=40% Similarity=0.370 Sum_probs=24.3
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|.+.|||.|++-
T Consensus 168 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 200 (490)
T 3ju8_A 168 NCVVFKPSELTPKVAELTLKAWIQAGLPAGVLN 200 (490)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEE
T ss_pred CeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEE
Confidence 4678888887777654 78999999999874
No 26
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=35.64 E-value=23 Score=30.34 Aligned_cols=30 Identities=37% Similarity=0.371 Sum_probs=24.2
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.++++.+..++. ++|++.|||.|++-
T Consensus 179 N~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~ 211 (517)
T 3r31_A 179 NAMVFKPSENTPLGALKIAEILIEAGLPKGLFN 211 (517)
T ss_dssp CEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEEcCcccHHHHHHHHHHHHHhCcCcccEE
Confidence 4678888887766654 88999999999885
No 27
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=35.39 E-value=22 Score=30.26 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=24.3
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|++.|||.|++-
T Consensus 180 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 212 (503)
T 3iwj_A 180 CAAILKPSELASLTCLELGEICKEVGLPPGVLN 212 (503)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CeEEEECCCcchHHHHHHHHHHHHhCcCcCeEE
Confidence 4678888888777655 88999999999875
No 28
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=34.99 E-value=27 Score=29.90 Aligned_cols=30 Identities=33% Similarity=0.470 Sum_probs=24.3
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|++.|||.|++-
T Consensus 191 N~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~ 223 (521)
T 4e4g_A 191 NAFILKPSERDPSVPIRLAELMIEAGLPAGILN 223 (521)
T ss_dssp CEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCCcchHHHHHHHHHHHHhCCCcCeEE
Confidence 4678888888777655 88999999999875
No 29
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=34.76 E-value=23 Score=29.90 Aligned_cols=30 Identities=23% Similarity=0.288 Sum_probs=24.2
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|.+.|||.|++=
T Consensus 171 N~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~ 203 (490)
T 2ve5_A 171 NAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFN 203 (490)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CEEEEECCCcchHHHHHHHHHHHHhCcCcCeEE
Confidence 4678888887777654 88999999999874
No 30
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=34.19 E-value=23 Score=29.80 Aligned_cols=30 Identities=23% Similarity=0.199 Sum_probs=23.9
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|.+.|||.|++=
T Consensus 174 N~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~ 206 (481)
T 3jz4_A 174 CTMVLKPASQTPFSALALAELAIRAGVPAGVFN 206 (481)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEE
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEE
Confidence 4678888887766654 88999999999874
No 31
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=34.09 E-value=31 Score=28.98 Aligned_cols=30 Identities=30% Similarity=0.412 Sum_probs=24.4
Q ss_pred ccEEEeccccchhhH----HHHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVA----SSLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta----~elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++ .++|.+.|||.|++-
T Consensus 172 N~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~ 205 (485)
T 4dng_A 172 NSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLN 205 (485)
T ss_dssp CEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEE
Confidence 467888888877666 488999999999875
No 32
>3qth_A Uncharacterized protein; DINB/YFIT-like putative metalloenzymes, structural genomics, center for structural genomics, JCSG; HET: MSE; 2.20A {Colwellia psychrerythraea}
Probab=33.62 E-value=19 Score=27.13 Aligned_cols=15 Identities=7% Similarity=0.248 Sum_probs=13.9
Q ss_pred hhHHHHHHhCCCCCC
Q 032674 18 KVASSLLEEFGLPLG 32 (136)
Q Consensus 18 ~ta~elL~~~glP~G 32 (136)
-|||.+|+..|.|.|
T Consensus 144 tTAYaILR~~GV~LG 158 (176)
T 3qth_A 144 SMVYAIAKNNGVSVT 158 (176)
T ss_dssp HHHHHHHHHTTCCCC
T ss_pred HHHHHHHHhcCCCcC
Confidence 389999999999998
No 33
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=33.27 E-value=24 Score=30.26 Aligned_cols=30 Identities=30% Similarity=0.286 Sum_probs=24.2
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.++++.+..++. ++|.+.|||.|++-
T Consensus 190 N~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~ 222 (528)
T 3u4j_A 190 CTVVLKPSEFTSGTSIRLAELAREAGIPDGVFN 222 (528)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEE
Confidence 4678888887777654 88999999999874
No 34
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=32.85 E-value=29 Score=29.57 Aligned_cols=30 Identities=23% Similarity=0.303 Sum_probs=23.8
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|++.|||.|++=
T Consensus 197 N~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~ 229 (504)
T 3ek1_A 197 CTMIVRPADLTPLTALALGVLAEKAGIPAGVLQ 229 (504)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEE
T ss_pred CEEEEECCCcChHHHHHHHHHHHHhCCCcccEE
Confidence 4678888887766654 88999999999875
No 35
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=31.95 E-value=27 Score=29.57 Aligned_cols=30 Identities=33% Similarity=0.298 Sum_probs=23.9
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|++.|||.|++-
T Consensus 177 N~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~ 209 (484)
T 3ifg_A 177 CPIVVKPAESTPFSALAMAFLAERAGVPKGVLS 209 (484)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEE
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHhCCCcccEE
Confidence 4678888887766654 88999999999875
No 36
>2nzc_A Hypothetical protein; sturctural genomics, TM1266, structural genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.95A {Thermotoga maritima} SCOP: d.58.18.14
Probab=31.92 E-value=10 Score=25.61 Aligned_cols=17 Identities=24% Similarity=0.475 Sum_probs=14.4
Q ss_pred cCceeeccceEEEEEEe
Q 032674 82 KNVIKKLKGVKAKELML 98 (136)
Q Consensus 82 ~g~i~~L~GVk~K~lf~ 98 (136)
.|+|.+|+||++|-+..
T Consensus 66 ~gkLg~i~GV~vKt~~~ 82 (86)
T 2nzc_A 66 SGKLGQISGVRVKTVPL 82 (86)
T ss_dssp HHHHHTSTTEEEEEEEC
T ss_pred HHHhCCCCCEEEEEEEe
Confidence 48899999999998753
No 37
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=30.23 E-value=37 Score=29.21 Aligned_cols=30 Identities=37% Similarity=0.479 Sum_probs=24.3
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|++.|||.|++-
T Consensus 201 N~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~ 233 (538)
T 3qan_A 201 NTVVLKPASTTPVVAAKFVEVLEDAGLPKGVIN 233 (538)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCCccHHHHHHHHHHHHHhCCCCCeEE
Confidence 4678888887776655 88999999999875
No 38
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=29.87 E-value=35 Score=29.02 Aligned_cols=30 Identities=27% Similarity=0.353 Sum_probs=24.3
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|++.|||.|.+-
T Consensus 181 N~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~ 213 (505)
T 3prl_A 181 NTVVFKPATQGSLSGIKMVEALADAGAPEGIIQ 213 (505)
T ss_dssp CEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEECCCCChHHHHHHHHHHHHhCcCcCeEE
Confidence 4667888888777655 88999999999875
No 39
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=29.08 E-value=37 Score=28.28 Aligned_cols=30 Identities=23% Similarity=0.277 Sum_probs=23.7
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..++. ++|.+.|||.|++-
T Consensus 155 N~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~ 187 (462)
T 3etf_A 155 NSYLLKHAPNVTGCAQMIARILAEAGTPAGVYG 187 (462)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEE
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEE
Confidence 4678888887766654 88999999999874
No 40
>2r41_A Uncharacterized protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics; 2.90A {Enterococcus faecalis}
Probab=28.29 E-value=1.3e+02 Score=21.05 Aligned_cols=37 Identities=14% Similarity=0.276 Sum_probs=30.4
Q ss_pred hhHHHHHHhCCCCCCCcCcCCceEEEEEccCCeEEEEeC
Q 032674 18 KVASSLLEEFGLPLGLLPLADVIEVGFVQTTGYMWILQK 56 (136)
Q Consensus 18 ~ta~elL~~~glP~GLLP~~~V~~y~l~~~tG~f~v~l~ 56 (136)
.+.-.++..+ =+|.+||+.+.-|.+....|.+.+...
T Consensus 30 d~~W~IID~~--lKgv~~Ld~ll~F~L~nn~~~lti~~s 66 (110)
T 2r41_A 30 DSIWLIIDLN--LKGVIPLNDLLHFDLLNNNGKVTVHFS 66 (110)
T ss_dssp HHHHHHHHHH--TBTTBCCCSEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHH--hcCCccccceEEEEEEecCCcEEEEEe
Confidence 3455677777 689999999999999988999888765
No 41
>2oqm_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.83A {Shewanella denitrificans} SCOP: a.213.1.3
Probab=27.51 E-value=24 Score=27.10 Aligned_cols=15 Identities=27% Similarity=0.485 Sum_probs=13.6
Q ss_pred hhHHHHHHhCCCCCC
Q 032674 18 KVASSLLEEFGLPLG 32 (136)
Q Consensus 18 ~ta~elL~~~glP~G 32 (136)
-|||.+|+..|.|.|
T Consensus 163 tTAYaILR~~GV~LG 177 (192)
T 2oqm_A 163 TTAYGILRHNGVEVG 177 (192)
T ss_dssp HHHHHHHHHHTCCCC
T ss_pred HHHHHHHHhcCCCCC
Confidence 389999999999988
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=23.01 E-value=59 Score=30.58 Aligned_cols=30 Identities=30% Similarity=0.316 Sum_probs=24.2
Q ss_pred ccEEEeccccchhhHH---HHHHhCCCCCCCcC
Q 032674 6 GGVVKKGHEEGMKVAS---SLLEEFGLPLGLLP 35 (136)
Q Consensus 6 ~ae~~~g~~~~~~ta~---elL~~~glP~GLLP 35 (136)
++.|.+.++.+..+++ ++|++.|||.|.+-
T Consensus 695 NtVVlKPse~tplsa~~l~ell~eAGlP~gvvn 727 (1026)
T 4f9i_A 695 NCVVFKPSGITSIIGWHLVELFREAGLPEGVFN 727 (1026)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEE
T ss_pred CEEEEEcCccchHHHHHHHHHHHHhCcCCCeEE
Confidence 4678888887776654 89999999999874
No 43
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=21.98 E-value=68 Score=23.16 Aligned_cols=19 Identities=5% Similarity=-0.041 Sum_probs=15.4
Q ss_pred eEEEEEccCCeEEEEeCCe
Q 032674 40 IEVGFVQTTGYMWILQKKK 58 (136)
Q Consensus 40 ~~y~l~~~tG~f~v~l~~~ 58 (136)
..-.||.++|.|.|++++.
T Consensus 63 ~kA~YD~d~~~~~VtLpK~ 81 (134)
T 2k8q_A 63 STAQYDSKDECINVKVAKL 81 (134)
T ss_dssp CEEEEETTTTEEEEEEEES
T ss_pred cceeEeccCCEEEEEEeCC
Confidence 4578888899999999853
Done!