Query 032682
Match_columns 136
No_of_seqs 150 out of 1456
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 06:56:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032682.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032682hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2k2d_A Ring finger and CHY zin 99.9 6.6E-25 2.2E-29 144.4 1.7 77 51-127 1-77 (79)
2 2ecm_A Ring finger and CHY zin 99.5 5.5E-15 1.9E-19 89.0 2.9 51 7-58 3-53 (55)
3 2kiz_A E3 ubiquitin-protein li 99.5 2.8E-14 9.7E-19 89.7 4.4 51 7-59 12-62 (69)
4 2ep4_A Ring finger protein 24; 99.5 2E-14 6.8E-19 91.6 3.1 51 8-60 14-64 (74)
5 1iym_A EL5; ring-H2 finger, ub 99.5 1.5E-14 5.3E-19 87.1 1.9 49 8-58 4-53 (55)
6 1x4j_A Ring finger protein 38; 99.4 2.6E-14 8.8E-19 91.5 2.4 50 8-59 22-71 (75)
7 2ecl_A Ring-box protein 2; RNF 99.4 6.1E-14 2.1E-18 91.6 3.9 54 5-59 11-75 (81)
8 2l0b_A E3 ubiquitin-protein li 99.4 7.5E-14 2.6E-18 92.9 3.6 50 8-59 39-88 (91)
9 2ect_A Ring finger protein 126 99.4 4.3E-14 1.5E-18 90.9 2.3 51 7-59 13-63 (78)
10 1t1h_A Gspef-atpub14, armadill 99.4 2.3E-13 8E-18 87.4 5.5 49 7-59 6-54 (78)
11 1g25_A CDK-activating kinase a 99.4 1.1E-13 3.8E-18 86.2 3.4 52 8-59 2-54 (65)
12 2ct2_A Tripartite motif protei 99.4 2.6E-13 9E-18 88.6 4.7 53 7-59 13-67 (88)
13 2ea6_A Ring finger protein 4; 99.4 1.4E-13 4.6E-18 86.0 2.8 52 7-59 13-67 (69)
14 2d8t_A Dactylidin, ring finger 99.4 2.5E-13 8.4E-18 86.1 3.5 49 6-59 12-60 (71)
15 2ecy_A TNF receptor-associated 99.4 1.7E-13 5.8E-18 85.6 2.5 49 7-59 13-61 (66)
16 2csy_A Zinc finger protein 183 99.4 3.6E-13 1.2E-17 87.3 4.1 47 8-59 14-60 (81)
17 3ng2_A RNF4, snurf, ring finge 99.4 1.6E-13 5.6E-18 86.3 2.4 52 7-59 8-62 (71)
18 2xeu_A Ring finger protein 4; 99.4 2.5E-13 8.5E-18 83.7 2.9 51 8-59 2-55 (64)
19 1v87_A Deltex protein 2; ring- 99.4 3E-13 1E-17 92.7 3.6 52 8-59 24-93 (114)
20 1chc_A Equine herpes virus-1 r 99.4 2.8E-13 9.6E-18 84.8 2.9 49 7-59 3-51 (68)
21 2yur_A Retinoblastoma-binding 99.3 1.6E-13 5.5E-18 87.8 1.5 49 8-60 14-64 (74)
22 2ysl_A Tripartite motif-contai 99.3 5.4E-13 1.9E-17 84.5 3.7 49 7-59 18-68 (73)
23 3dpl_R Ring-box protein 1; ubi 99.3 9E-13 3.1E-17 90.6 4.2 51 6-58 34-99 (106)
24 4ayc_A E3 ubiquitin-protein li 99.3 3.1E-13 1.1E-17 96.1 1.9 47 9-60 53-99 (138)
25 1e4u_A Transcriptional repress 99.3 1.1E-13 3.9E-18 90.2 -0.3 54 7-62 9-64 (78)
26 2djb_A Polycomb group ring fin 99.3 6E-13 2.1E-17 84.5 2.5 47 8-59 14-61 (72)
27 2ysj_A Tripartite motif-contai 99.3 1.6E-12 5.4E-17 80.3 4.2 43 8-54 19-63 (63)
28 3ztg_A E3 ubiquitin-protein li 99.3 1.1E-12 3.8E-17 86.7 3.5 48 7-58 11-60 (92)
29 3lrq_A E3 ubiquitin-protein li 99.3 1.5E-12 5E-17 88.0 3.2 47 9-59 22-69 (100)
30 3fl2_A E3 ubiquitin-protein li 99.3 1.6E-12 5.4E-17 90.6 3.5 48 9-60 52-99 (124)
31 2ecw_A Tripartite motif-contai 99.3 3.8E-12 1.3E-16 82.2 4.7 48 8-59 18-70 (85)
32 2ecn_A Ring finger protein 141 99.3 7.2E-13 2.5E-17 83.4 0.5 46 8-59 14-59 (70)
33 3hct_A TNF receptor-associated 99.2 5.5E-12 1.9E-16 87.3 4.9 49 8-60 17-65 (118)
34 2ecj_A Tripartite motif-contai 99.2 3.4E-12 1.1E-16 77.2 2.9 44 7-54 13-58 (58)
35 2egp_A Tripartite motif-contai 99.2 6.3E-13 2.2E-17 85.2 -0.5 49 7-59 10-64 (79)
36 4ap4_A E3 ubiquitin ligase RNF 99.2 2.7E-12 9.3E-17 89.1 2.6 53 6-59 4-59 (133)
37 2ecv_A Tripartite motif-contai 99.2 4.1E-12 1.4E-16 82.0 2.5 49 7-59 17-70 (85)
38 2ckl_A Polycomb group ring fin 99.2 6.1E-12 2.1E-16 85.7 3.0 48 8-60 14-62 (108)
39 3l11_A E3 ubiquitin-protein li 99.2 1.9E-12 6.6E-17 89.0 0.1 47 9-59 15-61 (115)
40 1z6u_A NP95-like ring finger p 99.2 9.2E-12 3.1E-16 90.1 3.5 48 9-60 78-125 (150)
41 2y43_A E3 ubiquitin-protein li 99.2 9.5E-12 3.2E-16 83.4 3.2 46 9-59 22-68 (99)
42 4a0k_B E3 ubiquitin-protein li 99.2 3.8E-12 1.3E-16 89.0 0.3 53 5-58 44-110 (117)
43 1rmd_A RAG1; V(D)J recombinati 99.2 1.6E-11 5.5E-16 84.4 3.4 48 9-60 23-70 (116)
44 2ckl_B Ubiquitin ligase protei 99.1 1.6E-11 5.4E-16 89.4 3.5 46 10-59 55-101 (165)
45 2kr4_A Ubiquitin conjugation f 99.1 2E-11 6.7E-16 80.4 3.3 47 8-59 13-59 (85)
46 2d8s_A Cellular modulator of i 99.1 2.5E-11 8.6E-16 79.4 3.3 52 6-59 12-69 (80)
47 1jm7_A BRCA1, breast cancer ty 99.1 1.7E-11 5.7E-16 83.4 2.0 47 9-59 21-69 (112)
48 2kre_A Ubiquitin conjugation f 99.1 3.1E-11 1.1E-15 81.9 3.3 47 8-59 28-74 (100)
49 4ap4_A E3 ubiquitin ligase RNF 99.1 2.9E-11 1E-15 83.8 2.6 54 6-60 69-125 (133)
50 3knv_A TNF receptor-associated 99.1 9.7E-12 3.3E-16 89.1 0.2 47 8-58 30-76 (141)
51 1wgm_A Ubiquitin conjugation f 99.1 6.4E-11 2.2E-15 80.1 3.1 47 8-59 21-68 (98)
52 2c2l_A CHIP, carboxy terminus 99.0 1.3E-10 4.4E-15 89.6 4.4 48 8-59 207-254 (281)
53 2vje_A E3 ubiquitin-protein li 99.0 9.1E-11 3.1E-15 73.3 2.4 48 8-60 7-57 (64)
54 2yu4_A E3 SUMO-protein ligase 99.0 2.8E-10 9.7E-15 76.0 5.0 46 8-57 6-59 (94)
55 3hcs_A TNF receptor-associated 99.0 1E-10 3.4E-15 85.4 2.7 49 8-60 17-65 (170)
56 4ic3_A E3 ubiquitin-protein li 99.0 4.9E-11 1.7E-15 76.4 0.4 43 9-60 24-67 (74)
57 2vje_B MDM4 protein; proto-onc 99.0 1.3E-10 4.5E-15 72.3 2.3 50 6-60 4-56 (63)
58 1bor_A Transcription factor PM 99.0 2.8E-11 9.4E-16 73.6 -0.8 45 7-59 4-48 (56)
59 1jm7_B BARD1, BRCA1-associated 99.0 4.4E-11 1.5E-15 82.6 -1.1 44 9-59 22-66 (117)
60 2y1n_A E3 ubiquitin-protein li 98.9 4.4E-10 1.5E-14 92.5 3.8 47 9-59 332-378 (389)
61 2f42_A STIP1 homology and U-bo 98.9 1.3E-09 4.5E-14 81.2 4.7 48 8-59 105-152 (179)
62 2ea5_A Cell growth regulator w 98.8 1.3E-09 4.5E-14 68.9 2.8 48 4-60 10-58 (68)
63 1wim_A KIAA0161 protein; ring 98.8 3.4E-09 1.2E-13 70.4 4.3 49 8-57 4-61 (94)
64 2ecg_A Baculoviral IAP repeat- 98.8 1.1E-09 3.6E-14 70.1 1.2 42 10-60 26-68 (75)
65 2yho_A E3 ubiquitin-protein li 98.8 8.5E-10 2.9E-14 71.6 0.0 43 9-60 18-61 (79)
66 2ct0_A Non-SMC element 1 homol 98.7 6.9E-09 2.4E-13 66.9 3.2 47 9-58 15-62 (74)
67 3htk_C E3 SUMO-protein ligase 98.6 1.4E-08 4.8E-13 79.6 2.4 47 9-59 181-231 (267)
68 3t6p_A Baculoviral IAP repeat- 98.5 1.7E-08 6E-13 81.8 -0.1 42 9-59 295-337 (345)
69 1vyx_A ORF K3, K3RING; zinc-bi 98.4 7.6E-08 2.6E-12 59.4 2.2 47 8-58 5-57 (60)
70 2bay_A PRE-mRNA splicing facto 98.3 1.9E-07 6.6E-12 57.7 2.4 46 9-59 3-49 (61)
71 3k1l_B Fancl; UBC, ring, RWD, 98.3 1E-07 3.4E-12 77.6 0.1 51 9-59 308-372 (381)
72 3vk6_A E3 ubiquitin-protein li 98.1 1.2E-06 4.3E-11 59.2 2.4 49 11-62 3-51 (101)
73 3nw0_A Non-structural maintena 97.1 0.00018 6.1E-09 55.4 2.3 47 9-58 180-227 (238)
74 2jun_A Midline-1; B-BOX, TRIM, 95.6 0.0067 2.3E-07 39.8 2.6 33 8-43 2-36 (101)
75 2ko5_A Ring finger protein Z; 95.1 0.0067 2.3E-07 40.5 1.3 46 8-60 27-73 (99)
76 2kdx_A HYPA, hydrogenase/ureas 92.1 0.06 2.1E-06 36.7 1.7 37 85-123 71-108 (119)
77 2lri_C Autoimmune regulator; Z 89.8 0.1 3.5E-06 32.2 1.1 47 7-57 10-59 (66)
78 1weo_A Cellulose synthase, cat 89.3 0.44 1.5E-05 31.3 3.8 52 7-58 14-68 (93)
79 3a43_A HYPD, hydrogenase nicke 87.3 0.28 9.5E-06 34.4 2.0 39 85-123 68-125 (139)
80 2ysm_A Myeloid/lymphoid or mix 85.6 0.26 8.9E-06 32.9 1.1 48 6-55 4-55 (111)
81 2lbm_A Transcriptional regulat 84.7 1.7 5.7E-05 30.7 5.0 47 6-57 60-117 (142)
82 2cs3_A Protein C14ORF4, MY039 84.1 0.47 1.6E-05 30.7 1.7 36 7-46 13-52 (93)
83 2l5u_A Chromodomain-helicase-D 80.0 0.47 1.6E-05 28.5 0.6 43 8-56 10-57 (61)
84 1f62_A Transcription factor WS 79.9 0.43 1.5E-05 27.3 0.3 43 11-56 2-49 (51)
85 3i2d_A E3 SUMO-protein ligase 78.1 1.6 5.4E-05 35.5 3.3 47 10-59 250-299 (371)
86 4fo9_A E3 SUMO-protein ligase 76.4 1.9 6.4E-05 35.0 3.3 47 10-59 216-265 (360)
87 1wil_A KIAA1045 protein; ring 75.8 1.1 3.8E-05 29.1 1.4 34 5-43 11-47 (89)
88 2k16_A Transcription initiatio 74.9 0.34 1.2E-05 30.0 -1.2 46 10-58 19-69 (75)
89 2yt5_A Metal-response element- 72.7 0.79 2.7E-05 27.5 0.1 49 7-56 4-60 (66)
90 3mjh_B Early endosome antigen 72.4 2 6.9E-05 23.0 1.7 16 48-63 5-20 (34)
91 3m62_A Ubiquitin conjugation f 71.8 2 7E-05 39.0 2.6 46 9-59 891-937 (968)
92 1mm2_A MI2-beta; PHD, zinc fin 67.9 0.29 9.8E-06 29.5 -2.6 48 6-57 6-56 (61)
93 2g45_A Ubiquitin carboxyl-term 67.8 0.8 2.7E-05 31.8 -0.7 25 88-115 35-61 (129)
94 2ku3_A Bromodomain-containing 66.9 3.8 0.00013 25.3 2.4 49 6-55 13-64 (71)
95 1we9_A PHD finger family prote 66.5 0.41 1.4E-05 28.7 -2.1 48 8-56 5-57 (64)
96 3lqh_A Histone-lysine N-methyl 65.5 0.91 3.1E-05 33.3 -0.8 50 9-59 2-65 (183)
97 2jvx_A NF-kappa-B essential mo 65.5 3.6 0.00012 21.1 1.7 16 48-63 3-18 (28)
98 2puy_A PHD finger protein 21A; 65.3 0.17 5.7E-06 30.3 -4.1 45 7-56 3-51 (60)
99 4gne_A Histone-lysine N-methyl 65.2 3 0.0001 27.9 1.8 42 6-54 12-59 (107)
100 3u5n_A E3 ubiquitin-protein li 64.7 0.72 2.5E-05 34.0 -1.5 46 6-57 4-54 (207)
101 3o36_A Transcription intermedi 64.6 0.54 1.8E-05 34.0 -2.2 45 8-57 3-51 (184)
102 2l43_A N-teminal domain from h 63.6 5.8 0.0002 25.4 2.9 48 8-56 24-74 (88)
103 2e6s_A E3 ubiquitin-protein li 61.5 1.1 3.6E-05 28.3 -1.0 46 8-56 25-76 (77)
104 3v43_A Histone acetyltransfera 61.0 9.1 0.00031 25.3 3.6 48 7-55 3-62 (112)
105 2e6r_A Jumonji/ARID domain-con 59.2 0.35 1.2E-05 31.5 -3.7 47 6-55 13-64 (92)
106 2k5c_A Uncharacterized protein 58.7 1.4 4.9E-05 28.5 -0.7 10 49-58 9-18 (95)
107 2yql_A PHD finger protein 21A; 58.5 0.31 1.1E-05 28.7 -3.7 45 6-55 6-54 (56)
108 2d8v_A Zinc finger FYVE domain 58.2 2.2 7.6E-05 26.3 0.1 30 9-43 8-38 (67)
109 1wep_A PHF8; structural genomi 57.8 7.4 0.00025 24.1 2.6 49 8-58 11-64 (79)
110 1fp0_A KAP-1 corepressor; PHD 57.3 1.4 4.8E-05 28.6 -0.9 47 6-57 22-72 (88)
111 2ee8_A Protein ODD-skipped-rel 56.1 23 0.0008 21.6 4.9 15 48-62 45-59 (106)
112 1zbd_B Rabphilin-3A; G protein 55.7 1.9 6.4E-05 30.0 -0.6 51 7-57 53-107 (134)
113 3shb_A E3 ubiquitin-protein li 55.6 0.94 3.2E-05 28.6 -2.0 43 11-56 28-76 (77)
114 3ql9_A Transcriptional regulat 53.8 9.9 0.00034 26.2 2.9 46 7-57 55-111 (129)
115 1xwh_A Autoimmune regulator; P 53.7 0.43 1.5E-05 29.0 -3.7 44 7-55 6-53 (66)
116 2lv9_A Histone-lysine N-methyl 53.0 4.4 0.00015 26.4 0.9 45 10-58 29-77 (98)
117 2ro1_A Transcription intermedi 52.0 0.92 3.1E-05 33.2 -2.8 46 8-57 1-49 (189)
118 3asl_A E3 ubiquitin-protein li 51.0 1.5 5.1E-05 27.0 -1.6 43 11-56 20-68 (70)
119 1wev_A Riken cDNA 1110020M19; 50.8 3 0.0001 26.7 -0.2 48 9-57 16-72 (88)
120 1g47_A Pinch protein; LIM doma 50.3 7.7 0.00026 23.2 1.7 41 8-59 10-50 (77)
121 1vfy_A Phosphatidylinositol-3- 49.9 5.1 0.00017 24.6 0.8 34 7-41 9-43 (73)
122 3ihp_A Ubiquitin carboxyl-term 49.8 2.9 0.0001 37.2 -0.5 66 29-114 174-241 (854)
123 1wem_A Death associated transc 49.5 3 0.0001 25.7 -0.4 45 9-57 16-70 (76)
124 1wen_A Inhibitor of growth fam 49.3 5.2 0.00018 24.6 0.8 42 9-57 16-65 (71)
125 2kmk_A Zinc finger protein GFI 49.3 24 0.00081 20.3 3.9 16 48-63 29-44 (82)
126 2kwj_A Zinc finger protein DPF 48.6 4.5 0.00015 27.0 0.4 45 10-54 2-58 (114)
127 3zyq_A Hepatocyte growth facto 47.8 5.3 0.00018 29.8 0.8 37 3-41 159-196 (226)
128 1x4k_A Skeletal muscle LIM-pro 46.8 6.2 0.00021 23.3 0.9 39 10-59 6-44 (72)
129 1y02_A CARP2, FYVE-ring finger 46.7 4.6 0.00016 27.6 0.2 51 3-55 13-64 (120)
130 1wfp_A Zinc finger (AN1-like) 45.9 16 0.00055 22.9 2.7 33 86-123 24-57 (74)
131 1x61_A Thyroid receptor intera 45.8 7.5 0.00026 22.9 1.1 39 9-58 5-43 (72)
132 1znf_A 31ST zinc finger from X 45.6 13 0.00043 16.4 1.8 13 49-61 2-14 (27)
133 3v2d_5 50S ribosomal protein L 45.1 6.8 0.00023 23.5 0.8 29 86-119 29-57 (60)
134 1dvp_A HRS, hepatocyte growth 44.1 6 0.0002 29.2 0.5 32 8-40 160-192 (220)
135 2gmg_A Hypothetical protein PF 43.2 12 0.0004 25.1 1.8 33 85-118 65-97 (105)
136 1wfk_A Zinc finger, FYVE domai 42.8 7.9 0.00027 24.7 0.9 36 6-42 6-42 (88)
137 2dlq_A GLI-kruppel family memb 42.7 52 0.0018 20.3 5.0 86 8-112 6-101 (124)
138 2xqn_T Testin, TESS; metal-bin 41.5 21 0.00071 23.4 3.0 43 11-59 32-74 (126)
139 3t7l_A Zinc finger FYVE domain 41.4 5.4 0.00019 25.5 -0.0 33 10-43 21-54 (90)
140 2cu8_A Cysteine-rich protein 2 40.1 7.2 0.00025 23.4 0.4 40 8-59 8-47 (76)
141 1ard_A Yeast transcription fac 39.5 17 0.00058 16.1 1.7 14 49-62 3-16 (29)
142 1p7a_A BF3, BKLF, kruppel-like 39.3 17 0.00057 17.5 1.7 15 48-62 11-25 (37)
143 2dj7_A Actin-binding LIM prote 39.1 11 0.00037 23.1 1.1 40 8-59 14-53 (80)
144 2ctd_A Zinc finger protein 512 38.6 55 0.0019 20.2 4.6 41 47-99 33-74 (96)
145 3uk3_C Zinc finger protein 217 38.1 42 0.0014 17.7 3.5 14 48-61 4-17 (57)
146 2dar_A PDZ and LIM domain prot 37.5 13 0.00045 23.0 1.3 38 9-59 25-62 (90)
147 1x68_A FHL5 protein; four-and- 37.2 12 0.00041 22.4 1.1 41 10-59 6-46 (76)
148 2kgg_A Histone demethylase jar 37.0 13 0.00045 21.1 1.2 44 11-55 4-52 (52)
149 1klr_A Zinc finger Y-chromosom 36.7 18 0.00061 16.1 1.5 14 49-62 3-16 (30)
150 1z2q_A LM5-1; membrane protein 36.6 9.6 0.00033 23.9 0.6 31 10-41 22-53 (84)
151 2m0e_A Zinc finger and BTB dom 36.6 19 0.00065 15.8 1.6 13 49-61 3-15 (29)
152 2e5r_A Dystrobrevin alpha; ZZ 36.2 15 0.00052 21.9 1.4 29 87-118 11-39 (63)
153 1joc_A EEA1, early endosomal a 36.0 9.4 0.00032 25.9 0.5 30 10-40 70-100 (125)
154 2kvh_A Zinc finger and BTB dom 35.8 15 0.0005 16.3 1.1 15 48-62 3-17 (27)
155 2kvf_A Zinc finger and BTB dom 35.8 14 0.00049 16.4 1.0 14 48-61 3-16 (28)
156 4gzn_C ZFP-57, zinc finger pro 35.7 30 0.001 19.9 2.7 13 49-61 5-17 (60)
157 1iml_A CRIP, cysteine rich int 35.5 9.7 0.00033 22.8 0.4 37 11-59 2-38 (76)
158 1x63_A Skeletal muscle LIM-pro 35.0 9.7 0.00033 23.0 0.4 39 10-59 16-54 (82)
159 2l3k_A Rhombotin-2, linker, LI 34.8 13 0.00043 24.7 0.9 38 10-58 9-46 (123)
160 2jmo_A Parkin; IBR, E3 ligase, 34.7 1.9 6.6E-05 27.1 -3.0 14 30-43 55-68 (80)
161 1bbo_A Human enhancer-binding 34.6 35 0.0012 18.1 2.8 12 49-60 2-13 (57)
162 1wfh_A Zinc finger (AN1-like) 34.5 30 0.001 21.0 2.5 34 87-125 15-49 (64)
163 2elr_A Zinc finger protein 406 34.5 22 0.00075 16.9 1.7 15 48-62 9-23 (36)
164 3f6q_B LIM and senescent cell 34.4 15 0.0005 21.3 1.2 41 8-59 10-50 (72)
165 2co8_A NEDD9 interacting prote 34.3 12 0.00042 22.9 0.8 40 8-59 14-53 (82)
166 1twf_L ABC10-alpha, DNA-direct 34.1 18 0.00062 22.2 1.5 28 85-113 26-53 (70)
167 1x4l_A Skeletal muscle LIM-pro 34.0 12 0.0004 22.1 0.6 42 9-59 5-46 (72)
168 1paa_A Yeast transcription fac 33.9 21 0.00071 16.0 1.5 13 49-61 3-15 (30)
169 1weu_A Inhibitor of growth fam 33.9 7.2 0.00025 25.3 -0.4 41 10-57 37-85 (91)
170 2ri7_A Nucleosome-remodeling f 33.4 6.1 0.00021 27.9 -0.9 48 8-57 7-59 (174)
171 2apo_B Ribosome biogenesis pro 33.4 22 0.00074 21.3 1.8 21 88-114 7-27 (60)
172 2zjr_Z 50S ribosomal protein L 33.2 18 0.00063 21.5 1.4 29 86-119 29-57 (60)
173 1x4u_A Zinc finger, FYVE domai 33.1 13 0.00044 23.2 0.8 30 10-40 15-45 (84)
174 3ask_A E3 ubiquitin-protein li 32.7 5 0.00017 30.4 -1.5 43 11-56 176-224 (226)
175 2yw8_A RUN and FYVE domain-con 32.4 11 0.00039 23.4 0.4 31 10-41 20-51 (82)
176 2m0f_A Zinc finger and BTB dom 32.3 19 0.00066 15.8 1.2 13 49-61 3-15 (29)
177 2zet_C Melanophilin; complex, 32.3 7 0.00024 27.7 -0.7 49 8-57 67-117 (153)
178 1x4w_A Hypothetical protein FL 32.2 40 0.0014 20.6 2.8 35 85-121 13-48 (67)
179 3o70_A PHD finger protein 13; 32.2 2.2 7.7E-05 26.0 -2.9 44 9-56 19-66 (68)
180 1wyh_A SLIM 2, skeletal muscle 32.1 16 0.00054 21.4 1.0 40 9-59 5-44 (72)
181 1wg2_A Zinc finger (AN1-like) 32.1 26 0.0009 21.2 2.0 33 87-124 15-48 (64)
182 3j20_Y 30S ribosomal protein S 32.0 14 0.00048 21.1 0.7 25 88-112 20-44 (50)
183 1rim_A E6APC2 peptide; E6-bind 31.8 27 0.00092 16.6 1.8 15 49-63 3-17 (33)
184 2d8z_A Four and A half LIM dom 31.6 16 0.00053 21.3 0.9 36 10-58 6-41 (70)
185 2l4z_A DNA endonuclease RBBP8, 31.6 14 0.00049 24.6 0.8 38 10-59 62-99 (123)
186 1x62_A C-terminal LIM domain p 31.4 13 0.00045 22.4 0.6 37 9-58 15-51 (79)
187 1rik_A E6APC1 peptide; E6-bind 31.2 16 0.00056 16.2 0.8 13 49-61 3-15 (29)
188 2elx_A Zinc finger protein 406 31.1 19 0.00064 16.9 1.1 15 48-62 7-21 (35)
189 2lvu_A Zinc finger and BTB dom 37.0 10 0.00036 16.7 0.0 12 49-60 3-14 (26)
190 1wfl_A Zinc finger protein 216 30.5 36 0.0012 21.2 2.5 31 87-122 25-56 (74)
191 2kvg_A Zinc finger and BTB dom 30.1 13 0.00045 16.7 0.3 14 48-61 3-16 (27)
192 2yte_A Zinc finger protein 473 29.7 29 0.00098 17.2 1.7 16 48-63 10-25 (42)
193 3c6w_A P28ING5, inhibitor of g 29.7 3.7 0.00013 24.3 -2.2 41 9-56 9-57 (59)
194 3h0g_L DNA-directed RNA polyme 29.5 28 0.00096 21.0 1.8 27 86-113 20-46 (63)
195 2xb1_A Pygopus homolog 2, B-ce 29.5 2.4 8E-05 28.2 -3.4 49 9-58 3-62 (105)
196 1zfo_A LAsp-1; LIM domain, zin 28.8 21 0.00074 18.0 1.0 13 49-61 4-16 (31)
197 2eos_A B-cell lymphoma 6 prote 28.8 32 0.0011 17.1 1.8 15 48-62 11-25 (42)
198 2ytb_A Zinc finger protein 32; 28.7 27 0.00093 17.2 1.5 15 48-62 11-25 (42)
199 2m0d_A Zinc finger and BTB dom 28.7 21 0.00073 15.8 1.0 15 48-62 3-17 (30)
200 2d8x_A Protein pinch; LIM doma 28.6 16 0.00055 21.3 0.6 38 9-59 5-42 (70)
201 1x5w_A Zinc finger protein 64, 28.5 36 0.0012 19.1 2.2 18 48-65 37-54 (70)
202 2els_A Zinc finger protein 406 28.5 21 0.00073 17.0 1.0 15 48-62 9-23 (36)
203 2eon_A ZFP-95, zinc finger pro 28.2 32 0.0011 17.6 1.8 15 48-62 12-26 (46)
204 2kpi_A Uncharacterized protein 27.8 32 0.0011 20.0 1.8 13 7-19 8-20 (56)
205 2lcq_A Putative toxin VAPC6; P 27.7 23 0.00078 24.6 1.4 26 87-114 132-157 (165)
206 2elt_A Zinc finger protein 406 27.6 24 0.0008 16.7 1.1 15 48-62 9-23 (36)
207 2egq_A FHL1 protein; LIM domai 27.4 22 0.00076 21.0 1.1 41 10-59 16-57 (77)
208 4ayb_P DNA-directed RNA polyme 27.1 2.8 9.6E-05 24.2 -2.9 12 48-59 23-34 (48)
209 2enf_A Zinc finger protein 347 27.1 34 0.0012 17.3 1.8 15 48-62 12-26 (46)
210 3c5k_A HD6, histone deacetylas 27.0 21 0.00073 23.6 1.0 29 87-118 24-54 (109)
211 2lvt_A Zinc finger and BTB dom 33.0 13 0.00046 16.7 0.0 12 49-60 3-14 (29)
212 3kqi_A GRC5, PHD finger protei 27.0 9 0.00031 23.5 -0.8 50 6-57 7-61 (75)
213 1a7i_A QCRP2 (LIM1); LIM domai 26.9 10 0.00034 23.0 -0.6 40 8-59 6-45 (81)
214 2lce_A B-cell lymphoma 6 prote 26.9 60 0.0021 18.3 3.0 14 48-61 17-30 (74)
215 2epr_A POZ-, at HOOK-, and zin 26.9 23 0.0008 18.4 1.0 15 48-62 12-26 (48)
216 3lcz_A YCZA, inhibitor of trap 26.7 29 0.00099 20.0 1.5 24 87-114 9-32 (53)
217 2yti_A Zinc finger protein 347 26.6 35 0.0012 17.3 1.8 15 48-62 12-26 (46)
218 2elq_A Zinc finger protein 406 26.4 25 0.00085 16.8 1.1 15 48-62 9-23 (36)
219 2jne_A Hypothetical protein YF 26.4 17 0.0006 24.0 0.5 41 8-58 31-71 (101)
220 1x6e_A Zinc finger protein 24; 26.4 43 0.0015 18.9 2.3 13 48-60 14-26 (72)
221 2eq2_A Zinc finger protein 347 26.3 36 0.0012 17.2 1.8 16 48-63 12-27 (46)
222 2dip_A Zinc finger SWIM domain 26.3 27 0.00094 22.7 1.4 29 85-116 29-57 (98)
223 2elv_A Zinc finger protein 406 26.2 26 0.00088 16.7 1.1 15 48-62 9-23 (36)
224 2a20_A Regulating synaptic mem 26.1 18 0.00063 21.7 0.5 20 2-21 2-21 (62)
225 2eoh_A Zinc finger protein 28 25.8 37 0.0013 17.2 1.8 16 48-63 12-27 (46)
226 2ct7_A Ring finger protein 31; 25.8 2.7 9.2E-05 26.6 -3.6 32 12-43 28-61 (86)
227 2eoq_A Zinc finger protein 224 25.8 37 0.0013 17.2 1.8 16 48-63 12-27 (46)
228 1srk_A Zinc finger protein ZFP 25.7 27 0.00092 16.4 1.1 15 48-62 7-21 (35)
229 2emz_A ZFP-95, zinc finger pro 25.5 73 0.0025 16.0 3.3 16 48-63 12-27 (46)
230 2en7_A Zinc finger protein 268 25.5 38 0.0013 16.9 1.7 15 48-62 12-26 (44)
231 1nyp_A Pinch protein; LIM doma 25.5 14 0.00047 21.3 -0.1 38 9-59 5-42 (66)
232 2cur_A Skeletal muscle LIM-pro 25.4 15 0.00051 21.4 -0.0 38 9-59 5-42 (69)
233 2emg_A Zinc finger protein 484 25.4 37 0.0013 17.2 1.7 15 48-62 12-26 (46)
234 2yth_A Zinc finger protein 224 25.4 39 0.0013 17.2 1.8 16 48-63 12-27 (46)
235 2kfq_A FP1; protein, de novo p 25.4 26 0.00087 16.5 0.9 12 49-60 3-14 (32)
236 2epx_A Zinc finger protein 28 25.2 39 0.0013 17.1 1.8 16 48-63 12-27 (47)
237 2eov_A Zinc finger protein 484 25.1 39 0.0013 17.0 1.8 16 48-63 12-27 (46)
238 2vnf_A ING 4, P29ING4, inhibit 25.0 4.7 0.00016 23.9 -2.3 40 10-56 11-58 (60)
239 1pft_A TFIIB, PFTFIIBN; N-term 24.8 36 0.0012 18.8 1.6 14 106-119 25-39 (50)
240 2em6_A Zinc finger protein 224 24.7 40 0.0014 17.1 1.8 15 48-62 12-26 (46)
241 1x64_A Alpha-actinin-2 associa 24.7 22 0.00074 21.9 0.7 37 10-59 26-62 (89)
242 2ytm_A Zinc finger protein 28 24.6 74 0.0025 16.0 2.9 16 48-63 12-27 (46)
243 2ytr_A Zinc finger protein 347 24.6 39 0.0013 17.0 1.7 15 48-62 12-26 (46)
244 2eom_A ZFP-95, zinc finger pro 24.6 41 0.0014 17.1 1.8 16 48-63 12-27 (46)
245 2em0_A Zinc finger protein 224 24.4 41 0.0014 17.0 1.8 16 48-63 12-27 (46)
246 2elo_A Zinc finger protein 406 24.2 24 0.00081 16.9 0.7 15 48-62 9-23 (37)
247 2lvr_A Zinc finger and BTB dom 30.0 16 0.00055 16.4 0.0 12 49-60 4-15 (30)
248 2emk_A Zinc finger protein 28 24.1 41 0.0014 17.1 1.7 17 48-64 12-28 (46)
249 2en9_A Zinc finger protein 28 24.1 41 0.0014 17.1 1.7 16 48-63 12-27 (46)
250 2eop_A Zinc finger protein 268 24.0 41 0.0014 17.0 1.7 15 48-62 12-26 (46)
251 2eou_A Zinc finger protein 473 23.9 77 0.0026 15.7 2.9 16 48-63 12-27 (44)
252 2d8y_A Eplin protein; LIM doma 23.7 26 0.00088 21.6 0.9 39 9-59 15-53 (91)
253 2dlo_A Thyroid receptor-intera 23.6 16 0.00056 22.0 -0.1 39 8-59 14-52 (81)
254 2epz_A Zinc finger protein 28 23.6 43 0.0015 16.9 1.7 15 48-62 12-26 (46)
255 2ytn_A Zinc finger protein 347 23.5 42 0.0014 16.9 1.7 15 48-62 12-26 (46)
256 2ep1_A Zinc finger protein 484 23.4 45 0.0015 16.8 1.8 15 48-62 12-26 (46)
257 2ytq_A Zinc finger protein 268 23.3 43 0.0015 17.0 1.7 15 48-62 12-26 (46)
258 2eq1_A Zinc finger protein 347 23.3 43 0.0015 16.9 1.7 15 48-62 12-26 (46)
259 2elz_A Zinc finger protein 224 23.3 44 0.0015 16.9 1.8 15 48-62 12-26 (46)
260 1z60_A TFIIH basal transcripti 23.2 19 0.00067 21.4 0.2 42 11-54 17-58 (59)
261 2enh_A Zinc finger protein 28 23.2 38 0.0013 17.2 1.5 15 48-62 12-26 (46)
262 2epc_A Zinc finger protein 32; 23.2 31 0.0011 17.0 1.1 16 48-63 11-26 (42)
263 2elm_A Zinc finger protein 406 23.1 31 0.0011 16.7 1.0 15 48-62 9-23 (37)
264 1wig_A KIAA1808 protein; LIM d 23.1 18 0.0006 21.6 0.0 37 10-59 6-42 (73)
265 2ely_A Zinc finger protein 224 22.9 40 0.0014 17.1 1.5 16 48-63 12-27 (46)
266 2jrp_A Putative cytoplasmic pr 22.9 22 0.00074 22.6 0.4 40 9-58 2-41 (81)
267 1j2o_A FLIN2, fusion of rhombo 22.6 39 0.0013 21.8 1.7 39 9-59 3-41 (114)
268 2yts_A Zinc finger protein 484 22.5 33 0.0011 17.4 1.1 16 48-63 12-27 (46)
269 2fc7_A ZZZ3 protein; structure 22.3 32 0.0011 21.6 1.1 31 85-118 19-52 (82)
270 2ytt_A Zinc finger protein 473 22.2 87 0.003 15.7 3.0 16 48-63 12-27 (46)
271 2el5_A Zinc finger protein 268 22.1 34 0.0012 16.9 1.1 15 48-62 10-24 (42)
272 2en2_A B-cell lymphoma 6 prote 22.1 62 0.0021 15.8 2.2 16 48-63 11-26 (42)
273 2elp_A Zinc finger protein 406 22.0 31 0.001 16.5 0.9 14 48-61 9-22 (37)
274 2cup_A Skeletal muscle LIM-pro 21.8 28 0.00097 21.7 0.8 40 9-59 5-44 (101)
275 2ept_A Zinc finger protein 32; 21.7 35 0.0012 16.8 1.1 15 48-62 10-24 (41)
276 2xjy_A Rhombotin-2; oncoprotei 21.6 57 0.0019 21.2 2.4 27 31-58 50-76 (131)
277 2emi_A Zinc finger protein 484 21.6 35 0.0012 17.3 1.1 15 48-62 12-26 (46)
278 2ene_A Zinc finger protein 347 21.6 35 0.0012 17.3 1.1 15 48-62 12-26 (46)
279 2eow_A Zinc finger protein 347 21.4 35 0.0012 17.3 1.0 17 48-64 12-28 (46)
280 2em8_A Zinc finger protein 224 21.4 73 0.0025 16.0 2.4 16 48-63 12-27 (46)
281 2aus_D NOP10, ribosome biogene 21.3 46 0.0016 19.9 1.6 7 107-113 19-25 (60)
282 2eor_A Zinc finger protein 224 21.3 72 0.0025 15.9 2.4 16 48-63 12-27 (46)
283 2emj_A Zinc finger protein 28 21.3 36 0.0012 17.3 1.1 16 48-63 12-27 (46)
284 2ytf_A Zinc finger protein 268 21.2 36 0.0012 17.2 1.1 16 48-63 12-27 (46)
285 2em7_A Zinc finger protein 224 21.0 36 0.0012 17.3 1.0 15 48-62 12-26 (46)
286 2iyb_E Testin, TESS, TES; LIM 20.9 19 0.00066 20.8 -0.1 39 10-59 3-43 (65)
287 4gut_A Lysine-specific histone 20.9 1.1E+02 0.0039 26.6 4.7 37 10-46 14-56 (776)
288 2eq4_A Zinc finger protein 224 20.8 45 0.0015 16.8 1.4 16 48-63 12-27 (46)
289 1njq_A Superman protein; zinc- 20.8 36 0.0012 16.5 1.0 15 48-62 6-20 (39)
290 2em3_A Zinc finger protein 28 20.8 37 0.0013 17.2 1.1 17 48-64 12-28 (46)
291 2ehe_A Four and A half LIM dom 20.7 19 0.00064 21.7 -0.2 39 10-59 16-54 (82)
292 2em5_A ZFP-95, zinc finger pro 20.7 37 0.0013 17.2 1.1 15 48-62 12-26 (46)
293 2yrm_A B-cell lymphoma 6 prote 20.7 55 0.0019 16.3 1.8 16 48-63 10-25 (43)
294 1v6g_A Actin binding LIM prote 20.6 21 0.00072 21.5 -0.0 37 10-59 16-52 (81)
295 2ep3_A Zinc finger protein 484 20.5 38 0.0013 17.2 1.1 16 48-63 12-27 (46)
296 2cuq_A Four and A half LIM dom 20.5 25 0.00087 20.9 0.4 36 10-58 16-51 (80)
297 2eml_A Zinc finger protein 28 20.5 38 0.0013 17.2 1.1 15 48-62 12-26 (46)
298 3mpx_A FYVE, rhogef and PH dom 20.3 22 0.00074 28.3 0.0 32 10-42 376-408 (434)
299 1wd2_A Ariadne-1 protein homol 20.3 21 0.00073 21.0 -0.0 16 44-59 2-17 (60)
300 1fv5_A First zinc finger of U- 20.1 31 0.0011 17.8 0.6 15 48-62 8-22 (36)
301 2eme_A Zinc finger protein 473 20.1 39 0.0013 17.0 1.1 15 48-62 12-26 (46)
No 1
>2k2d_A Ring finger and CHY zinc finger domain- containing protein 1; zinc-binding protein, cytoplasm, metal-binding, nucleus, metal binding protein; NMR {Homo sapiens}
Probab=99.89 E-value=6.6e-25 Score=144.40 Aligned_cols=77 Identities=45% Similarity=0.795 Sum_probs=41.7
Q ss_pred CCCcccccchhhhHHHhhHHHHhcCCCChhhhcccccccCCCCCCCCccchhhhhhcCCCCCCcccccccCCCCCCC
Q 032682 51 CPVCSKSLWDMSKLWSKIDQEIASTPMPAMYQNKMVWILCNDCGANSHVQFHVIAHKCLSCKSYNTRQTRGDTATTC 127 (136)
Q Consensus 51 CP~Cr~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~i~C~~C~~~~~~~~h~~~~kC~~C~synt~~~~~~~~~~~ 127 (136)
||+|+|++.||+.+|+.||+++++++||++|++.++.|+|+||++++.+.|||+|+||+.|+||||++++|...+.+
T Consensus 1 ~~~c~ks~~dm~~~~~~lD~~ia~~pmP~~y~~~~v~I~CnDC~~~s~v~~h~lg~kC~~C~SyNTr~~~G~~~~~~ 77 (79)
T 2k2d_A 1 GSHMMHSALDMTRYWRQLDDEVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKCKICESYNTAQAGGRRISLD 77 (79)
T ss_dssp --------------------------------CCEEEEEESSSCCEEEEECCTTCCCCTTTSCCCEEESCCCCCCCC
T ss_pred CCcccccHHHHHHHHHHHHHHHHhCCCCHHHhCCEeEEECCCCCCCccCCceeecccCcCCCCcCeEecCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999998766554
No 2
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.51 E-value=5.5e-15 Score=88.96 Aligned_cols=51 Identities=33% Similarity=0.576 Sum_probs=43.4
Q ss_pred CCCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCccccc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSL 58 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~ 58 (136)
.++..|+||++.+.+....++.++|||.||..|+.+|+.. ..+||+||+.+
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~ 53 (55)
T 2ecm_A 3 SGSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKE-GYRCPLCSGPS 53 (55)
T ss_dssp SCCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHH-TCCCTTSCCSS
T ss_pred CCCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHc-CCcCCCCCCcC
Confidence 4568899999996555566788999999999999999985 48899999876
No 3
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.48 E-value=2.8e-14 Score=89.75 Aligned_cols=51 Identities=20% Similarity=0.444 Sum_probs=42.8
Q ss_pred CCCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
..+..|+||++. +.....++.++|||.||..|+.+|+.. +.+||+||+.+.
T Consensus 12 ~~~~~C~IC~~~-~~~~~~~~~~~C~H~fc~~Ci~~~~~~-~~~CP~Cr~~~~ 62 (69)
T 2kiz_A 12 DTEEKCTICLSI-LEEGEDVRRLPCMHLFHQVCVDQWLIT-NKKCPICRVDIE 62 (69)
T ss_dssp TCCCSBTTTTBC-CCSSSCEEECTTSCEEEHHHHHHHHHH-CSBCTTTCSBSC
T ss_pred CCCCCCeeCCcc-ccCCCcEEEeCCCCHHHHHHHHHHHHc-CCCCcCcCcccc
Confidence 345789999999 555567888999999999999999984 578999998874
No 4
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=2e-14 Score=91.62 Aligned_cols=51 Identities=22% Similarity=0.525 Sum_probs=43.0
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccch
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLWD 60 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~~ 60 (136)
.+..|+||++. |......+.|+|||.||..||.+|+.. +..||+||+.+..
T Consensus 14 ~~~~C~IC~~~-~~~~~~~~~~~C~H~f~~~Ci~~~~~~-~~~CP~Cr~~~~~ 64 (74)
T 2ep4_A 14 LHELCAVCLED-FKPRDELGICPCKHAFHRKCLIKWLEV-RKVCPLCNMPVLQ 64 (74)
T ss_dssp CSCBCSSSCCB-CCSSSCEEEETTTEEEEHHHHHHHHHH-CSBCTTTCCBCSS
T ss_pred CCCCCcCCCcc-cCCCCcEEEcCCCCEecHHHHHHHHHc-CCcCCCcCccccc
Confidence 35789999999 555566777899999999999999985 5689999998854
No 5
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=99.45 E-value=1.5e-14 Score=87.08 Aligned_cols=49 Identities=24% Similarity=0.495 Sum_probs=41.0
Q ss_pred CCCcceecCcCccCCccceEEec-CCcHhhHHHHHHHHhhcCCCCCCccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLR-CGHTIHLECLKEMEKHYRYTCPVCSKSL 58 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~-CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~ 58 (136)
++..|+||++. +.....++.++ |||.||..|+.+|+. .+.+||+||+.+
T Consensus 4 ~~~~C~IC~~~-~~~~~~~~~~~~C~H~f~~~Ci~~w~~-~~~~CP~Cr~~~ 53 (55)
T 1iym_A 4 DGVECAVCLAE-LEDGEEARFLPRCGHGFHAECVDMWLG-SHSTCPLCRLTV 53 (55)
T ss_dssp CSCCCTTTCCC-CCTTSCCEECSSSCCEECTTHHHHTTT-TCCSCSSSCCCS
T ss_pred CCCcCccCCcc-ccCCCceEECCCCCCcccHHHHHHHHH-cCCcCcCCCCEe
Confidence 55789999999 45445577786 999999999999987 467899999876
No 6
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=2.6e-14 Score=91.52 Aligned_cols=50 Identities=24% Similarity=0.525 Sum_probs=42.4
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
++..|+||++. |.....++.|+|||.||..|+.+|+.. +..||+||+.+.
T Consensus 22 ~~~~C~IC~~~-~~~~~~~~~l~C~H~fh~~Ci~~w~~~-~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 22 EQTLCVVCMCD-FESRQLLRVLPCNHEFHAKCVDKWLKA-NRTCPICRADSG 71 (75)
T ss_dssp SCCEETTTTEE-CCBTCEEEEETTTEEEETTHHHHHHHH-CSSCTTTCCCCC
T ss_pred CCCCCeECCcc-cCCCCeEEEECCCCHhHHHHHHHHHHc-CCcCcCcCCcCC
Confidence 45789999999 555556788999999999999999984 578999998874
No 7
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=6.1e-14 Score=91.61 Aligned_cols=54 Identities=20% Similarity=0.426 Sum_probs=41.6
Q ss_pred CCCCCCcceecCcCccC----------CccceEEe-cCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 5 LNVNDNFYNFGLQFIFD----------TMKDITVL-RCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 5 ~~~~~~~CpIC~e~lf~----------~~~~~~~L-~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
+++++..|+||++.+.+ ....++.+ +|||.||..||.+|+.. +.+||+||+.+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~-~~~CP~CR~~~~ 75 (81)
T 2ecl_A 11 WDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQ-NNRCPLCQQDWV 75 (81)
T ss_dssp CSCCCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTT-CCBCTTTCCBCC
T ss_pred ecCCCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHh-CCCCCCcCCCcc
Confidence 45678899999999522 12224455 59999999999999984 578999998863
No 8
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=99.42 E-value=7.5e-14 Score=92.87 Aligned_cols=50 Identities=22% Similarity=0.281 Sum_probs=41.9
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
.+..|+||++. |.....++.|+|||.||..||.+|+. .+..||+||+.+.
T Consensus 39 ~~~~C~IC~~~-~~~~~~~~~l~C~H~Fh~~Ci~~wl~-~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 39 QEMCCPICCSE-YVKGDVATELPCHHYFHKPCVSIWLQ-KSGTCPVCRCMFP 88 (91)
T ss_dssp SCSEETTTTEE-CCTTCEEEEETTTEEEEHHHHHHHHT-TTCBCTTTCCBSS
T ss_pred CCCCCcccChh-hcCCCcEEecCCCChHHHHHHHHHHH-cCCcCcCcCccCC
Confidence 44679999999 55455677899999999999999997 4678999998874
No 9
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.42 E-value=4.3e-14 Score=90.90 Aligned_cols=51 Identities=24% Similarity=0.363 Sum_probs=42.9
Q ss_pred CCCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
.++..|+||++. |.....++.|+|||.||..||.+|+. ...+||+||+.+.
T Consensus 13 ~~~~~C~IC~~~-~~~~~~~~~~~C~H~fc~~Ci~~~~~-~~~~CP~Cr~~~~ 63 (78)
T 2ect_A 13 GSGLECPVCKED-YALGESVRQLPCNHLFHDSCIVPWLE-QHDSCPVCRKSLT 63 (78)
T ss_dssp SSSCCCTTTTSC-CCTTSCEEECTTSCEEETTTTHHHHT-TTCSCTTTCCCCC
T ss_pred CCCCCCeeCCcc-ccCCCCEEEeCCCCeecHHHHHHHHH-cCCcCcCcCCccC
Confidence 356789999999 55556677789999999999999997 4578999998874
No 10
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.41 E-value=2.3e-13 Score=87.42 Aligned_cols=49 Identities=18% Similarity=0.273 Sum_probs=42.3
Q ss_pred CCCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
.++..||||++.| .++++++|||+||+.|+.+|+..+..+||+||+.+.
T Consensus 6 ~~~~~C~IC~~~~----~~Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 6 PEYFRCPISLELM----KDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLL 54 (78)
T ss_dssp SSSSSCTTTSCCC----SSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCS
T ss_pred cccCCCCCccccc----cCCEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCC
Confidence 3568999999994 567889999999999999999855788999998874
No 11
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.40 E-value=1.1e-13 Score=86.24 Aligned_cols=52 Identities=21% Similarity=0.287 Sum_probs=41.1
Q ss_pred CCCcceecCc-CccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQ-FIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e-~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
++..||||++ .+.+.....++++|||+||..|+.+|+..+...||+||+.+.
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 54 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLR 54 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCS
T ss_pred CCCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccc
Confidence 4678999999 643333333568999999999999998766678999998874
No 12
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=2.6e-13 Score=88.61 Aligned_cols=53 Identities=25% Similarity=0.401 Sum_probs=42.6
Q ss_pred CCCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhc--CCCCCCcccccc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHY--RYTCPVCSKSLW 59 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~--~~~CP~Cr~~~~ 59 (136)
.++..|+||++.+.+....++.++|||.||..|+.+|+... ...||+||+.+.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITR 67 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBC
T ss_pred cCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCccc
Confidence 35578999999953333348889999999999999999853 478999998874
No 13
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=1.4e-13 Score=86.04 Aligned_cols=52 Identities=23% Similarity=0.413 Sum_probs=41.1
Q ss_pred CCCCcceecCcCccCC---ccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 7 VNDNFYNFGLQFIFDT---MKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~---~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
.++..|+||++.+.+. ...++.++|||.||..|+++|+.. ...||+||+.+.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKIN 67 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH-CSSCTTTCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc-CCCCCCCCCccC
Confidence 4568899999995321 123377899999999999999984 678999998763
No 14
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=2.5e-13 Score=86.13 Aligned_cols=49 Identities=18% Similarity=0.283 Sum_probs=41.4
Q ss_pred CCCCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 6 NVNDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
..++..|+||++.+ .+++.++|||.||..|+.+|+. ....||+||+.+.
T Consensus 12 ~~~~~~C~IC~~~~----~~~~~~~CgH~fC~~Ci~~~~~-~~~~CP~Cr~~~~ 60 (71)
T 2d8t_A 12 SLTVPECAICLQTC----VHPVSLPCKHVFCYLCVKGASW-LGKRCALCRQEIP 60 (71)
T ss_dssp SSSCCBCSSSSSBC----SSEEEETTTEEEEHHHHHHCTT-CSSBCSSSCCBCC
T ss_pred CCCCCCCccCCccc----CCCEEccCCCHHHHHHHHHHHH-CCCcCcCcCchhC
Confidence 34567899999984 5577889999999999999987 4588999999874
No 15
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=1.7e-13 Score=85.64 Aligned_cols=49 Identities=14% Similarity=0.274 Sum_probs=40.6
Q ss_pred CCCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
.++..|+||++.+ .+++.++|||.||..|+.+|+......||+||+.+.
T Consensus 13 ~~~~~C~IC~~~~----~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 61 (66)
T 2ecy_A 13 EDKYKCEKCHLVL----CSPKQTECGHRFCESCMAALLSSSSPKCTACQESIV 61 (66)
T ss_dssp CCCEECTTTCCEE----SSCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCC
T ss_pred CcCCCCCCCChHh----cCeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCC
Confidence 3567899999994 345558999999999999999645678999998874
No 16
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=3.6e-13 Score=87.29 Aligned_cols=47 Identities=17% Similarity=0.187 Sum_probs=40.4
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
++..|+||++.+ .++++++|||+||..|+.+|+. ....||+||+.+.
T Consensus 14 ~~~~C~IC~~~~----~~p~~~~CgH~fC~~Ci~~~~~-~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 14 IPFRCFICRQAF----QNPVVTKCRHYFCESCALEHFR-ATPRCYICDQPTG 60 (81)
T ss_dssp CCSBCSSSCSBC----CSEEECTTSCEEEHHHHHHHHH-HCSBCSSSCCBCC
T ss_pred CCCCCcCCCchh----cCeeEccCCCHhHHHHHHHHHH-CCCcCCCcCcccc
Confidence 457899999994 4577799999999999999997 4688999999875
No 17
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.37 E-value=1.6e-13 Score=86.34 Aligned_cols=52 Identities=23% Similarity=0.413 Sum_probs=41.3
Q ss_pred CCCCcceecCcCccCC---ccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 7 VNDNFYNFGLQFIFDT---MKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~---~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
.++..|+||++.+.+. ...++.++|||.||..|+.+|+.. +.+||+||+.+.
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~ 62 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKIN 62 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHH-CSBCTTTCCBCC
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHc-CCCCCCCCCccC
Confidence 3568899999995221 133477899999999999999984 579999998874
No 18
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=99.36 E-value=2.5e-13 Score=83.66 Aligned_cols=51 Identities=24% Similarity=0.404 Sum_probs=41.0
Q ss_pred CCCcceecCcCccCC---ccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDT---MKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~---~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
++..|+||++.+.+. .+.++.++|||.||..|+.+|+.. +.+||+||+.+.
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~ 55 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKIN 55 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH-CSBCTTTCCBCT
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc-CCCCCCCCccCC
Confidence 567899999995221 133477899999999999999984 678999998874
No 19
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=99.36 E-value=3e-13 Score=92.73 Aligned_cols=52 Identities=19% Similarity=0.294 Sum_probs=39.7
Q ss_pred CCCcceecCcCccCCc--------------cceEEecCCcHhhHHHHHHHHhh----cCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTM--------------KDITVLRCGHTIHLECLKEMEKH----YRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~--------------~~~~~L~CgH~fh~~Cl~~~~~~----~~~~CP~Cr~~~~ 59 (136)
.+..|+||++.|.+.. ...++++|||.||..||.+|+.. ....||+||+.+.
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~ 93 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYG 93 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSS
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccC
Confidence 4568999999953211 23346799999999999999953 3568999998874
No 20
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=99.35 E-value=2.8e-13 Score=84.80 Aligned_cols=49 Identities=18% Similarity=0.312 Sum_probs=40.8
Q ss_pred CCCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
..+..|+||++.+ . .+++.++|||.||..|+.+|+.. +..||+||+.+.
T Consensus 3 ~~~~~C~IC~~~~-~--~~~~~~~C~H~fc~~Ci~~~~~~-~~~CP~Cr~~~~ 51 (68)
T 1chc_A 3 TVAERCPICLEDP-S--NYSMALPCLHAFCYVCITRWIRQ-NPTCPLCKVPVE 51 (68)
T ss_dssp CCCCCCSSCCSCC-C--SCEEETTTTEEESTTHHHHHHHH-SCSTTTTCCCCC
T ss_pred CCCCCCeeCCccc-c--CCcEecCCCCeeHHHHHHHHHhC-cCcCcCCChhhH
Confidence 4568899999994 2 33577899999999999999974 578999998875
No 21
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.35 E-value=1.6e-13 Score=87.83 Aligned_cols=49 Identities=20% Similarity=0.454 Sum_probs=40.4
Q ss_pred CCCcceecCcCccCCccceEEec-CCcHhhHHHHHHHHhhc-CCCCCCcccccch
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLR-CGHTIHLECLKEMEKHY-RYTCPVCSKSLWD 60 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~-CgH~fh~~Cl~~~~~~~-~~~CP~Cr~~~~~ 60 (136)
++..|+||++.+ .++++++ |||+||..||.+|+... ...||+||+.+..
T Consensus 14 ~~~~C~IC~~~~----~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~ 64 (74)
T 2yur_A 14 DELLCLICKDIM----TDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVS 64 (74)
T ss_dssp GGGSCSSSCCCC----TTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCC
T ss_pred CCCCCcCCChHH----hCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCC
Confidence 447899999994 4577799 99999999999999853 3689999987643
No 22
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=5.4e-13 Score=84.45 Aligned_cols=49 Identities=20% Similarity=0.615 Sum_probs=40.6
Q ss_pred CCCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhh--cCCCCCCcccccc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKH--YRYTCPVCSKSLW 59 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~--~~~~CP~Cr~~~~ 59 (136)
.++..|+||++.+ .+++.++|||.||..|+.+|+.. ....||+||+.+.
T Consensus 18 ~~~~~C~IC~~~~----~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 68 (73)
T 2ysl_A 18 QEEVICPICLDIL----QKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVR 68 (73)
T ss_dssp CCCCBCTTTCSBC----SSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCC
T ss_pred ccCCEeccCCccc----CCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCC
Confidence 3557899999984 46778899999999999999863 4568999998874
No 23
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=99.32 E-value=9e-13 Score=90.61 Aligned_cols=51 Identities=18% Similarity=0.365 Sum_probs=41.5
Q ss_pred CCCCCcceecCcCccCCc---------------cceEEecCCcHhhHHHHHHHHhhcCCCCCCccccc
Q 032682 6 NVNDNFYNFGLQFIFDTM---------------KDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSL 58 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~~---------------~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~ 58 (136)
++++..|+||++.+ +.. ..++.++|||.||..||.+|+. .+.+||+||+.+
T Consensus 34 d~~~d~CaIC~~~~-~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~-~~~~CP~Cr~~~ 99 (106)
T 3dpl_R 34 DIVVDNCAICRNHI-MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK-TRQVCPLDNREW 99 (106)
T ss_dssp SSCSCCCSSSCSCT-TSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHT-TCSBCSSSCSBC
T ss_pred CCCCCCCccCChhH-hCcCchhhccccccCCccceEeecccCcEECHHHHHHHHH-cCCcCcCCCCcc
Confidence 56788999999994 322 1356679999999999999998 468899999885
No 24
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=99.32 E-value=3.1e-13 Score=96.12 Aligned_cols=47 Identities=21% Similarity=0.519 Sum_probs=40.3
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccch
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLWD 60 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~~ 60 (136)
+..|+||++.+ .++++++|||+||..|+.+|+. ....||+||+.+..
T Consensus 53 ~~~C~iC~~~~----~~~~~~~CgH~fc~~Ci~~~~~-~~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 53 ELQCIICSEYF----IEAVTLNCAHSFCSYCINEWMK-RKIECPICRKDIKS 99 (138)
T ss_dssp HSBCTTTCSBC----SSEEEETTSCEEEHHHHHHHTT-TCSBCTTTCCBCCC
T ss_pred cCCCcccCccc----CCceECCCCCCccHHHHHHHHH-cCCcCCCCCCcCCC
Confidence 46799999994 4678899999999999999987 46789999998853
No 25
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=99.32 E-value=1.1e-13 Score=90.17 Aligned_cols=54 Identities=19% Similarity=0.377 Sum_probs=41.8
Q ss_pred CCCCcceecCcCccCCccceEEec--CCcHhhHHHHHHHHhhcCCCCCCcccccchhh
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVLR--CGHTIHLECLKEMEKHYRYTCPVCSKSLWDMS 62 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L~--CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~~~~ 62 (136)
.++..||||++.+ + ..+++.++ |||.||..|+.+++......||+||+.+....
T Consensus 9 ~~~~~CpICle~~-~-~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~ 64 (78)
T 1e4u_A 9 EDPVECPLCMEPL-E-IDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDP 64 (78)
T ss_dssp CCCCBCTTTCCBC-C-TTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCS
T ss_pred ccCCcCCccCccC-c-cccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCc
Confidence 4668999999984 3 23344444 99999999999998656688999999986543
No 26
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=6e-13 Score=84.51 Aligned_cols=47 Identities=19% Similarity=0.356 Sum_probs=39.4
Q ss_pred CCCcceecCcCccCCccceEEe-cCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVL-RCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L-~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
++..|+||++.+ .+++.+ +|||.||..|+.+|+.. ...||+||+.+.
T Consensus 14 ~~~~C~IC~~~~----~~p~~~~~CgH~fC~~Ci~~~~~~-~~~CP~Cr~~~~ 61 (72)
T 2djb_A 14 PYILCSICKGYL----IDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVH 61 (72)
T ss_dssp GGGSCTTTSSCC----SSCEECSSSCCEECHHHHHHHHHH-CSSCTTTCCCCC
T ss_pred CCCCCCCCChHH----HCcCEECCCCCHHHHHHHHHHHHc-CCcCCCcCcccC
Confidence 447899999994 346666 99999999999999974 688999998874
No 27
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=1.6e-12 Score=80.34 Aligned_cols=43 Identities=21% Similarity=0.692 Sum_probs=36.5
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhh--cCCCCCCc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKH--YRYTCPVC 54 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~--~~~~CP~C 54 (136)
++..|+||++.+ .++++++|||+||..||++|+.. ...+||+|
T Consensus 19 ~~~~C~IC~~~~----~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDIL----QKPVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBC----SSCEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred cCCCCCcCCchh----CCeEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 567899999984 45777899999999999999975 45679998
No 28
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=99.30 E-value=1.1e-12 Score=86.66 Aligned_cols=48 Identities=21% Similarity=0.459 Sum_probs=40.5
Q ss_pred CCCCcceecCcCccCCccceEEec-CCcHhhHHHHHHHHhh-cCCCCCCccccc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVLR-CGHTIHLECLKEMEKH-YRYTCPVCSKSL 58 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L~-CgH~fh~~Cl~~~~~~-~~~~CP~Cr~~~ 58 (136)
.++..|+||++.+ .++++++ |||+||..||.+|+.. +...||+||+.+
T Consensus 11 ~~~~~C~IC~~~~----~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 11 PDELLCLICKDIM----TDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp CTTTEETTTTEEC----SSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred CcCCCCCCCChhh----cCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 3568899999984 4678899 9999999999999875 347899999986
No 29
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=99.28 E-value=1.5e-12 Score=87.97 Aligned_cols=47 Identities=17% Similarity=0.372 Sum_probs=40.3
Q ss_pred CCcceecCcCccCCccceEE-ecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITV-LRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~-L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
+..|+||++.+ .+++. ++|||.||..||.+|+......||+||+.+.
T Consensus 22 ~~~C~IC~~~~----~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 22 VFRCFICMEKL----RDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQ 69 (100)
T ss_dssp HTBCTTTCSBC----SSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCccCCccc----cCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCC
Confidence 46799999994 45777 8999999999999999865478999999874
No 30
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=99.28 E-value=1.6e-12 Score=90.64 Aligned_cols=48 Identities=17% Similarity=0.329 Sum_probs=41.1
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccch
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLWD 60 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~~ 60 (136)
+..|+||++.+ .+++.++|||+||..|+..|+......||+||+.+..
T Consensus 52 ~~~C~IC~~~~----~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 52 TFQCICCQELV----FRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HTBCTTTSSBC----SSEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred CCCCCcCChHH----cCcEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 36799999994 4678899999999999999998556689999998854
No 31
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.27 E-value=3.8e-12 Score=82.18 Aligned_cols=48 Identities=19% Similarity=0.404 Sum_probs=40.4
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhc-----CCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHY-----RYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~-----~~~CP~Cr~~~~ 59 (136)
++..|+||++.+ .++++++|||.||..|+.+|+... ...||+||+.+.
T Consensus 18 ~~~~C~IC~~~~----~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 18 EEVTCPICLELL----KEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYP 70 (85)
T ss_dssp TTTSCTTTCSCC----SSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCC
T ss_pred cCCCCcCCChhh----CcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCC
Confidence 567899999994 456679999999999999999862 578999998874
No 32
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=7.2e-13 Score=83.45 Aligned_cols=46 Identities=17% Similarity=0.486 Sum_probs=39.1
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
++..|+||++.+ . + +.++|||.||..|+.+|+. ....||+||+.+.
T Consensus 14 ~~~~C~IC~~~~-~---~-~~~~CgH~fc~~Ci~~~~~-~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 14 DEEECCICMDGR-A---D-LILPCAHSFCQKCIDKWSD-RHRNCPICRLQMT 59 (70)
T ss_dssp CCCCCSSSCCSC-C---S-EEETTTEEECHHHHHHSSC-CCSSCHHHHHCTT
T ss_pred CCCCCeeCCcCc-c---C-cccCCCCcccHHHHHHHHH-CcCcCCCcCCccc
Confidence 457899999994 2 2 7789999999999999987 5788999998874
No 33
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=99.25 E-value=5.5e-12 Score=87.30 Aligned_cols=49 Identities=18% Similarity=0.357 Sum_probs=41.6
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccch
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLWD 60 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~~ 60 (136)
++..|+||++.+ .+++.++|||+||..|+.+|+......||+||+.+..
T Consensus 17 ~~~~C~IC~~~~----~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 17 SKYECPICLMAL----REAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp GGGBCTTTCSBC----SSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCcCChhh----cCeEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 447899999984 4567789999999999999998655699999998854
No 34
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=3.4e-12 Score=77.23 Aligned_cols=44 Identities=23% Similarity=0.667 Sum_probs=36.0
Q ss_pred CCCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhh--cCCCCCCc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKH--YRYTCPVC 54 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~--~~~~CP~C 54 (136)
.++..|+||++.+ .+++.++|||.||..|+.+|+.. ....||+|
T Consensus 13 ~~~~~C~IC~~~~----~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYL----KEPVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBC----SSCCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccCCCCccCCccc----CccEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 3567899999994 34566899999999999999764 45789998
No 35
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=99.23 E-value=6.3e-13 Score=85.24 Aligned_cols=49 Identities=24% Similarity=0.539 Sum_probs=40.3
Q ss_pred CCCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhc------CCCCCCcccccc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHY------RYTCPVCSKSLW 59 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~------~~~CP~Cr~~~~ 59 (136)
.++..|+||++.+ .+++.++|||+||..|+.+|+... ...||+||..+.
T Consensus 10 ~~~~~C~IC~~~~----~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 10 QEEVTCPICLELL----TEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp CCCCEETTTTEEC----SSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred ccCCCCcCCCccc----CCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 3568899999993 346668999999999999998752 567999998874
No 36
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.23 E-value=2.7e-12 Score=89.07 Aligned_cols=53 Identities=23% Similarity=0.392 Sum_probs=41.8
Q ss_pred CCCCCcceecCcCccCC---ccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 6 NVNDNFYNFGLQFIFDT---MKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~---~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
..++..|+||++.+.+. ...++.++|||+||..|+.+|+. .+..||+||+.+.
T Consensus 4 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~-~~~~CP~Cr~~~~ 59 (133)
T 4ap4_A 4 GSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK-NANTCPTCRKKIN 59 (133)
T ss_dssp -CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHT-TCSBCTTTCCBCT
T ss_pred CCCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHH-hCCCCCCCCCcCc
Confidence 34678999999994221 13348899999999999999998 4578999999885
No 37
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=4.1e-12 Score=81.99 Aligned_cols=49 Identities=27% Similarity=0.504 Sum_probs=40.5
Q ss_pred CCCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhh-----cCCCCCCcccccc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKH-----YRYTCPVCSKSLW 59 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~-----~~~~CP~Cr~~~~ 59 (136)
.++..|+||++.+ .+++.++|||.||..|+.+|+.. ....||+||+.+.
T Consensus 17 ~~~~~C~IC~~~~----~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 17 KEEVTCPICLELL----TQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCCCCTTTCSCC----SSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred cCCCCCCCCCccc----CCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccC
Confidence 3568899999994 34666899999999999999875 2678999998874
No 38
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=99.20 E-value=6.1e-12 Score=85.66 Aligned_cols=48 Identities=17% Similarity=0.383 Sum_probs=40.3
Q ss_pred CCCcceecCcCccCCccceEEe-cCCcHhhHHHHHHHHhhcCCCCCCcccccch
Q 032682 8 NDNFYNFGLQFIFDTMKDITVL-RCGHTIHLECLKEMEKHYRYTCPVCSKSLWD 60 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L-~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~~ 60 (136)
++..|+||++.+ .+++.+ +|||+||..|+.+|+. ....||+||+.+..
T Consensus 14 ~~~~C~IC~~~~----~~p~~~~~CgH~fC~~Ci~~~~~-~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 14 PHLMCVLCGGYF----IDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHK 62 (108)
T ss_dssp GGTBCTTTSSBC----SSEEEETTTCCEEEHHHHHHHHT-SCSBCTTTCCBSCS
T ss_pred CcCCCccCChHH----hCcCEeCCCCChhhHHHHHHHHH-hCCcCcCCCccccc
Confidence 457899999994 456666 9999999999999998 45889999988753
No 39
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=99.19 E-value=1.9e-12 Score=88.99 Aligned_cols=47 Identities=17% Similarity=0.493 Sum_probs=40.6
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
+..|+||++.+ .+++.++|||+||..|+.+|+..+...||+||+.+.
T Consensus 15 ~~~C~iC~~~~----~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 15 ECQCGICMEIL----VEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVS 61 (115)
T ss_dssp HHBCTTTCSBC----SSCEECTTSCEECHHHHCCCCCTTTSBCTTTCCBCH
T ss_pred CCCCccCCccc----CceeEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccC
Confidence 46799999994 457788999999999999998765788999999875
No 40
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=99.18 E-value=9.2e-12 Score=90.07 Aligned_cols=48 Identities=19% Similarity=0.412 Sum_probs=41.1
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccch
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLWD 60 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~~ 60 (136)
+..|+||++.+ .++++++|||+||..||.+|+......||+||..+..
T Consensus 78 ~~~C~IC~~~~----~~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 78 SFMCVCCQELV----YQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQ 125 (150)
T ss_dssp HTBCTTTSSBC----SSEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred CCEeecCChhh----cCCEEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCC
Confidence 46899999984 5677899999999999999998655689999998853
No 41
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=99.18 E-value=9.5e-12 Score=83.37 Aligned_cols=46 Identities=15% Similarity=0.490 Sum_probs=39.1
Q ss_pred CCcceecCcCccCCccceEEe-cCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVL-RCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L-~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
+..|+||++.+ .+++.+ +|||+||..|+.+|+. ....||+||..+.
T Consensus 22 ~~~C~IC~~~~----~~p~~~~~CgH~fC~~Ci~~~~~-~~~~CP~Cr~~~~ 68 (99)
T 2y43_A 22 LLRCGICFEYF----NIAMIIPQCSHNYCSLCIRKFLS-YKTQCPTCCVTVT 68 (99)
T ss_dssp HTBCTTTCSBC----SSEEECTTTCCEEEHHHHHHHHT-TCCBCTTTCCBCC
T ss_pred CCCcccCChhh----CCcCEECCCCCHhhHHHHHHHHH-CCCCCCCCCCcCC
Confidence 36799999994 346667 9999999999999998 4688999999875
No 42
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=99.15 E-value=3.8e-12 Score=89.02 Aligned_cols=53 Identities=19% Similarity=0.377 Sum_probs=3.1
Q ss_pred CCCCCCcceecCcCccCC-------------c-cceEEecCCcHhhHHHHHHHHhhcCCCCCCccccc
Q 032682 5 LNVNDNFYNFGLQFIFDT-------------M-KDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSL 58 (136)
Q Consensus 5 ~~~~~~~CpIC~e~lf~~-------------~-~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~ 58 (136)
+++.+..|+||++.+.+. . ..++.++|||.||..||.+|+.. +..||+||+.+
T Consensus 44 wd~~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~-~~~CP~Cr~~~ 110 (117)
T 4a0k_B 44 WDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT-RQVCPLDNREW 110 (117)
T ss_dssp ECCCC---------------------------------------------------------------
T ss_pred ecCCCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc-CCcCCCCCCee
Confidence 456778999999994221 1 12333599999999999999984 67899999875
No 43
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=99.15 E-value=1.6e-11 Score=84.44 Aligned_cols=48 Identities=17% Similarity=0.270 Sum_probs=41.1
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccch
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLWD 60 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~~ 60 (136)
+..||||++.+ .+++.++|||+||..|+.+|+......||+||+.+..
T Consensus 23 ~~~C~IC~~~~----~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 23 SISCQICEHIL----ADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HTBCTTTCSBC----SSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCCCCcHh----cCcEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 46799999994 5677799999999999999998656789999998753
No 44
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=99.15 E-value=1.6e-11 Score=89.38 Aligned_cols=46 Identities=22% Similarity=0.459 Sum_probs=39.0
Q ss_pred CcceecCcCccCCccceEEe-cCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVL-RCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L-~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
..|+||++.+ .+++.+ +|||+||..|+.+|+......||+||+.+.
T Consensus 55 ~~C~IC~~~~----~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 55 LMCPICLDML----KNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 101 (165)
T ss_dssp HBCTTTSSBC----SSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CCCcccChHh----hCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCC
Confidence 4799999994 345666 999999999999999865788999999874
No 45
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=99.14 E-value=2e-11 Score=80.40 Aligned_cols=47 Identities=13% Similarity=-0.003 Sum_probs=41.6
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
++..||||++.| .++++++|||+|++.||.+|+. ...+||+||..+.
T Consensus 13 ~~~~CpI~~~~m----~dPV~~~cGhtf~r~~I~~~l~-~~~~cP~~~~~l~ 59 (85)
T 2kr4_A 13 DEFRDPLMDTLM----TDPVRLPSGTVMDRSIILRHLL-NSPTDPFNRQMLT 59 (85)
T ss_dssp TTTBCTTTCSBC----SSEEECTTSCEEEHHHHHHHHH-HCSBCTTTCCBCC
T ss_pred hheECcccCchh----cCCeECCCCCEECHHHHHHHHh-cCCCCCCCcCCCC
Confidence 458899999994 7899999999999999999998 4688999998874
No 46
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=2.5e-11 Score=79.40 Aligned_cols=52 Identities=17% Similarity=0.296 Sum_probs=41.0
Q ss_pred CCCCCcceecCcCccCCccceEEecCC-----cHhhHHHHHHHHhhc-CCCCCCcccccc
Q 032682 6 NVNDNFYNFGLQFIFDTMKDITVLRCG-----HTIHLECLKEMEKHY-RYTCPVCSKSLW 59 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~~~~~~~L~Cg-----H~fh~~Cl~~~~~~~-~~~CP~Cr~~~~ 59 (136)
..++..|+||++. |+... ..++||+ |.||..||++|+... ..+||+||..+.
T Consensus 12 ~~~~~~C~IC~~~-~~~~~-~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~ 69 (80)
T 2d8s_A 12 PSSQDICRICHCE-GDDES-PLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFI 69 (80)
T ss_dssp CTTSCCCSSSCCC-CCSSS-CEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCC
T ss_pred CCCCCCCeEcCcc-ccCCC-eeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeee
Confidence 3456789999998 55433 4568996 999999999999863 368999998873
No 47
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.11 E-value=1.7e-11 Score=83.39 Aligned_cols=47 Identities=19% Similarity=0.403 Sum_probs=38.7
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhc--CCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHY--RYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~--~~~CP~Cr~~~~ 59 (136)
...|+||++.+ .+++.++|||.||..|+.+|+... ...||+||..+.
T Consensus 21 ~~~C~IC~~~~----~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 69 (112)
T 1jm7_A 21 ILECPICLELI----KEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69 (112)
T ss_dssp HTSCSSSCCCC----SSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCC
T ss_pred CCCCcccChhh----cCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCC
Confidence 36799999984 456668999999999999999853 257999998874
No 48
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=99.11 E-value=3.1e-11 Score=81.89 Aligned_cols=47 Identities=13% Similarity=0.013 Sum_probs=41.5
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
++..||||++.| .+|++++|||+|++.||.+|+. ...+||+||..+.
T Consensus 28 ~~~~CpI~~~~m----~dPV~~~cGhtf~r~~I~~~l~-~~~~cP~~~~~l~ 74 (100)
T 2kre_A 28 DEFRDPLMDTLM----TDPVRLPSGTIMDRSIILRHLL-NSPTDPFNRQTLT 74 (100)
T ss_dssp TTTBCTTTCSBC----SSEEEETTTEEEEHHHHHHHTT-SCSBCSSSCCBCC
T ss_pred HhhCCcCccCcc----cCCeECCCCCEEchHHHHHHHH-cCCCCCCCCCCCC
Confidence 357899999994 7899999999999999999998 5688999998874
No 49
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.09 E-value=2.9e-11 Score=83.78 Aligned_cols=54 Identities=22% Similarity=0.403 Sum_probs=42.2
Q ss_pred CCCCCcceecCcCccCC---ccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccch
Q 032682 6 NVNDNFYNFGLQFIFDT---MKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLWD 60 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~---~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~~ 60 (136)
+.++..|+||++.+.+. ...++.++|||.||..|+++|+.. ...||+||+.+..
T Consensus 69 ~~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~~ 125 (133)
T 4ap4_A 69 GSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-ANTCPTCRKKINH 125 (133)
T ss_dssp SSSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHH-CSBCTTTCCBCCG
T ss_pred CCCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHc-CCCCCCCCCcCCh
Confidence 44668899999984221 223477899999999999999984 6799999998753
No 50
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=99.09 E-value=9.7e-12 Score=89.13 Aligned_cols=47 Identities=15% Similarity=0.272 Sum_probs=40.1
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSL 58 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~ 58 (136)
++..|+||++.+ .+++.++|||+||..||.+|+..+...||+||+.+
T Consensus 30 ~~~~C~IC~~~~----~~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 30 AKYLCSACRNVL----RRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEG 76 (141)
T ss_dssp GGGBCTTTCSBC----SSEEECTTSCEEEHHHHHHHGGGSCEECHHHHHTT
T ss_pred cCcCCCCCChhh----cCcEECCCCCccCHHHHHHHHhcCCCCCCCCCCcc
Confidence 457899999994 45677899999999999999986556899999864
No 51
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=99.06 E-value=6.4e-11 Score=80.07 Aligned_cols=47 Identities=15% Similarity=0.060 Sum_probs=41.5
Q ss_pred CCCcceecCcCccCCccceEEecCC-cHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCG-HTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~Cg-H~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
++..||||++.| ++|++++|| |+|++.||++|+.. ..+||+||..+.
T Consensus 21 ~~~~CpI~~~~m----~dPV~~~cG~htf~r~cI~~~l~~-~~~cP~~~~~l~ 68 (98)
T 1wgm_A 21 DEFLDPIMSTLM----CDPVVLPSSRVTVDRSTIARHLLS-DQTDPFNRSPLT 68 (98)
T ss_dssp TTTBCTTTCSBC----SSEEECTTTCCEEEHHHHHHHTTT-SCBCTTTCSBCC
T ss_pred HhcCCcCccccc----cCCeECCCCCeEECHHHHHHHHHh-CCCCCCCCCCCC
Confidence 457899999994 789999999 99999999999984 678999998874
No 52
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.04 E-value=1.3e-10 Score=89.55 Aligned_cols=48 Identities=13% Similarity=0.115 Sum_probs=41.9
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
+...||||++.| .+|++++|||+||+.||.+|+..+...||+||..+.
T Consensus 207 ~~~~c~i~~~~~----~dPv~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~ 254 (281)
T 2c2l_A 207 DYLCGKISFELM----REPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLT 254 (281)
T ss_dssp STTBCTTTCSBC----SSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCC
T ss_pred cccCCcCcCCHh----cCCeECCCCCEECHHHHHHHHHHCCCCCcCCCCCCc
Confidence 568899999994 688899999999999999999865556999998874
No 53
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=99.02 E-value=9.1e-11 Score=73.28 Aligned_cols=48 Identities=21% Similarity=0.355 Sum_probs=39.5
Q ss_pred CCCcceecCcCccCCccceEEe--cCCcH-hhHHHHHHHHhhcCCCCCCcccccch
Q 032682 8 NDNFYNFGLQFIFDTMKDITVL--RCGHT-IHLECLKEMEKHYRYTCPVCSKSLWD 60 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L--~CgH~-fh~~Cl~~~~~~~~~~CP~Cr~~~~~ 60 (136)
++..|+||++. ..+++.+ ||||. ||..|+.+|+. .+..||+||..+.+
T Consensus 7 ~~~~C~IC~~~----~~~~~~~~~pCgH~~~C~~C~~~~~~-~~~~CPiCR~~i~~ 57 (64)
T 2vje_A 7 AIEPCVICQGR----PKNGCIVHGKTGHLMACFTCAKKLKK-RNKPCPVCRQPIQM 57 (64)
T ss_dssp GGSCCTTTSSS----CSCEEEEETTEEEEEECHHHHHHHHH-TTCCCTTTCCCCCE
T ss_pred CcCCCCcCCCC----CCCEEEECCCCCChhhHHHHHHHHHH-cCCcCCCcCcchhc
Confidence 56789999998 3556666 99999 89999999987 45789999988743
No 54
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.02 E-value=2.8e-10 Score=76.00 Aligned_cols=46 Identities=22% Similarity=0.382 Sum_probs=38.9
Q ss_pred CCCcceecCcCccCCccceEEec-CCcHhhHHHHHHHHhhc-----CCCCCC--cccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLR-CGHTIHLECLKEMEKHY-----RYTCPV--CSKS 57 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~-CgH~fh~~Cl~~~~~~~-----~~~CP~--Cr~~ 57 (136)
.+..||||++.| .+|++++ |||+|++.||.+|+... ..+||+ |++.
T Consensus 6 ~~~~CPI~~~~~----~dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 6 SGFTCPITKEEM----KKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SCCBCTTTCSBC----SSEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred cEeECcCcCchh----cCCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 457899999994 6788895 99999999999999753 368999 9865
No 55
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=99.01 E-value=1e-10 Score=85.40 Aligned_cols=49 Identities=18% Similarity=0.357 Sum_probs=41.7
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccch
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLWD 60 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~~ 60 (136)
++..||||++.+ .+++.++|||+||..|+.+|+.....+||+||..+..
T Consensus 17 ~~~~C~IC~~~~----~~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 17 SKYECPICLMAL----REAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (170)
T ss_dssp GGGBCTTTCSBC----SSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCChhh----cCcEECCCCCHHHHHHHHHHHHhCCCCCCCCccCcch
Confidence 457899999994 4567799999999999999998655699999998854
No 56
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.99 E-value=4.9e-11 Score=76.39 Aligned_cols=43 Identities=19% Similarity=0.468 Sum_probs=36.7
Q ss_pred CCcceecCcCccCCccceEEecCCcH-hhHHHHHHHHhhcCCCCCCcccccch
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHT-IHLECLKEMEKHYRYTCPVCSKSLWD 60 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~-fh~~Cl~~~~~~~~~~CP~Cr~~~~~ 60 (136)
+..|+||++.+ .+++.++|||. ||..|+..| ..||+||+.+..
T Consensus 24 ~~~C~iC~~~~----~~~~~~pCgH~~~C~~C~~~~-----~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 24 EKLCKICMDRN----IAIVFVPCGHLVTCKQCAEAV-----DKCPMCYTVITF 67 (74)
T ss_dssp HTBCTTTSSSB----CCEEEETTCCBCCCHHHHTTC-----SBCTTTCCBCSE
T ss_pred CCCCCCCCCCC----CCEEEcCCCChhHHHHhhhcC-----ccCCCcCcCccC
Confidence 46799999983 56788999999 999999887 689999988753
No 57
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.99 E-value=1.3e-10 Score=72.35 Aligned_cols=50 Identities=20% Similarity=0.383 Sum_probs=40.0
Q ss_pred CCCCCcceecCcCccCCccceEEe--cCCcH-hhHHHHHHHHhhcCCCCCCcccccch
Q 032682 6 NVNDNFYNFGLQFIFDTMKDITVL--RCGHT-IHLECLKEMEKHYRYTCPVCSKSLWD 60 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~~~~~~~L--~CgH~-fh~~Cl~~~~~~~~~~CP~Cr~~~~~ 60 (136)
...+..|+||++. ..+++++ ||||. ||..|+.+|+. .+..||+||+.+.+
T Consensus 4 ~~~~~~C~IC~~~----~~~~~~~~~pCgH~~~C~~C~~~~~~-~~~~CPiCR~~i~~ 56 (63)
T 2vje_B 4 QNLLKPCSLCEKR----PRDGNIIHGRTGHLVTCFHCARRLKK-AGASCPICKKEIQL 56 (63)
T ss_dssp GGGGSBCTTTSSS----BSCEEEEETTEEEEEECHHHHHHHHH-TTCBCTTTCCBCCE
T ss_pred CCcCCCCcccCCc----CCCeEEEecCCCCHhHHHHHHHHHHH-hCCcCCCcCchhhc
Confidence 3456789999987 3455556 99998 99999999987 35789999998743
No 58
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.99 E-value=2.8e-11 Score=73.60 Aligned_cols=45 Identities=22% Similarity=0.284 Sum_probs=36.8
Q ss_pred CCCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
.++..|+||++.+ .++++|+|||+||..|+.+| ...||+||+.+.
T Consensus 4 ~~~~~C~IC~~~~----~~p~~l~CgH~fC~~Ci~~~----~~~CP~Cr~~~~ 48 (56)
T 1bor_A 4 FQFLRCQQCQAEA----KCPKLLPCLHTLCSGCLEAS----GMQCPICQAPWP 48 (56)
T ss_dssp CCCSSCSSSCSSC----BCCSCSTTSCCSBTTTCSSS----SSSCSSCCSSSS
T ss_pred ccCCCceEeCCcc----CCeEEcCCCCcccHHHHccC----CCCCCcCCcEee
Confidence 4568899999983 45677999999999999773 478999998863
No 59
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.96 E-value=4.4e-11 Score=82.61 Aligned_cols=44 Identities=20% Similarity=0.475 Sum_probs=37.8
Q ss_pred CCcceecCcCccCCccceEEe-cCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVL-RCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L-~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
+..|+||++.+ .+++++ +|||+||..|+.+|+. ..||+||+.+.
T Consensus 22 ~~~C~IC~~~~----~~pv~~~~CgH~fC~~Ci~~~~~---~~CP~Cr~~~~ 66 (117)
T 1jm7_B 22 LLRCSRCTNIL----REPVCLGGCEHIFCSNCVSDCIG---TGCPVCYTPAW 66 (117)
T ss_dssp TTSCSSSCSCC----SSCBCCCSSSCCBCTTTGGGGTT---TBCSSSCCBCS
T ss_pred CCCCCCCChHh----hCccEeCCCCCHHHHHHHHHHhc---CCCcCCCCcCc
Confidence 57899999994 456677 9999999999999976 78999998874
No 60
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.93 E-value=4.4e-10 Score=92.51 Aligned_cols=47 Identities=21% Similarity=0.446 Sum_probs=40.5
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
...|+||++.+ .+++.++|||.||..|+.+|+......||+||..+.
T Consensus 332 ~~~C~ICle~~----~~pv~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~ 378 (389)
T 2y1n_A 332 FQLCKICAEND----KDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIK 378 (389)
T ss_dssp SSBCTTTSSSB----CCEEEETTCCEECHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCccCcCC----CCeEEeCCCChhhHHHHHHHHhcCCCCCCCCCCccC
Confidence 36899999983 567889999999999999998755678999998874
No 61
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.89 E-value=1.3e-09 Score=81.18 Aligned_cols=48 Identities=13% Similarity=0.106 Sum_probs=41.3
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
+...||||++.| .+|++++|||+|++.||..|+..+..+||+|+..+.
T Consensus 105 ~~f~CPI~~elm----~DPV~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~ 152 (179)
T 2f42_A 105 DYLCGKISFELM----REPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLT 152 (179)
T ss_dssp GGGBCTTTCSBC----SSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred HhhcccCccccC----CCCeECCCCCEECHHHHHHHHHhCCCCCCCCcCCCC
Confidence 457899999994 678999999999999999999864457999998874
No 62
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=1.3e-09 Score=68.85 Aligned_cols=48 Identities=21% Similarity=0.324 Sum_probs=39.5
Q ss_pred CCCCCCCcceecCcCccCCccceEEecCCcH-hhHHHHHHHHhhcCCCCCCcccccch
Q 032682 4 ELNVNDNFYNFGLQFIFDTMKDITVLRCGHT-IHLECLKEMEKHYRYTCPVCSKSLWD 60 (136)
Q Consensus 4 ~~~~~~~~CpIC~e~lf~~~~~~~~L~CgH~-fh~~Cl~~~~~~~~~~CP~Cr~~~~~ 60 (136)
.+..++..|+||++. ..+++.+||||. ||..|+.. ...||+||..+..
T Consensus 10 ~~~~~~~~C~IC~~~----~~~~v~~pCgH~~~C~~C~~~-----~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 10 PSEENSKDCVVCQNG----TVNWVLLPCRHTCLCDGCVKY-----FQQCPMCRQFVQE 58 (68)
T ss_dssp CSCCCSSCCSSSSSS----CCCCEETTTTBCCSCTTHHHH-----CSSCTTTCCCCCC
T ss_pred ccCCCCCCCCCcCcC----CCCEEEECCCChhhhHHHHhc-----CCCCCCCCcchhc
Confidence 455677899999987 367888999999 99999973 3689999988754
No 63
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.81 E-value=3.4e-09 Score=70.36 Aligned_cols=49 Identities=20% Similarity=0.353 Sum_probs=36.3
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhh----c---CCCCCC--cccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKH----Y---RYTCPV--CSKS 57 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~----~---~~~CP~--Cr~~ 57 (136)
+...|+||++. +.......+.+|||.||..|+.+++.. + ..+||. |+..
T Consensus 4 ~~~~C~IC~~~-~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 4 GSSGCKLCLGE-YPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp SBCCCSSSCCC-CBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CCcCCcccCcc-cccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 45789999998 433222222379999999999998864 1 257999 9988
No 64
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.79 E-value=1.1e-09 Score=70.08 Aligned_cols=42 Identities=19% Similarity=0.429 Sum_probs=34.5
Q ss_pred CcceecCcCccCCccceEEecCCcH-hhHHHHHHHHhhcCCCCCCcccccch
Q 032682 10 NFYNFGLQFIFDTMKDITVLRCGHT-IHLECLKEMEKHYRYTCPVCSKSLWD 60 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L~CgH~-fh~~Cl~~~~~~~~~~CP~Cr~~~~~ 60 (136)
..|+||++.+ .+++.++|||. ||..|+.. ...||+||+.+..
T Consensus 26 ~~C~IC~~~~----~~~~~~pCgH~~~C~~C~~~-----~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 26 KLCKICMDRN----IAIVFVPCGHLVTCKQCAEA-----VDKCPMCYTVITF 68 (75)
T ss_dssp HSCSSSCSSC----CCBCCSSSCCCCBCHHHHHH-----CSBCTTTCCBCCC
T ss_pred CCCCcCCCCC----CCEEEecCCCHHHHHHHhhC-----CCCCccCCceecC
Confidence 5699999983 56777899999 99999963 3689999988743
No 65
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.76 E-value=8.5e-10 Score=71.63 Aligned_cols=43 Identities=23% Similarity=0.428 Sum_probs=36.2
Q ss_pred CCcceecCcCccCCccceEEecCCcH-hhHHHHHHHHhhcCCCCCCcccccch
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHT-IHLECLKEMEKHYRYTCPVCSKSLWD 60 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~-fh~~Cl~~~~~~~~~~CP~Cr~~~~~ 60 (136)
+..|+||++. ..+++.+||||. ||..|+..| ..||+||..+..
T Consensus 18 ~~~C~IC~~~----~~~~v~~pCgH~~~C~~C~~~~-----~~CP~Cr~~i~~ 61 (79)
T 2yho_A 18 AMLCMVCCEE----EINSTFCPCGHTVCCESCAAQL-----QSCPVCRSRVEH 61 (79)
T ss_dssp HTBCTTTSSS----BCCEEEETTCBCCBCHHHHTTC-----SBCTTTCCBCCE
T ss_pred CCEeEEeCcc----cCcEEEECCCCHHHHHHHHHhc-----CcCCCCCchhhC
Confidence 4679999988 367888999999 999999866 389999998854
No 66
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.71 E-value=6.9e-09 Score=66.92 Aligned_cols=47 Identities=19% Similarity=0.462 Sum_probs=36.9
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhc-CCCCCCccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHY-RYTCPVCSKSL 58 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~-~~~CP~Cr~~~ 58 (136)
...|+||.+.+.. ...-..|+|.||..||.+|+... ..+||+||...
T Consensus 15 i~~C~IC~~~i~~---g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w 62 (74)
T 2ct0_A 15 VKICNICHSLLIQ---GQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYW 62 (74)
T ss_dssp SCBCSSSCCBCSS---SEECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCC
T ss_pred CCcCcchhhHccc---CCccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcC
Confidence 3679999999532 33334899999999999999752 36899999775
No 67
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.59 E-value=1.4e-08 Score=79.64 Aligned_cols=47 Identities=13% Similarity=0.276 Sum_probs=38.6
Q ss_pred CCcceecCcCccCCccceEEe-cCCcHhhHHHHHHHHhh-cCCCCCC--cccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVL-RCGHTIHLECLKEMEKH-YRYTCPV--CSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L-~CgH~fh~~Cl~~~~~~-~~~~CP~--Cr~~~~ 59 (136)
+..||||++.| .+|+.. .|||+|++.||.+|+.. +...||+ |++.+.
T Consensus 181 el~CPIcl~~f----~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~ 231 (267)
T 3htk_C 181 ELTCPITCKPY----EAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVS 231 (267)
T ss_dssp CSBCTTTSSBC----SSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEEC
T ss_pred eeECcCccCcc----cCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCc
Confidence 36799999994 566664 99999999999999875 3467999 998764
No 68
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.47 E-value=1.7e-08 Score=81.82 Aligned_cols=42 Identities=19% Similarity=0.543 Sum_probs=36.4
Q ss_pred CCcceecCcCccCCccceEEecCCcH-hhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHT-IHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~-fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
+..|+||++.+ .+++.+||||. ||..|+..| ..||+||..+.
T Consensus 295 ~~~C~IC~~~~----~~~v~lpCgH~~fC~~C~~~~-----~~CP~CR~~i~ 337 (345)
T 3t6p_A 295 ERTCKVCMDKE----VSVVFIPCGHLVVCQECAPSL-----RKCPICRGIIK 337 (345)
T ss_dssp TCBCTTTSSSB----CCEEEETTCCEEECTTTGGGC-----SBCTTTCCBCC
T ss_pred CCCCCccCCcC----CceEEcCCCChhHhHHHHhcC-----CcCCCCCCCcc
Confidence 46899999983 67888999999 999999877 57999998874
No 69
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=98.43 E-value=7.6e-08 Score=59.42 Aligned_cols=47 Identities=15% Similarity=0.297 Sum_probs=35.9
Q ss_pred CCCcceecCcCccCCccceEEecCC--c---HhhHHHHHHHHhh-cCCCCCCccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCG--H---TIHLECLKEMEKH-YRYTCPVCSKSL 58 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~Cg--H---~fh~~Cl~~~~~~-~~~~CP~Cr~~~ 58 (136)
+...|.||++. .+ +..++||. | .||..||++|+.. ++.+||+|+..+
T Consensus 5 ~~~~CrIC~~~-~~---~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~ 57 (60)
T 1vyx_A 5 DVPVCWICNEE-LG---NERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVY 57 (60)
T ss_dssp SCCEETTTTEE-CS---CCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBC
T ss_pred CCCEeEEeecC-CC---CceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCee
Confidence 45789999987 22 23357865 4 9999999999975 467899998776
No 70
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.34 E-value=1.9e-07 Score=57.71 Aligned_cols=46 Identities=9% Similarity=0.065 Sum_probs=38.6
Q ss_pred CCcceecCcCccCCccceEEe-cCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVL-RCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L-~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
...|||+++.| .+++++ ++||+|.++||++|+.. +.+||+.+..+.
T Consensus 3 ~~~CpIs~~~m----~dPV~~~~sG~~yer~~I~~~l~~-~~~cP~t~~~L~ 49 (61)
T 2bay_A 3 HMLCAISGKVP----RRPVLSPKSRTIFEKSLLEQYVKD-TGNDPITNEPLS 49 (61)
T ss_dssp -CCCTTTCSCC----SSEEEETTTTEEEEHHHHHHHHHH-HSBCTTTCCBCC
T ss_pred eEEecCCCCCC----CCCEEeCCCCcEEcHHHHHHHHHh-CCCCcCCcCCCC
Confidence 36799999995 577888 99999999999999985 356999998874
No 71
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=98.28 E-value=1e-07 Score=77.56 Aligned_cols=51 Identities=24% Similarity=0.353 Sum_probs=37.2
Q ss_pred CCcceecCcCccCCccce-E---EecCCcHhhHHHHHHHHhhc-C---------CCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDI-T---VLRCGHTIHLECLKEMEKHY-R---------YTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~-~---~L~CgH~fh~~Cl~~~~~~~-~---------~~CP~Cr~~~~ 59 (136)
...|+||++.+.++..-+ + -.+|||.||..||.+|+.+. . ..||.||+.+.
T Consensus 308 ~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs 372 (381)
T 3k1l_B 308 ELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLS 372 (381)
T ss_dssp CCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEE
T ss_pred CccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCC
Confidence 457999999954422222 1 24799999999999999752 1 35999999874
No 72
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=98.09 E-value=1.2e-06 Score=59.21 Aligned_cols=49 Identities=22% Similarity=0.312 Sum_probs=39.0
Q ss_pred cceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccchhh
Q 032682 11 FYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLWDMS 62 (136)
Q Consensus 11 ~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~~~~ 62 (136)
.|++|.-++ ....+.+||+|.||.+|+..|.+.+...||.|+..+.+++
T Consensus 3 fC~~C~~Pi---~iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rVe 51 (101)
T 3vk6_A 3 FCDKCGLPI---KVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIE 51 (101)
T ss_dssp BCTTTCSBC---SEEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEEE
T ss_pred ecCccCCCe---EEEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeeeE
Confidence 478887773 2345678999999999999998766788999998886544
No 73
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=97.13 E-value=0.00018 Score=55.40 Aligned_cols=47 Identities=19% Similarity=0.456 Sum_probs=36.0
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhh-cCCCCCCccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKH-YRYTCPVCSKSL 58 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~-~~~~CP~Cr~~~ 58 (136)
-..|.||.+.++. ..+--.|+|.||..|+..|+.. ....||.|+...
T Consensus 180 i~~C~iC~~iv~~---g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W 227 (238)
T 3nw0_A 180 VKICNICHSLLIQ---GQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYW 227 (238)
T ss_dssp CCBCTTTCSBCSS---CEECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBC
T ss_pred CCcCcchhhHHhC---CcccCccChHHHHHHHHHHHHhCCCCCCCCCCCCC
Confidence 4679999999642 3333359999999999999875 346899998764
No 74
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=95.60 E-value=0.0067 Score=39.82 Aligned_cols=33 Identities=24% Similarity=0.273 Sum_probs=25.4
Q ss_pred CCCcceecCcCccCCccceEE--ecCCcHhhHHHHHHH
Q 032682 8 NDNFYNFGLQFIFDTMKDITV--LRCGHTIHLECLKEM 43 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~--L~CgH~fh~~Cl~~~ 43 (136)
++..|+||.+..+ .+++. +.|+|+||..|++.+
T Consensus 2 ee~~C~~C~~~~~---~~av~~C~~C~~~~C~~Cl~~~ 36 (101)
T 2jun_A 2 EKVLCQFCDQDPA---QDAVKTCVTCEVSYCDECLKAT 36 (101)
T ss_dssp CCCBCTTCCSSSC---CBCCEEETTTTEEECHHHHHHH
T ss_pred CCCCCcCCCCCCC---CCceEECCcCChHHhHHHCHHH
Confidence 4678999997522 33444 899999999999984
No 75
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=95.15 E-value=0.0067 Score=40.46 Aligned_cols=46 Identities=24% Similarity=0.491 Sum_probs=35.9
Q ss_pred CCCcceecCcCccCCccceEEecCC-cHhhHHHHHHHHhhcCCCCCCcccccch
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCG-HTIHLECLKEMEKHYRYTCPVCSKSLWD 60 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~Cg-H~fh~~Cl~~~~~~~~~~CP~Cr~~~~~ 60 (136)
...+|-.|+-. . +. ++.|. |.+|..||..++. .+.+||+|.+.+..
T Consensus 27 G~~nCKsCWf~---~-k~--LV~C~dHYLCl~CLtlmL~-~SdrCpIC~~pLPt 73 (99)
T 2ko5_A 27 GPQFCKSCWFE---N-KG--LVECNNHYLCLNCLTLLLS-VSNRCPICKMPLPT 73 (99)
T ss_dssp CCCCCCSSCSC---C-SS--EEECSSCEEEHHHHHHTCS-SSSEETTTTEECCC
T ss_pred CcccChhhccc---c-CC--eeeecchhhHHHHHHHHHh-hccCCcccCCcCCc
Confidence 34789999954 2 22 35786 9999999999987 56889999998853
No 76
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=92.05 E-value=0.06 Score=36.69 Aligned_cols=37 Identities=27% Similarity=0.450 Sum_probs=29.6
Q ss_pred cccccCCCCCCCCccchhhhhh-cCCCCCCcccccccCCC
Q 032682 85 MVWILCNDCGANSHVQFHVIAH-KCLSCKSYNTRQTRGDT 123 (136)
Q Consensus 85 ~~~i~C~~C~~~~~~~~h~~~~-kC~~C~synt~~~~~~~ 123 (136)
.....|.+|+....... ... +||.||+.+...++|..
T Consensus 71 p~~~~C~~CG~~~e~~~--~~~~~CP~Cgs~~~~i~~G~e 108 (119)
T 2kdx_A 71 KVELECKDCSHVFKPNA--LDYGVCEKCHSKNVIITQGNE 108 (119)
T ss_dssp CCEEECSSSSCEECSCC--STTCCCSSSSSCCCEEEESSC
T ss_pred cceEEcCCCCCEEeCCC--CCCCcCccccCCCcEEecCCe
Confidence 45789999998765543 456 89999999999998864
No 77
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=89.83 E-value=0.1 Score=32.17 Aligned_cols=47 Identities=13% Similarity=0.188 Sum_probs=31.4
Q ss_pred CCCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhh---cCCCCCCcccc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKH---YRYTCPVCSKS 57 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~---~~~~CP~Cr~~ 57 (136)
..+..|.||.+. ..-+.--.|...||..|+...+.. +.-.||.|+..
T Consensus 10 ~~~~~C~vC~~~----~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 10 APGARCGVCGDG----TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp CTTCCCTTTSCC----TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCCCCcCCCCCC----CeEEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 345679999865 221111178999999999866543 34579999643
No 78
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=89.27 E-value=0.44 Score=31.28 Aligned_cols=52 Identities=21% Similarity=0.385 Sum_probs=37.2
Q ss_pred CCCCcceecCcCccCCcc-ceEE--ecCCcHhhHHHHHHHHhhcCCCCCCccccc
Q 032682 7 VNDNFYNFGLQFIFDTMK-DITV--LRCGHTIHLECLKEMEKHYRYTCPVCSKSL 58 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~-~~~~--L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~ 58 (136)
.+...|.||-+.+-.... .+.+ --|+--.|+.|++--...++..||.|+..+
T Consensus 14 ~~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrY 68 (93)
T 1weo_A 14 LDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRY 68 (93)
T ss_dssp CSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCC
T ss_pred cCCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCcc
Confidence 355789999998522222 1222 268889999999887776778899998776
No 79
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=87.28 E-value=0.28 Score=34.42 Aligned_cols=39 Identities=21% Similarity=0.445 Sum_probs=28.8
Q ss_pred cccccCCCCCCCCcc-------------chhhh------hhcCCCCCCcccccccCCC
Q 032682 85 MVWILCNDCGANSHV-------------QFHVI------AHKCLSCKSYNTRQTRGDT 123 (136)
Q Consensus 85 ~~~i~C~~C~~~~~~-------------~~h~~------~~kC~~C~synt~~~~~~~ 123 (136)
.....|.+|+..... .+|++ ..+||.|||.+...++|..
T Consensus 68 p~~~~C~~CG~~~~~~~~~~~~~~~~~~~~h~~p~~~~~~~~CP~Cgs~~~~i~~G~e 125 (139)
T 3a43_A 68 EAVFKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSHDFEVVKGRG 125 (139)
T ss_dssp CCEEEETTTCCEEEGGGCTTCCSCCCGGGCCCCGGGCGGGCSCSSSSCCCEEEEESSC
T ss_pred CCcEECCCCCCEEecccccccccccccccccccccccccCCcCccccCCccEEecCCe
Confidence 457899999976443 22333 6899999999998887753
No 80
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=85.65 E-value=0.26 Score=32.86 Aligned_cols=48 Identities=21% Similarity=0.302 Sum_probs=30.3
Q ss_pred CCCCCcceecCcCccCCccceE-EecCCcHhhHHHHHHHHhh---cCCCCCCcc
Q 032682 6 NVNDNFYNFGLQFIFDTMKDIT-VLRCGHTIHLECLKEMEKH---YRYTCPVCS 55 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~~~~~~-~L~CgH~fh~~Cl~~~~~~---~~~~CP~Cr 55 (136)
..++..|.||.+. -+ ..+.+ --.|+..||..|+...+.. ....||.|+
T Consensus 4 ~~~~~~C~~C~~~-g~-~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 4 GSSGANCAVCDSP-GD-LLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCCCSCBTTTCCC-CC-TTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCCCcCCCCC-CC-CcCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 4577899999876 21 11222 1278999999999765432 234577663
No 81
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=84.65 E-value=1.7 Score=30.70 Aligned_cols=47 Identities=11% Similarity=0.272 Sum_probs=32.3
Q ss_pred CCCCCcceecCcCccCCccceEEe-cCCcHhhHHHHHHHHh----------hcCCCCCCcccc
Q 032682 6 NVNDNFYNFGLQFIFDTMKDITVL-RCGHTIHLECLKEMEK----------HYRYTCPVCSKS 57 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~~~~~~~L-~CgH~fh~~Cl~~~~~----------~~~~~CP~Cr~~ 57 (136)
..++..|.||.+. .....- .|.-.||..|+..-+. .+.-.||.|+..
T Consensus 60 Dg~~d~C~vC~~G-----G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 60 DGMDEQCRWCAEG-----GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp TSCBCSCSSSCCC-----SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCCCCeecccCCC-----CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 3456789999976 222211 7899999999996442 245569999743
No 82
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=84.05 E-value=0.47 Score=30.73 Aligned_cols=36 Identities=17% Similarity=0.278 Sum_probs=27.0
Q ss_pred CCCCcceecCcCccCCccceEEecC----CcHhhHHHHHHHHhh
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVLRC----GHTIHLECLKEMEKH 46 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L~C----gH~fh~~Cl~~~~~~ 46 (136)
.....|.+|.|.|-+ ...+.| +|.||-.|-+..++.
T Consensus 13 ~a~l~CtlC~erLEd----tHFVQCPsv~~HkFCFpCsr~sIk~ 52 (93)
T 2cs3_A 13 SGPLCCTICHERLED----THFVQCPSVPSHKFCFPCSRESIKA 52 (93)
T ss_dssp CCSCCCSSSCSCCSS----TTSEECSSCSSCEECHHHHHHHHHH
T ss_pred CCeeEeecchhhhcc----CceeeCCCccCCeeeccccHHHHHh
Confidence 445789999999733 222345 699999999998876
No 83
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=79.99 E-value=0.47 Score=28.47 Aligned_cols=43 Identities=23% Similarity=0.602 Sum_probs=29.8
Q ss_pred CCCcceecCcCccCCccceEEe--cCCcHhhHHHHHHHHhh---cCCCCCCccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEMEKH---YRYTCPVCSK 56 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~~~~---~~~~CP~Cr~ 56 (136)
++..|.||.+. .. +++ .|.-.||..|+..-+.. +.-.||.|++
T Consensus 10 ~~~~C~vC~~~-----g~-ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 10 HQDYCEVCQQG-----GE-IILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp CCSSCTTTSCC-----SS-EEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CCCCCccCCCC-----Cc-EEECCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 45789999874 12 222 78899999999864332 3456999964
No 84
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=79.87 E-value=0.43 Score=27.34 Aligned_cols=43 Identities=23% Similarity=0.478 Sum_probs=27.4
Q ss_pred cceecCcCccCCccceEEe--cCCcHhhHHHHHHHHhh---cCCCCCCccc
Q 032682 11 FYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEMEKH---YRYTCPVCSK 56 (136)
Q Consensus 11 ~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~~~~---~~~~CP~Cr~ 56 (136)
.|.||.+. -+ ...+++ .|.-.||..|+..=+.. +.-.||.|+.
T Consensus 2 ~C~vC~~~-~~--~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKK-GE--DDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCS-SC--CSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCC-CC--CCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 58888865 21 122223 78899999999653322 3456999964
No 85
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=78.07 E-value=1.6 Score=35.50 Aligned_cols=47 Identities=13% Similarity=0.241 Sum_probs=33.8
Q ss_pred CcceecCcCccCCccceEEecCCcH--hhHHHHHHHHhh-cCCCCCCcccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVLRCGHT--IHLECLKEMEKH-YRYTCPVCSKSLW 59 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L~CgH~--fh~~Cl~~~~~~-~~~~CP~Cr~~~~ 59 (136)
..||+-...| ..+.+...|.|. |-..-+.++... ....||+|.+.+.
T Consensus 250 L~CPlS~~ri---~~PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~ 299 (371)
T 3i2d_A 250 LQCPISYTRM---KYPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIA 299 (371)
T ss_dssp SBCTTTSSBC---SSEEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCC
T ss_pred ecCCCccccc---cccCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccC
Confidence 6799888875 356677799998 666666555433 4567999998873
No 86
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=76.44 E-value=1.9 Score=34.96 Aligned_cols=47 Identities=19% Similarity=0.376 Sum_probs=34.2
Q ss_pred CcceecCcCccCCccceEEecCCcH--hhHHHHHHHHhh-cCCCCCCcccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVLRCGHT--IHLECLKEMEKH-YRYTCPVCSKSLW 59 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L~CgH~--fh~~Cl~~~~~~-~~~~CP~Cr~~~~ 59 (136)
..||+-...| ..+.+...|.|. |-..-+.++... ..-.||+|.+.+.
T Consensus 216 L~CPlS~~ri---~~P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~ 265 (360)
T 4fo9_A 216 LMCPLGKMRL---TIPCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAA 265 (360)
T ss_dssp SBCTTTCSBC---SSEEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCC
T ss_pred eeCCCcccee---ccCCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccC
Confidence 5699888875 356677799998 766666665443 4567999998874
No 87
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=75.77 E-value=1.1 Score=29.11 Aligned_cols=34 Identities=24% Similarity=0.448 Sum_probs=24.5
Q ss_pred CCCCCCcceecCcCccCCccceEEe---cCCcHhhHHHHHHH
Q 032682 5 LNVNDNFYNFGLQFIFDTMKDITVL---RCGHTIHLECLKEM 43 (136)
Q Consensus 5 ~~~~~~~CpIC~e~lf~~~~~~~~L---~CgH~fh~~Cl~~~ 43 (136)
-..+|..|.||-.. ++.. .+ -|+-+||..||++.
T Consensus 11 ~~~~D~~C~VC~~~--t~~~---l~pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 11 PVVNDEMCDVCEVW--TAES---LFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCCCSCCCTTTCCC--CSSC---CSSCSSSSSCCCHHHHHHH
T ss_pred CCCCCcccCccccc--cccc---eeccccccccccHhhcccc
Confidence 34588999999854 1111 13 47999999999996
No 88
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=74.92 E-value=0.34 Score=30.03 Aligned_cols=46 Identities=17% Similarity=0.292 Sum_probs=30.4
Q ss_pred CcceecCcCccCCccceEEe--cCCcHhhHHHHHHHHhh---cCCCCCCccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEMEKH---YRYTCPVCSKSL 58 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~~~~---~~~~CP~Cr~~~ 58 (136)
..|+||... .+ ...+++ .|.--||..|+.--... ..+.||.|+..+
T Consensus 19 ~~C~~C~~~-~~--~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 19 WICPGCNKP-DD--GSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKI 69 (75)
T ss_dssp ECBTTTTBC-CS--SCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHH
T ss_pred cCCCCCCCC-CC--CCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCch
Confidence 459999887 22 222333 78899999998653322 357799996543
No 89
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=72.70 E-value=0.79 Score=27.54 Aligned_cols=49 Identities=14% Similarity=0.339 Sum_probs=31.5
Q ss_pred CCCCcceecCcCccCCccceEEe--cCCcHhhHHHHHHHH------hhcCCCCCCccc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEME------KHYRYTCPVCSK 56 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~~------~~~~~~CP~Cr~ 56 (136)
.++..|.||... .+.....+++ .|.-.||..|+..-+ ..+.-.||.|..
T Consensus 4 ~~~~~C~vC~~~-~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~ 60 (66)
T 2yt5_A 4 GSSGVCTICQEE-YSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVF 60 (66)
T ss_dssp CCCCCBSSSCCC-CCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHH
T ss_pred CCCCCCCCCCCC-CCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcC
Confidence 456789999976 3222233434 788999999987522 123456888853
No 90
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=72.44 E-value=2 Score=23.01 Aligned_cols=16 Identities=38% Similarity=0.794 Sum_probs=12.1
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.||+|.+.+.....
T Consensus 5 GFiCP~C~~~l~s~~~ 20 (34)
T 3mjh_B 5 GFICPQCMKSLGSADE 20 (34)
T ss_dssp EEECTTTCCEESSHHH
T ss_pred ccCCcHHHHHcCCHHH
Confidence 4779999999876443
No 91
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=71.81 E-value=2 Score=38.96 Aligned_cols=46 Identities=17% Similarity=0.113 Sum_probs=39.1
Q ss_pred CCcceecCcCccCCccceEEecCC-cHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCG-HTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~Cg-H~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
...|||-++.| ++|++++-| ++|-+..|++|+.. +.+||.=|..+.
T Consensus 891 ~F~cPIs~~lM----~DPVilpsG~~TydR~~I~~wl~~-~~tdP~Tr~~L~ 937 (968)
T 3m62_A 891 EFLDPLMYTIM----KDPVILPASKMNIDRSTIKAHLLS-DSTDPFNRMPLK 937 (968)
T ss_dssp GGBCTTTCSBC----SSEEECTTTCCEEEHHHHHHHHTT-CCBCTTTCCBCC
T ss_pred HhCCcchhhHH----hCCeEcCCCCEEECHHHHHHHHhc-CCCCCCCCCCCC
Confidence 46799999995 789999998 69999999999985 678998877764
No 92
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=67.87 E-value=0.29 Score=29.45 Aligned_cols=48 Identities=17% Similarity=0.325 Sum_probs=30.2
Q ss_pred CCCCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhh---cCCCCCCcccc
Q 032682 6 NVNDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKH---YRYTCPVCSKS 57 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~---~~~~CP~Cr~~ 57 (136)
..++..|.||.+. ..-+.--.|.-.||..|+..-+.. +.-.||.|+..
T Consensus 6 d~~~~~C~vC~~~----g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 6 DHHMEFCRVCKDG----GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp CSSCSSCTTTCCC----SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred cCCCCcCCCCCCC----CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 4466789999864 111111168899999998753332 34569999654
No 93
>2g45_A Ubiquitin carboxyl-terminal hydrolase 5; zinc finger, hydrolase; 1.99A {Homo sapiens} SCOP: g.44.1.5 PDB: 2g43_A 2l80_A
Probab=67.80 E-value=0.8 Score=31.80 Aligned_cols=25 Identities=16% Similarity=0.309 Sum_probs=18.9
Q ss_pred ccCCCCCCCCccchhhhhhcCCC--CCCcc
Q 032682 88 ILCNDCGANSHVQFHVIAHKCLS--CKSYN 115 (136)
Q Consensus 88 i~C~~C~~~~~~~~h~~~~kC~~--C~syn 115 (136)
..|..|....+. |+.+.|.+ |+.|.
T Consensus 35 ~~C~~C~~~~~L---wlCL~CG~vgCgr~~ 61 (129)
T 2g45_A 35 WKCSKCDMRENL---WLNLTDGSILCGRRY 61 (129)
T ss_dssp CCCSSSSCCSSE---EEETTTCCEEECCBC
T ss_pred CcCccccCcCce---EEeccCCccccCccc
Confidence 469999987544 78899987 77664
No 94
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=66.94 E-value=3.8 Score=25.25 Aligned_cols=49 Identities=14% Similarity=0.288 Sum_probs=31.1
Q ss_pred CCCCCcceecCcCccCCccceEEe--cCCcHhhHHHHHHHH-hhcCCCCCCcc
Q 032682 6 NVNDNFYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEME-KHYRYTCPVCS 55 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~~-~~~~~~CP~Cr 55 (136)
..++..|.||.+. .+......++ .|.-.||..|+..-. ..+.-.||.|+
T Consensus 13 ~~~~~~C~vC~~~-~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~ 64 (71)
T 2ku3_A 13 IDEDAVCSICMDG-ESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCL 64 (71)
T ss_dssp CCSSCSCSSSCCC-CCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHH
T ss_pred CCCCCCCCCCCCC-CCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCc
Confidence 3456889999876 2112233334 788999999986421 12345688885
No 95
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=66.50 E-value=0.41 Score=28.70 Aligned_cols=48 Identities=19% Similarity=0.276 Sum_probs=29.2
Q ss_pred CCCcceecCcCccCCccceEE-ecCCcHhhHHHHHHHHh----hcCCCCCCccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITV-LRCGHTIHLECLKEMEK----HYRYTCPVCSK 56 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~-L~CgH~fh~~Cl~~~~~----~~~~~CP~Cr~ 56 (136)
++..|+||... ++.....+. -.|..=||..|+.--.. ...+.||.|+.
T Consensus 5 e~~~C~~C~~~-~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 57 (64)
T 1we9_A 5 SSGQCGACGES-YAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSN 57 (64)
T ss_dssp SCCCCSSSCCC-CCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHT
T ss_pred CCCCCCCCCCc-cCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcC
Confidence 45779999988 432222221 16778889888753221 13577888854
No 96
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=65.55 E-value=0.91 Score=33.30 Aligned_cols=50 Identities=20% Similarity=0.392 Sum_probs=32.1
Q ss_pred CCcceecCcCccCCccc-eEEe---cCCcHhhHHHHHHH------Hh----hcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKD-ITVL---RCGHTIHLECLKEM------EK----HYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~-~~~L---~CgH~fh~~Cl~~~------~~----~~~~~CP~Cr~~~~ 59 (136)
...||||... ++.... ...+ .|..-||..|..-- +. ...+.||.|+..-.
T Consensus 2 G~~CpiC~k~-Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 2 GNFCPLCDKC-YDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp CCBCTTTCCB-CTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred cCcCCCCcCc-cCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 4679999988 443321 1223 57888999997321 11 12689999987654
No 97
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=65.48 E-value=3.6 Score=21.06 Aligned_cols=16 Identities=31% Similarity=0.727 Sum_probs=12.2
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.||+|+..+++...
T Consensus 3 k~~CpvCk~q~Pd~kt 18 (28)
T 2jvx_A 3 DFCCPKCQYQAPDMDT 18 (28)
T ss_dssp CEECTTSSCEESSHHH
T ss_pred cccCccccccCcChHH
Confidence 4679999988877544
No 98
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=65.31 E-value=0.17 Score=30.28 Aligned_cols=45 Identities=22% Similarity=0.554 Sum_probs=30.3
Q ss_pred CCCCcceecCcCccCCccceEE-ecCCcHhhHHHHHHHHhh---cCCCCCCccc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITV-LRCGHTIHLECLKEMEKH---YRYTCPVCSK 56 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~-L~CgH~fh~~Cl~~~~~~---~~~~CP~Cr~ 56 (136)
.++..|.||.+. ...+. -.|.-.||..|+..-+.. +.-.||.|..
T Consensus 3 ~~~~~C~vC~~~-----g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~ 51 (60)
T 2puy_A 3 IHEDFCSVCRKS-----GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 51 (60)
T ss_dssp CCCSSCTTTCCC-----SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHH
T ss_pred CCCCCCcCCCCC-----CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccC
Confidence 567889999875 12211 278899999999753332 3456999954
No 99
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=65.20 E-value=3 Score=27.95 Aligned_cols=42 Identities=17% Similarity=0.407 Sum_probs=25.1
Q ss_pred CCCCCcceecCcCccCCccceEEe---cCCcHhhHHHHHHHHhh---cCCCCCCc
Q 032682 6 NVNDNFYNFGLQFIFDTMKDITVL---RCGHTIHLECLKEMEKH---YRYTCPVC 54 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~~~~~~~L---~CgH~fh~~Cl~~~~~~---~~~~CP~C 54 (136)
..++..|.+|.+. .+.+.= .|--.||..|+. +.. +.-.||.|
T Consensus 12 ~~~~~~C~~C~~~-----G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c 59 (107)
T 4gne_A 12 QMHEDYCFQCGDG-----GELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWH 59 (107)
T ss_dssp CSSCSSCTTTCCC-----SEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGG
T ss_pred CCCCCCCCcCCCC-----CcEeEECCCCCCcccccccCc--CCcCCCCCEECCCC
Confidence 4566789999854 222221 266889999986 332 23346655
No 100
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=64.67 E-value=0.72 Score=34.02 Aligned_cols=46 Identities=17% Similarity=0.387 Sum_probs=31.6
Q ss_pred CCCCCcceecCcCccCCccceEEe--cCCcHhhHHHHHHHHhh---cCCCCCCcccc
Q 032682 6 NVNDNFYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEMEKH---YRYTCPVCSKS 57 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~~~~---~~~~CP~Cr~~ 57 (136)
..++..|.||.+. .+ .++ .|...||..|+..-+.. +.-.||.|+..
T Consensus 4 d~~~~~C~~C~~~-----g~-ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~ 54 (207)
T 3u5n_A 4 DPNEDWCAVCQNG-----GD-LLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDI 54 (207)
T ss_dssp CSSCSSBTTTCCC-----EE-EEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCS
T ss_pred CCCCCCCCCCCCC-----Cc-eEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCc
Confidence 3456789999865 12 223 68899999998664432 34679999754
No 101
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=64.55 E-value=0.54 Score=33.99 Aligned_cols=45 Identities=16% Similarity=0.378 Sum_probs=30.5
Q ss_pred CCCcceecCcCccCCccceEE-ecCCcHhhHHHHHHHHhh---cCCCCCCcccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITV-LRCGHTIHLECLKEMEKH---YRYTCPVCSKS 57 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~-L~CgH~fh~~Cl~~~~~~---~~~~CP~Cr~~ 57 (136)
++..|.||.+. .. ... =.|.-.||..|+..-+.. +.-.||.|+..
T Consensus 3 ~~~~C~~C~~~----g~-ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~ 51 (184)
T 3o36_A 3 NEDWCAVCQNG----GE-LLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDL 51 (184)
T ss_dssp SCSSCTTTCCC----SS-CEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCS
T ss_pred CCCccccCCCC----Ce-eeecCCCCcccCccccCCCCCCCCCCCEECccccCc
Confidence 56789999865 22 211 168899999998664432 34669999754
No 102
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=63.59 E-value=5.8 Score=25.36 Aligned_cols=48 Identities=15% Similarity=0.344 Sum_probs=30.3
Q ss_pred CCCcceecCcCccCCccceEEe--cCCcHhhHHHHHHHH-hhcCCCCCCccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEME-KHYRYTCPVCSK 56 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~~-~~~~~~CP~Cr~ 56 (136)
++..|.||.+. .......+++ .|.-.||..|+..-. ..+.-.||.|..
T Consensus 24 ~~~~C~vC~~~-~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~ 74 (88)
T 2l43_A 24 EDAVCSICMDG-ESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQ 74 (88)
T ss_dssp CCCCCSSCCSS-SSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHH
T ss_pred CCCcCCcCCCC-CCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccC
Confidence 56789999976 2112223333 778899999986432 123456888853
No 103
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.50 E-value=1.1 Score=28.33 Aligned_cols=46 Identities=17% Similarity=0.395 Sum_probs=28.6
Q ss_pred CCCcceecCcCccCCccceEEe--cCCcHhhHHHHHHHHhh---c-CCCCCCccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEMEKH---Y-RYTCPVCSK 56 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~~~~---~-~~~CP~Cr~ 56 (136)
++-.|.||... -+ ....++ .|...||..|+..-+.. + .-.||.|..
T Consensus 25 ~~c~C~vC~~~-~~--~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 25 HSCSCRVCGGK-HE--PNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSSSCSSSCCC-CC--STTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCCCcCcCCc-CC--CCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 34478888864 11 222333 78899999999753332 2 456888854
No 104
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=60.95 E-value=9.1 Score=25.28 Aligned_cols=48 Identities=27% Similarity=0.428 Sum_probs=28.6
Q ss_pred CCCCcceecCcCccCC---cc-ceEEe--cCCcHhhHHHHHH------HHhhcCCCCCCcc
Q 032682 7 VNDNFYNFGLQFIFDT---MK-DITVL--RCGHTIHLECLKE------MEKHYRYTCPVCS 55 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~---~~-~~~~L--~CgH~fh~~Cl~~------~~~~~~~~CP~Cr 55 (136)
.....|.+|+.. -+. .. ...+. .|+..||..||.. .+....-.||.|+
T Consensus 3 ~p~~~C~~C~~~-~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 3 EPIPICSFCLGT-KEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CCCSSBTTTCCC-TTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred ccCccccccCCc-hhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 356789999875 111 11 11222 7899999999952 2222445688774
No 105
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.25 E-value=0.35 Score=31.54 Aligned_cols=47 Identities=17% Similarity=0.330 Sum_probs=30.7
Q ss_pred CCCCCcceecCcCccCCccceEEe--cCCcHhhHHHHHHHHhh---cCCCCCCcc
Q 032682 6 NVNDNFYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEMEKH---YRYTCPVCS 55 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~~~~---~~~~CP~Cr 55 (136)
-.++..|.||... -+ ...+++ .|...||..|+..-+.. +.-.||.|.
T Consensus 13 ~~~~~~C~vC~~~-~~--~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~ 64 (92)
T 2e6r_A 13 FIDSYICQVCSRG-DE--DDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCI 64 (92)
T ss_dssp CCCCCCCSSSCCS-GG--GGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHH
T ss_pred ccCCCCCccCCCc-CC--CCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCc
Confidence 3456789999976 21 222333 78899999999743222 345699995
No 106
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=58.67 E-value=1.4 Score=28.48 Aligned_cols=10 Identities=40% Similarity=1.215 Sum_probs=8.6
Q ss_pred CCCCCccccc
Q 032682 49 YTCPVCSKSL 58 (136)
Q Consensus 49 ~~CP~Cr~~~ 58 (136)
.+||+|.+++
T Consensus 9 ~~~PlCG~~L 18 (95)
T 2k5c_A 9 AKCPICGSPL 18 (95)
T ss_dssp EECSSSCCEE
T ss_pred ccCCcCCCcc
Confidence 5699999887
No 107
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.51 E-value=0.31 Score=28.66 Aligned_cols=45 Identities=22% Similarity=0.510 Sum_probs=29.1
Q ss_pred CCCCCcceecCcCccCCccceEE-ecCCcHhhHHHHHHHHhh---cCCCCCCcc
Q 032682 6 NVNDNFYNFGLQFIFDTMKDITV-LRCGHTIHLECLKEMEKH---YRYTCPVCS 55 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~~~~~~~-L~CgH~fh~~Cl~~~~~~---~~~~CP~Cr 55 (136)
..++..|.||.+. ...+. -.|.-.||..|+..-+.. +.-.||.|.
T Consensus 6 ~~~~~~C~vC~~~-----g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~ 54 (56)
T 2yql_A 6 SGHEDFCSVCRKS-----GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 54 (56)
T ss_dssp CSSCCSCSSSCCS-----SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHH
T ss_pred CCCCCCCccCCCC-----CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhh
Confidence 3466789999875 12211 278899999998753322 344588875
No 108
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=58.16 E-value=2.2 Score=26.35 Aligned_cols=30 Identities=13% Similarity=0.227 Sum_probs=23.9
Q ss_pred CCcceecCcCccCCccceEEecC-CcHhhHHHHHHH
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRC-GHTIHLECLKEM 43 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~C-gH~fh~~Cl~~~ 43 (136)
..-|-||.+. ..++-+.| |-.||.+|+.+.
T Consensus 8 ~pWC~ICneD-----AtlrC~gCdgDLYC~rC~rE~ 38 (67)
T 2d8v_A 8 LPWCCICNED-----ATLRCAGCDGDLYCARCFREG 38 (67)
T ss_dssp CSSCTTTCSC-----CCEEETTTTSEEECSSHHHHH
T ss_pred CCeeEEeCCC-----CeEEecCCCCceehHHHHHHH
Confidence 3569999987 34666788 899999998876
No 109
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=57.78 E-value=7.4 Score=24.11 Aligned_cols=49 Identities=18% Similarity=0.287 Sum_probs=29.8
Q ss_pred CCCcceecCcCccCCccceEE-ecCCcHhhHHHHHHHHh----hcCCCCCCccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITV-LRCGHTIHLECLKEMEK----HYRYTCPVCSKSL 58 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~-L~CgH~fh~~Cl~~~~~----~~~~~CP~Cr~~~ 58 (136)
....| ||... ++.....+. -.|..=||..|+.--.. ...+.||.|+...
T Consensus 11 ~~~~C-~C~~~-~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 11 VPVYC-LCRQP-YNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCS-TTSCS-CCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CccEE-EcCCc-cCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 44567 89887 432222221 16888999999853211 1467899997553
No 110
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=57.33 E-value=1.4 Score=28.62 Aligned_cols=47 Identities=15% Similarity=0.379 Sum_probs=30.9
Q ss_pred CCCCCcceecCcCccCCccceEE-ecCCcHhhHHHHHHHHhh---cCCCCCCcccc
Q 032682 6 NVNDNFYNFGLQFIFDTMKDITV-LRCGHTIHLECLKEMEKH---YRYTCPVCSKS 57 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~~~~~~~-L~CgH~fh~~Cl~~~~~~---~~~~CP~Cr~~ 57 (136)
..++..|.||.+. . +... -.|.-.||..|+..-+.. +.-.||.|...
T Consensus 22 d~n~~~C~vC~~~----g-~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 22 DDSATICRVCQKP----G-DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SSSSSCCSSSCSS----S-CCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred CCCCCcCcCcCCC----C-CEEECCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 3456789999875 1 2211 167889999999664432 34569999643
No 111
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=56.07 E-value=23 Score=21.62 Aligned_cols=15 Identities=33% Similarity=0.855 Sum_probs=11.1
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.+....
T Consensus 45 ~~~C~~C~~~f~~~~ 59 (106)
T 2ee8_A 45 PYTCDICHKAFRRQD 59 (106)
T ss_dssp CCBCSSSCCBCSCHH
T ss_pred CcCCCCccchhCCHH
Confidence 477999988886543
No 112
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=55.66 E-value=1.9 Score=30.03 Aligned_cols=51 Identities=12% Similarity=0.204 Sum_probs=31.3
Q ss_pred CCCCcceecCcCc-cCCccceEEecCCcHhhHHHHHHHHhh---cCCCCCCcccc
Q 032682 7 VNDNFYNFGLQFI-FDTMKDITVLRCGHTIHLECLKEMEKH---YRYTCPVCSKS 57 (136)
Q Consensus 7 ~~~~~CpIC~e~l-f~~~~~~~~L~CgH~fh~~Cl~~~~~~---~~~~CP~Cr~~ 57 (136)
.++..|.+|...+ |.......-..|.|.+|.+|-...-.. ..-.|-+|++.
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k~ 107 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQ 107 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHH
T ss_pred CCCccccccCCCcccccCCCCCCCCCCcccccccCCccCCCCCccceechhhHHH
Confidence 4568899999996 333334444589999999984322000 11237777654
No 113
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=55.57 E-value=0.94 Score=28.62 Aligned_cols=43 Identities=19% Similarity=0.372 Sum_probs=25.9
Q ss_pred cceecCcCccCCccceEEe--cCCcHhhHHHHHHHHhh---cC-CCCCCccc
Q 032682 11 FYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEMEKH---YR-YTCPVCSK 56 (136)
Q Consensus 11 ~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~~~~---~~-~~CP~Cr~ 56 (136)
.|.||... - .....++ .|...||..|+..-+.. +. -.||.|+.
T Consensus 28 ~C~vC~~~-~--d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGR-Q--DPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCC-S--CGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCC-C--CCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 46666654 1 1223333 68899999999764433 23 57988864
No 114
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=53.81 E-value=9.9 Score=26.25 Aligned_cols=46 Identities=11% Similarity=0.252 Sum_probs=30.4
Q ss_pred CCCCcceecCcCccCCccceEE-ecCCcHhhHHHHHHHH-----h-----hcCCCCCCcccc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITV-LRCGHTIHLECLKEME-----K-----HYRYTCPVCSKS 57 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~-L~CgH~fh~~Cl~~~~-----~-----~~~~~CP~Cr~~ 57 (136)
.++..|.||.+. .++.. =.|-..||..|+..-+ . .+.-.|+.|+-.
T Consensus 55 g~~~~C~vC~dG-----G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 55 GMDEQCRWCAEG-----GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp SCBSSCTTTCCC-----SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCCcCeecCCC-----CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 455679999875 22211 1788999999998642 1 234679999643
No 115
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=53.66 E-value=0.43 Score=29.04 Aligned_cols=44 Identities=18% Similarity=0.363 Sum_probs=29.1
Q ss_pred CCCCcceecCcCccCCccceEE-ecCCcHhhHHHHHHHHhh---cCCCCCCcc
Q 032682 7 VNDNFYNFGLQFIFDTMKDITV-LRCGHTIHLECLKEMEKH---YRYTCPVCS 55 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~~~-L~CgH~fh~~Cl~~~~~~---~~~~CP~Cr 55 (136)
.++..|.||.+. ...+. -.|.-.||..|+..-+.. +.-.||.|.
T Consensus 6 ~~~~~C~vC~~~-----g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~ 53 (66)
T 1xwh_A 6 KNEDECAVCRDG-----GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCL 53 (66)
T ss_dssp SCCCSBSSSSCC-----SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHH
T ss_pred CCCCCCccCCCC-----CCEEEcCCCChhhcccccCCCcCcCCCCCeECcccc
Confidence 366889999875 12211 178899999998753322 345699885
No 116
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=53.03 E-value=4.4 Score=26.38 Aligned_cols=45 Identities=18% Similarity=0.346 Sum_probs=29.1
Q ss_pred CcceecCcCccCCccceEEe--cCCcHhhHHHHHHHHhh--cCCCCCCccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEMEKH--YRYTCPVCSKSL 58 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~~~~--~~~~CP~Cr~~~ 58 (136)
..| ||... .+ ...++. .|.--||..|+..-... ..+.||.|+..-
T Consensus 29 vrC-iC~~~-~~--~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~~~ 77 (98)
T 2lv9_A 29 TRC-ICGFT-HD--DGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQPRN 77 (98)
T ss_dssp CCC-TTSCC-SC--SSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSSSC
T ss_pred EEe-ECCCc-cC--CCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcCCC
Confidence 457 88776 32 233333 78899999998643221 357899997543
No 117
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=52.00 E-value=0.92 Score=33.17 Aligned_cols=46 Identities=13% Similarity=0.319 Sum_probs=29.9
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhh---cCCCCCCcccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKH---YRYTCPVCSKS 57 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~---~~~~CP~Cr~~ 57 (136)
++..|.+|.+. ..-+.--.|.-.||..|+..-+.. +.-.||.|+..
T Consensus 1 s~~~C~~C~~~----g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 1 SATICRVCQKP----GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CCCCBTTTCCC----SSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred CCCcCccCCCC----CceeECCCCCchhccccCCCCcccCCCCCCCCcCccCC
Confidence 45789999865 221111267899999999653322 34569999744
No 118
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=50.98 E-value=1.5 Score=27.00 Aligned_cols=43 Identities=19% Similarity=0.378 Sum_probs=26.1
Q ss_pred cceecCcCccCCccceEEe--cCCcHhhHHHHHHHHhh---c-CCCCCCccc
Q 032682 11 FYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEMEKH---Y-RYTCPVCSK 56 (136)
Q Consensus 11 ~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~~~~---~-~~~CP~Cr~ 56 (136)
.|.||... - ....+++ .|...||..|+..-+.. + .-.||.|+.
T Consensus 20 ~C~~C~~~-~--~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGR-Q--DPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCC-S--CGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCc-C--CCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 46677754 1 1223333 68899999999753332 2 456888864
No 119
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=50.82 E-value=3 Score=26.69 Aligned_cols=48 Identities=17% Similarity=0.263 Sum_probs=31.1
Q ss_pred CCcceecCcCccCCccceEEe--cCCcHhhHHHHHHHHh-------hcCCCCCCcccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEMEK-------HYRYTCPVCSKS 57 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~~~-------~~~~~CP~Cr~~ 57 (136)
+..|.||... .+.....+++ .|...||..|+..-+. .+.-.|+.|...
T Consensus 16 ~~~C~vC~~~-~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~ 72 (88)
T 1wev_A 16 GLACVVCRQM-TVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQ 72 (88)
T ss_dssp CCSCSSSCCC-CCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHH
T ss_pred CCcCCCCCCC-CCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccch
Confidence 4579999976 2211233444 7899999999975332 134569999644
No 120
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=50.29 E-value=7.7 Score=23.16 Aligned_cols=41 Identities=15% Similarity=0.188 Sum_probs=27.7
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
....|+.|.+.+......+ ..=|..||..| ++|-.|++.+.
T Consensus 10 ~~~~C~~C~~~I~~~~~~~--~a~~~~~H~~C---------F~C~~C~~~L~ 50 (77)
T 1g47_A 10 ASATCERCKGGFAPAEKIV--NSNGELYHEQC---------FVCAQCFQQFP 50 (77)
T ss_dssp CCCBCSSSCCBCCSTTTCE--EETTEEECTTT---------CCCTTTCCCCG
T ss_pred CCCCchhcCCccCCCceEE--EeCccEecccc---------CeECCCCCCCC
Confidence 4478999999865322222 23477888776 57889988774
No 121
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=49.91 E-value=5.1 Score=24.55 Aligned_cols=34 Identities=12% Similarity=0.177 Sum_probs=23.1
Q ss_pred CCCCcceecCcCccCCccce-EEecCCcHhhHHHHH
Q 032682 7 VNDNFYNFGLQFIFDTMKDI-TVLRCGHTIHLECLK 41 (136)
Q Consensus 7 ~~~~~CpIC~e~lf~~~~~~-~~L~CgH~fh~~Cl~ 41 (136)
+++..|.+|... |.....- .--.||..||..|..
T Consensus 9 ~~~~~C~~C~~~-F~~~~RrHHCR~CG~v~C~~Cs~ 43 (73)
T 1vfy_A 9 IDSDACMICSKK-FSLLNRKHHCRSCGGVFCQEHSS 43 (73)
T ss_dssp CCCSBCTTTCCB-CBTTBCCEECTTTCCEECGGGSC
T ss_pred ccCCcccCCCCc-cCCccccccCCCCCEEEcccccC
Confidence 345799999998 5443322 223789999988853
No 122
>3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens}
Probab=49.80 E-value=2.9 Score=37.20 Aligned_cols=66 Identities=12% Similarity=0.186 Sum_probs=27.0
Q ss_pred ecCCcHhhHHHHHHHHhhcCCCCCCcccccchhhhHHHhhHHHHhcCCCChhhhcccccccCCCCCCCCccchhhhhhcC
Q 032682 29 LRCGHTIHLECLKEMEKHYRYTCPVCSKSLWDMSKLWSKIDQEIASTPMPAMYQNKMVWILCNDCGANSHVQFHVIAHKC 108 (136)
Q Consensus 29 L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~i~C~~C~~~~~~~~h~~~~kC 108 (136)
|...+.++..++..|-. ..||+|+... .|.+......+++ ....|..|....+. |+.+.|
T Consensus 174 ~~~~~~~~~~~~~~w~~---~~~~~c~h~~--------~~~~~~~~~~~~~------~~~~C~~c~~~~~l---w~CL~C 233 (854)
T 3ihp_A 174 LSADSASRKQEVQAWDG---EVRQVSKHAF--------SLKQLDNPARIPP------CGWKCSKCDMRENL---WLNLTD 233 (854)
T ss_dssp TC-------------------CCCBCTTTT--------TCCCCSSCCCCCS------SCCCCSSSCCCSSE---EEETTT
T ss_pred HhcCCHHHHHHHHhhcC---ccCCCCcCcc--------ccccccccccCCC------CCCcCcCcCCcCce---EEEecC
Confidence 45667889999999943 4588886542 1111000111111 13569999987644 788888
Q ss_pred CC--CCCc
Q 032682 109 LS--CKSY 114 (136)
Q Consensus 109 ~~--C~sy 114 (136)
.+ ||.+
T Consensus 234 g~vgC~r~ 241 (854)
T 3ihp_A 234 GSILCGRR 241 (854)
T ss_dssp CCEEECCB
T ss_pred CCcccccc
Confidence 85 7644
No 123
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=49.51 E-value=3 Score=25.73 Aligned_cols=45 Identities=22% Similarity=0.445 Sum_probs=28.1
Q ss_pred CCcceecCcCccCCccceEEe--cCCcHhhHHHHHHHH--------hhcCCCCCCcccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEME--------KHYRYTCPVCSKS 57 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~~--------~~~~~~CP~Cr~~ 57 (136)
...| ||... .+. ..++- .|..=||..|+.--. ....+.||.|+..
T Consensus 16 ~~~C-~C~~~-~~~--~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~ 70 (76)
T 1wem_A 16 ALYC-ICRQP-HNN--RFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp CCCS-TTCCC-CCS--SCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCEE-ECCCc-cCC--CCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCc
Confidence 3568 89887 332 22222 688899999984211 1246889999643
No 124
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=49.31 E-value=5.2 Score=24.60 Aligned_cols=42 Identities=19% Similarity=0.442 Sum_probs=26.6
Q ss_pred CCcceecCcCccCCccceEEe--c--CC-cHhhHHHHHHHHhh---cCCCCCCcccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVL--R--CG-HTIHLECLKEMEKH---YRYTCPVCSKS 57 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L--~--Cg-H~fh~~Cl~~~~~~---~~~~CP~Cr~~ 57 (136)
...| ||.+. .. ..++. . |. .-||..|+. +.. +.+.||.|+..
T Consensus 16 ~~~C-~C~~~-~~---g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~ 65 (71)
T 1wen_A 16 PTYC-LCHQV-SY---GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 65 (71)
T ss_dssp CCCS-TTCCC-SC---SSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSC
T ss_pred CCEE-ECCCC-CC---CCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCcc
Confidence 3567 89886 22 22322 4 55 689999987 222 45779999654
No 125
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=49.26 E-value=24 Score=20.27 Aligned_cols=16 Identities=31% Similarity=0.740 Sum_probs=11.3
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|+.|.+.+.....
T Consensus 29 ~~~C~~C~~~f~~~~~ 44 (82)
T 2kmk_A 29 PYPCQYCGKRFHQKSD 44 (82)
T ss_dssp CEECSSSCCEESSHHH
T ss_pred CeeCCcCChhhCCHHH
Confidence 4679999888765443
No 126
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=48.65 E-value=4.5 Score=26.95 Aligned_cols=45 Identities=24% Similarity=0.525 Sum_probs=26.0
Q ss_pred CcceecCcCccCC-----ccceEE-ecCCcHhhHHHHHHH------HhhcCCCCCCc
Q 032682 10 NFYNFGLQFIFDT-----MKDITV-LRCGHTIHLECLKEM------EKHYRYTCPVC 54 (136)
Q Consensus 10 ~~CpIC~e~lf~~-----~~~~~~-L~CgH~fh~~Cl~~~------~~~~~~~CP~C 54 (136)
..|.||+..-..+ ..+.+. -.|+..||..|+... +....-.||.|
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 58 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIEC 58 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGG
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCcccc
Confidence 5699998762111 012211 278999999998642 22234556666
No 127
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=47.76 E-value=5.3 Score=29.76 Aligned_cols=37 Identities=16% Similarity=0.237 Sum_probs=23.4
Q ss_pred CCCCCCCCcceecCcCccCCccc-eEEecCCcHhhHHHHH
Q 032682 3 PELNVNDNFYNFGLQFIFDTMKD-ITVLRCGHTIHLECLK 41 (136)
Q Consensus 3 ~~~~~~~~~CpIC~e~lf~~~~~-~~~L~CgH~fh~~Cl~ 41 (136)
|.|. ++..|.+|... |..... -.--.||+.||..|-.
T Consensus 159 p~W~-~~~~C~~C~~~-F~~~~RrhHCR~CG~v~C~~Cs~ 196 (226)
T 3zyq_A 159 PDWV-DAEECHRCRVQ-FGVMTRKHHCRACGQIFCGKCSS 196 (226)
T ss_dssp CCCC-CCSBCTTTCCB-CBTTBCCEECTTTCCEECTTTCC
T ss_pred cccc-cCCCCcCcCCC-CCccccccccCCCcCEeChhhcC
Confidence 4443 45689999988 544332 2334788888888843
No 128
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=46.77 E-value=6.2 Score=23.26 Aligned_cols=39 Identities=15% Similarity=0.244 Sum_probs=26.6
Q ss_pred CcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
..|+.|.+.+.... .++..=|..||..| ++|-.|++.+.
T Consensus 6 ~~C~~C~~~I~~~~--~~~~a~~~~~H~~C---------F~C~~C~~~L~ 44 (72)
T 1x4k_A 6 SGCQECKKTIMPGT--RKMEYKGSSWHETC---------FICHRCQQPIG 44 (72)
T ss_dssp CCBSSSCCCCCSSS--CEEEETTEEEETTT---------TCCSSSCCCCC
T ss_pred CCCccCCCcccCCc--eEEEECcCeecccC---------CcccccCCccC
Confidence 57999999864321 22234578888776 57889987764
No 129
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=46.66 E-value=4.6 Score=27.58 Aligned_cols=51 Identities=16% Similarity=0.269 Sum_probs=28.0
Q ss_pred CCCCCCCCcceecCcCccCCccce-EEecCCcHhhHHHHHHHHhhcCCCCCCcc
Q 032682 3 PELNVNDNFYNFGLQFIFDTMKDI-TVLRCGHTIHLECLKEMEKHYRYTCPVCS 55 (136)
Q Consensus 3 ~~~~~~~~~CpIC~e~lf~~~~~~-~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr 55 (136)
|-...+...|..|... |.....- .--.||..||..|...... ....|-.|-
T Consensus 13 ~~Pd~~~~~C~~C~~~-Fs~~~RkHHCR~CG~ifC~~Cs~~~~~-~vRVC~~C~ 64 (120)
T 1y02_A 13 PSPTGLEPSCKSCGAH-FANTARKQTCLDCKKNFCMTCSSQVGN-GPRLCLLCQ 64 (120)
T ss_dssp -------CCCTTTCCC-CSSGGGCEECTTTCCEECGGGEEC-----CCEEHHHH
T ss_pred CcCccccCcccCcCCc-cccccccccCCCCCCeeCHHHhCCCCC-CceECHHHH
Confidence 3344455789999998 6544332 3348999999999655433 233466663
No 130
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=45.90 E-value=16 Score=22.86 Aligned_cols=33 Identities=18% Similarity=0.480 Sum_probs=22.6
Q ss_pred ccccCCCCCCCCccchhhhhhcCCCCC-CcccccccCCC
Q 032682 86 VWILCNDCGANSHVQFHVIAHKCLSCK-SYNTRQTRGDT 123 (136)
Q Consensus 86 ~~i~C~~C~~~~~~~~h~~~~kC~~C~-synt~~~~~~~ 123 (136)
....|..|+++ +.+ ++.+| +|+ -|...+-.++.
T Consensus 24 ~~~RC~~C~kk--vgL--~~f~C-rCg~~FCs~HRy~e~ 57 (74)
T 1wfp_A 24 TATRCLSCNKK--VGV--TGFKC-RCGSTFCGTHRYPES 57 (74)
T ss_dssp CCCBCSSSCCB--CTT--TCEEC-TTSCEECTTTCSTTT
T ss_pred cCccchhhcCc--ccc--cceEe-ccCCEeccccCCCcC
Confidence 45789999988 333 56799 688 56666655443
No 131
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=45.83 E-value=7.5 Score=22.93 Aligned_cols=39 Identities=15% Similarity=0.304 Sum_probs=26.6
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSL 58 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~ 58 (136)
...|+.|.+.+..... ++..=|..||..| ++|-.|++.+
T Consensus 5 ~~~C~~C~~~I~~~~~--~~~a~~~~~H~~C---------F~C~~C~~~L 43 (72)
T 1x61_A 5 SSGCGGCGEDVVGDGA--GVVALDRVFHVGC---------FVCSTCRAQL 43 (72)
T ss_dssp CCCCSSSCSCCCSSSC--CEECSSSEECTTT---------CBCSSSCCBC
T ss_pred CCCCccCCCccCCCce--EEEECCCeEcccC---------CcccccCCcC
Confidence 4679999998643222 2234478888777 5788998877
No 132
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=45.57 E-value=13 Score=16.40 Aligned_cols=13 Identities=31% Similarity=0.945 Sum_probs=9.7
Q ss_pred CCCCCcccccchh
Q 032682 49 YTCPVCSKSLWDM 61 (136)
Q Consensus 49 ~~CP~Cr~~~~~~ 61 (136)
+.|+.|.+.+...
T Consensus 2 ~~C~~C~k~f~~~ 14 (27)
T 1znf_A 2 YKCGLCERSFVEK 14 (27)
T ss_dssp CBCSSSCCBCSSH
T ss_pred ccCCCCCCcCCCH
Confidence 5789998887543
No 133
>3v2d_5 50S ribosomal protein L32; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_4 2hgj_4 2hgu_4 2j03_5 2jl6_5 2jl8_5 2v47_5 2v49_5 2wdi_5 2wdj_5 2wdl_5 2wdn_5 2wh2_5 2wh4_5 2wrj_5 2wrl_5 2wro_5 2wrr_5 2x9s_5 2x9u_5 ...
Probab=45.14 E-value=6.8 Score=23.50 Aligned_cols=29 Identities=28% Similarity=0.607 Sum_probs=21.3
Q ss_pred ccccCCCCCCCCccchhhhhhcCCCCCCcccccc
Q 032682 86 VWILCNDCGANSHVQFHVIAHKCLSCKSYNTRQT 119 (136)
Q Consensus 86 ~~i~C~~C~~~~~~~~h~~~~kC~~C~synt~~~ 119 (136)
..+.|..|++. ...| .-|++||-|+-+++
T Consensus 29 ~l~~c~~cGe~--~~~H---~vc~~CG~Y~gr~V 57 (60)
T 3v2d_5 29 TLVPCPECKAM--KPPH---TVCPECGYYAGRKV 57 (60)
T ss_dssp CCEECTTTCCE--ECTT---SCCTTTCEETTEEC
T ss_pred ceeECCCCCCe--ecce---EEcCCCCcCCCEEe
Confidence 46889999975 2223 46999999988765
No 134
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=44.06 E-value=6 Score=29.18 Aligned_cols=32 Identities=13% Similarity=0.183 Sum_probs=21.4
Q ss_pred CCCcceecCcCccCCccc-eEEecCCcHhhHHHH
Q 032682 8 NDNFYNFGLQFIFDTMKD-ITVLRCGHTIHLECL 40 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~-~~~L~CgH~fh~~Cl 40 (136)
++..|.+|... |.-... -.--.||+.||..|.
T Consensus 160 ~~~~C~~C~~~-F~~~~rrhhCr~CG~v~C~~Cs 192 (220)
T 1dvp_A 160 DGRVCHRCRVE-FTFTNRKHHCRNCGQVFCGQCT 192 (220)
T ss_dssp CCSBCTTTCCB-CCSSSCCEECTTTCCEECSTTS
T ss_pred CCCccCCCCCc-cCCcccccccCCcCCEEChHHh
Confidence 45789999988 543322 222378888888774
No 135
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=43.19 E-value=12 Score=25.09 Aligned_cols=33 Identities=24% Similarity=0.373 Sum_probs=22.5
Q ss_pred cccccCCCCCCCCccchhhhhhcCCCCCCccccc
Q 032682 85 MVWILCNDCGANSHVQFHVIAHKCLSCKSYNTRQ 118 (136)
Q Consensus 85 ~~~i~C~~C~~~~~~~~h~~~~kC~~C~synt~~ 118 (136)
.....|.+|+-.+. .--...-+|+.|+|=|...
T Consensus 65 v~p~~C~~CG~~F~-~~~~kPsrCP~CkSe~Ie~ 97 (105)
T 2gmg_A 65 IKPAQCRKCGFVFK-AEINIPSRCPKCKSEWIEE 97 (105)
T ss_dssp ECCCBBTTTCCBCC-CCSSCCSSCSSSCCCCBCC
T ss_pred EECcChhhCcCeec-ccCCCCCCCcCCCCCccCC
Confidence 34688999998761 1112335899999988754
No 136
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=42.85 E-value=7.9 Score=24.69 Aligned_cols=36 Identities=17% Similarity=0.123 Sum_probs=24.7
Q ss_pred CCCCCcceecCcCccCCccce-EEecCCcHhhHHHHHH
Q 032682 6 NVNDNFYNFGLQFIFDTMKDI-TVLRCGHTIHLECLKE 42 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~~~~~-~~L~CgH~fh~~Cl~~ 42 (136)
..+...|.+|... |.....- .--.||..||..|...
T Consensus 6 ~~~~~~C~~C~~~-F~~~~RrHHCR~CG~vfC~~Cs~~ 42 (88)
T 1wfk_A 6 SGMESRCYGCAVK-FTLFKKEYGCKNCGRAFCNGCLSF 42 (88)
T ss_dssp CCCCSBCTTTCCB-CCSSSCEEECSSSCCEEETTTSCE
T ss_pred CCcCCCCcCcCCc-ccCccccccCCCCCCEEChhHcCC
Confidence 3445689999998 6543322 2347999999999654
No 137
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=42.70 E-value=52 Score=20.33 Aligned_cols=86 Identities=20% Similarity=0.379 Sum_probs=42.8
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccchhhhHHHhhHHHHhcCCCChhhhccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLWDMSKLWSKIDQEIASTPMPAMYQNKMVW 87 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~ 87 (136)
..-.|++|... |.+.... ..|.. .-.....+.|++|.+.+.....+.+-+ ..... ......
T Consensus 6 ~~~~C~~C~~~-f~~~~~l-------~~H~~---~h~~~~~~~C~~C~~~f~~~~~l~~H~----~~~~~----~~~~~~ 66 (124)
T 2dlq_A 6 SGVECPTCHKK-FLSKYYL-------KVHNR---KHTGEKPFECPKCGKCYFRKENLLEHE----ARNCM----NRSEQV 66 (124)
T ss_dssp SSCCCTTTCCC-CSSHHHH-------HHHHH---HHSSCCSCBCTTTCCBCSSHHHHHHHH----HHCCC----CSCCCC
T ss_pred CCCCCCCCCCc-CCCHHHH-------HHHHH---hCCCCCCeECCCCCchhcCHHHHHHHH----hhhhc----CCCCCC
Confidence 44678888877 5432221 11221 010113578999999886544332221 11100 001235
Q ss_pred ccCCCCCCCCc----cchhhhhh------cCCCCC
Q 032682 88 ILCNDCGANSH----VQFHVIAH------KCLSCK 112 (136)
Q Consensus 88 i~C~~C~~~~~----~~~h~~~~------kC~~C~ 112 (136)
..|..|++... ...|.... +|..|+
T Consensus 67 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~ 101 (124)
T 2dlq_A 67 FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCS 101 (124)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSC
T ss_pred eECCCCCCccCCHHHHHHHHHHcCCCCCccCCCcc
Confidence 67999987643 33343222 477777
No 138
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=41.51 E-value=21 Score=23.36 Aligned_cols=43 Identities=12% Similarity=0.131 Sum_probs=21.7
Q ss_pred cceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 11 FYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 11 ~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
.|..|...|. . ......=|..||..|+.+. ...+|..|++.+.
T Consensus 32 ~C~~C~~~L~-~--~~f~~~~g~~yC~~cy~~~---~~~~C~~C~~~I~ 74 (126)
T 2xqn_T 32 CCFDCDSILA-G--EIYVMVNDKPVCKPCYVKN---HAVVCQGCHNAID 74 (126)
T ss_dssp BCTTTCCBCT-T--SEEEEETTEEEEHHHHHHH---SCCBCTTTCSBCC
T ss_pred CcCCCCCCCC-c--CEEEeECCEEechHHhCcC---cCccCcccCCcCC
Confidence 4555555531 1 1222344566666666543 2356667766653
No 139
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=41.41 E-value=5.4 Score=25.51 Aligned_cols=33 Identities=15% Similarity=0.058 Sum_probs=23.2
Q ss_pred CcceecCcCccCCcc-ceEEecCCcHhhHHHHHHH
Q 032682 10 NFYNFGLQFIFDTMK-DITVLRCGHTIHLECLKEM 43 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~-~~~~L~CgH~fh~~Cl~~~ 43 (136)
..|.+|... |.... .-.--.||+.||..|....
T Consensus 21 ~~C~~C~~~-F~~~~RrhhCr~CG~v~C~~Cs~~~ 54 (90)
T 3t7l_A 21 PNCMNCQVK-FTFTKRRHHCRACGKVFCGVCCNRK 54 (90)
T ss_dssp CBCTTTCCB-CCSSSCCEECTTTCCEECGGGSCEE
T ss_pred CcCcCCCCc-ccchhhCccccCCCCEECCcccCCe
Confidence 569999998 55433 2333489999999996543
No 140
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=40.08 E-value=7.2 Score=23.37 Aligned_cols=40 Identities=23% Similarity=0.283 Sum_probs=28.0
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
....|+.|.+.+... . .+..=|..||..| ++|..|++.+.
T Consensus 8 ~~~~C~~C~~~I~~~-~--~v~a~~~~~H~~C---------F~C~~C~~~L~ 47 (76)
T 2cu8_A 8 MASKCPKCDKTVYFA-E--KVSSLGKDWHKFC---------LKCERCSKTLT 47 (76)
T ss_dssp CCCBCTTTCCBCCTT-T--EEEETTEEEETTT---------CBCSSSCCBCC
T ss_pred CCCCCcCCCCEeECC-e--EEEECCeEeeCCC---------CCCCCCCCccC
Confidence 346899999996532 2 2234578888776 67999988874
No 141
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=39.51 E-value=17 Score=16.11 Aligned_cols=14 Identities=21% Similarity=0.800 Sum_probs=10.5
Q ss_pred CCCCCcccccchhh
Q 032682 49 YTCPVCSKSLWDMS 62 (136)
Q Consensus 49 ~~CP~Cr~~~~~~~ 62 (136)
+.|+.|.+.+....
T Consensus 3 ~~C~~C~~~f~~~~ 16 (29)
T 1ard_A 3 FVCEVCTRAFARQE 16 (29)
T ss_dssp CBCTTTCCBCSSHH
T ss_pred eECCCCCcccCCHH
Confidence 67999988886533
No 142
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=39.25 E-value=17 Score=17.54 Aligned_cols=15 Identities=27% Similarity=0.773 Sum_probs=11.5
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|+.|.+.+....
T Consensus 11 ~~~C~~C~k~f~~~~ 25 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSD 25 (37)
T ss_dssp SBCCTTTCCCBSSHH
T ss_pred CccCCCCCcccCcHH
Confidence 478999999886543
No 143
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=39.09 E-value=11 Score=23.10 Aligned_cols=40 Identities=18% Similarity=0.295 Sum_probs=27.8
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
....|+.|.+.+++. ..+. .=|..||..| ++|-.|++.+.
T Consensus 14 ~~~~C~~C~~~I~~~-~~v~--a~~~~wH~~C---------F~C~~C~~~L~ 53 (80)
T 2dj7_A 14 GPSHCAGCKEEIKHG-QSLL--ALDKQWHVSC---------FKCQTCSVILT 53 (80)
T ss_dssp SCSCCTTTCCCCSSS-CCEE--ETTEEECTTT---------CBCSSSCCBCS
T ss_pred CCCCCcCcCCeeCCC-eEEE--ECCccccccc---------CCcCcCCCCcC
Confidence 457899999997533 2222 3477888776 67999987763
No 144
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=38.56 E-value=55 Score=20.20 Aligned_cols=41 Identities=17% Similarity=0.390 Sum_probs=24.0
Q ss_pred cCCCCCCccccc-chhhhHHHhhHHHHhcCCCChhhhcccccccCCCCCCCCcc
Q 032682 47 YRYTCPVCSKSL-WDMSKLWSKIDQEIASTPMPAMYQNKMVWILCNDCGANSHV 99 (136)
Q Consensus 47 ~~~~CP~Cr~~~-~~~~~~~~~l~~~~~~~~~p~~~~~~~~~i~C~~C~~~~~~ 99 (136)
..+.|+.|.+.| .....+..-+..- . .....|..|++....
T Consensus 33 ~~~~C~~C~k~F~~~~~~L~~H~~~h-~-----------~k~~~C~~Cgk~F~~ 74 (96)
T 2ctd_A 33 GSVSCPTCQAVGRKTIEGLKKHMENC-K-----------QEMFTCHHCGKQLRS 74 (96)
T ss_dssp SCEECTTTCSCEESSHHHHHHHHHHH-C-----------CCCCCCSSSCCCCSS
T ss_pred CCcCCCCCCCCcccCHHHHHHHHHHH-C-----------CCCeECCCCCCeeCC
Confidence 457899999998 6544333222111 1 124569999877543
No 145
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=38.09 E-value=42 Score=17.73 Aligned_cols=14 Identities=21% Similarity=0.470 Sum_probs=8.7
Q ss_pred CCCCCCcccccchh
Q 032682 48 RYTCPVCSKSLWDM 61 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~ 61 (136)
.+.|++|.+.+...
T Consensus 4 ~~~C~~C~~~f~~~ 17 (57)
T 3uk3_C 4 SRECSYCGKFFRSN 17 (57)
T ss_dssp -CBCTTTCCBCSCH
T ss_pred CccCCCCcchhCCh
Confidence 36677777776543
No 146
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.49 E-value=13 Score=23.01 Aligned_cols=38 Identities=18% Similarity=0.308 Sum_probs=27.3
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
...|+.|.+.+. ...+..=|..||..| ++|-.|++.+.
T Consensus 25 ~~~C~~C~~~I~----~~~v~a~~~~~H~~C---------F~C~~C~~~L~ 62 (90)
T 2dar_A 25 TPMCAHCNQVIR----GPFLVALGKSWHPEE---------FNCAHCKNTMA 62 (90)
T ss_dssp CCBBSSSCCBCC----SCEEEETTEEECTTT---------CBCSSSCCBCS
T ss_pred CCCCccCCCEec----ceEEEECCccccccC---------CccCCCCCCCC
Confidence 357999999863 223345588888877 67999988874
No 147
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.23 E-value=12 Score=22.37 Aligned_cols=41 Identities=22% Similarity=0.169 Sum_probs=27.1
Q ss_pred CcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
..|+.|.+.+.+......+..=|..||..| ++|-.|++.+.
T Consensus 6 ~~C~~C~~~I~~~g~~~~~~a~~~~wH~~C---------F~C~~C~~~L~ 46 (76)
T 1x68_A 6 SGCVACSKPISGLTGAKFICFQDSQWHSEC---------FNCGKCSVSLV 46 (76)
T ss_dssp CCCTTTCCCCCTTTTCCEEEETTEEEEGGG---------CBCTTTCCBCS
T ss_pred CCCccCCCcccCCCCceeEEECCcccCccc---------CChhhCCCcCC
Confidence 579999998653001122334578888877 67999987763
No 148
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=37.04 E-value=13 Score=21.06 Aligned_cols=44 Identities=16% Similarity=0.206 Sum_probs=24.5
Q ss_pred cceecCcCccCCccceEE-e-cCCcHhhHHHHHHH---HhhcCCCCCCcc
Q 032682 11 FYNFGLQFIFDTMKDITV-L-RCGHTIHLECLKEM---EKHYRYTCPVCS 55 (136)
Q Consensus 11 ~CpIC~e~lf~~~~~~~~-L-~CgH~fh~~Cl~~~---~~~~~~~CP~Cr 55 (136)
.|.+|..+ ++.....+. - .|.-=||..|+.-- .....+.||.|+
T Consensus 4 ~cc~C~~p-~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRP-CKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCC-CCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCc-cCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 46788877 332221221 1 46677888887431 112568898884
No 149
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=36.74 E-value=18 Score=16.08 Aligned_cols=14 Identities=36% Similarity=0.619 Sum_probs=10.5
Q ss_pred CCCCCcccccchhh
Q 032682 49 YTCPVCSKSLWDMS 62 (136)
Q Consensus 49 ~~CP~Cr~~~~~~~ 62 (136)
+.|+.|.+.+....
T Consensus 3 ~~C~~C~k~f~~~~ 16 (30)
T 1klr_A 3 YQCQYCEFRSADSS 16 (30)
T ss_dssp CCCSSSSCCCSCSH
T ss_pred ccCCCCCCccCCHH
Confidence 67999988886433
No 150
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=36.56 E-value=9.6 Score=23.90 Aligned_cols=31 Identities=19% Similarity=0.177 Sum_probs=21.6
Q ss_pred CcceecCcCccCCccce-EEecCCcHhhHHHHH
Q 032682 10 NFYNFGLQFIFDTMKDI-TVLRCGHTIHLECLK 41 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~-~~L~CgH~fh~~Cl~ 41 (136)
..|.+|... |.....- .--.||+.||..|..
T Consensus 22 ~~C~~C~~~-Fs~~~RrHHCR~CG~v~C~~Cs~ 53 (84)
T 1z2q_A 22 PACNGCGCV-FTTTVRRHHCRNCGYVLCGDCSR 53 (84)
T ss_dssp CBCTTTCCB-CCTTSCCEECTTTCCEECTGGGC
T ss_pred CCCcCcCCc-cccchhcccccCCCcEEChHHhC
Confidence 579999998 6543322 223789999998853
No 151
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=36.56 E-value=19 Score=15.81 Aligned_cols=13 Identities=31% Similarity=0.800 Sum_probs=9.9
Q ss_pred CCCCCcccccchh
Q 032682 49 YTCPVCSKSLWDM 61 (136)
Q Consensus 49 ~~CP~Cr~~~~~~ 61 (136)
+.|+.|.+.+...
T Consensus 3 ~~C~~C~~~f~~~ 15 (29)
T 2m0e_A 3 HKCPHCDKKFNQV 15 (29)
T ss_dssp CCCSSCCCCCCTT
T ss_pred CcCCCCCcccCCH
Confidence 6799998887543
No 152
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.24 E-value=15 Score=21.92 Aligned_cols=29 Identities=24% Similarity=0.551 Sum_probs=21.0
Q ss_pred cccCCCCCCCCccchhhhhhcCCCCCCccccc
Q 032682 87 WILCNDCGANSHVQFHVIAHKCLSCKSYNTRQ 118 (136)
Q Consensus 87 ~i~C~~C~~~~~~~~h~~~~kC~~C~synt~~ 118 (136)
.+.|+.|+....+ ..+.||..|..|+.-+
T Consensus 11 ~~~Cd~C~~~pi~---G~RykC~~C~d~DLC~ 39 (63)
T 2e5r_A 11 PVECSYCHSESMM---GFRYRCQQCHNYQLCQ 39 (63)
T ss_dssp CSCCSSSCCCSSC---SCEEEESSCSSCEECH
T ss_pred CCCCcCCCCccee---cceEEecCCCCchhHH
Confidence 3889999976433 2566999998887654
No 153
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=35.95 E-value=9.4 Score=25.90 Aligned_cols=30 Identities=17% Similarity=0.160 Sum_probs=20.8
Q ss_pred CcceecCcCccCCccce-EEecCCcHhhHHHH
Q 032682 10 NFYNFGLQFIFDTMKDI-TVLRCGHTIHLECL 40 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~-~~L~CgH~fh~~Cl 40 (136)
..|.+|... |.....- .--.||+.||..|.
T Consensus 70 ~~C~~C~~~-Fs~~~RrHHCR~CG~vfC~~Cs 100 (125)
T 1joc_A 70 QNCMACGKG-FSVTVRRHHCRQCGNIFCAECS 100 (125)
T ss_dssp CBCTTTCCB-CCSSSCCEECTTTCCEECGGGS
T ss_pred CCCcCcCCc-cccccccccCCCCCeEEChHHh
Confidence 579999998 6543322 22378999998884
No 154
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=35.84 E-value=15 Score=16.33 Aligned_cols=15 Identities=27% Similarity=0.831 Sum_probs=10.8
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|+.|.+.+....
T Consensus 3 ~~~C~~C~k~f~~~~ 17 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFS 17 (27)
T ss_dssp CEECSSSSCEESSHH
T ss_pred CccCCCcChhhCCHH
Confidence 367999998886533
No 155
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=35.81 E-value=14 Score=16.42 Aligned_cols=14 Identities=36% Similarity=0.759 Sum_probs=10.4
Q ss_pred CCCCCCcccccchh
Q 032682 48 RYTCPVCSKSLWDM 61 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~ 61 (136)
.+.|+.|.+.+...
T Consensus 3 ~~~C~~C~k~f~~~ 16 (28)
T 2kvf_A 3 PYSCSVCGKRFSLK 16 (28)
T ss_dssp SEECSSSCCEESCH
T ss_pred CccCCCCCcccCCH
Confidence 36799998888643
No 156
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=35.72 E-value=30 Score=19.89 Aligned_cols=13 Identities=31% Similarity=0.836 Sum_probs=8.3
Q ss_pred CCCCCcccccchh
Q 032682 49 YTCPVCSKSLWDM 61 (136)
Q Consensus 49 ~~CP~Cr~~~~~~ 61 (136)
+.|++|.+.|...
T Consensus 5 y~C~~C~k~F~~~ 17 (60)
T 4gzn_C 5 FFCNFCGKTYRDA 17 (60)
T ss_dssp EECTTTCCEESSH
T ss_pred ccCCCCCCEeCCH
Confidence 5677777776543
No 157
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=35.51 E-value=9.7 Score=22.76 Aligned_cols=37 Identities=19% Similarity=0.322 Sum_probs=25.3
Q ss_pred cceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 11 FYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 11 ~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
.|+.|.+.+... ..+ ..=|..||..| ++|..|++.+.
T Consensus 2 ~C~~C~~~I~~~-~~v--~a~~~~~H~~C---------F~C~~C~~~L~ 38 (76)
T 1iml_A 2 KCPKCDKEVYFA-ERV--TSLGKDWHRPC---------LKCEKCGKTLT 38 (76)
T ss_dssp BCTTTSSBCCGG-GEE--EETTEEEETTT---------CBCTTTCCBCC
T ss_pred cCCCCCCEEECc-eEE--EECCccccCCC---------CCccccCccCC
Confidence 588888886422 222 33388888877 67999988774
No 158
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=35.03 E-value=9.7 Score=23.03 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=26.0
Q ss_pred CcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
..|+.|.+.+.... .++..=|..||..| ++|-.|++.+.
T Consensus 16 ~~C~~C~~~I~~~~--~~~~a~~~~~H~~C---------F~C~~C~~~L~ 54 (82)
T 1x63_A 16 PKCKGCFKAIVAGD--QNVEYKGTVWHKDC---------FTCSNCKQVIG 54 (82)
T ss_dssp CBCSSSCCBCCSSS--CEEECSSCEEETTT---------CCCSSSCCCCT
T ss_pred CcCccCCcccccCc--eEEEECcccccccc---------CchhhCCCccC
Confidence 57999998864321 22234477888776 57889987764
No 159
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=34.75 E-value=13 Score=24.65 Aligned_cols=38 Identities=21% Similarity=0.358 Sum_probs=25.8
Q ss_pred CcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSL 58 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~ 58 (136)
..|+.|.+.+......+ ..=|..||..| ++|-.|++.+
T Consensus 9 ~~C~~C~~~I~~~e~~~--~a~~~~~H~~C---------F~C~~C~~~L 46 (123)
T 2l3k_A 9 GLCASCDKRIRAYEMTM--RVKDKVYHLEC---------FKCAACQKHF 46 (123)
T ss_dssp CCCSSSSCCCCTTCCCC--CCSSCCCCTTT---------CBCTTTCCBC
T ss_pred CcccCCCCeecCCceEE--EECCccccccc---------CccccCCCCC
Confidence 47999999864322211 23378888877 5788898776
No 160
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=34.75 E-value=1.9 Score=27.08 Aligned_cols=14 Identities=29% Similarity=0.693 Sum_probs=12.5
Q ss_pred cCCcHhhHHHHHHH
Q 032682 30 RCGHTIHLECLKEM 43 (136)
Q Consensus 30 ~CgH~fh~~Cl~~~ 43 (136)
.||+.||..|.+.|
T Consensus 55 ~C~~~FC~~C~~~w 68 (80)
T 2jmo_A 55 GCGFAFCRECKEAY 68 (80)
T ss_dssp CCSCCEETTTTEEC
T ss_pred CCCCeeccccCccc
Confidence 58999999998887
No 161
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=34.64 E-value=35 Score=18.06 Aligned_cols=12 Identities=25% Similarity=0.625 Sum_probs=7.2
Q ss_pred CCCCCcccccch
Q 032682 49 YTCPVCSKSLWD 60 (136)
Q Consensus 49 ~~CP~Cr~~~~~ 60 (136)
+.|++|.+.+..
T Consensus 2 ~~C~~C~~~f~~ 13 (57)
T 1bbo_A 2 YICEECGIRXKK 13 (57)
T ss_dssp CBCTTTCCBCSS
T ss_pred CcCCCCcCcCCC
Confidence 456666666644
No 162
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=34.54 E-value=30 Score=21.02 Aligned_cols=34 Identities=12% Similarity=0.304 Sum_probs=23.2
Q ss_pred cccCCCCCCCCccchhhhhhcCCCCC-CcccccccCCCCC
Q 032682 87 WILCNDCGANSHVQFHVIAHKCLSCK-SYNTRQTRGDTAT 125 (136)
Q Consensus 87 ~i~C~~C~~~~~~~~h~~~~kC~~C~-synt~~~~~~~~~ 125 (136)
...|..|+++-.. ++.+| +|+ -|...+-.++.-.
T Consensus 15 ~~rC~~C~kkvgl----~~f~C-rCg~~FC~~HRy~e~H~ 49 (64)
T 1wfh_A 15 PNRCTVCRKRVGL----TGFMC-RCGTTFCGSHRYPEVHG 49 (64)
T ss_dssp CCCCTTTCCCCCT----TCEEC-SSSCEECTTTCSTTTTT
T ss_pred CCcChhhCCccCc----cCEEe-ecCCEeccccCCcccCC
Confidence 5679999988332 46789 698 6777776554433
No 163
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.52 E-value=22 Score=16.88 Aligned_cols=15 Identities=20% Similarity=0.488 Sum_probs=11.4
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 9 ~~~C~~C~k~f~~~~ 23 (36)
T 2elr_A 9 THLCDMCGKKFKSKG 23 (36)
T ss_dssp SCBCTTTCCBCSSHH
T ss_pred CeecCcCCCCcCchH
Confidence 477999999886543
No 164
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=34.42 E-value=15 Score=21.30 Aligned_cols=41 Identities=15% Similarity=0.212 Sum_probs=27.2
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
....|+.|.+.+... ..++..=|..+|..| ++|-.|++.+.
T Consensus 10 ~~~~C~~C~~~i~~~--e~~~~~~~~~~H~~C---------F~C~~C~~~L~ 50 (72)
T 3f6q_B 10 ASATCERCKGGFAPA--EKIVNSNGELYHEQC---------FVCAQCFQQFP 50 (72)
T ss_dssp TTCBCTTTCCBCCTT--CEEEEETTEEEETTT---------SSCTTTCCCCG
T ss_pred CCccchhcCccccCC--ceEEEeCcCeeCcCC---------CcccCCCCCCC
Confidence 346799999986432 222224577788777 47889988874
No 165
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=34.31 E-value=12 Score=22.87 Aligned_cols=40 Identities=20% Similarity=0.630 Sum_probs=27.5
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
....|+.|.+.+++... + ..=|..||..| ++|-.|++.+.
T Consensus 14 ~~~~C~~C~~~I~~~e~-v--~a~~~~wH~~C---------F~C~~C~~~L~ 53 (82)
T 2co8_A 14 AGDLCALCGEHLYVLER-L--CVNGHFFHRSC---------FRCHTCEATLW 53 (82)
T ss_dssp SSCBCSSSCCBCCTTTB-C--CBTTBCCBTTT---------CBCSSSCCBCC
T ss_pred CCCCCcccCCCcccceE-E--EECCCeeCCCc---------CEEcCCCCCcC
Confidence 44679999998654322 2 23477888777 67889987764
No 166
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=34.11 E-value=18 Score=22.21 Aligned_cols=28 Identities=18% Similarity=0.517 Sum_probs=18.1
Q ss_pred cccccCCCCCCCCccchhhhhhcCCCCCC
Q 032682 85 MVWILCNDCGANSHVQFHVIAHKCLSCKS 113 (136)
Q Consensus 85 ~~~i~C~~C~~~~~~~~h~~~~kC~~C~s 113 (136)
.....|.+|+....... .-..+|+.||.
T Consensus 26 ~v~Y~C~~CG~~~e~~~-~d~irCp~CG~ 53 (70)
T 1twf_L 26 TLKYICAECSSKLSLSR-TDAVRCKDCGH 53 (70)
T ss_dssp CCCEECSSSCCEECCCT-TSTTCCSSSCC
T ss_pred eEEEECCCCCCcceeCC-CCCccCCCCCc
Confidence 45678999987733321 12347999986
No 167
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.96 E-value=12 Score=22.06 Aligned_cols=42 Identities=19% Similarity=0.123 Sum_probs=27.2
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
...|+-|.+.+.......++..-|..||..| ++|-.|++.+.
T Consensus 5 ~~~C~~C~~~I~~~~~~~~~~a~~~~wH~~C---------F~C~~C~~~L~ 46 (72)
T 1x4l_A 5 SSGCAGCTNPISGLGGTKYISFEERQWHNDC---------FNCKKCSLSLV 46 (72)
T ss_dssp SCSBTTTTBCCCCSSSCSCEECSSCEECTTT---------CBCSSSCCBCT
T ss_pred CCCCcCCCccccCCCCcceEEECCcccCccc---------CEeccCCCcCC
Confidence 3679999998753001122234578888777 67999988763
No 168
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=33.91 E-value=21 Score=16.00 Aligned_cols=13 Identities=23% Similarity=0.841 Sum_probs=9.8
Q ss_pred CCCCCcccccchh
Q 032682 49 YTCPVCSKSLWDM 61 (136)
Q Consensus 49 ~~CP~Cr~~~~~~ 61 (136)
+.|+.|.+.+...
T Consensus 3 ~~C~~C~k~f~~~ 15 (30)
T 1paa_A 3 YACGLCNRAFTRR 15 (30)
T ss_dssp SBCTTTCCBCSSS
T ss_pred cCCcccCcccCCh
Confidence 6799998887543
No 169
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=33.87 E-value=7.2 Score=25.29 Aligned_cols=41 Identities=20% Similarity=0.457 Sum_probs=25.5
Q ss_pred CcceecCcCccCCccceEEe--c--CC-cHhhHHHHHHHHhh---cCCCCCCcccc
Q 032682 10 NFYNFGLQFIFDTMKDITVL--R--CG-HTIHLECLKEMEKH---YRYTCPVCSKS 57 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L--~--Cg-H~fh~~Cl~~~~~~---~~~~CP~Cr~~ 57 (136)
..| ||.+.- . . .++. . |. .-||..|+. +.. +.+.||.|+..
T Consensus 37 ~yC-iC~~~~-~--g-~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~ 85 (91)
T 1weu_A 37 TYC-LCHQVS-Y--G-EMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 85 (91)
T ss_dssp BCS-TTCCBC-C--S-CCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCC
T ss_pred cEE-ECCCCC-C--C-CEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCc
Confidence 457 999872 2 1 2211 3 54 579999986 222 45779999754
No 170
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=33.43 E-value=6.1 Score=27.87 Aligned_cols=48 Identities=21% Similarity=0.331 Sum_probs=29.7
Q ss_pred CCCcceecCcCccCCccceEE-ecCCcHhhHHHHHHHHh----hcCCCCCCcccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITV-LRCGHTIHLECLKEMEK----HYRYTCPVCSKS 57 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~-L~CgH~fh~~Cl~~~~~----~~~~~CP~Cr~~ 57 (136)
....| ||... .+.....+. -.|.--||..|+.--.. ...+.||.|+..
T Consensus 7 ~~~~C-~C~~~-~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 7 TKLYC-ICKTP-EDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp CCEET-TTTEE-CCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCcEe-eCCCC-CCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 44668 99887 332222211 16788999999853111 246889999753
No 171
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=33.42 E-value=22 Score=21.31 Aligned_cols=21 Identities=24% Similarity=0.673 Sum_probs=10.4
Q ss_pred ccCCCCCCCCccchhhhhhcCCCCCCc
Q 032682 88 ILCNDCGANSHVQFHVIAHKCLSCKSY 114 (136)
Q Consensus 88 i~C~~C~~~~~~~~h~~~~kC~~C~sy 114 (136)
..|..|+.-. +...|+.||+-
T Consensus 7 r~C~~CgvYT------Lk~~CP~CG~~ 27 (60)
T 2apo_B 7 KKCPKCGLYT------LKEICPKCGEK 27 (60)
T ss_dssp EECTTTCCEE------SSSBCSSSCSB
T ss_pred eeCCCCCCEe------ccccCcCCCCc
Confidence 4466665321 23456666643
No 172
>2zjr_Z 50S ribosomal protein L32; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: g.41.8.5 PDB: 1j5a_M* 1jzy_M* 1jzz_M* 1k01_M* 1nkw_Z 1ond_Z* 1sm1_Z* 1yl3_5 2b66_5 2b9n_5 2b9p_5 2zjp_Y* 2zjq_Z 1jzx_M 3cf5_Y* 3dll_Y* 3pio_Z* 3pip_Z* 1nwy_Z* 1nwx_Z* ...
Probab=33.16 E-value=18 Score=21.49 Aligned_cols=29 Identities=28% Similarity=0.590 Sum_probs=21.7
Q ss_pred ccccCCCCCCCCccchhhhhhcCCCCCCcccccc
Q 032682 86 VWILCNDCGANSHVQFHVIAHKCLSCKSYNTRQT 119 (136)
Q Consensus 86 ~~i~C~~C~~~~~~~~h~~~~kC~~C~synt~~~ 119 (136)
..+.|..|++.. . -..-|++||-|+-+++
T Consensus 29 ~l~~c~~cG~~~--~---pH~vc~~CG~Y~gr~v 57 (60)
T 2zjr_Z 29 NLTECPQCHGKK--L---SHHICPNCGYYDGRQV 57 (60)
T ss_dssp CCEECTTTCCEE--C---TTBCCTTTCBSSSBCS
T ss_pred CceECCCCCCEe--C---CceEcCCCCcCCCEEe
Confidence 467899999762 1 3457999999988765
No 173
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.11 E-value=13 Score=23.24 Aligned_cols=30 Identities=17% Similarity=0.287 Sum_probs=20.7
Q ss_pred CcceecCcCccCCccce-EEecCCcHhhHHHH
Q 032682 10 NFYNFGLQFIFDTMKDI-TVLRCGHTIHLECL 40 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~-~~L~CgH~fh~~Cl 40 (136)
..|.+|... |.....- .--.||..||..|.
T Consensus 15 ~~C~~C~~~-F~~~~RrHHCR~CG~vfC~~Cs 45 (84)
T 1x4u_A 15 GNCTGCSAT-FSVLKKRRSCSNCGNSFCSRCC 45 (84)
T ss_dssp SSCSSSCCC-CCSSSCCEECSSSCCEECTTTS
T ss_pred CcCcCcCCc-cccchhhhhhcCCCcEEChhhc
Confidence 579999998 6443322 22378999988883
No 174
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=32.73 E-value=5 Score=30.40 Aligned_cols=43 Identities=21% Similarity=0.437 Sum_probs=24.2
Q ss_pred cceecCcCccCCccceEEe--cCCcHhhHHHHHHHHhh---c-CCCCCCccc
Q 032682 11 FYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEMEKH---Y-RYTCPVCSK 56 (136)
Q Consensus 11 ~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~~~~---~-~~~CP~Cr~ 56 (136)
.|.+|... -+ ....++ .|...||..|+..=+.. + .-.||.|+.
T Consensus 176 ~C~vC~~~-~~--~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 176 ACHLCGGR-QD--PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp SCSSSCCC-CC----CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCcCCCCC-CC--CCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 58888764 11 112223 78899999999853332 2 346999964
No 175
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=32.41 E-value=11 Score=23.44 Aligned_cols=31 Identities=16% Similarity=0.255 Sum_probs=21.0
Q ss_pred CcceecCcCccCCccce-EEecCCcHhhHHHHH
Q 032682 10 NFYNFGLQFIFDTMKDI-TVLRCGHTIHLECLK 41 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~-~~L~CgH~fh~~Cl~ 41 (136)
..|.+|... |.-...- .--.||..||..|..
T Consensus 20 ~~C~~C~~~-Fs~~~RrHHCR~CG~v~C~~Cs~ 51 (82)
T 2yw8_A 20 THCRQCEKE-FSISRRKHHCRNCGHIFCNTCSS 51 (82)
T ss_dssp CBCTTTCCB-CBTTBCCEECTTTCCEECSGGGC
T ss_pred CcccCcCCc-ccCccccccCCCCCCEEChHHhC
Confidence 579999998 5533322 223789999888853
No 176
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=32.35 E-value=19 Score=15.83 Aligned_cols=13 Identities=23% Similarity=0.544 Sum_probs=9.7
Q ss_pred CCCCCcccccchh
Q 032682 49 YTCPVCSKSLWDM 61 (136)
Q Consensus 49 ~~CP~Cr~~~~~~ 61 (136)
+.|+.|.+.+...
T Consensus 3 ~~C~~C~k~f~~~ 15 (29)
T 2m0f_A 3 LKCRECGKQFTTS 15 (29)
T ss_dssp EECTTTSCEESCH
T ss_pred ccCCCCCCccCCh
Confidence 5789998887543
No 177
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=32.33 E-value=7 Score=27.69 Aligned_cols=49 Identities=16% Similarity=0.247 Sum_probs=31.3
Q ss_pred CCCcceecCcCc-cCCccceEEecCCcHhhHHHHHHHHhh-cCCCCCCcccc
Q 032682 8 NDNFYNFGLQFI-FDTMKDITVLRCGHTIHLECLKEMEKH-YRYTCPVCSKS 57 (136)
Q Consensus 8 ~~~~CpIC~e~l-f~~~~~~~~L~CgH~fh~~Cl~~~~~~-~~~~CP~Cr~~ 57 (136)
++..|.+|...| |.......-..|+|.+|.+|-. |... ..-.|-+|++.
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~-~~~~~~~W~C~vC~k~ 117 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSH-AHPEEQGWLCDPCHLA 117 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEE-CCSSSSSCEEHHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhccccc-ccCCCCcEeeHHHHHH
Confidence 568899999983 2222344445899999999962 2211 22348888755
No 178
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.19 E-value=40 Score=20.61 Aligned_cols=35 Identities=11% Similarity=0.195 Sum_probs=21.8
Q ss_pred cccccCCCCCCCCccchhhhhhcCCCCC-CcccccccC
Q 032682 85 MVWILCNDCGANSHVQFHVIAHKCLSCK-SYNTRQTRG 121 (136)
Q Consensus 85 ~~~i~C~~C~~~~~~~~h~~~~kC~~C~-synt~~~~~ 121 (136)
+....|..|+++....- ..+.+| +|+ -|...+.-+
T Consensus 13 ~~~~rC~~C~kk~gL~~-~egf~C-rCg~~FC~~HRy~ 48 (67)
T 1x4w_A 13 KSRRRCFQCQTKLELVQ-QELGSC-RCGYVFCMLHRLP 48 (67)
T ss_dssp SCTTBCSSSCCBCCHHH-HHHHCC-SSSCCCCTTTCST
T ss_pred ccCCcchhhCCeecccc-cCceEe-cCCCEehhccCCc
Confidence 34678999998843210 013689 888 666666544
No 179
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=32.16 E-value=2.2 Score=26.05 Aligned_cols=44 Identities=23% Similarity=0.405 Sum_probs=26.6
Q ss_pred CCcceecCcCccCCccceEEe--cCCcHhhHHHHHHHHhh--cCCCCCCccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEMEKH--YRYTCPVCSK 56 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~~~~--~~~~CP~Cr~ 56 (136)
...| ||... .+ ...++- .|.-=||..|+.--... ..+.||.|+.
T Consensus 19 ~~~C-iC~~~-~~--~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 19 LVTC-FCMKP-FA--GRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp CCCS-TTCCC-CT--TCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred ceEe-ECCCc-CC--CCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 3568 99877 33 222222 67888888887532211 3577888864
No 180
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.10 E-value=16 Score=21.38 Aligned_cols=40 Identities=18% Similarity=0.279 Sum_probs=27.4
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
...|+.|.+.+... ..++..=|..||..| ++|-.|++.+.
T Consensus 5 ~~~C~~C~~~I~~~--~~~~~a~~~~~H~~C---------F~C~~C~~~L~ 44 (72)
T 1wyh_A 5 SSGCSACGETVMPG--SRKLEYGGQTWHEHC---------FLCSGCEQPLG 44 (72)
T ss_dssp CCBCSSSCCBCCSS--SCEECSTTCCEETTT---------CBCTTTCCBTT
T ss_pred CCCCccCCCccccC--ccEEEECccccCccc---------CeECCCCCcCC
Confidence 35799999986432 223335578888777 57889987763
No 181
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=32.06 E-value=26 Score=21.24 Aligned_cols=33 Identities=18% Similarity=0.454 Sum_probs=22.8
Q ss_pred cccCCCCCCCCccchhhhhhcCCCCC-CcccccccCCCC
Q 032682 87 WILCNDCGANSHVQFHVIAHKCLSCK-SYNTRQTRGDTA 124 (136)
Q Consensus 87 ~i~C~~C~~~~~~~~h~~~~kC~~C~-synt~~~~~~~~ 124 (136)
...|..|+++-.. ++.+| +|+ -|...+-.++.-
T Consensus 15 ~~rC~~C~kkvgl----~~f~C-rCg~~FC~~HR~~e~H 48 (64)
T 1wg2_A 15 NNRCFSCNKKVGV----MGFKC-KCGSTFCGSHRYPEKH 48 (64)
T ss_dssp SCSCTTTCCCCTT----SCEEC-TTSCEECSSSCSSTTT
T ss_pred CCcChhhCCcccc----cCeEe-ecCCEecccCCCcccc
Confidence 5679999988322 46689 798 677777655443
No 182
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=32.04 E-value=14 Score=21.13 Aligned_cols=25 Identities=24% Similarity=0.527 Sum_probs=12.8
Q ss_pred ccCCCCCCCCccchhhhhhcCCCCC
Q 032682 88 ILCNDCGANSHVQFHVIAHKCLSCK 112 (136)
Q Consensus 88 i~C~~C~~~~~~~~h~~~~kC~~C~ 112 (136)
-.|..|+...-...|.-.+.|+.||
T Consensus 20 k~CP~CG~~~fm~~~~~R~~C~kCG 44 (50)
T 3j20_Y 20 KFCPRCGPGVFMADHGDRWACGKCG 44 (50)
T ss_dssp EECSSSCSSCEEEECSSEEECSSSC
T ss_pred ccCCCCCCceEEecCCCeEECCCCC
Confidence 4455565533333344455666665
No 183
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=31.80 E-value=27 Score=16.56 Aligned_cols=15 Identities=27% Similarity=0.848 Sum_probs=11.2
Q ss_pred CCCCCcccccchhhh
Q 032682 49 YTCPVCSKSLWDMSK 63 (136)
Q Consensus 49 ~~CP~Cr~~~~~~~~ 63 (136)
+.|+.|.+.+.....
T Consensus 3 ~~C~~C~k~F~~~~~ 17 (33)
T 1rim_A 3 FACPECPKRFMRSDH 17 (33)
T ss_dssp CCCSSSCCCCSSHHH
T ss_pred ccCCCCCchhCCHHH
Confidence 679999998865443
No 184
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.63 E-value=16 Score=21.31 Aligned_cols=36 Identities=25% Similarity=0.324 Sum_probs=25.8
Q ss_pred CcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSL 58 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~ 58 (136)
..|+.|.+.+.+ . .+..=|..||..| ++|-.|++.+
T Consensus 6 ~~C~~C~~~I~~--~--~~~a~~~~~H~~C---------F~C~~C~~~L 41 (70)
T 2d8z_A 6 SGCVQCKKPITT--G--GVTYREQPWHKEC---------FVCTACRKQL 41 (70)
T ss_dssp CBCSSSCCBCCS--S--EEESSSSEEETTT---------SBCSSSCCBC
T ss_pred CCCcccCCeecc--c--eEEECccccCCCC---------CccCCCCCcC
Confidence 579999998642 2 2334578888776 6788998776
No 185
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=31.61 E-value=14 Score=24.61 Aligned_cols=38 Identities=18% Similarity=0.191 Sum_probs=27.4
Q ss_pred CcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
..|+-|.+.+.+. .++..-|..||..| ++|-.|++.+.
T Consensus 62 ~~C~~C~~~I~~~---~~v~a~~~~wH~~C---------F~C~~C~~~L~ 99 (123)
T 2l4z_A 62 KRCAGCGGKIADR---FLLYAMDSYWHSRC---------LKCSSCQAQLG 99 (123)
T ss_dssp SBBSSSSSBCCSS---SEEEETTEEEETTT---------SBCTTTCCBGG
T ss_pred CcCcCCCCCcCCc---EEEEeCCcEEcccc---------cCcCcCCCccc
Confidence 5799999997532 22334588888877 67999988874
No 186
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.37 E-value=13 Score=22.39 Aligned_cols=37 Identities=24% Similarity=0.280 Sum_probs=27.0
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSL 58 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~ 58 (136)
...|+.|.+.+.. . .+..-+..||..| ++|-.|++.+
T Consensus 15 ~~~C~~C~~~I~~--~--~~~a~~~~~H~~C---------F~C~~C~~~L 51 (79)
T 1x62_A 15 LPMCDKCGTGIVG--V--FVKLRDRHRHPEC---------YVCTDCGTNL 51 (79)
T ss_dssp CCCCSSSCCCCCS--S--CEECSSCEECTTT---------TSCSSSCCCH
T ss_pred CCccccCCCCccC--c--EEEECcceeCcCc---------CeeCCCCCCC
Confidence 3679999999753 2 2334578888877 5788998876
No 187
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=31.25 E-value=16 Score=16.23 Aligned_cols=13 Identities=31% Similarity=0.951 Sum_probs=9.7
Q ss_pred CCCCCcccccchh
Q 032682 49 YTCPVCSKSLWDM 61 (136)
Q Consensus 49 ~~CP~Cr~~~~~~ 61 (136)
+.|+.|.+.+...
T Consensus 3 ~~C~~C~k~f~~~ 15 (29)
T 1rik_A 3 FACPECPKRFMRS 15 (29)
T ss_dssp EECSSSSCEESCS
T ss_pred ccCCCCCchhCCH
Confidence 5799998887543
No 188
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=31.14 E-value=19 Score=16.95 Aligned_cols=15 Identities=27% Similarity=0.662 Sum_probs=11.3
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|+.|.+.|....
T Consensus 7 ~~~C~~C~k~f~~~~ 21 (35)
T 2elx_A 7 GYVCALCLKKFVSSI 21 (35)
T ss_dssp SEECSSSCCEESSHH
T ss_pred CeECCCCcchhCCHH
Confidence 467999999886543
No 189
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=37.01 E-value=10 Score=16.71 Aligned_cols=12 Identities=33% Similarity=0.888 Sum_probs=8.7
Q ss_pred CCCCCcccccch
Q 032682 49 YTCPVCSKSLWD 60 (136)
Q Consensus 49 ~~CP~Cr~~~~~ 60 (136)
+.|+.|.+.+..
T Consensus 3 ~~C~~C~k~f~~ 14 (26)
T 2lvu_A 3 YVCERCGKRFVQ 14 (26)
Confidence 568888877753
No 190
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=30.47 E-value=36 Score=21.21 Aligned_cols=31 Identities=19% Similarity=0.371 Sum_probs=21.4
Q ss_pred cccCCCCCCCCccchhhhhhcCCCCC-CcccccccCC
Q 032682 87 WILCNDCGANSHVQFHVIAHKCLSCK-SYNTRQTRGD 122 (136)
Q Consensus 87 ~i~C~~C~~~~~~~~h~~~~kC~~C~-synt~~~~~~ 122 (136)
...|..|+++ +.+ ++.+|. |+ -|...+..++
T Consensus 25 ~nRC~~CrKk--vgL--~gf~Cr-Cg~~FCs~HRy~e 56 (74)
T 1wfl_A 25 KNRCFMCRKK--VGL--TGFDCR-CGNLFCGLHRYSD 56 (74)
T ss_dssp TTBCSSSCCB--CGG--GCEECT-TSCEECSSSCSTT
T ss_pred CCcChhhCCc--ccc--cCeecC-CCCEechhcCCCc
Confidence 4679999998 333 677899 88 5666555443
No 191
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=30.14 E-value=13 Score=16.67 Aligned_cols=14 Identities=29% Similarity=0.849 Sum_probs=10.2
Q ss_pred CCCCCCcccccchh
Q 032682 48 RYTCPVCSKSLWDM 61 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~ 61 (136)
.+.|+.|.+.+...
T Consensus 3 ~~~C~~C~k~f~~~ 16 (27)
T 2kvg_A 3 PYRCPLCRAGCPSL 16 (27)
T ss_dssp TEEETTTTEEESCH
T ss_pred CcCCCCCCcccCCH
Confidence 36799998887543
No 192
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.67 E-value=29 Score=17.16 Aligned_cols=16 Identities=25% Similarity=0.779 Sum_probs=12.0
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.+.....
T Consensus 10 ~~~C~~C~k~f~~~~~ 25 (42)
T 2yte_A 10 PYSCAECKETFSDNNR 25 (42)
T ss_dssp SCBCTTTCCBCSSHHH
T ss_pred CeECCCCCCccCCHHH
Confidence 4789999999865443
No 193
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=29.66 E-value=3.7 Score=24.31 Aligned_cols=41 Identities=17% Similarity=0.422 Sum_probs=25.5
Q ss_pred CCcceecCcCccCCccceEEe--c--CC-cHhhHHHHHHHHhh---cCCCCCCccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVL--R--CG-HTIHLECLKEMEKH---YRYTCPVCSK 56 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L--~--Cg-H~fh~~Cl~~~~~~---~~~~CP~Cr~ 56 (136)
+..| ||.+. .. ..++. . |. .-||..|+. +.. +...||.|++
T Consensus 9 ~~yC-~C~~~-~~---g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 9 PTYC-LCHQV-SY---GEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp CEET-TTTEE-CC---SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CcEE-ECCCC-CC---CCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccC
Confidence 3456 89886 21 22322 4 55 689999987 222 3567998853
No 194
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=29.49 E-value=28 Score=21.00 Aligned_cols=27 Identities=33% Similarity=0.738 Sum_probs=17.7
Q ss_pred ccccCCCCCCCCccchhhhhhcCCCCCC
Q 032682 86 VWILCNDCGANSHVQFHVIAHKCLSCKS 113 (136)
Q Consensus 86 ~~i~C~~C~~~~~~~~h~~~~kC~~C~s 113 (136)
+...|-+|+....... .-..+|+.||.
T Consensus 20 v~Y~C~~Cg~~~~l~~-~~~iRC~~CG~ 46 (63)
T 3h0g_L 20 MIYLCADCGARNTIQA-KEVIRCRECGH 46 (63)
T ss_dssp CCCBCSSSCCBCCCCS-SSCCCCSSSCC
T ss_pred eEEECCCCCCeeecCC-CCceECCCCCc
Confidence 4677888887654432 24468888874
No 195
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=29.45 E-value=2.4 Score=28.16 Aligned_cols=49 Identities=16% Similarity=0.206 Sum_probs=30.2
Q ss_pred CCcceecCcCccCCccceEEe--cCCcHhhHHHHHHH------H---hhcCCCCCCccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVL--RCGHTIHLECLKEM------E---KHYRYTCPVCSKSL 58 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L--~CgH~fh~~Cl~~~------~---~~~~~~CP~Cr~~~ 58 (136)
.-.|+||... +......+.= .|.-=||..|..-- + ....+.||.|+...
T Consensus 3 ~~~C~iC~~p-~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 3 VYPCGACRSE-VNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CCBCTTTCSB-CCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred cCCCCCCCCc-cCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 3579999998 3333332222 56788999998421 1 11457899997543
No 196
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=28.84 E-value=21 Score=17.97 Aligned_cols=13 Identities=23% Similarity=0.644 Sum_probs=10.2
Q ss_pred CCCCCcccccchh
Q 032682 49 YTCPVCSKSLWDM 61 (136)
Q Consensus 49 ~~CP~Cr~~~~~~ 61 (136)
.+||.|.+.+..+
T Consensus 4 ~~C~~C~k~Vy~~ 16 (31)
T 1zfo_A 4 PNCARCGKIVYPT 16 (31)
T ss_dssp CBCSSSCSBCCGG
T ss_pred CcCCccCCEEecc
Confidence 5799999998643
No 197
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.75 E-value=32 Score=17.08 Aligned_cols=15 Identities=20% Similarity=0.815 Sum_probs=11.5
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.+....
T Consensus 11 ~~~C~~C~k~f~~~~ 25 (42)
T 2eos_A 11 PYPCEICGTRFRHLQ 25 (42)
T ss_dssp CBCCSSSCCCBSSHH
T ss_pred CEECCCCCCccCCHH
Confidence 478999999986543
No 198
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.72 E-value=27 Score=17.25 Aligned_cols=15 Identities=27% Similarity=0.685 Sum_probs=11.5
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.+....
T Consensus 11 ~~~C~~C~k~f~~~~ 25 (42)
T 2ytb_A 11 PYRCDQCGKAFSQKG 25 (42)
T ss_dssp SBCCTTTTCCBSSHH
T ss_pred CeeCCCccchhCCHH
Confidence 478999999986543
No 199
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=28.66 E-value=21 Score=15.76 Aligned_cols=15 Identities=33% Similarity=0.797 Sum_probs=10.7
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|+.|.+.+....
T Consensus 3 ~~~C~~C~~~f~~~~ 17 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPT 17 (30)
T ss_dssp CEECTTTCCEESCHH
T ss_pred CccCCCCCcccCCHH
Confidence 367999988886433
No 200
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.62 E-value=16 Score=21.30 Aligned_cols=38 Identities=21% Similarity=0.447 Sum_probs=26.4
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
...|+.|.+.+.+ .. +..=|..||..| ++|-.|++.+.
T Consensus 5 ~~~C~~C~~~I~~--~~--~~a~~~~~H~~C---------F~C~~C~~~L~ 42 (70)
T 2d8x_A 5 SSGCHQCGEFIIG--RV--IKAMNNSWHPEC---------FRCDLCQEVLA 42 (70)
T ss_dssp SSBCSSSCCBCCS--CC--EEETTEEECTTT---------SBCSSSCCBCS
T ss_pred CCcCccCCCEecc--eE--EEECcccccccC---------CEeCCCCCcCC
Confidence 3579999998642 22 234477888777 57889988764
No 201
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=28.55 E-value=36 Score=19.11 Aligned_cols=18 Identities=28% Similarity=0.410 Sum_probs=12.6
Q ss_pred CCCCCCcccccchhhhHH
Q 032682 48 RYTCPVCSKSLWDMSKLW 65 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~~~ 65 (136)
.+.|++|.+.+.....+.
T Consensus 37 ~~~C~~C~~~f~~~~~L~ 54 (70)
T 1x5w_A 37 PFKCNYCSFDTKQPSNLS 54 (70)
T ss_dssp SEECSSSSCEESSHHHHH
T ss_pred CEeCCCCCCccCCHHHHH
Confidence 367999998886544443
No 202
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.47 E-value=21 Score=17.02 Aligned_cols=15 Identities=27% Similarity=0.492 Sum_probs=11.2
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|+.|.+.|....
T Consensus 9 ~~~C~~C~k~f~~~~ 23 (36)
T 2els_A 9 IFTCEYCNKVFKFKH 23 (36)
T ss_dssp CEECTTTCCEESSHH
T ss_pred CEECCCCCceeCCHH
Confidence 467999999886533
No 203
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.17 E-value=32 Score=17.59 Aligned_cols=15 Identities=40% Similarity=0.804 Sum_probs=11.6
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2eon_A 12 PYKCQVCGKAFRVSS 26 (46)
T ss_dssp SCBCSSSCCBCSSHH
T ss_pred ccCCCCCCcccCcHH
Confidence 478999999986543
No 204
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=27.76 E-value=32 Score=20.00 Aligned_cols=13 Identities=0% Similarity=-0.386 Sum_probs=9.9
Q ss_pred CCCCcceecCcCc
Q 032682 7 VNDNFYNFGLQFI 19 (136)
Q Consensus 7 ~~~~~CpIC~e~l 19 (136)
.+-..||+|...|
T Consensus 8 L~iL~CP~c~~~L 20 (56)
T 2kpi_A 8 LEILACPACHAPL 20 (56)
T ss_dssp TTSCCCSSSCSCE
T ss_pred HhheeCCCCCCcc
Confidence 3557899999875
No 205
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=27.74 E-value=23 Score=24.65 Aligned_cols=26 Identities=23% Similarity=0.452 Sum_probs=18.1
Q ss_pred cccCCCCCCCCccchhhhhhcCCCCCCc
Q 032682 87 WILCNDCGANSHVQFHVIAHKCLSCKSY 114 (136)
Q Consensus 87 ~i~C~~C~~~~~~~~h~~~~kC~~C~sy 114 (136)
...|..|+...... .-...|+.||+-
T Consensus 132 ~y~C~~Cg~~~~~~--~~~~~Cp~CG~~ 157 (165)
T 2lcq_A 132 RYVCIGCGRKFSTL--PPGGVCPDCGSK 157 (165)
T ss_dssp CEEESSSCCEESSC--CGGGBCTTTCCB
T ss_pred EEECCCCCCcccCC--CCCCcCCCCCCc
Confidence 57899999875432 123479999985
No 206
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.64 E-value=24 Score=16.75 Aligned_cols=15 Identities=33% Similarity=0.612 Sum_probs=11.2
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|+.|.+.|....
T Consensus 9 ~~~C~~C~k~f~~~~ 23 (36)
T 2elt_A 9 PYKCPQCSYASAIKA 23 (36)
T ss_dssp SEECSSSSCEESSHH
T ss_pred CCCCCCCCcccCCHH
Confidence 467999999886533
No 207
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=27.35 E-value=22 Score=21.01 Aligned_cols=41 Identities=22% Similarity=0.173 Sum_probs=26.3
Q ss_pred CcceecCcCccCCc-cceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 10 NFYNFGLQFIFDTM-KDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 10 ~~CpIC~e~lf~~~-~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
..|+.|.+.+.... ....+..=|..||..| ++|-.|++.+.
T Consensus 16 ~~C~~C~~~I~~~g~~~~~~~a~~~~~H~~C---------F~C~~C~~~L~ 57 (77)
T 2egq_A 16 KKCAGCKNPITGFGKGSSVVAYEGQSWHDYC---------FHCKKCSVNLA 57 (77)
T ss_dssp CCCSSSCCCCCCCSSCCCEEEETTEEEETTT---------CBCSSSCCBCT
T ss_pred ccCcccCCcccCCCCCceeEEECcceeCccc---------CEehhcCCCCC
Confidence 57999998864310 1122234477888776 57889988763
No 208
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=27.07 E-value=2.8 Score=24.17 Aligned_cols=12 Identities=25% Similarity=0.739 Sum_probs=8.4
Q ss_pred CCCCCCcccccc
Q 032682 48 RYTCPVCSKSLW 59 (136)
Q Consensus 48 ~~~CP~Cr~~~~ 59 (136)
..+||.|...+.
T Consensus 23 ~IrCpyCGyrii 34 (48)
T 4ayb_P 23 GVRCPYCGYKII 34 (48)
T ss_dssp SSCCTTTCCSCE
T ss_pred CcccCccCcEEE
Confidence 467888876653
No 209
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.05 E-value=34 Score=17.34 Aligned_cols=15 Identities=33% Similarity=0.649 Sum_probs=11.6
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|+.|.+.|....
T Consensus 12 ~~~C~~C~k~F~~~~ 26 (46)
T 2enf_A 12 PYKCNECGKVFTQNS 26 (46)
T ss_dssp SCBCSSSCCBCSSHH
T ss_pred CeECCCCCcccCCHH
Confidence 478999999986543
No 210
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=27.01 E-value=21 Score=23.63 Aligned_cols=29 Identities=24% Similarity=0.575 Sum_probs=21.0
Q ss_pred cccCCCCCCCCccchhhhhhcCCC--CCCccccc
Q 032682 87 WILCNDCGANSHVQFHVIAHKCLS--CKSYNTRQ 118 (136)
Q Consensus 87 ~i~C~~C~~~~~~~~h~~~~kC~~--C~synt~~ 118 (136)
.-.|.+|....+. |+.+.|.+ ||+|...+
T Consensus 24 ~~~C~~C~~~~~~---W~CL~CG~vgCgr~~~~H 54 (109)
T 3c5k_A 24 TQPCGDCGTIQEN---WVCLSCYQVYCGRYINGH 54 (109)
T ss_dssp TCCCTTTCCCSSE---EEETTTCCEEECTTTTCH
T ss_pred CCcCccccCCCCe---eeeeecCccccCCCcChH
Confidence 4569999987654 78888886 77775443
No 211
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=33.02 E-value=13 Score=16.71 Aligned_cols=12 Identities=25% Similarity=0.733 Sum_probs=9.0
Q ss_pred CCCCCcccccch
Q 032682 49 YTCPVCSKSLWD 60 (136)
Q Consensus 49 ~~CP~Cr~~~~~ 60 (136)
+.|+.|.+.+..
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 2lvt_A 3 CQCVMCGKAFTQ 14 (29)
Confidence 578889887754
No 212
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=26.98 E-value=9 Score=23.47 Aligned_cols=50 Identities=20% Similarity=0.346 Sum_probs=28.8
Q ss_pred CCCCCcceecCcCccCCccceEE-ecCCcHhhHHHHHHHHhh----cCCCCCCcccc
Q 032682 6 NVNDNFYNFGLQFIFDTMKDITV-LRCGHTIHLECLKEMEKH----YRYTCPVCSKS 57 (136)
Q Consensus 6 ~~~~~~CpIC~e~lf~~~~~~~~-L~CgH~fh~~Cl~~~~~~----~~~~CP~Cr~~ 57 (136)
+.....| ||... ++.....+. -.|.-=||..|+.--... ..+.||.|+..
T Consensus 7 ~~~~~yC-iC~~~-~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~ 61 (75)
T 3kqi_A 7 ATVPVYC-VCRLP-YDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKT 61 (75)
T ss_dssp CCCCEET-TTTEE-CCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHH
T ss_pred CCCeeEE-ECCCc-CCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCccc
Confidence 3344445 88876 332222221 168889999998543211 35789999643
No 213
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=26.91 E-value=10 Score=22.99 Aligned_cols=40 Identities=25% Similarity=0.397 Sum_probs=26.9
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
....|+.|.+.+.+.. .+..-|..||..| ++|-.|++.+.
T Consensus 6 ~~~~C~~C~~~I~~~~---~~~a~~~~~H~~C---------F~C~~C~~~L~ 45 (81)
T 1a7i_A 6 GGNKCGACGRTVYHAE---EVQCDGRSFHRCC---------FLCMVCRKNLD 45 (81)
T ss_dssp --CBCSSSCCBCSSTT---EEEETTEEEESSS---------EECSSSCCEEC
T ss_pred CCCcCcCcCccccCce---eEEeCCccccccc---------CccCCCCCCCC
Confidence 4578999999864332 2234578888776 57889988774
No 214
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=26.87 E-value=60 Score=18.30 Aligned_cols=14 Identities=29% Similarity=0.608 Sum_probs=8.8
Q ss_pred CCCCCCcccccchh
Q 032682 48 RYTCPVCSKSLWDM 61 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~ 61 (136)
.+.|+.|.+.+...
T Consensus 17 ~~~C~~C~k~f~~~ 30 (74)
T 2lce_A 17 PYKCDRCQASFRYK 30 (74)
T ss_dssp SBCCTTSSCCBSCH
T ss_pred CeECCCCCceeCCH
Confidence 35677777776543
No 215
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=26.86 E-value=23 Score=18.42 Aligned_cols=15 Identities=27% Similarity=0.738 Sum_probs=10.6
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (48)
T 2epr_A 12 QVACEICGKIFRDVY 26 (48)
T ss_dssp SEEETTTTEEESSHH
T ss_pred CeeCCCCCcccCCHH
Confidence 466999988876433
No 216
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=26.72 E-value=29 Score=19.99 Aligned_cols=24 Identities=17% Similarity=0.465 Sum_probs=15.6
Q ss_pred cccCCCCCCCCccchhhhhhcCCCCCCc
Q 032682 87 WILCNDCGANSHVQFHVIAHKCLSCKSY 114 (136)
Q Consensus 87 ~i~C~~C~~~~~~~~h~~~~kC~~C~sy 114 (136)
...|..|...... +..+|+.|..-
T Consensus 9 ~~~C~~C~GsG~~----i~~~C~~C~G~ 32 (53)
T 3lcz_A 9 ETTCPNCNGSGRE----EPEPCPKCLGK 32 (53)
T ss_dssp EEECTTTTTSCEE----TTEECTTTTTS
T ss_pred eccCcCCcccccC----CCCcCCCCCCc
Confidence 3458888777654 34678888743
No 217
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.58 E-value=35 Score=17.29 Aligned_cols=15 Identities=33% Similarity=0.649 Sum_probs=11.6
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~F~~~~ 26 (46)
T 2yti_A 12 PYKCNECGKVFTQNS 26 (46)
T ss_dssp TTCCSSSCCCCSSHH
T ss_pred CeECCCCCcccCChh
Confidence 478999999986543
No 218
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.44 E-value=25 Score=16.75 Aligned_cols=15 Identities=20% Similarity=0.603 Sum_probs=11.2
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 9 ~~~C~~C~k~f~~~~ 23 (36)
T 2elq_A 9 PFKCSLCEYATRSKS 23 (36)
T ss_dssp SEECSSSSCEESCHH
T ss_pred CccCCCCCchhCCHH
Confidence 467999999886543
No 219
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=26.41 E-value=17 Score=23.99 Aligned_cols=41 Identities=20% Similarity=0.295 Sum_probs=24.4
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSL 58 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~ 58 (136)
.+..||+|..+|- +.=|+.+|..|-..+. ....||-|..++
T Consensus 31 M~~~CP~Cq~eL~--------~~g~~~hC~~C~~~f~--~~a~CPdC~q~L 71 (101)
T 2jne_A 31 MELHCPQCQHVLD--------QDNGHARCRSCGEFIE--MKALCPDCHQPL 71 (101)
T ss_dssp CCCBCSSSCSBEE--------EETTEEEETTTCCEEE--EEEECTTTCSBC
T ss_pred ccccCccCCCcce--------ecCCEEECccccchhh--ccccCcchhhHH
Confidence 3478999998852 1113444666644332 234599997776
No 220
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=26.38 E-value=43 Score=18.93 Aligned_cols=13 Identities=31% Similarity=0.723 Sum_probs=8.3
Q ss_pred CCCCCCcccccch
Q 032682 48 RYTCPVCSKSLWD 60 (136)
Q Consensus 48 ~~~CP~Cr~~~~~ 60 (136)
.+.|++|.+.+..
T Consensus 14 ~~~C~~C~k~f~~ 26 (72)
T 1x6e_A 14 PYGCVECGKAFSR 26 (72)
T ss_dssp CEECSSSCCEESS
T ss_pred CccCCCCCCccCC
Confidence 3557777776654
No 221
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.31 E-value=36 Score=17.23 Aligned_cols=16 Identities=38% Similarity=0.754 Sum_probs=12.1
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~f~~~~~ 27 (46)
T 2eq2_A 12 PYQCNECGKAFSQTSK 27 (46)
T ss_dssp SSSCCSSCCCCSSHHH
T ss_pred CeECCCCCcccCCHHH
Confidence 4789999999865443
No 222
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=26.30 E-value=27 Score=22.72 Aligned_cols=29 Identities=28% Similarity=0.494 Sum_probs=19.8
Q ss_pred cccccCCCCCCCCccchhhhhhcCCCCCCccc
Q 032682 85 MVWILCNDCGANSHVQFHVIAHKCLSCKSYNT 116 (136)
Q Consensus 85 ~~~i~C~~C~~~~~~~~h~~~~kC~~C~synt 116 (136)
...+.|+.|+....+ .+..||..|-.|+.
T Consensus 29 H~gv~Cd~C~~~pI~---G~RykC~~C~d~DL 57 (98)
T 2dip_A 29 HLGIPCNNCKQFPIE---GKCYKCTECIEYHL 57 (98)
T ss_dssp CCCCCCSSSCCSSCC---SCEEEESSSSSCEE
T ss_pred cCCCCCcCCCCCCcc---cCeEECCCCCCccH
Confidence 345899999975433 24568888877754
No 223
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.15 E-value=26 Score=16.69 Aligned_cols=15 Identities=20% Similarity=0.671 Sum_probs=11.1
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.+....
T Consensus 9 ~~~C~~C~k~f~~~~ 23 (36)
T 2elv_A 9 LYDCHICERKFKNEL 23 (36)
T ss_dssp CEECSSSCCEESSHH
T ss_pred CeECCCCCCccCCHH
Confidence 467999998886433
No 224
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=26.08 E-value=18 Score=21.74 Aligned_cols=20 Identities=10% Similarity=-0.061 Sum_probs=14.6
Q ss_pred CCCCCCCCCcceecCcCccC
Q 032682 2 FPELNVNDNFYNFGLQFIFD 21 (136)
Q Consensus 2 ~~~~~~~~~~CpIC~e~lf~ 21 (136)
.++-..+...|.||...=|.
T Consensus 2 ~~~~~~d~~~C~iC~KTKFA 21 (62)
T 2a20_A 2 SQEQKGDAPTCGICHKTKFA 21 (62)
T ss_dssp -CCCSSCCCCCSSSSCSCCC
T ss_pred cccccCCcchhhhhccceec
Confidence 35666788999999987543
No 225
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.85 E-value=37 Score=17.24 Aligned_cols=16 Identities=25% Similarity=0.758 Sum_probs=12.1
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~f~~~~~ 27 (46)
T 2eoh_A 12 PYECKECRKTFIQIGH 27 (46)
T ss_dssp SCCCSSSCCCCSSHHH
T ss_pred CcCCCCcCchhCCHHH
Confidence 4789999999865443
No 226
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=25.84 E-value=2.7 Score=26.65 Aligned_cols=32 Identities=9% Similarity=0.040 Sum_probs=19.7
Q ss_pred ceecCcCccCCc-cceEEec-CCcHhhHHHHHHH
Q 032682 12 YNFGLQFIFDTM-KDITVLR-CGHTIHLECLKEM 43 (136)
Q Consensus 12 CpIC~e~lf~~~-~~~~~L~-CgH~fh~~Cl~~~ 43 (136)
||=|...+.... ...+.-+ ||+.||..|-..|
T Consensus 28 CP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~~w 61 (86)
T 2ct7_A 28 CAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQW 61 (86)
T ss_dssp CSSSCCCEECCCSCSCEECTTTCCEECSSSCSBC
T ss_pred CcCCCchheecCCCCceEeCCCCCccccccCCch
Confidence 887766432211 2223334 8999999998777
No 227
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.82 E-value=37 Score=17.19 Aligned_cols=16 Identities=31% Similarity=0.829 Sum_probs=12.2
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~f~~~~~ 27 (46)
T 2eoq_A 12 PFKCDICGKSFCGRSR 27 (46)
T ss_dssp SCCCSSSCCCCSSHHH
T ss_pred CcCCCcCCchhCCHHH
Confidence 4789999999865443
No 228
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=25.67 E-value=27 Score=16.44 Aligned_cols=15 Identities=13% Similarity=0.594 Sum_probs=11.2
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|+.|.+.|....
T Consensus 7 ~~~C~~C~k~f~~~~ 21 (35)
T 1srk_A 7 PFVCRICLSAFTTKA 21 (35)
T ss_dssp CEECSSSCCEESSHH
T ss_pred CeeCCCCCcccCCHH
Confidence 467999999886533
No 229
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.52 E-value=73 Score=15.99 Aligned_cols=16 Identities=25% Similarity=0.569 Sum_probs=12.0
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~f~~~~~ 27 (46)
T 2emz_A 12 PFKCNECGKGFGRRSH 27 (46)
T ss_dssp SCCCSSSCCCCSSHHH
T ss_pred CeECCCCCcccCCHHH
Confidence 4789999998865443
No 230
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.50 E-value=38 Score=16.85 Aligned_cols=15 Identities=33% Similarity=0.744 Sum_probs=11.6
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (44)
T 2en7_A 12 PYVCNECGKAFRSKS 26 (44)
T ss_dssp SSCCTTTCCCCSSHH
T ss_pred CeECCCCCCccCCHH
Confidence 478999999986543
No 231
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=25.49 E-value=14 Score=21.34 Aligned_cols=38 Identities=21% Similarity=0.285 Sum_probs=26.3
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
...|+.|.+.+. ...+..=|..||..| ++|-.|++.+.
T Consensus 5 ~~~C~~C~~~I~----~~~~~a~~~~~H~~C---------F~C~~C~~~L~ 42 (66)
T 1nyp_A 5 VPICGACRRPIE----GRVVNAMGKQWHVEH---------FVCAKCEKPFL 42 (66)
T ss_dssp CCEETTTTEECC----SCEECCTTSBEETTT---------CBCTTTCCBCS
T ss_pred CCCCcccCCEec----ceEEEECccccccCc---------CEECCCCCCCC
Confidence 357999999864 123345577888776 67889988764
No 232
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.43 E-value=15 Score=21.40 Aligned_cols=38 Identities=24% Similarity=0.308 Sum_probs=26.3
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
...|+.|.+.+.. ..+ ..=|..||..| ++|-.|++.+.
T Consensus 5 ~~~C~~C~~~I~~--~~~--~a~~~~~H~~C---------F~C~~C~~~L~ 42 (69)
T 2cur_A 5 SSGCVKCNKAITS--GGI--TYQDQPWHADC---------FVCVTCSKKLA 42 (69)
T ss_dssp CCCCSSSCCCCCT--TCE--EETTEEECTTT---------TBCTTTCCBCT
T ss_pred cCCCcccCCEeCc--ceE--EECccccccCc---------CEECCCCCCCC
Confidence 3579999998643 222 33478888776 57889988763
No 233
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.38 E-value=37 Score=17.19 Aligned_cols=15 Identities=20% Similarity=0.594 Sum_probs=11.6
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2emg_A 12 PFICSECGKVFTHKT 26 (46)
T ss_dssp SCBCTTTCCBCSSHH
T ss_pred CEECCccCcccCCHH
Confidence 478999999986543
No 234
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.37 E-value=39 Score=17.16 Aligned_cols=16 Identities=25% Similarity=0.588 Sum_probs=12.0
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|+.|.+.|.....
T Consensus 12 ~~~C~~C~k~f~~~~~ 27 (46)
T 2yth_A 12 PFQCEECGKRFTQNSH 27 (46)
T ss_dssp SBCCSSSCCCBSSHHH
T ss_pred CCCCCCCCcccCCHHH
Confidence 4789999999865443
No 235
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=25.37 E-value=26 Score=16.46 Aligned_cols=12 Identities=33% Similarity=1.124 Sum_probs=9.3
Q ss_pred CCCCCcccccch
Q 032682 49 YTCPVCSKSLWD 60 (136)
Q Consensus 49 ~~CP~Cr~~~~~ 60 (136)
+.|+.|.+.+..
T Consensus 3 ~~C~~C~k~f~~ 14 (32)
T 2kfq_A 3 FACPACPKRFMR 14 (32)
T ss_dssp SSSSSSCTTHHH
T ss_pred CCCCCCCcccCC
Confidence 679999888743
No 236
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.20 E-value=39 Score=17.07 Aligned_cols=16 Identities=25% Similarity=0.636 Sum_probs=12.1
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~F~~~~~ 27 (47)
T 2epx_A 12 PYECIECGKAFIQNTS 27 (47)
T ss_dssp SBCCSSSCCCBSSHHH
T ss_pred CEECCccCchhCChHH
Confidence 4789999999865443
No 237
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.09 E-value=39 Score=17.04 Aligned_cols=16 Identities=38% Similarity=0.628 Sum_probs=12.1
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~f~~~~~ 27 (46)
T 2eov_A 12 PYKCSDCGKSFTWKSR 27 (46)
T ss_dssp SCBCSSSCCBCSSHHH
T ss_pred CccCCccChhhCCHHH
Confidence 4789999999865443
No 238
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=25.03 E-value=4.7 Score=23.85 Aligned_cols=40 Identities=20% Similarity=0.468 Sum_probs=24.8
Q ss_pred CcceecCcCccCCccceEEe--c--CC-cHhhHHHHHHHHhh---cCCCCCCccc
Q 032682 10 NFYNFGLQFIFDTMKDITVL--R--CG-HTIHLECLKEMEKH---YRYTCPVCSK 56 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L--~--Cg-H~fh~~Cl~~~~~~---~~~~CP~Cr~ 56 (136)
..| ||... .. ..++. . |. .-||..|+. +.. +...||.|++
T Consensus 11 ~~C-~C~~~-~~---g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 11 TYC-LCHQV-SY---GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp EET-TTTEE-CC---SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CEE-ECCCc-CC---CCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccC
Confidence 456 89886 21 23322 4 54 579999997 332 4567998853
No 239
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=24.80 E-value=36 Score=18.83 Aligned_cols=14 Identities=14% Similarity=0.330 Sum_probs=6.5
Q ss_pred hcCCCCC-Ccccccc
Q 032682 106 HKCLSCK-SYNTRQT 119 (136)
Q Consensus 106 ~kC~~C~-synt~~~ 119 (136)
++|..|| -|....|
T Consensus 25 lvC~~CG~v~~e~~i 39 (50)
T 1pft_A 25 IVCAKCGYVIEENII 39 (50)
T ss_dssp EEESSSCCBCCCCCC
T ss_pred EECcccCCccccccc
Confidence 3555555 3333444
No 240
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.70 E-value=40 Score=17.10 Aligned_cols=15 Identities=40% Similarity=0.791 Sum_probs=11.6
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2em6_A 12 CYKCDVCGKEFSQSS 26 (46)
T ss_dssp CCBCSSSCCBCSSHH
T ss_pred CeECCCCCcccCCHH
Confidence 478999999986543
No 241
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=24.68 E-value=22 Score=21.90 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=26.4
Q ss_pred CcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
..|+.|.+.+.. . .+..-|..||..| ++|-.|++.+.
T Consensus 26 ~~C~~C~~~I~~--~--~~~a~~~~~H~~C---------F~C~~C~~~L~ 62 (89)
T 1x64_A 26 PLCDKCGSGIVG--A--VVKARDKYRHPEC---------FVCADCNLNLK 62 (89)
T ss_dssp CBCTTTCCBCCS--C--CEESSSCEECTTT---------CCCSSSCCCTT
T ss_pred CCcccCCCEecc--c--EEEECCceECccC---------CEecCCCCCCC
Confidence 569999998643 2 2335678888777 57889987764
No 242
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.59 E-value=74 Score=16.01 Aligned_cols=16 Identities=38% Similarity=0.692 Sum_probs=11.8
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~f~~~~~ 27 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSS 27 (46)
T ss_dssp SSSBTTTTBCCSSHHH
T ss_pred CcCCCCCCchhCCHHH
Confidence 4779999988865443
No 243
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.56 E-value=39 Score=17.03 Aligned_cols=15 Identities=33% Similarity=0.735 Sum_probs=11.6
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2ytr_A 12 PYKCNECGKAFSQTS 26 (46)
T ss_dssp TTCCTTTCCCCSSHH
T ss_pred CcCCCCCCCccCCHH
Confidence 478999999986543
No 244
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.56 E-value=41 Score=17.14 Aligned_cols=16 Identities=25% Similarity=0.468 Sum_probs=12.1
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~F~~~~~ 27 (46)
T 2eom_A 12 GHRCSDCGKFFLQASN 27 (46)
T ss_dssp SCCCSSSCCCCSSHHH
T ss_pred CcCCCCCCCeeCChHH
Confidence 4789999999865443
No 245
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=24.35 E-value=41 Score=17.00 Aligned_cols=16 Identities=19% Similarity=0.513 Sum_probs=12.1
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~F~~~~~ 27 (46)
T 2em0_A 12 TWKCRECDMCFSQASS 27 (46)
T ss_dssp CCCCSSSCCCCSSHHH
T ss_pred CeECCCCCcccCCHHH
Confidence 4789999999865443
No 246
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.19 E-value=24 Score=16.92 Aligned_cols=15 Identities=47% Similarity=1.041 Sum_probs=11.3
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|+.|.+.|....
T Consensus 9 ~~~C~~C~k~f~~~~ 23 (37)
T 2elo_A 9 SYSCPVCEKSFSEDR 23 (37)
T ss_dssp CCEETTTTEECSSHH
T ss_pred CcCCCCCCCccCCHH
Confidence 477999999886543
No 247
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=29.98 E-value=16 Score=16.36 Aligned_cols=12 Identities=33% Similarity=0.899 Sum_probs=9.0
Q ss_pred CCCCCcccccch
Q 032682 49 YTCPVCSKSLWD 60 (136)
Q Consensus 49 ~~CP~Cr~~~~~ 60 (136)
+.|+.|.+.+..
T Consensus 4 ~~C~~C~k~f~~ 15 (30)
T 2lvr_A 4 YVCIHCQRQFAD 15 (30)
Confidence 678899887754
No 248
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=24.09 E-value=41 Score=17.05 Aligned_cols=17 Identities=29% Similarity=0.727 Sum_probs=12.6
Q ss_pred CCCCCCcccccchhhhH
Q 032682 48 RYTCPVCSKSLWDMSKL 64 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~~ 64 (136)
.+.|++|.+.|.....+
T Consensus 12 ~~~C~~C~k~F~~~~~L 28 (46)
T 2emk_A 12 PYECKECGKAFSQTTHL 28 (46)
T ss_dssp SCBCSSSCCBCSCHHHH
T ss_pred ceECCCCCchhCCHHHH
Confidence 47899999998654433
No 249
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.07 E-value=41 Score=17.08 Aligned_cols=16 Identities=25% Similarity=0.590 Sum_probs=12.1
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~F~~~~~ 27 (46)
T 2en9_A 12 LFKCNECKKTFTQSSS 27 (46)
T ss_dssp CCBCTTTCCBCSSHHH
T ss_pred CEECCccCcccCCHHH
Confidence 4789999999865443
No 250
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.00 E-value=41 Score=16.95 Aligned_cols=15 Identities=33% Similarity=0.379 Sum_probs=11.7
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2eop_A 12 PHECRECGKSFSFNS 26 (46)
T ss_dssp SCBCTTTCCBCSSHH
T ss_pred CeeCCCCCchhCCHH
Confidence 478999999986543
No 251
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.90 E-value=77 Score=15.71 Aligned_cols=16 Identities=25% Similarity=0.418 Sum_probs=11.9
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~f~~~~~ 27 (44)
T 2eou_A 12 TSECQECGKIFRHSSL 27 (44)
T ss_dssp CCCCTTTCCCCSSHHH
T ss_pred CeECCCCCcccCCHHH
Confidence 4779999999865443
No 252
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.74 E-value=26 Score=21.64 Aligned_cols=39 Identities=15% Similarity=0.443 Sum_probs=27.9
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
...|+.|.+.+.+. . .+..=|..||..| ++|-.|++.+.
T Consensus 15 ~~~C~~C~~~I~~~--~-~v~a~~~~~H~~C---------F~C~~C~~~L~ 53 (91)
T 2d8y_A 15 RETCVECQKTVYPM--E-RLLANQQVFHISC---------FRCSYCNNKLS 53 (91)
T ss_dssp SCBCTTTCCBCCTT--S-EEECSSSEEETTT---------CBCTTTCCBCC
T ss_pred CCcCccCCCccCCc--e-eEEECCCEECCCC---------CeeCCCCCCCC
Confidence 46799999997532 2 2345678888877 57889988774
No 253
>2dlo_A Thyroid receptor-interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.63 E-value=16 Score=21.99 Aligned_cols=39 Identities=28% Similarity=0.447 Sum_probs=26.3
Q ss_pred CCCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 8 NDNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 8 ~~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
....|+.|.+.+.+ . ++..=|..||..| ++|..|++.+.
T Consensus 14 ~~~~C~~C~~~I~~--~--~~~a~~~~~H~~C---------F~C~~C~~~L~ 52 (81)
T 2dlo_A 14 TLEKCATCSQPILD--R--ILRAMGKAYHPGC---------FTCVVCHRGLD 52 (81)
T ss_dssp SCCBCTTTCCBCCS--C--CEEETTEEECTTT---------CBCSSSCCBCT
T ss_pred CCCccccCCCeecc--e--eEEECCccccHHh---------cCcccCCCccC
Confidence 34678899988642 2 2234577888776 67899987763
No 254
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.57 E-value=43 Score=16.93 Aligned_cols=15 Identities=27% Similarity=0.594 Sum_probs=11.6
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2epz_A 12 PFDCIDCGKAFSDHI 26 (46)
T ss_dssp SBCCTTTCCCBSSHH
T ss_pred CeECCCCCceeCCHH
Confidence 478999999986543
No 255
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.52 E-value=42 Score=16.95 Aligned_cols=15 Identities=33% Similarity=0.649 Sum_probs=11.7
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~F~~~~ 26 (46)
T 2ytn_A 12 PYKCNECGKVFTQNS 26 (46)
T ss_dssp SCBCTTTCCBCSSHH
T ss_pred CeECCCCCCeeCCHH
Confidence 478999999986543
No 256
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.38 E-value=45 Score=16.79 Aligned_cols=15 Identities=40% Similarity=0.769 Sum_probs=11.7
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|+.|.+.|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2ep1_A 12 PYECSDCGKSFIKKS 26 (46)
T ss_dssp SSCCSSSCCCCSSHH
T ss_pred CcCCCCCCchhCCHH
Confidence 478999999986544
No 257
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.34 E-value=43 Score=16.95 Aligned_cols=15 Identities=33% Similarity=0.711 Sum_probs=11.6
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2ytq_A 12 PYGCSECGKAFSSKS 26 (46)
T ss_dssp SCBCSSSCCBCSCHH
T ss_pred CcCCCccChhhCChH
Confidence 478999999986543
No 258
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.33 E-value=43 Score=16.93 Aligned_cols=15 Identities=33% Similarity=0.731 Sum_probs=11.6
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|+.|.+.|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2eq1_A 12 PYKCNECGKAFRAHS 26 (46)
T ss_dssp CCCCTTTTCCCSSHH
T ss_pred CeECCcCChhhCCHH
Confidence 478999999986543
No 259
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.28 E-value=44 Score=16.91 Aligned_cols=15 Identities=27% Similarity=0.510 Sum_probs=11.7
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~F~~~~ 26 (46)
T 2elz_A 12 PYKCEDCGKGYNRRL 26 (46)
T ss_dssp SCBCSSSCCBCSSHH
T ss_pred CeeCcccCchhCCHH
Confidence 478999999986543
No 260
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=23.20 E-value=19 Score=21.37 Aligned_cols=42 Identities=14% Similarity=0.257 Sum_probs=23.8
Q ss_pred cceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCc
Q 032682 11 FYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVC 54 (136)
Q Consensus 11 ~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~C 54 (136)
.|-.|+..+ .......--.|++.||.+|= .++...--.||-|
T Consensus 17 ~C~~C~~~~-~~~~~y~C~~C~~~FC~dCD-~fiHe~Lh~CPgC 58 (59)
T 1z60_A 17 FCYGCQGEL-KDQHVYVCAVCQNVFCVDCD-VFVHDSLHSCPGC 58 (59)
T ss_dssp EETTTTEEC-TTSEEECCTTTTCCBCHHHH-HTTTTTSCSSSTT
T ss_pred cccccCccc-CCCccEECCccCcCcccchh-HHHHhhccCCcCC
Confidence 588888873 21111222378899999983 3332222348877
No 261
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.19 E-value=38 Score=17.19 Aligned_cols=15 Identities=33% Similarity=0.788 Sum_probs=11.5
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~F~~~~ 26 (46)
T 2enh_A 12 PYECDVCRKAFSHHA 26 (46)
T ss_dssp SCBCTTTCCBCSSSH
T ss_pred CcCCCCcCchhCCHH
Confidence 478999999986533
No 262
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=23.16 E-value=31 Score=16.99 Aligned_cols=16 Identities=31% Similarity=0.615 Sum_probs=11.9
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|+.|.+.|.....
T Consensus 11 ~~~C~~C~k~f~~~~~ 26 (42)
T 2epc_A 11 PYLCGQCGKSFTQRGS 26 (42)
T ss_dssp CEECSSSCCEESSHHH
T ss_pred CeECCCCCcccCCHHH
Confidence 4679999999865443
No 263
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.09 E-value=31 Score=16.70 Aligned_cols=15 Identities=27% Similarity=0.470 Sum_probs=11.2
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|+.|.+.|....
T Consensus 9 ~~~C~~C~k~f~~~~ 23 (37)
T 2elm_A 9 LYYCSQCHYSSITKN 23 (37)
T ss_dssp EEECSSSSCEEECHH
T ss_pred CeECCCCCcccCCHH
Confidence 367999999986543
No 264
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.07 E-value=18 Score=21.58 Aligned_cols=37 Identities=14% Similarity=0.238 Sum_probs=25.9
Q ss_pred CcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
..|+-|.+.+.. . .+..-|..||..| ++|-.|++.+.
T Consensus 6 ~~C~~C~~~I~~--~--~v~a~~~~wH~~C---------F~C~~C~~~L~ 42 (73)
T 1wig_A 6 SGCDSCEKYITG--R--VLEAGEKHYHPSC---------ALCVRCGQMFA 42 (73)
T ss_dssp CSCSSSCCCCSS--C--CBCCSSCCBCTTT---------SCCSSSCCCCC
T ss_pred CCcccCCCEecC--e--eEEeCCCCCCCCc---------CEeCCCCCCCC
Confidence 579999998643 2 2234578888776 67889988764
No 265
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=22.94 E-value=40 Score=17.11 Aligned_cols=16 Identities=25% Similarity=0.544 Sum_probs=12.1
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~f~~~~~ 27 (46)
T 2ely_A 12 PFKCVECGKGFSRRSA 27 (46)
T ss_dssp SBCCSSSCCCBSSTTH
T ss_pred CcccCccCcccCCHHH
Confidence 4789999999865443
No 266
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=22.86 E-value=22 Score=22.61 Aligned_cols=40 Identities=15% Similarity=0.257 Sum_probs=21.7
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSL 58 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~ 58 (136)
+..||.|...|... . ++.+|..|-..+.. ...||-|...+
T Consensus 2 ~~~CP~C~~~l~~~-~-------~~~~C~~C~~~~~~--~afCPeCgq~L 41 (81)
T 2jrp_A 2 EITCPVCHHALERN-G-------DTAHCETCAKDFSL--QALCPDCRQPL 41 (81)
T ss_dssp CCCCSSSCSCCEEC-S-------SEEECTTTCCEEEE--EEECSSSCSCC
T ss_pred CCCCCCCCCccccC-C-------CceECccccccCCC--cccCcchhhHH
Confidence 37899999886321 1 13334444332211 23688887665
No 267
>1j2o_A FLIN2, fusion of rhombotin-2 and LIM domain-binding protein 1; LIM-interaction-domain (LID), metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=22.61 E-value=39 Score=21.79 Aligned_cols=39 Identities=21% Similarity=0.155 Sum_probs=25.7
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
...|+-|.+.+.+. .++..=|..+|..| ++|-.|++.+.
T Consensus 3 ~~~C~~C~~~I~~~---~~~~a~~~~wH~~C---------F~C~~C~~~L~ 41 (114)
T 1j2o_A 3 LLTCGGCQQNIGDR---YFLKAIDQYWHEDC---------LSCDLCGCRLG 41 (114)
T ss_dssp CBCBSSSCSCBCSS---EEEECSSSEECTTT---------CCCSSSCSCCC
T ss_pred CCCCcCCCCeeCCc---EEEEECchhHHHhc---------CcccccCCchh
Confidence 45788898886432 12234567777766 67888887774
No 268
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.49 E-value=33 Score=17.38 Aligned_cols=16 Identities=38% Similarity=0.725 Sum_probs=11.9
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~f~~~~~ 27 (46)
T 2yts_A 12 PYICNECGKSFIQKSH 27 (46)
T ss_dssp SEECSSSCCEESSHHH
T ss_pred CEECCCCChhhCChHH
Confidence 4679999999865443
No 269
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=22.28 E-value=32 Score=21.60 Aligned_cols=31 Identities=19% Similarity=0.508 Sum_probs=20.4
Q ss_pred cccccCCCCCCCCccchhhhhhcCCCCCC---ccccc
Q 032682 85 MVWILCNDCGANSHVQFHVIAHKCLSCKS---YNTRQ 118 (136)
Q Consensus 85 ~~~i~C~~C~~~~~~~~h~~~~kC~~C~s---ynt~~ 118 (136)
...+.|+.|+...-+ ..+.||..|.. |+..+
T Consensus 19 H~~~~Cd~C~~~pI~---G~RykC~~C~d~~~yDLC~ 52 (82)
T 2fc7_A 19 HVGFKCDNCGIEPIQ---GVRWHCQDCPPEMSLDFCD 52 (82)
T ss_dssp ESSCCCSSSCCSSEE---SCEEEESSSCSSSCCEEEG
T ss_pred eCcCCCCCCCCCcce---eceEECCcCCCCcceecHH
Confidence 346889999875333 24568888877 65443
No 270
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.18 E-value=87 Score=15.67 Aligned_cols=16 Identities=31% Similarity=0.675 Sum_probs=11.6
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~f~~~~~ 27 (46)
T 2ytt_A 12 PYQCSECGKSFSGSYR 27 (46)
T ss_dssp TTCCSSSCCCCSSHHH
T ss_pred CeeCCCCCcccCCHHH
Confidence 4779999988865443
No 271
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=22.11 E-value=34 Score=16.91 Aligned_cols=15 Identities=27% Similarity=0.671 Sum_probs=11.4
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 10 ~~~C~~C~k~f~~~~ 24 (42)
T 2el5_A 10 PYECSECGKAFNRKD 24 (42)
T ss_dssp SEECSSSCCEESSHH
T ss_pred CccCCCcChhhCCHH
Confidence 467999999986543
No 272
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.11 E-value=62 Score=15.78 Aligned_cols=16 Identities=19% Similarity=0.686 Sum_probs=11.8
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|+.|.+.+.....
T Consensus 11 ~~~C~~C~k~f~~~~~ 26 (42)
T 2en2_A 11 PYKCETCGARFVQVAH 26 (42)
T ss_dssp SEECTTTCCEESSHHH
T ss_pred CEeCCCcChhhCCHHH
Confidence 4679999998865443
No 273
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.00 E-value=31 Score=16.52 Aligned_cols=14 Identities=21% Similarity=0.558 Sum_probs=10.7
Q ss_pred CCCCCCcccccchh
Q 032682 48 RYTCPVCSKSLWDM 61 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~ 61 (136)
.+.|+.|.+.|...
T Consensus 9 ~~~C~~C~k~f~~~ 22 (37)
T 2elp_A 9 AMKCPYCDFYFMKN 22 (37)
T ss_dssp CEECSSSSCEECSS
T ss_pred CeECCCCChhhccC
Confidence 46799999888654
No 274
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=21.75 E-value=28 Score=21.66 Aligned_cols=40 Identities=20% Similarity=0.139 Sum_probs=23.4
Q ss_pred CCcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 9 DNFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 9 ~~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
...|+.|.+.+..... ++..=|..||..| ++|-.|++.+.
T Consensus 5 ~~~C~~C~~~I~~~~~--~~~a~~~~~H~~C---------F~C~~C~~~L~ 44 (101)
T 2cup_A 5 SSGCVECRKPIGADSK--EVHYKNRFWHDTC---------FRCAKCLHPLA 44 (101)
T ss_dssp CCBCSSSCCBCCSSSC--EEEETTEEEETTT---------CCCSSSCCCTT
T ss_pred CCcCcccCCcccCCce--EEEECccChhhcC---------CcccccCCCCC
Confidence 3568888887532112 2223466777666 46777777663
No 275
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.69 E-value=35 Score=16.79 Aligned_cols=15 Identities=33% Similarity=0.727 Sum_probs=11.3
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|+.|.+.|....
T Consensus 10 ~~~C~~C~k~f~~~~ 24 (41)
T 2ept_A 10 VYECQECGKSFRQKG 24 (41)
T ss_dssp CEECSSSCCEESSHH
T ss_pred CeECCCCCCCcCCHH
Confidence 467999999986533
No 276
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=21.61 E-value=57 Score=21.25 Aligned_cols=27 Identities=15% Similarity=0.245 Sum_probs=15.0
Q ss_pred CCcHhhHHHHHHHHhhcCCCCCCccccc
Q 032682 31 CGHTIHLECLKEMEKHYRYTCPVCSKSL 58 (136)
Q Consensus 31 CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~ 58 (136)
=|..||..|+.+.+. ...+|..|.+.+
T Consensus 50 ~g~~yC~~~y~~~~~-~~~~C~~C~~~I 76 (131)
T 2xjy_A 50 LGRKLCRRDYLRLFG-QDGLCASCDKRI 76 (131)
T ss_dssp TTEEECHHHHHHHHC-CCEECTTTCCEE
T ss_pred CCEEeecCchhhhCC-CccChhhcCCcc
Confidence 356666666665432 112677776665
No 277
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.56 E-value=35 Score=17.31 Aligned_cols=15 Identities=33% Similarity=0.809 Sum_probs=11.5
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~F~~~~ 26 (46)
T 2emi_A 12 HYECSECGKAFIQKS 26 (46)
T ss_dssp CEECSSSCCEESSHH
T ss_pred CCCCCCCCcccCCHH
Confidence 467999999986543
No 278
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.55 E-value=35 Score=17.31 Aligned_cols=15 Identities=33% Similarity=0.680 Sum_probs=11.5
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2ene_A 12 PYKCNECGKVFRHNS 26 (46)
T ss_dssp SEECSSSCCEESSHH
T ss_pred CeECCCCCchhCChH
Confidence 467999999986543
No 279
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.38 E-value=35 Score=17.27 Aligned_cols=17 Identities=35% Similarity=0.718 Sum_probs=12.4
Q ss_pred CCCCCCcccccchhhhH
Q 032682 48 RYTCPVCSKSLWDMSKL 64 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~~ 64 (136)
.+.|++|.+.|.....+
T Consensus 12 ~~~C~~C~k~f~~~~~L 28 (46)
T 2eow_A 12 PYKCNECGKAFRARSSL 28 (46)
T ss_dssp CEECTTSCCEESSHHHH
T ss_pred CeeccccCChhcCHHHH
Confidence 46799999998654433
No 280
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.36 E-value=73 Score=15.97 Aligned_cols=16 Identities=25% Similarity=0.484 Sum_probs=11.6
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~f~~~~~ 27 (46)
T 2em8_A 12 PYKCVECGKGYKRRLD 27 (46)
T ss_dssp SEECSSSCCEESSHHH
T ss_pred CeECcccCchhCCHHH
Confidence 4679999988865443
No 281
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=21.34 E-value=46 Score=19.87 Aligned_cols=7 Identities=29% Similarity=0.899 Sum_probs=3.5
Q ss_pred cCCCCCC
Q 032682 107 KCLSCKS 113 (136)
Q Consensus 107 kC~~C~s 113 (136)
.|+.||+
T Consensus 19 ~CP~CG~ 25 (60)
T 2aus_D 19 TCPVCGE 25 (60)
T ss_dssp BCTTTCS
T ss_pred cCcCCCC
Confidence 4555553
No 282
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.33 E-value=72 Score=15.91 Aligned_cols=16 Identities=31% Similarity=0.708 Sum_probs=11.7
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~f~~~~~ 27 (46)
T 2eor_A 12 PYNCEECGKAFIHDSQ 27 (46)
T ss_dssp SEECTTTCCEESSHHH
T ss_pred CccCCCCCCCcCCHHH
Confidence 4679999998865443
No 283
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=21.28 E-value=36 Score=17.32 Aligned_cols=16 Identities=31% Similarity=0.594 Sum_probs=12.0
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~F~~~~~ 27 (46)
T 2emj_A 12 PFECAECGKSFSISSQ 27 (46)
T ss_dssp SEECSSSSCEESSHHH
T ss_pred CEECCCCCcccCCHHH
Confidence 4679999999865443
No 284
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.25 E-value=36 Score=17.21 Aligned_cols=16 Identities=25% Similarity=0.627 Sum_probs=11.9
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~f~~~~~ 27 (46)
T 2ytf_A 12 PFECSECQKAFNTKSN 27 (46)
T ss_dssp SEECSSSCCEESSHHH
T ss_pred CcCCCCCCcccCCHHH
Confidence 4679999999865443
No 285
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.01 E-value=36 Score=17.26 Aligned_cols=15 Identities=27% Similarity=0.594 Sum_probs=11.5
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2em7_A 12 PYKCEECGKGFICRR 26 (46)
T ss_dssp SEECSSSCCEESCHH
T ss_pred CccCCCccchhCCHH
Confidence 467999999986543
No 286
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=20.90 E-value=19 Score=20.77 Aligned_cols=39 Identities=26% Similarity=0.362 Sum_probs=25.5
Q ss_pred CcceecCcCccCCccceEEecCCcHhh--HHHHHHHHhhcCCCCCCcccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVLRCGHTIH--LECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L~CgH~fh--~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
..|+-|.+.+..... .+..=|..+| ..| ++|-.|++.+.
T Consensus 3 ~~C~~C~~~I~~~~~--~v~a~~~~wH~~~~C---------F~C~~C~~~L~ 43 (65)
T 2iyb_E 3 VVCQGCHNAIDPEVQ--RVTYNNFSWHASTEC---------FLCSCCSKCLI 43 (65)
T ss_dssp EECTTTSSEECTTSC--EEEETTEEEETTTTT---------SBCTTTCCBCT
T ss_pred CCCcCCCCeeccCce--EEEECCCccCCCCCC---------EECCCCCCcCC
Confidence 358888888642112 2234478888 777 67889987763
No 287
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=20.86 E-value=1.1e+02 Score=26.62 Aligned_cols=37 Identities=14% Similarity=0.199 Sum_probs=26.5
Q ss_pred CcceecCcCccCC------ccceEEecCCcHhhHHHHHHHHhh
Q 032682 10 NFYNFGLQFIFDT------MKDITVLRCGHTIHLECLKEMEKH 46 (136)
Q Consensus 10 ~~CpIC~e~lf~~------~~~~~~L~CgH~fh~~Cl~~~~~~ 46 (136)
..||+|.-.+.+. ...---|+||-.||..|++.+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~c~~c~~~~~~~ 56 (776)
T 4gut_A 14 ATCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRS 56 (776)
T ss_dssp CSSCCBSCCCSTTCCTTSCBSCEEEEETTEEEEHHHHHHHHST
T ss_pred ccccHHHHHHHHHHHhCCCCcceeEeccccchhHHHHHHHhcc
Confidence 6789998765221 123345799999999999988653
No 288
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.82 E-value=45 Score=16.79 Aligned_cols=16 Identities=31% Similarity=0.577 Sum_probs=12.1
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~f~~~~~ 27 (46)
T 2eq4_A 12 LYNCKECGKSFSRAPC 27 (46)
T ss_dssp CCCBTTTTBCCSCHHH
T ss_pred CeECCCCCCccCchHH
Confidence 4789999999865443
No 289
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=20.79 E-value=36 Score=16.55 Aligned_cols=15 Identities=27% Similarity=0.822 Sum_probs=11.3
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.+....
T Consensus 6 ~~~C~~C~k~f~~~~ 20 (39)
T 1njq_A 6 SYTCSFCKREFRSAQ 20 (39)
T ss_dssp SEECTTTCCEESSHH
T ss_pred ceECCCCCcccCCHH
Confidence 467999999886543
No 290
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.77 E-value=37 Score=17.20 Aligned_cols=17 Identities=41% Similarity=0.839 Sum_probs=12.4
Q ss_pred CCCCCCcccccchhhhH
Q 032682 48 RYTCPVCSKSLWDMSKL 64 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~~ 64 (136)
.+.|++|.+.|.....+
T Consensus 12 ~~~C~~C~k~F~~~~~L 28 (46)
T 2em3_A 12 PYECKVCSKAFTQKAHL 28 (46)
T ss_dssp SEECSSSCCEESSHHHH
T ss_pred CeECCCCCcccCCHHHH
Confidence 46799999998654433
No 291
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.74 E-value=19 Score=21.72 Aligned_cols=39 Identities=23% Similarity=0.330 Sum_probs=24.1
Q ss_pred CcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
..|+.|.+.+..... . +-.=|..+|..| ++|-.|++.+.
T Consensus 16 ~~C~~C~~~I~~~~~-~-~~a~~~~~H~~C---------F~C~~C~~~L~ 54 (82)
T 2ehe_A 16 NTCAECQQLIGHDSR-E-LFYEDRHFHEGC---------FRCCRCQRSLA 54 (82)
T ss_dssp CBCTTTCCBCCSSCC-B-CCCSSCCCBTTT---------SBCTTTCCBCS
T ss_pred CcCccCCCccccCcE-E-EEeCCccccccC---------CeecCCCCccC
Confidence 468888888641111 1 112367777766 67889987763
No 292
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.72 E-value=37 Score=17.25 Aligned_cols=15 Identities=20% Similarity=0.366 Sum_probs=11.6
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2em5_A 12 SHQCHECGRGFTLKS 26 (46)
T ss_dssp SEECSSSCCEESSHH
T ss_pred CeECCcCCCccCCHH
Confidence 467999999986544
No 293
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.69 E-value=55 Score=16.32 Aligned_cols=16 Identities=13% Similarity=0.430 Sum_probs=12.0
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|+.|.+.+.....
T Consensus 10 ~~~C~~C~k~f~~~~~ 25 (43)
T 2yrm_A 10 AFFCNECDCRFSEEAS 25 (43)
T ss_dssp CBCCSSSCCCBSSHHH
T ss_pred CEECCCCCCeeCChHH
Confidence 4789999999865443
No 294
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.56 E-value=21 Score=21.46 Aligned_cols=37 Identities=30% Similarity=0.416 Sum_probs=25.0
Q ss_pred CcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCcccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSLW 59 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~~ 59 (136)
..|+.|.+.+.+ .. +..=|..||..| ++|-.|++.+.
T Consensus 16 ~~C~~C~~~I~~--~~--v~a~~~~wH~~C---------F~C~~C~~~L~ 52 (81)
T 1v6g_A 16 TRCFSCDQFIEG--EV--VSALGKTYHPDC---------FVCAVCRLPFP 52 (81)
T ss_dssp CBCTTTCCBCCS--CC--EEETTEEECTTT---------SSCSSSCCCCC
T ss_pred CcCccccCEecc--ce--EEECCceeCccC---------CccccCCCCCC
Confidence 478889888642 22 224477888776 57888987764
No 295
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.52 E-value=38 Score=17.16 Aligned_cols=16 Identities=38% Similarity=0.777 Sum_probs=11.9
Q ss_pred CCCCCCcccccchhhh
Q 032682 48 RYTCPVCSKSLWDMSK 63 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~~ 63 (136)
.+.|++|.+.|.....
T Consensus 12 ~~~C~~C~k~f~~~~~ 27 (46)
T 2ep3_A 12 PYRCAECGKAFTDRSN 27 (46)
T ss_dssp SEECSSSCCEESSHHH
T ss_pred CeECCCCCchhCCHHH
Confidence 4679999999865443
No 296
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.51 E-value=25 Score=20.92 Aligned_cols=36 Identities=19% Similarity=0.256 Sum_probs=24.9
Q ss_pred CcceecCcCccCCccceEEecCCcHhhHHHHHHHHhhcCCCCCCccccc
Q 032682 10 NFYNFGLQFIFDTMKDITVLRCGHTIHLECLKEMEKHYRYTCPVCSKSL 58 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~~~~~L~CgH~fh~~Cl~~~~~~~~~~CP~Cr~~~ 58 (136)
..|+.|.+.+.. . .+..=|..||..| ++|-.|++.+
T Consensus 16 ~~C~~C~~~I~~--~--~v~a~~~~~H~~C---------F~C~~C~~~L 51 (80)
T 2cuq_A 16 PRCARCSKTLTQ--G--GVTYRDQPWHREC---------LVCTGCQTPL 51 (80)
T ss_dssp CCCTTTCCCCCS--C--CEESSSSEECTTT---------CBCSSSCCBC
T ss_pred CcCCCCCCEecC--c--EEEECCchhhhhh---------CCcccCCCcC
Confidence 568888888643 2 2234577888766 5788998776
No 297
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.46 E-value=38 Score=17.15 Aligned_cols=15 Identities=33% Similarity=0.797 Sum_probs=11.5
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2eml_A 12 PYECSVCGKAFSHRQ 26 (46)
T ss_dssp SEECSSSCCEESSHH
T ss_pred CeeCCCcCCccCCHH
Confidence 467999999986544
No 298
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=20.32 E-value=22 Score=28.28 Aligned_cols=32 Identities=13% Similarity=0.107 Sum_probs=0.0
Q ss_pred CcceecCcCccCCcc-ceEEecCCcHhhHHHHHH
Q 032682 10 NFYNFGLQFIFDTMK-DITVLRCGHTIHLECLKE 42 (136)
Q Consensus 10 ~~CpIC~e~lf~~~~-~~~~L~CgH~fh~~Cl~~ 42 (136)
..|.+|... |.... .-.--.||+.||..|...
T Consensus 376 ~~c~~c~~~-f~~~~r~h~Cr~Cg~~~C~~Cs~~ 408 (434)
T 3mpx_A 376 MMCMNCGCD-FSLTLRRHHCHACGKIVCRNCSRN 408 (434)
T ss_dssp ----------------------------------
T ss_pred CcCCCcCCC-CCCcchhhhcccCcCEeehhhCCC
Confidence 569999988 54322 223347899999998654
No 299
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=20.31 E-value=21 Score=21.00 Aligned_cols=16 Identities=19% Similarity=0.403 Sum_probs=11.0
Q ss_pred HhhcCCCCCCcccccc
Q 032682 44 EKHYRYTCPVCSKSLW 59 (136)
Q Consensus 44 ~~~~~~~CP~Cr~~~~ 59 (136)
+......||.|+..+.
T Consensus 2 i~~~~k~CP~C~~~Ie 17 (60)
T 1wd2_A 2 IAANTKECPKCHVTIE 17 (60)
T ss_dssp CCCCCCCCTTTCCCCS
T ss_pred ccccceECcCCCCeeE
Confidence 3334567999987774
No 300
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=20.08 E-value=31 Score=17.79 Aligned_cols=15 Identities=27% Similarity=0.589 Sum_probs=11.5
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|+.|.+.|....
T Consensus 8 p~~C~~CgK~F~~~s 22 (36)
T 1fv5_A 8 RFMCLPCGIAFSSPS 22 (36)
T ss_dssp CCEETTTTEECSCHH
T ss_pred CeECCCCCCccCCHh
Confidence 477999999986544
No 301
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.08 E-value=39 Score=17.04 Aligned_cols=15 Identities=27% Similarity=0.589 Sum_probs=11.6
Q ss_pred CCCCCCcccccchhh
Q 032682 48 RYTCPVCSKSLWDMS 62 (136)
Q Consensus 48 ~~~CP~Cr~~~~~~~ 62 (136)
.+.|++|.+.|....
T Consensus 12 ~~~C~~C~k~f~~~~ 26 (46)
T 2eme_A 12 PYVCDYCGKAFGLSA 26 (46)
T ss_dssp SEECSSSCCEESSHH
T ss_pred CeECCCCChhhCCHH
Confidence 467999999986544
Done!