BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032696
MARNGERVGEISQPPPQPQPPPPPARASSGGRLRNRADPLLVVCRCYSVLTSLTALLCLA
VNVLSAIRSFKNGSDIFDGIFRCYAVVIAFFVALAETEWQFVLKFTKVLEYWVARGMLQI
LYVLYYRLILFYFVS

High Scoring Gene Products

Symbol, full name Information P value
AT4G33625 protein from Arabidopsis thaliana 8.5e-33

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032696
        (135 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1005716273 - symbol:AT4G33625 "AT4G33625" spec...   358  8.5e-33   1


>TAIR|locus:1005716273 [details] [associations]
            symbol:AT4G33625 "AT4G33625" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005773 "vacuole" evidence=IDA] [GO:0005774
            "vacuolar membrane" evidence=IDA] GO:GO:0005774 EMBL:CP002687
            GenomeReviews:CT486007_GR InterPro:IPR013714 Pfam:PF08507
            EMBL:BT025762 EMBL:AK118197 IPI:IPI00521335 RefSeq:NP_849487.1
            UniGene:At.46078 PRIDE:Q8GXK1 EnsemblPlants:AT4G33625.1
            GeneID:829503 KEGG:ath:AT4G33625 TAIR:At4g33625
            HOGENOM:HOG000242107 InParanoid:Q8GXK1 OMA:SGILCIG PhylomeDB:Q8GXK1
            ProtClustDB:CLSN2918260 Genevestigator:Q8GXK1 Uniprot:Q8GXK1
        Length = 200

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 69/106 (65%), Positives = 83/106 (78%)

Query:    25 ARASSGG---RLRNRADPLLVVCRCYSVLTSLTALLCLAVNVLSAIRSFKNGSDIFDGIF 81
             A  SSG    +L NRADP LVVCRC+S++TSL A+LC+ VNVL+A+RSF++  D+FDGIF
Sbjct:    12 AGPSSGSAKLKLGNRADPFLVVCRCFSLVTSLIAILCVVVNVLAAVRSFRDSHDLFDGIF 71

Query:    82 RCYAVVIAFFVALAETEWQFVLKFTKVLEYWVARGMLQILYVLYYR 127
             RCYAVVIA FV L ETEW F+LKF+KVLEYW  RGMLQI   +  R
Sbjct:    72 RCYAVVIACFVVLVETEWGFILKFSKVLEYWAGRGMLQIFVAVMTR 117


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.333   0.143   0.437    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      135       123   0.00091  102 3  11 21  0.37    30
                                                     29  0.50    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  567 (60 KB)
  Total size of DFA:  125 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.56u 0.18s 10.74t   Elapsed:  00:00:00
  Total cpu time:  10.56u 0.18s 10.74t   Elapsed:  00:00:00
  Start:  Thu May  9 22:19:57 2013   End:  Thu May  9 22:19:57 2013

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