BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032697
(135 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3OZZ|B Chain B, Structure Of A Cytochrome B5 Core-Swap Mutant
Length = 82
Score = 103 bits (258), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 57/75 (76%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K W+II+ KVYD+T+FL +HPGG+EVLL G DAT+ FEDVGHS
Sbjct: 3 KYYTLEEIQKHNNAKSTWMIIHYKVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHS 62
Query: 67 PSAREMMDQYYVGEI 81
P AREM+ + +GE+
Sbjct: 63 PDAREMLKTFIIGEL 77
>pdb|3NER|A Chain A, Structure Of Human Type B Cytochrome B5
pdb|3NER|B Chain B, Structure Of Human Type B Cytochrome B5
Length = 92
Score = 103 bits (258), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 61/78 (78%)
Query: 9 FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPS 68
+ L EV+ N++K+ WL+I+G+VYDVT+FL +HPGG+EVLL G DA++ FEDVGHS
Sbjct: 12 YRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSD 71
Query: 69 AREMMDQYYVGEIDVSTI 86
AREM+ QYY+G+I S +
Sbjct: 72 AREMLKQYYIGDIHPSDL 89
>pdb|1B5M|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 84
Score = 103 bits (257), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 58/73 (79%)
Query: 9 FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPS 68
+ L EV+ N ++ W++I+G+VYD+T+FL +HPGG+EVLL G DAT+ FEDVGHSP
Sbjct: 5 YRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPD 64
Query: 69 AREMMDQYYVGEI 81
AREM+ QYY+G++
Sbjct: 65 AREMLKQYYIGDV 77
>pdb|3MUS|A Chain A, 2a Resolution Structure Of Rat Type B Cytochrome B5
pdb|3MUS|B Chain B, 2a Resolution Structure Of Rat Type B Cytochrome B5
Length = 87
Score = 103 bits (256), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 58/73 (79%)
Query: 9 FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPS 68
+ L EV+ N ++ W++I+G+VYD+T+FL +HPGG+EVLL G DAT+ FEDVGHSP
Sbjct: 7 YRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPD 66
Query: 69 AREMMDQYYVGEI 81
AREM+ QYY+G++
Sbjct: 67 AREMLKQYYIGDV 79
>pdb|1EUE|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1EUE|B Chain B, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 86
Score = 102 bits (253), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 58/73 (79%)
Query: 9 FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPS 68
+ L EV+ N ++ W++I+G+VYD+T+FL +HPGG+E+LL G DAT+ FED+GHSP
Sbjct: 7 YRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEILLEQAGADATESFEDIGHSPD 66
Query: 69 AREMMDQYYVGEI 81
AREM+ QYY+G++
Sbjct: 67 AREMLKQYYIGDV 79
>pdb|2IBJ|A Chain A, Structure Of House Fly Cytochrome B5
Length = 88
Score = 102 bits (253), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 56/81 (69%)
Query: 1 MGGGDGKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDF 60
M D K FT AEV+ +N W II+ VYDVT FL +HPGG+EVL+ GKDAT+ F
Sbjct: 1 MSSEDVKYFTRAEVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHF 60
Query: 61 EDVGHSPSAREMMDQYYVGEI 81
EDVGHS AREMM QY VGE+
Sbjct: 61 EDVGHSSDAREMMKQYKVGEL 81
>pdb|1AWP|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1AWP|B Chain B, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 92
Score = 100 bits (249), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 58/73 (79%)
Query: 9 FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPS 68
+ L EV+ N ++ W++I+G+VYD+T+FL +HPGG+E+LL G DAT+ FED+GHSP
Sbjct: 12 YRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEELLLEQAGADATESFEDLGHSPD 71
Query: 69 AREMMDQYYVGEI 81
AREM+ QYY+G++
Sbjct: 72 AREMLKQYYIGDV 84
>pdb|1ICC|A Chain A, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1ICC|B Chain B, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1ICC|C Chain C, Rat Outer Mitochondrial Membrane Cytochrome B5
pdb|1ICC|D Chain D, Rat Outer Mitochondrial Membrane Cytochrome B5
Length = 87
Score = 100 bits (248), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 57/73 (78%)
Query: 9 FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPS 68
+ L EV+ N ++ W++I+G+VYD+T+FL +HPGG+EVL G DAT+ FEDVGHSP
Sbjct: 7 YRLEEVAKRNTSEETWMVIHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDVGHSPD 66
Query: 69 AREMMDQYYVGEI 81
AREM+ QYY+G++
Sbjct: 67 AREMLKQYYIGDV 79
>pdb|2I89|A Chain A, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
pdb|2I89|B Chain B, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
pdb|2I89|C Chain C, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
pdb|2I89|D Chain D, Structure Of Septuple Mutant Of Rat Outer Mitochondrial
Membrane Cytochrome B5
Length = 93
Score = 100 bits (248), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 56/73 (76%)
Query: 9 FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPS 68
+ L EV+ HN + W++++G+VYD+T+FL +HPGG+EVL G DAT+ FEDVGHSP
Sbjct: 13 YRLEEVAKHNTSESTWMVLHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDVGHSPD 72
Query: 69 AREMMDQYYVGEI 81
AREM QYY+G++
Sbjct: 73 AREMSKQYYIGDV 85
>pdb|1CYO|A Chain A, Bovine Cytochrome B(5)
Length = 93
Score = 99.8 bits (247), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K WLI++ KVYD+TKFLE+HPGG+EVL G DAT++FEDVGHS
Sbjct: 5 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHS 64
Query: 67 PSAREMMDQYYVGEI---DVSTIPKKKE 91
ARE+ + +GE+ D S I K E
Sbjct: 65 TDARELSKTFIIGELHPDDRSKITKPSE 92
>pdb|1HKO|A Chain A, Nmr Structure Of Bovine Cytochrome B5
Length = 104
Score = 99.4 bits (246), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K WLI++ KVYD+TKFLE+HPGG+EVL G DAT++FEDVGHS
Sbjct: 9 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHS 68
Query: 67 PSAREMMDQYYVGEI---DVSTIPKKKE 91
ARE+ + +GE+ D S I K E
Sbjct: 69 TDARELSKTFIIGELHPDDRSKITKPSE 96
>pdb|2I96|A Chain A, Solution Structure Of The Oxidized Microsomal Human
Cytochrome B5
Length = 108
Score = 99.4 bits (246), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HN+ K WLI++ KVYD+TKFLE+HPGG+EVL G DAT++FEDVGHS
Sbjct: 10 KYYTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHS 69
Query: 67 PSAREMMDQYYVGEIDVSTIPK 88
AREM + +GE+ PK
Sbjct: 70 TDAREMSKTFIIGELHPDDRPK 91
>pdb|1LJ0|A Chain A, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5.
pdb|1LJ0|B Chain B, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5.
pdb|1LJ0|C Chain C, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5.
pdb|1LJ0|D Chain D, Structure Of Quintuple Mutant Of The Rat Outer
Mitocondrial Cytochrome B5
Length = 92
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 56/73 (76%)
Query: 9 FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPS 68
+ L EV+ N ++ W++++G+VYD+T+FL +HPGG+EVL G DAT+ FEDVGHSP
Sbjct: 12 YRLEEVAKRNTSEETWMVLHGRVYDLTRFLSEHPGGEEVLREQAGADATESFEDVGHSPD 71
Query: 69 AREMMDQYYVGEI 81
AREM QYY+G++
Sbjct: 72 AREMSKQYYIGDV 84
>pdb|1EHB|A Chain A, Crystal Structure Of Recombinant Trypsin-Solubilized
Fragment Of Cytochrome B5
pdb|1NX7|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5
Length = 82
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 56/75 (74%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K WLI++ KVYD+TKFLE+HPGG+EVL G DAT++FEDVGHS
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHS 62
Query: 67 PSAREMMDQYYVGEI 81
ARE+ + +GE+
Sbjct: 63 TDARELSKTFIIGEL 77
>pdb|2M33|A Chain A, Solution Nmr Structure Of Full-length Oxidized
Microsomal Rabbit Cytochrome B5
Length = 104
Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 57/77 (74%)
Query: 5 DGKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVG 64
D K +TL E+ HN+ K WLI++ KVYD+TKFLE+HPGG+EVL G DAT++FEDVG
Sbjct: 8 DVKYYTLEEIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVG 67
Query: 65 HSPSAREMMDQYYVGEI 81
HS ARE+ + +GE+
Sbjct: 68 HSTDARELSKTFIIGEL 84
>pdb|1DO9|A Chain A, Solution Structure Of Oxidized Microsomal Rabbit
Cytochrome B5. Factors Determining The Heterogeneous
Binding Of The Heme
Length = 94
Score = 97.1 bits (240), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 57/77 (74%)
Query: 5 DGKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVG 64
D K +TL E+ HN+ K WLI++ KVYD+TKFLE+HPGG+EVL G DAT++FEDVG
Sbjct: 3 DVKYYTLEEIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVG 62
Query: 65 HSPSAREMMDQYYVGEI 81
HS ARE+ + +GE+
Sbjct: 63 HSTDARELSKTFIIGEL 79
>pdb|1U9U|A Chain A, Crystal Structure Of F58y Mutant Of Cytochrome B5
Length = 82
Score = 96.7 bits (239), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 56/75 (74%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K WLI++ KVYD+TKFLE+HPGG+EVL G DAT+++EDVGHS
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENYEDVGHS 62
Query: 67 PSAREMMDQYYVGEI 81
ARE+ + +GE+
Sbjct: 63 TDARELSKTFIIGEL 77
>pdb|1M20|A Chain A, Crystal Structure Of F35y Mutant Of Trypsin-Solubilized
Fragment Of Cytochrome B5
Length = 82
Score = 96.7 bits (239), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 56/75 (74%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K WLI++ KVYD+TK+LE+HPGG+EVL G DAT++FEDVGHS
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKYLEEHPGGEEVLREQAGGDATENFEDVGHS 62
Query: 67 PSAREMMDQYYVGEI 81
ARE+ + +GE+
Sbjct: 63 TDARELSKTFIIGEL 77
>pdb|1BLV|A Chain A, Solution Structure Of Oxidized Rat Microsomal Cytochrome
B5 In The Presence Of 2 M Guanidinium Chloride:
Monitoring The Early Steps In Protein Unfolding
pdb|1AW3|A Chain A, The Solution Nmr Structure Of Oxidized Rat Microsomal
Cytochrome B5, Minimized Average Structure
pdb|1AXX|A Chain A, The Solution Structure Of Oxidized Rat Microsomal
Cytochrome B5, Nmr, 19 Structures
pdb|1B5A|A Chain A, Rat Ferrocytochrome B5 A Conformation, Nmr, 1 Structure
pdb|1B5B|A Chain A, Rat Ferrocytochrome B5 B Conformation, Nmr, 1 Structure
Length = 94
Score = 96.3 bits (238), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Query: 5 DGKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVG 64
D K +TL E+ H + K W+I++ KVYD+TKFLE+HPGG+EVL G DAT++FEDVG
Sbjct: 3 DVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVG 62
Query: 65 HSPSAREMMDQYYVGEI---DVSTIPKKKE 91
HS ARE+ Y +GE+ D S I K E
Sbjct: 63 HSTDARELSKTYIIGELHPDDRSKIAKPSE 92
>pdb|1BFX|A Chain A, The Solution Nmr Structure Of The B Form Of Oxidized Rat
Microsomal Cytochrome B5, Minimized Average Structure
Length = 99
Score = 96.3 bits (238), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Query: 5 DGKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVG 64
D K +TL E+ H + K W+I++ KVYD+TKFLE+HPGG+EVL G DAT++FEDVG
Sbjct: 8 DVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVG 67
Query: 65 HSPSAREMMDQYYVGEI---DVSTIPKKKE 91
HS ARE+ Y +GE+ D S I K E
Sbjct: 68 HSTDARELSKTYIIGELHPDDRSKIAKPSE 97
>pdb|1I87|A Chain A, Solution Structure Of The Water-Soluble Fragment Of Rat
Hepatic Apocytochrome B5
pdb|1I8C|A Chain A, Solution Structure Of The Water-Soluble Fragment Of Rat
Hepatic Apocytochrome B5
pdb|1IET|A Chain A, Apocytochrome B5, Ph 6.2, 298 K, Nmr, Minimized Average
Structure
pdb|1IEU|A Chain A, Apocytochrome B5, Ph 6.2, 298 K, Nmr, 10 Structures
Length = 98
Score = 96.3 bits (238), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Query: 5 DGKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVG 64
D K +TL E+ H + K W+I++ KVYD+TKFLE+HPGG+EVL G DAT++FEDVG
Sbjct: 7 DVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVG 66
Query: 65 HSPSAREMMDQYYVGEI---DVSTIPKKKE 91
HS ARE+ Y +GE+ D S I K E
Sbjct: 67 HSTDARELSKTYIIGELHPDDRSKIAKPSE 96
>pdb|1U9M|A Chain A, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|B Chain B, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|C Chain C, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|D Chain D, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|E Chain E, Crystal Structure Of F58w Mutant Of Cytochrome B5
pdb|1U9M|F Chain F, Crystal Structure Of F58w Mutant Of Cytochrome B5
Length = 82
Score = 95.9 bits (237), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 56/75 (74%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K WLI++ KVYD+TKFLE+HPGG+EVL G DAT+++EDVGHS
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENWEDVGHS 62
Query: 67 PSAREMMDQYYVGEI 81
ARE+ + +GE+
Sbjct: 63 TDARELSKTFIIGEL 77
>pdb|1AQA|A Chain A, Solution Structure Of Reduced Microsomal Rat Cytochrome
B5, Nmr, Minimized Average Structure
pdb|1MNY|A Chain A, Dimethyl Propionate Ester Heme-Containing Cytochrome B5
pdb|2AXX|A Chain A, The Solution Structure Of Oxidized Rat Microsomal
Cytochrome B5, Nmr, 21 Structures
Length = 94
Score = 95.9 bits (237), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Query: 5 DGKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVG 64
D K +TL E+ H + K W+I++ KVYD+TKFLE+HPGG+EVL G DAT++FEDVG
Sbjct: 3 DVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVG 62
Query: 65 HSPSAREMMDQYYVGEI---DVSTIPKKKE 91
HS ARE+ Y +GE+ D S I K E
Sbjct: 63 HSTDARELSKTYIIGELHPDDRSKIAKPSE 92
>pdb|1LR6|A Chain A, Crystal Structure Of V45y Mutant Of Cytochrome B5
Length = 82
Score = 95.9 bits (237), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 55/75 (73%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K WLI++ KVYD+TKFLE+HPGG+E L G DAT++FEDVGHS
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEYLREQAGGDATENFEDVGHS 62
Query: 67 PSAREMMDQYYVGEI 81
ARE+ + +GE+
Sbjct: 63 TDARELSKTFIIGEL 77
>pdb|1LQX|A Chain A, Crystal Structure Of V45e Mutant Of Cytochrome B5
Length = 82
Score = 95.5 bits (236), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 55/75 (73%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K WLI++ KVYD+TKFLE+HPGG+E L G DAT++FEDVGHS
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEELREQAGGDATENFEDVGHS 62
Query: 67 PSAREMMDQYYVGEI 81
ARE+ + +GE+
Sbjct: 63 TDARELSKTFIIGEL 77
>pdb|1SH4|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant V45h
Length = 82
Score = 95.1 bits (235), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 55/75 (73%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K WLI++ KVYD+TKFLE+HPGG+E L G DAT++FEDVGHS
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEHLREQAGGDATENFEDVGHS 62
Query: 67 PSAREMMDQYYVGEI 81
ARE+ + +GE+
Sbjct: 63 TDARELSKTFIIGEL 77
>pdb|1ES1|A Chain A, Crystal Structure Of Val61his Mutant Of
Trypsin-Solubilized Fragment Of Cytochrome B5
Length = 82
Score = 95.1 bits (235), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 55/75 (73%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K WLI++ KVYD+TKFLE+HPGG+EVL G DAT++FED GHS
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDHGHS 62
Query: 67 PSAREMMDQYYVGEI 81
ARE+ + +GE+
Sbjct: 63 TDARELSKTFIIGEL 77
>pdb|1J0Q|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant V61h
Length = 82
Score = 95.1 bits (235), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 55/75 (73%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K WLI++ KVYD+TKFLE+HPGG+EVL G DAT++FED GHS
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDHGHS 62
Query: 67 PSAREMMDQYYVGEI 81
ARE+ + +GE+
Sbjct: 63 TDARELSKTFIIGEL 77
>pdb|1I5U|A Chain A, Solution Structure Of Cytochrome B5 Triple Mutant
(E48aE56AD60A)
Length = 82
Score = 94.7 bits (234), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 55/75 (73%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K WLI++ KVYD+TKFLE+HPGG+EVL + G DAT +FE VGHS
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLRAQAGGDATANFEAVGHS 62
Query: 67 PSAREMMDQYYVGEI 81
ARE+ + +GE+
Sbjct: 63 TDARELSKTFIIGEL 77
>pdb|1IB7|A Chain A, Solution Structure Of F35y Mutant Of Rat Ferro
Cytochrome B5, A Conformation, Ensemble Of 20
Structures
Length = 94
Score = 94.7 bits (234), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Query: 5 DGKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVG 64
D K +TL E+ H + K W+I++ KVYD+TK+LE+HPGG+EVL G DAT++FEDVG
Sbjct: 3 DVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKYLEEHPGGEEVLREQAGGDATENFEDVG 62
Query: 65 HSPSAREMMDQYYVGEI---DVSTIPKKKE 91
HS ARE+ Y +GE+ D S I K E
Sbjct: 63 HSTDARELSKTYIIGELHPDDRSKIAKPSE 92
>pdb|1M59|A Chain A, Crystal Structure Of P40v Mutant Of Trypsin-Solubilized
Fragment Of Cytochrome B5
Length = 82
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 55/75 (73%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K WLI++ KVYD+TKFLE+H GG+EVL G DAT++FEDVGHS
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHVGGEEVLREQAGGDATENFEDVGHS 62
Query: 67 PSAREMMDQYYVGEI 81
ARE+ + +GE+
Sbjct: 63 TDARELSKTFIIGEL 77
>pdb|1M2I|A Chain A, Crystal Structure Of E44aE56A MUTANT OF CYTOCHROME B5
Length = 82
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 54/75 (72%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K WLI++ KVYD+TKFLE+HPGG+ VL G DAT +FEDVGHS
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEAVLREQAGGDATANFEDVGHS 62
Query: 67 PSAREMMDQYYVGEI 81
ARE+ + +GE+
Sbjct: 63 TDARELSKTFIIGEL 77
>pdb|1JEX|A Chain A, Solution Structure Of A67v Mutant Of Rat Ferro
Cytochrome B5
Length = 94
Score = 94.0 bits (232), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 5 DGKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVG 64
D K +TL E+ H + K W+I++ KVYD+TKFLE+HPGG+EVL G DAT++FEDVG
Sbjct: 3 DVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVG 62
Query: 65 HSPSAREMMDQYYVGEI---DVSTIPKKKE 91
HS RE+ Y +GE+ D S I K E
Sbjct: 63 HSTDVRELSKTYIIGELHPDDRSKIAKPSE 92
>pdb|1M2M|A Chain A, Crystal Structure Of E44aE48AE56AD60A MUTANT OF
Cytochrome B5
Length = 82
Score = 92.8 bits (229), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 54/75 (72%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K WLI++ KVYD+TKFLE+HPGG+ VL + G DAT +FE VGHS
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEAVLRAQAGGDATANFEAVGHS 62
Query: 67 PSAREMMDQYYVGEI 81
ARE+ + +GE+
Sbjct: 63 TDARELSKTFIIGEL 77
>pdb|1F03|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant (E44a, E48a, E56a, D60a) And Its
Interaction With Cytochrome C
pdb|1F04|A Chain A, Solution Structure Of Oxidized Bovine Microsomal
Cytochrome B5 Mutant (E44a, E48a, E56a, D60a) And Its
Interaction With Cytochrome C
Length = 82
Score = 92.4 bits (228), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 54/75 (72%)
Query: 7 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHS 66
K +TL E+ HNN K WLI++ KVYD+TKFLE+HPGG+ VL + G DAT +FE VGHS
Sbjct: 3 KYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEAVLRAQAGGDATANFEAVGHS 62
Query: 67 PSAREMMDQYYVGEI 81
ARE+ + +GE+
Sbjct: 63 TDARELSKTFIIGEL 77
>pdb|2OZ0|A Chain A, Mechanistic And Structural Studies Of H373q
Flavocytochrome B2: Effects Of Mutating The Active Site
Base
pdb|2OZ0|B Chain B, Mechanistic And Structural Studies Of H373q
Flavocytochrome B2: Effects Of Mutating The Active Site
Base
Length = 511
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 12 AEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSARE 71
AEV+ HN DCW++ING VYD+T+FL +HPGG +V+ GKD T FE + H+P+
Sbjct: 14 AEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL-HAPN--- 69
Query: 72 MMDQYYVGEIDVSTIPKKKEYTPPK--QPHYNQDKTSEFIIR---LLQFLVPL 119
++D+Y E + + + PP+ P Y +T E I R L L PL
Sbjct: 70 VIDKYIAPEKKLGPL---QGSMPPELVCPPYAPGETKEDIARKEQLKSLLPPL 119
>pdb|1SZF|A Chain A, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate Bound
pdb|1SZF|B Chain B, A198g:l230a Mutant Flavocytochrome B2 With Pyruvate Bound
pdb|1SZG|A Chain A, A198g:l230a Flavocytochrome B2 With Sulfite Bound
pdb|1SZG|B Chain B, A198g:l230a Flavocytochrome B2 With Sulfite Bound
Length = 511
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 12 AEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSARE 71
AEV+ HN DCW++ING VYD+T+FL +HPGG +V+ GKD T FE + H+P+
Sbjct: 14 AEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL-HAPN--- 69
Query: 72 MMDQYYVGEIDVSTIPKKKEYTPPK--QPHYNQDKTSEFIIR---LLQFLVPL 119
++D+Y E + + + PP+ P Y +T E I R L L PL
Sbjct: 70 VIDKYIAPEKKLGPL---QGSMPPELVCPPYAPGETKEDIARKEQLKSLLPPL 119
>pdb|1LDC|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
pdb|1LDC|B Chain B, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
pdb|1LCO|A Chain A, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
pdb|1LCO|B Chain B, X-Ray Structure Of Two Complexes Of The Y143f
Flavocytochrome B2 Mutant Crystallized In The Presence
Of Lactate Or Phenyl-Lactate
Length = 511
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 12 AEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSARE 71
AEV+ HN DCW++ING VYD+T+FL +HPGG +V+ GKD T FE + H+P+
Sbjct: 14 AEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL-HAPN--- 69
Query: 72 MMDQYYVGEIDVSTIPKKKEYTPPK--QPHYNQDKTSEFIIR---LLQFLVPL 119
++D+Y E + + + PP+ P Y +T E I R L L PL
Sbjct: 70 VIDKYIAPEKKLGPL---QGSMPPELVCPPYAPGETKEDIARKEQLKSLLPPL 119
>pdb|1FCB|A Chain A, Molecular Structure Of Flavocytochrome B2 At 2.4 Angstroms
Resolution
pdb|1FCB|B Chain B, Molecular Structure Of Flavocytochrome B2 At 2.4 Angstroms
Resolution
pdb|1KBI|A Chain A, Crystallographic Study Of The Recombinant Flavin-Binding
Domain Of Baker's Yeast Flavocytochrome B2: Comparison
With The Intact Wild- Type Enzyme
pdb|1KBI|B Chain B, Crystallographic Study Of The Recombinant Flavin-Binding
Domain Of Baker's Yeast Flavocytochrome B2: Comparison
With The Intact Wild- Type Enzyme
Length = 511
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 12 AEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSARE 71
AEV+ HN DCW++ING VYD+T+FL +HPGG +V+ GKD T FE + H+P+
Sbjct: 14 AEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL-HAPN--- 69
Query: 72 MMDQYYVGEIDVSTIPKKKEYTPPK--QPHYNQDKTSEFIIR---LLQFLVPL 119
++D+Y E + + + PP+ P Y +T E I R L L PL
Sbjct: 70 VIDKYIAPEKKLGPL---QGSMPPELVCPPYAPGETKEDIARKEQLKSLLPPL 119
>pdb|1LTD|A Chain A, The 2.6 Angstroms Refined Structure Of The Escherichia
Coli Recombinant Saccharomyces Cerevisiae
Flavocytochrome B2-Sulphite Complex
pdb|1LTD|B Chain B, The 2.6 Angstroms Refined Structure Of The Escherichia
Coli Recombinant Saccharomyces Cerevisiae
Flavocytochrome B2-Sulphite Complex
Length = 506
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 12 AEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSARE 71
AEV+ HN DCW++ING VYD+T+FL +HPGG +V+ GKD T FE + H+P+
Sbjct: 9 AEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL-HAPN--- 64
Query: 72 MMDQYYVGEIDVSTIPKKKEYTPPK--QPHYNQDKTSEFIIR---LLQFLVPL 119
++D+Y E + + + PP+ P Y +T E I R L L PL
Sbjct: 65 VIDKYIAPEKKLGPL---QGSMPPELVCPPYAPGETKEDIARKEQLKSLLPPL 114
>pdb|1SZE|A Chain A, L230a Mutant Flavocytochrome B2 With Benzoylformate
pdb|1SZE|B Chain B, L230a Mutant Flavocytochrome B2 With Benzoylformate
Length = 511
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 12 AEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSARE 71
AEV+ HN DCW++ING VYD+T+FL +HPGG +V+ GKD T FE + H+P+
Sbjct: 14 AEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL-HAPN--- 69
Query: 72 MMDQYYVGEIDVSTIPKKKEYTPPK--QPHYNQDKTSEFIIR---LLQFLVPL 119
++D+Y E + + + PP+ P Y +T E I R L L PL
Sbjct: 70 VIDKYIAPEKKLGPL---QGSMPPELVCPPYAPGETKEDIARKEQLKSLLPPL 119
>pdb|3KS0|A Chain A, Crystal Structure Of The Heme Domain Of Flavocytochrome
B2 In Complex With Fab B2b4
pdb|3KS0|B Chain B, Crystal Structure Of The Heme Domain Of Flavocytochrome
B2 In Complex With Fab B2b4
Length = 95
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 9 FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPS 68
+ AEV+ HN DCW++ING VYD+T+FL +HPGG +V+ GKD T FE + H+P+
Sbjct: 6 ISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL-HAPN 64
Query: 69 AREMMDQYYVGE 80
++D+Y E
Sbjct: 65 ---VIDKYIAPE 73
>pdb|1CXY|A Chain A, Structure And Characterization Of Ectothiorhodospira
Vacuolata Cytochrome B558, A Prokaryotic Homologue Of
Cytochrome B5
Length = 90
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 8 VFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVG--- 64
VFTL +V++H++ DCW+ I+GKVYD+T ++ +HPG ++L G+++T+ +E
Sbjct: 9 VFTLEQVAEHHSPDDCWMAIHGKVYDLTPYVPNHPGPAGMMLVWCGQESTEAWETKSYGE 68
Query: 65 -HSPSAREMMDQYYVGEID 82
HS A ++ +Y +G ++
Sbjct: 69 PHSSLAARLLQRYLIGTLE 87
>pdb|3LF5|A Chain A, Structure Of Human Nadh Cytochrome B5 Oxidoreductase
(Ncb5or) B5 Domain To 1.25a Resolution
pdb|3LF5|B Chain B, Structure Of Human Nadh Cytochrome B5 Oxidoreductase
(Ncb5or) B5 Domain To 1.25a Resolution
Length = 88
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 10 TLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSA 69
T E+ HN DCW+ I G VY+V+ ++E HPGG++ L+ A G D T+ F+ V +
Sbjct: 9 TEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNY 68
Query: 70 REMMDQYYVGEIDV 83
M+ + VG + +
Sbjct: 69 ESMLKECLVGRMAI 82
>pdb|1X3X|A Chain A, Crystal Structure Of Cytochrome B5 From Ascaris Suum
pdb|1X3X|B Chain B, Crystal Structure Of Cytochrome B5 From Ascaris Suum
Length = 82
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 4 GDGKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDV 63
GD K +T EV+ HN D W+I +G+V+D+T F ++HPGG +V+L+ G+DAT + +
Sbjct: 2 GDKK-YTKEEVAKHNTQNDLWIIYDGEVHDMTSFYKEHPGG-KVILNKAGQDATSVLKTL 59
Query: 64 G-HSPSAREMMDQ 75
H +A +M +
Sbjct: 60 APHVKAADVVMKK 72
>pdb|3HC2|A Chain A, Crystal Structure Of Chicken Sulfite Oxidase Mutant Tyr
322 Phe
Length = 466
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 9 FTLAEVSDHNNMKD-CWLIINGKVYDVTKFLEDHPGG-DEVLLSATGKDATDDF---EDV 63
+T EV H + ++ W+ V+DVT F+E HPGG D++LL+A G A + F V
Sbjct: 7 YTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGG--ALEPFWALYAV 64
Query: 64 GHSPSAREMMDQYYVGEIDVSTIPKKKEYT------PPKQP 98
P E++ QY VGE+ P + PP+ P
Sbjct: 65 HGEPHVLELLQQYKVGELSPDEAPAAPDAQDPFAGDPPRHP 105
>pdb|3R18|A Chain A, Chicken Sulfite Oxidase Double Mutant With Altered
Activity And Substrate Affinity
Length = 466
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 9 FTLAEVSDHNNMKD-CWLIINGKVYDVTKFLEDHPGG-DEVLLSATGKDATDDF---EDV 63
+T EV H + ++ W+ V+DVT F+E HPGG D++LL+A G A + F V
Sbjct: 7 YTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGG--ALEPFWALYAV 64
Query: 64 GHSPSAREMMDQYYVGEIDVSTIPKKKEYT------PPKQP 98
P E++ QY VGE+ P + PP+ P
Sbjct: 65 HGEPHVLELLQQYKVGELSPDEAPAAPDAQDPFAGDPPRHP 105
>pdb|1SOX|A Chain A, Sulfite Oxidase From Chicken Liver
pdb|1SOX|B Chain B, Sulfite Oxidase From Chicken Liver
Length = 466
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 9 FTLAEVSDHNNMKD-CWLIINGKVYDVTKFLEDHPGG-DEVLLSATGKDATDDF---EDV 63
+T EV H + ++ W+ V+DVT F+E HPGG D++LL+A G A + F V
Sbjct: 7 YTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGG--ALEPFWALYAV 64
Query: 64 GHSPSAREMMDQYYVGEIDVSTIPKKKEYT------PPKQP 98
P E++ QY VGE+ P + PP+ P
Sbjct: 65 HGEPHVLELLQQYKVGELSPDEAPAAPDAQDPFAGDPPRHP 105
>pdb|3R19|A Chain A, Chicken Sulfite Oxidase Triple Mutant With Altered
Activity And Substrate Affinity
Length = 466
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 9 FTLAEVSDHNNMKD-CWLIINGKVYDVTKFLEDHPGG-DEVLLSATGKDATDDF---EDV 63
+T EV H + ++ W+ V+DVT F+E HPGG D++LL+A G A + F V
Sbjct: 7 YTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGG--ALEPFWALYAV 64
Query: 64 GHSPSAREMMDQYYVGEIDVSTIPKKKEYT------PPKQP 98
P E++ QY VGE+ P + PP+ P
Sbjct: 65 HGEPHVLELLQQYKVGELSPDEAPAAPDAQDPFAGDPPRHP 105
>pdb|3HBG|A Chain A, Structure Of Recombinant Chicken Liver Sulfite Oxidase
Mutant C185s
pdb|3HBP|A Chain A, The Crystal Structure Of C185s Mutant Of Recombinant
Sulfite Oxidase With Bound Substrate, Sulfite, At The
Active Site
Length = 466
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 9 FTLAEVSDHNNMKD-CWLIINGKVYDVTKFLEDHPGG-DEVLLSATGKDATDDF---EDV 63
+T EV H + ++ W+ V+DVT F+E HPGG D++LL+A G A + F V
Sbjct: 7 YTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGG--ALEPFWALYAV 64
Query: 64 GHSPSAREMMDQYYVGEIDVSTIPKKKEYT------PPKQP 98
P E++ QY VGE+ P + PP+ P
Sbjct: 65 HGEPHVLELLQQYKVGELSPDEAPAAPDAQDPFAGDPPRHP 105
>pdb|3HBQ|A Chain A, Structure Of Recombinant Chicken Liver Sulfite Oxidase
Mutant Cys 185 Ala
Length = 466
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 9 FTLAEVSDHNNMKD-CWLIINGKVYDVTKFLEDHPGG-DEVLLSATGKDATDDF---EDV 63
+T EV H + ++ W+ V+DVT F+E HPGG D++LL+A G A + F V
Sbjct: 7 YTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGG--ALEPFWALYAV 64
Query: 64 GHSPSAREMMDQYYVGEIDVSTIPKKKEYT------PPKQP 98
P E++ QY VGE+ P + PP+ P
Sbjct: 65 HGEPHVLELLQQYKVGELSPDEAPAAPDAQDPFAGDPPRHP 105
>pdb|1MJ4|A Chain A, Crystal Structure Analysis Of The Cytochrome B5 Domain
Of Human Sulfite Oxidase
Length = 82
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 8 VFTLAEVSDHNNMKD-CWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFE--DVG 64
++T EVS H + + W+ + +V+DVT+F++ HPGG L+ A G + V
Sbjct: 6 IYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVH 65
Query: 65 HSPSAREMMDQYYVGEI 81
+ RE++ QY +GE+
Sbjct: 66 NQSHVRELLAQYKIGEL 82
>pdb|2KEO|A Chain A, Solution Nmr Structure Of Human Protein Hs00059,
Cytochrome-B5-Like Domain Of The Herc2 E3 Ligase.
Northeast Structural Genomics Consortium (Nesg) Target
Ht98a
Length = 112
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 11 LAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAR 70
+A++ +HNN W +I+GKVYD+ F + +L G+D E R
Sbjct: 28 IADLENHNNDGGFWTVIDGKVYDIKDFQTQSLTENSILAQFAGEDPVVALEAALQFEDTR 87
Query: 71 EMMDQYYVGE 80
E M + VG+
Sbjct: 88 ESMHAFCVGQ 97
>pdb|1VF5|D Chain D, Crystal Structure Of Cytochrome B6f Complex From
M.Laminosus
pdb|1VF5|Q Chain Q, Crystal Structure Of Cytochrome B6f Complex From
M.Laminosus
pdb|2D2C|D Chain D, Crystal Structure Of Cytochrome B6f Complex With Dbmib
From M. Laminosus
pdb|2D2C|Q Chain Q, Crystal Structure Of Cytochrome B6f Complex With Dbmib
From M. Laminosus
Length = 179
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 29 GKVYDVTKFLEDHPGGDEVLLSATGKDAT 57
G V+KFLE H GD VL+ D T
Sbjct: 61 GNNVKVSKFLESHNAGDRVLVQGLKGDPT 89
>pdb|2E74|D Chain D, Crystal Structure Of The Cytochrome B6f Complex From
M.Laminosus
pdb|2E75|D Chain D, Crystal Structure Of The Cytochrome B6f Complex With
2-nonyl-4- Hydroxyquinoline N-oxide (nqno) From
M.laminosus
pdb|2E76|D Chain D, Crystal Structure Of The Cytochrome B6f Complex With
Tridecyl- Stigmatellin (Tds) From M.Laminosus
pdb|4H0L|D Chain D, Cytochrome B6f Complex Crystal Structure From
Mastigocladus Laminosus With N-side Inhibitor Nqno
pdb|4H13|D Chain D, Crystal Structure Of The Cytochrome B6f Complex From
Mastigocladus Laminosus With Tds
Length = 179
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 29 GKVYDVTKFLEDHPGGDEVLLSATGKDAT 57
G V+KFLE H GD VL+ D T
Sbjct: 61 GNNVKVSKFLESHNAGDRVLVQGLKGDPT 89
>pdb|1KJW|A Chain A, Sh3-Guanylate Kinase Module From Psd-95
Length = 295
Score = 25.8 bits (55), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 26/64 (40%)
Query: 9 FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPS 68
F + + D++ KDC + + L GDE A + + +D+G PS
Sbjct: 2 FYIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPS 61
Query: 69 AREM 72
R +
Sbjct: 62 KRRV 65
>pdb|2XKX|A Chain A, Single Particle Analysis Of Psd-95 In Negative Stain
pdb|2XKX|B Chain B, Single Particle Analysis Of Psd-95 In Negative Stain
Length = 721
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 26/64 (40%)
Query: 9 FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPS 68
F + + D++ KDC + + L GDE A + + +D+G PS
Sbjct: 428 FYIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPS 487
Query: 69 AREM 72
R +
Sbjct: 488 KRRV 491
>pdb|1JXM|A Chain A, Crystal Structure Of The Gmp Bound Sh3-Hook-Gk Fragment
Of Psd-95
pdb|1JXO|A Chain A, Crystal Structure Of The Sh3-Hook-Gk Fragment Of Psd-95
pdb|1JXO|B Chain B, Crystal Structure Of The Sh3-Hook-Gk Fragment Of Psd-95
Length = 301
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 26/64 (40%)
Query: 9 FTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPS 68
F + + D++ KDC + + L GDE A + + +D+G PS
Sbjct: 8 FYIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPS 67
Query: 69 AREM 72
R +
Sbjct: 68 KRRV 71
>pdb|1J03|A Chain A, Solution Structure Of A Putative Steroid-Binding Protein
From Arabidopsis
Length = 102
Score = 25.4 bits (54), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 9 FTLAEVSDHNNM---KDCWLIINGKVYDVTKFLEDH-PGGDEVLLSATGKDAT 57
FT ++S +N K ++ I G+V+DVT + GGD + + GKDA+
Sbjct: 5 FTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFA--GKDAS 55
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.138 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,596,787
Number of Sequences: 62578
Number of extensions: 195346
Number of successful extensions: 358
Number of sequences better than 100.0: 65
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 289
Number of HSP's gapped (non-prelim): 65
length of query: 135
length of database: 14,973,337
effective HSP length: 88
effective length of query: 47
effective length of database: 9,466,473
effective search space: 444924231
effective search space used: 444924231
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 46 (22.3 bits)