BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032698
(135 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FKW8|STR18_ARATH Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana GN=STR18
PE=1 SV=1
Length = 136
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 76/98 (77%)
Query: 27 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLK 86
EV++VDV AK LL+SG+ YLDVRT +EF+ GH +AAKI NIPYM NTP+GRVKN +FL+
Sbjct: 13 EVVSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRVKNQEFLE 72
Query: 87 KVRSLCKEEDRLVVGCQSGARSLHATADLLGAVSFRLR 124
+V SL D ++VGCQSGARSL AT +L+ A ++R
Sbjct: 73 QVSSLLNPADDILVGCQSGARSLKATTELVAAGYKKVR 110
>sp|F4IPI4|STR17_ARATH Rhodanese-like domain-containing protein 17 OS=Arabidopsis thaliana
GN=STR17 PE=2 SV=1
Length = 156
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 78/116 (67%), Gaps = 8/116 (6%)
Query: 11 LRGLFLLLLICRS--------SGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDA 62
LR LL ++ S +VIT+DV A+ LL+SGY +LDVRT EEFK+GHVD+
Sbjct: 7 LRSFLLLFIVFNHLPRTTTSMSEPKVITIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDS 66
Query: 63 AKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGA 118
+FN+PY TP+G+ NP+FLK V SLC + D L++GC+SG RSLHAT L+ +
Sbjct: 67 ENVFNVPYWLYTPQGQEINPNFLKHVSSLCNQTDHLILGCKSGVRSLHATKFLVSS 122
>sp|Q8RUD6|STR19_ARATH Rhodanese-like domain-containing protein 19, mitochondrial
OS=Arabidopsis thaliana GN=STR19 PE=2 SV=1
Length = 169
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 27 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLK 86
+V TVDV AK L +G+ YLDVRT EEF + HV+ A NIPYMF T EGRV NPDFL
Sbjct: 40 DVETVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEA--LNIPYMFKTDEGRVINPDFLS 97
Query: 87 KVRSLCKEEDRLVVGCQSGARSLHATADLL 116
+V S+CK+++ L+V C +G R A DLL
Sbjct: 98 QVASVCKKDEHLIVACNAGGRGSRACVDLL 127
>sp|Q39129|STR16_ARATH Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis
thaliana GN=STR16 PE=1 SV=2
Length = 120
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Query: 30 TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 89
+V V A +LL +G+ YLDVRT EEF +GH A N+PYM G KNPDFL++V
Sbjct: 10 SVSVTVAHDLLLAGHRYLDVRTPEEFSQGH--ACGAINVPYMNRGASGMSKNPDFLEQVS 67
Query: 90 SLCKEEDRLVVGCQSGARSLHATADLLGA 118
S + D ++VGCQSG RS+ AT DLL A
Sbjct: 68 SHFGQSDNIIVGCQSGGRSIKATTDLLHA 96
>sp|P27626|DIN1_RAPSA Senescence-associated protein DIN1 OS=Raphanus sativus GN=DIN1 PE=2
SV=1
Length = 183
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 30 TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 89
+V VR A+ L ++GY +LDVRT +EF GH ++ N+PYM+ G VKNP FL++V
Sbjct: 73 SVPVRVARELAQAGYKHLDVRTPDEFSIGH--PSRAINVPYMYRVGSGMVKNPSFLRQVS 130
Query: 90 SLCKEEDRLVVGCQSGARSLHATADLLGA 118
S ++ D +++GC+SG RSL A+ +LL A
Sbjct: 131 SHFRKHDEIIIGCESGERSLMASTELLTA 159
>sp|Q38853|STR15_ARATH Rhodanese-like domain-containing protein 15, chloroplastic
OS=Arabidopsis thaliana GN=STR15 PE=2 SV=1
Length = 182
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Query: 30 TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 89
+V VR A+ L ++GY YLDVRT +EF GH + N+PYM+ G VKNP FL++V
Sbjct: 72 SVPVRVARELAQAGYRYLDVRTPDEFSIGH--PTRAINVPYMYRVGSGMVKNPSFLRQVS 129
Query: 90 SLCKEEDRLVVGCQSGARSLHATADLLGA 118
S ++ D +++GC+SG S A+ DLL A
Sbjct: 130 SHFRKHDEIIIGCESGQMSFMASTDLLTA 158
>sp|O48529|STR9_ARATH Rhodanese-like domain-containing protein 9, chloroplastic
OS=Arabidopsis thaliana GN=STR9 PE=2 SV=1
Length = 234
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 28/116 (24%)
Query: 25 GAEVITVDVRAAKNLL-ESGYGYLDVRTAEEFKEGHVDAAKIFNIPYM------------ 71
AE+ V+ AK L+ E GY +DVR +F+ H+ + +IP
Sbjct: 46 AAELKFVNAEEAKQLIAEEGYSVVDVRDKTQFERAHIKSCS--HIPLFIYNEDNDIGTII 103
Query: 72 ------------FNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADL 115
F P +V NP+FLK VR+ ++ +L++ CQ G RS A + L
Sbjct: 104 KRTVHNNFSGLFFGLPFTKV-NPEFLKSVRNEFSQDSKLLLVCQEGLRSAAAASRL 158
>sp|Q94A65|STR14_ARATH Rhodanese-like domain-containing protein 14, chloroplastic
OS=Arabidopsis thaliana GN=At4g27700 PE=2 SV=1
Length = 224
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 21/107 (19%)
Query: 28 VITVDVRAAKNLL-ESGYGYLDVRTAEEFKEGHV------------------DAAKIFNI 68
V +VDV+ A+ L E+ + LDVR E+K GH D A+
Sbjct: 74 VRSVDVKEAQRLQKENNFVILDVRPEAEYKAGHPPGAINVEMYRLIREWTAWDIARRLGF 133
Query: 69 PYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGARSLHATADL 115
+ F G +NP+F++ V + +E +++V C S A ++ T +L
Sbjct: 134 AF-FGIFSGTEENPEFIQSVEAKLDKEAKIIVAC-SSAGTMKPTQNL 178
>sp|Q10215|RDL_SCHPO Putative thiosulfate sulfurtransferase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC4H3.07c PE=3 SV=2
Length = 142
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 16/83 (19%)
Query: 47 LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVK-----NPDFLKKVRSLCKE--EDRLV 99
+DVR +EFK+G ++ + +N P G+++ + + K K ED +V
Sbjct: 50 IDVREPDEFKQGAIETS--------YNLPVGKIEEAMKLSDEEFSKTYGFSKPVFEDNVV 101
Query: 100 VGCQSGARSLHATADLLGAVSFR 122
V C+SG RS A +D+L + ++
Sbjct: 102 VYCRSGRRSTTA-SDILTKLGYK 123
>sp|A3LQU0|ATG4_PICST Probable cysteine protease ATG4 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=ATG4 PE=3 SV=2
Length = 514
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 48 DVRTAEEFKEGHVDAA-KI--FNIPYMFNTPEGRVKNPDFLKKVRSLCKEED 96
D+ + E FK+ +DAA KI F+ PE R KN +F+ RS K+ED
Sbjct: 377 DLTSYENFKKSCLDAANKIVHFHATERSTVPESRRKNSEFVNINRSDLKDED 428
>sp|P51335|MOEB_PORPU Probable molybdopterin-synthase adenylyltransferase OS=Porphyra
purpurea GN=moeB PE=3 SV=1
Length = 382
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 17/97 (17%)
Query: 19 LICRSSGAEVITVDVRAAKN-LLESGYGY--LDVRTAEEFKEGHVDAAKIFNIPYMFNTP 75
L+ +S V +DV +N L + + Y LDVR+ EE++E H+D A N+P
Sbjct: 264 LLVGNSSYPVQEIDVIELQNELYRNSFKYIILDVRSKEEYEESHLDKA--VNLPI----- 316
Query: 76 EGRVKNPDFLKKVRSLCKEEDRL-VVGCQSGARSLHA 111
D K+ S +D++ + C +RS+ A
Sbjct: 317 ------KDMKKRYYSDLNLQDKISFIYCSVDSRSIFA 347
>sp|Q6MUC7|END4_MYCMS Probable endonuclease 4 OS=Mycoplasma mycoides subsp. mycoides SC
(strain PG1) GN=nfo PE=3 SV=1
Length = 289
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 27 EVITVDVRAAKNLLES--------GYGYL--DVRTAEEFKEGHVDAAKIFNIPYMFNTPE 76
+V+ + + +KN++ S GYGY+ D F + + +KI PY+ TP
Sbjct: 213 KVLCIHLNDSKNMISSHKDRHANIGYGYVGFDTLVNVVFDKDFSNISKILETPYIDKTPP 272
Query: 77 GRVKNPDFLKK 87
+++ D L K
Sbjct: 273 YKIEIEDLLNK 283
>sp|Q9E784|L_BEFVB RNA-directed RNA polymerase L OS=Bovine ephemeral fever virus
(strain BB7721) GN=L PE=3 SV=1
Length = 2144
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 82 PDFLKKVRSLCKEEDRLVVGCQSGARSLHATADLLGAVSFRLRFQFSPTK 131
P+FLK V + ++LV+G ++ R L +S+ LR F T+
Sbjct: 533 PEFLKAVNDYGLDWEKLVIGLKAKERELKEEGRFFSLMSYELRDYFVSTE 582
>sp|P70232|CHL1_MOUSE Neural cell adhesion molecule L1-like protein OS=Mus musculus
GN=Chl1 PE=1 SV=2
Length = 1209
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 69 PYMFNTPEGRVKNPDFLKKVR 89
PY+F TPEG + P FLK ++
Sbjct: 906 PYIFQTPEGVPEQPSFLKVIK 926
>sp|P37700|GUNG_CLOCE Endoglucanase G OS=Clostridium cellulolyticum (strain ATCC 35319 /
DSM 5812 / JCM 6584 / H10) GN=celCCG PE=1 SV=2
Length = 725
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 23 SSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNI-PYMFNT----PEG 77
+S V +D A K L G +DV+ A+ +K+G++DA + + Y+ T P+G
Sbjct: 666 NSDKNVDALDFAALKKYLLGGTSSIDVKAADTYKDGNIDAIDMATLKKYLLGTITQLPQG 725
>sp|B8ZQ59|LACG_STRPJ 6-phospho-beta-galactosidase OS=Streptococcus pneumoniae (strain
ATCC 700669 / Spain 23F-1) GN=lacG PE=3 SV=1
Length = 468
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 35 AAKNLLESGYGYLDVRTAE----EFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKK 87
A + +GYG ++V+ E F E H + F + F+TPE N DFL +
Sbjct: 76 AWSRIFPTGYGQVNVKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEALHSNGDFLNR 132
>sp|O00533|CHL1_HUMAN Neural cell adhesion molecule L1-like protein OS=Homo sapiens
GN=CHL1 PE=1 SV=4
Length = 1208
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 69 PYMFNTPEGRVKNPDFLKKVR 89
PY+F TPEG + P FLK ++
Sbjct: 906 PYIFQTPEGVPEQPTFLKVIK 926
>sp|P55734|YGAP_ECOLI Inner membrane protein YgaP OS=Escherichia coli (strain K12)
GN=ygaP PE=1 SV=1
Length = 174
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 14/91 (15%)
Query: 30 TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 89
T+ A+ L+ G +D+R A+E+ H+ A + P ++ K+R
Sbjct: 5 TISPHDAQELIARGAKLIDIRDADEYLREHIPEADL--------APLSVLEQSGLPAKLR 56
Query: 90 SLCKEEDRLVVGCQSGARSLHATADLLGAVS 120
++++ CQ+G R+ + AD L A++
Sbjct: 57 -----HEQIIFHCQAGKRTSN-NADKLAAIA 81
>sp|P54433|YRKF_BACSU UPF0033 protein YrkF OS=Bacillus subtilis (strain 168) GN=yrkF PE=3
SV=1
Length = 185
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 14/62 (22%)
Query: 47 LDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVVGCQSGA 106
LDVR EE+++ H IP + + P G V+ K+ L E D + + C SG
Sbjct: 108 LDVREIEEYEKAH--------IPGVVHIPLGEVE-----KRANEL-NENDEIYIICHSGR 153
Query: 107 RS 108
RS
Sbjct: 154 RS 155
>sp|Q0I891|COXX_SYNS3 Protoheme IX farnesyltransferase OS=Synechococcus sp. (strain
CC9311) GN=ctaB PE=3 SV=1
Length = 327
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 2 GVSRNWVTFLRGLFLLLLICRSSGAEVITVDVRAAKNLLESGY 44
G+ R + +L G+ LLL++ R SGA + VRA ++L G+
Sbjct: 280 GLFRWSILYLFGVCLLLVMSRMSGAAQFDLQVRAVVDILSGGF 322
>sp|P14325|SYQ_DICDI Probable glutamine--tRNA ligase OS=Dictyostelium discoideum GN=glnS
PE=2 SV=2
Length = 779
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 36 AKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEE 95
A L+ GY Y+ +TA E EG K+ + PY T E +K + +R EE
Sbjct: 343 ANELIRRGYAYVCHQTASEISEGR---EKMTDSPYRNRTVEENLK---LFEDMRLGKFEE 396
Query: 96 DRLVVGCQSGARSLHATADLLGAVSFRLRFQFSP 129
+ ++ + + H + +++R+++ P
Sbjct: 397 GKAILRMKGDMK--HPNPCMRDLIAYRIKYHHHP 428
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,595,641
Number of Sequences: 539616
Number of extensions: 1769257
Number of successful extensions: 5039
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 5016
Number of HSP's gapped (non-prelim): 26
length of query: 135
length of database: 191,569,459
effective HSP length: 100
effective length of query: 35
effective length of database: 137,607,859
effective search space: 4816275065
effective search space used: 4816275065
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)