BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032702
(135 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356517261|ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 145
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/146 (65%), Positives = 109/146 (74%), Gaps = 12/146 (8%)
Query: 1 MALRAAVAAPRGLRRLFSTS------PFSSSLNP-----PQRPQAEPSTNLFVSGLSKRT 49
MA RAAVAAPR LRR F T+ PF S+L P P RP AEP+TNLFVSGLSKRT
Sbjct: 1 MATRAAVAAPRVLRRFFCTNSASSSFPFVSTLPPGATPAPTRPTAEPNTNLFVSGLSKRT 60
Query: 50 TDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVI 109
E LR+ F+ FGEVVHA++V R SGYSKGFGFV+YAT+E A K IEGMDGKFLDGWVI
Sbjct: 61 NTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVI 120
Query: 110 FVEYAKPRQPPTLPSQNNTNFQYGRQ 135
F EYA+PR PP P +N++ QYGRQ
Sbjct: 121 FAEYARPRPPPGQPLNSNSS-QYGRQ 145
>gi|388511713|gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 101/141 (71%), Gaps = 6/141 (4%)
Query: 1 MALRAAVAAPRGLRRLFST------SPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETL 54
MA+RAAVAAPRGLRRLF T SPF+ + P R EPSTNLFVSGL+KRTT E L
Sbjct: 1 MAMRAAVAAPRGLRRLFCTNSTSPSSPFTLTGPPTTRQMGEPSTNLFVSGLNKRTTTEKL 60
Query: 55 RDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
R+ F+ FGEVVHA++V R SGYSKGFGFVKYAT+E A K I+GMDGKFLDGWVIF EYA
Sbjct: 61 REEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATIEEASKGIQGMDGKFLDGWVIFAEYA 120
Query: 115 KPRQPPTLPSQNNTNFQYGRQ 135
K P NN Y RQ
Sbjct: 121 KSSPAPGQQPANNMTNPYARQ 141
>gi|255580168|ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis]
gi|223529509|gb|EEF31464.1| RNA binding protein, putative [Ricinus communis]
Length = 354
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/135 (65%), Positives = 95/135 (70%), Gaps = 12/135 (8%)
Query: 10 PRGLRRLFST-------SPFSSSLN--PPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSA 60
PRGL RLFST S FSS N P R QAEP+TNLFVSGLSKRTT E L+ FS
Sbjct: 15 PRGLLRLFSTTTTPSDLSIFSSQANTAPSAREQAEPNTNLFVSGLSKRTTTEGLKQAFSK 74
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPP 120
FGEVV A++V R SGYSKGFGFV+Y +LE A K IEGMDGKFLDGWVIF EYA+PR P
Sbjct: 75 FGEVVQARVVTDRVSGYSKGFGFVRYGSLEDAEKGIEGMDGKFLDGWVIFAEYARPRPP- 133
Query: 121 TLPSQNNTNFQYGRQ 135
LP NNT YG
Sbjct: 134 -LPG-NNTGSAYGNN 146
>gi|449468518|ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 174
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 94/128 (73%), Gaps = 11/128 (8%)
Query: 15 RLFSTSPFSSSLNPP------QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAK 68
RLFS++ SS + PP QR AEPSTNLFVSGLSKRTT E L + F+ FGEV HA+
Sbjct: 50 RLFSSASTSSFIPPPLPPSAQQREVAEPSTNLFVSGLSKRTTTEKLHEAFAKFGEVAHAR 109
Query: 69 IVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQNNT 128
+V R +GYSKGFGFVKYATLE A K IEGMDGKFLDGWVIF EYA+PR PP +NN
Sbjct: 110 VVTDRVTGYSKGFGFVKYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPP----ENNN 165
Query: 129 NFQ-YGRQ 135
F YGR+
Sbjct: 166 GFAPYGRR 173
>gi|356543191|ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max]
Length = 145
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/146 (63%), Positives = 103/146 (70%), Gaps = 12/146 (8%)
Query: 1 MALRAAVAAPRGLRRLFSTSPFSSSL-----------NPPQRPQAEPSTNLFVSGLSKRT 49
MA RAAVAAPR RR F T+ S S P RP AEP+ NLFVSGLSKRT
Sbjct: 1 MATRAAVAAPRVFRRFFCTNSASPSFPFVPTPPPGATPTPTRPTAEPNPNLFVSGLSKRT 60
Query: 50 TDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVI 109
T E LR+ F+ FGEVVHA++V R SGYSKGFGFV+YAT+E A K IEGMDGKFLDGWVI
Sbjct: 61 TTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEEAAKGIEGMDGKFLDGWVI 120
Query: 110 FVEYAKPRQPPTLPSQNNTNFQYGRQ 135
F EYA+PR PP S NN + QYGRQ
Sbjct: 121 FAEYARPRPPPGQ-SLNNNSPQYGRQ 145
>gi|15239676|ref|NP_200269.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758950|dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana]
gi|18175762|gb|AAL59923.1| unknown protein [Arabidopsis thaliana]
gi|20465513|gb|AAM20239.1| unknown protein [Arabidopsis thaliana]
gi|21553374|gb|AAM62467.1| unknown [Arabidopsis thaliana]
gi|332009129|gb|AED96512.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 156
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/136 (61%), Positives = 94/136 (69%), Gaps = 8/136 (5%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQ-------RPQAEPSTNLFVSGLSKRTTDETL 54
A+ +AP GLRRLF ++ S PQ RPQAEPSTNLFVSGLSKRTT E L
Sbjct: 13 AVTEVASAPVGLRRLFCSNASRFSFLSPQAESQTPARPQAEPSTNLFVSGLSKRTTSEGL 72
Query: 55 RDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
R F+ FGEV AK+V R SGYSKGFGFV+YATLE + K I GMDGKFLDGWVIF EYA
Sbjct: 73 RTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGIAGMDGKFLDGWVIFAEYA 132
Query: 115 KPR-QPPTLPSQNNTN 129
+PR Q + QNN +
Sbjct: 133 RPREQSQSYQPQNNMS 148
>gi|115474735|ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|215767574|dbj|BAG99802.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/125 (60%), Positives = 93/125 (74%)
Query: 3 LRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFG 62
+ AA A G RR+FS S FS P P+A+PS NLF+SGLSKRTT + L++ F+ FG
Sbjct: 1 MAAAATARSGFRRMFSISAFSPPKPPTPPPKADPSPNLFISGLSKRTTTDGLKEAFAKFG 60
Query: 63 EVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTL 122
EV+HA++V R +G+SKGFGFV+YAT+E A K IEGMDGKFLDGWVIF EYA+PR PP
Sbjct: 61 EVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGIEGMDGKFLDGWVIFAEYARPRTPPQQ 120
Query: 123 PSQNN 127
P N+
Sbjct: 121 PEMNS 125
>gi|218200448|gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
Length = 141
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 93/125 (74%)
Query: 3 LRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFG 62
+ AA A G RR+FS S FS P P+A+PS NLF+SGLSKRTT + L++ F+ FG
Sbjct: 1 MAAAATARSGFRRMFSISAFSPPKPPTPPPKADPSPNLFISGLSKRTTTDGLKEAFAKFG 60
Query: 63 EVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTL 122
EV+HA++V R +G+SKGFGF++YAT+E A K IEGMDGKFLDGWVIF EYA+PR PP
Sbjct: 61 EVIHARVVTDRVTGFSKGFGFIRYATVEDAAKGIEGMDGKFLDGWVIFAEYARPRTPPQQ 120
Query: 123 PSQNN 127
P N+
Sbjct: 121 PEMNS 125
>gi|224115158|ref|XP_002316957.1| predicted protein [Populus trichocarpa]
gi|222860022|gb|EEE97569.1| predicted protein [Populus trichocarpa]
Length = 153
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/107 (70%), Positives = 86/107 (80%), Gaps = 1/107 (0%)
Query: 29 PQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYAT 88
P R QAEP+TNLFVSGLSKRTT E L++ FS FGEVV A++V R SGYSKGFGFVKYAT
Sbjct: 46 PAREQAEPNTNLFVSGLSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYAT 105
Query: 89 LEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYGRQ 135
LE A + I+GMDG+FLDGWVIF EYA+PRQPP+ P QNNT +Q
Sbjct: 106 LEDAAEGIKGMDGQFLDGWVIFAEYARPRQPPSEP-QNNTGMGLWKQ 151
>gi|297792921|ref|XP_002864345.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310180|gb|EFH40604.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 154 bits (390), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/137 (61%), Positives = 95/137 (69%), Gaps = 10/137 (7%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQ-------RPQAEPSTNLFVSGLSKRTTDETL 54
A+ +AP GLRRLF ++ S PQ RPQAEPSTNLFVSGLSKRTT E L
Sbjct: 13 AVTEVASAPVGLRRLFCSNASRFSFLSPQAESQTPARPQAEPSTNLFVSGLSKRTTSEGL 72
Query: 55 RDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
R F+ FGEV AK+V R SGYSKGFGFV+YATLE + K I GMDGKFLDGWVIF EYA
Sbjct: 73 RTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGIAGMDGKFLDGWVIFAEYA 132
Query: 115 KPRQ--PPTLPSQNNTN 129
+PR+ P P QNN +
Sbjct: 133 RPREQSQPYQP-QNNMS 148
>gi|388512901|gb|AFK44512.1| unknown [Medicago truncatula]
Length = 144
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/131 (64%), Positives = 93/131 (70%), Gaps = 9/131 (6%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQ--------RPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
PR RLF T+P +SS P R AEPSTNLFVSGLSKRTT ETLR+ F F
Sbjct: 15 PRSFCRLFCTNPIASSPAFPSFSSSPPSARQMAEPSTNLFVSGLSKRTTTETLREAFQKF 74
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPT 121
GEVVHA++V R SGYSKGFGFVKYATLE A K IEGMDGKFL+GWVIF EYA+PR PP
Sbjct: 75 GEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGMDGKFLEGWVIFAEYARPRPPPG 134
Query: 122 LPSQNNTNFQY 132
+ NNT Y
Sbjct: 135 -EAVNNTGRPY 144
>gi|224124176|ref|XP_002319264.1| predicted protein [Populus trichocarpa]
gi|118487492|gb|ABK95573.1| unknown [Populus trichocarpa]
gi|222857640|gb|EEE95187.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/105 (69%), Positives = 84/105 (80%), Gaps = 1/105 (0%)
Query: 29 PQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYAT 88
P R QAEP+TNLFVSGLSKRTT E L++ FS FGEVV AK+V R SGYSKGFGFV+Y T
Sbjct: 45 PAREQAEPNTNLFVSGLSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSGYSKGFGFVRYGT 104
Query: 89 LEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYG 133
LE A + I+GMDG+FLDGWVIF EYA+P+QPP+ P QNN YG
Sbjct: 105 LEDAAEGIKGMDGQFLDGWVIFAEYARPKQPPSQP-QNNMGPGYG 148
>gi|242080503|ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
gi|241941370|gb|EES14515.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
Length = 140
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/123 (65%), Positives = 91/123 (73%)
Query: 5 AAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEV 64
AA A G RR+FS S F+ P RPQA+PS NLFVSGLSKRTT E LRD F+ FGEV
Sbjct: 2 AAAVARSGFRRMFSVSAFAPPKAPAPRPQADPSPNLFVSGLSKRTTTEGLRDAFAKFGEV 61
Query: 65 VHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTLPS 124
VHA++V R SG+SKGFGFV+YAT E A K IEGMDGKFLDGWVIF EYA+PR PP
Sbjct: 62 VHARVVTDRVSGFSKGFGFVRYATTEEATKGIEGMDGKFLDGWVIFAEYARPRAPPEQAE 121
Query: 125 QNN 127
N+
Sbjct: 122 MNS 124
>gi|225461185|ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|147854770|emb|CAN78606.1| hypothetical protein VITISV_024164 [Vitis vinifera]
gi|302143178|emb|CBI20473.3| unnamed protein product [Vitis vinifera]
Length = 135
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 91/128 (71%), Gaps = 5/128 (3%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQRPQA---EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVH 66
PR LRRLFSTS F P EPSTNLFVSGLSKRTT E L + FS FG+VV+
Sbjct: 10 PRSLRRLFSTSTFIPPPITAATPATPPAEPSTNLFVSGLSKRTTSEGLHEAFSKFGQVVN 69
Query: 67 AKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQN 126
A++V R SGYSKGFGFV+Y +LE A + I+GMDGKFLDGWVIF EYA+PR PP+ QN
Sbjct: 70 ARVVTDRVSGYSKGFGFVRYVSLEDAAEGIKGMDGKFLDGWVIFAEYARPRPPPS--PQN 127
Query: 127 NTNFQYGR 134
N YGR
Sbjct: 128 NGAPPYGR 135
>gi|226496497|ref|NP_001150207.1| LOC100283837 [Zea mays]
gi|195621336|gb|ACG32498.1| nucleolin [Zea mays]
gi|195637560|gb|ACG38248.1| nucleolin [Zea mays]
gi|223948323|gb|ACN28245.1| unknown [Zea mays]
gi|413917478|gb|AFW57410.1| nucleolin [Zea mays]
Length = 140
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/123 (63%), Positives = 90/123 (73%)
Query: 5 AAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEV 64
AA A G RR+FS S F+ P RP+A+PS NLFVSGLSKRTT E LR+ F+ FGEV
Sbjct: 2 AAAVARSGFRRMFSVSAFAPPKAPAARPKADPSPNLFVSGLSKRTTSEGLREAFAEFGEV 61
Query: 65 VHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTLPS 124
+HA++V R SG+SKGFGFV+YAT E A K IEG DGKFLDGWVIF EYAKPR PP
Sbjct: 62 LHARVVTDRVSGFSKGFGFVRYATTEEAAKGIEGKDGKFLDGWVIFAEYAKPRPPPEETG 121
Query: 125 QNN 127
N+
Sbjct: 122 MNS 124
>gi|357144628|ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
Length = 153
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 91/131 (69%), Gaps = 13/131 (9%)
Query: 5 AAVAAPRGLR-------------RLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTD 51
AA A GLR RLFS S F+ P P+A+PS NLFVSGLSKRTT
Sbjct: 2 AAAVARSGLRRMFAISDVAATSSRLFSISAFTPPSPPTPPPKADPSPNLFVSGLSKRTTT 61
Query: 52 ETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFV 111
+ LR+ F+ FGEV+HA++V R +G+SKGFGFV+YA++E A K IEGMDGKFLDGWVIF
Sbjct: 62 DGLREAFAKFGEVMHARVVTDRVTGFSKGFGFVRYASVEDASKGIEGMDGKFLDGWVIFA 121
Query: 112 EYAKPRQPPTL 122
EYA+PR PP +
Sbjct: 122 EYARPRPPPQM 132
>gi|326514928|dbj|BAJ99825.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517426|dbj|BAK00080.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 91/131 (69%), Gaps = 13/131 (9%)
Query: 5 AAVAAPRGLRRLFST-------------SPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTD 51
AAVAA GLRR+FS S FS P P+A+PS NLFVSGLSKRTT
Sbjct: 2 AAVAARSGLRRMFSIADFPTPNTRMFSISAFSPPNPPTPPPKADPSPNLFVSGLSKRTTT 61
Query: 52 ETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFV 111
+ LR+ F+ FGEV HA+++ R +G+SKGFGFV+Y T+E A K IEGMDG+FLDGWVIF
Sbjct: 62 DGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDGEFLDGWVIFA 121
Query: 112 EYAKPRQPPTL 122
EYA+PR PP +
Sbjct: 122 EYARPRPPPQM 132
>gi|115472673|ref|NP_001059935.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|28564803|dbj|BAC57733.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113611471|dbj|BAF21849.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|125600644|gb|EAZ40220.1| hypothetical protein OsJ_24665 [Oryza sativa Japonica Group]
gi|215767980|dbj|BAH00209.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 133
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 93/126 (73%), Gaps = 3/126 (2%)
Query: 12 GLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVK 71
G RR+FS S F+ P RP A+P NLFVSGL+KRTT + LR+ FS FG+V+ A+++
Sbjct: 9 GFRRMFSVSGFTPPPPPAARPLADPCNNLFVSGLNKRTTSDGLREAFSKFGQVIEARVIT 68
Query: 72 HRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR--QPPTLPSQNNTN 129
R SGYS+GFGFVKYAT+E AG+ I+GMDGKFLDGWVIF EYAK R Q P P+ +T+
Sbjct: 69 DRISGYSRGFGFVKYATVEEAGEGIKGMDGKFLDGWVIFAEYAKQREAQQPAQPAA-STS 127
Query: 130 FQYGRQ 135
+QY Q
Sbjct: 128 YQYSNQ 133
>gi|125558733|gb|EAZ04269.1| hypothetical protein OsI_26412 [Oryza sativa Indica Group]
Length = 133
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 92/126 (73%), Gaps = 3/126 (2%)
Query: 12 GLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVK 71
G RR+FS S F+ P RP A+P NLFVSGL+KRTT + LR+ FS FG+V+ A+++
Sbjct: 9 GFRRMFSVSGFTPPPPPAARPVADPCNNLFVSGLNKRTTSDGLREAFSKFGQVIEARVIT 68
Query: 72 HRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR--QPPTLPSQNNTN 129
R SGYS+GFGFVKYAT+E AG+ I+GMDGKFLDGWVIF EYAK R Q P P+ +T
Sbjct: 69 DRISGYSRGFGFVKYATVEEAGEGIKGMDGKFLDGWVIFAEYAKQREAQQPAQPAA-STG 127
Query: 130 FQYGRQ 135
+QY Q
Sbjct: 128 YQYSNQ 133
>gi|346469013|gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]
Length = 139
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 89/130 (68%), Gaps = 6/130 (4%)
Query: 3 LRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFG 62
+ AA A G RR+FS S F+ +P A+P+TNLFVSGLSKRTT E LR+ F+ FG
Sbjct: 1 MAAASVARNGFRRMFSISAFAPPPPAVPKPPADPNTNLFVSGLSKRTTTEGLREAFAKFG 60
Query: 63 EVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEY------AKP 116
EVVHA++V R SGYSKGFGFVKYATLE A + I+GMDGKFLDGWVIF EY P
Sbjct: 61 EVVHARVVTDRVSGYSKGFGFVKYATLEDAAEGIKGMDGKFLDGWVIFAEYARPRAPPPP 120
Query: 117 RQPPTLPSQN 126
Q PS N
Sbjct: 121 PQNSDFPSNN 130
>gi|388493798|gb|AFK34965.1| unknown [Medicago truncatula]
Length = 185
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 83/120 (69%), Gaps = 7/120 (5%)
Query: 5 AAVAAPRGLRRLFSTSPFSSSLNPPQR-------PQAEPSTNLFVSGLSKRTTDETLRDT 57
AAVAAPRG R F T P +SS P AEP+ +FV+GL+KRTT ETLR+
Sbjct: 4 AAVAAPRGFCRFFCTKPTASSPTVPLSSGVTSALKTAEPNEIVFVTGLNKRTTSETLREA 63
Query: 58 FSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
F FGEV ++V R SGYSKGFG+V+YAT E A K I+GMDGKFL+GW++F EYA+PR
Sbjct: 64 FKKFGEVKQVRVVADRVSGYSKGFGYVRYATSEDAAKGIQGMDGKFLEGWIVFAEYARPR 123
>gi|242045928|ref|XP_002460835.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
gi|241924212|gb|EER97356.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
Length = 131
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Query: 12 GLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVK 71
G RRLFS S F++ P RP AEP NLFVSGL+KRTT L++ FS FG+V+ A+++
Sbjct: 10 GFRRLFSVSAFAAPPPPAARPAAEPCNNLFVSGLNKRTTSNGLKEAFSKFGQVIEARVIT 69
Query: 72 HRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQ 131
R SGYS+GFGFVKYAT++ AG+AI+GMDGKFLDGWVIF EYAK R+ T PSQ ++
Sbjct: 70 DRISGYSRGFGFVKYATVQEAGEAIKGMDGKFLDGWVIFAEYAKQRE-ATQPSQQGAPYE 128
Query: 132 Y 132
Y
Sbjct: 129 Y 129
>gi|225440312|ref|XP_002263021.1| PREDICTED: glycine-rich RNA-binding protein blt801 [Vitis vinifera]
gi|297740398|emb|CBI30580.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 84/122 (68%), Gaps = 7/122 (5%)
Query: 1 MALRAAVAAPRGLRRLFSTSPFSSSLNPPQ--RPQAEPSTNLFVSGLSKRTTDETLRDTF 58
MA RA + L+R FSTS FSS +P PST LF+SGL+KRTT E L +
Sbjct: 1 MATRAGL-----LKRFFSTSMFSSQTTAAANAKPAPIPSTTLFISGLNKRTTSEKLNEEA 55
Query: 59 SAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
S FGEVVHA++V R SGYSKGFGFVKYAT+ A + I+G+D +FLDGWVIF E+A+ R
Sbjct: 56 SKFGEVVHARVVTDRSSGYSKGFGFVKYATIAQAEQGIKGLDAQFLDGWVIFAEFARSRT 115
Query: 119 PP 120
PP
Sbjct: 116 PP 117
>gi|357122488|ref|XP_003562947.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Brachypodium distachyon]
Length = 138
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 86/122 (70%), Gaps = 2/122 (1%)
Query: 13 LRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKH 72
RR+FS S FS P RP AEP NLFVSGL+KRTT + LR+ FS FG+V A+++
Sbjct: 15 FRRMFSVSAFSPPPPPAARPAAEPCNNLFVSGLNKRTTTDGLREAFSKFGQVTEARVITD 74
Query: 73 RESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQNNT--NF 130
R SGYS+GFGFVKYAT+E AG+ I+GMDGKFLDGWVIF EYAK R+ P T +
Sbjct: 75 RISGYSRGFGFVKYATVEEAGEGIKGMDGKFLDGWVIFAEYAKQREAQQPPQSAGTPSGY 134
Query: 131 QY 132
QY
Sbjct: 135 QY 136
>gi|226500552|ref|NP_001148723.1| ELAV-like protein 4 [Zea mays]
gi|195621654|gb|ACG32657.1| ELAV-like protein 4 [Zea mays]
Length = 127
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Query: 16 LFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRES 75
LFS S F++ P RP A+P NLFVSGL+KRTT E L++ FS FG+V+ A+++ R S
Sbjct: 12 LFSVSAFAAPPPPAARPAADPCNNLFVSGLNKRTTSEGLKEAFSKFGQVIEARVITDRIS 71
Query: 76 GYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQN 126
GYS+GFGFVKYAT++ AG+AIEGMDGKFLDGWVIF EYAK R+ T PSQ
Sbjct: 72 GYSRGFGFVKYATVQEAGEAIEGMDGKFLDGWVIFAEYAKQRE-ATQPSQQ 121
>gi|326527061|dbj|BAK04472.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 139
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 86/123 (69%), Gaps = 3/123 (2%)
Query: 13 LRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKH 72
RR+FS S F+ P RP AEP NLFVSGL+KRTT + LR+ FS FG+V A+++
Sbjct: 15 FRRMFSVSAFAPPPPPTARPAAEPCNNLFVSGLNKRTTSDGLREAFSKFGQVTDARVITD 74
Query: 73 RESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR---QPPTLPSQNNTN 129
R SGYS+GFGFVKYAT+E A + I+GMDGKF DGWVIF EYAK R QPP ++
Sbjct: 75 RISGYSRGFGFVKYATVEEAAEGIKGMDGKFFDGWVIFAEYAKQREAQQPPQSAGTQSSG 134
Query: 130 FQY 132
+QY
Sbjct: 135 YQY 137
>gi|116792076|gb|ABK26221.1| unknown [Picea sitchensis]
Length = 151
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 85/139 (61%), Gaps = 11/139 (7%)
Query: 1 MALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQA---------EPSTNLFVSGLSKRTTD 51
MALR + R L + PF +S +P A +PS LFVSGLSKRTTD
Sbjct: 1 MALRRVFGSTTLGRFLLAKDPFIASRSPALNNSAVRGMSTEPADPSPKLFVSGLSKRTTD 60
Query: 52 ETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFV 111
E LR+ FS FG V+ A++V + +G SKGF FV+YAT E A K EGMDGKFLDGWVIF
Sbjct: 61 EGLREAFSKFGRVLEARVVTDKMNGVSKGFAFVRYATQEEADKGKEGMDGKFLDGWVIFA 120
Query: 112 EYAKPRQPPTL--PSQNNT 128
+YA+PR P T P NT
Sbjct: 121 DYARPRPPRTYDNPEGGNT 139
>gi|215697937|dbj|BAG92098.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 111
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 74/100 (74%)
Query: 3 LRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFG 62
+ AA A G RR+FS S FS P P+A+PS NLF+SGLSKRTT + L++ F+ FG
Sbjct: 1 MAAAATARSGFRRMFSISAFSPPKPPTPPPKADPSPNLFISGLSKRTTTDGLKEAFAKFG 60
Query: 63 EVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGK 102
EV+HA++V R +G+SKGFGFV+YAT+E A K IEGMDGK
Sbjct: 61 EVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGIEGMDGK 100
>gi|224286824|gb|ACN41115.1| unknown [Picea sitchensis]
Length = 149
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 74/104 (71%), Gaps = 2/104 (1%)
Query: 14 RRLFSTSPFSSSLNPPQRPQA--EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVK 71
R L + PF + + P A + +T LF+SGLS++TTDE LR FS FG++V A++V
Sbjct: 18 RLLLAKDPFCAVRSSPIGLGAVRDFTTKLFISGLSRQTTDEGLRAKFSEFGQLVEARVVT 77
Query: 72 HRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAK 115
R SG S+GFGFV+YATLE A K EGMDGKFLDGWVIF ++AK
Sbjct: 78 DRISGRSRGFGFVRYATLEDAAKGKEGMDGKFLDGWVIFADFAK 121
>gi|226509825|ref|NP_001150518.1| ELAV-like protein 4 [Zea mays]
gi|195639828|gb|ACG39382.1| ELAV-like protein 4 [Zea mays]
gi|414590519|tpg|DAA41090.1| TPA: ELAV-like protein 4 [Zea mays]
Length = 129
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 75/97 (77%)
Query: 16 LFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRES 75
LFS S F++ P RP A P NLFVSGL+KRTT E L++ FS FG+V+ A+++ R S
Sbjct: 12 LFSVSAFAAPPPPAARPAANPCNNLFVSGLNKRTTSEGLKEAFSKFGQVIEARVITDRIS 71
Query: 76 GYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVE 112
GYS+GFGFVKYAT++ AG+AI+GMDGKFLD WVIF E
Sbjct: 72 GYSRGFGFVKYATVQEAGEAIKGMDGKFLDSWVIFAE 108
>gi|242036137|ref|XP_002465463.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
gi|241919317|gb|EER92461.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
Length = 169
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
LFVSGLS+ TTDE L+ F+ FG ++ AK+V R SG SKGFGFV+YAT+E A KA +
Sbjct: 64 KLFVSGLSRLTTDEKLQGAFAPFGRILEAKVVTDRVSGRSKGFGFVRYATIEEAEKARQE 123
Query: 99 MDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYG 133
M+ KFLDGWVIFV+ AKPRQP P Q+ ++ G
Sbjct: 124 MNAKFLDGWVIFVDPAKPRQPKPAPEQDTSSSHVG 158
>gi|226529880|ref|NP_001150360.1| RNA binding protein [Zea mays]
gi|195638638|gb|ACG38787.1| RNA binding protein [Zea mays]
gi|414866145|tpg|DAA44702.1| TPA: RNA binding protein [Zea mays]
Length = 166
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NLFVSGLS+ TTDE L+ F+ FG ++ AK+V R SG SKGFGFV+YAT+E A +A +
Sbjct: 61 NLFVSGLSRLTTDEKLQGAFAPFGRLLEAKVVTDRVSGRSKGFGFVRYATIEEAERARQE 120
Query: 99 MDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYG 133
M+ KFLDGWVIFV+ AKPRQP P Q+ + G
Sbjct: 121 MNAKFLDGWVIFVDPAKPRQPKPAPQQDTGSSHAG 155
>gi|351724829|ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycine max]
gi|255628209|gb|ACU14449.1| unknown [Glycine max]
Length = 139
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 74/109 (67%), Gaps = 1/109 (0%)
Query: 12 GLRRLFSTSPFSSSLNPPQRPQAEPST-NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIV 70
G++RL +P S R + ++ LFVSGL + T DE L++ FS+FG++V AK++
Sbjct: 6 GVQRLLRRTPLVHSHYASIRLSSTLTSPKLFVSGLCRLTIDEKLKEAFSSFGQLVEAKVI 65
Query: 71 KHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
R SG SKGF FV Y T+E A KA EGM+ KFLDGWVIFV+ AKPR+P
Sbjct: 66 IDRASGRSKGFAFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPREP 114
>gi|356505124|ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 139
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Query: 12 GLRRLFSTSPFSSSLNPPQRPQAE-PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIV 70
G +RL +P S R + S LFVSGLS+ T DE L++ FS+FG++V AK++
Sbjct: 6 GAQRLLRHTPLVHSHYASIRLSSTLTSPKLFVSGLSRLTKDENLKEAFSSFGQLVEAKVI 65
Query: 71 KHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
R SG SKGF FV Y T+E A +A EGM+ KFLDGWVIFV+ AKPR+P
Sbjct: 66 TDRASGRSKGFAFVTYTTIEEAERAREGMNAKFLDGWVIFVDPAKPREP 114
>gi|357510439|ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
gi|355500523|gb|AES81726.1| RNA binding protein [Medicago truncatula]
Length = 141
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 74/111 (66%), Gaps = 3/111 (2%)
Query: 12 GLRRLF--STSPFSSSLNPPQRPQAE-PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAK 68
G RL S SP SS R + S LF+SGLS+ TTDE L + FS FG+++ AK
Sbjct: 6 GFHRLLRHSQSPLVSSHFTSIRLNSTLTSPKLFISGLSRLTTDEKLTEAFSPFGQLLEAK 65
Query: 69 IVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
++ R SG SKGF FV Y+T+E A KA EGM+ KFLDGWVIFV+ AKPR+P
Sbjct: 66 VITDRGSGRSKGFAFVSYSTIEEAEKAREGMNAKFLDGWVIFVDPAKPREP 116
>gi|388519245|gb|AFK47684.1| unknown [Lotus japonicus]
Length = 138
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 64/80 (80%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+SGLS++TTD L + F+ FG+++ AK++ R SG SKGFGFV YA++E A KA +GM
Sbjct: 33 LFISGLSRQTTDRKLNEAFAPFGQLIEAKVITDRASGRSKGFGFVSYASIEEAEKAGKGM 92
Query: 100 DGKFLDGWVIFVEYAKPRQP 119
+ KFLDGWVIFV+ AKPR+P
Sbjct: 93 NAKFLDGWVIFVDPAKPREP 112
>gi|125543335|gb|EAY89474.1| hypothetical protein OsI_11005 [Oryza sativa Indica Group]
Length = 173
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 63/79 (79%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+SGLS+ TTDE L++ F+ FG+++ AK++ R SG SKGFGFV+YATLE A A + M
Sbjct: 69 LFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEEAENARQEM 128
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
+ KFLDGWVIFV+ AKPRQ
Sbjct: 129 NAKFLDGWVIFVDPAKPRQ 147
>gi|115452257|ref|NP_001049729.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|108707493|gb|ABF95288.1| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113548200|dbj|BAF11643.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|125543333|gb|EAY89472.1| hypothetical protein OsI_11004 [Oryza sativa Indica Group]
gi|125585797|gb|EAZ26461.1| hypothetical protein OsJ_10350 [Oryza sativa Japonica Group]
Length = 173
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 63/79 (79%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+SGLS+ TTDE L++ F+ FG+++ AK++ R SG SKGFGFV+YATLE A A + M
Sbjct: 69 LFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEEAENARQEM 128
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
+ KFLDGWVIFV+ AKPRQ
Sbjct: 129 NAKFLDGWVIFVDPAKPRQ 147
>gi|225439737|ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|297741476|emb|CBI32608.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 73/111 (65%), Gaps = 2/111 (1%)
Query: 7 VAAPRGLRRLF--STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEV 64
+A RR+ S++ S +P + S LFVSGLS+ TTDE L++ FS FG++
Sbjct: 1 MAFASSFRRVLTGSSTILQSQFSPARFNSTVTSPKLFVSGLSRLTTDEKLKEAFSPFGQL 60
Query: 65 VHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAK 115
+ AK++ R SG SKGFGFV Y TLE A KA EGM+ KFLDGWVIFV+ AK
Sbjct: 61 LEAKVITDRVSGRSKGFGFVTYTTLEEAEKAREGMNAKFLDGWVIFVDPAK 111
>gi|357112848|ref|XP_003558218.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 168
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 67/94 (71%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFVSGLS+ TTDE L++ F FG+V+ AK++ R SG SKGFGFV+Y +L+ A A +GM
Sbjct: 64 LFVSGLSRLTTDEKLKNAFIPFGQVLEAKVITDRISGRSKGFGFVRYVSLQEAEAARQGM 123
Query: 100 DGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYG 133
+ KFLDGWVIFV+ AKPR+ P ++ + G
Sbjct: 124 NAKFLDGWVIFVDPAKPREQKPAPQPDSASSHTG 157
>gi|351725889|ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 61/82 (74%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P T L+VSGLS RTT+E+LR+ F FG++V K+V R + +GF F++YAT E + KA
Sbjct: 86 PQTKLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKA 145
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
IEGM GKFLDG VIFVE AKPR
Sbjct: 146 IEGMHGKFLDGRVIFVEVAKPR 167
>gi|255581040|ref|XP_002531336.1| RNA binding protein, putative [Ricinus communis]
gi|223529058|gb|EEF31043.1| RNA binding protein, putative [Ricinus communis]
Length = 144
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 67/94 (71%), Gaps = 9/94 (9%)
Query: 22 FSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGF 81
F S+L P+ LFVSGLS+ TTDE L++ FS FG++V AK++ R SG SKGF
Sbjct: 29 FHSTLTCPR---------LFVSGLSRLTTDEKLKEAFSPFGQLVDAKVIIDRASGRSKGF 79
Query: 82 GFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAK 115
GF+ YAT+E A KA EGM+ KFLDGWVIFV+ AK
Sbjct: 80 GFITYATIEEAEKAREGMNAKFLDGWVIFVDPAK 113
>gi|225464267|ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 71/108 (65%), Gaps = 4/108 (3%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKI 69
PR LF+ + SS N P P+ T L+VSGLS RTT+E+LR+ F FG++V +
Sbjct: 55 PRNGNDLFAVACLPSSPNQPSIPK----TRLYVSGLSFRTTEESLRNAFETFGQLVEVNL 110
Query: 70 VKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V + + +GF F++Y+T E + KAIEGM GKFLDG VIFVE AKPR
Sbjct: 111 VMDKIANRPRGFAFLRYSTEEESEKAIEGMHGKFLDGRVIFVEVAKPR 158
>gi|449448655|ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 146
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 70/103 (67%), Gaps = 9/103 (8%)
Query: 13 LRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKH 72
LR ++ SS+L P+ LF+SGLS+ TTDE LR+ FS+FG++V AK+V
Sbjct: 24 LRSQWNAVRLSSTLTSPK---------LFISGLSRLTTDEKLREAFSSFGQLVDAKVVTD 74
Query: 73 RESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAK 115
R +G SKGF FV Y+T++ A KA E M+ KFLDGWVIFV+ AK
Sbjct: 75 RATGRSKGFAFVTYSTIDEAEKAREEMNAKFLDGWVIFVDPAK 117
>gi|297827259|ref|XP_002881512.1| hypothetical protein ARALYDRAFT_902894 [Arabidopsis lyrata subsp.
lyrata]
gi|297327351|gb|EFH57771.1| hypothetical protein ARALYDRAFT_902894 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 75/118 (63%), Gaps = 10/118 (8%)
Query: 13 LRRLF--STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIV 70
RRL S S SS +R S LFVSGLS+ TT+E L+D F++FG++V A+++
Sbjct: 7 FRRLVAGSNSLLSSPSFCVRRCSTLTSPRLFVSGLSRLTTNEKLQDAFASFGQLVDARVI 66
Query: 71 KHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAK--------PRQPP 120
RE+G SKGFGFV YAT+E A KA M+ KFLDGWVIFV+ A+ R+PP
Sbjct: 67 TDRETGRSKGFGFVTYATIEDAEKAKAEMNAKFLDGWVIFVDPARPREPRRPLQREPP 124
>gi|15224298|ref|NP_181287.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20197470|gb|AAM15089.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21536972|gb|AAM61313.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|114050677|gb|ABI49488.1| At2g37510 [Arabidopsis thaliana]
gi|330254316|gb|AEC09410.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 142
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 62/83 (74%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R S LFVSGLS+ TT+E L+D F++FG++V A+++ R+SG SKGFGFV YAT+
Sbjct: 26 RRCSTLTSPRLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATI 85
Query: 90 EAAGKAIEGMDGKFLDGWVIFVE 112
E A KA M+ KFLDGWVIFV+
Sbjct: 86 EDAEKAKAEMNAKFLDGWVIFVD 108
>gi|388505224|gb|AFK40678.1| unknown [Lotus japonicus]
Length = 187
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 59/80 (73%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
T L+VSGLS RTT+E+LR+ F FG++V +V + + +GF F++YAT E + KAIE
Sbjct: 94 TRLYVSGLSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRYATEEESQKAIE 153
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
GM GKFLDG VIFVE AKPR
Sbjct: 154 GMHGKFLDGRVIFVEVAKPR 173
>gi|15219486|ref|NP_177494.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11120799|gb|AAG30979.1|AC012396_15 RNA-binding glycine-rich protein, putative [Arabidopsis thaliana]
gi|62867629|gb|AAY17418.1| At1g73530 [Arabidopsis thaliana]
gi|114050615|gb|ABI49457.1| At1g73530 [Arabidopsis thaliana]
gi|332197351|gb|AEE35472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 181
Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 59/82 (71%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P T L+VSGLS RTT++TLRDTF FG ++H +V + + KGF F++Y T E A KA
Sbjct: 75 PKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKA 134
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
I+GM GKFLDG VIFVE AK R
Sbjct: 135 IQGMHGKFLDGRVIFVEEAKTR 156
>gi|297842099|ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334772|gb|EFH65190.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 59/80 (73%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
T L+VSGLS RTT++TLRDTF FG+++H +V + + +GF F++Y T E A KAI+
Sbjct: 77 TKLYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYETEEEAMKAIQ 136
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
GM GKFLDG VIFVE AK R
Sbjct: 137 GMHGKFLDGRVIFVEEAKTR 156
>gi|224120444|ref|XP_002318331.1| predicted protein [Populus trichocarpa]
gi|222859004|gb|EEE96551.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 58/80 (72%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
T L+VSGLS RTT+E+LR+ F FG++V +V + + +GF F++Y T E A KAIE
Sbjct: 90 TKLYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKAIE 149
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
GM GKFLDG VIFVE AKPR
Sbjct: 150 GMHGKFLDGRVIFVEVAKPR 169
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640298|gb|ACG39617.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 64/100 (64%)
Query: 18 STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
+TS SS+++ Q + S+ LFV GLS T D +LRD F+ +G+V+ AKI+ RESG
Sbjct: 14 ATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGR 73
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
S+GFGF+ Y + E A AI MDGK LDG I V +A R
Sbjct: 74 SRGFGFITYTSSEEASAAITAMDGKTLDGRNIRVNHANER 113
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ LF+ GL+ T + LRD FS FGE++ ++++ RE+G S+GFGFV Y T + A KA+
Sbjct: 36 SSKLFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQKAM 95
Query: 97 EGMDGKFLDGWVIFVEYAKPRQP 119
E MDG+ LDG I V YA RQP
Sbjct: 96 EAMDGRVLDGRTIRVNYATQRQP 118
>gi|351725255|ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 20 SPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSK 79
+P SS LN + S+ LF+ GLS D++L+D FS FG+VV AK++ R+SG S+
Sbjct: 21 APVSSMLNYIR---CMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSR 77
Query: 80 GFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
GFGFV ++ E+A A+ MDGK LDG I V YA R
Sbjct: 78 GFGFVNFSNDESASSALSAMDGKDLDGRSIRVSYANDR 115
>gi|363543257|ref|NP_001241843.1| uncharacterized protein LOC100857047 [Zea mays]
gi|238007748|gb|ACR34909.1| unknown [Zea mays]
gi|413916459|gb|AFW56391.1| putative glycine-rich protein [Zea mays]
Length = 261
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 61/95 (64%)
Query: 23 SSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFG 82
SS+++ Q + S+ LFV GLS T D +LRD F+ +G+V+ AKI+ RESG S+GFG
Sbjct: 16 SSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFG 75
Query: 83 FVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
F+ Y + E A AI MDGK LDG I V +A R
Sbjct: 76 FITYTSSEEASAAITAMDGKTLDGRNIRVNHANER 110
>gi|118487563|gb|ABK95608.1| unknown [Populus trichocarpa]
Length = 133
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 61/91 (67%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ LF+ GL T D+TL+D FS FGEV A+++ RE+G S+GFGFV Y ++E A +A+
Sbjct: 35 SSKLFIGGLPWSTDDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEAL 94
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLPSQNN 127
MDG+ L G + V +A+ R+PP + N+
Sbjct: 95 SAMDGQNLGGRTVRVSFAEERRPPQSYNDNH 125
>gi|255563618|ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 134
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Query: 21 PFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKG 80
P SS LN + S+ LF+ GLS T D++L+D FS FG+VV A+++ R++G S+G
Sbjct: 22 PVSSMLNSIR---CMSSSKLFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTGRSRG 78
Query: 81 FGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP-PTLPSQNNTNF 130
FGFV ++++++A A+ MDG+ L G I V YA R P P P N F
Sbjct: 79 FGFVDFSSVDSASSALSAMDGQELHGRNIRVSYATERAPRPGGPRSFNNGF 129
>gi|1009363|dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]
Length = 144
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 65/102 (63%), Gaps = 4/102 (3%)
Query: 18 STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
+TSP S L+ + ST LFV GLS T D++LRD F+ FG+VV A+++ R+SG
Sbjct: 22 ATSPMKSMLDAVR----CMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGR 77
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
S+GFGFV ++ E A +AI+ MDG+ L G I V A+ R P
Sbjct: 78 SRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVRIAQERAP 119
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 65/105 (61%), Gaps = 5/105 (4%)
Query: 13 LRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKH 72
L+R S+SP Q + S+ LFV GLS T +++LRDTF+ +G+V+ AKI+
Sbjct: 11 LKRATSSSPA-----LYQSIRCMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIIND 65
Query: 73 RESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
RE+G S+GFGF+ YA+ E A AI +DGK LDG I V A R
Sbjct: 66 RETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 65/105 (61%), Gaps = 5/105 (4%)
Query: 13 LRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKH 72
L+R S+SP Q + S+ LFV GLS T +++LRDTF+ +G+V+ AKI+
Sbjct: 11 LKRATSSSPA-----LYQSIRCMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIIND 65
Query: 73 RESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
RE+G S+GFGF+ YA+ E A AI +DGK LDG I V A R
Sbjct: 66 RETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
>gi|224060337|ref|XP_002300149.1| predicted protein [Populus trichocarpa]
gi|222847407|gb|EEE84954.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 21 PFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKG 80
P S LN + S+ LF+ GL D+TL+D FS FGEV A+++ RE+G S+G
Sbjct: 22 PMVSMLNTIR---CMSSSKLFIGGLPWSADDQTLKDAFSGFGEVTEARVIMDRETGRSRG 78
Query: 81 FGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQNN 127
FGFV Y ++E A +A+ MDG+ L G + V +A+ R+PP + N+
Sbjct: 79 FGFVHYDSVENASEALSAMDGQNLGGRTVRVSFAEERRPPQSYNDNH 125
>gi|2366750|dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931789|gb|AFP57444.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich protein [Nicotiana acuminata]
gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich protein [Nicotiana alata]
gi|399931809|gb|AFP57454.1| RNA-binding glycine-rich protein [Nicotiana sylvestris]
Length = 144
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 65/102 (63%), Gaps = 4/102 (3%)
Query: 18 STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
+TSP S L+ + ST LFV GLS T D++LRD F+ FG+VV A+++ R+SG
Sbjct: 22 ATSPMPSMLDAVR----CMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGR 77
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
S+GFGFV ++ E A +AI+ MDG+ L G I V A+ R P
Sbjct: 78 SRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQERAP 119
>gi|399931807|gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 66/102 (64%), Gaps = 4/102 (3%)
Query: 18 STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
+TSP S L+ + ST LFV GLS T D++LRD F+ FG+VV A+++ R+SG
Sbjct: 22 ATSPMPSMLDAVR----CMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGR 77
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
S+GFGFV ++ E+A +AI+ MDG+ L G I V A+ R P
Sbjct: 78 SRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERAP 119
>gi|399931799|gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 66/102 (64%), Gaps = 4/102 (3%)
Query: 18 STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
+TSP S L+ + ST LFV GLS T D++LRD F+ FG+VV A+++ R+SG
Sbjct: 22 ATSPMPSMLDAIR----CMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGR 77
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
S+GFGFV ++ E+A +AI+ MDG+ L G I V A+ R P
Sbjct: 78 SRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERAP 119
>gi|116779573|gb|ABK21345.1| unknown [Picea sitchensis]
gi|224285462|gb|ACN40453.1| unknown [Picea sitchensis]
Length = 198
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Query: 24 SSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGF 83
+ L PP R + + LFV+GLS TT+ TL++ FS +G+VV +I+ ++ + SKGFGF
Sbjct: 77 ACLPPPTRTR---NNKLFVTGLSIYTTERTLQNAFSNYGKVVDVRIIMNKTTRRSKGFGF 133
Query: 84 VKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKP 116
V+++T E A A++ M+GK L+GW+I V+ AKP
Sbjct: 134 VEFSTEEEANTALKEMNGKILNGWLISVDIAKP 166
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
PST LF+ G+S T +++LR+ FS +GEVV A+I+ RE+G S+GFGF+ Y ++E A A
Sbjct: 40 PSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSA 99
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
I+ +DG+ L G I V YA R
Sbjct: 100 IQALDGQDLHGRPIRVNYANER 121
>gi|399931805|gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
Length = 144
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 66/102 (64%), Gaps = 4/102 (3%)
Query: 18 STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
+TSP S L+ + ST LFV GLS T D++LRD F+ FG+VV A+++ R+SG
Sbjct: 22 ATSPMPSMLDAVR----CMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGR 77
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
S+GFGFV ++ E+A +AI+ MDG+ L G I V A+ R P
Sbjct: 78 SRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVTIAQERAP 119
>gi|224110196|ref|XP_002315444.1| predicted protein [Populus trichocarpa]
gi|222864484|gb|EEF01615.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 5/101 (4%)
Query: 24 SSLNPPQRPQAEPSTN-----LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYS 78
+S NPP +A T+ LF++GLS T+++TLR F FGE+V KI+ + S S
Sbjct: 200 NSANPPDSSEASQITHVRTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRS 259
Query: 79 KGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
KG+ FVKY T EAA A++ M+GK ++GW+I V+ AK P
Sbjct: 260 KGYAFVKYTTEEAASSALKEMNGKIINGWMIVVDVAKSNPP 300
>gi|399931797|gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Query: 13 LRRLFSTSPFSSSLNPPQRPQAE--PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIV 70
LR+ S + S++ P A ST LFV GLS T D++LRD F+ FG+VV A+++
Sbjct: 11 LRQSISGNAVSATSTMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVI 70
Query: 71 KHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
R+SG S+GFGFV ++ E+A +AI+ MDG+ L G I V A+ R P
Sbjct: 71 VDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERAP 119
>gi|242083506|ref|XP_002442178.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
gi|241942871|gb|EES16016.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
Length = 250
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ LFV GLS T D +LRD F+ +GEV+ A+I+ RESG S+GFGFV Y + E A AI
Sbjct: 29 SSKLFVGGLSYGTDDHSLRDEFAKYGEVIEARIILDRESGRSRGFGFVTYTSSEEASAAI 88
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
MDGK LDG I V +A R
Sbjct: 89 TAMDGKTLDGRSIRVNHANER 109
>gi|222629430|gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japonica Group]
Length = 149
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%)
Query: 27 NPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKY 86
+PP ++ L+VSGLS RTT+E+LR+ F FG++ +V R + +GF F+ Y
Sbjct: 56 HPPPSASHGAASRLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSY 115
Query: 87 ATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
A+ E + A+EGM GKFLDG VIFVE A+ R
Sbjct: 116 ASEEESKNAMEGMQGKFLDGRVIFVEVARQR 146
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q ++ S LFV G+S T D +LR++F+ +GEV+ K++ RE+G S+GFGFV +AT
Sbjct: 32 QAIRSMSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATS 91
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPRQPP 120
E A AI+GMDG+ L G I V YA R P
Sbjct: 92 EDASSAIQGMDGQDLHGRRIRVNYATERSRP 122
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q ++ S LFV G+S T D +LR++F+ +GEV+ K++ RE+G S+GFGFV +AT
Sbjct: 32 QAIRSMSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATS 91
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPRQPP 120
E A AI+GMDG+ L G I V YA R P
Sbjct: 92 EDASSAIQGMDGQDLHGRRIRVNYATERSRP 122
>gi|218195435|gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indica Group]
Length = 152
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%)
Query: 27 NPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKY 86
+PP ++ L+VSGLS RTT+E+LR+ F FG++ +V R + +GF F+ Y
Sbjct: 59 HPPPSASHGAASRLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSY 118
Query: 87 ATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
A+ E + A+EGM GKFLDG VIFVE A+ R
Sbjct: 119 ASEEESKNAMEGMQGKFLDGRVIFVEVARQR 149
>gi|449516497|ref|XP_004165283.1| PREDICTED: glycine-rich RNA-binding protein 2-like, partial
[Cucumis sativus]
Length = 100
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%)
Query: 45 LSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFL 104
LS+ TTDE LR+ FS+FG++ AK+V R +G SKGF FV Y+T++ A KA E M+ KFL
Sbjct: 1 LSRLTTDEKLREAFSSFGQLADAKVVTDRATGRSKGFAFVTYSTIDEAEKAREEMNAKFL 60
Query: 105 DGWVIFVEYAK 115
DGWVIFV+ AK
Sbjct: 61 DGWVIFVDPAK 71
>gi|246771225|gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
Query: 18 STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
+++P S LN + S+ LFV GLS T D++L+D FS+FGEV AK++ RE+G
Sbjct: 18 NSAPIDSMLNSIR---CMSSSRLFVGGLSWGTDDQSLKDAFSSFGEVTDAKVITDRETGR 74
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKP 116
S+GFGFV + EAAG A+ MDG L+G I V +A+
Sbjct: 75 SRGFGFVNFVDNEAAGSALSSMDGVELNGRSIRVSFAQE 113
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q ++ S LFV G+S T D +LR++F+ +GEV+ K++ RE+G S+GFGF+ +AT
Sbjct: 32 QAIRSMSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATS 91
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPRQPP 120
E A AI+GMDG+ L G I V YA R P
Sbjct: 92 EDASSAIQGMDGQDLHGRRIRVNYATERSRP 122
>gi|326490373|dbj|BAJ84850.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 299
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q ++ S+ +FV G+S T D++L D FS +G+V AK++ RESG S+GFGFV + +
Sbjct: 23 QAVRSMSSSKVFVGGISYGTDDQSLGDAFSNYGQVTEAKVIMDRESGRSRGFGFVTFTSS 82
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
E AG AI GMDGK L G ++ V YA R
Sbjct: 83 EEAGAAITGMDGKDLQGRIVRVSYAHDR 110
>gi|399931811|gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 58/83 (69%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LFV GLS T D++LRD F+ FG+VV A+++ R+SG S+GFGFV ++ E+A +AI
Sbjct: 37 STKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAI 96
Query: 97 EGMDGKFLDGWVIFVEYAKPRQP 119
+ MDG+ L G I V A+ R P
Sbjct: 97 KAMDGQELQGRNIRVSIAQERAP 119
>gi|449500867|ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 70/117 (59%), Gaps = 8/117 (6%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQA--EPSTNLFVSGLSKRTTDETLRDTFS 59
A+R A+A R L S P PP R + +T LFV GLS TTD+ L + FS
Sbjct: 3 AIRKAMAITSNRRVLPSLFP------PPSRLVSFRAIATKLFVGGLSYYTTDKGLSEAFS 56
Query: 60 AFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKP 116
+G+V+ A +V R S SKGFGFV +A+L+ A A+ M+GK L+G VIFV YAKP
Sbjct: 57 QYGQVIEATVVMDRVSDKSKGFGFVTFASLDEAHTALSEMNGKPLNGRVIFVNYAKP 113
>gi|413938711|gb|AFW73262.1| chloroplast protein synthesis 4 [Zea mays]
Length = 400
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV+GLS T+++TLR F FGE+V KI+ R S SKG+ FV+Y T EA G A++ M
Sbjct: 303 LFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEEAGGAALKAM 362
Query: 100 DGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQ 131
+G+ ++GW+I V+ AK R L +N F+
Sbjct: 363 NGQIINGWMIVVDVAKTRSRDRLSGGSNQAFR 394
>gi|259490527|ref|NP_001159310.1| uncharacterized protein LOC100304402 [Zea mays]
gi|223943329|gb|ACN25748.1| unknown [Zea mays]
gi|413938710|gb|AFW73261.1| chloroplast protein synthesis 4 [Zea mays]
Length = 398
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV+GLS T+++TLR F FGE+V KI+ R S SKG+ FV+Y T EA G A++ M
Sbjct: 301 LFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEEAGGAALKAM 360
Query: 100 DGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQ 131
+G+ ++GW+I V+ AK R L +N F+
Sbjct: 361 NGQIINGWMIVVDVAKTRSRDRLSGGSNQAFR 392
>gi|449462934|ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 70/117 (59%), Gaps = 8/117 (6%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAE--PSTNLFVSGLSKRTTDETLRDTFS 59
A+R A+A R L S P PP R + +T LFV GLS TTD+ L + FS
Sbjct: 3 AIRKAMAITSNRRVLPSLFP------PPSRLVSYRGIATKLFVGGLSYYTTDKGLSEAFS 56
Query: 60 AFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKP 116
+G+V+ A +V R S SKGFGFV +A+L+ A A+ M+GK L+G VIFV YAKP
Sbjct: 57 QYGQVIEATVVMDRVSDKSKGFGFVTFASLDEAHTALSEMNGKPLNGRVIFVNYAKP 113
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
E + NLFV LS + LR+ F FGE+ ++V RESG SKGFG+V+Y T EAA K
Sbjct: 299 EGAKNLFVGSLSWNVDEGWLRNEFEQFGEIAAVRVVTDRESGRSKGFGYVEYTTNEAAKK 358
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYGRQ 135
A+E M GK +DG I V+++ PR P P Q+ + YG Q
Sbjct: 359 ALEEMKGKDIDGRTINVDFSAPR--PENPRQDRSRL-YGDQ 396
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S +FV+ LS ++ ++ F FG +V +I ESG KGF +++Y +++A KA+
Sbjct: 401 SETVFVANLSFEADEQIVQTEFEGFGNIVGLRIPTDPESGQPKGFCYIQYDRVDSARKAV 460
Query: 97 EGMDGKFLDGWVIFVEYAKPRQP 119
E M+G + G I +++ PR P
Sbjct: 461 EEMNGALVAGRAIRTDFSTPRDP 483
>gi|222623613|gb|EEE57745.1| hypothetical protein OsJ_08262 [Oryza sativa Japonica Group]
Length = 369
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 5/101 (4%)
Query: 25 SLNPPQRPQAEPSTN-LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGF 83
S + QAE T LFV+GLS T+++TLR F FGE+V KI+ + S SKG+ F
Sbjct: 251 SFKSSEATQAEVKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAF 310
Query: 84 VKYATLEAAGKAIEGMDGKFLDGWVIFVEYAK----PRQPP 120
++Y T EA G A++ M+G+ ++GW+I V+ AK RQPP
Sbjct: 311 IEYTTEEAGGAALKAMNGQIINGWMIVVDVAKHRSRDRQPP 351
>gi|351725383|ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
gi|255631508|gb|ACU16121.1| unknown [Glycine max]
Length = 130
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 54/77 (70%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV GLS TT+ L + FS +G+V+ AKIV R S SKGFGFV +A+ + A AIE M
Sbjct: 31 LFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAENAIEDM 90
Query: 100 DGKFLDGWVIFVEYAKP 116
GK L+G VIFV+YAKP
Sbjct: 91 KGKTLNGRVIFVDYAKP 107
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
PST LF+ G+S T +++LR+ FS +GEVV A+I+ RE+G S+GFGF+ Y ++E A A
Sbjct: 40 PSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSA 99
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
I+ +DG+ L G I V YA R
Sbjct: 100 IQALDGQDLHGRPIRVNYANER 121
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
PST LF+ G+S T +++LR+ FS +GEVV A+I+ RE+G S+GFGF+ Y ++E A A
Sbjct: 40 PSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSA 99
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
I+ +DG+ L G I V YA R
Sbjct: 100 IQALDGQDLHGRPIRVNYANER 121
>gi|356576299|ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791652 [Glycine max]
Length = 386
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 56/80 (70%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV+GLS T+++TLR F FGE+V K++ + S SKG+ FV+Y T EAA A++ M
Sbjct: 299 LFVTGLSFYTSEKTLRAAFEGFGELVEVKVIMDKISKRSKGYAFVEYTTEEAASAALKEM 358
Query: 100 DGKFLDGWVIFVEYAKPRQP 119
+GK ++GW+I V+ AKP P
Sbjct: 359 NGKIINGWMIVVDVAKPNPP 378
>gi|115448473|ref|NP_001048016.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|46390469|dbj|BAD15930.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|46390865|dbj|BAD16369.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113537547|dbj|BAF09930.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|218191513|gb|EEC73940.1| hypothetical protein OsI_08808 [Oryza sativa Indica Group]
Length = 399
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 5/101 (4%)
Query: 25 SLNPPQRPQAEPSTN-LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGF 83
S + QAE T LFV+GLS T+++TLR F FGE+V KI+ + S SKG+ F
Sbjct: 281 SFKSSEATQAEVKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAF 340
Query: 84 VKYATLEAAGKAIEGMDGKFLDGWVIFVEYAK----PRQPP 120
++Y T EA G A++ M+G+ ++GW+I V+ AK RQPP
Sbjct: 341 IEYTTEEAGGAALKAMNGQIINGWMIVVDVAKHRSRDRQPP 381
>gi|399931803|gb|AFP57451.1| RNA-binding glycine-rich protein [Nicotiana plumbaginifolia]
Length = 144
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Query: 18 STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
+TSP S L+ + ST LFV GLS T D++LRD F+ FG+VV A+++ R+SG
Sbjct: 22 ATSPMPSMLDAVR----CMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGR 77
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
+GFGFV ++ E A +AI+ MDG+ L G I V A+ R P
Sbjct: 78 PRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQERAP 119
>gi|351723185|ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 20 SPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSK 79
+P +S LN + S+ LF+ GLS D++L+D FS FG+VV AK++ R+SG S+
Sbjct: 21 APVASMLNYIR---CMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSR 77
Query: 80 GFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
GFGFV ++ E+A A+ MDGK L+G I V YA +
Sbjct: 78 GFGFVNFSNDESASSALSAMDGKDLNGRSIRVSYANDK 115
>gi|226498016|ref|NP_001151732.1| RNA binding protein [Zea mays]
gi|195649405|gb|ACG44170.1| RNA binding protein [Zea mays]
Length = 147
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 12 GLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVK 71
G+R S ++ L PP +T L+VSGLS RTT+ +LRD F FG++ +V
Sbjct: 40 GVRNQQRASTATACLPPPSTSHGA-ATRLYVSGLSFRTTERSLRDAFEKFGDLTEVCLVM 98
Query: 72 HRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
R + +GF F+ Y E A A+EGM GKFLDG VIFVE AK R
Sbjct: 99 DRVAKRPRGFAFLSYTGEEEARGAMEGMHGKFLDGRVIFVEVAKRR 144
>gi|359482021|ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 57/81 (70%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
++ LFV GLS TT++ L + FS +G+VV AKIV R S SKGFGFV +A+ E A KA
Sbjct: 33 ASKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASEEEAQKAR 92
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
MDGK L+G IFV+YAKPR
Sbjct: 93 TEMDGKELNGRTIFVDYAKPR 113
>gi|224128992|ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus trichocarpa]
gi|222839293|gb|EEE77630.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Query: 21 PFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKG 80
P +S LN + S+ LF+ GL+ T D++L+D FS FGEV A+++ R++G S+G
Sbjct: 22 PMASMLNSIR---CMSSSKLFIGGLAWSTDDQSLKDAFSGFGEVTEARVITDRDTGRSRG 78
Query: 81 FGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPP 120
FGFV Y + E+A +A+ MDG+ L G I V YA ++ P
Sbjct: 79 FGFVSYESTESASEALSAMDGQELGGRNIRVGYATDKRQP 118
>gi|399931801|gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goodspeedii]
Length = 144
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 57/83 (68%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LFV GLS T D++LRD + FG+VV A+++ R+SG S+GFGFV ++ E+A +AI
Sbjct: 37 STKLFVGGLSWGTDDQSLRDALATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAI 96
Query: 97 EGMDGKFLDGWVIFVEYAKPRQP 119
+ MDG+ L G I V A+ R P
Sbjct: 97 KAMDGQELQGRNIRVNIAQERAP 119
>gi|116791319|gb|ABK25933.1| unknown [Picea sitchensis]
Length = 221
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 56/82 (68%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
S+ LF+ GLS D++LR++F+ +GEV+ A+I+ RE+G S+GFGF+ + + E A A
Sbjct: 38 SSSRLFIGGLSYGMDDQSLRESFTEYGEVIEARIIHDRETGRSRGFGFISFTSNEEAAAA 97
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
I GMDGK L G ++ V YA R
Sbjct: 98 ITGMDGKDLHGRLVHVNYATER 119
>gi|226506948|ref|NP_001149776.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195633803|gb|ACG36746.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 276
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 55/81 (67%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ LFV G+S +T D +LRD F+ +G+V+ A+I+ RESG S+GFGFV Y + E A AI
Sbjct: 29 SSKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAI 88
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
+DGK LDG I V +A +
Sbjct: 89 TALDGKTLDGRSIRVNHANEK 109
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 57/83 (68%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LFV GLS T D++L++ F++FG+V A+++ RESG S+GFGFV +A + A A+
Sbjct: 36 STKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAM 95
Query: 97 EGMDGKFLDGWVIFVEYAKPRQP 119
+ MDGK L+G I V +A R P
Sbjct: 96 DAMDGKELEGRSIRVNFANERPP 118
>gi|357167535|ref|XP_003581210.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like
[Brachypodium distachyon]
Length = 137
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 72/108 (66%), Gaps = 3/108 (2%)
Query: 14 RRLF--STSPFSSSLNPPQRPQAEPSTN-LFVSGLSKRTTDETLRDTFSAFGEVVHAKIV 70
RRLF + +P +++ P Q+ T+ LF+ GLS+ T++TL + F+ +G+V+ A IV
Sbjct: 9 RRLFFSARNPAGAAMRPLLLAQSRGITHKLFIGGLSQFATEDTLAEAFARYGQVLEATIV 68
Query: 71 KHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
+ + SKGFGFVK+A+ E A KA + M+GK L+G VI+V+ AK +Q
Sbjct: 69 TDKMTNRSKGFGFVKFASEEEANKARDEMNGKVLNGRVIYVDIAKAKQ 116
>gi|225464121|ref|XP_002264164.1| PREDICTED: uncharacterized protein LOC100265361 [Vitis vinifera]
Length = 409
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 58/86 (67%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
+P + LFV+GLS T+++TLR F FGE+V KI+ + S SKG+ F++Y T E
Sbjct: 310 QPTNIKTKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEE 369
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKP 116
AA A++ M+GK ++GW+I V+ AKP
Sbjct: 370 AASAALKEMNGKIINGWMIVVDVAKP 395
>gi|388502672|gb|AFK39402.1| unknown [Medicago truncatula]
Length = 140
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV GLS TT++TL D FS +G+VV AK++ R S SKG+GFV +A+ + A KAI M
Sbjct: 34 LFVGGLSFHTTEKTLSDAFSNYGQVVEAKVITDRISEKSKGYGFVTFASQDEAEKAITEM 93
Query: 100 DGKFLDGWVIFVEYAKP 116
+ K L+G V+FV+YAKP
Sbjct: 94 NEKALNGRVVFVDYAKP 110
>gi|146328793|ref|YP_001209360.1| RNA recognition motif-containing protein [Dichelobacter nodosus
VCS1703A]
gi|146232263|gb|ABQ13241.1| RNA recognition motif protein [Dichelobacter nodosus VCS1703A]
Length = 95
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V LS RTT++ LR+ FS FG+V +A I+K R+SG SKGFGFV+ EAA KAIE
Sbjct: 2 TNIYVGNLSYRTTEDELRNAFSQFGDVQNASIIKDRDSGRSKGFGFVEMPDAEAAKKAIE 61
Query: 98 GMDGKFLDGWVIFVEYAKPRQ-PPTLPSQNNTNF 130
++ K L G + + A+PR+ P +N++F
Sbjct: 62 SLNDKDLGGRNLKINEARPREMRPRRDKGSNSHF 95
>gi|212275199|ref|NP_001130054.1| uncharacterized protein LOC100191146 [Zea mays]
gi|194688180|gb|ACF78174.1| unknown [Zea mays]
gi|414878270|tpg|DAA55401.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 254
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 55/81 (67%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ LFV G+S +T D +LRD F+ +G+V+ A+I+ RESG S+GFGFV Y + E A AI
Sbjct: 29 SSKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAI 88
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
+DGK LDG I V +A +
Sbjct: 89 TALDGKTLDGRSIRVNHANEK 109
>gi|387861093|gb|AFK08576.1| glycine-rich RNA binding protein 2a [Camelina sativa]
gi|387861099|gb|AFK08579.1| glycine-rich RNA binding protein 2a [Camelina sativa]
Length = 160
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LFV GLS T D++LRD F+ FGEVV AK++ RE+G S+GFGFV ++ AA AI
Sbjct: 35 STKLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAI 94
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLP 123
MDGK L+G I V A R P+ P
Sbjct: 95 SEMDGKDLNGRNIRVNQANDR--PSAP 119
>gi|296087958|emb|CBI35241.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 58/86 (67%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
+P + LFV+GLS T+++TLR F FGE+V KI+ + S SKG+ F++Y T E
Sbjct: 216 QPTNIKTKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEE 275
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKP 116
AA A++ M+GK ++GW+I V+ AKP
Sbjct: 276 AASAALKEMNGKIINGWMIVVDVAKP 301
>gi|195654321|gb|ACG46628.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|238010482|gb|ACR36276.1| unknown [Zea mays]
Length = 252
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 55/81 (67%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ LFV G+S +T D +LRD F+ +G+V+ A+I+ RESG S+GFGFV Y + E A AI
Sbjct: 29 SSKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAI 88
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
+DGK LDG I V +A +
Sbjct: 89 TALDGKTLDGRSIRVNHANEK 109
>gi|147867424|emb|CAN83272.1| hypothetical protein VITISV_001132 [Vitis vinifera]
Length = 408
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 56/77 (72%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV+GLS T+++TLR F FGE+V KI+ + S SKG+ F++Y+T EAA A++ M
Sbjct: 318 LFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYSTEEAASAALKEM 377
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK ++GW+I V+ AKP
Sbjct: 378 NGKIINGWMIVVDVAKP 394
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 5/106 (4%)
Query: 18 STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
S +P SS LN + S+ LF+ GLS D++L+D F+++GEVV A+++ R++G
Sbjct: 19 SHAPVSSMLNYLRHM---SSSKLFIGGLSYGVDDQSLKDAFASYGEVVEARVITDRDTGR 75
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTLP 123
S+GFGFV + + E+A A+ MDG+ L+G I V YA R P+ P
Sbjct: 76 SRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDR--PSAP 119
>gi|399931791|gb|AFP57445.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 144
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 63/102 (61%), Gaps = 4/102 (3%)
Query: 18 STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
+TSP S L+ + ST LFV GLS T D++LRD F+ FG+VV A ++ +SG
Sbjct: 22 ATSPMPSMLDAVRCM----STKLFVGGLSWGTDDQSLRDAFATFGDVVDAGVIVDGDSGR 77
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
S+GFGFV ++ E A +AI+ MDG+ L G I V A+ R P
Sbjct: 78 SRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQERAP 119
>gi|255579369|ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
gi|223529933|gb|EEF31861.1| RNA binding protein, putative [Ricinus communis]
Length = 127
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 56/81 (69%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
+T LFV GLS TTD+ L + FS +G+VV A IV R SKGFGFV +A+ + A A+
Sbjct: 30 ATKLFVGGLSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGFVTFASEDEAHNAL 89
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
M+GK L+G VI+V+YAKPR
Sbjct: 90 SEMNGKTLNGRVIYVDYAKPR 110
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Query: 7 VAAPRGLRRLFSTSPFSSSLNPPQRPQA-----EPSTNLFVSGLSKRTTDETLRDTFSAF 61
+AA L LF S +SS + P ST LFV GLS T D++L+D F++F
Sbjct: 1 MAAFNKLGSLFRHSALASSASTGSTPAMFNAARLMSTKLFVGGLSWGTDDQSLKDAFTSF 60
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
GEVV A+++ R++G S+GFGFV ++ + A A+ MDG+ L+G I V +A R
Sbjct: 61 GEVVEARVITDRDTGKSRGFGFVSFSNGDDAKNAMSSMDGQELEGRNIHVNFANER 116
>gi|297804934|ref|XP_002870351.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
gi|297316187|gb|EFH46610.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LFV GLS T D++LRD F+ FGEVV AK++ RE+G S+GFGFV + AA AI
Sbjct: 34 STKLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFNDEGAASAAI 93
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLP 123
MDGK L+G I V A R P+ P
Sbjct: 94 SEMDGKDLNGRNIRVNVANER--PSAP 118
>gi|357442985|ref|XP_003591770.1| RNA-binding protein [Medicago truncatula]
gi|355480818|gb|AES62021.1| RNA-binding protein [Medicago truncatula]
Length = 284
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Query: 22 FSSSLNPPQRPQAE-----PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESG 76
+SLN P +A + LFV+GLS T+++TLR F FGE+V K++ + S
Sbjct: 171 LENSLNMPNSSEASQEASVKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIIDKISK 230
Query: 77 YSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
SKG+ F++Y T EAA A++ M+GK ++GW+I V+ AK P
Sbjct: 231 RSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVAKTTPP 273
>gi|357462751|ref|XP_003601657.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490705|gb|AES71908.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 146
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 63/100 (63%), Gaps = 4/100 (4%)
Query: 20 SPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSK 79
+P SS LN + S+ LF+ GLS D++LRD F+ +G+VV A+++ RE+G S+
Sbjct: 21 APVSSMLNYLRHM---SSSKLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSR 77
Query: 80 GFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
GFGFV + + E+A A+ MDG+ L+G I V YA RQ
Sbjct: 78 GFGFVNFTSEESATSALS-MDGQDLNGRNIRVSYANDRQA 116
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P+T LFV G+S T +++L D FS +G+V+ A+I+ RESG SKGFGFV Y T+E A A
Sbjct: 42 PNTKLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEASSA 101
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
I+ +DG+ L G + V +A R
Sbjct: 102 IQALDGQDLYGRRVGVNFANER 123
>gi|224091949|ref|XP_002309412.1| predicted protein [Populus trichocarpa]
gi|222855388|gb|EEE92935.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 57/81 (70%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
+T LFV GLS TT+ L + FS +G+VV AKIV R SKGFGFV YA+ + A KA+
Sbjct: 38 TTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASEDEAQKAL 97
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
+ M+GK L+G VI+V+YAK +
Sbjct: 98 DEMNGKALNGRVIYVDYAKLK 118
>gi|357143694|ref|XP_003573016.1| PREDICTED: uncharacterized protein LOC100843274 [Brachypodium
distachyon]
Length = 387
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 59/86 (68%), Gaps = 4/86 (4%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV+GLS T+++TLR F FGE+V KI+ + S SKG+ F++Y T +A G A++ M
Sbjct: 290 LFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEDAGGAALKAM 349
Query: 100 DGKFLDGWVIFVEYAKP----RQPPT 121
+G+ ++GW+I V+ AK RQPP+
Sbjct: 350 NGEIINGWMIVVDVAKTNLRNRQPPS 375
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Query: 7 VAAPRGLRRLFSTSPFSSSLNPPQRPQAEP-----STNLFVSGLSKRTTDETLRDTFSAF 61
+AA L L S F+SS++ P S LFV GLS T D +L++ FS+F
Sbjct: 1 MAAFNKLGSLLRQSAFASSVSAGSAPAMFNAARFMSNKLFVGGLSWGTNDGSLKEAFSSF 60
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
GEV A+++ RE+G S+GFGFV+++ E A KA MDG+ LDG + V +A R
Sbjct: 61 GEVYEARVITDRETGRSRGFGFVEFSNEEDAKKAASSMDGQELDGRSVRVNFANER 116
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 54/79 (68%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D L+ FS FGE++ AKI++ RE+G S+GFGFV +AT E+ AIEGM
Sbjct: 6 CFVGGLAWATDDHNLQSAFSNFGEILDAKIIQDRETGRSRGFGFVTFATEESMQAAIEGM 65
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
+GK LDG I V A+ R+
Sbjct: 66 NGKELDGRSITVNQAQSRR 84
>gi|118474079|ref|YP_892397.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|424821065|ref|ZP_18246103.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
gi|118413305|gb|ABK81725.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|342327844|gb|EGU24328.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
Length = 82
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V LS R T+ LR+ FS+FGEV AKIVK +E+ SKGFGFV+ ++ E A KAIEG
Sbjct: 3 NIYVGNLSYRMTESELREVFSSFGEVTRAKIVKDKETNRSKGFGFVEMSSDEQAKKAIEG 62
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
+GK + G + V A+PR
Sbjct: 63 TNGKEVGGRALRVNEARPRD 82
>gi|242055377|ref|XP_002456834.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
gi|241928809|gb|EES01954.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
Length = 147
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LFV GLS D LR+ FS FG+V A+++ R++G S+GFGFV Y + +AA AI
Sbjct: 36 STKLFVGGLSWGVDDMKLREAFSGFGDVTEARVITDRDTGKSRGFGFVNYTSSDAANAAI 95
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
GMDGK +DG + V A R
Sbjct: 96 SGMDGKEIDGRPVRVNIANDR 116
>gi|387861095|gb|AFK08577.1| glycine-rich RNA binding protein 2b [Camelina sativa]
gi|387861101|gb|AFK08580.1| glycine-rich RNA binding protein 2b [Camelina sativa]
Length = 156
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LFV GLS T D +LRD F+ FGEVV AK++ RE+G S+GFGFV ++ AA AI
Sbjct: 35 STKLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAI 94
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLP 123
MDGK L+G I V A R P+ P
Sbjct: 95 SEMDGKDLNGRNIRVNPANDR--PSAP 119
>gi|242046266|ref|XP_002461004.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
gi|241924381|gb|EER97525.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
Length = 83
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 57/79 (72%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST +FVS LS TT+E +D FS+FG V A++++ +++G KGFGFVKY++ A KA+
Sbjct: 5 STEIFVSRLSFYTTEEEFKDVFSSFGTVEEARLMRDQQTGRIKGFGFVKYSSQAEAEKAV 64
Query: 97 EGMDGKFLDGWVIFVEYAK 115
+ MDG+ L G +IFVE AK
Sbjct: 65 KAMDGRILRGRLIFVEMAK 83
>gi|116783558|gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 56/81 (69%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ +FV GLS D+TLR++F+ FG+V+ AKI+ RE+G S+GFGFV +A+ + A A+
Sbjct: 38 SSKVFVGGLSYGVDDQTLRESFATFGDVMEAKIINDRETGRSRGFGFVTFASPDEANAAV 97
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
E MDGK L G I V A+ R
Sbjct: 98 EAMDGKDLQGRSIRVNIAQER 118
>gi|357150983|ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 108
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 58/81 (71%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST +FVS LS TT+E L++ FS FG + A++++ ++G KGFGFVKY++ AA KA+
Sbjct: 25 STEIFVSKLSFYTTEEELKNIFSPFGAIEEARLMRDNQTGRPKGFGFVKYSSQVAAEKAV 84
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
+ MDG+ + G +IFVE AK R
Sbjct: 85 KAMDGRIIRGRIIFVETAKER 105
>gi|223973531|gb|ACN30953.1| unknown [Zea mays]
Length = 184
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LF+ GL D LR+ FS+FGEV A+++ RE+G S+GFGFV Y+ +AA +AI
Sbjct: 36 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 95
Query: 97 EGMDGKFLDGWVIFVEYAKPR-----QPPT 121
MDGK +DG + V A R PPT
Sbjct: 96 SAMDGKEIDGRQVRVNMANERPLRSTSPPT 125
>gi|449525960|ref|XP_004169984.1| PREDICTED: uncharacterized LOC101208465 [Cucumis sativus]
Length = 394
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF++GLS T+++TLR F FG++V KI+ + S SKG+ FV+Y T EAA A++ M
Sbjct: 308 LFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFVEYTTEEAASAALKEM 367
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK ++GW+I V+ AKP
Sbjct: 368 NGKIINGWMIVVDIAKP 384
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Query: 25 SLNPP---QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGF 81
S++ P Q ++ S LF+ G+S T + LR+ FS +G+V+ AKI+ R++G S+GF
Sbjct: 24 SMSTPSLFQAIRSMSSAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGF 83
Query: 82 GFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPP 120
GF+ +AT E A A++ MD K LDG + V YA R P
Sbjct: 84 GFITFATSEEASSALQAMDNKELDGRTVRVNYATERARP 122
>gi|449446458|ref|XP_004140988.1| PREDICTED: uncharacterized protein LOC101208465 [Cucumis sativus]
Length = 394
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF++GLS T+++TLR F FG++V KI+ + S SKG+ FV+Y T EAA A++ M
Sbjct: 308 LFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFVEYTTEEAASAALKEM 367
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK ++GW+I V+ AKP
Sbjct: 368 NGKIINGWMIVVDIAKP 384
>gi|18402803|ref|NP_566672.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20466724|gb|AAM20679.1| unknown protein [Arabidopsis thaliana]
gi|21536799|gb|AAM61131.1| unknown [Arabidopsis thaliana]
gi|25084257|gb|AAN72206.1| unknown protein [Arabidopsis thaliana]
gi|332642921|gb|AEE76442.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 374
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF++GLS T+++TLR F FGE+V KI+ + S SKG+ F++Y T EAAG A++ M
Sbjct: 284 LFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKEM 343
Query: 100 DGKFLDGWVIFVEYAKP---RQPPTLPS 124
+GK ++GW+I V+ AK RQ + PS
Sbjct: 344 NGKIINGWMIVVDVAKTKPFRQNRSQPS 371
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+RP+A P T +FV LS T + +L D FS FGEVV + ++K RE+G S+GFGFV +++
Sbjct: 3 RRPEAAPGTKVFVGNLSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSP 62
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
E+A A++ M+G+ L+G I V A R
Sbjct: 63 ESASAAVDAMNGQDLNGRNIRVNLANER 90
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 13 LRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKH 72
LRR + P S L P R + S+ LFV GLS T + TL+D FS FG V+ A+I+
Sbjct: 11 LRRTLA--PTCSPLLQPVRCMS--SSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIID 66
Query: 73 RESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
RESG S+GFGF+ + + E A A+ MDGK L G I V +A R
Sbjct: 67 RESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHANER 111
>gi|346226819|ref|ZP_08847961.1| RNP-1 like RNA-binding protein [Anaerophaga thermohalophila DSM
12881]
Length = 93
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 53/81 (65%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+FV+ LS RT E L FS FGEV+ AK++ RE+GYSK +GFV+ A + A AIE
Sbjct: 2 NIFVAKLSSRTKSEDLEQMFSEFGEVISAKVIMDRETGYSKRYGFVEMANDDEATAAIEN 61
Query: 99 MDGKFLDGWVIFVEYAKPRQP 119
+D K +DG I V+ A PR+
Sbjct: 62 LDDKEVDGSRIVVKKAHPREE 82
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 13 LRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKH 72
LRR + P S L P R + S+ LFV GLS T + TL+D FS FG V+ A+I+
Sbjct: 11 LRRTLA--PTCSPLLQPVRCMS--SSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIID 66
Query: 73 RESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
RESG S+GFGF+ + + E A A+ MDGK L G I V +A R
Sbjct: 67 RESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHANER 111
>gi|293336981|ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea mays]
gi|223975005|gb|ACN31690.1| unknown [Zea mays]
gi|414887554|tpg|DAA63568.1| TPA: hypothetical protein ZEAMMB73_633512 [Zea mays]
Length = 103
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 56/84 (66%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST +FVS LS TT+E +D FS FG V A++++ ++G KGFGFVKY++ A KA+
Sbjct: 20 STEIFVSRLSFYTTEEEFKDIFSPFGTVEEARLMRDHQTGRMKGFGFVKYSSQAEAEKAV 79
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPP 120
+ MDGK L G +IFVE AK +
Sbjct: 80 KAMDGKILRGRLIFVEMAKGHESK 103
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 57/83 (68%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ LFV GLS T D++L++ F++FG+VV AK++ R+SG S+GFGFV ++ + A +A+
Sbjct: 38 SSRLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAM 97
Query: 97 EGMDGKFLDGWVIFVEYAKPRQP 119
MDG+ L G I V A+ R P
Sbjct: 98 NAMDGQQLHGRNIRVNLAQERAP 120
>gi|194699346|gb|ACF83757.1| unknown [Zea mays]
gi|414587318|tpg|DAA37889.1| TPA: glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
Query: 6 AVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPST-NLFVSGLSKRTTDETLRDTFSAFGEV 64
A+AA R R ++ S++ P Q+ T LFV GLS+ T+ +L + FS +G+V
Sbjct: 2 AMAALRETSRCLASRGRSAAWRPVLLAQSRGITYKLFVGGLSQFATEASLAEAFSRYGQV 61
Query: 65 VHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
+ A +V+ + + KGFGFVK+A+ E A A E M+GK L+G VI+V+ AK RQ
Sbjct: 62 IEATVVRDKVTDVPKGFGFVKFASPEEANNAREEMNGKALNGRVIYVDIAKARQ 115
>gi|226510389|ref|NP_001150093.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195636652|gb|ACG37794.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
Query: 6 AVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPST-NLFVSGLSKRTTDETLRDTFSAFGEV 64
A+AA R R ++ S++ P Q+ T LFV GLS+ T+ +L + FS +G+V
Sbjct: 2 AMAALREASRCLASRGRSAAWRPVLLAQSRGITYKLFVGGLSQFATEASLAEAFSRYGQV 61
Query: 65 VHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
+ A +V+ + + KGFGFVK+A+ E A A E M+GK L+G VI+V+ AK RQ
Sbjct: 62 IEATVVRDKVTDVPKGFGFVKFASPEEANNAREEMNGKALNGRVIYVDIAKARQ 115
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 20 SPFSSSLNPP--QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
S FS S NP Q + S+ LF+ GLS T D +LR+ F +GEV+ A+++ RE+G
Sbjct: 21 SQFSVS-NPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGR 79
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
S+GFGFV + + E A AI+ +DG+ L G + V YA R
Sbjct: 80 SRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119
>gi|440577321|emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%)
Query: 32 PQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEA 91
P LF+ GLS RTT+E+LR F FG++ +V R + +GF F+ YA E
Sbjct: 110 PSLHAHVALFIEGLSFRTTEESLRSAFERFGQLTEVNLVMDRVAKRPRGFAFLSYANEEE 169
Query: 92 AGKAIEGMDGKFLDGWVIFVEYAK 115
+ A+EGM GKFLDG VIFVE AK
Sbjct: 170 SKNAMEGMHGKFLDGRVIFVEVAK 193
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ LFV GL+ TTD+ +++ FSAFGEV KI+ R++G S+GFGFV +AT + A A++
Sbjct: 42 SKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQ 101
Query: 98 GMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYGRQ 135
+DG+ L G I V YA + P S YGR+
Sbjct: 102 ALDGRDLAGRTIRVNYATKQSPQDRQSGGG---MYGRR 136
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ LFV GL+ TTD+ +++ FSAFGEV KI+ R++G S+GFGFV +AT + A A++
Sbjct: 42 SKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQ 101
Query: 98 GMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYGRQ 135
+DG+ L G I V YA + P S YGR+
Sbjct: 102 ALDGRDLAGRTIRVNYATKQSPQDRQSGGG---MYGRR 136
>gi|116781215|gb|ABK22008.1| unknown [Picea sitchensis]
Length = 140
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 59/101 (58%), Gaps = 11/101 (10%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
+T LFV GLS TT++ L + FS FGEVV K+V R S SKGFGFV+YA+ A +A
Sbjct: 31 TTKLFVGGLSFYTTEKALTEAFSRFGEVVEVKVVMDRVSQRSKGFGFVQYASEADAERAK 90
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ-----------PPTLPSQN 126
M+GK L G +IFV+ KP+ PP L S+
Sbjct: 91 AEMNGKVLSGRIIFVDTVKPKSQLSGDLPSATVPPVLSSKT 131
>gi|357119387|ref|XP_003561423.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 161
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ T D L+D FS+FGE++ +KI+ RE+G S+GFGFV +A+ ++
Sbjct: 2 AEVEYRCFVGGLAWATDDRGLQDAFSSFGEIIDSKIINDRETGRSRGFGFVTFASEQSMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIEGM+GK LDG I V A+
Sbjct: 62 DAIEGMNGKDLDGRNITVNEAQS 84
>gi|406944721|gb|EKD76419.1| hypothetical protein ACD_43C00118G0001 [uncultured bacterium]
Length = 84
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 58/82 (70%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
+TNLFV G++ ++TD+TLR+ F G VV AKI+ + +G S+GFGFV+ +T E A AI
Sbjct: 2 NTNLFVGGIAFKSTDDTLREAFMQAGNVVSAKIIMDKMTGRSRGFGFVEMSTPEEAQAAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+ DGK LDG I V+ A+PR+
Sbjct: 62 QMWDGKELDGRRIAVKEAQPRE 83
>gi|226505736|ref|NP_001150149.1| LOC100283778 [Zea mays]
gi|195605606|gb|ACG24633.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195606158|gb|ACG24909.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637130|gb|ACG38033.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195645710|gb|ACG42323.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|238009788|gb|ACR35929.1| unknown [Zea mays]
gi|413951537|gb|AFW84186.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LF+ GL D LR+ FS+FGEV A+++ RE+G S+GFGFV Y+ +AA +AI
Sbjct: 36 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 95
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
MDGK +DG + V A R
Sbjct: 96 SAMDGKEIDGRQVRVNMANER 116
>gi|116782406|gb|ABK22494.1| unknown [Picea sitchensis]
Length = 178
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 6/86 (6%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L+VSGLS TT+++LR+ FS+FG +V A IV R + S+GF F++YA E A AI+GM
Sbjct: 84 LYVSGLSYYTTEQSLRNAFSSFGNLVEATIVMDRVTKRSRGFAFLRYAYEEEAEAAIKGM 143
Query: 100 DGKFLDGWVIFVEYAKPRQPPTLPSQ 125
GKFLDG VIFVEY+K LPS+
Sbjct: 144 HGKFLDGRVIFVEYSK------LPSE 163
>gi|387861097|gb|AFK08578.1| glycine-rich RNA binding protein 2c [Camelina sativa]
gi|387861103|gb|AFK08581.1| glycine-rich RNA binding protein 2c [Camelina sativa]
Length = 158
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LFV GLS T D +LRD F+ FGEVV AK++ RE+G +GFGFV ++ AA AI
Sbjct: 35 STKLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRPRGFGFVNFSDETAASAAI 94
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLP 123
MDGK L+G I V A R P+ P
Sbjct: 95 SEMDGKDLNGRNIRVNPANDR--PSAP 119
>gi|187373099|gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ TTD+TL D FS +GE+V +KI+ RE+G S+GFGFV + +A
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGDAFSQYGEIVDSKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AIEGM+G+ LDG I V A+
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQ 83
>gi|388512303|gb|AFK44213.1| unknown [Medicago truncatula]
Length = 121
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
S+ LF+ GLS D++LRD F+ +G+VV A+++ RE+G S+GFGF+ + + E+A A
Sbjct: 9 SSSKLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFINFTSEESATSA 68
Query: 96 IEGMDGKFLDGWVIFVEYAKPRQP 119
+ MDG+ L+G I V YA RQ
Sbjct: 69 LS-MDGQDLNGRNIRVSYANDRQA 91
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 20 SPFSSSLNPP--QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
S FS S NP Q + S+ LF+ GLS T D +LR+ F +GEV+ A+++ RE+G
Sbjct: 21 SQFSVS-NPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFYKYGEVIEARVIVDRETGR 79
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
S+GFGFV + + E A AI+ +DG+ L G + V YA R
Sbjct: 80 SRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119
>gi|115481496|ref|NP_001064341.1| Os10g0321700 [Oryza sativa Japonica Group]
gi|110288867|gb|ABG66004.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113638950|dbj|BAF26255.1| Os10g0321700 [Oryza sativa Japonica Group]
Length = 317
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 13 LRRLFSTSPFSSSLNPP--QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIV 70
LR++ + S+ P Q + S+ LF+ G+S T D++L++ F+ +GEV+ A+++
Sbjct: 4 LRKVGNLVRQSAGSGSPLFQAVRCMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVI 63
Query: 71 KHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
R +G S+GFGFV Y + + A AI GMDGK L G ++ V YA
Sbjct: 64 VDRTTGRSRGFGFVTYTSTDEAAAAITGMDGKDLQGRIVRVSYA 107
>gi|38344030|emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group]
gi|38346331|emb|CAE02067.2| OJ000126_13.13 [Oryza sativa Japonica Group]
gi|116309334|emb|CAH66418.1| H0622F05.1 [Oryza sativa Indica Group]
gi|116309399|emb|CAH66476.1| OSIGBa0137L20.5 [Oryza sativa Indica Group]
Length = 137
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 58/85 (68%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GLS+ T+++L + FS +G+V+ A IV + + KGFGFVK+A+ EAA KA E M
Sbjct: 39 LFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEEM 98
Query: 100 DGKFLDGWVIFVEYAKPRQPPTLPS 124
+GK L+G VI+V+ AK + T S
Sbjct: 99 NGKVLNGRVIYVDIAKAKMNRTTDS 123
>gi|297830792|ref|XP_002883278.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329118|gb|EFH59537.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 376
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF++GLS T+++TLR F FGE+V KI+ + S SKG+ F++Y T EAA A++ M
Sbjct: 286 LFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAASAALKEM 345
Query: 100 DGKFLDGWVIFVEYAKPR 117
+GK ++GW+I V+ AK +
Sbjct: 346 NGKIINGWMIVVDVAKTK 363
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 20 SPFSSSLNPP--QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
S FS S NP Q + S+ LF+ GLS T D +LR+ F +GEV+ A+++ RE+G
Sbjct: 21 SQFSVS-NPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGR 79
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
S+GFGFV + + E A AI+ +DG+ L G + V YA R
Sbjct: 80 SRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119
>gi|195642478|gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 153
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LF+ GL D LR+ FS+FGEV A+++ RE+G S+GFGFV Y+ +AA +AI
Sbjct: 36 STKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAI 95
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
MDGK +DG + V A R
Sbjct: 96 SAMDGKEIDGRQVRVNMANER 116
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 55/82 (67%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
S+ +FV G+S T D++LR+ F+ +GEV+ A+++ RE+G S+GFGFV Y + E A A
Sbjct: 41 ESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSA 100
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
I+ +DG+ L G + V YA R
Sbjct: 101 IQALDGQDLHGRRVRVNYANDR 122
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 55/82 (67%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
S+ +FV G+S T D++LR+ F+ +GEV+ A+++ RE+G S+GFGFV Y + E A A
Sbjct: 41 ESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSA 100
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
I+ +DG+ L G + V YA R
Sbjct: 101 IQALDGQDLHGRRVRVNYANDR 122
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Query: 27 NPPQRPQ------AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKG 80
NP +R Q ++PST LFV LS TT++ L F FG+V H ++ +ESG KG
Sbjct: 192 NPEKRAQVFGDSESQPSTTLFVGNLSWNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKG 251
Query: 81 FGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKP 116
FG+V++ E A KA E M GK LDG + ++Y++P
Sbjct: 252 FGYVEFGDQEGATKAYEAMKGKDLDGRTLRLDYSQP 287
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A S +FV LS ++ L F G VV A++ R SG S+GF +V++++ A
Sbjct: 105 EAGESNTVFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEA 164
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPRQP 119
KA+E M+GK +DG + V+ ++PRQP
Sbjct: 165 QKAVEEMNGKQIDGREVNVDISQPRQP 191
>gi|2226370|gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 54/83 (65%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ TTD+TL D FS +GE++ +KI+ RE+G S+GFGFV + +A
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIEGM+G+ LDG I V A+
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQS 84
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Query: 25 SLNPP---QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGF 81
SL+ P Q + S+ LF+ G++ +++LR+ F+ +GEVV +++ RE+G S+GF
Sbjct: 24 SLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVETRVILDRETGRSRGF 83
Query: 82 GFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
GFV + + EAA AI+ +DG+ L G V+ V YA R
Sbjct: 84 GFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDR 119
>gi|30692256|ref|NP_849524.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661646|gb|AEE87046.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 92
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 54/84 (64%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
+E FV GL+ T DE L+ TFS FG+V+ +KI+ RESG S+GFGFV + +A
Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPR 117
AIE M+GK LDG VI V A+ R
Sbjct: 62 DAIEEMNGKELDGRVITVNEAQSR 85
>gi|115473215|ref|NP_001060206.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|113611742|dbj|BAF22120.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|222637411|gb|EEE67543.1| hypothetical protein OsJ_25023 [Oryza sativa Japonica Group]
Length = 238
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ LFV GLS T D TL+D FS +G+V+ A+I+ R++G SKG+GF+ Y + E A A+
Sbjct: 30 SSKLFVGGLSYATDDTTLKDVFSHYGDVLEARIIIDRDTGKSKGYGFITYTSSEEAAAAV 89
Query: 97 EGMDGKFLDGWVIFVEYAKP 116
MDGK L G ++ V A
Sbjct: 90 TAMDGKDLQGRIVRVSTAND 109
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q + S+ LFV G+S +T D +L++ F +G VV A+I+ RE+G S+GFGFV Y +
Sbjct: 32 QAMRCMSSSKLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSS 91
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
E A AI+ +DG+ L G + V YA R
Sbjct: 92 EEASSAIQALDGQDLHGRRVRVNYATER 119
>gi|326515712|dbj|BAK07102.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 104
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 58/86 (67%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T D++L++ FS +G+V+ +KI+ RE+G S+GFGFV +A+ EA
Sbjct: 2 ADVEYRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPRQP 119
+AIE M+G+ LDG I V A+ R+
Sbjct: 62 QAIEAMNGQDLDGRNITVNEAQSRRS 87
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia sempervirens]
Length = 194
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 53/84 (63%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ T D +L D FS FGEV+ +KIV RE+G S+GFGFV ++ +A
Sbjct: 4 AEIEFRCFVGGLAWATDDRSLHDAFSPFGEVLESKIVSDRETGRSRGFGFVTFSDEQAMM 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPR 117
AIE M+GK LDG I V A+ R
Sbjct: 64 DAIEAMNGKELDGRNITVNQAQSR 87
>gi|15231311|ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7630030|emb|CAB88326.1| RNA binding protein-like [Arabidopsis thaliana]
gi|46931202|gb|AAT06405.1| At3g46020 [Arabidopsis thaliana]
gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis thaliana]
gi|332644581|gb|AEE78102.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 102
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 55/79 (69%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S LFVS LS TTD++LR FS FG++ A++++ E+ KGFGF+ + + + A KA+
Sbjct: 6 SAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKAL 65
Query: 97 EGMDGKFLDGWVIFVEYAK 115
+ +DGK +DG +IFVE AK
Sbjct: 66 KSLDGKIVDGRLIFVEVAK 84
>gi|2826811|emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana]
Length = 150
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LF+ GLS T D +LRD F+ FG+VV AK++ RE+G S+GFGFV + AA AI
Sbjct: 34 STKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 93
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLP 123
MDGK L+G I V A R P+ P
Sbjct: 94 SEMDGKELNGRHIRVNPANDR--PSAP 118
>gi|211906474|gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 54/86 (62%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T D L + FSAFGE+V +KI+ RE+G S+GFGFV + +A
Sbjct: 4 ADVEFRCFVGGLAWATDDRALEEAFSAFGEIVESKIINDRETGRSRGFGFVTFRDEKAMR 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPRQP 119
AIEGM+G+ LDG I V A+ R+
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQSRRS 89
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Query: 25 SLNPP---QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGF 81
SL+ P Q + S+ LF+ G++ +++LR+ F+ +GEVV +++ RE+G S+GF
Sbjct: 24 SLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGF 83
Query: 82 GFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
GFV + + EAA AI+ +DG+ L G V+ V YA R
Sbjct: 84 GFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDR 119
>gi|2624326|emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 53/80 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L FS FGE++ +KI+ RE+G S+GFGFV +++ +A AIEGM
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKPRQP 119
+GK LDG I V A+ R+
Sbjct: 70 NGKELDGRNITVNEAQSRRS 89
>gi|115489714|ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 53/80 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L FS FGE++ +KI+ RE+G S+GFGFV +++ +A AIEGM
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKPRQP 119
+GK LDG I V A+ R+
Sbjct: 70 NGKELDGRNITVNEAQSRRS 89
>gi|30682622|ref|NP_849377.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657934|gb|AEE83334.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 153
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LF+ GLS T D +LRD F+ FG+VV AK++ RE+G S+GFGFV + AA AI
Sbjct: 34 STKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 93
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLP 123
MDGK L+G I V A R P+ P
Sbjct: 94 SEMDGKELNGRHIRVNPANDR--PSAP 118
>gi|15236359|ref|NP_193121.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|25090505|sp|Q9SVM8.1|GRP2_ARATH RecName: Full=Glycine-rich RNA-binding protein 2, mitochondrial;
Short=AtGRP2; Flags: Precursor
gi|4455314|emb|CAB36849.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|7268089|emb|CAB78427.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|18252853|gb|AAL62353.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|21553749|gb|AAM62842.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|25084267|gb|AAN72208.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|332657933|gb|AEE83333.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 158
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LF+ GLS T D +LRD F+ FG+VV AK++ RE+G S+GFGFV + AA AI
Sbjct: 34 STKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 93
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLP 123
MDGK L+G I V A R P+ P
Sbjct: 94 SEMDGKELNGRHIRVNPANDR--PSAP 118
>gi|145333039|ref|NP_001078385.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657935|gb|AEE83335.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 144
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LF+ GLS T D +LRD F+ FG+VV AK++ RE+G S+GFGFV + AA AI
Sbjct: 34 STKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 93
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLP 123
MDGK L+G I V A R P+ P
Sbjct: 94 SEMDGKELNGRHIRVNPANDR--PSAP 118
>gi|75319742|sp|Q43472.1|GRP_HORVU RecName: Full=Glycine-rich RNA-binding protein blt801; AltName:
Full=Low temperature-responsive RNA-binding protein
gi|1229138|gb|AAB07749.1| low temperature-responsive RNA-binding protein [Hordeum vulgare
subsp. vulgare]
Length = 161
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 57/87 (65%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL T D++L++ FS +G+V+ +KI+ RE+G S+GFGFV +A+ EA
Sbjct: 2 ADVEYRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPRQPP 120
+AIE M+G+ LDG I V A+ R+
Sbjct: 62 QAIEAMNGQDLDGRNITVNEAQSRRSD 88
>gi|111162637|gb|ABH07505.1| glycine-rich RNA-binding protein [Nicotiana attenuata]
Length = 152
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 53/83 (63%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ TTD+TL D FS FGE++ +KI+ RE+G S+GFGFV + +A
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGDAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIEGM G+ LDG I V A+
Sbjct: 62 DAIEGMKGQDLDGRNITVNEAQS 84
>gi|469071|dbj|BAA03742.1| RNA-binding glycine-rich protein-1b [Nicotiana sylvestris]
gi|295393565|gb|ADG03638.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 148
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 53/84 (63%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE + FV GL+ TTD TL D F +GEV+ +KI+ RE+G S+GFGFV + +
Sbjct: 2 AEVEYSCFVGGLAWATTDRTLADAFGTYGEVLDSKIINDRETGRSRGFGFVTFKDEKCMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPR 117
AIEGM+G+ LDG I V A+ R
Sbjct: 62 DAIEGMNGQELDGRSITVNEAQAR 85
>gi|297819134|ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
gi|297323288|gb|EFH53709.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
Length = 102
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 57/85 (67%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S LFVS LS TTD++LR FS FG++ A++++ E+ KGFGF+ + + + A KA+
Sbjct: 6 SAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFESEDDARKAL 65
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPT 121
+ +DGK ++G +IFVE AK + T
Sbjct: 66 KSLDGKIVEGRLIFVEVAKSSEEVT 90
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
++ + N+FV LS DE L+ F A GEVV A + R++G SKGFG+V ++T EAA
Sbjct: 386 NSDANCNIFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAA 445
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPRQP 119
KAI M+GK +DG + V A P+ P
Sbjct: 446 EKAIAEMNGKEIDGRAVNVNAATPKTP 472
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV +S ++ L +TF G++V ++ RE+G KGFG+V++ ++E A A +
Sbjct: 492 LFVGNVSFNANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSAFNAL 551
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
+GK + G I +++++PR
Sbjct: 552 NGKDIAGRNIRLDFSQPRD 570
>gi|340383337|ref|XP_003390174.1| PREDICTED: ELAV-like protein 3-like [Amphimedon queenslandica]
Length = 392
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 27 NP-PQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVK 85
NP PQ P+ + TNL V+ L + T+E L+ FS FG V+ K++K + SG S G+GFV
Sbjct: 12 NPGPQNPETKAKTNLIVNYLPQTLTEEGLKQLFSQFGVVLSCKLIKDKSSGISLGYGFVN 71
Query: 86 YATLEAAGKAIEGMDGKFLDGWVIFVEYAKP 116
Y + E A AI+ M+G L+ + V YA+P
Sbjct: 72 YGSAEEAEHAIQKMNGTTLESKTLKVSYARP 102
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+ A G+ L + +P + +PS +FV L + D L FS F
Sbjct: 276 AMAALTGMTTGVPNLANLAPVAGGNGSTMTSPGDPSYCVFVYNLPETCQDFLLYQLFSPF 335
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
G + +++ +SG K +GFV + E A AI ++G DG + V + ++
Sbjct: 336 GAITSVNVIRDLKSGLCKRYGFVNMKSYEDACSAIMTLNGYVHDGKTLQVSFKNQKK 392
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V+ L + + L F +G ++ +K++ ++G +G GFV++ A AI
Sbjct: 111 NVYVANLPPQLSLTELDALFQPYGTIITSKVLTDEDTGAGRGVGFVRFDKYTQAEVAIAA 170
Query: 99 MDGKFLDGWV--IFVEYAKP 116
++GK L G + V++A P
Sbjct: 171 LNGKQLVGGTQPLLVKFANP 190
>gi|293332827|ref|NP_001169335.1| uncharacterized protein LOC100383202 [Zea mays]
gi|224028769|gb|ACN33460.1| unknown [Zea mays]
gi|413918115|gb|AFW58047.1| hypothetical protein ZEAMMB73_457780 [Zea mays]
Length = 714
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L D+ L FS FG++V AK++K R +G SKG+GFVKY+ + A AI
Sbjct: 420 TNLYIGYLPPTMDDDGLVSLFSQFGDIVMAKVIKDRNTGQSKGYGFVKYSDVSEANAAIA 479
Query: 98 GMDGKFLDGWVIFVEYA-KPRQ-------PPTLPSQNNTNFQYGRQ 135
M+G L+G VI V A KP Q PP+ P + T+ Y Q
Sbjct: 480 AMNGHHLEGRVIAVRVAGKPPQPAPAVSAPPSYPPTDPTSGGYSSQ 525
>gi|414878515|tpg|DAA55646.1| TPA: hypothetical protein ZEAMMB73_431003 [Zea mays]
Length = 113
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NLFV GLS T + L+D FS G+V+ AK++ H SG SKGFGFVK+++ A A++
Sbjct: 34 NLFVGGLSYDTNETALKDVFSQCGDVIAAKVICHPTSGKSKGFGFVKFSSQNQADAALQK 93
Query: 99 MDGKFLDGWVIFVEYA 114
M+G+ LDG I V YA
Sbjct: 94 MNGQVLDGRKIRVHYA 109
>gi|90704785|dbj|BAE92287.1| putative glycine-rich RNA binding protein [Cryptomeria japonica]
Length = 181
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 54/85 (63%)
Query: 32 PQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEA 91
A+ FV GLS T D +L+D F+AFGEV+ +K+V RE+G S+GFGFV + ++
Sbjct: 2 ASADVEFRCFVGGLSWSTDDRSLKDAFTAFGEVMDSKVVSDRETGRSRGFGFVTFMDEQS 61
Query: 92 AGKAIEGMDGKFLDGWVIFVEYAKP 116
AIEGM+G+ LDG I V A+
Sbjct: 62 MRDAIEGMNGRDLDGRNITVNRAQA 86
>gi|297806641|ref|XP_002871204.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
gi|297317041|gb|EFH47463.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
Length = 144
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
++ LFV GLS TT++ L + FS G+VV A+IV R S SKGFGFV +A+++ A KA+
Sbjct: 33 ASKLFVGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASVDEAQKAL 92
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+G+ +G VIFV+YAK +Q
Sbjct: 93 MEFNGQQFNGRVIFVDYAKAKQ 114
>gi|298528813|ref|ZP_07016217.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298512465|gb|EFI36367.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL+V LS TT+ LRD+F+ FGEV AKI++ RE+G S+GFGFV+ A +A+E
Sbjct: 2 TNLYVGNLSWNTTETQLRDSFAEFGEVSSAKIIEDRETGRSRGFGFVEMEN--GADEAVE 59
Query: 98 GMDGKFLDGWVIFVEYAKPRQPP 120
++GK DG I V AKP++
Sbjct: 60 KLNGKDFDGRTIKVNVAKPKRES 82
>gi|829254|emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 139
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LF+ GLS T D +LRD F+ FG+VV AK++ RE+G S+GFGFV + AA AI
Sbjct: 15 STKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 74
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLP 123
MDGK L+G I V A R P+ P
Sbjct: 75 SEMDGKELNGRHIRVNPANDR--PSAP 99
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ T D L+ FS +GE++ AKI+ RE+G S+GFGFV + + E+
Sbjct: 2 AETEYRCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPRQP 119
+AIE M+GK LDG I V A+ R+
Sbjct: 62 QAIEEMNGKELDGRNITVNEAQSRRS 87
>gi|108863012|gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
Length = 117
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L FS FGE++ +KI+ RE+G S+GFGFV +++ +A AIEGM
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
+GK LDG I V A+ R+
Sbjct: 70 NGKELDGRNITVNEAQSRR 88
>gi|15239958|ref|NP_196239.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|9759319|dbj|BAB09686.1| unnamed protein product [Arabidopsis thaliana]
gi|17065276|gb|AAL32792.1| Unknown protein [Arabidopsis thaliana]
gi|20260002|gb|AAM13348.1| unknown protein [Arabidopsis thaliana]
gi|21593170|gb|AAM65119.1| unknown [Arabidopsis thaliana]
gi|332003601|gb|AED90984.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 146
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 67/113 (59%)
Query: 6 AVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVV 65
A A G R L S +SS + + ++ LF+ GLS TT++ L + FS G+VV
Sbjct: 2 AALARIGGRHLKSVCLINSSASCFFTQRRGVASKLFIGGLSFCTTEQGLSEAFSKCGQVV 61
Query: 66 HAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
A+IV R S SKGFGFV +A+ + A KA+ +G+ L+G IFV+YAK +Q
Sbjct: 62 EAQIVMDRVSDRSKGFGFVTFASADEAQKALMEFNGQQLNGRTIFVDYAKAKQ 114
>gi|255535545|ref|YP_003095916.1| RNA-binding protein [Flavobacteriaceae bacterium 3519-10]
gi|255341741|gb|ACU07854.1| RNA-binding protein [Flavobacteriaceae bacterium 3519-10]
Length = 122
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+FVS ++ T +E+L+D FS FGEV AKI+ RE+G S+GFGFV+ + E AIE
Sbjct: 3 NIFVSNINYSTREESLQDLFSEFGEVSSAKIITDRETGRSRGFGFVEMSD-EDGKNAIEA 61
Query: 99 MDGKFLDGWVIFVEYAKPRQP 119
++GK LDG + V AKPR+
Sbjct: 62 LNGKELDGKELNVSEAKPRED 82
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Query: 23 SSSLNPP--QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKG 80
++S NP Q + S+ LFV GLS T + +LRD FS +GE++ AKI+ R++G S+G
Sbjct: 14 ATSSNPTLYQAIRCMSSSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRG 73
Query: 81 FGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
FGF+ YA E A AI +DGK L G + V A R
Sbjct: 74 FGFITYAAEEQASSAIMALDGKDLHGRNLRVSAATER 110
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NLFV GLS D+ L+ F FGEV+ A+++ R + SKGFG+V +A+ E A KA+E
Sbjct: 402 NLFVGGLSWNVDDDWLKKEFEKFGEVISARVITERGTERSKGFGYVDFASPEDARKAVEA 461
Query: 99 MDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNF 130
M G +DG I V+++ P+ P P Q +F
Sbjct: 462 MAGTEIDGRTINVDFSAPK--PERPPQEKRSF 491
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 13/104 (12%)
Query: 29 PQRPQAE-----------PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
P+RP E P+T LF+ L T +++ + FS +G++ ++ E+
Sbjct: 481 PERPPQEKRSFGQEELSAPTTTLFIGNLPFSATQDSVYEAFSEYGDINSVRLPTDPETER 540
Query: 78 SKGFGFVKYATLEAAGKAIE--GMDGKFLDGWVIFVEYAKPRQP 119
KGFG+V++AT EAA A+ DG ++D ++Y++PR P
Sbjct: 541 IKGFGYVEFATQEAATAAVNVGRGDGIYIDQRQARLDYSQPRAP 584
>gi|294461052|gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV GLS T ++ LRD FS +GE++ +++ +R SG SKGFGFV++A+ A A++ M
Sbjct: 37 LFVGGLSFDTNEKVLRDAFSLYGEILEVRVIINRASGLSKGFGFVQFASETDAVNALKEM 96
Query: 100 DGKFLDGWVIFVEYAKPR 117
DG+ LDG I V +A R
Sbjct: 97 DGQSLDGRNIRVNFANTR 114
>gi|409197759|ref|ZP_11226422.1| RNP-1 like RNA-binding protein [Marinilabilia salmonicolor JCM
21150]
Length = 121
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 50/80 (62%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+FV+ LS RT E L F FGEV AK++ RE+GYSK FGFV+ AA AIE
Sbjct: 27 NIFVAKLSSRTKSEDLEQMFGEFGEVTSAKVIMDRETGYSKRFGFVEMPDDSAANAAIEN 86
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
+D K DG I V+ A+PR+
Sbjct: 87 LDDKEFDGSHIVVKKARPRE 106
>gi|145333041|ref|NP_001078386.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657936|gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 129
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 52/81 (64%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LF+ GLS T D +LRD F+ FG+VV AK++ RE+G S+GFGFV + AA AI
Sbjct: 34 STKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 93
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
MDGK L+G I V A R
Sbjct: 94 SEMDGKELNGRHIRVNPANDR 114
>gi|449507141|ref|XP_004162944.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Cucumis
sativus]
Length = 175
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%), Gaps = 5/82 (6%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
PST L++SGLS RTT+E+LR+ F +FG++V +V R + +GF F++YA+ E + KA
Sbjct: 87 PSTRLYISGLSFRTTEESLRNAFKSFGQLVEVNLVMDRLANRPRGFAFLRYASEEESQKA 146
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
IEGM GK FVE AK R
Sbjct: 147 IEGMHGK-----GDFVEVAKSR 163
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ LFV GLS T D +L+ F++FGEV A ++ RE+G S+GFGFV ++ ++A AI
Sbjct: 34 SSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAI 93
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
+ MDGK L+G I V A R
Sbjct: 94 KEMDGKELNGRQIRVNLATER 114
>gi|449486948|ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%)
Query: 24 SSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGF 83
S+L+ Q + S+ +FV GLS T D+ L + F+ +GEVV A+++ R++G S+GFGF
Sbjct: 26 SNLSVFQTLRFMSSSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGF 85
Query: 84 VKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V + E A AI+ +DG+ LDG I YA R
Sbjct: 86 VTFGASEDASSAIQALDGQDLDGRRIRCSYATDR 119
>gi|449439323|ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%)
Query: 24 SSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGF 83
S+L+ Q + S+ +FV GLS T D+ L + F+ +GEVV A+++ R++G S+GFGF
Sbjct: 26 SNLSVFQTLRFMSSSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGF 85
Query: 84 VKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V + E A AI+ +DG+ LDG I YA R
Sbjct: 86 VTFGASEDASSAIQALDGQDLDGRRIRCSYATDR 119
>gi|469070|dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
gi|295393563|gb|ADG03637.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 156
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ TTD+TL + FS FGE++ +KI+ RE+G S+GFGFV + +A
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AIEGM+G+ LDG I V A+
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQ 83
>gi|30692254|ref|NP_849523.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661645|gb|AEE87045.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 126
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 53/82 (64%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
+E FV GL+ T DE L+ TFS FG+V+ +KI+ RESG S+GFGFV + +A
Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AIE M+GK LDG VI V A+
Sbjct: 62 DAIEEMNGKELDGRVITVNEAQ 83
>gi|15235002|ref|NP_195637.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|544425|sp|Q03251.1|GRP8_ARATH RecName: Full=Glycine-rich RNA-binding protein 8; AltName:
Full=Protein CCR1
gi|16305|emb|CAA78712.1| glycine rich protein [Arabidopsis thaliana]
gi|166658|gb|AAA20201.1| ORF [Arabidopsis thaliana]
gi|166839|gb|AAA32854.1| RNA-binding protein [Arabidopsis thaliana]
gi|4914438|emb|CAB43641.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|7270909|emb|CAB80589.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|222423067|dbj|BAH19515.1| AT4G39260 [Arabidopsis thaliana]
gi|332661644|gb|AEE87044.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 169
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 53/82 (64%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
+E FV GL+ T DE L+ TFS FG+V+ +KI+ RESG S+GFGFV + +A
Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AIE M+GK LDG VI V A+
Sbjct: 62 DAIEEMNGKELDGRVITVNEAQ 83
>gi|242073000|ref|XP_002446436.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
gi|241937619|gb|EES10764.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
Length = 135
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 55/78 (70%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV GLS+ T+E+L + FS +G+V+ A +V+ + + KGFGFVK+A+ E A A E M
Sbjct: 37 LFVGGLSQFATEESLAEAFSRYGQVIEATVVRDKVTDIPKGFGFVKFASPEEANNAREEM 96
Query: 100 DGKFLDGWVIFVEYAKPR 117
+GK L+G VI+V+ AK +
Sbjct: 97 NGKALNGRVIYVDIAKAK 114
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ LFV GLS T D +L+ F++FGEV A ++ RE+G S+GFGFV ++ ++A AI
Sbjct: 34 SSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAI 93
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPP 120
+ MDGK L+G I V A R
Sbjct: 94 KEMDGKELNGRQIRVNLATERSSA 117
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ TTD TL + FS +GEVV +KI+ RE+G S+GFGFV + +A AIEGM
Sbjct: 8 CFVGGLAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEGM 67
Query: 100 DGKFLDGWVIFVEYAKP 116
+G+ LDG I V A+
Sbjct: 68 NGQDLDGRNITVNEAQS 84
>gi|297793541|ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310490|gb|EFH40914.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 95
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 59/84 (70%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
+T LFVS LS TTD++LR F+ FG+++ A++++ +++ KGFGF+ + + + A A+
Sbjct: 6 TTQLFVSRLSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESEDDAQNAL 65
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPP 120
+ ++GK ++G +IFVE AK + P
Sbjct: 66 KALNGKIVNGRLIFVEAAKEVEAP 89
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ T D L+ FS +GE++ AKI+ RE+G S+GFGFV + + E+
Sbjct: 2 AETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPRQP 119
+AIE M+GK LDG I V A+ R+
Sbjct: 62 QAIEEMNGKELDGRSITVNEAQSRRS 87
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L FS +GE++ +KI+ RE+G S+GFGFV +++ +A AIEGM
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKPRQP 119
+GK LDG I V A+ R+
Sbjct: 70 NGKELDGRNITVNEAQSRRS 89
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L FS +GE++ +KI+ RE+G S+GFGFV +++ +A AIEGM
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKPRQP 119
+GK LDG I V A+ R+
Sbjct: 70 NGKELDGRNITVNEAQSRRS 89
>gi|421976742|gb|AFX73254.1| glycine rich RNA binding protein 1a [Solanum lycopersicum]
Length = 164
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 53/83 (63%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE + FV GL+ TTD TL D FS +GEVV +KI+ RE+G S+GFGFV + ++
Sbjct: 3 AEVEYSCFVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMK 62
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AI GM+G+ LDG I V A+
Sbjct: 63 DAISGMNGQELDGRNITVNEAQA 85
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S ++V LS TTD+TLR FS FG VV + +++ R++G S+GFGFV Y++ + A AI
Sbjct: 3 SAKIYVGNLSWNTTDDTLRQAFSTFGNVVDSVVMRDRDTGRSRGFGFVTYSSTQEAESAI 62
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
G++ + LDG I V A PR
Sbjct: 63 SGLNDQDLDGRRIKVNIANPR 83
>gi|799015|emb|CAA89058.1| putative glycine rich RNA binding protein [Solanum tuberosum]
Length = 175
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 53/84 (63%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ TTD+TL D FS + EVV +KI+ RE+G S+GFGFV + +A
Sbjct: 2 ADVEYRCFVGGLAWATTDQTLSDAFSQYAEVVESKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPR 117
AIEGM+ + LDG I V A+ R
Sbjct: 62 DAIEGMNRQDLDGRNITVNEAQSR 85
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q + S+ +F+ G+S +T D L++ F +G VV A+I+ R++G S+GFGFV Y +
Sbjct: 32 QALRCMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSS 91
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
E A AI+ MDG+ L G + V YA R
Sbjct: 92 EEASSAIQAMDGQDLHGRRVRVNYATER 119
>gi|224104887|ref|XP_002313606.1| predicted protein [Populus trichocarpa]
gi|222850014|gb|EEE87561.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 10/100 (10%)
Query: 24 SSLNPPQRPQAEP----------STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHR 73
SSL +PQ P S +FV GLS +T++ + + FS FGEV+ AKIV +
Sbjct: 10 SSLKVFSQPQLYPQPLLFFSKGFSAKVFVKGLSFSSTEKKIAEAFSEFGEVIEAKIVMDK 69
Query: 74 ESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEY 113
KG+GFV +A +AA KA EGM+GK LDG I+V +
Sbjct: 70 ARKRPKGYGFVTFAKKDAAEKACEGMNGKLLDGRAIYVRF 109
>gi|1934994|emb|CAA73034.1| SGRP-1 [Solanum commersonii]
Length = 162
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 53/83 (63%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE + FV GL+ TTD TL D FS +GEVV +KI+ RE+G S+GFGFV + ++
Sbjct: 3 AEVEYSCFVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMK 62
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
+AI GM+G LDG I V A+
Sbjct: 63 EAISGMNGSELDGRNITVNEAQA 85
>gi|118489085|gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 171
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ TTD+ L++ FS +GE++ +KI+ RE+G S+GFGFV + +A
Sbjct: 3 AEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMR 62
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AI+GM+G+ LDG I V A+
Sbjct: 63 DAIDGMNGQDLDGRNITVNEAQS 85
>gi|118481677|gb|ABK92779.1| unknown [Populus trichocarpa]
gi|118481702|gb|ABK92791.1| unknown [Populus trichocarpa]
gi|118482754|gb|ABK93295.1| unknown [Populus trichocarpa]
gi|118483202|gb|ABK93505.1| unknown [Populus trichocarpa]
Length = 170
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ TTD+ L++ FS +GE++ +KI+ RE+G S+GFGFV + +A
Sbjct: 3 AEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMR 62
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AI+GM+G+ LDG I V A+
Sbjct: 63 DAIDGMNGQDLDGRNITVNEAQS 85
>gi|9757907|dbj|BAB08354.1| unnamed protein product [Arabidopsis thaliana]
Length = 112
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 63/92 (68%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+N ++GLS TTD++LR F+ FG++ ++++K +++ KGFGF+ + + + A KA++
Sbjct: 21 SNCSLAGLSAYTTDQSLRQLFAPFGQITESRLIKDQQTQRPKGFGFITFESEDDAQKALK 80
Query: 98 GMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTN 129
++GK ++G +IFVE AK + PT ++N +
Sbjct: 81 ALNGKIVNGRLIFVETAKEVEAPTTSLKSNKD 112
>gi|222612603|gb|EEE50735.1| hypothetical protein OsJ_31052 [Oryza sativa Japonica Group]
Length = 118
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q + S+ LF+ G+S T D++L++ F+ +GEV+ A+++ R +G S+GFGFV Y +
Sbjct: 23 QAVRCMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTST 82
Query: 90 EAAGKAIEGMDGKFLD----GW 107
+ A AI GMDGK +D GW
Sbjct: 83 DEAAAAITGMDGKVMDESLSGW 104
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q ++ S+ LFV GLS T + +L++TFS +GEV+ A+++ RE+G S+GFGF+ + +
Sbjct: 32 QTIRSMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSS 91
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
E A A++ MDG+ L G I V YA ++
Sbjct: 92 EEATSAMQAMDGQDLHGRRIKVNYATEKR 120
>gi|224105391|ref|XP_002313795.1| predicted protein [Populus trichocarpa]
gi|222850203|gb|EEE87750.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ TTD+ L++ FS +GE++ +KI+ RE+G S+GFGFV + +A
Sbjct: 2 AEVEYRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AI+GM+G+ LDG I V A+
Sbjct: 62 DAIDGMNGQDLDGRNITVNEAQS 84
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ T D L+ FS +GE++ AKI+ RE+G S+GFGFV + + E+
Sbjct: 2 AETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPRQPP 120
+AIE M+GK LDG + V A+ R+
Sbjct: 62 QAIEEMNGKELDGRQVTVNEAQSRRSA 88
>gi|444510365|gb|ELV09582.1| Nucleolin [Tupaia chinensis]
Length = 679
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AEPS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 401 AEPSKTLFVKGLSEDTTEETLKESFDGS---VRARIVTDRETGSSKGFGFVDFNSEEDAK 457
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 458 AAKEAMEDGEIDGNKVTLDWAKPK 481
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 53/82 (64%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
S+ +FV G+S +T D +LR+ F +GEV+ A+++ RE+G S+GF FV Y + E A A
Sbjct: 38 SSSKVFVGGISYQTDDTSLREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSA 97
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
I+ +DG+ L G + V YA R
Sbjct: 98 IQALDGQDLHGRRVRVNYANDR 119
>gi|301310455|ref|ZP_07216394.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
20_3]
gi|423336704|ref|ZP_17314451.1| hypothetical protein HMPREF1059_00403 [Parabacteroides distasonis
CL09T03C24]
gi|300832029|gb|EFK62660.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
20_3]
gi|409240584|gb|EKN33362.1| hypothetical protein HMPREF1059_00403 [Parabacteroides distasonis
CL09T03C24]
Length = 123
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NL++S LS +DE LR F+ +GE+ AK++ RE+G S+GFGFV+ + E A KAIE
Sbjct: 2 NLYISNLSYNISDEDLRQLFADYGEITSAKVIMDRETGRSRGFGFVELSDDELAKKAIEE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQP 119
++ DG VI + A+PR+
Sbjct: 62 LNQASYDGKVINITEARPRED 82
>gi|224077836|ref|XP_002305429.1| predicted protein [Populus trichocarpa]
gi|118481826|gb|ABK92850.1| unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 55/82 (67%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ TTD++L++ FS +GE++ +KI+ RE+G S+GFGFV + +A
Sbjct: 3 AEVEYRCFVGGLAWATTDQSLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNEKAMR 62
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AI+GM+G+ LDG I V A+
Sbjct: 63 DAIDGMNGQDLDGRNITVNEAQ 84
>gi|18103931|emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa Indica Group]
Length = 194
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L FS +GE++ +KI+ RE+G S+GFGFV +++ +A AIEGM
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
+GK LDG I V A+ R+
Sbjct: 70 NGKELDGRNITVNEAQSRR 88
>gi|90265701|dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D++L FS FGE+ KI+ RE+G S+GFGFV +++ E+ AIEGM
Sbjct: 7 CFVGGLAWATNDQSLEQAFSQFGEITDCKIINDRETGRSRGFGFVTFSSSESMKNAIEGM 66
Query: 100 DGKFLDGWVIFVEYAK 115
+G+ LDG I V A+
Sbjct: 67 NGQDLDGRNITVNEAQ 82
>gi|323650232|gb|ADX97202.1| cold-inducible RNA-binding protein [Perca flavescens]
Length = 80
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GLS TT+E+L F FG + ++K R++GYS+GFGFVKY E A A+EGM
Sbjct: 4 LFIGGLSFDTTEESLAAAFGKFGTIEKVDVIKDRDTGYSRGFGFVKYENSEDAKDAMEGM 63
Query: 100 DGKFLDGWVIFVEYA 114
+GK LDG I V+ A
Sbjct: 64 NGKTLDGRAIRVDEA 78
>gi|395823283|ref|XP_003803977.1| PREDICTED: LOW QUALITY PROTEIN: nucleolin [Otolemur garnettii]
Length = 700
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + APRG SP + S +PS LFV GLS+ TT+ETL+++F
Sbjct: 546 AIRLELQAPRG-------SPNARS---------QPSKTLFVKGLSEDTTEETLKESFDG- 588
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 589 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 642
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVK--HRESGYSKGFGFVKYATLEAAGK 94
S L +S LS T+ETL++ F A +K ++G SKG+ F+++A+ E A +
Sbjct: 479 SKTLVLSNLSYSATEETLQEVFE------KATFIKVPQNQNGKSKGYAFIEFASFEDAKE 532
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQ 125
A+ + + ++G I +E PR P SQ
Sbjct: 533 ALNSCNKREIEGRAIRLELQAPRGSPNARSQ 563
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+ E +TN+FV LS ++ L+ F + GEVV A++V R+S S+GFG+V++A LEA+
Sbjct: 189 EEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLEAS 248
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPRQP 119
KAIE DG +DG I V YA R+P
Sbjct: 249 AKAIE-KDGSEIDGRAIRVNYATQRKP 274
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 53/86 (61%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
Q+ P+ L++ LS T++ + + F G+V ++ R++G KGFG+V+++++E A
Sbjct: 289 QSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDA 348
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPRQ 118
A++ M+G + G I V++A P+Q
Sbjct: 349 SAALKAMNGAEIAGRAIRVDFAPPKQ 374
>gi|255568010|ref|XP_002524982.1| RNA binding protein, putative [Ricinus communis]
gi|223535726|gb|EEF37389.1| RNA binding protein, putative [Ricinus communis]
Length = 371
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 53/83 (63%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S N GLS T+++TLR F FGE+V KI+ + S SKG+ F++Y T EAA A+
Sbjct: 278 SENKDYEGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAANAAL 337
Query: 97 EGMDGKFLDGWVIFVEYAKPRQP 119
+ M+GK ++GW+I V+ AK P
Sbjct: 338 KEMNGKIINGWMIVVDVAKTSPP 360
>gi|371777269|ref|ZP_09483591.1| RNP-1 like RNA-binding protein [Anaerophaga sp. HS1]
Length = 92
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+FV+ LS RT E L FS FGEV AK++ R +GYSK FGFV+ + A AI+
Sbjct: 2 NIFVAKLSARTKSEDLEQLFSEFGEVSSAKVIMDRATGYSKRFGFVEMPNDDEAQTAIDN 61
Query: 99 MDGKFLDGWVIFVEYAKPRQPPTLPSQNN 127
+D K DG I V+ A+PR+ + S N
Sbjct: 62 LDDKEFDGSRIVVKKARPREEVSGRSDRN 90
>gi|5929884|gb|AAD56625.1|AF151373_1 nucleolin-related protein NRP [Rattus norvegicus]
Length = 715
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETLR++F
Sbjct: 557 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLRESFDG- 599
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 600 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 653
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 52/83 (62%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ T + L FS FGE+V +K++ RE+G S+GFGFV +AT +A
Sbjct: 4 AEVEFRCFVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAMR 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIEGM+G+ LDG I V A+
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQS 86
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum CS3096]
Length = 128
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L+V LS TTD+TLR TFS FGEV + I++ RE+G ++GFGFV ++T E A A++ +
Sbjct: 4 LYVGNLSWNTTDDTLRQTFSEFGEVTDSIIMRDRETGRARGFGFVTFSTEEQANAAVDAL 63
Query: 100 DGKFLDGWVIFVEYAKPR 117
+ + LDG I V A R
Sbjct: 64 NEQELDGRRIRVNVANAR 81
>gi|148927167|ref|ZP_01810792.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
gi|147887382|gb|EDK72831.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
Length = 108
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S LF+ L+ TTD++LR F+ GEV AK+V R+SG SKGFGFV Y E A AI
Sbjct: 2 SKKLFIGSLAYATTDDSLRAHFAEKGEVEEAKVVTDRDSGRSKGFGFVTYVNDEDADTAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+ +D LDG I V A+PR+
Sbjct: 62 KELDNSELDGRNIHVNEARPRE 83
>gi|395007942|ref|ZP_10391636.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
gi|394314048|gb|EJE51000.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
Length = 117
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ ++V L TD TL FS FG V AK++ RE+G SKGFGFV+ A+ E A AI
Sbjct: 2 SSKIYVGNLPYSVTDSTLESNFSEFGNVTSAKVMMDRETGRSKGFGFVEMASAEVAQAAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
G+ G +DG I V A+PR+
Sbjct: 62 TGLHGMSVDGRSIVVNLARPRE 83
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
F+ LS TTDE+L+D FS FG + AK+V + SG S+GFGFV + +A AIEGM
Sbjct: 9 CFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEGM 68
Query: 100 DGKFLDGWVIFVEYAKPRQP 119
+G LDG I V+ A+P+ P
Sbjct: 69 NGLDLDGRNITVDKAQPQGP 88
>gi|399886791|gb|AFP52931.1| RBP1 [Hordeum vulgare]
Length = 162
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV LS T D L FS+FGE++ AKI+ RE+G S+GFGFV ++ +A AIEGM
Sbjct: 11 CFVGSLSWNTDDRGLEAAFSSFGEILDAKIINDRETGRSRGFGFVSFSNEQAMQDAIEGM 70
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 71 NGKELDGRSIVVNEAQS 87
>gi|242036065|ref|XP_002465427.1| hypothetical protein SORBIDRAFT_01g038690 [Sorghum bicolor]
gi|241919281|gb|EER92425.1| hypothetical protein SORBIDRAFT_01g038690 [Sorghum bicolor]
Length = 727
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L D L FS FG++V AK++K R +G SKG+GFVKY+ + A AI
Sbjct: 428 TNLYIGYLPPTMDDAGLVSLFSQFGDIVMAKVIKDRNTGQSKGYGFVKYSDVSQANAAIA 487
Query: 98 GMDGKFLDGWVIFVEYA-KPRQP 119
M+G L+G VI V A KP QP
Sbjct: 488 AMNGHHLEGRVIAVRVAGKPPQP 510
>gi|326487468|dbj|BAJ89718.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510625|dbj|BAJ87529.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518508|dbj|BAJ88283.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520529|dbj|BAK07523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527353|dbj|BAK04618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 161
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 56/82 (68%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T D++L++ FS +G+V+ +KI+ RE+G S+GFGFV +A+ EA
Sbjct: 2 ADVEYRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
+AIE M+G+ LDG I V A+
Sbjct: 62 QAIEAMNGQDLDGRNITVNEAQ 83
>gi|114145394|dbj|BAF30986.1| glycine-rich RNA-binding protein [Triticum aestivum]
Length = 163
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 56/82 (68%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T D++L++ FS +G+V+ +KI+ RE+G S+GFGFV +A+ EA
Sbjct: 2 ADVEYRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
+AIE M+G+ LDG I V A+
Sbjct: 62 QAIEAMNGQDLDGRNITVNEAQ 83
>gi|469072|dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 53/83 (63%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ TTD TL + FS +GEV+ +KI+ RE+G S+GFGFV + ++
Sbjct: 2 AEVEYRCFVGGLAWATTDRTLGEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIEGM+G+ LDG I V A+
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQS 84
>gi|159164540|pdb|2FC8|A Chain A, Solution Structure Of The Rrm_1 Domain Of Ncl Protein
Length = 102
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
Query: 23 SSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFG 82
S S P R Q PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFG
Sbjct: 3 SGSSGPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG---SVRARIVTDRETGSSKGFG 57
Query: 83 FVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
FV + + E A A E M+ +DG + +++AKP+
Sbjct: 58 FVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 92
>gi|218193471|gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L FS +GE++ +KI+ RE+G S+GFGFV +++ ++ AIEGM
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKPRQP 119
+GK LDG I V A+ R+
Sbjct: 70 NGKELDGRNITVNEAQSRRS 89
>gi|302756609|ref|XP_002961728.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
gi|300170387|gb|EFJ36988.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
Length = 130
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
++ LF+ GL+ D TLR F+ +GEV A+++ RE+G S+GFGFV + A A+
Sbjct: 9 ASKLFIGGLAWGVDDGTLRTAFANYGEVTEARVIMDRETGRSRGFGFVTFENDNEAKAAV 68
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLPSQN 126
+GMDG L G I V+YA R P+ P Q+
Sbjct: 69 QGMDGHELGGRSIRVDYASDR--PSAPRQD 96
>gi|120610816|ref|YP_970494.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120589280|gb|ABM32720.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 116
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 53/87 (60%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S ++V L TDE+LR F+ FG V +KI+ RE+G SKGFGFV+ ++ E A AI
Sbjct: 2 SCKIYVGNLPYSVTDESLRSNFAEFGGVTSSKIMTDRETGRSKGFGFVEMSSAEDAQSAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLP 123
G++G +DG I V A+PR+ P
Sbjct: 62 TGLNGLSVDGRSIVVNLARPREANGGP 88
>gi|242076850|ref|XP_002448361.1| hypothetical protein SORBIDRAFT_06g025810 [Sorghum bicolor]
gi|241939544|gb|EES12689.1| hypothetical protein SORBIDRAFT_06g025810 [Sorghum bicolor]
Length = 727
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L D L FS FG++V AK++K R +G SKG+GFVKY+ + A AI
Sbjct: 429 TNLYIGYLPPTMDDPGLISLFSQFGDIVMAKVIKDRNTGQSKGYGFVKYSDVSQANAAIA 488
Query: 98 GMDGKFLDGWVIFVEYA-KPRQP 119
M+G L+G VI V A KP QP
Sbjct: 489 AMNGHHLEGRVIAVRVAGKPPQP 511
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
F+ LS TTDE+L+D FS FG + AK+V + SG S+GFGFV + +A AIEGM
Sbjct: 9 CFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEGM 68
Query: 100 DGKFLDGWVIFVEYAKPRQP 119
+G LDG I V+ A+P+ P
Sbjct: 69 NGLDLDGRNITVDKAQPQGP 88
>gi|297741463|emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ T D++L FS FGE++ +KI+ RE+G S+GFGFV +++ ++
Sbjct: 4 AEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMR 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIEGM+G+ LDG I V A+
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQS 86
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 25 SLNPPQRPQA-----EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSK 79
S+ P ++ +A E +TN+FV LS ++ L+ F + GEVV A++V R+S S+
Sbjct: 175 SIAPAKKARADGGDEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSR 234
Query: 80 GFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
GFG+V++A LE++ KAIE DG +DG I V YA R+P
Sbjct: 235 GFGYVEFADLESSAKAIE-KDGSEIDGRAIRVNYATQRKP 273
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 26 LNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVK 85
N Q P P+ L++ LS T++ + + F G+V ++ R++G KGFG+V+
Sbjct: 284 FNDKQSP---PAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQ 340
Query: 86 YATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
+++++ A A++ M+G + G I V++A P+Q
Sbjct: 341 FSSVDDASAALKAMNGAEIAGRAIRVDFAPPKQ 373
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 25 SLNPPQRPQA-----EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSK 79
S+ P ++ +A E +TN+FV LS ++ L+ F + GEVV A++V R+S S+
Sbjct: 178 SIAPAKKARADGGDEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSR 237
Query: 80 GFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
GFG+V++A LE++ KAIE DG +DG I V YA R+P
Sbjct: 238 GFGYVEFADLESSAKAIE-KDGSEIDGRAIRVNYATQRKP 276
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 26 LNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVK 85
N Q P P+ L++ LS T++ + + F G+V ++ R++G KGFG+V+
Sbjct: 287 FNDKQSP---PAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQ 343
Query: 86 YATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
+++++ A A++ M+G + G I V++A P+Q
Sbjct: 344 FSSVDDASAALKAMNGAEIAGRAIRVDFAPPKQ 376
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T + +L FS +GE++ +KI+ RE+G S+GFGFV +++ +A AIEGM
Sbjct: 10 CFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKPRQP 119
+GK LDG I V A+ R+
Sbjct: 70 NGKELDGRNITVNEAQSRRS 89
>gi|357152187|ref|XP_003576037.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 102
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D++L + F +FGE++ AK++ RE+G S+GFGFV + T +A AI M
Sbjct: 6 CFVGGLAWVTDDQSLENAFRSFGEILDAKVIPDRETGRSRGFGFVTFTTEQAMQNAINAM 65
Query: 100 DGKFLDGWVIFVEYAKPR 117
+GK +DG I V A+ R
Sbjct: 66 NGKDIDGRTISVNMAQAR 83
>gi|34534595|dbj|BAC87055.1| unnamed protein product [Homo sapiens]
Length = 603
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 445 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 487
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 488 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 541
>gi|115454539|ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 53/79 (67%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L FS +GE++ +KI+ RE+G S+GFGFV +++ ++ AIEGM
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
+GK LDG I V A+ R+
Sbjct: 70 NGKELDGRNITVNEAQSRR 88
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE NLFV LS ++ LR F FGE+V +I+ RE+G KGFG+V++AT A
Sbjct: 230 AEGIKNLFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSADAA 289
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYG 133
KA M LDG + V+++ PRQ P N+ +YG
Sbjct: 290 KAQAEMHQYELDGRPLNVDFSTPRQKPDAGKTNDRANKYG 329
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 51/83 (61%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
PS LF+ LS T++++++ F+ +G + + R++G KGFG+V + + E A A
Sbjct: 335 PSNTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQEEATAA 394
Query: 96 IEGMDGKFLDGWVIFVEYAKPRQ 118
++ ++G+ + G I ++YA PR+
Sbjct: 395 LDALNGQDIAGRNIRIDYAAPRE 417
>gi|119591368|gb|EAW70962.1| nucleolin, isoform CRA_c [Homo sapiens]
gi|193785526|dbj|BAG50892.1| unnamed protein product [Homo sapiens]
Length = 536
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 378 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 420
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 421 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 474
>gi|37906123|gb|AAP44766.1| nucleolin [Bos taurus]
Length = 203
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 60 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 102
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
+ A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 103 --SIRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 156
>gi|223974749|gb|ACN31562.1| unknown [Zea mays]
Length = 326
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 41 FVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMD 100
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T EA AIEGM+
Sbjct: 11 FVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMN 70
Query: 101 GKFLDGWVIFVEYAKPRQ 118
GK LDG I V A+ R+
Sbjct: 71 GKELDGRNITVNEAQFRR 88
>gi|390600853|gb|EIN10247.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 329
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 20 SPFSSSLNPPQRPQAEP-----STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRE 74
SP+S PP+RP P S+ L V GLS RT + L D FS FG+V IV +
Sbjct: 52 SPYSRRSPPPKRPTHAPHAPPPSSVLGVFGLSIRTQERDLDDEFSRFGQVEKVTIVYDQR 111
Query: 75 SGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
SG S+GFGF+K AT+E A KAIE ++G L+G I V+Y+ +P
Sbjct: 112 SGRSRGFGFIKMATVEDATKAIENLNGVDLNGRRIRVDYSVTERP 156
>gi|224012523|ref|XP_002294914.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
gi|220969353|gb|EED87694.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
Length = 612
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L TD+ LRD FSA G + A+++K ++G S+GFGFV Y+T E A +A+
Sbjct: 295 VNLYVKNLDDTVTDDVLRDEFSAMGTITSARVMKDLKTGISRGFGFVCYSTPEDATRAVN 354
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK + G IFV A+ R
Sbjct: 355 EMNGKIILGKPIFVALAQRR 374
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+FV L + ++ L DTFS FG ++ K+V + +G SKG+G+V Y T EAA AIE
Sbjct: 98 NIFVKNLHEGIDNKQLYDTFSLFGNILSCKVVTDKATGLSKGYGYVHYETNEAAASAIEK 157
Query: 99 MDGKFLDG 106
+DG +DG
Sbjct: 158 LDGMLIDG 165
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
RP TN+F+ + T++ LR+ F FGEVV A K +E S GFGFV +AT E
Sbjct: 179 RPGQADWTNVFIKNIPFEWTEDKLREEFEGFGEVVSA---KPKEVQGSLGFGFVNFATHE 235
Query: 91 AAGKAIEGMDGK 102
AA A++ M+ K
Sbjct: 236 AAAAAVKEMNDK 247
>gi|449439247|ref|XP_004137398.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like-B-like
[Cucumis sativus]
Length = 170
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
PST L++SGLS RTT+E+LR+ F +FG++V +V R + +GF F++YA+ E + KA
Sbjct: 87 PSTRLYISGLSFRTTEESLRNAFKSFGQLVEVNLVMDRLANRPRGFAFLRYASEEESQKA 146
Query: 96 IEGMDGK 102
IEGM GK
Sbjct: 147 IEGMHGK 153
>gi|148539604|ref|NP_001091917.1| polyA-binding protein [Strongylocentrotus purpuratus]
gi|126722149|emb|CAM57104.1| polyA-binding protein [Strongylocentrotus purpuratus]
Length = 640
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+V E+G +KG+GFV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKAMYDTFSAFGHILSCKVVTD-ENGVNKGYGFVHFETQEAANKAIEK 158
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V Y PR+
Sbjct: 159 VNGMLLNGKKVYVGYFIPRK 178
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS +G + AK++ ++ SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDEIDDERLRKEFSRYGTITSAKVMSDDKAN-SKGFGFVCFSSPEEATKAVT 352
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+G+ L ++V A+
Sbjct: 353 EMNGRILVAKPLYVALAQ 370
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+F+ L++ D L + +G ++ AKI+ + SKGFGF+ + EAA ++
Sbjct: 192 TNVFIKNLAEDVDDGKLAEFGGQYGSILSAKIM--FDDSKSKGFGFISFEDHEAANDFVK 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
++G ++G ++ A+ +
Sbjct: 250 TINGSEVNGRTLYAGRAQKK 269
>gi|357120144|ref|XP_003561789.1| PREDICTED: uncharacterized protein LOC100835076 [Brachypodium
distachyon]
Length = 356
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 51/83 (61%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P NLFV+GLS R TD L FS GEV+ A IV + S+GFGFV ATL+ A +
Sbjct: 48 PGNNLFVTGLSSRLTDRDLEKHFSTEGEVIDASIVLDPWTRESRGFGFVTMATLKEADRC 107
Query: 96 IEGMDGKFLDGWVIFVEYAKPRQ 118
I+ +D L+G VI VE AK R+
Sbjct: 108 IKYLDRSVLEGRVITVEKAKRRR 130
>gi|343961999|dbj|BAK62587.1| nucleolin [Pan troglodytes]
Length = 537
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 379 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 421
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 422 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 475
>gi|300121030|emb|CBK21412.2| unnamed protein product [Blastocystis hominis]
Length = 296
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 24 SSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGF 83
+S N Q +FVS LS TTDE LRD FS G++ H KI+ R++G S+G G
Sbjct: 85 NSENVRQNRNYNDENKVFVSSLSWNTTDEMLRDAFSQCGKIEHYKILTDRQTGRSRGMGI 144
Query: 84 VKYATLEAAGKAIEGMDGKFLDGWVIFV-EYAKPRQPPTLPSQ 125
VK++T E AI M+G LDG I V E+ R PS
Sbjct: 145 VKFSTREEMNNAISTMNGSTLDGRQIAVREFLGERGSTGAPSN 187
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 64 VVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAK 115
+V +IV R +G +GFGFV ++T + KA+E +G ++G I VE AK
Sbjct: 29 LVTLQIVYDRNTGRPRGFGFVSFSTEDGLNKAME-QNGSLINGREIRVEVAK 79
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 54/82 (65%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ T D++L FS FGE++ +KI+ RE+G S+GFGFV +++ ++
Sbjct: 4 AEIEYRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMR 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AIEGM+G+ LDG I V A+
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
>gi|224071499|ref|XP_002303489.1| predicted protein [Populus trichocarpa]
gi|222840921|gb|EEE78468.1| predicted protein [Populus trichocarpa]
Length = 794
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
+P+ TNL++ L D+ L FS+FGE+V AK++K R +G SKG+GFVKY ++
Sbjct: 496 KPKEYDDTNLYIGYLPPNLDDDGLIGLFSSFGEIVMAKVIKDRITGLSKGYGFVKYCDVQ 555
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYA 114
A AI M+G +DG I V A
Sbjct: 556 MANNAIASMNGYRIDGRTIAVRVA 579
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
S+ LF+ GL+ T + TLRD FS+FG V KI+ R++G S+GFGFV + + E A A
Sbjct: 43 SSSKLFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVA 102
Query: 96 IEGMDGKFLDGWVIFVEYAKPRQPPT 121
++ MDG+ L G I V+YA + T
Sbjct: 103 LQEMDGRELAGRQIRVDYATDKARET 128
>gi|6911144|gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 54/83 (65%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ TTD++L + FS +GE++ +KI+ RE+G S+GFGFV + ++
Sbjct: 4 ADVEYRCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQSMR 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIEGM+G+ LDG I V A+
Sbjct: 64 DAIEGMNGQTLDGRNITVNEAQS 86
>gi|260221864|emb|CBA30852.1| Putative RNA-binding protein rbpB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 124
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 54/82 (65%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ ++V L TD++L+ FS FGEV AK++ R++G SKGF FV+ +T A AI
Sbjct: 28 SSKIYVGNLPYSVTDDSLQSNFSEFGEVTSAKVMMDRDTGRSKGFAFVEMSTPAFAQAAI 87
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+G++G+ +DG I V A+PR+
Sbjct: 88 DGLNGQSVDGRSIVVNLARPRE 109
>gi|238011394|gb|ACR36732.1| unknown [Zea mays]
Length = 149
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T EA AIEGM
Sbjct: 10 CFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 70 NGKELDGRNITVNEAQS 86
>gi|219888685|gb|ACL54717.1| unknown [Zea mays]
gi|414869098|tpg|DAA47655.1| TPA: glycine-rich protein1 [Zea mays]
Length = 144
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T EA AIEGM
Sbjct: 10 CFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 70 NGKELDGRNITVNEAQS 86
>gi|195612516|gb|ACG28088.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|414869096|tpg|DAA47653.1| TPA: glycine-rich protein1 isoform 1 [Zea mays]
gi|414869097|tpg|DAA47654.1| TPA: glycine-rich protein1 isoform 2 [Zea mays]
Length = 155
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T EA AIEGM
Sbjct: 10 CFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 70 NGKELDGRNITVNEAQS 86
>gi|195609654|gb|ACG26657.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612080|gb|ACG27870.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612572|gb|ACG28116.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T EA AIEGM
Sbjct: 10 CFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 70 NGKELDGRNITVNEAQS 86
>gi|150007582|ref|YP_001302325.1| RNA-binding protein rbpA [Parabacteroides distasonis ATCC 8503]
gi|255013892|ref|ZP_05286018.1| putative RNA-binding protein rbpA [Bacteroides sp. 2_1_7]
gi|298375526|ref|ZP_06985483.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
3_1_19]
gi|410101874|ref|ZP_11296802.1| hypothetical protein HMPREF0999_00574 [Parabacteroides sp. D25]
gi|423331931|ref|ZP_17309715.1| hypothetical protein HMPREF1075_01728 [Parabacteroides distasonis
CL03T12C09]
gi|149936006|gb|ABR42703.1| putative RNA-binding protein rbpA [Parabacteroides distasonis ATCC
8503]
gi|298268026|gb|EFI09682.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
3_1_19]
gi|409229772|gb|EKN22644.1| hypothetical protein HMPREF1075_01728 [Parabacteroides distasonis
CL03T12C09]
gi|409239672|gb|EKN32456.1| hypothetical protein HMPREF0999_00574 [Parabacteroides sp. D25]
Length = 123
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NL++S LS +DE LR F+ +GE+ AK++ RE+G S+GFGFV+ + E A KAIE
Sbjct: 2 NLYISNLSYNISDEDLRLLFADYGEITSAKVIMDRETGRSRGFGFVELSDDELAKKAIEE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQP 119
++ DG VI + A+PR+
Sbjct: 62 LNQASYDGKVINITEARPRED 82
>gi|402889647|ref|XP_003908120.1| PREDICTED: nucleolin isoform 3 [Papio anubis]
Length = 634
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 476 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 518
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 519 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 572
>gi|301764124|ref|XP_002917484.1| PREDICTED: nucleolin-like [Ailuropoda melanoleuca]
Length = 717
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 559 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 601
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 602 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 655
>gi|26325114|dbj|BAC26311.1| unnamed protein product [Mus musculus]
Length = 707
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 564 RSQPSKTLFVKGLSENTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 620
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 621 KAAKEAMEDGEIDGNKVTLDWAKPK 645
>gi|281349809|gb|EFB25393.1| hypothetical protein PANDA_005719 [Ailuropoda melanoleuca]
Length = 645
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 515 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 557
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 558 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 611
>gi|256421371|ref|YP_003122024.1| RNP-1 like RNA-binding protein [Chitinophaga pinensis DSM 2588]
gi|256036279|gb|ACU59823.1| RNP-1 like RNA-binding protein [Chitinophaga pinensis DSM 2588]
Length = 108
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V+ L R D L FS FGEV AKI+K E+G S+GFGFV+ E KA++
Sbjct: 2 NIYVANLHYRLNDADLHQIFSEFGEVTSAKIIKDHETGRSRGFGFVEMPNQEEGSKAMDS 61
Query: 99 MDGKFLDGWVIFVEYAKPRQP 119
++G ++G + V A+P+QP
Sbjct: 62 LNGTEIEGKQLMVNEARPKQP 82
>gi|422295561|gb|EKU22860.1| glycine-rich rna-binding protein 4 [Nannochloropsis gaditana
CCMP526]
Length = 186
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 29 PQRP----QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFV 84
P RP Q+E LFV LS RT LR+ F FG +V + ++++RE+G S+GFGFV
Sbjct: 17 PPRPTSPGQSEEGYKLFVGNLSFRTESAALREAFEPFGRIVFSTVIENRETGQSRGFGFV 76
Query: 85 KYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
Y A AI MD LDG + V +A+PR+
Sbjct: 77 VYEQKHEADAAISRMDNAELDGRTLRVNFARPRE 110
>gi|237833669|ref|XP_002366132.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211963796|gb|EEA98991.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 576
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L ++T+ DTFSAFG ++ AKI++ E+G S+GFGFV + T EA+ A+
Sbjct: 117 NVFLGNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAA 176
Query: 99 MDGKFLDGWVIFVEYA 114
M+G+F+ I V YA
Sbjct: 177 MNGQFICNRPIHVSYA 192
>gi|221508124|gb|EEE33711.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 576
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L ++T+ DTFSAFG ++ AKI++ E+G S+GFGFV + T EA+ A+
Sbjct: 117 NVFLGNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAA 176
Query: 99 MDGKFLDGWVIFVEYA 114
M+G+F+ I V YA
Sbjct: 177 MNGQFICNRPIHVSYA 192
>gi|20152613|emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ T D++L FS +G+V+ +KI+ RE+G S+GFGFV +++ +A
Sbjct: 3 AEVEYRCFVGGLAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQAMR 62
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIEGM+G+ LDG I V A+
Sbjct: 63 DAIEGMNGQDLDGRNITVNEAQS 85
>gi|221486340|gb|EEE24601.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 576
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L ++T+ DTFSAFG ++ AKI++ E+G S+GFGFV + T EA+ A+
Sbjct: 117 NVFLGNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAA 176
Query: 99 MDGKFLDGWVIFVEYA 114
M+G+F+ I V YA
Sbjct: 177 MNGQFICNRPIHVSYA 192
>gi|406883357|gb|EKD30966.1| hypothetical protein ACD_77C00438G0003 [uncultured bacterium]
Length = 117
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+S LS D LR+ F+ +GE+ AK++ RE+G S+GFGFV+ T A KAIE
Sbjct: 2 NIFISNLSWAVRDADLRELFAEYGEISSAKVITDRETGKSRGFGFVEMPTEAEAKKAIEE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
+D DG VI V AKPR+
Sbjct: 62 LDQAEYDGKVISVNVAKPRE 81
>gi|403278071|ref|XP_003930653.1| PREDICTED: nucleolin-like [Saimiri boliviensis boliviensis]
Length = 713
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 555 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 597
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 598 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 651
>gi|296205845|ref|XP_002749930.1| PREDICTED: uncharacterized protein LOC100395223 isoform 1
[Callithrix jacchus]
Length = 713
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 555 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 597
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 598 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 651
>gi|345790650|ref|XP_850477.2| PREDICTED: nucleolin isoform 1 [Canis lupus familiaris]
Length = 715
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 557 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 599
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 600 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 653
>gi|193788267|dbj|BAG53161.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG SP + S +PS LFV GLS+ TT+ETL+++F
Sbjct: 475 AIRLELQGPRG-------SPNAGS---------QPSKTLFVKGLSEDTTEETLKESFDG- 517
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 518 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 571
>gi|223942615|gb|ACN25391.1| unknown [Zea mays]
Length = 120
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T EA AIEGM
Sbjct: 10 CFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 70 NGKELDGRNITVNEAQS 86
>gi|116780918|gb|ABK21879.1| unknown [Picea sitchensis]
Length = 172
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ T D +L+D FS FGE++ +KI+ RE+G S+GFGFV ++ ++
Sbjct: 5 AEVEYRCFVGGLAWATDDRSLQDAFSPFGEILESKIISDRETGRSRGFGFVTFSDEQSMR 64
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AI+ M+GK LDG I V A+
Sbjct: 65 DAIDAMNGKVLDGRNITVNPAQ 86
>gi|258564224|ref|XP_002582857.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908364|gb|EEP82765.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 146
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ LF+ GL+ TTDETLR+ FS +G + A +VK R++ S+GFGFV++A+ A A+
Sbjct: 2 SKLFIGGLAWHTTDETLREGFSKYGTIEEAIVVKDRDTNRSRGFGFVRFASEAEADAAMN 61
Query: 98 GMDGKFLDGWVIFVEYAKPRQP 119
M + DG +I V+ A RQP
Sbjct: 62 AMSNQEFDGRMIRVDKAADRQP 83
>gi|21750187|dbj|BAC03738.1| unnamed protein product [Homo sapiens]
Length = 687
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 529 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 571
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 572 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 625
>gi|387050|gb|AAA36966.1| nucleolin, C23, partial [Cricetulus griseus]
Length = 679
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 532 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 588
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 589 KAAKEAMEDGEIDGNKVTLDWAKPK 613
>gi|128842|sp|P08199.2|NUCL_MESAU RecName: Full=Nucleolin; AltName: Full=Protein C23
Length = 714
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 567 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 623
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 624 KAAKEAMEDGEIDGNKVTLDWAKPK 648
>gi|402889645|ref|XP_003908119.1| PREDICTED: nucleolin isoform 2 [Papio anubis]
Length = 683
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 525 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 567
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 568 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 621
>gi|311780287|gb|ADQ08684.1| putative glycine-rich RNA-binding protein 1 [Malus hupehensis]
Length = 164
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ T +E L FS +GE++ +KI+ RE+G S+GFGFV + + +A
Sbjct: 4 AEIEFRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMR 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIEGM+G+ LDG I V A+
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQS 86
>gi|296142019|gb|ADG96008.1| putative glycine-rich RNA-binding protein 1 [Malus prunifolia]
Length = 171
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ T +E L FS +GE++ +KI+ RE+G S+GFGFV + + +A
Sbjct: 4 AEIEFRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMR 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIEGM+G+ LDG I V A+
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQS 86
>gi|402889643|ref|XP_003908118.1| PREDICTED: nucleolin isoform 1 [Papio anubis]
Length = 695
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 537 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 579
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 580 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 633
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 51/75 (68%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV GLS TT+E+L + F+ +G + +++ +E+G S+GFGFVKY E A A+EGM
Sbjct: 7 LFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEGM 66
Query: 100 DGKFLDGWVIFVEYA 114
+GK +DG I V+ A
Sbjct: 67 NGKSVDGRTIRVDEA 81
>gi|148708277|gb|EDL40224.1| nucleolin, isoform CRA_e [Mus musculus]
Length = 706
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 563 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 619
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 620 KAAKEAMEDGEIDGNKVTLDWAKPK 644
>gi|197098386|ref|NP_001127178.1| nucleolin [Pongo abelii]
gi|75070972|sp|Q5RF26.3|NUCL_PONAB RecName: Full=Nucleolin
gi|55725699|emb|CAH89631.1| hypothetical protein [Pongo abelii]
Length = 712
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 554 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 596
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 597 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 650
>gi|397502540|ref|XP_003821912.1| PREDICTED: nucleolin-like [Pan paniscus]
Length = 710
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 552 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 594
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 595 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 648
>gi|55956788|ref|NP_005372.2| nucleolin [Homo sapiens]
gi|90110781|sp|P19338.3|NUCL_HUMAN RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|62988860|gb|AAY24247.1| unknown [Homo sapiens]
gi|119591367|gb|EAW70961.1| nucleolin, isoform CRA_b [Homo sapiens]
gi|119591369|gb|EAW70963.1| nucleolin, isoform CRA_b [Homo sapiens]
gi|168277892|dbj|BAG10924.1| nucleolin [synthetic construct]
Length = 710
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 552 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 594
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 595 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 648
>gi|426338868|ref|XP_004033393.1| PREDICTED: nucleolin [Gorilla gorilla gorilla]
Length = 710
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG SP + S +PS LFV GLS+ TT+ETL+++F
Sbjct: 552 AIRLELQGPRG-------SPNARS---------QPSKTLFVKGLSEDTTEETLKESFDG- 594
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 595 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 648
>gi|226222462|gb|ACO38649.1| nucleolin-like protein [Rattus norvegicus]
Length = 569
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 426 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 482
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 483 KTAKEAMEDGEIDGNKVTLDWAKPK 507
>gi|374721345|gb|AEZ68008.1| nucleolin [Chlorocebus aethiops]
Length = 712
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG SP + S +PS LFV GLS+ TT+ETL+++F
Sbjct: 554 AIRLELQGPRG-------SPNARS---------QPSKTLFVKGLSEDTTEETLKESFDG- 596
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 597 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 650
>gi|26327461|dbj|BAC27474.1| unnamed protein product [Mus musculus]
Length = 707
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 564 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 620
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 621 KAAKEAMEDGEIDGNKVTLDWAKPK 645
>gi|410969636|ref|XP_003991299.1| PREDICTED: nucleolin [Felis catus]
Length = 715
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 557 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 599
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 600 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 653
>gi|297265320|ref|XP_001116949.2| PREDICTED: nucleolin-like [Macaca mulatta]
gi|75075722|sp|Q4R4J7.3|NUCL_MACFA RecName: Full=Nucleolin
gi|67967725|dbj|BAE00345.1| unnamed protein product [Macaca fascicularis]
gi|67971272|dbj|BAE01978.1| unnamed protein product [Macaca fascicularis]
Length = 711
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG SP + S +PS LFV GLS+ TT+ETL+++F
Sbjct: 553 AIRLELQGPRG-------SPNARS---------QPSKTLFVKGLSEDTTEETLKESFDG- 595
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 596 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 649
>gi|84875537|ref|NP_035010.3| nucleolin [Mus musculus]
gi|128843|sp|P09405.2|NUCL_MOUSE RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|12802527|gb|AAK07920.1|AF318184_1 nucleolin [Mus musculus]
gi|53454|emb|CAA30538.1| nucleolin [Mus musculus]
gi|26350437|dbj|BAC38858.1| unnamed protein product [Mus musculus]
gi|74179984|dbj|BAE36542.1| unnamed protein product [Mus musculus]
gi|74194436|dbj|BAE37270.1| unnamed protein product [Mus musculus]
gi|74201341|dbj|BAE26119.1| unnamed protein product [Mus musculus]
gi|148708278|gb|EDL40225.1| nucleolin, isoform CRA_f [Mus musculus]
Length = 707
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 564 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 620
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 621 KAAKEAMEDGEIDGNKVTLDWAKPK 645
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
F+ LS TTDE+L+D F FG + AK+V + SG S+GFGFV + +A AIEGM
Sbjct: 9 CFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIEGM 68
Query: 100 DGKFLDGWVIFVEYAKPRQP 119
+G LDG I V+ A+P+ P
Sbjct: 69 NGLDLDGRAITVDKAQPQGP 88
>gi|13529464|gb|AAH05460.1| Nucleolin [Mus musculus]
Length = 707
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 564 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 620
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 621 KAAKEAMEDGEIDGNKVTLDWAKPK 645
>gi|355761078|gb|EHH61752.1| hypothetical protein EGM_19839, partial [Macaca fascicularis]
Length = 705
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 547 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 589
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 590 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 643
>gi|333381249|ref|ZP_08472931.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
gi|332830219|gb|EGK02847.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
Length = 107
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F++GLS D L+D FS +GE+ AK++ + +G SKG+GFV+ A A KAIE
Sbjct: 2 NIFIAGLSYSINDNDLKDLFSEYGEITSAKVIMDKATGRSKGYGFVELADNAAGQKAIEE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQPPTLP 123
++G DG I V A+PR P
Sbjct: 62 LNGAEYDGRTISVSEARPRTEGDRP 86
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V LS + T+E LR F +GEV I+ RE+G S+GF FV+ A E A AIE
Sbjct: 55 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 114
Query: 98 GMDGKFLDGWVIFVEYAKPRQP 119
++G +DG + V A+PR+P
Sbjct: 115 NLNGHEIDGRSVTVNEARPREP 136
>gi|128844|sp|P13383.3|NUCL_RAT RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|205792|gb|AAA41732.1| nucleolin [Rattus norvegicus]
Length = 713
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 570 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 626
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 627 KAAKEAMEDGEIDGNKVTLDWAKPK 651
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V LS + T+E LR F +GEV I+ RE+G S+GF FV+ A E A AIE
Sbjct: 55 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 114
Query: 98 GMDGKFLDGWVIFVEYAKPRQP 119
++G +DG + V A+PR+P
Sbjct: 115 NLNGHEIDGRSVTVNEARPREP 136
>gi|332815667|ref|XP_516145.3| PREDICTED: nucleolin [Pan troglodytes]
Length = 711
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG SP + S +PS LFV GLS+ TT+ETL+++F
Sbjct: 553 AIRLELQGPRG-------SPNARS---------QPSKTLFVKGLSEDTTEETLKESFDG- 595
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 596 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 649
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V LS + T+E LR F +GEV I+ RE+G S+GF FV+ A E A AIE
Sbjct: 55 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 114
Query: 98 GMDGKFLDGWVIFVEYAKPRQP 119
++G +DG + V A+PR+P
Sbjct: 115 NLNGHEIDGRSVTVNEARPREP 136
>gi|161760644|ref|NP_036881.2| nucleolin [Rattus norvegicus]
gi|55250726|gb|AAH85751.1| Nucleolin [Rattus norvegicus]
gi|149016332|gb|EDL75578.1| nucleolin, isoform CRA_c [Rattus norvegicus]
Length = 714
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 571 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 627
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 628 KAAKEAMEDGEIDGNKVTLDWAKPK 652
>gi|255571962|ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 166
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T+D+ L + FSA+GEV+ +KI+ RE+G S+GFGFV + ++
Sbjct: 4 ADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMR 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIEGM+G+ LDG I V A+
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQS 86
>gi|119591366|gb|EAW70960.1| nucleolin, isoform CRA_a [Homo sapiens]
Length = 490
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 332 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 374
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 375 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 428
>gi|18076086|emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T+D+ L + FSA+GEV+ +KI+ RE+G S+GFGFV + ++
Sbjct: 4 ADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMR 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIEGM+G+ LDG I V A+
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQS 86
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L+V LS TTDETLR TFS FGEV + I++ R++G ++GFGFV ++T E A A++ +
Sbjct: 4 LYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVDAL 63
Query: 100 DGKFLDGWVIFVEYAKPR 117
+ + LDG I V A R
Sbjct: 64 NEQELDGRRIRVNVANAR 81
>gi|74177681|dbj|BAE38940.1| unnamed protein product [Mus musculus]
Length = 707
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 564 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 620
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 621 KAAKEAMEDGEIDGNKVTLDWAKPK 645
>gi|145491019|ref|XP_001431509.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145522722|ref|XP_001447205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398614|emb|CAK64111.1| unnamed protein product [Paramecium tetraurelia]
gi|124414705|emb|CAK79808.1| unnamed protein product [Paramecium tetraurelia]
Length = 260
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
E NLF+ L ++TL +TFSAFG ++ KI+++ E+G SKG+GFV Y E++
Sbjct: 103 EVGANLFIGNLDTEIDEKTLYETFSAFGHILSTKIMRNPETGVSKGYGFVSYDNFESSDG 162
Query: 95 AIEGMDGKFLDGWVIFVEYA 114
A+ M+G+FL +I VEYA
Sbjct: 163 ALTAMNGQFLGTKIIRVEYA 182
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 28 PPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYA 87
PP + + +T +++ L ++ TD+ + + F G VV+ I K + SG +G+GFV++
Sbjct: 10 PPLYERNQEAT-IYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFK 68
Query: 88 TLEAAGKAIEGM 99
+ E A AI+ M
Sbjct: 69 SEEDADYAIKIM 80
>gi|31455187|gb|AAH06494.3| NCL protein [Homo sapiens]
gi|31455191|gb|AAH06516.3| NCL protein [Homo sapiens]
gi|31455242|gb|AAH02343.3| NCL protein [Homo sapiens]
Length = 482
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 324 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 366
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 367 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 420
>gi|149016331|gb|EDL75577.1| nucleolin, isoform CRA_b [Rattus norvegicus]
Length = 698
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 555 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 611
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 612 KAAKEAMEDGEIDGNKVTLDWAKPK 636
>gi|2267593|gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa Indica Group]
Length = 165
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T + +L FS +GE++ +KI+ RE+G S+GFGFV +++ +A AIEGM
Sbjct: 10 CFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKPRQP 119
GK LDG I V A+ R+
Sbjct: 70 SGKELDGRNITVNEAQSRRS 89
>gi|354502803|ref|XP_003513471.1| PREDICTED: nucleolin [Cricetulus griseus]
Length = 762
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 616 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 672
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 673 KAAKEAMEDGEIDGNKVTLDWAKPK 697
>gi|359688008|ref|ZP_09258009.1| RNP-1 like RNA-binding protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
Length = 100
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 52/98 (53%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ LFV GLS TTD TLR F G + A IV RE+G S+GFGFV + +A A+
Sbjct: 2 SSKLFVGGLSWSTTDLTLRQVFETHGAIQEANIVVDRETGRSRGFGFVTFVDQSSANAAV 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYGR 134
++GK LDG I V A+ + N FQ R
Sbjct: 62 SELNGKDLDGRNIVVSVAEDKSRSDRNRNTNRKFQRDR 99
>gi|319902685|ref|YP_004162413.1| RNP-1 like RNA-binding protein [Bacteroides helcogenes P 36-108]
gi|319417716|gb|ADV44827.1| RNP-1 like RNA-binding protein [Bacteroides helcogenes P 36-108]
Length = 102
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++++GL+ TTD L D FS +GEV A+++ RE+G S+GF FV+ EAA KAI+
Sbjct: 2 NIYIAGLNFSTTDADLNDLFSEYGEVSSARVITDRETGRSRGFAFVEMPDDEAAQKAIDE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G D I V A+PR+
Sbjct: 62 LNGAEYDNKTISVNVARPRE 81
>gi|2293480|gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group]
Length = 161
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 51/76 (67%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L FS +GE++ +KI+ RE+G S+GFGFV +++ +A AIEGM
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAK 115
+GK LDG I V A+
Sbjct: 70 NGKELDGRNITVNEAQ 85
>gi|74214426|dbj|BAE40448.1| unnamed protein product [Mus musculus]
gi|74219790|dbj|BAE40485.1| unnamed protein product [Mus musculus]
Length = 707
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 564 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 620
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 621 KAAKEAMEDGEIDGNKVTLDWAKPK 645
>gi|149016333|gb|EDL75579.1| nucleolin, isoform CRA_d [Rattus norvegicus]
gi|149016334|gb|EDL75580.1| nucleolin, isoform CRA_d [Rattus norvegicus]
Length = 496
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 353 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 409
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 410 KAAKEAMEDGEIDGNKVTLDWAKPK 434
>gi|148708273|gb|EDL40220.1| nucleolin, isoform CRA_a [Mus musculus]
Length = 537
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 394 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 450
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 451 KAAKEAMEDGEIDGNKVTLDWAKPK 475
>gi|194211413|ref|XP_001495211.2| PREDICTED: nucleolin [Equus caballus]
Length = 705
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 547 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 589
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
+ A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 590 --SIRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 643
>gi|149016335|gb|EDL75581.1| nucleolin, isoform CRA_e [Rattus norvegicus]
Length = 505
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 362 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 418
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 419 KAAKEAMEDGEIDGNKVTLDWAKPK 443
>gi|403172110|ref|XP_003331254.2| hypothetical protein PGTG_13217 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169716|gb|EFP86835.2| hypothetical protein PGTG_13217 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 392
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVH-AKIVKHRESGYSKGFGFVKYATL 89
R Q + NLF+ L + L DTFS FG +V AKI ++ +G S G+GFV Y +
Sbjct: 93 RKQVDIGANLFIGNLDANVDERMLYDTFSTFGTLVQTAKIARNPTTGQSNGYGFVAYESF 152
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
EAA AIE M+G+FL I V+YA
Sbjct: 153 EAADTAIESMNGQFLMNKAITVQYA 177
>gi|242822492|ref|XP_002487897.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
gi|218712818|gb|EED12243.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
Length = 479
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ S NLFV LS +E LR F FGE+ +I+ RESG S+GFG+V+YA +A
Sbjct: 227 ADNSPNLFVGNLSWNVDEEWLRREFEEFGELSGVRIMTERESGRSRGFGYVEYADASSAK 286
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPR----QPPTLPSQN 126
A E +DG I ++YAKPR Q P +QN
Sbjct: 287 AAYEAKKDAEIDGRTINLDYAKPRDANNQAPREKAQN 323
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 33 QAEPSTN-LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEA 91
Q P +N LFV L + +R+ F G++ ++ E+G KG+G+V++++++
Sbjct: 331 QTSPESNTLFVGNLVFGVDENAVREVFEGQGQIQGIRLPTDAETGRPKGYGYVEFSSVDE 390
Query: 92 AGKAIEGMDGKFLDGWVIFVEYAKPR 117
A +A+ + G + G I ++++ PR
Sbjct: 391 ARQALNDLQGTDIGGRAIRLDFSTPR 416
>gi|148708274|gb|EDL40221.1| nucleolin, isoform CRA_b [Mus musculus]
Length = 488
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 348 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 404
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 405 KAAKEAMEDGEIDGNKVTLDWAKPK 429
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V LS + T+E LR F +GEV I+ RE+G S+GF FV+ A E A AIE
Sbjct: 66 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 125
Query: 98 GMDGKFLDGWVIFVEYAKPRQP 119
++G +DG + V A+PR+P
Sbjct: 126 NLNGHEIDGRSVTVNEARPREP 147
>gi|26341628|dbj|BAC34476.1| unnamed protein product [Mus musculus]
Length = 550
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 407 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 463
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 464 KAAKEAMEDGEIDGNKVTLDWAKPK 488
>gi|440913256|gb|ELR62731.1| Nucleolin, partial [Bos grunniens mutus]
Length = 714
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG SP + S +PS LFV GLS+ TT+ETL+++F
Sbjct: 556 AIRLELQGPRG-------SPNARS---------QPSKTLFVKGLSEDTTEETLKESFDGS 599
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
+ A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 600 ---IRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 652
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S L +S LS T+ETL++ F + H K V ++G SKG+ F+++A+ E A +A+
Sbjct: 489 SKTLVLSNLSYSATEETLQEVFE---KATHIK-VPQNQNGKSKGYAFIEFASFEDAKEAL 544
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLPSQ 125
+ + ++G I +E PR P SQ
Sbjct: 545 NSCNKREIEGRAIRLELQGPRGSPNARSQ 573
>gi|357163035|ref|XP_003579604.1| PREDICTED: uncharacterized protein LOC100833136 [Brachypodium
distachyon]
Length = 749
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L D L + FS FGE+V AK++K R +G SKG+GFVKY+ + A AI
Sbjct: 428 TNLYIGYLPPMFDDSGLINLFSQFGEIVMAKVIKDRNTGQSKGYGFVKYSDVSQANAAIA 487
Query: 98 GMDGKFLDGWVIFVEYA-KPRQP--PTLP 123
M G L+G I V A KP QP PT P
Sbjct: 488 AMSGYHLEGRTIAVRVAGKPPQPAVPTGP 516
>gi|414587608|tpg|DAA38179.1| TPA: hypothetical protein ZEAMMB73_126317 [Zea mays]
Length = 750
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L D L FS FGE+V AK++K R +G SKG+GFVKY+ + A AI
Sbjct: 427 TNLYIGYLPPTMDDAGLVSLFSQFGEIVMAKVIKDRNTGQSKGYGFVKYSDVSQANAAIA 486
Query: 98 GMDGKFLDGWVIFVEYA-KPRQ 118
M+G L+G VI V A KP Q
Sbjct: 487 AMNGHHLEGRVIAVRVAGKPPQ 508
>gi|121705230|ref|XP_001270878.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
gi|119399024|gb|EAW09452.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
Length = 133
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ LF+ GL+ TTD+ LR F FG+V A +VK R++ S+GFGFV++++ A KA++
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAMD 61
Query: 98 GMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQ 131
M+ + DG I V+ A R P +NN FQ
Sbjct: 62 AMNNQEFDGRTIRVDKASERAP-----RNNGGFQ 90
>gi|426221705|ref|XP_004023200.1| PREDICTED: LOW QUALITY PROTEIN: nucleolin [Ovis aries]
Length = 724
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 566 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDGS 609
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
+ A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 610 ---IRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 662
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S L +S LS T+ETL++ F + H K+ ++ ++G SKG+ F+++A+ E A +A+
Sbjct: 499 SKTLVLSNLSYSATEETLQEVFE---KATHIKVPQN-QNGKSKGYAFIEFASFEDAKEAL 554
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLPSQ 125
+ + ++G I +E PR P SQ
Sbjct: 555 NSCNKREIEGRAIRLELQGPRGSPNARSQ 583
>gi|331284195|ref|NP_001193589.1| nucleolin [Bos taurus]
gi|296490214|tpg|DAA32327.1| TPA: nucleolin [Bos taurus]
Length = 720
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 562 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDGS 605
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
+ A+IV RE+G SKGFGFV + + E A A E M+ +DG + +++AKP+
Sbjct: 606 ---IRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 658
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S L +S LS T+ETL++ F + H K+ ++ ++G SKG+ F+++A+ E A +A+
Sbjct: 495 SKTLVLSNLSYSATEETLQEVFE---KATHIKVPQN-QNGKSKGYAFIEFASFEDAKEAL 550
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLPSQ 125
+ + ++G I +E PR P SQ
Sbjct: 551 NSCNKREIEGRAIRLELQGPRGSPNARSQ 579
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 55/82 (67%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ LFV GLS T + +L++ FS +G+V+ A+++ R++G S+GFGF+ + + E A A+
Sbjct: 39 SSKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASAL 98
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+ MDG+ L G I V YA ++
Sbjct: 99 QAMDGQDLHGRRIRVNYATEKR 120
>gi|329960883|ref|ZP_08299162.1| hypothetical protein HMPREF9446_00723 [Bacteroides fluxus YIT
12057]
gi|328532169|gb|EGF58973.1| hypothetical protein HMPREF9446_00723 [Bacteroides fluxus YIT
12057]
Length = 101
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++++GL+ TTD L D FS +GEV A+++ RE+G S+GFGFV+ + AA KAI+
Sbjct: 2 NIYIAGLNFSTTDADLNDLFSEYGEVSSARVITDRETGRSRGFGFVEMSDDTAAQKAIDE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQP 119
++G D I V A+PR+
Sbjct: 62 LNGAEYDQKTISVNVARPREE 82
>gi|219130188|ref|XP_002185253.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403432|gb|EEC43385.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 605
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 15 RLFSTSPFSSSLNPPQR---PQAEPST------NLFVSGLSKRTTDETLRDTFSAFGEVV 65
R T FS P R Q +PS N+FV L++ ++ L DTFS FG ++
Sbjct: 95 RAMDTMNFSMIKGKPCRIMWSQRDPSLRRSGVGNIFVKNLNEAIDNKQLYDTFSLFGNIL 154
Query: 66 HAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFV 111
K+V RE G S G+G+V Y T EAA AIE +DG +DG + V
Sbjct: 155 SCKVVTDREGGVSMGYGYVHYETAEAANAAIEKLDGMLIDGQEVQV 200
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L TD+ LRD F+ G + A+++K + G S+GFGFV Y+T E + +A+
Sbjct: 327 VNLYVKNLDDSVTDDMLRDEFAVMGTITSARVMKDAKDGRSRGFGFVCYSTPEESTRAVN 386
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+GK + IFV A+ R+
Sbjct: 387 EMNGKLIANKPIFVALAQRRE 407
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
RP + TN ++ + D L F+ FGEV+ A V ++ + GFGF+ +A E
Sbjct: 209 RPDIDSWTNCYIKNVPYEWDDARLNQEFAQFGEVLSA-TVSREDTNQTLGFGFINFAEHE 267
Query: 91 AAGKAIEGMDGK----FLDGWVI 109
+A A+E ++GK LDG I
Sbjct: 268 SAVAAVEALNGKEYTTTLDGEEI 290
>gi|242084350|ref|XP_002442600.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
gi|241943293|gb|EES16438.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
Length = 165
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L FS +GEV+ +KI+ RE+ S+GFGFV ++T EA AIEGM
Sbjct: 10 CFVGGLAWATDDNSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 70 NGKELDGRNITVNEAQS 86
>gi|387047|gb|AAA36961.1| nucleolin, partial [Cricetus cricetus]
Length = 192
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGFV + + E A
Sbjct: 45 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDA 101
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 102 KAAKEAMEDGEIDGNKVTLDWAKPK 126
>gi|356541091|ref|XP_003539016.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 207
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D+ L FS +GE+V KI+ RE+G S+GFGFV +A+ ++ AIEGM
Sbjct: 46 CFVGGLAWATDDQALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIEGM 105
Query: 100 DGKFLDGWVIFVEYAKP 116
+G+ LDG I V A+
Sbjct: 106 NGQNLDGRNITVNEAQS 122
>gi|224130158|ref|XP_002328668.1| predicted protein [Populus trichocarpa]
gi|222838844|gb|EEE77195.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q + S+ +F+ G+S +T D L++ F +G VV I+ R++G S+GFGFV Y +
Sbjct: 32 QALRCMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEGIIIMDRDTGRSRGFGFVTYTSS 91
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
E A AI+ MDG+ L G + V YA R
Sbjct: 92 EEASSAIQAMDGQDLHGRRVRVNYATER 119
>gi|21553495|gb|AAM62588.1| glycine-rich RNA-binding protein, putative [Arabidopsis thaliana]
Length = 152
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ +FV GLS T E L++ F +FG++V A +V RESG S+GFGFV Y ++E A A++
Sbjct: 33 SKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQ 92
Query: 98 GMDGKFLDGWVIFVE 112
M K LDG +I V
Sbjct: 93 AMQNKELDGRIIGVH 107
>gi|256839767|ref|ZP_05545276.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738697|gb|EEU52022.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 123
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NL++S LS +D LR F+ +GE+ AK++ RE+G S+GFGFV+ + E A KAIE
Sbjct: 2 NLYISNLSYNISDADLRQLFADYGEITSAKVIMDRETGRSRGFGFVELSDDELAKKAIEE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQP 119
++ DG VI + A+PR+
Sbjct: 62 LNQASYDGKVINITEARPRED 82
>gi|432854494|ref|XP_004067928.1| PREDICTED: nucleolin-like isoform 1 [Oryzias latipes]
Length = 698
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P+ LFV GLS+ T+D+TLRD+F V A+IV RE+G SKGFGFV + A
Sbjct: 547 PTKTLFVKGLSEDTSDQTLRDSFEG---AVGARIVTDRETGSSKGFGFVDFDNENDCKAA 603
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
E M+ +DG + ++YAKP+
Sbjct: 604 KEAMEDGEIDGSKVTLDYAKPK 625
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L V+ L+ T++ L+ TF A I + G KGF F+++ E A +A+E
Sbjct: 463 LVVNNLAFSATEDVLQSTFEK-----AASIRIPQRDGRPKGFAFIEFENAEDAKEALENF 517
Query: 100 DGKFLDGWVIFVEYAK 115
+ ++G I +EY++
Sbjct: 518 NNTEIEGRSIRLEYSQ 533
>gi|432854500|ref|XP_004067931.1| PREDICTED: nucleolin-like isoform 4 [Oryzias latipes]
Length = 655
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P+ LFV GLS+ T+D+TLRD+F V A+IV RE+G SKGFGFV + A
Sbjct: 504 PTKTLFVKGLSEDTSDQTLRDSFEG---AVGARIVTDRETGSSKGFGFVDFDNENDCKAA 560
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
E M+ +DG + ++YAKP+
Sbjct: 561 KEAMEDGEIDGSKVTLDYAKPK 582
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L V+ L+ T++ L+ TF A I + G KGF F+++ E A +A+E
Sbjct: 420 LVVNNLAFSATEDVLQSTFEK-----AASIRIPQRDGRPKGFAFIEFENAEDAKEALENF 474
Query: 100 DGKFLDGWVIFVEYAK 115
+ ++G I +EY++
Sbjct: 475 NNTEIEGRSIRLEYSQ 490
>gi|375143372|ref|YP_005005813.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361057418|gb|AEV96409.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 104
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++VS LS DE L+D F+ +GEV AK++ RE+G S+GFGFV+ A+ KAI
Sbjct: 2 NIYVSNLSFDVQDEDLKDFFAPYGEVSSAKVITDRETGRSRGFGFVEMTDEAASKKAIAE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYG 133
+DG ++ I V AKPR+ + T F G
Sbjct: 62 LDGATVENRTISVSVAKPREERSSRGGGKTGFNNG 96
>gi|6911142|gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 54/83 (65%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ TTD++L + FS +GEV+ +KI+ RE+G S+GFGFV + ++
Sbjct: 4 ADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMK 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIEGM+G+ LDG + V A+
Sbjct: 64 DAIEGMNGQTLDGRNVTVNEAQS 86
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora indica
DSM 11827]
Length = 236
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S ++V LS TTD+TLR+ F +G VV + +++ RE+G S+GFGFV Y++ E A AI
Sbjct: 2 SAKIYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
G++ LDG I V A R
Sbjct: 62 SGLNETSLDGRQIKVNLANAR 82
>gi|351723119|ref|NP_001235732.1| uncharacterized protein LOC100526902 [Glycine max]
gi|255631115|gb|ACU15923.1| unknown [Glycine max]
Length = 176
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
F+ GL+ T+D L+DTF FG+++ AK+V + SG S+GFGFV + +A +AI+ M
Sbjct: 9 CFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDAM 68
Query: 100 DGKFLDGWVIFVEYAKPRQPPT 121
+G LDG I V+ A+P+Q T
Sbjct: 69 NGMDLDGRTITVDRAQPQQGST 90
>gi|194693774|gb|ACF80971.1| unknown [Zea mays]
Length = 133
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T +A AIEGM
Sbjct: 10 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 70 NGKELDGRNITVNEAQS 86
>gi|242055771|ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
gi|241929006|gb|EES02151.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
Length = 146
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NLF+ GLS T + L+D FS +G+V+ +++ H +G SKGFGFVK+++ A A++
Sbjct: 60 NLFIGGLSYDTNETALKDAFSQYGDVIAVRVICHPTTGKSKGFGFVKFSSENQAAAALQK 119
Query: 99 MDGKFLDGWVIFVEYAKP 116
++G+ LDG I V YA
Sbjct: 120 LNGQVLDGRNIRVHYANS 137
>gi|359807285|ref|NP_001240860.1| uncharacterized protein LOC100815224 [Glycine max]
gi|255645181|gb|ACU23088.1| unknown [Glycine max]
Length = 208
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
F+ GL+ T+D L+DTF FG+++ AK+V + SG S+GFGFV + +A +AI+ M
Sbjct: 9 CFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDAM 68
Query: 100 DGKFLDGWVIFVEYAKPRQPPT 121
+G LDG I V+ A+P+Q T
Sbjct: 69 NGIDLDGRTITVDRAQPQQGST 90
>gi|432854498|ref|XP_004067930.1| PREDICTED: nucleolin-like isoform 3 [Oryzias latipes]
Length = 694
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P+ LFV GLS+ T+D+TLRD+F V A+IV RE+G SKGFGFV + A
Sbjct: 543 PTKTLFVKGLSEDTSDQTLRDSFEG---AVGARIVTDRETGSSKGFGFVDFDNENDCKAA 599
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
E M+ +DG + ++YAKP+
Sbjct: 600 KEAMEDGEIDGSKVTLDYAKPK 621
>gi|15221825|ref|NP_173298.1| glycine-rich RNA-binding protein 6 [Arabidopsis thaliana]
gi|9795594|gb|AAF98412.1|AC026238_4 Similar to glycine-rich RNA-binding proteins [Arabidopsis thaliana]
gi|29029110|gb|AAO64934.1| At1g18630 [Arabidopsis thaliana]
gi|110743184|dbj|BAE99483.1| hypothetical protein [Arabidopsis thaliana]
gi|332191616|gb|AEE29737.1| glycine-rich RNA-binding protein 6 [Arabidopsis thaliana]
Length = 155
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ +FV GLS T E L++ F +FG++V A +V RESG S+GFGFV Y ++E A A++
Sbjct: 36 SKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQ 95
Query: 98 GMDGKFLDGWVIFVE 112
M K LDG +I V
Sbjct: 96 AMQNKELDGRIIGVH 110
>gi|432854496|ref|XP_004067929.1| PREDICTED: nucleolin-like isoform 2 [Oryzias latipes]
Length = 651
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P+ LFV GLS+ T+D+TLRD+F V A+IV RE+G SKGFGFV + A
Sbjct: 500 PTKTLFVKGLSEDTSDQTLRDSFEG---AVGARIVTDRETGSSKGFGFVDFDNENDCKAA 556
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
E M+ +DG + ++YAKP+
Sbjct: 557 KEAMEDGEIDGSKVTLDYAKPK 578
>gi|296811816|ref|XP_002846246.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
gi|238843634|gb|EEQ33296.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
Length = 133
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GL+ TTD+TLRD FS FG + A +VK R++ S+GFGFV+++ A A+ M
Sbjct: 6 LFIGGLAWHTTDDTLRDGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSNESEADAALNAM 65
Query: 100 DGKFLDGWVIFVEYAKPR 117
+ + DG VI V+ A R
Sbjct: 66 NNQEFDGRVIRVDKATER 83
>gi|357122080|ref|XP_003562744.1| PREDICTED: uncharacterized protein LOC100841917 [Brachypodium
distachyon]
Length = 324
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
S+ LFV GLS T D TL+D FS +G+V A+++ R++G SKGFGF+ Y + EAA A
Sbjct: 30 SSSKLFVGGLSYATDDPTLKDAFSHYGDVCEARVIIDRDTGRSKGFGFITYTSSEAAAAA 89
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
I MDGK L G ++ V YA R
Sbjct: 90 ISAMDGKDLQGRMVKVAYATDR 111
>gi|297620951|ref|YP_003709088.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|297376252|gb|ADI38082.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|337293226|emb|CCB91217.1| putative RNA-binding protein rbpA [Waddlia chondrophila 2032/99]
Length = 92
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L+V LS R +++ +D F++FGEV+ AKI+ R +G SKGFGFV++A EAA +AI+ +
Sbjct: 3 LYVGNLSYRVSEDQFKDYFASFGEVLSAKIITDRFTGQSKGFGFVEFADKEAAEEAIKEL 62
Query: 100 DGKFLDGWVIFVEYAKPRQ--PP 120
+G +G I V AKP + PP
Sbjct: 63 NGSNFEGRSIVVNEAKPMEDRPP 85
>gi|365088445|ref|ZP_09327889.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
gi|363417101|gb|EHL24188.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
Length = 111
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ ++V L TD +L+ FS FG V AK++ RE+G SKGFGFV+ A E A AI
Sbjct: 2 SSKIYVGNLPYSVTDASLQSNFSEFGGVSSAKVMMDRETGRSKGFGFVEMANAEVAQAAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
G+ G +DG I V A+PR+
Sbjct: 62 SGLHGMSVDGRTIVVNLARPRE 83
>gi|20257695|gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T +A AIEGM
Sbjct: 14 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGM 73
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 74 NGKELDGRNITVNEAQS 90
>gi|356544204|ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 364
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVV-HAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLF+ L ++ L DTFSAFG +V + KI++ E+G S+GFGF+ Y + EA+ AIE
Sbjct: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDSAIE 172
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G++L I V YA
Sbjct: 173 AMNGQYLCNRQITVSYA 189
>gi|2267567|gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
Length = 166
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T D L FS +GEVV +KI+ RE+G S+GFGFV ++ ++
Sbjct: 4 ADVEYRCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEKSMN 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AIEGM+G+ LDG I V A+
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
>gi|154413444|ref|XP_001579752.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121913962|gb|EAY18766.1| hypothetical protein TVAG_267990 [Trichomonas vaginalis G3]
Length = 248
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 8/118 (6%)
Query: 4 RAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAE---PSTNLFVSGLSKRTTDETLRDTFSA 60
RAA PR F +P S +RP+++ PSTN+F++ + R T++ LR+ S
Sbjct: 16 RAAFRGPRPQSESFQRTPASG-----RRPRSQVITPSTNVFINYIPPRFTEQDLRNLCSQ 70
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
+GE++ +KI+ + E+G SK FGFVK+ L A AI+ +DG + + +YA+ ++
Sbjct: 71 YGEIISSKIMINLETGQSKCFGFVKFRELSQAHAAIQAIDGMSIGNKRLLAKYAESQE 128
>gi|402217291|gb|EJT97372.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 167
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%)
Query: 42 VSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDG 101
+ LS T D+TLR FS FG+V+ ++K RESG S+GFGFV + T + A AI+G++
Sbjct: 17 IGNLSWNTNDDTLRSAFSQFGQVLDCIVMKDRESGRSRGFGFVTFGTSQEAQAAIDGLNE 76
Query: 102 KFLDGWVIFVEYAKPRQP 119
+ LDG I V A R P
Sbjct: 77 QDLDGRRIRVNLANARPP 94
>gi|374384996|ref|ZP_09642507.1| hypothetical protein HMPREF9449_00893 [Odoribacter laneus YIT
12061]
gi|373227054|gb|EHP49375.1| hypothetical protein HMPREF9449_00893 [Odoribacter laneus YIT
12061]
Length = 100
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++VS LS D LRD F +GE+ AK++ RESG S+GFGFV+ + KAI+
Sbjct: 2 NIYVSNLSYAVNDSDLRDLFGEYGEISSAKVIMDRESGRSRGFGFVEMPSDTEGQKAIDE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQPPTLPSQNNTN 129
++ DG VI V AKPR P NN N
Sbjct: 62 LNQVEYDGKVINVNVAKPR--TDRPRNNNYN 90
>gi|7024451|dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 32 PQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEA 91
A+ FV GL+ TTD +L + FSA+G+++ +KI+ RE+G S+GFGFV + ++
Sbjct: 2 ASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKS 61
Query: 92 AGKAIEGMDGKFLDGWVIFVEYAK 115
AIEGM+G+ LDG I V A+
Sbjct: 62 MRDAIEGMNGQNLDGRNITVNEAQ 85
>gi|20257687|gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
gi|20257713|gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T +A AIEGM
Sbjct: 13 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGM 72
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 73 NGKELDGRNITVNEAQS 89
>gi|20257715|gb|AAM16023.1| glycine-rich RNA binding protein [Zea mays]
gi|20257721|gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T +A AIEGM
Sbjct: 13 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGM 72
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 73 NGKELDGRNITVNEAQS 89
>gi|544426|sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus carota]
gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ T DE+L FS FG++ +KI+ RE+G S+GFGFV + ++
Sbjct: 2 AEVEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIEGM+G+ LDG I V A+
Sbjct: 62 DAIEGMNGQELDGRNITVNEAQS 84
>gi|406950086|gb|EKD80418.1| cp31AHv protein [uncultured bacterium]
Length = 122
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
+T LFV L+ TTD++L+ FS G V A+++ R +G SKGFGFV+ ++ E A KA+
Sbjct: 2 ATKLFVGSLAWATTDDSLQAFFSQAGTVSSARVITDRATGRSKGFGFVEMSSDEEAQKAV 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPT 121
++GK LDG I V A+P +P T
Sbjct: 62 AELNGKELDGRAIVVNEARPMEPRT 86
>gi|198282085|ref|NP_001105572.1| glycine-rich RNA binding protein [Zea mays]
gi|2668742|gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays]
gi|194692162|gb|ACF80165.1| unknown [Zea mays]
gi|195623052|gb|ACG33356.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 145
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T +A AIEGM
Sbjct: 10 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 70 NGKELDGRNITVNEAQS 86
>gi|195618802|gb|ACG31231.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195625478|gb|ACG34569.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T +A AIEGM
Sbjct: 10 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 70 NGKELDGRNITVNEAQS 86
>gi|388567211|ref|ZP_10153648.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
gi|388265594|gb|EIK91147.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
Length = 97
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ L+V L D++LR FS FG V AK++ R+SG SKGFGFV+ A+ A AI
Sbjct: 2 SSKLYVGNLPYSVNDDSLRHNFSEFGNVASAKVMTDRDSGRSKGFGFVEMASEAEAQAAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
G++G+ +DG I V ++P++
Sbjct: 62 NGLNGQSVDGRQIVVNVSRPKE 83
>gi|20257689|gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays]
Length = 147
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T +A AIEGM
Sbjct: 12 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGM 71
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 72 NGKELDGRNITVNEAQS 88
>gi|74179817|dbj|BAE36484.1| unnamed protein product [Mus musculus]
Length = 707
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+++PS LFV GLS+ TT+ETL+++F V A+IV RE+G SKGFGF+ + + E A
Sbjct: 564 RSQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFLDFNSEEDA 620
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 621 KAAKEAMEDGEIDGNKVTLDWAKPK 645
>gi|224059014|ref|XP_002299678.1| predicted protein [Populus trichocarpa]
gi|222846936|gb|EEE84483.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
F+ GLS T+D L++TF FG ++ AK+V + SG S+GFGFV + +A AIEGM
Sbjct: 9 CFIGGLSWSTSDRGLKETFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEDAIEGM 68
Query: 100 DGKFLDGWVIFVEYAKPRQPPT 121
+G LDG I V+ A+P+Q +
Sbjct: 69 NGMDLDGRTITVDKAQPQQGSS 90
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ S NLFV LS +E LR F +FGE+ +I+ RE+G S+GFG+V+YA +A
Sbjct: 221 ADNSPNLFVGNLSWNVDEEWLRREFESFGELSGVRIMTERETGRSRGFGYVEYADASSAK 280
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPR 117
A E LDG I ++YAKPR
Sbjct: 281 AAYEAKKDTELDGRTINLDYAKPR 304
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 33 QAEPSTN-LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEA 91
Q P +N LFV L + +R+ F G++ ++ E+G KG+G+V++++++
Sbjct: 325 QTSPESNTLFVGNLVFGVDENAVREVFEGQGQIQGVRLPTDAETGRPKGYGYVEFSSVDE 384
Query: 92 AGKAIEGMDGKFLDGWVIFVEYAKPR 117
A +A+ + G + G I ++++ PR
Sbjct: 385 ARQALNELQGTDIGGRAIRLDFSTPR 410
>gi|375146472|ref|YP_005008913.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361060518|gb|AEV99509.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 95
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++VS LS DE L+D F+ +GEV AK++ RE+G S+GFGFV+ A+ KAI
Sbjct: 2 NIYVSNLSFDVHDEDLKDFFAPYGEVTSAKVITDRETGRSRGFGFVEMTDEAASKKAIAE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQPPTLPSQNN 127
+DG ++ I V AKP++ P++NN
Sbjct: 62 LDGSTVENRTISVSVAKPKEDR--PARNN 88
>gi|20257711|gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays]
Length = 150
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T +A AIEGM
Sbjct: 15 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGM 74
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 75 NGKELDGRNITVNEAQS 91
>gi|160899081|ref|YP_001564663.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333914782|ref|YP_004488514.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|160364665|gb|ABX36278.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333744982|gb|AEF90159.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 115
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
+T ++V L TD +L F+ FG V AK++ RE+G SKGFGFV+ A+ E A AI
Sbjct: 2 TTKIYVGNLPYSVTDSSLESNFAEFGNVASAKVMMDRETGRSKGFGFVEMASAEVAQAAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
G+ G +DG I V A+PR+
Sbjct: 62 TGLHGMSVDGRSIVVNLARPRE 83
>gi|218184292|gb|EEC66719.1| hypothetical protein OsI_33054 [Oryza sativa Indica Group]
Length = 117
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q + S+ LF+ G+S T D++L++ F+ +GEV+ A+++ R +G S+GFGFV Y +
Sbjct: 23 QAVRCMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTST 82
Query: 90 EAAGKAIEGMDGK 102
+ A AI GMDGK
Sbjct: 83 DEAAAAITGMDGK 95
>gi|348523079|ref|XP_003449051.1| PREDICTED: nucleolin-like isoform 1 [Oreochromis niloticus]
Length = 700
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R + P+ LFV GLS+ TT+ETL+D F V A+IV R++G SKGFGFV ++ +
Sbjct: 540 RGNSGPTKTLFVKGLSEDTTEETLKDAFEG---AVAARIVTDRDTGSSKGFGFVDFSNED 596
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + ++YAKP+
Sbjct: 597 DCKAAKEAMEDGEIDGSKVTLDYAKPK 623
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S L V+ LS T+E L+ TF + V +I + G KGF F+++ + + A A+
Sbjct: 461 SKTLVVNNLSFNATEEVLQSTFE---KAVSIRIPQR--DGRPKGFAFLEFESTDDAKDAL 515
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
E + ++G I +EY++ R
Sbjct: 516 ENFNNTEIEGRSIRLEYSQSRD 537
>gi|346978360|gb|EGY21812.1| glycine-rich RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 175
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ LF+ GL+ TT+ETLR F FG V A +VK R++G S+GFGFV+Y+ E A KAI+
Sbjct: 2 SKLFIGGLAWHTTEETLRSRFEEFGAVDEAVVVKDRDTGRSRGFGFVRYSQDEDAQKAID 61
Query: 98 GMDGKFLDGWVIFVEYA 114
M+ DG I V+ A
Sbjct: 62 AMNNVEFDGRTIRVDRA 78
>gi|255539831|ref|XP_002510980.1| zinc finger protein, putative [Ricinus communis]
gi|223550095|gb|EEF51582.1| zinc finger protein, putative [Ricinus communis]
Length = 798
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
TNL++ L D+ L FSAFG++V AK++K R +G SKG+GFVKY ++ A AI
Sbjct: 496 DTNLYIGYLPPNLDDDGLIGLFSAFGDIVMAKVIKDRVTGVSKGYGFVKYRDIQMANNAI 555
Query: 97 EGMDGKFLDGWVIFVEYA 114
M+G +DG I V A
Sbjct: 556 ASMNGYRIDGRTIAVRVA 573
>gi|33359635|gb|AAQ17065.1| nucleolin 3 [Cyprinus carpio]
gi|33949944|gb|AAQ55855.1| nucleolin [Cyprinus carpio]
Length = 637
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P+ LFV GLS+ TTD +L++ F V+A+IV R++G SKGFGFV + + E A
Sbjct: 486 PTKTLFVKGLSEDTTDHSLKEAFDG---AVNARIVTDRDTGSSKGFGFVDFDSEEDCKAA 542
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
E MD +DG + ++YAKP+
Sbjct: 543 KEAMDDGEIDGNRVTLDYAKPK 564
>gi|348523085|ref|XP_003449054.1| PREDICTED: nucleolin-like isoform 4 [Oreochromis niloticus]
Length = 659
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R + P+ LFV GLS+ TT+ETL+D F V A+IV R++G SKGFGFV ++ +
Sbjct: 499 RGNSGPTKTLFVKGLSEDTTEETLKDAFEG---AVAARIVTDRDTGSSKGFGFVDFSNED 555
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + ++YAKP+
Sbjct: 556 DCKAAKEAMEDGEIDGSKVTLDYAKPK 582
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S L V+ LS T+E L+ TF + V +I + G KGF F+++ + + A A+
Sbjct: 420 SKTLVVNNLSFNATEEVLQSTFE---KAVSIRIPQR--DGRPKGFAFLEFESTDDAKDAL 474
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
E + ++G I +EY++ R
Sbjct: 475 ENFNNTEIEGRSIRLEYSQSRD 496
>gi|20257673|gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays]
Length = 139
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T +A AIEGM
Sbjct: 4 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGM 63
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 64 NGKELDGRNITVNEAQS 80
>gi|224138468|ref|XP_002326610.1| predicted protein [Populus trichocarpa]
gi|222833932|gb|EEE72409.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
TNL++ L D+ L FS+FGE+V AK++K R +G SKG+GFVKY ++ A AI
Sbjct: 425 DTNLYIGYLPPNLDDDGLIGLFSSFGEIVMAKVIKDRITGLSKGYGFVKYRDVQMANNAI 484
Query: 97 EGMDGKFLDGWVIFVEYA 114
M+G +DG I V A
Sbjct: 485 ASMNGYRIDGRTIAVRVA 502
>gi|297844820|ref|XP_002890291.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336133|gb|EFH66550.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 158
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ LFV GLS T E L++ F +FG++V A +V RESG S+GFGFV Y ++E A A++
Sbjct: 36 SKLFVGGLSPATDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEDANNAMQ 95
Query: 98 GMDGKFLDGWVIFV 111
M K LDG +I V
Sbjct: 96 CMHNKELDGRIIGV 109
>gi|348523083|ref|XP_003449053.1| PREDICTED: nucleolin-like isoform 3 [Oreochromis niloticus]
Length = 658
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R + P+ LFV GLS+ TT+ETL+D F V A+IV R++G SKGFGFV ++ +
Sbjct: 498 RGNSGPTKTLFVKGLSEDTTEETLKDAFEG---AVAARIVTDRDTGSSKGFGFVDFSNED 554
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + ++YAKP+
Sbjct: 555 DCKAAKEAMEDGEIDGSKVTLDYAKPK 581
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L V+ LS T+E L+ TF + V +I + G KGF F+++ + + A A+E
Sbjct: 422 LVVNNLSFNATEEVLQSTFE---KAVSIRIPQR--DGRPKGFAFLEFESTDDAKDALENF 476
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
+ ++G I +EY++ R
Sbjct: 477 NNTEIEGRSIRLEYSQSRD 495
>gi|348523081|ref|XP_003449052.1| PREDICTED: nucleolin-like isoform 2 [Oreochromis niloticus]
Length = 706
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R + P+ LFV GLS+ TT+ETL+D F V A+IV R++G SKGFGFV ++ +
Sbjct: 546 RGNSGPTKTLFVKGLSEDTTEETLKDAFEG---AVAARIVTDRDTGSSKGFGFVDFSNED 602
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + ++YAKP+
Sbjct: 603 DCKAAKEAMEDGEIDGSKVTLDYAKPK 629
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S L V+ LS T+E L+ TF + V +I + G KGF F+++ + + A A+
Sbjct: 467 SKTLVVNNLSFNATEEVLQSTFE---KAVSIRIPQR--DGRPKGFAFLEFESTDDAKDAL 521
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
E + ++G I +EY++ R
Sbjct: 522 ENFNNTEIEGRSIRLEYSQSRD 543
>gi|145347251|ref|XP_001418087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578315|gb|ABO96380.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAG 93
E NLF+ L ++ L DTFSAFG V++ KI++ ++G SKGFGFV Y + EA+
Sbjct: 112 EVGANLFIGNLDPDIDEKLLYDTFSAFGVVINTPKIMRDPDNGASKGFGFVAYDSFEASD 171
Query: 94 KAIEGMDGKFLDGWVIFVEYA 114
AIE M+G+FL I V+YA
Sbjct: 172 AAIEAMNGQFLCNKQINVQYA 192
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 55/84 (65%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
+EPS LF+ LS + + +TFS +GE++ +I H E+ KGFG+V+++ +E A
Sbjct: 266 SEPSDTLFLGNLSFNADKDNIYETFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIEDAK 325
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPR 117
KA+EG+ G+++D + ++Y+ PR
Sbjct: 326 KALEGLQGEYIDNRAVRLDYSTPR 349
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
EP+T +FV LS DE L+ F G VV A+++ R + S+G+G+V + A
Sbjct: 168 GEPAT-IFVGRLSWSIDDEWLKKEFEHIGGVVGARVIYERGTDRSRGYGYVDFEDKSYAE 226
Query: 94 KAIEGMDGKFLDGWVIFVEYA 114
KAI+ M GK +DG I V+ +
Sbjct: 227 KAIQEMQGKEIDGRPINVDMS 247
>gi|116781810|gb|ABK22248.1| unknown [Picea sitchensis]
Length = 215
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P FV GLS T+D TL D F FG ++ AK+V R++G S+GFGFV + ++ A
Sbjct: 5 PEYRCFVGGLSWSTSDRTLEDAFHKFGHLIEAKVVVDRDTGRSRGFGFVTFDDKKSMEDA 64
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
I+ M G LDG I V+ A+P+
Sbjct: 65 IDSMHGMSLDGRSITVDRARPK 86
>gi|325279880|ref|YP_004252422.1| RNP-1 like RNA-binding protein [Odoribacter splanchnicus DSM 20712]
gi|324311689|gb|ADY32242.1| RNP-1 like RNA-binding protein [Odoribacter splanchnicus DSM 20712]
Length = 99
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+++SGLS TTD L + FS +GE+ AKI+ RE+G S+GFGFV+ KAI+
Sbjct: 2 NIYISGLSYGTTDADLNELFSEYGEISSAKIISDRETGRSRGFGFVEMTNDTEGQKAIDE 61
Query: 99 MDGKFLDGWVIFVEYAKPR 117
++G D VI V A+PR
Sbjct: 62 LNGAEYDHKVIAVSIARPR 80
>gi|225690511|ref|NP_001070120.2| nucleolin [Danio rerio]
Length = 705
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P+ LFV GLS TTD+TL+D+F + A+I R++G SKGFGFV + + A
Sbjct: 552 PTKTLFVKGLSDDTTDQTLKDSFDG---AIAARIATDRDTGSSKGFGFVDFDNEQDCKAA 608
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
E MD +DG + ++YAKP+
Sbjct: 609 KEAMDDGEIDGNKVTLDYAKPK 630
>gi|190339446|gb|AAI62643.1| Zgc:152810 protein [Danio rerio]
Length = 708
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P+ LFV GLS TTD+TL+D+F + A+I R++G SKGFGFV + + A
Sbjct: 555 PTKTLFVKGLSDDTTDQTLKDSFDG---AIAARIATDRDTGSSKGFGFVDFDNEQDCKAA 611
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
E MD +DG + ++YAKP+
Sbjct: 612 KEAMDDGEIDGNKVTLDYAKPK 633
>gi|115313778|gb|AAI24136.1| Zgc:152810 [Danio rerio]
Length = 704
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P+ LFV GLS TTD+TL+D+F + A+I R++G SKGFGFV + + A
Sbjct: 551 PTKTLFVKGLSDDTTDQTLKDSFDG---AIAARIATDRDTGSSKGFGFVDFDNEQDCKAA 607
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
E MD +DG + ++YAKP+
Sbjct: 608 KEAMDDGEIDGNKVTLDYAKPK 629
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
E ++FV LS DE L+ F+ GEVV A++ R++G SKGFG+V++A +A K
Sbjct: 269 EEVKSIFVGRLSWNVDDEWLKTEFAEAGEVVSARVQMDRQTGKSKGFGYVEFADAASAKK 328
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQPPT 121
A+E M+G+ +DG + ++ A PR PP
Sbjct: 329 AVETMNGREIDGRPVNLDLATPRGPPN 355
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Query: 27 NPPQRPQA------EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKG 80
NP +R +A EPS LFV L+ T + + + F A GEVV+ ++ R+SG KG
Sbjct: 355 NPERRAKAFGDSRSEPSATLFVGNLAFSATQDAVYELFGAVGEVVNVRLPTDRDSGQPKG 414
Query: 81 FGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
FG+V++A +E A KA+ + G +G I ++++ PR
Sbjct: 415 FGYVEFADVETASKALNELGGTDFEGRNIRLDFSAPR 451
>gi|242823058|ref|XP_002488014.1| glycine-rich RNA-binding protein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218712935|gb|EED12360.1| glycine-rich RNA-binding protein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 134
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GL+ TTD+TLR F FG + A ++K R++ S+GFGFV++AT A AI+GM
Sbjct: 4 LFIGGLAWHTTDDTLRQGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFATDAEADAAIDGM 63
Query: 100 DGKFLDGWVIFVEYA 114
+ + DG VI V+ A
Sbjct: 64 NNQEFDGRVIRVDRA 78
>gi|375146726|ref|YP_005009167.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361060772|gb|AEV99763.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 104
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++VS LS DE L+D F+ +GEV AK++ RE+G S+GFGFV+ + A+ KAI
Sbjct: 2 NIYVSNLSFDVQDEDLKDFFAPYGEVTSAKVITDRETGRSRGFGFVEMSDEAASKKAIAE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQPPTLPSQNN 127
+DG ++ I V AKP++ PS+ N
Sbjct: 62 LDGATVENRTISVSVAKPKED--RPSRGN 88
>gi|217071940|gb|ACJ84330.1| unknown [Medicago truncatula]
Length = 211
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
E FV GL+ T+D LRDTF FG++ AK+V + SG S+GFGFV Y +
Sbjct: 4 EDEYRCFVGGLAWSTSDRKLRDTFEKFGKLTEAKVVVDKFSGRSRGFGFVTYDEKKVMED 63
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQ 118
AI+ M+G LDG I V+ A+P+Q
Sbjct: 64 AIDAMNGIDLDGRTITVDRAQPQQ 87
>gi|297838115|ref|XP_002886939.1| hypothetical protein ARALYDRAFT_475645 [Arabidopsis lyrata subsp.
lyrata]
gi|297332780|gb|EFH63198.1| hypothetical protein ARALYDRAFT_475645 [Arabidopsis lyrata subsp.
lyrata]
Length = 782
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 23 SSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFG 82
S+ PP + E TNL++ L D+ L + FS+FGE+V AK++K R +G SKG+G
Sbjct: 449 STPTKPPSKEYDE--TNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYG 506
Query: 83 FVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
FVKYA ++ A A++ M+G +G + V A
Sbjct: 507 FVKYADVQMANTAVQAMNGYRFEGRTLAVRIA 538
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
++ S NLFV LS +E LR F +FGE+ +IV R+SG S+GFG+V++ E A
Sbjct: 260 ESNASANLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDA 319
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPRQ 118
KA E G LDG + ++YA RQ
Sbjct: 320 AKAFEAKKGAELDGRPLNLDYANARQ 345
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S LF+ +S + +++TFS++G + ++ ESG KGFG++++++++ A A+
Sbjct: 369 SDTLFIGNISFGADENAIQETFSSYGTISGIRLPTDPESGRPKGFGYIQFSSVDEARSAL 428
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+ G L G + ++++ PRQ
Sbjct: 429 NELQGSELAGRAMRLDFSTPRQ 450
>gi|125543223|gb|EAY89362.1| hypothetical protein OsI_10866 [Oryza sativa Indica Group]
Length = 324
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 51/83 (61%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P NL+V+GLS R TD L FSA GEV+ A IV + S+GFGFV AT++ A
Sbjct: 18 PGNNLYVTGLSARVTDRDLEKHFSAEGEVIDASIVLDPWTRESRGFGFVTMATVKEADLC 77
Query: 96 IEGMDGKFLDGWVIFVEYAKPRQ 118
I+ +D L+G VI VE AK R+
Sbjct: 78 IKYLDRSVLEGRVITVEKAKRRR 100
>gi|13877739|gb|AAK43947.1|AF370132_1 unknown protein [Arabidopsis thaliana]
Length = 804
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 23 SSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFG 82
S+ PP + E TNL++ L D+ L + FS+FGE+V AK++K R +G SKG+G
Sbjct: 467 STPTKPPSKEYDE--TNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYG 524
Query: 83 FVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
FVKYA ++ A A++ M+G +G + V A
Sbjct: 525 FVKYADVQMANTAVQAMNGYRFEGRTLAVRIA 556
>gi|167383625|ref|XP_001736605.1| cold-inducible RNA-binding protein [Entamoeba dispar SAW760]
gi|165900936|gb|EDR27150.1| cold-inducible RNA-binding protein, putative [Entamoeba dispar
SAW760]
Length = 138
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
T L++ L+ TDE+LR F FG V K+V RES SKGFGFV + E A KAIE
Sbjct: 2 TRLYIGSLAYSVTDESLRAAFEKFGTVTDCKVVTDRESQRSKGFGFVTFEKDEDAKKAIE 61
Query: 98 GMDGKFLDGWVIFVEYAKPRQP 119
M+ + L+G I V+ +KPR+
Sbjct: 62 EMNEQELEGRRIKVDVSKPREE 83
>gi|15241418|ref|NP_199943.1| splicing factor 1 [Arabidopsis thaliana]
gi|30696034|ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana]
gi|79330558|ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana]
gi|8843867|dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana]
gi|23297082|gb|AAN13087.1| unknown protein [Arabidopsis thaliana]
gi|222423074|dbj|BAH19518.1| AT5G51300 [Arabidopsis thaliana]
gi|222423561|dbj|BAH19750.1| AT5G51300 [Arabidopsis thaliana]
gi|332008680|gb|AED96063.1| splicing factor 1 [Arabidopsis thaliana]
gi|332008681|gb|AED96064.1| splicing factor 1 [Arabidopsis thaliana]
gi|332008682|gb|AED96065.1| splicing factor 1 [Arabidopsis thaliana]
Length = 804
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 23 SSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFG 82
S+ PP + E TNL++ L D+ L + FS+FGE+V AK++K R +G SKG+G
Sbjct: 467 STPTKPPSKEYDE--TNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYG 524
Query: 83 FVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
FVKYA ++ A A++ M+G +G + V A
Sbjct: 525 FVKYADVQMANTAVQAMNGYRFEGRTLAVRIA 556
>gi|29893585|gb|AAP06839.1| putative transformer serine/arginine-rich ribonucleoprotein [Oryza
sativa Japonica Group]
gi|125585702|gb|EAZ26366.1| hypothetical protein OsJ_10248 [Oryza sativa Japonica Group]
Length = 324
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 51/83 (61%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P NL+V+GLS R TD L FSA GEV+ A IV + S+GFGFV AT++ A
Sbjct: 18 PGNNLYVTGLSARVTDRDLEKHFSAEGEVIDASIVLDPWTRESRGFGFVTMATVKEADLC 77
Query: 96 IEGMDGKFLDGWVIFVEYAKPRQ 118
I+ +D L+G VI VE AK R+
Sbjct: 78 IKYLDRSVLEGRVITVEKAKRRR 100
>gi|49618989|gb|AAT68079.1| nucleolin [Danio rerio]
Length = 667
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P+ LFV GLS TTD+TL+D+F + A+I R++G SKGFGFV + + A
Sbjct: 514 PTKTLFVKGLSDDTTDQTLKDSFDG---AIAARIATDRDTGSSKGFGFVDFDNEQDCKAA 570
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
E MD +DG + ++YAKP+
Sbjct: 571 KEAMDDGEIDGNKVTLDYAKPK 592
>gi|212722916|ref|NP_001132731.1| uncharacterized protein LOC100194217 [Zea mays]
gi|194695242|gb|ACF81705.1| unknown [Zea mays]
gi|413933459|gb|AFW68010.1| responsive to abscisic acid15 [Zea mays]
Length = 96
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 56/84 (66%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T++E+L + F+++GE++ +K++ RE+G S+GFGFV +++ +
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPR 117
AIE M+GK LDG I V A+ R
Sbjct: 64 DAIENMNGKELDGRNITVNQAQSR 87
>gi|34851124|gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GL+ T ++ L FS FGE++ +KI+ RE+G S+GFGFV ++ +A
Sbjct: 4 AEIEFRCFVGGLAWATDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEKAMR 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AIEGM+G+ LDG I V A+
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 51/75 (68%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV GLS TT+E+L + F+ +G + +++ +E+G S+GFGFVKY E A A++GM
Sbjct: 7 LFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDGM 66
Query: 100 DGKFLDGWVIFVEYA 114
+GK +DG I V+ A
Sbjct: 67 NGKSVDGRTIRVDEA 81
>gi|375108277|ref|ZP_09754538.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374669008|gb|EHR73793.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 167
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L+V L+ DE+L+ FS FG V AK++ RE+G SKGFGFV+ T A AI GM
Sbjct: 5 LYVGNLAYSVRDESLQAAFSQFGTVTSAKVMMDRETGRSKGFGFVEMGTGAEAQAAINGM 64
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
+G+ L+G + V A+PR+
Sbjct: 65 NGQPLEGRAVVVNEARPRE 83
>gi|108707341|gb|ABF95136.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 347
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 51/83 (61%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P NL+V+GLS R TD L FSA GEV+ A IV + S+GFGFV AT++ A
Sbjct: 41 PGNNLYVTGLSARVTDRDLEKHFSAEGEVIDASIVLDPWTRESRGFGFVTMATVKEADLC 100
Query: 96 IEGMDGKFLDGWVIFVEYAKPRQ 118
I+ +D L+G VI VE AK R+
Sbjct: 101 IKYLDRSVLEGRVITVEKAKRRR 123
>gi|108707340|gb|ABF95135.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 346
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 51/83 (61%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P NL+V+GLS R TD L FSA GEV+ A IV + S+GFGFV AT++ A
Sbjct: 40 PGNNLYVTGLSARVTDRDLEKHFSAEGEVIDASIVLDPWTRESRGFGFVTMATVKEADLC 99
Query: 96 IEGMDGKFLDGWVIFVEYAKPRQ 118
I+ +D L+G VI VE AK R+
Sbjct: 100 IKYLDRSVLEGRVITVEKAKRRR 122
>gi|297795935|ref|XP_002865852.1| hypothetical protein ARALYDRAFT_495202 [Arabidopsis lyrata subsp.
lyrata]
gi|297311687|gb|EFH42111.1| hypothetical protein ARALYDRAFT_495202 [Arabidopsis lyrata subsp.
lyrata]
Length = 798
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 23 SSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFG 82
S+ PP + E TNL++ L D+ L + FS+FGE+V AK++K R +G SKG+G
Sbjct: 462 STPTKPPSKEYDE--TNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYG 519
Query: 83 FVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
FVKYA ++ A A++ M+G +G + V A
Sbjct: 520 FVKYADVQMANTAVQAMNGYRFEGRTLAVRIA 551
>gi|397575959|gb|EJK49989.1| hypothetical protein THAOC_31088, partial [Thalassiosira oceanica]
Length = 690
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 15 RLFSTSPFSSSLNPPQR---PQAEPST------NLFVSGLSKRTTDETLRDTFSAFGEVV 65
R + F+ P R Q +PS N+FV L + ++ L DTFS FG ++
Sbjct: 69 RALDSMNFTDIKGKPCRIMWSQRDPSVRRSGVGNIFVKNLHEGIDNKQLYDTFSLFGNIL 128
Query: 66 HAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFV 111
K+V RE+G SKG+G+V Y T EAA AI+ +DG +DG + V
Sbjct: 129 SCKVVCDRETGLSKGYGYVHYETNEAAASAIDKLDGMLIDGKEVQV 174
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L TD+ LRD F G + AKI++ ++ S+GFGFV ++T E A +A+
Sbjct: 352 VNLYVKNLDDAVTDDMLRDEFGGMGTITSAKIMRDAKTNNSRGFGFVCFSTPEDATRAVN 411
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M GK + G I+V A+ R+
Sbjct: 412 EMSGKIVAGKPIYVSLAQRRE 432
>gi|108710322|gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L FS +GE++ +KI+ RE+G S+GFGFV +++ ++ AIEGM
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAK 115
+GK LDG I V A+
Sbjct: 70 NGKELDGRNITVNEAQ 85
>gi|50881454|gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group]
gi|108710320|gb|ABF98115.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|154550663|gb|ABS83497.1| receptor-like serine threonine kinase [Oryza sativa Japonica Group]
gi|169244423|gb|ACA50485.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
Length = 162
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L FS +GE++ +KI+ RE+G S+GFGFV +++ ++ AIEGM
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAK 115
+GK LDG I V A+
Sbjct: 70 NGKELDGRNITVNEAQ 85
>gi|223039621|ref|ZP_03609908.1| RNA-binding region RNP-1 [Campylobacter rectus RM3267]
gi|222879192|gb|EEF14286.1| RNA-binding region RNP-1 [Campylobacter rectus RM3267]
Length = 81
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V LS R T+ L+DTF+ FGEV AKIVK R++ SKGFGFV+ A KAIE
Sbjct: 2 NIYVGNLSYRMTEAELKDTFAPFGEVKRAKIVKDRDTNRSKGFGFVEMENDADALKAIEA 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++ K + G + V +KP++
Sbjct: 62 LNNKEVGGRALRVNESKPKE 81
>gi|449468384|ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
gi|449522522|ref|XP_004168275.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 145
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV+GLS + +L+D FS+FGEV +IV ++SG S+GFGFV +A A A + M
Sbjct: 46 LFVAGLSWSMDERSLKDAFSSFGEVTEVRIVYDKDSGRSRGFGFVNFANGNDAQCAKDAM 105
Query: 100 DGKFLDGWVIFVEYAKPR---QPPTLPSQNNTNFQYGRQ 135
DGK + G + + +A + +P +P +N N GR+
Sbjct: 106 DGKAVLGRPLRISFALDKVRGEPVVVPRLSNINNLVGRR 144
>gi|260825257|ref|XP_002607583.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
gi|229292931|gb|EEN63593.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
Length = 183
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+ EP LFV GLS TT E L TFS +GE+ K++ RE+G S+GFGFV +A A
Sbjct: 4 EKEPG-KLFVGGLSWDTTSEGLESTFSEYGEITDCKVITDRETGRSRGFGFVTFANDSDA 62
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A + MDG LD I V+YA +
Sbjct: 63 ANAKKCMDGTELDSRQIRVDYASKK 87
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV GLS TT+++L + FS +G + ++ RE+G +GFGFVKY E A A+EGM
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDAMEGM 66
Query: 100 DGKFLDGWVIFVEYA 114
+G+ LDG I V A
Sbjct: 67 NGQSLDGRTIRVNEA 81
>gi|20257675|gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T +A AIEGM
Sbjct: 20 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGM 79
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 80 NGKELDGRNITVNEAQS 96
>gi|20257669|gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T +A AIEGM
Sbjct: 20 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGM 79
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 80 NGKELDGRNITVNEAQS 96
>gi|255322500|ref|ZP_05363645.1| RNA-binding region RNP-1 [Campylobacter showae RM3277]
gi|255300408|gb|EET79680.1| RNA-binding region RNP-1 [Campylobacter showae RM3277]
Length = 81
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V LS R T+ L+DTF+ FGEV AKIVK R++ SKGFGFV+ A KAIE
Sbjct: 2 NIYVGNLSYRMTEAELKDTFAPFGEVKRAKIVKDRDTNRSKGFGFVEIENDADALKAIEA 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++ K + G + V +KP++
Sbjct: 62 LNNKEVGGRALRVNESKPKE 81
>gi|257043450|gb|ACV33079.1| glycine-rich RNA-binding protein [Limonium bicolor]
Length = 140
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
S+ LF+ GLS T D++L+D F++FG+V A+++ R +G S+GFGFV+Y E+A A
Sbjct: 33 SSSKLFIGGLSWGTDDQSLKDAFASFGDVTEARVIMDRNTGKSRGFGFVEYNDTESASSA 92
Query: 96 IEGMDGKFLDGWVIFVEYAKPRQP 119
+ MDG+ L+G I V YA R+
Sbjct: 93 MSSMDGQELNGRNIRVSYATERES 116
>gi|356531689|ref|XP_003534409.1| PREDICTED: uncharacterized protein LOC100818518 [Glycine max]
Length = 780
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 46/78 (58%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
TNL++ L D+ L F FGE+V AK++K R SG SKG+GFVKYA + A AI
Sbjct: 464 DTNLYIGYLPPNLDDDGLIQLFQQFGEIVMAKVIKDRMSGLSKGYGFVKYADITMANNAI 523
Query: 97 EGMDGKFLDGWVIFVEYA 114
M+G L+G I V A
Sbjct: 524 LAMNGYRLEGRTIAVRVA 541
>gi|168037600|ref|XP_001771291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677380|gb|EDQ63851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 87
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ TTD+ L F FG+V+ +K++ RE+G S+GFGF+ +A A +AI+ M
Sbjct: 4 CFVGGLAWATTDDRLEQAFRPFGDVIQSKVISDRETGRSRGFGFITFADENAMNEAIKEM 63
Query: 100 DGKFLDGWVIFVEYAKPR 117
+GK LDG I V A+ R
Sbjct: 64 NGKELDGRNITVNQAQSR 81
>gi|452820612|gb|EME27652.1| splicing factor 3B subunit 4 [Galdieria sulphuraria]
Length = 265
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLFV LS+ ++ L DTFSAFG ++ I++ E+G SKG+GF+K+ + EA+ AIE
Sbjct: 111 NLFVGNLSQEVDEKLLYDTFSAFGAIIETPHIMRDPETGESKGYGFIKFDSFEASDAAIE 170
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G+FL + V+YA
Sbjct: 171 TMNGQFLGNNQVTVQYA 187
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 17 FSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESG 76
F T+ F + P +R Q L+V L +R ++E L + G V H I + R +G
Sbjct: 5 FGTTNFYQASQPAERNQ---EATLYVGNLDERVSEELLWELMVQVGPVKHVYIPRDRITG 61
Query: 77 YSKGFGFVKY 86
++G+GFV++
Sbjct: 62 QTQGYGFVEF 71
>gi|351730017|ref|ZP_08947708.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 115
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ ++V L TD L FS FG V AK++ RE+G SKGFGFV+ A+ E A AI
Sbjct: 2 SSKIYVGNLPYSVTDSVLESNFSEFGNVTSAKVMMDRETGRSKGFGFVEMASAEVAQAAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+ G +DG I V A+PR+
Sbjct: 62 SALHGMSVDGRSIVVNLARPRE 83
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV GLS TT+++L + FS +G + ++ RE+G +GFGFVKY E A A+EGM
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDAMEGM 66
Query: 100 DGKFLDGWVIFVEYA 114
+G+ LDG I V A
Sbjct: 67 NGQSLDGRTIRVNEA 81
>gi|393788491|ref|ZP_10376619.1| hypothetical protein HMPREF1068_02899 [Bacteroides nordii
CL02T12C05]
gi|392655108|gb|EIY48753.1| hypothetical protein HMPREF1068_02899 [Bacteroides nordii
CL02T12C05]
Length = 115
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F++GLS +D L + F+ +GEV A+++ RE+G SKG+GFV+ A EA KAI
Sbjct: 2 NIFIAGLSYNISDSDLTELFAEYGEVASARVISDRETGRSKGYGFVEMADEEAGNKAISA 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++ +DG + V A+P++
Sbjct: 62 LNEAEIDGRKLAVSVARPKE 81
>gi|20257691|gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T +A AIEGM
Sbjct: 19 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGM 78
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 79 NGKELDGRNITVNEAQS 95
>gi|20257667|gb|AAM15999.1| glycine-rich RNA binding protein [Zea mays]
gi|20257671|gb|AAM16001.1| glycine-rich RNA binding protein [Zea mays]
gi|20257677|gb|AAM16004.1| glycine-rich RNA binding protein [Zea mays]
gi|20257685|gb|AAM16008.1| glycine-rich RNA binding protein [Zea mays]
gi|20257703|gb|AAM16017.1| glycine-rich RNA binding protein [Zea mays]
gi|20257717|gb|AAM16024.1| glycine-rich RNA binding protein [Zea mays]
gi|20257719|gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T +A AIEGM
Sbjct: 19 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGM 78
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 79 NGKELDGRNITVNEAQS 95
>gi|20257683|gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T +A AIEGM
Sbjct: 19 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGM 78
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 79 NGKELDGRNITVNEAQS 95
>gi|409197867|ref|ZP_11226530.1| RNP-1 like RNA-binding protein [Marinilabilia salmonicolor JCM
21150]
Length = 99
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NLFV+ LS TT E L D F+ +GEVV AK++ RE+G SK FGFV+ +AA KAI+
Sbjct: 2 NLFVAKLSDATTSEDLNDLFAEYGEVVSAKVIMDRETGSSKRFGFVEMKEDDAAQKAIKD 61
Query: 99 MDGKFLDGWVIFVEYAKPR 117
++ D I V+ A+P+
Sbjct: 62 LNECLFDNSPIVVKKARPK 80
>gi|159476562|ref|XP_001696380.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
gi|158282605|gb|EDP08357.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
Length = 396
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEA 91
QA+ NLF+ L ++ L DTFSAFG +V+ KI++ ++G S+GFGFV Y EA
Sbjct: 113 QADVGANLFIGNLDPDVDEKLLYDTFSAFGVIVNTPKIMRDPDTGNSRGFGFVSYDCFEA 172
Query: 92 AGKAIEGMDGKFLDGWVIFVEYA 114
+ AIE M+G++L I V YA
Sbjct: 173 SDAAIEAMNGQYLCNRAITVSYA 195
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
++V L +TT+E + + F+ G VV+ + K R + +G+GFV++ E A AI+ +
Sbjct: 33 VYVGNLDVQTTEELVWELFTQAGPVVNVYMPKDRVTNAHQGYGFVEFKGEEDADYAIKVL 92
Query: 100 D 100
+
Sbjct: 93 N 93
>gi|336272443|ref|XP_003350978.1| hypothetical protein SMAC_04282 [Sordaria macrospora k-hell]
gi|380090745|emb|CCC04915.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 192
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 46/78 (58%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV GLS T D LR F FG V A +VK R++G S+GFGFV+YA A AI M
Sbjct: 4 LFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYANDADAENAIANM 63
Query: 100 DGKFLDGWVIFVEYAKPR 117
DG+ DG + V+ A R
Sbjct: 64 DGQEFDGRRVRVDKASDR 81
>gi|115529229|dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
AE FV GLS T D +L + F+ FGEV +KI+ RE+G S+GFGFV +A ++
Sbjct: 2 AEVEYRCFVGGLSWGTDDRSLAEAFNKFGEVTDSKIINDRETGRSRGFGFVTFANEQSMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AI+ M+GK LDG I V A+
Sbjct: 62 DAIDEMNGKELDGRSITVNEAQ 83
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 55/88 (62%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q ++ S+ LFV GLS T + +L++ FS GEV+ A+++ R++G S+GFGFV + +
Sbjct: 32 QAIRSMSSSKLFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTST 91
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
E A A+ +DG+ L G I V YA +
Sbjct: 92 EEAASALTALDGQDLHGRQIRVNYATEK 119
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ TDE L++ FSAFG+ + ++++ E G S+GFGFV YA E A KA++
Sbjct: 191 TNIYIKNFGDNLTDEKLKEAFSAFGKTLSVRVMRD-EKGRSRGFGFVNYAHHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK ++G +I+V A+ R
Sbjct: 250 EMNGKEMNGKIIYVGRAQKR 269
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ + ++ L DTFSAFG ++ K+V E G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNIDDSIDNKALYDTFSAFGNILSCKVVCD-ERG-SKGYGFVHFETQEAANRAIET 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV + K R+
Sbjct: 158 MNGMLLNDRKVFVGHFKSRK 177
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R Q NL+V L DE LR FS +G + AK++ E+G SKGFGFV +++ E
Sbjct: 287 RIQRYQGVNLYVKNLDDSIDDERLRKEFSPYGTITSAKVMT--EAGQSKGFGFVCFSSPE 344
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
A KA+ M+G+ + ++V A+ R+
Sbjct: 345 EATKAVTEMNGRIVATKPLYVALAQRRE 372
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T +ETL F+ FG+V+ +K++ RE+G S+GFGFV +++ ++
Sbjct: 4 ADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSML 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIE M+GK LDG I V A+
Sbjct: 64 DAIENMNGKELDGRNITVNQAQS 86
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+FV GLS T+E+L++ F + GE+V A++V RE+G S+GFG+V + A A+E
Sbjct: 289 NVFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDAAGAKAALE- 347
Query: 99 MDGKFLDGWVIFVEYAKPRQPPTLP 123
M G LDG I V+ + PR P P
Sbjct: 348 MAGTELDGRTINVDLSAPRPPRDGP 372
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
PS +FV LS +T + + ++FS FG V ++ E+G KGF +V++ +++A KA
Sbjct: 387 PSQTVFVGNLSFESTQDAVWESFSDFGGVNSVRVPTDMETGRPKGFAYVEFGDVDSAKKA 446
Query: 96 IE---GMDGKFLDGWVIFVEYAKPRQP 119
++ +G +DG + +++++PRQP
Sbjct: 447 VDQGRSSEGLEIDGRRVRLDFSQPRQP 473
>gi|357473251|ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 161
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T +E L FS +GE+V +KI+ RE+G S+GFGFV +A ++
Sbjct: 2 ADVEYRCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMN 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AIE M+G+ LDG I V A+
Sbjct: 62 DAIEAMNGQDLDGRNITVNQAQ 83
>gi|19881711|gb|AAM01112.1|AC098682_16 Putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 119
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q + S+ LF+ G+S T D++L++ F+ +GEV+ A+++ R +G S+GFGFV Y +
Sbjct: 23 QAVRCMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTST 82
Query: 90 EAAGKAIEGMDGK 102
+ A AI GMDGK
Sbjct: 83 DEAAAAITGMDGK 95
>gi|212546539|ref|XP_002153423.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210064943|gb|EEA19038.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 135
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GL+ TTD+TLR F FG + A ++K R++ S+GFGFV+++T A AIEGM
Sbjct: 4 LFIGGLAWHTTDDTLRSGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFSTDAEADAAIEGM 63
Query: 100 DGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYGR 134
+ + DG VI V+ R S+ N +GR
Sbjct: 64 NNQDFDGRVIRVD----RASNNASSRGNEGGFHGR 94
>gi|99029149|gb|ABF60862.1| GRSF [Lilium longiflorum]
Length = 207
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 15/111 (13%)
Query: 8 AAPRGLRRLFSTSPFSSSLNPPQRP-QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVH 66
AAPRG R P+RP +++PS ++V L + D L FS G+V+
Sbjct: 105 AAPRGSR--------------PERPRESDPSLRVYVGNLPWQVDDSRLEQLFSEHGKVID 150
Query: 67 AKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
A++V R+SG S+GFGFV AT E AI +DG+ L+G + V A+ R
Sbjct: 151 ARVVYDRQSGRSRGFGFVTLATREEVDDAIAALDGQSLEGRALRVNVAEER 201
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 52 ETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFV 111
E L + F G V A+++ +RE+ S+GFGFV +T+E A +A+E + ++G + V
Sbjct: 43 EKLANLFDKAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAERAVEMLHRYDINGRNLTV 102
Query: 112 EYAKPR 117
A PR
Sbjct: 103 NKAAPR 108
>gi|332030569|gb|EGI70257.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 657
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + ESG SKG+GFV + T EAA K+IE
Sbjct: 122 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVTQD-ESGASKGYGFVHFETEEAANKSIEK 180
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 181 VNGMLLNGKKVYVGKFIPRK 200
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV ++ E A KA+
Sbjct: 318 VNLYVKNLDDTIDDERLRKEFTPFGTITSAKVM--MEEGRSKGFGFVCFSQPEEATKAVT 375
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 376 EMNGRIVGSKPLYVALAQRKE 396
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + TD+ L++ F +G + K++ ++ G S+GFGFV + +A +A+
Sbjct: 214 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMI-KDDGKSRGFGFVAFEDPNSAEQAVL 272
Query: 98 GMDGKFL-DGWVIFVEYAKPR 117
++GK + +G ++V A+ +
Sbjct: 273 DLNGKEIAEGKCMYVGRAQKK 293
>gi|298528142|ref|ZP_07015546.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511794|gb|EFI35696.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL+V L TT+ LRD+F+ FGEV AKI++ RE+G S+GFGFV+ A +AIE
Sbjct: 2 TNLYVGNLPWSTTEAQLRDSFAEFGEVSSAKIIEDRETGRSRGFGFVEMEN--GADEAIE 59
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
++GK G I V AKP++
Sbjct: 60 ALNGKDYGGRSIKVNVAKPKR 80
>gi|355565264|gb|EHH21753.1| hypothetical protein EGK_04889, partial [Macaca mulatta]
Length = 705
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG SP + S +PS LFV GLS+ TT+ETL+++F
Sbjct: 547 AIRLELQGPRG-------SPNARS---------QPSKTLFVKGLSEDTTEETLKESFDG- 589
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A A E + +DG + +++AKP+
Sbjct: 590 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEATEDGEIDGNKVTLDWAKPK 643
>gi|406965367|gb|EKD91001.1| Glycine-rich RNA-binding protein [uncultured bacterium]
Length = 87
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S LFV L D LR+ FS +GE++ A ++K R++G S+GFGFV++A KAI
Sbjct: 5 SKKLFVGSLPWGVDDSGLREAFSKYGEIIQATVLKDRQTGRSRGFGFVEFANDADGDKAI 64
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+ M+G +DG I V A+PR+
Sbjct: 65 QEMNGADMDGRNIVVNEARPRE 86
>gi|365153971|ref|ZP_09350405.1| hypothetical protein HMPREF1019_01088 [Campylobacter sp. 10_1_50]
gi|158605004|gb|EAT99377.3| 31 kDa ribonucleoprotein, (RNA-binding proteinRNP-T) (RNA-binding
protein 1/2/3) (AtRBP33) (RNA-binding proteincp31)
[Campylobacter concisus 13826]
gi|363650683|gb|EHL89770.1| hypothetical protein HMPREF1019_01088 [Campylobacter sp. 10_1_50]
Length = 81
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V LS RTT+ L++ F+ FGEV AKIVK RE+ SKGFGFV+ KAI+
Sbjct: 2 NIYVGNLSYRTTEAELKEAFAQFGEVRRAKIVKDRETDRSKGFGFVEMDDANEGQKAIDA 61
Query: 99 MDGKFLDGWVIFVEYAKPR 117
++ K L G + V A+PR
Sbjct: 62 LNEKELGGRTLRVNEARPR 80
>gi|168024568|ref|XP_001764808.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684102|gb|EDQ70507.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVV-HAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLFV L ++ L DTFSAFG +V + KI++ +SG S+GFGF+ Y + EA+ AIE
Sbjct: 113 NLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDSGNSRGFGFISYDSFEASDSAIE 172
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G++L I V YA
Sbjct: 173 AMNGQYLCNRAITVSYA 189
>gi|406929710|gb|EKD65230.1| RNA-binding protein [uncultured bacterium]
Length = 95
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 50/82 (60%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LFV LS TTDE L FS G+V+ AK + R SG KGFGFV+ AT E A KAI
Sbjct: 2 STRLFVGRLSYGTTDEQLEQHFSQAGKVISAKAIVDRYSGQGKGFGFVEMATAEEAQKAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+ ++ L+ I V A+PR+
Sbjct: 62 QQLNNSNLNDRSIVVNEARPRE 83
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 58/89 (65%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+ PQ+ P+T LF+ LS T++ +R++FS +G++V + R++G KGFG+V+Y +
Sbjct: 273 EAPQSAPTTTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDV 332
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
E A KA+EG++G + G + ++YA R
Sbjct: 333 ETAQKAVEGLNGVEIAGRSLRLDYAGGRD 361
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 28 PPQRPQAEPSTN--LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVK 85
P ++P+ E N +FV LS +E L TF+ G V A+I+ +E+G +KGFG+V
Sbjct: 171 PTKKPKTEEPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVT 230
Query: 86 YATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
+ + +A A+ + G LDG I V+ + P+ P
Sbjct: 231 FESADALTAAM-ALTGTELDGREIRVDVSTPKPP 263
>gi|168061382|ref|XP_001782668.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665828|gb|EDQ52499.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 82
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 54/81 (66%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
+ + +++V GLS +T+ETL+ +F FGEVV KIV R+SG S+GFGFV ++ AA
Sbjct: 2 DDTNSVYVGGLSYGSTEETLKRSFMQFGEVVSVKIVHDRDSGESRGFGFVTFSNPRAATV 61
Query: 95 AIEGMDGKFLDGWVIFVEYAK 115
AI+ MDG+ ++G I V +
Sbjct: 62 AIQDMDGRQIEGRTIRVNEVR 82
>gi|449494871|ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protein B-like [Cucumis
sativus]
Length = 95
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ LF+S LS TT E L++ FS FG + A++++ ++ KGFGFV + + A KA++
Sbjct: 7 SELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKALK 66
Query: 98 GMDGKFLDGWVIFVEYAKPRQPPTLPSQN 126
MDG+ +DG +IFVE+AK + P+ +
Sbjct: 67 AMDGRIVDGRLIFVEFAKTEKHGVDPTSS 95
>gi|429328163|gb|AFZ79923.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 570
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKI 69
PRG + F + + P +PS + + LS TT+E +R+ FS GEVV I
Sbjct: 398 PRGDKGQGGAGKFGRTKSFDSNPNTQPSKEVCIRNLSFHTTEEGMRELFSECGEVVRCHI 457
Query: 70 VKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
K ++SG S G F+ + TLEAA +A+E D +DG + ++YA PR
Sbjct: 458 PKFQDSGKSMGRCFITFTTLEAAARAVE-YDNTAIDGRTVSIQYAFPR 504
>gi|291399204|ref|XP_002715240.1| PREDICTED: poly A binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 644
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L+D FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEIGGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|224149436|ref|XP_002336806.1| predicted protein [Populus trichocarpa]
gi|222836937|gb|EEE75330.1| predicted protein [Populus trichocarpa]
Length = 112
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ LF+ GL D TL++ FS +GEV+ A+++ RE+G S+GFGFV Y + E+A +A
Sbjct: 13 SSKLFIGGLPWSADDHTLKEAFSGYGEVIEARVIMDRETGRSRGFGFVSYDSSESASEAQ 72
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYGR 134
MDG+ L G + V +A+ R P P N ++Q R
Sbjct: 73 SAMDGQELGGRNVRVSFAEERSRP--PRSYNDDYQGNR 108
>gi|392404677|ref|YP_006441289.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390612631|gb|AFM13783.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 141
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V L+ TDE LR F AFG+V KIV+ R++G S+GF FV+ E A A+
Sbjct: 2 NIYVGNLAYNATDEELRSAFEAFGQVTSVKIVRDRDTGRSRGFAFVEMEDGEGAQNAVAE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+GK L G + V A+PR+
Sbjct: 62 MNGKDLKGRNLVVNEARPRE 81
>gi|452851903|ref|YP_007493587.1| RNP-1 like RNA-binding protein [Desulfovibrio piezophilus]
gi|451895557|emb|CCH48436.1| RNP-1 like RNA-binding protein [Desulfovibrio piezophilus]
Length = 87
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S NL+V LS TT++ +R F+ FGEV+ K+++ RE+G +GFGFV+ AG A+
Sbjct: 2 SKNLYVGNLSWSTTEDEVRAAFAEFGEVLSVKLIEDRETGRPRGFGFVEMDD-NGAGDAV 60
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+ +DGK L G I V AKPR+
Sbjct: 61 DALDGKDLGGRNIKVNVAKPRE 82
>gi|449268380|gb|EMC79248.1| Nucleolin [Columba livia]
Length = 648
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S LFV GLS+ TT+ETLR++F + A+IV R++G SKGFGFV +++ E A A
Sbjct: 508 SKTLFVRGLSEDTTEETLRESFEG---SISARIVTDRDTGSSKGFGFVDFSSPEDAKAAK 564
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
E M+ +DG + +++AKP+
Sbjct: 565 EAMEDGEIDGNKVILDFAKPK 585
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV L R T++ ++D F E+ +IV ++E G SKG ++++ T A KA+E
Sbjct: 325 LFVKNLPYRLTEDEMKDVFENALEI---RIVMNKE-GNSKGMAYIEFKTEAEANKALEEK 380
Query: 100 DGKFLDGWVIFVEY 113
G +DG + +++
Sbjct: 381 QGTEIDGRAMVIDF 394
>gi|189306|gb|AAA59954.1| nucleolin [Homo sapiens]
Length = 707
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 22/116 (18%)
Query: 2 ALRAAVAAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAF 61
A+R + PRG +P R Q PS LFV GLS+ TT+ETL+++F
Sbjct: 552 AIRLELQGPRG--------------SPNARSQ--PSKTLFVKGLSEDTTEETLKESFDG- 594
Query: 62 GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
V A+IV RE+G SKGFGFV + + E A +A+E DG+ +DG + +++AKP+
Sbjct: 595 --SVRARIVTDRETGSSKGFGFVDFNSEEDAKEAME--DGE-IDGNKVTLDWAKPK 645
>gi|412988957|emb|CCO15548.1| predicted protein [Bathycoccus prasinos]
Length = 247
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAI 96
N+FV L ++ L DTFSAFG V+ A K+ + ESG S+GFGFV++ + EA+ +AI
Sbjct: 44 ANVFVGNLDAEIDEKMLYDTFSAFGSVITAPKVQRDPESGESRGFGFVQFDSFEASDRAI 103
Query: 97 EGMDGKFLDGWVIFVEYA 114
E M G+FL G I V YA
Sbjct: 104 EAMHGQFLAGKQITVVYA 121
>gi|388566786|ref|ZP_10153228.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
gi|388265964|gb|EIK91512.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
Length = 133
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L+V L DE L+ FSAFG V AK++ RE+G SKGFGFV+ + A AI+GM
Sbjct: 5 LYVGNLPYTVRDEDLQQAFSAFGAVNSAKVMMERETGRSKGFGFVEMGSDSEAQSAIQGM 64
Query: 100 DGKFLDGWVIFVEYAKPRQP 119
+G+ L G + V A+P +P
Sbjct: 65 NGQSLGGRSLVVNEARPMEP 84
>gi|356542092|ref|XP_003539505.1| PREDICTED: uncharacterized protein LOC100800982 isoform 1 [Glycine
max]
gi|356542094|ref|XP_003539506.1| PREDICTED: uncharacterized protein LOC100800982 isoform 2 [Glycine
max]
Length = 780
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L D+ L F FGE+V AK++K R SG SKG+GFVKYA + A AI
Sbjct: 465 TNLYIGYLPPTLDDDGLIQLFQQFGEIVMAKVIKDRMSGLSKGYGFVKYADITMANNAIL 524
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G L+G I V A
Sbjct: 525 AMNGYRLEGRTIAVRVA 541
>gi|302814001|ref|XP_002988685.1| hypothetical protein SELMODRAFT_18499 [Selaginella moellendorffii]
gi|300143506|gb|EFJ10196.1| hypothetical protein SELMODRAFT_18499 [Selaginella moellendorffii]
Length = 135
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GLS TTD L D FS +G V+ AK+V R++ S+GFGFV + + AI+GM
Sbjct: 10 CFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAIDGM 69
Query: 100 DGKFLDGWVIFVEYAKPR 117
GK LDG I V A+P+
Sbjct: 70 HGKDLDGRSITVSKAQPK 87
>gi|351722320|ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
gi|255628821|gb|ACU14755.1| unknown [Glycine max]
Length = 146
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
ST LFV+GLS T + LRD F GE++ K++ +G S+G+GFV++ + A
Sbjct: 55 HSSTKLFVTGLSYDTNEPILRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFVSETTAAA 114
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQN 126
A + M+G+ LDG I V YA + +LP+ +
Sbjct: 115 ARKEMNGQILDGRRIRVSYAHKGERLSLPNNS 146
>gi|148298695|ref|NP_001091823.1| poly A binding protein [Bombyx mori]
gi|111608107|gb|ABH10797.1| poly A binding protein [Bombyx mori]
Length = 603
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+ + E+G SKG+GFV + T EAA K+IE
Sbjct: 91 NVFIKNLDKSIDNKALFDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSIEK 149
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G +++V PR+
Sbjct: 150 VNGMLLNGKMVYVGRFIPRK 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 287 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 344
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 345 EMNGRIVGTKPLYVALAQRKE 365
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + +DE L+D F +G + K++ +++ G S+GFGFV + +AA +A
Sbjct: 183 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVM-YKDDGNSRGFGFVAFEDPDAAERACI 241
Query: 98 GMDGK-FLDGWVIFVEYAKPR 117
++GK ++G ++V A+ +
Sbjct: 242 ELNGKELVEGKPLYVGRAQKK 262
>gi|15221187|ref|NP_177563.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
gi|12324900|gb|AAG52402.1|AC020579_4 putative RNA-binding protein; 37609-36098 [Arabidopsis thaliana]
gi|25083154|gb|AAN72048.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|30023780|gb|AAP13423.1| At1g74230 [Arabidopsis thaliana]
gi|332197447|gb|AEE35568.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
Length = 289
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 15 RLFS--TSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKH 72
RLFS +S ++S + Q + S+ +FV G+S T + LR+ FS +GEVV AKI+
Sbjct: 9 RLFSQTSSHVTASSSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVD 68
Query: 73 RESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
RE+G S+GF FV + + E A A++ +DG+ L G I V YA
Sbjct: 69 RETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYA 109
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
E +TN+FV LS ++ L+ F + GEVV A++V R+S S+GFG+V++A L ++ K
Sbjct: 193 EATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLGSSAK 252
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQP 119
AIE DG +DG I V YA R+P
Sbjct: 253 AIE-KDGSEIDGRAIRVNYATQRKP 276
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 53/86 (61%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
Q+ P+ L++ LS T++ + + F G+V ++ R++G KGFG+V++++++ A
Sbjct: 291 QSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDA 350
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPRQ 118
A++ M+G + G I V++A P+Q
Sbjct: 351 TAALKAMNGAEIAGRAIRVDFAPPKQ 376
>gi|383763833|ref|YP_005442815.1| putative RNA-binding region [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381384101|dbj|BAM00918.1| putative RNA-binding region [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 105
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V LS RTT++ LR TF A+G V A I++ RESG SKGFGFV+ + A AI
Sbjct: 2 NIYVGNLSYRTTEDELRRTFEAYGAVSSASIIRDRESGQSKGFGFVEMPSDSEALAAINA 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++ K + G + V A+PR+
Sbjct: 62 LNDKEVGGRRLKVNQARPRE 81
>gi|255691172|ref|ZP_05414847.1| RNA-binding protein [Bacteroides finegoldii DSM 17565]
gi|260623075|gb|EEX45946.1| hypothetical protein BACFIN_06178 [Bacteroides finegoldii DSM
17565]
Length = 99
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++++GLS RT D L + F+ FGEV AK++ RE+G S+GF FV+ + E KAI+
Sbjct: 2 NIYIAGLSYRTNDADLTNLFAEFGEVSSAKVIMDRETGNSRGFAFVEMTSDEEGQKAIDE 61
Query: 99 MDGKFLDGWVIFVEYAKPR 117
++G D VI V A+PR
Sbjct: 62 LNGVEYDQKVISVSVARPR 80
>gi|47220951|emb|CAG03484.1| unnamed protein product [Tetraodon nigroviridis]
Length = 603
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R + P+ LFV GLS+ TTD++L++ F A V A+IV +E+G SKGFGFV +
Sbjct: 466 RGNSGPTKTLFVKGLSEDTTDQSLKEAFEA---AVAARIVTDKETGSSKGFGFVDFDNEA 522
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
A E MD +DG + ++YAKP+
Sbjct: 523 DCKAAKEAMDDGEIDGSKVTLDYAKPK 549
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S L V+ L+ T+E L+ TF E + + R+ G KGF FV++ T++ A A+
Sbjct: 384 SKTLVVNNLAFSATEEVLQSTF----EKATSIRIPQRD-GRPKGFAFVEFETVKDATDAL 438
Query: 97 EGMDGKFLDGWVIFVEYAK 115
E ++ ++G I +E+++
Sbjct: 439 ESLNNTDIEGRSIRLEFSQ 457
>gi|423302507|ref|ZP_17280529.1| hypothetical protein HMPREF1057_03670 [Bacteroides finegoldii
CL09T03C10]
gi|408470383|gb|EKJ88917.1| hypothetical protein HMPREF1057_03670 [Bacteroides finegoldii
CL09T03C10]
Length = 99
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++++GLS RT D L + F+ FGEV AK++ RE+G S+GF FV+ + E KAI+
Sbjct: 2 NIYIAGLSYRTNDADLTNLFAEFGEVSSAKVIMDRETGKSRGFAFVEMTSDEEGQKAIDE 61
Query: 99 MDGKFLDGWVIFVEYAKPR 117
++G D VI V A+PR
Sbjct: 62 LNGVEYDQKVISVSVARPR 80
>gi|262196624|ref|YP_003267833.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262079971|gb|ACY15940.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 125
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 48/81 (59%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S +FV GLS T D +LR F FG V AK++ R++G S+GFGFV +A A AI
Sbjct: 2 SNKIFVGGLSWDTDDSSLRAAFERFGAVTEAKVITDRDTGRSRGFGFVTFAESGQAAAAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
E MDG LDG I V A+ R
Sbjct: 62 EEMDGVELDGRNIRVNEAQER 82
>gi|449525351|ref|XP_004169681.1| PREDICTED: uncharacterized LOC101205455 [Cucumis sativus]
Length = 778
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L D+ L FS FG++V AK++K R SG SKG+GFVKY+ ++ A AI
Sbjct: 481 TNLYIGYLPPTFDDDGLIRLFSTFGDIVMAKVIKDRVSGLSKGYGFVKYSDIQMANNAIA 540
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G L+G I V A
Sbjct: 541 SMNGYRLEGRTIAVRVA 557
>gi|449458337|ref|XP_004146904.1| PREDICTED: uncharacterized protein LOC101205455 [Cucumis sativus]
Length = 777
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L D+ L FS FG++V AK++K R SG SKG+GFVKY+ ++ A AI
Sbjct: 481 TNLYIGYLPPTFDDDGLIRLFSTFGDIVMAKVIKDRVSGLSKGYGFVKYSDIQMANNAIA 540
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G L+G I V A
Sbjct: 541 SMNGYRLEGRTIAVRVA 557
>gi|225430808|ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
Length = 373
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVV-HAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLFV L ++ L DTFSAFG +V + KI++ ++G S+GFGFV Y + EA+ AIE
Sbjct: 113 NLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIE 172
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G++L I V YA
Sbjct: 173 AMNGQYLCNRQITVSYA 189
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 41 FVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMD 100
+V L + T+E L + F G VV+ + K R + +G+GFV++ + E A AI+ ++
Sbjct: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Query: 101 GKFLDGWVIFVEYA 114
L G I V A
Sbjct: 88 MIKLYGKPIRVNKA 101
>gi|4704605|gb|AAD28176.1|AF109917_1 glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T D +L++ FS +GEVV +KI+ RE+G S+GFGFV + ++
Sbjct: 4 ADVEFRCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMR 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AI+ M+GK LDG I V A+
Sbjct: 64 DAIDAMNGKMLDGRSITVNPAQ 85
>gi|320164028|gb|EFW40927.1| splicing factor 3B subunit 4 [Capsaspora owczarzaki ATCC 30864]
Length = 283
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYAT 88
R + NLF+ L ++ L DTFSAFG ++H KI++ +++G +GFGFV +A+
Sbjct: 90 DRKDIDIGANLFIGNLDTEVDEKMLFDTFSAFGVILHTPKIMRDQQNGNPRGFGFVNFAS 149
Query: 89 LEAAGKAIEGMDGKFLDGWVIFVEYA 114
EA+ AIE M+G++L I V YA
Sbjct: 150 FEASDAAIEAMNGQYLCNRQISVTYA 175
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+V L R D L + F G V H I K R SG +G+GFV+Y T E A
Sbjct: 14 CYVGNLDDRVNDRLLWELFLQAGPVAHVFIPKDRVSGLQQGYGFVEYPTEEDA 66
>gi|357445711|ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 491
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 51/77 (66%)
Query: 41 FVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMD 100
F+ GL+ T+D L+D F +G++V AK+V + SG S+GFGFV + EA +AIE M+
Sbjct: 232 FIGGLAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKEAMEEAIEAMN 291
Query: 101 GKFLDGWVIFVEYAKPR 117
G LDG I V+ A+P+
Sbjct: 292 GIDLDGRTITVDKAQPQ 308
>gi|302809382|ref|XP_002986384.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
gi|300145920|gb|EFJ12593.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
Length = 145
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GLS TTD L D FS +G V+ AK+V R++ S+GFGFV + + AI+GM
Sbjct: 4 CFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAIDGM 63
Query: 100 DGKFLDGWVIFVEYAKPR 117
GK LDG I V A+P+
Sbjct: 64 HGKDLDGRSITVSKAQPK 81
>gi|255550690|ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
gi|223544492|gb|EEF46011.1| spliceosome associated protein, putative [Ricinus communis]
Length = 376
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVV-HAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLF+ L ++ L DTFSAFG +V + KI++ E+G S+GFGF+ Y + +A+ AIE
Sbjct: 113 NLFIGNLDPDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFDASDAAIE 172
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G++L I V YA
Sbjct: 173 AMNGQYLCNRQITVSYA 189
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 41 FVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMD 100
+V L + ++E L + F G VV+ + K R + +G+GFV++ + E A AI+ M+
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKIMN 87
Query: 101 GKFLDGWVIFVEYA 114
L G I V A
Sbjct: 88 MIKLFGKPIRVNKA 101
>gi|338762832|gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
Length = 368
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVV-HAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLF+ L ++ L DTFSAFG +V + KI++ E+G S+GFGF+ Y + EA+ AIE
Sbjct: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIE 172
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G++L I V YA
Sbjct: 173 AMNGQYLCNRQITVSYA 189
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 41 FVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMD 100
+V L + ++E L + F G VV+ + K R + +G+GFV++ + E A AI+ ++
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNSHQGYGFVEFRSEEDADYAIKVLN 87
Query: 101 GKFLDGWVIFVEYA 114
L G I V A
Sbjct: 88 MIKLYGKPIRVNKA 101
>gi|328860868|gb|EGG09973.1| hypothetical protein MELLADRAFT_71116 [Melampsora larici-populina
98AG31]
Length = 382
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVH-AKIVKHRESGYSKGFGFVKYATL 89
R Q + NLF+ L + L DTF+ FG +V AKI ++ +G S G+GFV Y +
Sbjct: 93 RKQVDIGANLFIGNLDVNVDERMLYDTFNTFGTLVQTAKIARNPSTGQSNGYGFVAYESF 152
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
E+A AIE M+G+FL I V+YA
Sbjct: 153 ESADTAIESMNGQFLMNKAITVQYA 177
>gi|20067397|emb|CAC84501.1| putative nucleolin [Triturus carnifex]
Length = 338
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
+E S LFV GLS TT+ETL++ AF V +IV R+SG SKGFGFV ++T E A
Sbjct: 195 SEKSKTLFVRGLSADTTEETLKE---AFDGAVGTRIVTDRDSGASKGFGFVDFSTAEDAS 251
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPRQP 119
A E M+ +DG + VE+A+ ++
Sbjct: 252 AAKEAMEDGEIDGNKVTVEFAQSKRE 277
>gi|443918492|gb|ELU38942.1| splicing factor 3b subunit 4 [Rhizoctonia solani AG-1 IA]
Length = 325
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 21 PFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEV-VHAKIVKHRESGYSK 79
P + + + Q + NLF+ GL + L DTFSAFG + AK+ + SG SK
Sbjct: 83 PIRVNKSSSDKKQLDVGANLFIGGLDLNVDERLLYDTFSAFGVMSTTAKVARDPASGESK 142
Query: 80 GFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
G+GFV Y E+A AIE M+G+FL I V+YA
Sbjct: 143 GYGFVSYTDFESADAAIEAMNGQFLMNKAIQVQYA 177
>gi|384488552|gb|EIE80732.1| hypothetical protein RO3G_05437 [Rhizopus delemar RA 99-880]
Length = 238
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P NLF++GL+ RT L D F +G+V+ A+I+ + S+GFGF++ A E A +A
Sbjct: 59 PGDNLFITGLTIRTNGADLEDIFGKYGKVIKAEIMYDPHTRESRGFGFIRMANAEDAERA 118
Query: 96 IEGMDGKFLDGWVIFVEYAK---PRQP 119
+ G+ G +DG V+ VE AK PR P
Sbjct: 119 LNGVSGTEIDGRVVTVEKAKRSRPRTP 145
>gi|32489985|emb|CAE05015.1| OSJNBa0044M19.2 [Oryza sativa Japonica Group]
Length = 650
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L D L FS FGE+V AK+++ R +G SKG+GFVKY+ + A AI
Sbjct: 307 TNLYIGYLPPTLDDSGLIGLFSQFGEIVMAKVIRDRITGQSKGYGFVKYSDVSQANAAIA 366
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G L+G VI V A
Sbjct: 367 AMNGYHLEGRVIAVRVA 383
>gi|333377706|ref|ZP_08469439.1| hypothetical protein HMPREF9456_01034 [Dysgonomonas mossii DSM
22836]
gi|332883726|gb|EGK04006.1| hypothetical protein HMPREF9456_01034 [Dysgonomonas mossii DSM
22836]
Length = 106
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F++GLS D LRD F+ +GE+ AK++ + +G SKG+GFV+ A KAIE
Sbjct: 2 NIFIAGLSYSINDNDLRDLFNEYGEISSAKVIMDKATGRSKGYGFVELEDNAAGQKAIEE 61
Query: 99 MDGKFLDGWVIFVEYAKPR 117
++G DG I V A+PR
Sbjct: 62 LNGAEYDGRTISVSEARPR 80
>gi|63054583|ref|NP_594001.2| U2 snRNP-associated RNA-binding protein Sap49 [Schizosaccharomyces
pombe 972h-]
gi|26399889|sp|O14102.2|SAP49_SCHPO RecName: Full=Spliceosome-associated protein 49
gi|159883972|emb|CAC19730.2| U2 snRNP-associated RNA-binding protein Sap49 [Schizosaccharomyces
pombe]
Length = 335
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 46/80 (57%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NLFV L + L DTFSA G++V A V E+G SKG+GFV Y + E A AIE
Sbjct: 100 NLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEA 159
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+ +FL I V YA R+
Sbjct: 160 MNNQFLMNKPITVSYAFKRE 179
>gi|20257693|gb|AAM16012.1| glycine-rich RNA binding protein [Zea mays]
Length = 153
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++ +A AIEGM
Sbjct: 17 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXDAMRSAIEGM 76
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 77 NGKELDGRNITVNEAQS 93
>gi|342320413|gb|EGU12353.1| Splicing factor 3b subunit 4 [Rhodotorula glutinis ATCC 204091]
Length = 317
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVH-AKIVKHRESGYSKGFGFVKYATL 89
R Q + NLF+ L + L DTF+AFG +V AKI + +G SKGFGFV Y +
Sbjct: 93 RKQLDIGANLFIGNLDPNIDERMLYDTFTAFGTLVQPAKISRDVGTGASKGFGFVSYDSF 152
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
EAA AIE M+G+FL + V YA
Sbjct: 153 EAADAAIESMNGQFLMNKPVTVSYA 177
>gi|195626882|gb|ACG35271.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 203
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T +A AIEGM
Sbjct: 67 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGM 126
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 127 NGKELDGRNITVNEAQS 143
>gi|393784278|ref|ZP_10372444.1| hypothetical protein HMPREF1071_03312 [Bacteroides salyersiae
CL02T12C01]
gi|392666318|gb|EIY59833.1| hypothetical protein HMPREF1071_03312 [Bacteroides salyersiae
CL02T12C01]
Length = 115
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F++GLS +D L + F+ +GEV A+++ RE+G SKG+GFV+ A EA KAI
Sbjct: 2 NIFIAGLSYNISDSDLTELFAEYGEVASARVISDRETGRSKGYGFVEMADEEAGDKAIAA 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++ +DG + V A+P++
Sbjct: 62 LNEAEVDGRKLAVSVARPKE 81
>gi|168038795|ref|XP_001771885.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676836|gb|EDQ63314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
S+ LF+ GL+ T + TLRD F +FG V KI+ R++G S+GFGFV + + + A A
Sbjct: 43 SSSKLFIGGLAWATDENTLRDAFGSFGTVTDVKIILDRDTGRSRGFGFVNFTSPQEAEVA 102
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
++ MDG+ L G I V+YA +
Sbjct: 103 LQEMDGRELAGRQIRVDYATDK 124
>gi|57899926|dbj|BAD87838.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 203
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GLS T + L+D FS G ++ K++ H +G SKG+GFVK+A+ + A A+ M
Sbjct: 126 LFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHKM 185
Query: 100 DGKFLDGWVIFVEYA 114
G+ +DG I V YA
Sbjct: 186 GGEVIDGRNIRVHYA 200
>gi|326926008|ref|XP_003209198.1| PREDICTED: nucleolin-like [Meleagris gallopavo]
Length = 425
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
+ S LFV GLS+ TT+ETLR++F + A+IV R++G SKGFGFV +++ E A
Sbjct: 290 QQSKTLFVRGLSEDTTEETLRESFEG---SISARIVTDRDTGSSKGFGFVDFSSPEDAKA 346
Query: 95 AIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 347 AKEAMEDGEIDGNKVILDFAKPK 369
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q+ S L V+ LS ++ETL++ F + K+ ++ + G KG+ FV++ T
Sbjct: 193 QKGGERESKTLIVNNLSYAASEETLQELFK---KATSIKMPQNNQ-GRPKGYAFVEFPTA 248
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKP 116
E A +A+ + ++G I +E++ P
Sbjct: 249 EDAKEALNSCNNTEIEGRAIRLEFSSP 275
Score = 35.0 bits (79), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV L R T+E +++ F EV ++V ++E G SKG ++++ T A KA+E
Sbjct: 114 LFVKNLPYRVTEEEMKNVFENALEV---RLVLNKE-GSSKGMAYIEFKTEAEAEKALEEK 169
Query: 100 DGKFLDGWVIFVEY 113
G +DG + ++Y
Sbjct: 170 QGTEVDGRAMVIDY 183
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 58/90 (64%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
+EPS+ LFV LS T++TL +TF+ +G++ ++ RE+G KGF +V+++ +EA+
Sbjct: 140 SEPSSVLFVGNLSWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEASK 199
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPRQPPTLP 123
KA EG G + G I V++++PR P P
Sbjct: 200 KAFEGAAGAEVAGRNIRVDFSQPRDPNGPP 229
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 29 PQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYAT 88
P ++ + +FV LS ++ L F+ GEVV A++ R +G S+GFG+V +AT
Sbjct: 35 PAEEASDATKTIFVGKLSWNVDNDWLAQEFAECGEVVSARVQMDRNTGKSRGFGYVTFAT 94
Query: 89 LEAAGKAIEGMDGKFLDGWVIFVE 112
+EA AI +GK +DG + ++
Sbjct: 95 VEAVDAAI-AQNGKEIDGRAVNID 117
>gi|45384000|ref|NP_990596.1| nucleolin [Gallus gallus]
gi|128840|sp|P15771.1|NUCL_CHICK RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|63711|emb|CAA35060.1| unnamed protein product [Gallus gallus]
Length = 694
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S LFV GLS+ TT+ETLR++F + A+IV R++G SKGFGFV +++ E A A
Sbjct: 552 SKTLFVRGLSEDTTEETLRESFEG---SISARIVTDRDTGSSKGFGFVDFSSPEDAKAAK 608
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
E M+ +DG + +++AKP+
Sbjct: 609 EAMEDGEIDGNKVTLDFAKPK 629
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S L V+ LS ++ETL++ F + K+ ++ + G KG+ FV++ T E A +A+
Sbjct: 460 SKTLIVNNLSYAASEETLQELFK---KATSIKMPQNNQ-GRPKGYAFVEFPTAEDAKEAL 515
Query: 97 EGMDGKFLDGWVIFVEYAKP 116
+ ++G I +E++ P
Sbjct: 516 NSCNNTEIEGRAIRLEFSSP 535
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV L R T++ +++ F EV ++V ++E G SKG ++++ T A KA+E
Sbjct: 373 LFVKNLPYRVTEDEMKNVFENALEV---RLVLNKE-GSSKGMAYIEFKTEAEAEKALEEK 428
Query: 100 DGKFLDGWVIFVEY 113
G +DG + ++Y
Sbjct: 429 QGTEVDGRAMVIDY 442
>gi|378727388|gb|EHY53847.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 179
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GL+ TTDETL + FS FG + A +VK R++ S+GFGFV++AT A +A++ M
Sbjct: 4 LFIGGLAWHTTDETLYEGFSQFGNIEEAVVVKDRDTNRSRGFGFVRFATKAEADEAMQRM 63
Query: 100 DGKFLDGWVIFVEYAK 115
+ DG +I V++A+
Sbjct: 64 NNTQFDGRLIRVDHAQ 79
>gi|356532261|ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 365
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVV-HAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLF+ L ++ L DTFSAFG +V + KI++ ++G S+GFGF+ Y + EA+ AIE
Sbjct: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIE 172
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G++L I V YA
Sbjct: 173 AMNGQYLCNRQITVSYA 189
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 41 FVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMD 100
+V L + ++E L + F G VV+ + K R + +G+GFV++ + E A AI+ ++
Sbjct: 28 YVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAIKVLN 87
Query: 101 GKFLDGWVIFVEYA 114
L G I V A
Sbjct: 88 MIKLYGKPIRVNKA 101
>gi|221065733|ref|ZP_03541838.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|264678761|ref|YP_003278668.1| RNA-binding region RNP-1 [Comamonas testosteroni CNB-2]
gi|220710756|gb|EED66124.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|262209274|gb|ACY33372.1| RNA-binding region RNP-1 [Comamonas testosteroni CNB-2]
Length = 113
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST ++V L TD +LR F+ FG V AK++ RE+G SKGF FV+ + + AI
Sbjct: 2 STKIYVGNLPYSVTDSSLRSNFAEFGTVTSAKVMMDRETGRSKGFAFVEMTSADECQAAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
G+ G +DG I V AKPR+
Sbjct: 62 SGLHGMSVDGRSIVVNLAKPRE 83
>gi|53714011|ref|YP_100003.1| RNA-binding protein [Bacteroides fragilis YCH46]
gi|60682207|ref|YP_212351.1| RNA-binding protein [Bacteroides fragilis NCTC 9343]
gi|265764361|ref|ZP_06092929.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|336410386|ref|ZP_08590866.1| hypothetical protein HMPREF1018_02883 [Bacteroides sp. 2_1_56FAA]
gi|375359004|ref|YP_005111776.1| putative RNA-binding protein [Bacteroides fragilis 638R]
gi|423250510|ref|ZP_17231526.1| hypothetical protein HMPREF1066_02536 [Bacteroides fragilis
CL03T00C08]
gi|423256011|ref|ZP_17236940.1| hypothetical protein HMPREF1067_03584 [Bacteroides fragilis
CL03T12C07]
gi|423271876|ref|ZP_17250846.1| hypothetical protein HMPREF1079_03928 [Bacteroides fragilis
CL05T00C42]
gi|423276340|ref|ZP_17255281.1| hypothetical protein HMPREF1080_03934 [Bacteroides fragilis
CL05T12C13]
gi|423283895|ref|ZP_17262779.1| hypothetical protein HMPREF1204_02317 [Bacteroides fragilis HMW
615]
gi|52216876|dbj|BAD49469.1| putative RNA-binding protein [Bacteroides fragilis YCH46]
gi|60493641|emb|CAH08430.1| putative RNA-binding protein [Bacteroides fragilis NCTC 9343]
gi|263256969|gb|EEZ28315.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301163685|emb|CBW23239.1| putative RNA-binding protein [Bacteroides fragilis 638R]
gi|335945442|gb|EGN07255.1| hypothetical protein HMPREF1018_02883 [Bacteroides sp. 2_1_56FAA]
gi|392650093|gb|EIY43765.1| hypothetical protein HMPREF1067_03584 [Bacteroides fragilis
CL03T12C07]
gi|392652819|gb|EIY46477.1| hypothetical protein HMPREF1066_02536 [Bacteroides fragilis
CL03T00C08]
gi|392696732|gb|EIY89924.1| hypothetical protein HMPREF1079_03928 [Bacteroides fragilis
CL05T00C42]
gi|392697381|gb|EIY90566.1| hypothetical protein HMPREF1080_03934 [Bacteroides fragilis
CL05T12C13]
gi|404580441|gb|EKA85150.1| hypothetical protein HMPREF1204_02317 [Bacteroides fragilis HMW
615]
Length = 122
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F++G+S ++ L + F FGEV+ AKIV RE+G SKGFGFV+ E AI
Sbjct: 2 NIFIAGISYNLSNADLGELFEEFGEVISAKIVMDRETGRSKGFGFVEMPNDEEGNAAIAA 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++ K +DG + V A+PR+
Sbjct: 62 LNEKEIDGKTLAVSVARPRE 81
>gi|6911146|gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ TTD++L + FS +GEV+ +K++ RE+G S+GFGFV + ++ AI GM
Sbjct: 10 CFVGGLAWATTDQSLSEAFSQYGEVLESKVINDRETGRSRGFGFVTFGDEKSMKDAIVGM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+G+ LDG I V A+
Sbjct: 70 NGQTLDGRNITVNEAQS 86
>gi|224060641|ref|XP_002193452.1| PREDICTED: nucleolin [Taeniopygia guttata]
Length = 692
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S LFV GLS+ TT+ETLR++F + A+IV R++G SKGFGFV +++ E A A
Sbjct: 549 SKTLFVRGLSEDTTEETLRESFEG---SISARIVTDRDTGSSKGFGFVDFSSPEDAKAAK 605
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
E M+ +DG + +++AKP+
Sbjct: 606 EAMEDGEIDGNKVTLDFAKPK 626
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q Q ST L V+ LS T+ETL++ F + V G KG+ FV +AT
Sbjct: 447 QENQKGESTTLIVNNLSYAATEETLQEVFKKASSIR----VPQNNQGRPKGYAFVDFATA 502
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKP 116
E A +A+ ++ ++G I +E++ P
Sbjct: 503 EDAKEALNSLNNTEIEGRTIRLEFSSP 529
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ L R T++ +R+ F EV +IV +++ G S+G +V++ T A KA+E
Sbjct: 371 LFLKNLPYRITEDDIREVFENALEV---RIVMNKD-GNSRGMAYVEFKTEAEADKALEEK 426
Query: 100 DGKFLDGWVIFVEY 113
G ++G + +++
Sbjct: 427 QGTEIEGRAVVIDF 440
>gi|401409932|ref|XP_003884414.1| putative splicing factor [Neospora caninum Liverpool]
gi|325118832|emb|CBZ54384.1| putative splicing factor [Neospora caninum Liverpool]
Length = 550
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L ++T+ DTFS FG ++ AKI++ E+G S+GFGFV + T EA+ A+
Sbjct: 117 NIFLGNLDPDVDEKTIYDTFSTFGNILTAKIMRDPETGISRGFGFVSFDTFEASDAALAA 176
Query: 99 MDGKFLDGWVIFVEYA 114
M+G+F+ I V YA
Sbjct: 177 MNGQFICNRPIHVSYA 192
>gi|356508388|ref|XP_003522939.1| PREDICTED: uncharacterized protein LOC100806292 [Glycine max]
Length = 185
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T + L FS +GE+V +K++ RE+G S+GFGFV +A+ +A AIEGM
Sbjct: 10 CFVGGLAWATDSDALEKAFSHYGEIVESKVIIDRETGRSRGFGFVTFASEQAMKDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+G+ LDG I V A+
Sbjct: 70 NGQNLDGRSITVNEAQS 86
>gi|315635463|ref|ZP_07890729.1| RNA-binding protein [Arcobacter butzleri JV22]
gi|315480221|gb|EFU70888.1| RNA-binding protein [Arcobacter butzleri JV22]
Length = 98
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V LS R D+ L F+ FGEV AK++ +E+G SKGF FV+ A +A AIE
Sbjct: 12 NIYVGNLSYRMNDKELETVFAKFGEVKSAKVIMDKETGRSKGFAFVEMADAKAGKDAIEA 71
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G +G + V AKPR+
Sbjct: 72 LNGNDCEGRTLRVNEAKPRE 91
>gi|385808713|ref|YP_005845109.1| RRM domain RNA-binding protein [Ignavibacterium album JCM 16511]
gi|383800761|gb|AFH47841.1| RRM domain RNA-binding protein [Ignavibacterium album JCM 16511]
Length = 83
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 47/82 (57%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST LFV L DETLR+TF G VV AK++K RE+G S+GFGFV+ A AI
Sbjct: 2 STKLFVGSLPWSVDDETLRETFEEHGNVVSAKVIKDRETGRSRGFGFVEMENSADAKSAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
E ++ L G I V AK R
Sbjct: 62 EALNDSELKGRNIVVNEAKSRN 83
>gi|60729607|pir||JC7925 nucleolin - common carp
gi|27804344|gb|AAO22235.1| nucleolin [Cyprinus carpio]
Length = 693
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P+ LFV GLS+ TTD +L++ F V+A+IV RE+G SKGFGFV + + A
Sbjct: 538 PTKTLFVKGLSEDTTDHSLKEAFEG---AVNARIVTDRETGSSKGFGFVDFDSEGDCKAA 594
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
E MD +DG + ++YAKP+
Sbjct: 595 KEAMDDGEIDGNRVTLDYAKPK 616
>gi|169772913|ref|XP_001820925.1| glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40]
gi|238490830|ref|XP_002376652.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
gi|83768786|dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697065|gb|EED53406.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
Length = 125
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
S ++V LS T DE+LR TFS FG V+ A ++K RE+G S+GFGFV ++ A A
Sbjct: 2 SSAKVYVGNLSWNTNDESLRQTFSEFGNVLDAIVMKDRETGRSRGFGFVTFSAQTEADAA 61
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
I G++ + LDG I V A R
Sbjct: 62 IGGLNEQELDGRRIRVNLANAR 83
>gi|168036414|ref|XP_001770702.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678063|gb|EDQ64526.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 165
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GLS TTD+ L + F FG V+ AK++ +E+G+S+GFGFV + + +AIE +
Sbjct: 9 CFVGGLSWNTTDKGLEEEFRHFGNVLEAKVIVDKETGHSRGFGFVNFGDERSMEEAIERL 68
Query: 100 DGKFLDGWVIFVEYAKPR 117
GK LDG I V AKP+
Sbjct: 69 HGKELDGRPITVNRAKPK 86
>gi|449435011|ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 1
[Cucumis sativus]
gi|449435013|ref|XP_004135290.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 2
[Cucumis sativus]
Length = 89
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 53/78 (67%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ LF+S LS TT E L++ FS FG + A++++ ++ KGFGFV + + A KA++
Sbjct: 7 SELFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKALK 66
Query: 98 GMDGKFLDGWVIFVEYAK 115
MDG+ +DG +IFVE+AK
Sbjct: 67 AMDGRIVDGRLIFVEFAK 84
>gi|328767802|gb|EGF77850.1| hypothetical protein BATDEDRAFT_33617 [Batrachochytrium
dendrobatidis JAM81]
Length = 308
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
LF+S L ++ L DTFSAFG + KI ++ E+G SKG+GFV ++T EA+ AIE
Sbjct: 100 LFISNLDMTVDEKALYDTFSAFGMIASTPKISRNPETGESKGYGFVSFSTFEASDAAIEA 159
Query: 99 MDGKFLDGWVIFVEYA 114
M+G+FL I V YA
Sbjct: 160 MNGQFLANRAIAVSYA 175
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
+++V + R TD + + F G VV+ + K R + +G+GFV++ T + A A +
Sbjct: 12 SVYVGNIEDRATDSLIWELFLQAGPVVNVYLPKDRVTQMHQGYGFVEFMTEQDAEYASKV 71
Query: 99 MD 100
M+
Sbjct: 72 MN 73
>gi|307207781|gb|EFN85399.1| Polyadenylate-binding protein 1 [Harpegnathos saltator]
Length = 552
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + ESG SKG+GFV + T EAA K+I+
Sbjct: 100 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQD-ESGASKGYGFVHFETEEAANKSIDK 158
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 159 VNGMLLNGKKVYVGKFIPRK 178
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV ++ E A KA+
Sbjct: 219 VNLYVKNLDDTIDDERLRKEFTPFGTITSAKVM--MEEGRSKGFGFVCFSQPEEATKAVT 276
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 277 EMNGRIVGSKPLYVALAQRKE 297
>gi|254567738|ref|XP_002490979.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|238030776|emb|CAY68699.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|328352488|emb|CCA38887.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 626
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S N+F+ L ++TL DTFS+FG+V+ K+ E+G SKGFGFV Y + EAA AI
Sbjct: 139 SGNIFIKNLDPAIENKTLHDTFSSFGKVLSCKVATD-ENGNSKGFGFVHYESDEAAQAAI 197
Query: 97 EGMDGKFLDGWVIFV 111
E ++G L+G I+V
Sbjct: 198 ENINGMLLNGREIYV 212
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S NLF+ L + D L + F FG + AK++ E+G S+GFGFV +T E A KAI
Sbjct: 335 SVNLFIKNLDESIDDARLEEEFKPFGTITSAKVMLD-ENGKSRGFGFVCLSTPEEATKAI 393
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
M+ + + ++V A+P+
Sbjct: 394 SEMNQRMVANKPLYVALAQPK 414
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+FV +T++ LR+ F ++G + + E G++KGFGFV +A + A KA+E
Sbjct: 233 TNVFVKNFDTESTEDELRELFESYGPITSIHLQVDSE-GHNKGFGFVNFAEHDDAVKAVE 291
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
++ K G ++V A+ +
Sbjct: 292 ALNDKEYKGKPLYVGRAQKK 311
>gi|423256816|ref|ZP_17237739.1| hypothetical protein HMPREF1055_00016 [Bacteroides fragilis
CL07T00C01]
gi|423266219|ref|ZP_17245222.1| hypothetical protein HMPREF1056_02909 [Bacteroides fragilis
CL07T12C05]
gi|387778292|gb|EIK40387.1| hypothetical protein HMPREF1055_00016 [Bacteroides fragilis
CL07T00C01]
gi|392701574|gb|EIY94732.1| hypothetical protein HMPREF1056_02909 [Bacteroides fragilis
CL07T12C05]
Length = 118
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F++G+S ++ L + F FGEV+ AKIV RE+G SKGFGFV+ E AI
Sbjct: 2 NIFIAGISYNLSNADLGELFEEFGEVISAKIVMDRETGRSKGFGFVEMPNDEEGNAAIAA 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++ K +DG + V A+PR+
Sbjct: 62 LNEKEIDGKTLAVSVARPRE 81
>gi|383862667|ref|XP_003706805.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Megachile rotundata]
Length = 630
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + ESG SKG+GFV + T EAA K+I+
Sbjct: 100 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQD-ESGVSKGYGFVHFETEEAANKSIDK 158
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 159 VNGMLLNGKKVYVGKFIPRK 178
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV ++ E A KA+
Sbjct: 296 VNLYVKNLDDSINDERLRREFAPFGTITSAKVM--MEDGRSKGFGFVCFSAPEEATKAVT 353
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 354 EMNGRIIVTKPLYVALAQRKE 374
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + TD+ L++ F +G + K++ ++ G S+GFGFV + +AA +A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVM-IKDDGKSRGFGFVAFEDPDAAEQAVL 250
Query: 98 GMDGKFL-DGWVIFVEYAKPR 117
++GK + +G ++V A+ +
Sbjct: 251 ELNGKEVAEGKCMYVGRAQKK 271
>gi|238010804|gb|ACR36437.1| unknown [Zea mays]
Length = 262
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 21 PFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKG 80
P S PQRP+ + + ++V LS + L + FS GEV+ A+I+ RESG S+G
Sbjct: 161 PRDRSSRSPQRPRGD-ANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRG 219
Query: 81 FGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
FGFV Y + E AI +DG LDG I V A+ + P
Sbjct: 220 FGFVTYGSAEEVENAISNLDGADLDGRQIRVTVAESKPP 258
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
+FV L L F G V +++ + +G S+GFGFV +++E A++
Sbjct: 83 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQF 142
Query: 100 DGKFLDGWVIFVEYAKPRQPP 120
+G LDG + V P PP
Sbjct: 143 NGYVLDGRSLRVNSGPP--PP 161
>gi|383862669|ref|XP_003706806.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Megachile rotundata]
Length = 612
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + ESG SKG+GFV + T EAA K+I+
Sbjct: 100 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQD-ESGVSKGYGFVHFETEEAANKSIDK 158
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 159 VNGMLLNGKKVYVGKFIPRK 178
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV ++ E A KA+
Sbjct: 296 VNLYVKNLDDSINDERLRREFAPFGTITSAKVM--MEDGRSKGFGFVCFSAPEEATKAVT 353
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 354 EMNGRIIVTKPLYVALAQRKE 374
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + TD+ L++ F +G + K++ ++ G S+GFGFV + +AA +A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVM-IKDDGKSRGFGFVAFEDPDAAEQAVL 250
Query: 98 GMDGKFL-DGWVIFVEYAKPR 117
++GK + +G ++V A+ +
Sbjct: 251 ELNGKEVAEGKCMYVGRAQKK 271
>gi|351705901|gb|EHB08820.1| Polyadenylate-binding protein 5 [Heterocephalus glaber]
Length = 382
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+FV L DE L++ FS +G++ K+V+ SG SKGFGFVKY T EAA KA+
Sbjct: 199 TNVFVKNLGDDMNDEKLKELFSEYGQIESVKVVRD-ASGKSKGFGFVKYETHEAAQKAVL 257
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
+ GK +DG V++V A+ +
Sbjct: 258 ELHGKSMDGKVLYVGRAQKK 277
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P +++ L + DE L++ FS+FG + AK++ E G KGFG V +++ E A KA
Sbjct: 300 PGVPIYIKNLDESIDDEKLKEEFSSFGSISRAKVMM--EVGQGKGFGVVCFSSFEEATKA 357
Query: 96 IEGMDGKFLDGWVIFVEYAKPRQ 118
++ M+G+ + + V + R+
Sbjct: 358 VDEMNGRLVGSKALHVTLGQVRR 380
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 28 PPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYA 87
P R + N+F+ L K + L FSAFG ++ K+V + SKG+ +V +
Sbjct: 96 PDDRLRKSGVGNIFIKNLDKSIDNRGLFYLFSAFGNILSCKVVC--DDNGSKGYAYVHFD 153
Query: 88 TLEAAGKAIEGMDGKFLDGWVIFV 111
+L AA +AI M+G L+ ++V
Sbjct: 154 SLAAANRAIWHMNGVRLNNRQVYV 177
>gi|164427760|ref|XP_965121.2| hypothetical protein NCU02736 [Neurospora crassa OR74A]
gi|157071873|gb|EAA35885.2| predicted protein [Neurospora crassa OR74A]
Length = 200
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 45/78 (57%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV GLS T D LR F FG V A +VK R++G S+GFGFV+Y A AI M
Sbjct: 4 LFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGNDADAENAIANM 63
Query: 100 DGKFLDGWVIFVEYAKPR 117
DG+ DG + V+ A R
Sbjct: 64 DGQEFDGRRVRVDKASDR 81
>gi|449459840|ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
gi|449498825|ref|XP_004160645.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
Length = 379
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVV-HAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLF+ L ++ L DTFSAFG +V + KI++ ++G S+GFGF+ Y + EA+ AIE
Sbjct: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G++L I V YA
Sbjct: 173 AMNGQYLCNRQITVSYA 189
>gi|384170966|ref|YP_005552343.1| RNA recognition motif-containing protein [Arcobacter sp. L]
gi|345470576|dbj|BAK72026.1| RNA recognition motif-containing protein [Arcobacter sp. L]
Length = 88
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V LS R D+ L + FS FG V AK++ +E+G SKGFGFV+ A +AIE
Sbjct: 2 NIYVGNLSYRMNDKDLEEIFSKFGAVKSAKVIMDKETGKSKGFGFVEMVESAAGSQAIES 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G +G + V AKPR+
Sbjct: 62 LNGNDCEGRTLRVNEAKPRE 81
>gi|226502460|ref|NP_001151678.1| LOC100285313 [Zea mays]
gi|195648731|gb|ACG43833.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|223972767|gb|ACN30571.1| unknown [Zea mays]
Length = 293
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
+FV GLS TT+ TL TF +G+V+ A++V RE+G S+GFGFV ++ A AI GM
Sbjct: 9 IFVGGLSWNTTERTLERTFGQYGKVIEAQVVVERETGRSRGFGFVTFSEPRAVDAAIRGM 68
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
LDG I V A+PR
Sbjct: 69 HNGELDGRNISVNKAEPRN 87
>gi|449507320|ref|XP_004162998.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 139
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T +L FS +GE+V AKIV RE+G S+GFGFV + EA AIE M
Sbjct: 10 CFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+G LDG I V A+
Sbjct: 70 NGHILDGRNITVNEAQQ 86
>gi|449462238|ref|XP_004148848.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507318|ref|XP_004162997.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 141
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T +L FS +GE+V AKIV RE+G S+GFGFV + EA AIE M
Sbjct: 10 CFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+G LDG I V A+
Sbjct: 70 NGHILDGRNITVNEAQQ 86
>gi|449462236|ref|XP_004148847.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507315|ref|XP_004162996.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 144
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T +L FS +GE+V AKIV RE+G S+GFGFV + EA AIE M
Sbjct: 10 CFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+G LDG I V A+
Sbjct: 70 NGHILDGRNITVNEAQQ 86
>gi|449462234|ref|XP_004148846.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 156
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T +L FS +GE+V AKIV RE+G S+GFGFV + EA AIE M
Sbjct: 10 CFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+G LDG I V A+
Sbjct: 70 NGHILDGRNITVNEAQQ 86
>gi|449462232|ref|XP_004148845.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507311|ref|XP_004162995.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 171
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T +L FS +GE+V AKIV RE+G S+GFGFV + EA AIE M
Sbjct: 10 CFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+G LDG I V A+
Sbjct: 70 NGHILDGRNITVNEAQQ 86
>gi|21388660|dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 178
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ TTD +L + F FGEVV K++ RE+G S+GFGFV +A + +AI+ M
Sbjct: 7 CFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKDM 66
Query: 100 DGKFLDGWVIFVEYA 114
+GK LDG I V A
Sbjct: 67 NGKELDGRNITVNQA 81
>gi|15982739|gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|19699180|gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
Length = 148
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
+P F+ GL+ T+D LRD F +G +V AK+V + SG S+GFGF+ + +A +
Sbjct: 4 DPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQ 118
AI M+G LDG I V+ A+P Q
Sbjct: 64 AIAAMNGMDLDGRTITVDKAQPHQ 87
>gi|425781282|gb|EKV19258.1| hypothetical protein PDIG_04180 [Penicillium digitatum PHI26]
gi|425783364|gb|EKV21218.1| hypothetical protein PDIP_08850 [Penicillium digitatum Pd1]
Length = 162
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ LFV GLS T+D+TLR+ F FGE+ A +VK R + S+GFGFV++AT A A+
Sbjct: 2 SKLFVHGLSWHTSDDTLREGFQQFGEIQEAIVVKDRATLRSRGFGFVRFATDAEADSALG 61
Query: 98 GMDGKFLDGWVIFVEYA--KPRQP 119
M+ + DG VI V+ A +P++P
Sbjct: 62 AMNNQEFDGRVIRVDKAFDRPQRP 85
>gi|168008942|ref|XP_001757165.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691663|gb|EDQ78024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 161
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GLS TTD+ L + F FG V+ AK++ +E+G+S+GFGFV + + +AIE +
Sbjct: 9 CFVGGLSWNTTDKGLEEEFRRFGNVLEAKVIVDKETGHSRGFGFVNFGDERSMDEAIERL 68
Query: 100 DGKFLDGWVIFVEYAKP 116
GK LDG I V AKP
Sbjct: 69 HGKELDGRPITVNRAKP 85
>gi|225461650|ref|XP_002283115.1| PREDICTED: uncharacterized protein LOC100267539 [Vitis vinifera]
Length = 794
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L D+ L FS FG++V AK++K R +G SKG+GFVKY+ ++ A AI
Sbjct: 495 TNLYIGYLPPTLEDDALIRLFSPFGDIVMAKVIKDRVTGLSKGYGFVKYSDVQQANSAIA 554
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G L+G I V A
Sbjct: 555 SMNGYRLEGRTIAVRVA 571
>gi|261351264|gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
Length = 202
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 49/84 (58%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
E F+ LS T+D L+D F FG +V AK+V + SG S+GFGFV + A
Sbjct: 4 EDEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDDKRAMED 63
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQ 118
AIE M+G LDG I V+ A+P+Q
Sbjct: 64 AIEAMNGMDLDGRAITVDKAQPQQ 87
>gi|356538789|ref|XP_003537883.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 140
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D L FS +G +V +KI+ RE+G S+GFGFV +A+ + AIEGM
Sbjct: 10 CFVGGLAWATDDHALEKAFSHYGNIVESKIINDRETGRSRGFGFVTFASENSMKDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAK 115
+G+ LDG I V A+
Sbjct: 70 NGQNLDGRNITVNEAQ 85
>gi|213625217|gb|AAI70091.1| LOC397919 protein [Xenopus laevis]
Length = 704
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S LFV GLS+ TT+ETL++ AF ++A+IV R++G SKGFGFV +++ E A A
Sbjct: 552 SKTLFVRGLSEDTTEETLKE---AFDGSINARIVTDRDTGASKGFGFVDFSSAEDAKAAR 608
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
E M+ +DG + +++AKP+
Sbjct: 609 EAMEDGEIDGNKVTLDFAKPK 629
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L V+ LS T+++LR+ F + +I +++ G +KGF FV+++++E A +A++
Sbjct: 467 LVVNNLSYSATEDSLREVFE---KATSIRIPQNQ--GRAKGFAFVEFSSMEDAKEAMDSC 521
Query: 100 DGKFLDGWVIFVEYA 114
+ ++G I +E++
Sbjct: 522 NNTEVEGRSIRLEFS 536
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 22 FSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVK--HRESGYSK 79
F + N + + + T LFV + T+ E L++ F +AK ++ G +K
Sbjct: 360 FDKNKNAENKKERDSRT-LFVKNIPYSTSAEELQEIFE------NAKDIRIPTGNDGSNK 412
Query: 80 GFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEY 113
G +V+++T A KA+E G ++G +FV++
Sbjct: 413 GIAYVEFSTEAEANKALEEKQGAEIEGRSLFVDF 446
>gi|195621182|gb|ACG32421.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV L+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T +A AIEGM
Sbjct: 10 CFVGXLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 70 NGKELDGRNITVNEAQS 86
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T +ETL F+ FG+V+ +K++ RE+G S+GFGFV +++ ++
Sbjct: 4 ADVEYRCFVGGLAWATNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSSEQSML 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIE M+GK LDG I V A+
Sbjct: 64 DAIENMNGKELDGRNITVNQAQS 86
>gi|20257681|gb|AAM16006.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++ A AIEGM
Sbjct: 13 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEGM 72
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 73 NGKELDGRNITVNEAQS 89
>gi|384486188|gb|EIE78368.1| hypothetical protein RO3G_03072 [Rhizopus delemar RA 99-880]
Length = 499
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L + L DTFSAFG ++ KI H E G SKG+GFV Y TLEAA AI+
Sbjct: 117 NIFIKNLDPSIDHKALHDTFSAFGNILSCKIA-HDEQGNSKGYGFVHYETLEAAESAIKS 175
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+ +FV + R+
Sbjct: 176 VNGMLLNDRKVFVGHHISRK 195
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L D+ LRD FS +G + AKI++ ++ S+GFGFV + + E A +A+
Sbjct: 312 VNLYVKNLDDDMDDDRLRDEFSVYGVITSAKIMRDEKTNISRGFGFVCFTSPEDATRAVT 371
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + I+V A+ ++
Sbjct: 372 EMNGRIIGSKPIYVAIAQRKE 392
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + TDE L F +G + I + + G SKGFGFV + + A A++
Sbjct: 209 TNIYVKNIPFDVTDEELSQLFGKYGTITSCVITRD-DDGTSKGFGFVNFEKHQDAQNAVD 267
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
+ K G ++V A+ +
Sbjct: 268 DLHKKDFRGQDLYVSRAQKK 287
>gi|332030568|gb|EGI70256.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 678
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + ESG SKG+GFV + T EAA K+I+
Sbjct: 143 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQD-ESGASKGYGFVHFETEEAANKSIDK 201
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 202 VNGMLLNGKKVYVGKFIPRK 221
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV ++ E A KA+
Sbjct: 339 VNLYVKNLDDTIDDERLRKEFTPFGTITSAKVM--MEEGRSKGFGFVCFSQPEEATKAVT 396
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 397 EMNGRIVGSKPLYVALAQRKE 417
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + T++ L+D F +G + K++ ++ G S+GFGFV + +AA +A+
Sbjct: 235 TNVYVKNFGEDMTEDKLKDMFEKYGTITSHKVMS-KDDGKSRGFGFVAFEDPDAAEQAVL 293
Query: 98 GMDGKFL-DGWVIFVEYAKPR 117
++GK + +G ++V A+ +
Sbjct: 294 ELNGKEIAEGKCMYVGRAQKK 314
>gi|162463657|ref|NP_001105707.1| glycine-rich protein1 [Zea mays]
gi|22293|emb|CAA43431.1| glycine-rich protein [Zea mays]
Length = 155
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++T E IEGM
Sbjct: 10 CFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEERMRNRIEGM 69
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 70 NGKELDGRNITVNEAQS 86
>gi|168034546|ref|XP_001769773.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678882|gb|EDQ65335.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 36 PSTNLFV-SGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
S+ LF+ +GL+ T + TLRD FS+FG V KI+ R++G S+GFGFV + + E A
Sbjct: 43 SSSKLFIGAGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEV 102
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQPPT 121
A++ MDG+ L G I V+YA + T
Sbjct: 103 ALQEMDGRELAGRQIRVDYATDKARET 129
>gi|332529248|ref|ZP_08405212.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
gi|332041471|gb|EGI77833.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
Length = 110
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ L+V LS D+ L+ F AFG+V AK++ R+SG SKGFGFV+ + + A AI
Sbjct: 2 SSKLYVGNLSYSVRDDDLQQQFGAFGDVQSAKVMMDRDSGRSKGFGFVEMGSADQAEAAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPT 121
G+ G+ + G + V A+P +P T
Sbjct: 62 RGLHGQNVGGRDMVVNIARPMEPRT 86
>gi|88911212|gb|ABD58896.1| chloroplast single strand DNA binding protein [Mesostigma viride]
Length = 299
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST L+V L+ DE L FS FGEV A++V RESG S+GF FV A+ +AA KA
Sbjct: 89 STKLYVGNLAWSCDDEMLNQAFSQFGEVKAAEVVLDRESGRSRGFAFVTMASPDAAEKAR 148
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
G+DG L G I V + +P+
Sbjct: 149 RGLDGTELAGRAIRVNFPQPK 169
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A + L+V L D L D F FG V +A++V R+SG S+GF FV +T E A
Sbjct: 199 EAGDANRLYVGNLPWSMDDGMLEDLFMEFGTVNYARVVMDRDSGRSRGFAFVALSTPEEA 258
Query: 93 GKAIEGMDGKFLDGWVIFVEYA 114
+A+ +DG+ + G I V A
Sbjct: 259 NEAMANLDGEEIGGRTIRVNLA 280
>gi|148226518|ref|NP_001081557.1| nucleolin [Xenopus laevis]
gi|295899|emb|CAA51460.1| nucleolin [Xenopus laevis]
Length = 705
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S LFV GLS+ TT+ETL++ F ++A+IV R++G SKGFGFV +++ E A A
Sbjct: 553 SKTLFVRGLSEDTTEETLKEAFDG---SINARIVTDRDTGASKGFGFVDFSSAEDAKAAR 609
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
E M+ +DG + +++AKP+
Sbjct: 610 EAMEDGEIDGNKVTLDFAKPK 630
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L V+ LS T+++LR+ F + +I +++ G +KGF FV+++++E A +A++
Sbjct: 468 LVVNNLSYSATEDSLREVFE---KATSIRIPQNQ--GRAKGFAFVEFSSMEDAKEAMDSC 522
Query: 100 DGKFLDGWVIFVEYA 114
+ ++G I +E++
Sbjct: 523 NNTEVEGRSIRLEFS 537
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 22 FSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVK--HRESGYSK 79
F + N + + + T LFV + T+ E L++ F +AK ++ G +K
Sbjct: 361 FDKNKNAENKKERDSRT-LFVKNIPYSTSAEELQEIFE------NAKDIRIPTGNDGSNK 413
Query: 80 GFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEY 113
G +V+++T A KA+E G ++G +FV++
Sbjct: 414 GIAYVEFSTEAEANKALEEKQGAEIEGRSLFVDF 447
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
++V LS TTD+TLRD F FG+V+ + ++K RE+G S+GFGFV ++T E A +I+ M
Sbjct: 6 VYVGNLSWNTTDDTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEISIQQM 65
Query: 100 DGKFLDGWVIFVEYAKPR 117
+ + LDG I V A +
Sbjct: 66 NEQPLDGRNIRVNMANAK 83
>gi|157736330|ref|YP_001489013.1| RNA recognition motif-containing protein [Arcobacter butzleri
RM4018]
gi|384154771|ref|YP_005537586.1| RNA recognition motif-containing protein [Arcobacter butzleri ED-1]
gi|157698184|gb|ABV66344.1| RNA-binding region RNP-1 (RNA recognition motif) [Arcobacter
butzleri RM4018]
gi|345468325|dbj|BAK69776.1| RNA recognition motif-containing protein [Arcobacter butzleri ED-1]
Length = 98
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V LS R D+ L F+ FGEV AK++ +E+G SKGF FV+ A +A AIE
Sbjct: 12 NIYVGNLSYRMNDKELETVFAKFGEVKSAKVIMDKETGRSKGFAFVEMADAKAGKDAIEA 71
Query: 99 MDGKFLDGWVIFVEYAKPRQP 119
++G +G + V AKPR+
Sbjct: 72 LNGNDCEGRTLRVNEAKPREE 92
>gi|125590156|gb|EAZ30506.1| hypothetical protein OsJ_14553 [Oryza sativa Japonica Group]
Length = 684
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L D L FS FGE+V AK+++ R +G SKG+GFVKY+ + A AI
Sbjct: 339 TNLYIGYLPPTLDDSGLIGLFSQFGEIVMAKVIRDRITGQSKGYGFVKYSDVSQANAAIA 398
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G L+G VI V A
Sbjct: 399 AMNGYHLEGRVIAVRVA 415
>gi|297839301|ref|XP_002887532.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
gi|297333373|gb|EFH63791.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
Length = 292
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 15 RLFS--TSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKH 72
R+FS +S ++S + Q + S+ +FV G+S T + LR+ FS +GEVV AKI+
Sbjct: 9 RIFSQTSSHVTASSSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVD 68
Query: 73 RESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
RE+G S+GF FV + + E A A++ +DG+ L G I V YA
Sbjct: 69 RETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYA 109
>gi|357473273|ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 164
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T E L FS +GE++ +KI+ RE+G S+GFGFV +A ++
Sbjct: 4 ADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMR 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIEGM+G+ +DG I V A+
Sbjct: 64 DAIEGMNGQDMDGRNITVNEAQS 86
>gi|255568699|ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 126
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Query: 14 RRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHR 73
R L S + +++L+ P P++ LFV+GLS +++L+D FS+FGEV +I+ +
Sbjct: 3 RALISVAKRATTLH--NSPSPPPNSKLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDK 60
Query: 74 ESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
+SG S+GFGFV ++ A A + MDGK L G + + +A
Sbjct: 61 DSGRSRGFGFVNFSKENEAVCAKDAMDGKALLGRPLRISFA 101
>gi|116197981|ref|XP_001224802.1| hypothetical protein CHGG_07146 [Chaetomium globosum CBS 148.51]
gi|88178425|gb|EAQ85893.1| hypothetical protein CHGG_07146 [Chaetomium globosum CBS 148.51]
Length = 374
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P +NLFV+G+ R + + F +GEV +I+K SG S+GFGFVK T E A A
Sbjct: 68 PGSNLFVTGIHPRLEESEITRLFEKYGEVEKCQIMKDPHSGESRGFGFVKMVTSEMADAA 127
Query: 96 IEGMDGKFLDGWVIFVEYA---KPRQP 119
IEG+ G+ ++G + +E A +PR P
Sbjct: 128 IEGLRGEVIEGRTLNIEKARRVRPRTP 154
>gi|407940456|ref|YP_006856097.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407898250|gb|AFU47459.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 116
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ ++V L TD TL F+ FG V AK++ RE+G SKGFGFV+ A E A AI
Sbjct: 2 SSKIYVGNLPYSVTDATLESNFAEFGGVSSAKVMMDRETGRSKGFGFVEMANAEVAQAAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+ G +DG I V A+PR+
Sbjct: 62 RALHGMSVDGRSIVVNLARPRE 83
>gi|125548044|gb|EAY93866.1| hypothetical protein OsI_15642 [Oryza sativa Indica Group]
Length = 684
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L D L FS FGE+V AK+++ R +G SKG+GFVKY+ + A AI
Sbjct: 339 TNLYIGYLPPTLDDSGLIGLFSQFGEIVMAKVIRDRITGQSKGYGFVKYSDVSQANAAIA 398
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G L+G VI V A
Sbjct: 399 AMNGYHLEGRVIAVRVA 415
>gi|350408504|ref|XP_003488426.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
impatiens]
Length = 630
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + ESG SKG+GFV + T EAA K+I+
Sbjct: 100 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQD-ESGVSKGYGFVHFETEEAANKSIDR 158
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 159 VNGMLLNGKKVYVGKFIPRK 178
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV ++ E A KA+
Sbjct: 296 VNLYVKNLDDSIDDERLRKEFAPFGTITSAKVM--MEEGRSKGFGFVCFSAPEEATKAVT 353
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 354 EMNGRIIVTKPLYVALAQRKE 374
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + TD+ L+D F +G + K++ ++ G S+GFGFV + +AA +A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKDMFEKYGTITSHKVM-IKDDGKSRGFGFVAFEDPDAAEQAVL 250
Query: 98 GMDGKFL-DGWVIFVEYAKPR 117
++GK + +G ++V A+ +
Sbjct: 251 ELNGKEVAEGKCMYVGRAQKK 271
>gi|307165845|gb|EFN60208.1| Polyadenylate-binding protein 1 [Camponotus floridanus]
Length = 635
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + ESG SKG+GFV + T EAA K+I+
Sbjct: 100 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQD-ESGASKGYGFVHFETEEAANKSIDK 158
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 159 VNGMLLNGKKVYVGKFIPRK 178
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV ++ E A KA+
Sbjct: 296 VNLYVKNLDDTIDDERLRKEFTPFGTITSAKVM--MEEGRSKGFGFVCFSQPEEATKAVT 353
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 354 EMNGRIVGSKPLYVALAQRKE 374
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + TD+ L++ F +G + K++ ++ G S+GFGFV + +AA +A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMS-KDDGKSRGFGFVAFEDPDAAEQAVL 250
Query: 98 GMDGKFL-DGWVIFVEYAKPR 117
++GK + +G ++V A+ +
Sbjct: 251 ELNGKDISEGKCMYVGRAQKK 271
>gi|194337130|ref|YP_002018924.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309607|gb|ACF44307.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 90
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+++ L+ T++ LRD FS FG+V A I+ + SG SKGFGFV A +AIE
Sbjct: 2 NIYIGNLAYTVTEDDLRDAFSEFGQVESASIINDKFSGRSKGFGFVDMPNESEAREAIES 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+ K L+G I V AKPR+
Sbjct: 62 MNEKDLNGRTIKVNEAKPRE 81
>gi|380019828|ref|XP_003693803.1| PREDICTED: polyadenylate-binding protein 1-like [Apis florea]
Length = 630
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + ESG SKG+GFV + T EAA K+I+
Sbjct: 100 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQD-ESGVSKGYGFVHFETEEAANKSIDR 158
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 159 VNGMLLNGKKVYVGKFIPRK 178
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV ++ E A KA+
Sbjct: 296 VNLYVKNLDDSIDDERLRKEFAPFGTITSAKVM--MEEGRSKGFGFVCFSAPEEATKAVT 353
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 354 EMNGRIIVTKPLYVALAQRKE 374
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + TD+ L++ F +G + K++ ++ G S+GFGFV + +AA +A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVM-IKDDGKSRGFGFVAFEDPDAAEQAVL 250
Query: 98 GMDGKFL-DGWVIFVEYAKPR 117
++GK + +G ++V A+ +
Sbjct: 251 ELNGKEVAEGKCMYVGRAQKK 271
>gi|78186885|ref|YP_374928.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78166787|gb|ABB23885.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 90
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 48/80 (60%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V L +++ LRD FS FGEV A I+ + SG SKGFGFV+ +AA +AIE
Sbjct: 2 NIYVGNLPYTISEDDLRDAFSEFGEVASANIITDKFSGRSKGFGFVEMPDDDAAREAIES 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M K G I V AKPR+
Sbjct: 62 MHNKDFKGRSIMVNEAKPRE 81
>gi|297802026|ref|XP_002868897.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
gi|297314733|gb|EFH45156.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
Length = 164
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 50/82 (60%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
+E FV GL+ T D L TFS FG+V+ +KI+ RE+G S+GFGFV + +A
Sbjct: 2 SEVEYRCFVGGLAWATQDHDLERTFSQFGDVLDSKIINDRETGRSRGFGFVTFKDEKAMR 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AIE M+GK LDG I V A+
Sbjct: 62 DAIEEMNGKELDGRTITVNEAQ 83
>gi|313147463|ref|ZP_07809656.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|423277773|ref|ZP_17256687.1| hypothetical protein HMPREF1203_00904 [Bacteroides fragilis HMW
610]
gi|424663907|ref|ZP_18100944.1| hypothetical protein HMPREF1205_04293 [Bacteroides fragilis HMW
616]
gi|313136230|gb|EFR53590.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404577597|gb|EKA82335.1| hypothetical protein HMPREF1205_04293 [Bacteroides fragilis HMW
616]
gi|404586970|gb|EKA91529.1| hypothetical protein HMPREF1203_00904 [Bacteroides fragilis HMW
610]
Length = 122
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F++G+S ++ L + F FGEV+ AKIV RE+G SKGFGFV+ E AI
Sbjct: 2 NIFIAGISYNLSNADLGELFEEFGEVISAKIVMDRETGRSKGFGFVEMPNDEEGNAAIAA 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++ K +DG + V A+PR+
Sbjct: 62 LNEKEIDGKTLSVSVARPRE 81
>gi|340719918|ref|XP_003398391.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
terrestris]
Length = 630
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + ESG SKG+GFV + T EAA K+I+
Sbjct: 100 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQD-ESGVSKGYGFVHFETEEAANKSIDR 158
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 159 VNGMLLNGKKVYVGKFIPRK 178
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV ++ E A KA+
Sbjct: 296 VNLYVKNLDDSIDDERLRKEFAPFGTITSAKVM--MEEGRSKGFGFVCFSAPEEATKAVT 353
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 354 EMNGRIIVTKPLYVALAQRKE 374
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + TD+ L++ F +G + K++ ++ G S+GFGFV + +AA +A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVM-IKDDGKSRGFGFVAFEDPDAAEQAVL 250
Query: 98 GMDGKFL-DGWVIFVEYAKPR 117
++GK + +G ++V A+ +
Sbjct: 251 ELNGKEVAEGKCMYVGRAQKK 271
>gi|168035555|ref|XP_001770275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678492|gb|EDQ64950.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ TTD +L + F FGEVV K++ RE+G S+GFGFV +A + +AI+ M
Sbjct: 4 CFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKDM 63
Query: 100 DGKFLDGWVIFVEYA 114
+GK LDG I V A
Sbjct: 64 NGKELDGRNITVNQA 78
>gi|409082711|gb|EKM83069.1| hypothetical protein AGABI1DRAFT_118461 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200576|gb|EKV50500.1| hypothetical protein AGABI2DRAFT_183573 [Agaricus bisporus var.
bisporus H97]
Length = 296
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEV-VHAKIVKHRESGYSKGFGFVKYATL 89
+ Q + NLF+ L + + L DTFSAFG + AKI + SG SKG+GFV Y
Sbjct: 92 KKQLDVGANLFIGNLDENVDERLLYDTFSAFGMMATTAKIARDTGSGISKGYGFVSYTDF 151
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
E++ AIE M+G+FL I V+YA
Sbjct: 152 ESSDAAIESMNGQFLMNKAITVQYA 176
>gi|350408506|ref|XP_003488427.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
impatiens]
Length = 621
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + ESG SKG+GFV + T EAA K+I+
Sbjct: 100 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQD-ESGVSKGYGFVHFETEEAANKSIDR 158
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 159 VNGMLLNGKKVYVGKFIPRK 178
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV ++ E A KA+
Sbjct: 296 VNLYVKNLDDSIDDERLRKEFAPFGTITSAKVM--MEEGRSKGFGFVCFSAPEEATKAVT 353
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 354 EMNGRIIVTKPLYVALAQRKE 374
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + TD+ L+D F +G + K++ ++ G S+GFGFV + +AA +A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKDMFEKYGTITSHKVM-IKDDGKSRGFGFVAFEDPDAAEQAVL 250
Query: 98 GMDGKFL-DGWVIFVEYAKPR 117
++GK + +G ++V A+ +
Sbjct: 251 ELNGKEVAEGKCMYVGRAQKK 271
>gi|170590788|ref|XP_001900153.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
gi|158592303|gb|EDP30903.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
Length = 375
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
N+FV L ++ L DTFSAFG ++ KI++ E+G SKGF FV +A+ EA+ AIE
Sbjct: 101 NVFVGNLDPEVDEKLLFDTFSAFGVILQVPKIMRDAETGXSKGFAFVNFASFEASDSAIE 160
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G+FL I V YA
Sbjct: 161 AMNGQFLCNRAITVSYA 177
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
++V GL ++ TD L + F G VV + K R + +GFGF+++ E A AI+ M
Sbjct: 15 IYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKIM 74
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
+ L G I V A +
Sbjct: 75 NMIKLYGKPIKVNKASAHE 93
>gi|112994|sp|P10979.1|GRPA_MAIZE RecName: Full=Glycine-rich RNA-binding, abscisic acid-inducible
protein
gi|22313|emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
gi|195605904|gb|ACG24782.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195617536|gb|ACG30598.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195620254|gb|ACG31957.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637320|gb|ACG38128.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|226091|prf||1410284A abscisic acid inducible gene
Length = 157
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 55/83 (66%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T++E+L + F+++GE++ +K++ RE+G S+GFGFV +++ +
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIE M+GK LDG I V A+
Sbjct: 64 DAIENMNGKELDGRNITVNQAQS 86
>gi|413933457|gb|AFW68008.1| responsive to abscisic acid15 [Zea mays]
Length = 159
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 55/83 (66%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T++E+L + F+++GE++ +K++ RE+G S+GFGFV +++ +
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIE M+GK LDG I V A+
Sbjct: 64 DAIENMNGKELDGRNITVNQAQS 86
>gi|226491203|ref|NP_001151562.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195647746|gb|ACG43341.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 55/83 (66%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T++E+L + F+++GE++ +K++ RE+G S+GFGFV +++ +
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIE M+GK LDG I V A+
Sbjct: 64 DAIENMNGKELDGRNITVNQAQS 86
>gi|195645042|gb|ACG41989.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 142
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 55/83 (66%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T++E+L + F+++GE++ +K++ RE+G S+GFGFV +++ +
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIE M+GK LDG I V A+
Sbjct: 64 DAIENMNGKELDGRNITVNQAQS 86
>gi|194700358|gb|ACF84263.1| unknown [Zea mays]
gi|413933458|gb|AFW68009.1| responsive to abscisic acid15 [Zea mays]
Length = 140
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 55/83 (66%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T++E+L + F+++GE++ +K++ RE+G S+GFGFV +++ +
Sbjct: 4 ADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSML 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AIE M+GK LDG I V A+
Sbjct: 64 DAIENMNGKELDGRNITVNQAQS 86
>gi|340719924|ref|XP_003398394.1| PREDICTED: polyadenylate-binding protein 1-like isoform 4 [Bombus
terrestris]
Length = 612
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + ESG SKG+GFV + T EAA K+I+
Sbjct: 100 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQD-ESGVSKGYGFVHFETEEAANKSIDR 158
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 159 VNGMLLNGKKVYVGKFIPRK 178
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV ++ E A KA+
Sbjct: 296 VNLYVKNLDDSIDDERLRKEFAPFGTITSAKVM--MEEGRSKGFGFVCFSAPEEATKAVT 353
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 354 EMNGRIIVTKPLYVALAQRKE 374
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + TD+ L++ F +G + K++ ++ G S+GFGFV + +AA +A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVM-IKDDGKSRGFGFVAFEDPDAAEQAVL 250
Query: 98 GMDGKFL-DGWVIFVEYAKPR 117
++GK + +G ++V A+ +
Sbjct: 251 ELNGKEVAEGKCMYVGRAQKK 271
>gi|395853072|ref|XP_003799044.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Otolemur
garnettii]
Length = 633
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|388521423|gb|AFK48773.1| unknown [Lotus japonicus]
Length = 146
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 18 STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
S +P +S LN + S+ LF+ GLS D++L D FS+FG V A+++ R++G
Sbjct: 19 SQAPVASMLNYIR---CMSSSKLFIGGLSYGVDDKSLEDAFSSFGTVAEARVIVDRDTGR 75
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
S+GFGFV + + E+A A+ MDG+ L+G I V YA R
Sbjct: 76 SRGFGFVSFDSEESASSALSSMDGQDLNGRNIRVSYANDR 115
>gi|344287655|ref|XP_003415568.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Loxodonta
africana]
Length = 631
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|338721952|ref|XP_003364452.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Equus
caballus]
Length = 631
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|226502290|ref|NP_001150604.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640520|gb|ACG39728.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|414591943|tpg|DAA42514.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 316
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
+FV GLS +TT+ TL TF +G V+ A++V RE+G S+GFGFV ++ A AI GM
Sbjct: 9 IFVGGLSWKTTERTLERTFGQYGNVIEAQVVVKRETGRSRGFGFVTFSEPRAVDAAIRGM 68
Query: 100 DGKFLDGWVIFVEYAKPR 117
LDG I V A PR
Sbjct: 69 HNAELDGRNISVNKAHPR 86
>gi|340719922|ref|XP_003398393.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3 [Bombus
terrestris]
Length = 621
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + ESG SKG+GFV + T EAA K+I+
Sbjct: 100 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQD-ESGVSKGYGFVHFETEEAANKSIDR 158
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 159 VNGMLLNGKKVYVGKFIPRK 178
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV ++ E A KA+
Sbjct: 296 VNLYVKNLDDSIDDERLRKEFAPFGTITSAKVM--MEEGRSKGFGFVCFSAPEEATKAVT 353
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 354 EMNGRIIVTKPLYVALAQRKE 374
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + TD+ L++ F +G + K++ ++ G S+GFGFV + +AA +A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVM-IKDDGKSRGFGFVAFEDPDAAEQAVL 250
Query: 98 GMDGKFL-DGWVIFVEYAKPR 117
++GK + +G ++V A+ +
Sbjct: 251 ELNGKEVAEGKCMYVGRAQKK 271
>gi|307095208|gb|ADN29910.1| poly A binding protein cytoplasmic 1 isoform 1-like protein
[Triatoma matogrossensis]
Length = 341
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 10/118 (8%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQR---PQAEPST------NLFVSGLSKRTTDETLRDTFSA 60
P R T F + P R Q +PS N+F+ L K ++ + DTFSA
Sbjct: 64 PADAERALDTMNFDTLKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSA 123
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
FG ++ K+ + ESG SKG+GFV + T EAA K+I+ ++G L+G +FV PR+
Sbjct: 124 FGNILSCKVAQD-ESGSSKGYGFVHFETEEAATKSIDKVNGMLLNGKKVFVGKFIPRK 180
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN++V + TD+ L++ F +G + +V +++ S+GFGFV + EAA
Sbjct: 189 KAKLFTNVYVKNFGEDFTDDMLKEMFEKYGPITSHTVVVNKDQK-SRGFGFVAFEDPEAA 247
Query: 93 GKAIEGMDGK-FLDGWVIFVEYAKPR 117
+A+E ++GK ++G ++V A+ +
Sbjct: 248 ERAVEDLNGKEIIEGKQLYVGRAQKK 273
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGF 83
+R NL+V L DE LR FS FG + AK++ E SKGFGF
Sbjct: 290 ERMNRYQGVNLYVKNLDDTIDDERLRKEFSPFGTITSAKVM--LEERRSKGFGF 341
>gi|410966844|ref|XP_003989937.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Felis catus]
Length = 631
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK ++G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEINGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|346223551|ref|ZP_08844693.1| RNP-1 like RNA-binding protein [Anaerophaga thermohalophila DSM
12881]
Length = 159
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NLFV+ LS TT + L D F+ +GEVV AK++ R++G SK FGFV+ E+A KAI+
Sbjct: 58 NLFVAKLSAATTSDDLNDLFAEYGEVVSAKVIMDRDTGASKRFGFVEMKDEESAQKAIKD 117
Query: 99 MDGKFLDGWVIFVEYAKPR 117
++ D I V+ A+P+
Sbjct: 118 LNECLFDNSPIVVKQARPK 136
>gi|344287653|ref|XP_003415567.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Loxodonta
africana]
Length = 660
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|410966840|ref|XP_003989935.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Felis catus]
Length = 660
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|242043176|ref|XP_002459459.1| hypothetical protein SORBIDRAFT_02g004930 [Sorghum bicolor]
gi|241922836|gb|EER95980.1| hypothetical protein SORBIDRAFT_02g004930 [Sorghum bicolor]
Length = 301
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
+FV GLS TT+ TL TF +G+V+ A++V RE+G S+GFGFV ++ A AI GM
Sbjct: 9 IFVGGLSWDTTERTLERTFGQYGKVIEAQVVVERETGRSRGFGFVTFSEPRAVDAAIRGM 68
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
LDG I V A+PR
Sbjct: 69 HNGELDGRNISVNKAQPRN 87
>gi|431922543|gb|ELK19486.1| Polyadenylate-binding protein 4 [Pteropus alecto]
Length = 720
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK ++G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEINGKVIFVGRAQKK 269
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQR---PQAEPST------NLFVSGLSKRTTDETLRDTFSA 60
P R T F P R Q +PS N+F+ L K ++ L DTFSA
Sbjct: 62 PADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSA 121
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
FG ++ K+V E+G SKG+ FV + T EAA KAIE M+G L+ +FV K R+
Sbjct: 122 FGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRK 177
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|297814870|ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321156|gb|EFH51577.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
+P F+ GL+ T+D LRD F +G +V AK+V + SG S+GFGF+ + +A +
Sbjct: 4 DPEYRCFIGGLAWSTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQ 118
AI M+G LDG I V+ A+P Q
Sbjct: 64 AIAAMNGMDLDGRTITVDKAQPHQ 87
>gi|388518113|gb|AFK47118.1| unknown [Lotus japonicus]
Length = 146
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 18 STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
S +P +S LN + S+ LF+ GLS D++L D FS+FG V A+++ R++G
Sbjct: 19 SQAPVASMLNYIR---CMSSSKLFIGGLSYGVDDKSLEDAFSSFGTVAEARVIVDRDTGR 75
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
S+GFGFV + + E+A A+ MDG+ L+G I V YA R
Sbjct: 76 SRGFGFVSFDSEESASSALSSMDGQDLNGRNIRVSYANDR 115
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK ++G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEINGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|357460829|ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355489744|gb|AES70947.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 379
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVV-HAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLF+ L ++ L DTFSAFG +V + KI++ ++G S+GFGF+ Y + EA+ AIE
Sbjct: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIE 172
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G++L I V YA
Sbjct: 173 AMNGQYLCNRQITVSYA 189
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 41 FVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMD 100
+V L + ++E L + F G VV+ + K R + +G+GFV++ + E A AI+ ++
Sbjct: 28 YVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAIKVLN 87
Query: 101 GKFLDGWVIFVEYA 114
L G I V A
Sbjct: 88 MIKLYGKPIRVNKA 101
>gi|395853068|ref|XP_003799042.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Otolemur
garnettii]
Length = 662
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|348552998|ref|XP_003462314.1| PREDICTED: polyadenylate-binding protein 4-like isoform 3 [Cavia
porcellus]
Length = 615
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK ++G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEINGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|338721949|ref|XP_003364451.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Equus
caballus]
Length = 660
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|296121725|ref|YP_003629503.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM 3776]
gi|296014065|gb|ADG67304.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM 3776]
Length = 104
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
T L+V L+ + L FS+FGEV A++V RE+G SKGFGFV++ ++A AI
Sbjct: 3 TKLYVGNLTYDVNNSGLEQLFSSFGEVRSAQVVMDRETGRSKGFGFVEFGDSQSASDAIN 62
Query: 98 GMDGKFLDGWVIFVEYAKPRQP 119
M+GK ++G + V A+PR+
Sbjct: 63 AMNGKDVNGRALTVNEARPREE 84
>gi|351713677|gb|EHB16596.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 661
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST ++V LS TTD+TLR+ FS +G+VV + +++ RE+G S+GFGFV +++ + A AI
Sbjct: 2 STKVYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
+ + LDG I V A R
Sbjct: 62 NSLHEQDLDGRRIKVNLANAR 82
>gi|213623691|gb|AAI70089.1| LOC397919 protein [Xenopus laevis]
Length = 704
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S LFV GLS+ TT+ETL++ AF ++A+IV R++G SKGFGFV +++ E A A
Sbjct: 552 SKTLFVRGLSEDTTEETLKE---AFDGSINARIVTDRDTGASKGFGFVDFSSSEDAKAAR 608
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
E M+ +DG + +++AKP+
Sbjct: 609 EAMEDGEIDGNKVTLDFAKPK 629
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L V+ LS T+++LR+ F + +I +++ G +KGF FV+++++E A +A++
Sbjct: 467 LVVNNLSYSATEDSLREVFE---KATSIRIPQNQ--GRAKGFAFVEFSSMEDAKEAMDSC 521
Query: 100 DGKFLDGWVIFVEYA 114
+ ++G I +E++
Sbjct: 522 NNTEVEGRSIRLEFS 536
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 22 FSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVK--HRESGYSK 79
F + N + + + T LFV + T+ E L++ F +AK ++ G +K
Sbjct: 360 FDKNKNAENKKERDSRT-LFVKNIPYSTSAEELQEIFE------NAKDIRIPTGNDGSNK 412
Query: 80 GFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEY 113
G +V+++T A KA+E G ++G +FV++
Sbjct: 413 GIAYVEFSTEAEANKALEEKQGAEIEGRSLFVDF 446
>gi|2674201|gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 164
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ TTD++L++ FS +GE++ +KI+ RE+G S+GFGFV + ++
Sbjct: 3 ADIEYRCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKSMR 62
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AI+GM+ + LDG I V A+
Sbjct: 63 DAIQGMNSQELDGRNITVNEAQ 84
>gi|2331131|gb|AAB66884.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 162
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L FS +GE++ +KI+ RE+G S GFGF+ +++ ++ AIEGM
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSLGFGFITFSSEQSMRDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAK 115
+GK LDG I V A+
Sbjct: 70 NGKELDGRNITVNEAQ 85
>gi|402593376|gb|EJW87303.1| hypothetical protein WUBG_01785 [Wuchereria bancrofti]
Length = 375
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
N+FV L ++ L DTFSAFG ++ KI++ E+G SKGF FV +A+ EA+ AIE
Sbjct: 101 NVFVGNLDPEVDEKLLFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFEASDSAIE 160
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G+FL I V YA
Sbjct: 161 AMNGQFLCNRAITVSYA 177
Score = 41.6 bits (96), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
++V GL ++ TD L + F G VV + K R + +GFGF+++ E A AI+ M
Sbjct: 15 IYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKIM 74
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
+ L G I V A +
Sbjct: 75 NMIKLYGKPIKVNKASAHE 93
>gi|224117596|ref|XP_002317618.1| predicted protein [Populus trichocarpa]
gi|222860683|gb|EEE98230.1| predicted protein [Populus trichocarpa]
Length = 418
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 12 GLRRLFSTSPFSSSLNPPQRPQAEP---STNLFVSGLSKRTTDETLRDTFSAFGEVVHAK 68
G RR S P S ++PP R +A P S L V L++ + LR+ FS FGEVVH +
Sbjct: 78 GARRGRSPPPQSKKVSPPPR-KASPIRESLVLHVDSLTRNVNEGHLREIFSNFGEVVHVE 136
Query: 69 IVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA-KPRQ 118
+ R KGFG+V++ T A KA+ MDG +DG V+ ++ PRQ
Sbjct: 137 LAMDRTVNLPKGFGYVEFKTRADAEKALLYMDGAQIDGNVVRAKFTLPPRQ 187
>gi|371776952|ref|ZP_09483274.1| RNP-1 like RNA-binding protein [Anaerophaga sp. HS1]
Length = 100
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NLFV+ LS TT + L + F+ +GEVV AK++ RE+G SK FGFV+ AA KAI+
Sbjct: 2 NLFVAKLSAATTSDDLNELFAEYGEVVSAKVIMDRETGTSKRFGFVEMKDEAAAMKAIKD 61
Query: 99 MDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYG 133
++ D I V+ A+P+ +N N YG
Sbjct: 62 LNECLFDNSPIVVKKARPK------GENRNNHSYG 90
>gi|149693775|ref|XP_001503500.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Equus
caballus]
Length = 644
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|73976763|ref|XP_857000.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Canis lupus
familiaris]
Length = 644
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|366987527|ref|XP_003673530.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
gi|342299393|emb|CCC67147.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
Length = 415
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
+EPS LF+ LS + + + FS +GE++ +I H E+ KGFG+V+Y +E A
Sbjct: 258 SEPSETLFLGNLSFNADRDAISELFSKYGEIISVRIPTHPETEQPKGFGYVQYTNVEDAK 317
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPR 117
KA+EG+ G+++D + ++Y+ PR
Sbjct: 318 KALEGLQGEYIDNRPVRLDYSTPR 341
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q+ + EP+T +FV LS DE L+ F G VV A+++ R + S+G+G+V +
Sbjct: 155 QKTEGEPAT-IFVGRLSWSIDDEWLKKEFEHIGGVVSARVIMERGTDRSRGYGYVDFEDK 213
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
A KAI+ M GK +DG I V+ +
Sbjct: 214 SYAEKAIKEMQGKEIDGREINVDMS 238
>gi|212412|gb|AAA48983.1| nucleolin/C23, partial [Gallus gallus]
Length = 288
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
+ S LFV GLS+ TT+ETLR++F + A+IV R++G SKGFGFV +++ E A
Sbjct: 144 QQSKTLFVRGLSEDTTEETLRESFEG---SISARIVTDRDTGSSKGFGFVDFSSPEDAKA 200
Query: 95 AIEGMDGKFLDGWVIFVEYAKPR 117
A E M+ +DG + +++AKP+
Sbjct: 201 AKEAMEDGEIDGNKVTLDFAKPK 223
>gi|395853070|ref|XP_003799043.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Otolemur
garnettii]
Length = 646
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|410966842|ref|XP_003989936.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Felis catus]
Length = 644
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|403419677|emb|CCM06377.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
+EPS LFV LS T++ L +TFS +G+V ++ RE+G KGF +V+++ +E A
Sbjct: 410 SEPSAVLFVGNLSFSATEDLLWETFSEYGDVKSVRVPTDRETGSPKGFAYVEFSDVETAK 469
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPRQ 118
A EG+ GK + G + ++Y++PR
Sbjct: 470 SAYEGVSGKEIAGRAVRLDYSQPRD 494
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
++FV LS +E L F+ GEVV A++ R +G S+GF +V +AT EAA A++
Sbjct: 315 SIFVGRLSWNVDNEWLAQEFADCGEVVSARVQMDRNTGKSRGFAYVTFATAEAAQAALQL 374
Query: 99 MDGKFLDGWVIFVEYAKPRQP 119
GK +DG + ++ R P
Sbjct: 375 T-GKEIDGRPVNIDMTTERDP 394
>gi|344287651|ref|XP_003415566.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Loxodonta
africana]
Length = 644
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|115480705|ref|NP_001063946.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|52076131|dbj|BAD46644.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|52076138|dbj|BAD46651.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|113632179|dbj|BAF25860.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|215697272|dbj|BAG91266.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737486|dbj|BAG96616.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218202645|gb|EEC85072.1| hypothetical protein OsI_32419 [Oryza sativa Indica Group]
gi|222642113|gb|EEE70245.1| hypothetical protein OsJ_30367 [Oryza sativa Japonica Group]
Length = 322
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 58/112 (51%), Gaps = 12/112 (10%)
Query: 8 AAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHA 67
AAPRG R PP+ Q PS ++V L + D L FS G+VV A
Sbjct: 219 AAPRGAR----------VERPPR--QFGPSFRIYVGNLPWQVDDSRLVQLFSEHGKVVDA 266
Query: 68 KIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
++V RE+G S+GFGFV AT E AI +DG+ LDG + V A+ R P
Sbjct: 267 RVVYDRETGRSRGFGFVTMATQEELDDAIAALDGQSLDGRALRVNVAEERPP 318
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
++V L E L F G V ++++ +RE+ S+GFGFV +T+E A KA+E
Sbjct: 144 KVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 203
Query: 99 MDGKFLDGWVIFVEYAKPR 117
+DG ++ V A PR
Sbjct: 204 FHRYDVDGRLLTVNKAAPR 222
>gi|356538787|ref|XP_003537882.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 170
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 32 PQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEA 91
A+ FV GL+ T ++ L FS +G++V +K++ RE+G S+GFGFV +A+ ++
Sbjct: 2 ASADVEFRCFVGGLAWVTGNDALEKAFSIYGDIVESKVINDRETGRSRGFGFVTFASEQS 61
Query: 92 AGKAIEGMDGKFLDGWVIFVEYAKPR 117
AI GM+G+ LDG I V A+ R
Sbjct: 62 MKDAIAGMNGQDLDGRNITVNEAQTR 87
>gi|348552996|ref|XP_003462313.1| PREDICTED: polyadenylate-binding protein 4-like isoform 2 [Cavia
porcellus]
Length = 644
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK ++G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEINGKIIFVGRAQKK 269
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|326474784|gb|EGD98793.1| glycine-rich RNA-binding protein [Trichophyton tonsurans CBS
112818]
Length = 149
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GL+ TTD+TLR+ FS FG + A +VK R++ S+GFGFV++++ A A+ M
Sbjct: 6 LFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNAM 65
Query: 100 DGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYGR 134
+ + DG VI V+ A R S YGR
Sbjct: 66 NNQEFDGRVIRVDKATERSSGGGGSYGQRQGGYGR 100
>gi|119177425|ref|XP_001240490.1| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
gi|320032129|gb|EFW14085.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|392867546|gb|EAS29215.2| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
Length = 147
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GL+ TTDETLR FS FG + A +VK R++ S+GFGFV++A+ A A+ M
Sbjct: 4 LFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMNEM 63
Query: 100 DGKFLDGWVIFVEYAKPRQPPTLPSQNNTN 129
+ + DG I V+ A R P+ P + N
Sbjct: 64 NNQEFDGRTIRVDKAADR--PSGPRNDGFN 91
>gi|20257707|gb|AAM16019.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++ +A AIEGM
Sbjct: 19 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXEDAMRSAIEGM 78
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 79 NGKELDGRNITVNEAQS 95
>gi|406983427|gb|EKE04629.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 96
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ L+ +T++E L + +GEV +I+K R++G SKGFGFV+ AT E A +E +
Sbjct: 3 LFIGNLNFKTSEEDLMELLKEYGEVKSLQIIKDRDTGRSKGFGFVEMATKEQAESVMENL 62
Query: 100 DGKFLDGWVIFVEYAKPRQPP 120
+G DG V+ V+YAK ++
Sbjct: 63 NGAEFDGKVLKVDYAKEKEES 83
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
+EPS LF+ LS + + + FS FGE+V +I H E+ KGFG+V+Y +E A
Sbjct: 261 SEPSETLFLGNLSFNADRDNISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVEDAK 320
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQNNT 128
KA++ + G+++D + ++++ PR P QNN+
Sbjct: 321 KALDALQGEYIDNRPVRLDFSTPR-----PPQNNS 350
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
EP+T +FV LS DE L++ F G V+ A+++ R + S+G+G+V + E A
Sbjct: 162 GEPAT-IFVGRLSWSIDDEWLKNEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKEYAE 220
Query: 94 KAIEGMDGKFLDGWVIFVEYA 114
KA++ M GK +DG I + +
Sbjct: 221 KAVKEMHGKEIDGREINCDMS 241
>gi|303315989|ref|XP_003067999.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240107675|gb|EER25854.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
Length = 117
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ LF+ GL+ TTDETLR FS FG + A +VK R++ S+GFGFV++A+ A A+
Sbjct: 2 SKLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMN 61
Query: 98 GMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTN 129
M+ + DG I V+ A R P+ P + N
Sbjct: 62 EMNNQEFDGRTIRVDKAADR--PSGPRNDGFN 91
>gi|351725105|ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
gi|255625591|gb|ACU13140.1| unknown [Glycine max]
Length = 156
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T + L FS +G+VV +KI+ RE+G S+GFGFV +A+ ++
Sbjct: 4 ADVEYRCFVGGLAWATDNYDLEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASEDSMR 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AIEGM+G+ LDG I V A+
Sbjct: 64 DAIEGMNGQNLDGRNITVNEAQ 85
>gi|118486874|gb|ABK95271.1| unknown [Populus trichocarpa]
Length = 418
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 12 GLRRLFSTSPFSSSLNPPQRPQAEP---STNLFVSGLSKRTTDETLRDTFSAFGEVVHAK 68
G RR S P S ++PP R +A P S L V L++ + LR+ FS FGEVVH +
Sbjct: 78 GARRGRSPPPQSKKVSPPPR-KASPIRESLVLHVDSLTRNVNEGHLREIFSNFGEVVHVE 136
Query: 69 IVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA-KPRQ 118
+ R KGFG+V++ T A KA+ MDG +DG V+ ++ PRQ
Sbjct: 137 LAMDRTVNLPKGFGYVEFKTRADAEKALLYMDGAQIDGNVVRAKFTLPPRQ 187
>gi|281344898|gb|EFB20482.1| hypothetical protein PANDA_020836 [Ailuropoda melanoleuca]
Length = 674
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 199 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 257
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 258 NKAVEEMNGKEISGKVIFVGRAQKK 282
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 113 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 170
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 171 MNGMLLNDRKVFVGRFKSRK 190
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 307 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 364
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 365 EMNGRIVGSKPLYVALAQRKE 385
>gi|6273331|gb|AAF06329.1|AF191305_1 glycine-rich RNA binding protein, partial [Medicago sativa]
Length = 105
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T ++ L FS +GE+V +KI+ RE+G S+GFGFV +A ++
Sbjct: 2 ADVEDRCFVGGLAWATDNDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMN 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
IE M+G+ LDG I V A+
Sbjct: 62 DVIEAMNGQDLDGRNITVNQAQ 83
>gi|301790633|ref|XP_002930398.1| PREDICTED: polyadenylate-binding protein 4-like [Ailuropoda
melanoleuca]
Length = 644
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|348502707|ref|XP_003438909.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Oreochromis niloticus]
Length = 623
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + TDE L++ FSAFG + +++K E G S+GFGFV YA E A KA+
Sbjct: 191 TNVYIKNFGEDFTDEKLKEVFSAFGRTLSVRVMKD-EKGRSRGFGFVNYAHHEDAQKAVN 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK ++G +++V A+ R
Sbjct: 250 EMNGKEINGKILYVGRAQKR 269
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ + + ++ L DTFSAFG ++ K+V E G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNMDESIDNKALYDTFSAFGNILSCKVVCD-EKG-SKGYGFVHFETQEAANRAIET 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV + K R+
Sbjct: 158 MNGMLLNDRKVFVGHFKSRK 177
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R Q NL+V L DE LR F+ +G + AK++ + SKGFGFV +++ E
Sbjct: 287 RIQRYQGVNLYVKNLDDSIDDERLRKEFAPYGTITSAKVMT--DGSQSKGFGFVCFSSPE 344
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
A KA+ M+G+ + ++V A+ R+
Sbjct: 345 EATKAVTEMNGRIVATKPLYVALAQRRE 372
>gi|374373120|ref|ZP_09630780.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373234093|gb|EHP53886.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 88
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 54/83 (65%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++VS L +D+ LR+ FS+FG+V AK++ R +G S+GFGFV+ ++ A A++
Sbjct: 2 NMYVSNLGFHASDDDLRELFSSFGQVSSAKVIMDRTTGKSRGFGFVEMGSVSDATLAMKE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQPPT 121
+DGK +DG I V AK R+ +
Sbjct: 62 LDGKDVDGRRIAVSAAKEREERS 84
>gi|331228813|ref|XP_003327073.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306063|gb|EFP82654.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 637
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V GLS E L+ F + G +V A+++ R++ SKGFG++ + T E A KAIE
Sbjct: 359 NVYVGGLSWNVDSEWLKSEFESCGPIVDARVITDRDTQKSKGFGYIDFETCEGAQKAIET 418
Query: 99 MDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNF 130
+G LDG + V+ + PR P++N +F
Sbjct: 419 KNGTELDGRTLKVDLSAPRA-ERAPAENKRDF 449
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 19/123 (15%)
Query: 3 LRAAVAAPRGLR------RLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRD 56
L+ ++APR R R FS S+ ST LFV L T +++ +
Sbjct: 429 LKVDLSAPRAERAPAENKRDFSKEELSAE-----------STTLFVGNLPFSATQDSVWE 477
Query: 57 TFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG--MDGKFLDGWVIFVEYA 114
F+ +G+V ++ E+ KGFG+V++ATLE+A A+E +G ++D ++++
Sbjct: 478 IFAEYGDVNSVRLPTDPETQRVKGFGYVEFATLESARAAVEKGRGEGVYIDNRQARLDFS 537
Query: 115 KPR 117
+PR
Sbjct: 538 QPR 540
>gi|312067511|ref|XP_003136777.1| spliceosomal protein on the X [Loa loa]
gi|307768054|gb|EFO27288.1| spliceosomal protein on the X [Loa loa]
Length = 375
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
N+FV L ++ L DTFSAFG ++ KI++ E+G SKGF FV +A+ EA+ AIE
Sbjct: 101 NVFVGNLDPEVDEKLLFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFEASDSAIE 160
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G+FL I V YA
Sbjct: 161 AMNGQFLCNRAITVSYA 177
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
++V GL ++ TD L + F G VV + K R + +GFGF+++ E A AI+ M
Sbjct: 15 IYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKIM 74
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
+ L G I V A +
Sbjct: 75 NMIKLYGKPIKVNKASAHE 93
>gi|410921712|ref|XP_003974327.1| PREDICTED: nucleolin-like isoform 1 [Takifugu rubripes]
Length = 680
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R A P+ LFV GLS+ TTD +L++ AF V A+IV +++G SKGFGFV +
Sbjct: 518 RGNAGPTKTLFVKGLSEDTTDHSLKE---AFDGAVAARIVTDKDTGSSKGFGFVDFDNEA 574
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
A E MD +DG + ++YAKP+
Sbjct: 575 DCKAAKEAMDDGEIDGSKVTLDYAKPK 601
Score = 35.0 bits (79), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S L V+ L+ T++ L+ TF E + + R+ G KGF FV++ T+ A A+
Sbjct: 436 SKTLIVNNLAFSATEDVLQSTF----EKATSIRIPQRD-GRPKGFAFVEFETVNDATDAL 490
Query: 97 EGMDGKFLDGWVIFVEYAK 115
E + ++G I +EY++
Sbjct: 491 ENFNNTDIEGRSIRLEYSQ 509
>gi|409046552|gb|EKM56032.1| hypothetical protein PHACADRAFT_145047 [Phanerochaete carnosa
HHB-10118-sp]
Length = 322
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEV-VHAKIVKHRESGYSKGFGFVKYATL 89
+ Q + NLF+ L + + L DTFSAFG + AKI + +SG SKG+GFV Y
Sbjct: 92 KKQLDVGANLFIGNLDENVDERLLYDTFSAFGVMATTAKIARDPQSGQSKGYGFVSYTDF 151
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
E++ AIE M+G+FL I V+YA
Sbjct: 152 ESSDAAIESMNGQFLMNKPITVQYA 176
>gi|392567732|gb|EIW60907.1| hypothetical protein TRAVEDRAFT_146596 [Trametes versicolor
FP-101664 SS1]
Length = 337
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEV-VHAKIVKHRESGYSKGFGFVKYATL 89
+ Q + NLF+ L + + L DTFSAFG + AKI + SG SKG+GFV Y
Sbjct: 92 KKQLDVGANLFIGNLDENVDERLLYDTFSAFGMMATTAKIARDPTSGKSKGYGFVSYTDF 151
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
E++ AIE M+G+FL I V+YA
Sbjct: 152 ESSDAAIESMNGQFLMNKAITVQYA 176
>gi|355745175|gb|EHH49800.1| hypothetical protein EGM_00521 [Macaca fascicularis]
Length = 635
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 161 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 219
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 220 NKAVEEMNGKEISGKIIFVGRAQKK 244
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 75 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 132
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 133 MNGMLLNDRKVFVGRFKSRK 152
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 269 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 326
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 327 EMNGRIVGSKPLYVALAQRKE 347
>gi|350585908|ref|XP_003482078.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Sus scrofa]
Length = 660
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|395330318|gb|EJF62702.1| hypothetical protein DICSQDRAFT_104224 [Dichomitus squalens
LYAD-421 SS1]
Length = 344
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEV-VHAKIVKHRESGYSKGFGFVKYATL 89
+ Q + NLF+ L + + L DTFSAFG + AKI + ++G SKG+GFV Y
Sbjct: 92 KKQLDVGANLFIGNLDENVDERLLYDTFSAFGMMATTAKIARDPQTGKSKGYGFVSYTDF 151
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
E++ AIE M+G+FL I V+YA
Sbjct: 152 ESSDAAIESMNGQFLMNKAITVQYA 176
>gi|344231201|gb|EGV63083.1| hypothetical protein CANTEDRAFT_106956 [Candida tenuis ATCC 10573]
Length = 231
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
PS LF+ LS T + L + F +GEV+ +I H ++ KGFG+V+Y ++E A A
Sbjct: 102 PSDTLFIGNLSFNATRDKLFEAFGQYGEVISCRIPTHPDTQQPKGFGYVQYGSIEEAKAA 161
Query: 96 IEGMDGKFLDGWVIFVEYAKPRQP 119
+E ++G++++G ++Y+ PR P
Sbjct: 162 LEALNGEYIEGRPCRLDYSTPRDP 185
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
EP+T LFV LS D+ L+ F G V+ A+++ R +G S+G+G+V + + A K
Sbjct: 1 EPAT-LFVGRLSWNIDDDWLKREFEPSGGVISARVIMERATGKSRGYGYVDFESKADAEK 59
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYG 133
A++ GK +DG I ++ + + P P++N+ ++G
Sbjct: 60 ALQDFQGKEIDGRPINLDLSTSK--PQTPAKNDRAKKFG 96
>gi|332248417|ref|XP_003273360.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|383411099|gb|AFH28763.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
gi|384941234|gb|AFI34222.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
Length = 631
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|402854031|ref|XP_003891684.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Papio anubis]
Length = 631
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|402854027|ref|XP_003891682.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Papio anubis]
Length = 660
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVV-HAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLFV L ++ L DTFSAFG +V + KI++ ++G S+GFGFV Y + EA+ AIE
Sbjct: 113 NLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIE 172
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G++L I V YA
Sbjct: 173 AMNGQYLCNRQITVSYA 189
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 41 FVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMD 100
+V L + T+E L + F G VV+ + K R + +G+GFV++ + E A AI+ ++
Sbjct: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Query: 101 GKFLDGWVIFVEYA 114
L G I V A
Sbjct: 88 MIKLYGKPIRVNKA 101
>gi|15231557|ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|15983477|gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|9294301|dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana]
gi|15451066|gb|AAK96804.1| Unknown protein [Arabidopsis thaliana]
gi|18377412|gb|AAL66872.1| unknown protein [Arabidopsis thaliana]
gi|62320797|dbj|BAD93728.1| RNA-binding protein [Arabidopsis thaliana]
gi|110742443|dbj|BAE99140.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332643635|gb|AEE77156.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 245
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
+P F+ GL+ T+D LRD F +G +V AK+V + SG S+GFGF+ + +A +
Sbjct: 4 DPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQ 118
AI M+G LDG I V+ A+P Q
Sbjct: 64 AIAAMNGMDLDGRTITVDKAQPHQ 87
>gi|389610655|dbj|BAM18939.1| polyA-binding protein [Papilio polytes]
Length = 611
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + E+G SKG+GFV + T EAA K+IE
Sbjct: 100 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSIEK 158
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 159 VNGMLLNGKKVYVGRFIPRK 178
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 296 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 353
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 354 EMNGRIVGTKPLYVALAQRKE 374
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + +DE LR+ F +G + K++ ++E G S+GFGFV + +AA +A
Sbjct: 192 TNVYVKNFGEDFSDEMLREMFEKYGRITSHKVM-YKEDGSSRGFGFVAFEDPDAAERACM 250
Query: 98 GMDGK-FLDGWVIFVEYAKPR 117
++GK ++G ++V A+ +
Sbjct: 251 ELNGKELVEGKPLYVGRAQKK 271
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 28 PPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYA 87
PP P A +L+V L T+ L + FS G V+ ++ + + S G+ +V +
Sbjct: 5 PPNYPMA----SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQ 60
Query: 88 TLEAAGKAIEGMDGKFLDGWVIFVEYAK 115
A +A+EGM+ + G I + +++
Sbjct: 61 QPADAERALEGMNFDIIKGRPIRIMWSQ 88
>gi|332248413|ref|XP_003273358.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|355557859|gb|EHH14639.1| hypothetical protein EGK_00600 [Macaca mulatta]
gi|383411103|gb|AFH28765.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
gi|384941238|gb|AFI34224.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
Length = 660
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|168033888|ref|XP_001769446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679366|gb|EDQ65815.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 108
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%)
Query: 19 TSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYS 78
+SP S R Q + LFV LS R +E L FS +G V+ A+I R+SG S
Sbjct: 5 SSPRSDRSGSRDRRQRDGPNKLFVGNLSWRCDEEALETLFSDYGRVLEARIATERDSGRS 64
Query: 79 KGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPP 120
+GFGFV ++ AIE +DG DG + V A + PP
Sbjct: 65 RGFGFVTLSSETEVNAAIESLDGADYDGRELRVNLAGDKPPP 106
>gi|403169799|ref|XP_003329214.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168425|gb|EFP84795.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 804
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L + ++ L DTF+AFG+++ K+ E G SKG+GFV Y T E+A AI+G
Sbjct: 262 NIFIKNLDETIDNKALHDTFAAFGDILSCKVATD-EHGASKGYGFVHYVTGESAEAAIKG 320
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+ V+FV PR+
Sbjct: 321 VNGMQLNDKVVFVGIHVPRR 340
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE L++ F+ FG + K++K E G SKGFGFV +++ + A KA+
Sbjct: 457 VNLYVKNLDDEYDDEKLQNEFTPFGTITSCKVMKD-EKGTSKGFGFVCFSSPDEATKAVA 515
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L ++V A+
Sbjct: 516 EMNGKMLGSKPLYVSLAQ 533
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L TT E L + F FG + A V+ E G +GFGFV Y E+A KA++
Sbjct: 354 TNLYIKNLPTETTTEELNEVFGKFGPITSAA-VQSDEHGKHRGFGFVNYENHESASKAVD 412
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
+ K G V++V A+ R
Sbjct: 413 ALHDKDYKGNVLYVARAQKR 432
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%)
Query: 24 SSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGF 83
++ P P ++P+T+L+V L T+ L + FS G V ++ + + S G+ +
Sbjct: 159 ATTTPNASPASQPNTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAY 218
Query: 84 VKYATLEAAGKAIEGMDGKFLDGWVIFVEYAK 115
V Y A +A+E ++ + + +++
Sbjct: 219 VNYLNAADAERALEQLNYSLIKNKACRIMWSQ 250
>gi|312282683|dbj|BAJ34207.1| unnamed protein product [Thellungiella halophila]
Length = 166
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D L TFS FGEV+ +KI+ RE+G S+GFGFV + ++ AIE M
Sbjct: 9 CFVGGLAWATADADLERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEEM 68
Query: 100 DGKFLDGWVIFVEYAK 115
+GK LDG I V A+
Sbjct: 69 NGKELDGRSITVNEAQ 84
>gi|441500694|ref|ZP_20982848.1| RNA-binding protein [Fulvivirga imtechensis AK7]
gi|441435535|gb|ELR68925.1| RNA-binding protein [Fulvivirga imtechensis AK7]
Length = 84
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+FV+ L+ RTT E L+ F AFGEV AK++ RE+ SKGFGFV+ +AA +AI+
Sbjct: 2 NIFVAKLNYRTTSEELQRQFEAFGEVSSAKVIFDRETQRSKGFGFVEMPDDDAAREAIKA 61
Query: 99 MDGKFLDGWVIFVEYAKPR 117
++ DG I V+ A+P+
Sbjct: 62 LNETEFDGRTIVVKEARPK 80
>gi|335291035|ref|XP_003127861.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Sus scrofa]
Length = 644
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
E FV LS TTDE+L+D FS +G+V AK+V + SG S+GF FV + +A +
Sbjct: 40 EDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEE 99
Query: 95 AIEGMDGKFLDGWVIFVEYAKPR 117
AIE M+G L+G I V+ A+P+
Sbjct: 100 AIEDMNGLDLEGRAITVDKAQPQ 122
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GLS T +E+L F +G + +++ +E+G S+GFGFVKY + A A+EGM
Sbjct: 7 LFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDALEGM 66
Query: 100 DGKFLDGWVIFVEYA 114
+GK LDG I V+ A
Sbjct: 67 NGKTLDGRAIRVDEA 81
>gi|410921714|ref|XP_003974328.1| PREDICTED: nucleolin-like isoform 2 [Takifugu rubripes]
Length = 672
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R A P+ LFV GLS+ TTD +L++ AF V A+IV +++G SKGFGFV +
Sbjct: 504 RGNAGPTKTLFVKGLSEDTTDHSLKE---AFDGAVAARIVTDKDTGSSKGFGFVDFDNEA 560
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
A E MD +DG + ++YAKP+
Sbjct: 561 DCKAAKEAMDDGEIDGSKVTLDYAKPK 587
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S L V+ L+ T++ L+ TF E + + R+ G KGF FV++ T+ A A+
Sbjct: 422 SKTLIVNNLAFSATEDVLQSTF----EKATSIRIPQRD-GRPKGFAFVEFETVNDATDAL 476
Query: 97 EGMDGKFLDGWVIFVEYAK 115
E + ++G I +EY++
Sbjct: 477 ENFNNTDIEGRSIRLEYSQ 495
>gi|406831764|ref|ZP_11091358.1| RNP-1 like RNA-binding protein [Schlesneria paludicola DSM 18645]
Length = 122
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST L+V LS T++TL F+ GEV A+IV R++G SKGFGFV+ +A AI
Sbjct: 2 STKLYVGNLSYNATNQTLEQMFAQHGEVRSAQIVTDRDTGRSKGFGFVEMGDSRSAEAAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQP 119
++G+ +DG + V A+PR+
Sbjct: 62 SALNGQEVDGRALTVNEARPRED 84
>gi|402854029|ref|XP_003891683.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Papio anubis]
Length = 644
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|332248415|ref|XP_003273359.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|383411101|gb|AFH28764.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
gi|384941236|gb|AFI34223.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
Length = 644
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|225433489|ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
vinifera]
gi|147833478|emb|CAN75185.1| hypothetical protein VITISV_001912 [Vitis vinifera]
gi|298205231|emb|CBI17290.3| unnamed protein product [Vitis vinifera]
Length = 152
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 57/85 (67%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+ S LF+ GLS T D++L+D FS+FG+VV A+++ R++G S+GFGFV + + ++A
Sbjct: 35 RCMSSAKLFIGGLSYGTDDQSLKDAFSSFGDVVEARVITDRDTGRSRGFGFVNFTSDDSA 94
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
A+ MDG+ L+G I V YA R
Sbjct: 95 SSALSAMDGQELNGRNIRVSYANER 119
>gi|225435044|ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|297746123|emb|CBI16179.3| unnamed protein product [Vitis vinifera]
Length = 112
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ +FV+ LS TT+E L + FS FG V A+++K ++ KGFGFVK+ + A KA+
Sbjct: 24 SSEIFVTRLSGYTTNEELIEMFSPFGVVTQARLIKDPKTQRPKGFGFVKFESEVDAEKAL 83
Query: 97 EGMDGKFLDGWVIFVEYAKPRQP 119
+ M+G+ + G +IFVE AK +P
Sbjct: 84 KAMNGRIVRGRLIFVEIAKTTRP 106
>gi|357462205|ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 135
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV GLS +++L+D FS+FG+V +IV ++SG ++GFGFV ++ +AA A + M
Sbjct: 38 LFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKDAM 97
Query: 100 DGKFLDGWVIFVEYA--KPRQPPTLPSQNNTNFQYGRQ 135
DGK L G + + +A KPR P + + N + +
Sbjct: 98 DGKALLGRPLRINFALEKPRGIPVVVPRFTDNGHFNKH 135
>gi|20257699|gb|AAM16015.1| glycine-rich RNA binding protein [Zea mays]
gi|20257705|gb|AAM16018.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++ A AIEGM
Sbjct: 19 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEGM 78
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 79 NGKELDGRNITVNEAQS 95
>gi|20257679|gb|AAM16005.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++ A AIEGM
Sbjct: 19 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEGM 78
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 79 NGKELDGRNITVNEAQS 95
>gi|388583201|gb|EIM23503.1| hypothetical protein WALSEDRAFT_67167 [Wallemia sebi CBS 633.66]
Length = 89
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
++ +++S LS T DE L FS FG++ ++K R++G S+GFGFV YA A A
Sbjct: 3 DNSKIYISNLSWSTNDEDLARAFSPFGQISDYIVMKDRQTGRSRGFGFVTYANDREASSA 62
Query: 96 IEGMDGKFLDGWVIFVEYAKPRQPP 120
+E M+ LDG I V YA R P
Sbjct: 63 LESMNEVELDGRRIRVNYAHARSSP 87
>gi|383118922|ref|ZP_09939662.1| hypothetical protein BSHG_3968 [Bacteroides sp. 3_2_5]
gi|251944121|gb|EES84630.1| hypothetical protein BSHG_3968 [Bacteroides sp. 3_2_5]
Length = 122
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F++G+S ++ L + F FGEV+ AKIV RE+G SKGFGFV+ E AI
Sbjct: 2 NIFIAGISYNLSNADLGELFEEFGEVISAKIVMDRETGRSKGFGFVEMPNDEEGNAAIAA 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
+ K +DG + V A+PR+
Sbjct: 62 LHEKEIDGKTLAVSVARPRE 81
>gi|326524682|dbj|BAK04277.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 657
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L D L + FS FGE+V AK++K R +G SKG+GFVKY+ + A AI
Sbjct: 336 TNLYIGYLPPMFDDSGLINLFSQFGEIVMAKVIKDRNTGQSKGYGFVKYSDVSQANAAIA 395
Query: 98 GMDGKFLDGWVIFV 111
M G L+G I V
Sbjct: 396 AMSGYHLEGRTIAV 409
>gi|126342190|ref|XP_001379497.1| PREDICTED: polyadenylate-binding protein 1 [Monodelphis domestica]
Length = 669
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+FV L K ++ L DTFS FG ++ K++ E+G SKG+GFV + T E+AGKAIE
Sbjct: 134 NVFVKNLEKSIDNKALYDTFSTFGRILSCKVISD-ENG-SKGYGFVHFETQESAGKAIEK 191
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 192 MNGMLLNNLKVFVGRFKSRR 211
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E+G SKGFGFV +++ + A KA
Sbjct: 328 VNLYIKNLDDTINDEHLRKEFSPFGTITSAKVM--MENGRSKGFGFVCFSSSKDAAKASR 385
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+GK + ++V A+ ++
Sbjct: 386 EMNGKLVASKPLYVSLAQRKE 406
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + D+ L + F+ +G + K++ + G SKGFGFV + + E A
Sbjct: 220 KAKDYTNIYIKNFGENMDDQRLTEIFAKYGPTLSVKVMTD-DCGRSKGFGFVSFQSHEDA 278
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPRQ 118
A++ M+GK L+G I+V A+ ++
Sbjct: 279 QAAVDDMNGKQLNGKQIYVGRAQKKR 304
>gi|409080475|gb|EKM80835.1| hypothetical protein AGABI1DRAFT_112564 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197375|gb|EKV47302.1| hypothetical protein AGABI2DRAFT_192533 [Agaricus bisporus var.
bisporus H97]
Length = 168
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 28 PPQRPQAEPST-NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKY 86
PP+R S N LS TTDETLR FS FG+V+ + +++ R++G S+GFGFV +
Sbjct: 16 PPEREAKLMSVKNTVYRNLSWNTTDETLRQAFSDFGQVLDSIVMRDRDTGRSRGFGFVTF 75
Query: 87 ATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
+ A AI G++ + LDG I V A R
Sbjct: 76 SNSGEADAAINGLNEQELDGRRIKVNMANAR 106
>gi|380793569|gb|AFE68660.1| polyadenylate-binding protein 4 isoform 3, partial [Macaca mulatta]
Length = 485
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|376316225|emb|CCF99622.1| RNA recognition motif-containing protein [uncultured Flavobacteriia
bacterium]
Length = 83
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+FV L+ D LR+ F AFG V A+++ RE+G S+GFGFV+ E A A++G
Sbjct: 2 NIFVGNLAWGVDDVVLREAFEAFGAVDSARVITDRETGRSRGFGFVEMPNQEEAQAALDG 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+GK L+G I ++PR+
Sbjct: 62 MEGKDLEGRPIRCNESQPRE 81
>gi|383760540|ref|YP_005439526.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
gi|381381210|dbj|BAL98027.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
Length = 161
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L+V L+ D++L+ F+ FG V AK++ RE+G SKGFGFV+ + A AI GM
Sbjct: 5 LYVGNLAYSVRDDSLQQAFAQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAAINGM 64
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
+G+ L+G I V A+PR+
Sbjct: 65 NGQPLEGRAIVVNEARPRE 83
>gi|426215226|ref|XP_004001875.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Ovis aries]
Length = 660
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEITGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|299754121|ref|XP_001833772.2| splicing factor 3b subunit 4 [Coprinopsis cinerea okayama7#130]
gi|298410613|gb|EAU88064.2| splicing factor 3b subunit 4 [Coprinopsis cinerea okayama7#130]
Length = 332
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEV-VHAKIVKHRESGYSKGFGFVKYATL 89
+ Q + NLFV L + + L DTFSAFG + AKI + +G SKG+GFV Y
Sbjct: 92 KKQLDVGANLFVGNLDENVDERLLYDTFSAFGMMATTAKIARDPSTGVSKGYGFVSYTDF 151
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
E++ AIE M+G+FL I V+YA
Sbjct: 152 ESSDAAIESMNGQFLMNKAITVQYA 176
>gi|392577429|gb|EIW70558.1| hypothetical protein TREMEDRAFT_71330 [Tremella mesenterica DSM
1558]
Length = 331
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVV-HAKIVKHRESGYSKGFGFVKYATL 89
+ Q + NLF+ L + L DTF+ FG + H KI + +G SKG+GFV Y
Sbjct: 91 KKQLDIGANLFIGNLDLNVDENALYDTFATFGSIAEHPKISRDPTTGQSKGYGFVSYHDF 150
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
+AA AIE M+G+F G I V+YA
Sbjct: 151 DAADMAIENMNGQFFGGQQITVQYA 175
>gi|317479260|ref|ZP_07938395.1| RNA recognition domain-containing protein [Bacteroides sp. 4_1_36]
gi|316904548|gb|EFV26367.1| RNA recognition domain-containing protein [Bacteroides sp. 4_1_36]
Length = 101
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+++SGL+ TTD L D FS +GEV A+I+ RE+ S+GFGFV+ A KAI+
Sbjct: 2 NIYISGLNFSTTDADLNDLFSEYGEVSSARIITDRETRRSRGFGFVEMPDDAAGQKAIDE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G D I V A+PR+
Sbjct: 62 LNGAEFDHKQISVNVARPRE 81
>gi|426215230|ref|XP_004001877.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Ovis aries]
Length = 631
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEITGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|374584597|ref|ZP_09657689.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
gi|373873458|gb|EHQ05452.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
Length = 109
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 49/81 (60%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST L+V GLS TTD TLR +F A G V A +V R +G S+GFGFV +A +A AI
Sbjct: 2 STKLYVGGLSWDTTDTTLRHSFEAHGSVHEAIVVMDRYTGKSRGFGFVTFADENSARTAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
M+G LDG I V A+ R
Sbjct: 62 SAMNGTDLDGRSITVSEAQER 82
>gi|209735756|gb|ACI68747.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 81
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV GLS TT+E+L + F+ +G + +++ +E+G S+GFGFVKY E A A+EGM
Sbjct: 7 LFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEGM 66
Query: 100 DGKFLDGWVIFV 111
+GK +D +IFV
Sbjct: 67 NGKSVD--LIFV 76
>gi|139948570|ref|NP_001077193.1| polyadenylate-binding protein 4 [Bos taurus]
gi|134024563|gb|AAI34510.1| PABPC4 protein [Bos taurus]
gi|296488909|tpg|DAA31022.1| TPA: poly A binding protein, cytoplasmic 4 [Bos taurus]
Length = 645
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEITGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|426215228|ref|XP_004001876.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Ovis aries]
Length = 644
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE L++ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEITGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|393245425|gb|EJD52935.1| polyadenylate binding protein [Auricularia delicata TFB-10046 SS5]
Length = 665
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L ++ ++ L DTF+AFG V+ K+ E G SKG+GFV Y T EAA AI+
Sbjct: 136 NIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATD-EHGNSKGYGFVHYETAEAAENAIKS 194
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+ +FV + PR+
Sbjct: 195 VNGMLLNDKKVFVGHHIPRK 214
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR F FG + K+++ E SKGFGFV +++ + A KA+
Sbjct: 331 VNLYIKNLEDDIDDEKLRAEFEPFGTITSCKVMRD-EKNTSKGFGFVCFSSPDEATKAVS 389
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+ K + ++V A+ R+
Sbjct: 390 EMNNKMIGSKPLYVSLAQRRE 410
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V L E + F FG + A + K E G S+GFGFV + + E A A+E
Sbjct: 228 TNIYVKNLDPELGQEGFEELFGKFGNITSAALSKDEE-GKSRGFGFVNFESHEQAAAAVE 286
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
+ ++G ++V A+ +
Sbjct: 287 TLHDTEINGRKLYVARAQKK 306
>gi|403169797|ref|XP_003889581.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168424|gb|EHS63645.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 715
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L + ++ L DTF+AFG+++ K+ E G SKG+GFV Y T E+A AI+G
Sbjct: 173 NIFIKNLDETIDNKALHDTFAAFGDILSCKVATD-EHGASKGYGFVHYVTGESAEAAIKG 231
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+ V+FV PR+
Sbjct: 232 VNGMQLNDKVVFVGIHVPRR 251
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE L++ F+ FG + K++K E G SKGFGFV +++ + A KA+
Sbjct: 368 VNLYVKNLDDEYDDEKLQNEFTPFGTITSCKVMKD-EKGTSKGFGFVCFSSPDEATKAVA 426
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+GK L ++V A+ ++
Sbjct: 427 EMNGKMLGSKPLYVSLAQRKE 447
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L TT E L + F FG + A V+ E G +GFGFV Y E+A KA++
Sbjct: 265 TNLYIKNLPTETTTEELNEVFGKFGPITSAA-VQSDEHGKHRGFGFVNYENHESASKAVD 323
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
+ K G V++V A+ R
Sbjct: 324 ALHDKDYKGNVLYVARAQKR 343
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 24 SSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGF 83
++ P P ++P+T+L+V L T+ L + FS G V ++ + + S G+ +
Sbjct: 70 ATTTPNASPASQPNTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAY 129
Query: 84 VKYATLEAAGKAIEGMD 100
V Y A +A+E ++
Sbjct: 130 VNYLNAADAERALEQLN 146
>gi|242048440|ref|XP_002461966.1| hypothetical protein SORBIDRAFT_02g011330 [Sorghum bicolor]
gi|241925343|gb|EER98487.1| hypothetical protein SORBIDRAFT_02g011330 [Sorghum bicolor]
Length = 294
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 20 SPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSK 79
+P S ++ P R Q+ PS ++V L + D L FS G+VV A++V RE+G S+
Sbjct: 193 APRGSRVDRPPR-QSGPSLRIYVGNLPWQVDDSKLVQMFSEHGKVVDARVVYDRETGRSR 251
Query: 80 GFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
GFGFV AT + AI +DG+ LDG + V A+ R
Sbjct: 252 GFGFVTMATQDELDDAIAALDGQSLDGRALRVNVAEER 289
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 26 LNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVK 85
+ PP+ + ++V L E L F G V A+++ +RE+ S+GFGFV
Sbjct: 110 VEPPEEAK------VYVGNLPYDVDSERLAQLFEQAGVVEVAEVIYNRETDRSRGFGFVT 163
Query: 86 YATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
+T+E A KA+E + ++G ++ V A PR
Sbjct: 164 MSTVEEADKAVEMLHRYDVNGRLLTVNKAAPR 195
>gi|297598418|ref|NP_001045556.2| Os01g0974600 [Oryza sativa Japonica Group]
gi|215768629|dbj|BAH00858.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619969|gb|EEE56101.1| hypothetical protein OsJ_04953 [Oryza sativa Japonica Group]
gi|255674125|dbj|BAF07470.2| Os01g0974600 [Oryza sativa Japonica Group]
Length = 116
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GLS T + L+D FS G ++ K++ H +G SKG+GFVK+A+ + A A+ M
Sbjct: 39 LFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHKM 98
Query: 100 DGKFLDGWVIFVEYA 114
G+ +DG I V YA
Sbjct: 99 GGEVIDGRNIRVHYA 113
>gi|390598508|gb|EIN07906.1| hypothetical protein PUNSTDRAFT_88604 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 343
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEV-VHAKIVKHRESGYSKGFGFVKYATL 89
+ Q + NLF+ L + + L DTFSAFG + AKI + +G SKG+GFV Y
Sbjct: 92 KKQLDVGANLFIGNLDENVDERVLYDTFSAFGVISTTAKIARDPSTGQSKGYGFVSYTDF 151
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
E++ AIE M+G+FL I V+YA
Sbjct: 152 ESSDAAIESMNGQFLMNKPITVQYA 176
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
E FV LS TTDE+L+D FS +G+V AK+V + SG S+GF FV + +A +
Sbjct: 4 EDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEE 63
Query: 95 AIEGMDGKFLDGWVIFVEYAKP 116
AIE M+G L+G I V+ A+P
Sbjct: 64 AIEDMNGLDLEGRAITVDKAQP 85
>gi|387169546|gb|AFJ66205.1| hypothetical protein 34G24.3 [Capsella rubella]
Length = 806
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L D+ L + FS+FGE+V AK++K R +G SK +GFVKYA ++ A A++
Sbjct: 479 TNLYIGFLPPMLDDDGLINLFSSFGEIVMAKVIKDRVTGLSKTYGFVKYADVQMANTAVQ 538
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G +G + V A
Sbjct: 539 AMNGYRFEGRTLAVRIA 555
>gi|225423629|ref|XP_002274983.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|359473083|ref|XP_003631246.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Vitis vinifera]
gi|297738010|emb|CBI27211.3| unnamed protein product [Vitis vinifera]
gi|297738011|emb|CBI27212.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 52/80 (65%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
++ + V+ LS T+ +L++ FS FG++V +VK + + +G+ F++Y + + A A+
Sbjct: 37 ASRIMVTNLSYATSKSSLQEEFSKFGQIVEVDVVKDKAAKRPRGYAFIQYTSQDHAMLAL 96
Query: 97 EGMDGKFLDGWVIFVEYAKP 116
E MD K+LDG V+ VE AKP
Sbjct: 97 ENMDHKYLDGRVVCVELAKP 116
>gi|327301915|ref|XP_003235650.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326463002|gb|EGD88455.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 149
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GL+ TTD+TLR+ FS FG + A +VK R++ S+GFGFV++++ A A+ M
Sbjct: 6 LFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNAM 65
Query: 100 DGKFLDGWVIFVEYA 114
+ + DG VI V+ A
Sbjct: 66 NNQEFDGRVIRVDKA 80
>gi|2645699|gb|AAC61787.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 165
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 48/67 (71%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ TTD++L++ FS +GE++ +KI+ RE+G S+GFGFV + ++ AI+GM
Sbjct: 9 CFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKSMRDAIQGM 68
Query: 100 DGKFLDG 106
+ + LDG
Sbjct: 69 NSQELDG 75
>gi|384496545|gb|EIE87036.1| hypothetical protein RO3G_11747 [Rhizopus delemar RA 99-880]
Length = 616
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S N+F+ L ++ L DTFSAFG ++ KI ESG SKG+GFV Y T EAA AI
Sbjct: 126 SGNVFIKNLDTSIDNKALHDTFSAFGNILSCKIALD-ESGNSKGYGFVHYETEEAADNAI 184
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+ +DG L+ ++V PR+
Sbjct: 185 KHVDGMLLNDKKVYVGRHIPRK 206
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS +G + AK++ E G SKGFGFV +++ + A KA+
Sbjct: 323 VNLYIKNLDDDIDDEKLRQEFSVYGVITSAKVMCD-EKGTSKGFGFVCFSSPDEATKAVT 381
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + I+V A+ ++
Sbjct: 382 EMNGRMIGSKPIYVALAQRKE 402
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V L + DE ++ FS FG + A +V+ E G SKGFGF+ + E A KA++
Sbjct: 220 TNVYVKNLDESINDEQFKEMFSKFGPITSA-LVQTDEEGKSKGFGFINFENYEDAHKAVD 278
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
++ +G ++V A+ +
Sbjct: 279 TLNETEHNGKTLYVARAQKK 298
>gi|303275187|ref|XP_003056892.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461244|gb|EEH58537.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 302
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLFV L ++ L DTFSAFG V+ KI++ +SG S+GFGFV Y + EAA AIE
Sbjct: 96 NLFVGNLDSELDEKLLYDTFSAFGVVITTPKIMRDPDSGNSRGFGFVSYDSFEAADAAIE 155
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G+FL I V +A
Sbjct: 156 AMNGQFLCNRPISVTFA 172
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
++V L T+E L + F G VV+ + K R S +G+GFV++A E A AI+ +
Sbjct: 10 IYVGNLDLACTEEILWEVFVQAGPVVNVYVPKDRVSNAHQGYGFVEFANEEDADYAIKVL 69
Query: 100 DGKFLDG 106
+ L G
Sbjct: 70 NMIKLHG 76
>gi|544416|sp|Q05966.1|GRP10_BRANA RecName: Full=Glycine-rich RNA-binding protein 10
gi|17819|emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus]
Length = 169
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
+E FV GL+ T D L TFS FGEV+ +KI+ RE+G S+GFGFV + ++
Sbjct: 2 SEVEYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMK 61
Query: 94 KAIEGMDGKFLDGWVIFVEYAKP 116
AI+ M+GK LDG I V A+
Sbjct: 62 DAIDEMNGKELDGRTITVNEAQS 84
>gi|302762761|ref|XP_002964802.1| hypothetical protein SELMODRAFT_69504 [Selaginella moellendorffii]
gi|300167035|gb|EFJ33640.1| hypothetical protein SELMODRAFT_69504 [Selaginella moellendorffii]
Length = 94
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 44 GLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKF 103
GL+ D TLR F+ +GEV A+++ RE+G S+GFGFV + A A++GMDG
Sbjct: 1 GLAWGVDDGTLRTAFANYGEVTEARVIMDRETGRSRGFGFVTFENDNEAKAAVQGMDGHE 60
Query: 104 LDGWVIFVEYAKPRQPPTLPSQN 126
L G I V+YA R P+ P Q+
Sbjct: 61 LGGRSIRVDYASDR--PSAPRQD 81
>gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemum crystallinum]
Length = 306
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 16/112 (14%)
Query: 8 AAPRGLRRLFSTSPFSSSLNPPQRP--QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVV 65
AAPRG R P+RP + EPS ++V L + L FS G+V+
Sbjct: 204 AAPRGSR--------------PERPPREFEPSCRVYVGNLPWDVDNARLEQVFSEHGKVL 249
Query: 66 HAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
A++V RE+G S+GFGFV A+ AI +DG+ LDG I V A+ R
Sbjct: 250 SARVVSDRETGRSRGFGFVSMASESEMNDAIAALDGQTLDGRAIRVNVAEER 301
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV L E L F G V A+++ +RE+ S+GFGFV +T+E A KA+E +
Sbjct: 130 LFVGNLPYDVDSERLAQIFDGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEML 189
Query: 100 DGKFLDGWVIFVEYAKPR 117
+G ++G ++ V A PR
Sbjct: 190 NGFDMNGRLLTVNKAAPR 207
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S N+F+ L K + L DTFSAFG ++ K+ SG SKGFGFV++ T EAA KAI
Sbjct: 116 SGNIFIKNLDKAIDHKALHDTFSAFGSILSCKVATD-SSGQSKGFGFVQFDTEEAALKAI 174
Query: 97 EGMDGKFLDGWVIFV 111
E ++G L+ +FV
Sbjct: 175 EKLNGMLLNDKQVFV 189
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
N+FV L++ T++E L++ F FG + +++ E G SK FGFV + + A +++E
Sbjct: 208 NNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGE-GKSKCFGFVNFENADDAARSVE 266
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
++GK +DG +V A+ +
Sbjct: 267 ALNGKKVDGKEWYVGKAQKK 286
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NL+V L D+ L++ F+ FG + K+++ +G S+G GFV +++ E A +A+
Sbjct: 312 NLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRD-PNGISRGSGFVAFSSPEEAARALAE 370
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 371 MNGRMIVSKPLYVALAQRKE 390
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
+T+L+V L TD L D F+ G+VV ++ + S S G+G+V Y+ A +A+
Sbjct: 28 TTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRAL 87
Query: 97 EGMDGKFLDGWVIFVEYA 114
+ ++ L+G I V Y+
Sbjct: 88 DVLNFTPLNGNPIRVMYS 105
>gi|357628251|gb|EHJ77641.1| poly A binding protein [Danaus plexippus]
Length = 601
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + E+G SKG+GFV + T EAA K+IE
Sbjct: 91 NVFIKNLDKAIDNKAMYDTFSAFGNILSCKVAQD-ENGASKGYGFVHFETEEAANKSIEK 149
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 150 VNGMLLNGKKVYVGRFIPRK 169
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 287 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 344
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 345 EMNGRIVGTKPLYVALAQRKE 365
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + +DE LRD F +G + K++ ++E G S+GFGFV + +AA +A
Sbjct: 183 TNVYVKNFGEDFSDEMLRDMFEKYGRITSHKVM-YKEDGSSRGFGFVAFEDPDAAERACL 241
Query: 98 GMDGK-FLDGWVIFVEYAKPR 117
++GK ++G ++V A+ +
Sbjct: 242 ELNGKELVEGKPLYVGRAQKK 262
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+ E + +FV GLS ++ L F++ GEVV A+IV R++ S+GFG+V++A +++A
Sbjct: 199 EQEATNTVFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEFADVDSA 258
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPRQP 119
KAIE +GK LDG + V +A R+P
Sbjct: 259 IKAIE-FEGKELDGRAVRVNFANARKP 284
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P+ L++ L TT++ + +TF +G+V ++ RE+G +KGFG+V + + A A
Sbjct: 300 PADTLWIGSLPFDTTEDHIYETFGEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATAA 359
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
+E ++G I +++A P+
Sbjct: 360 LEALNGSEFGSRRIRIDFAPPK 381
>gi|297831910|ref|XP_002883837.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329677|gb|EFH60096.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVV-HAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLF+ L ++ L DTFSAFG V H KI++ ++G +GFGF+ Y + EA+ AIE
Sbjct: 113 NLFIGNLDPDVDEKMLYDTFSAFGMVADHPKIMRDPDTGNPRGFGFISYDSFEASDAAIE 172
Query: 98 GMDGKFLDGWVIFVEYA 114
M G++L I V YA
Sbjct: 173 AMSGQYLSSRQITVSYA 189
>gi|242025596|ref|XP_002433210.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212518751|gb|EEB20472.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 637
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFS FG ++ K+ + ESG SKG+GFV + T EAA K+I+
Sbjct: 100 NVFIKNLDKSIDNKAMYDTFSTFGNILSCKVAQD-ESGTSKGYGFVHFETEEAANKSIDK 158
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G +FV PR+
Sbjct: 159 VNGMLLNGKRVFVGKFIPRK 178
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V + DE LR F+ FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 296 VNLYVKNIDDNIDDERLRKEFTPFGTITSAKVM--LEDGRSKGFGFVCFSSAEEATKAVT 353
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 354 EMNGRIVGSKPLYVALAQRKE 374
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + +D+ LR+ F +G + K++ ++ G SKGFGFV + EAA KA+
Sbjct: 192 TNVYVKNFGEDFSDDLLREMFEKYGRITSHKVMS-KDDGKSKGFGFVAFEDPEAAEKAVA 250
Query: 98 GMDGK-FLDGWVIFVEYAKPR 117
++GK ++G +FV A+ +
Sbjct: 251 SLNGKEIVEGKPLFVGRAQKK 271
>gi|149391365|gb|ABR25700.1| chloroplast 28 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 186
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 58/112 (51%), Gaps = 12/112 (10%)
Query: 8 AAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHA 67
AAPRG R PP+ Q PS ++V L + D L FS G+VV A
Sbjct: 83 AAPRGAR----------VERPPR--QFGPSFRIYVGNLPWQVDDSRLVQLFSEHGKVVDA 130
Query: 68 KIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
++V RE+G S+GFGFV AT E AI +DG+ LDG + V A+ R P
Sbjct: 131 RVVYDRETGRSRGFGFVTMATQEELDDAIAALDGQSLDGRALRVNVAEERPP 182
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 26 LNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVK 85
+ PP+ ++V L E L F G V ++++ +RE+ S+GFGFV
Sbjct: 1 VEPPE------EAKVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVT 54
Query: 86 YATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
+T+E A KA+E +DG ++ V A PR
Sbjct: 55 MSTVEEAEKAVEMFHRYDVDGRLLTVNKAAPR 86
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S N+F+ L K + L DTFSAFG ++ K+ SG SKGFGFV++ T EAA KAI
Sbjct: 116 SGNIFIKNLDKAIDHKALHDTFSAFGSILSCKVATD-SSGQSKGFGFVQFDTEEAALKAI 174
Query: 97 EGMDGKFLDGWVIFV 111
E ++G L+ +FV
Sbjct: 175 EKLNGMLLNDKQVFV 189
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
N+FV L++ T++E L++ F FG + +++ E G SK FGFV + + A +++E
Sbjct: 208 NNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGE-GKSKCFGFVNFENADDAARSVE 266
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
++GK +DG +V A+ +
Sbjct: 267 ALNGKKVDGKEWYVGKAQKK 286
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NL+V L D+ L++ F+ FG + K+++ +G S+G GFV +++ E A +A+
Sbjct: 312 NLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRD-PNGISRGSGFVAFSSPEEAARALAE 370
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 371 MNGRMIVSKPLYVALAQRKE 390
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
+T+L+V L TD L D F+ G+VV ++ + S S G+G+V Y+ A +A+
Sbjct: 28 TTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRAL 87
Query: 97 EGMDGKFLDGWVIFVEYA 114
+ ++ L+G I V Y+
Sbjct: 88 DVLNFTPLNGNPIRVMYS 105
>gi|224131664|ref|XP_002321147.1| predicted protein [Populus trichocarpa]
gi|222861920|gb|EEE99462.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 36 PSTN--LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
P+TN LFV+GLS +++L+D FS+FG+V I+ R SG S+GFGFV + + A
Sbjct: 14 PATNNKLFVAGLSWSVDEKSLKDAFSSFGDVTEVNILYDRNSGRSRGFGFVSFCKEDEAV 73
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPR 117
A + MDGK L G + + YA R
Sbjct: 74 SAKDAMDGKALLGRPLRISYALER 97
>gi|124268989|ref|YP_001022993.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
gi|124261764|gb|ABM96758.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
Length = 162
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L+V L+ D+ L+ F FG V AK++ R++G SKGFGFV+ + A AIEGM
Sbjct: 5 LYVGNLAYSVRDDDLQQAFGEFGAVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQAAIEGM 64
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
+G+ L G I V A+PR+
Sbjct: 65 NGQSLSGRAIVVNEARPRE 83
>gi|160888973|ref|ZP_02069976.1| hypothetical protein BACUNI_01393 [Bacteroides uniformis ATCC 8492]
gi|270293903|ref|ZP_06200105.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|423305982|ref|ZP_17283981.1| hypothetical protein HMPREF1072_02921 [Bacteroides uniformis
CL03T00C23]
gi|423309474|ref|ZP_17287464.1| hypothetical protein HMPREF1073_02214 [Bacteroides uniformis
CL03T12C37]
gi|156861440|gb|EDO54871.1| hypothetical protein BACUNI_01393 [Bacteroides uniformis ATCC 8492]
gi|270275370|gb|EFA21230.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|392679826|gb|EIY73203.1| hypothetical protein HMPREF1072_02921 [Bacteroides uniformis
CL03T00C23]
gi|392684514|gb|EIY77839.1| hypothetical protein HMPREF1073_02214 [Bacteroides uniformis
CL03T12C37]
Length = 101
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+++SGL+ TTD L D FS +GEV A+I+ RE+ S+GFGFV+ A KAI+
Sbjct: 2 NIYISGLNFSTTDADLNDLFSEYGEVSSARIITDRETRRSRGFGFVEMPDDAAGQKAIDE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G D I V A+PR+
Sbjct: 62 LNGAEFDHKQISVNVARPRE 81
>gi|404403808|ref|ZP_10995392.1| RNP-1 like RNA-binding protein [Alistipes sp. JC136]
Length = 105
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++VS LS T+ E L + F+ FGEV A ++ RE+G S+GFGFV+ E A KA+E
Sbjct: 2 NIYVSHLSWGTSSEGLGNLFAQFGEVASANVITDRETGRSRGFGFVEMPDDEQARKAMEQ 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G +G I V A+PR+
Sbjct: 62 LNGTNFEGQTITVNEARPRE 81
>gi|310798668|gb|EFQ33561.1| 4 family polyadenylate binding protein [Glomerella graminicola
M1.001]
Length = 768
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V ++ TD+ RD F+AFG+V + + + +E G S+GFGFV + T EAA KA++
Sbjct: 245 TNIYVKNIANEVTDDEFRDLFTAFGDVTSSSLARDQE-GKSRGFGFVNFTTHEAAAKAVD 303
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
++GK G ++V A+ +
Sbjct: 304 DLNGKDFRGQDLYVGRAQKKH 324
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L ++ L DTF+AFG ++ K+ + E G SKG+GFV Y T EAA +AI+
Sbjct: 153 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-EHGNSKGYGFVHYETDEAASQAIKH 211
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+ ++V + P++
Sbjct: 212 VNGMLLNEKKVYVGHHIPKK 231
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 32 PQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEA 91
P + S +L+V L T+ L + FS G V ++ + + S G+ +V Y T
Sbjct: 58 PHPQASASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSD 117
Query: 92 AGKAIEGMDGKFLDG 106
KA+E ++ + G
Sbjct: 118 GEKALEELNYTLIKG 132
>gi|315057077|ref|XP_003177913.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
gi|311339759|gb|EFQ98961.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GL+ TTD+TLR+ FS FG + A +VK R++ S+GFGFV++++ A A+ M
Sbjct: 6 LFIGGLAWHTTDDTLREGFSQFGTIEEAIVVKDRDTNRSRGFGFVRFSSEAEADAALNAM 65
Query: 100 DGKFLDGWVIFVEYA 114
+ + DG VI V+ A
Sbjct: 66 NNQEFDGRVIRVDKA 80
>gi|389749090|gb|EIM90267.1| hypothetical protein STEHIDRAFT_93143 [Stereum hirsutum FP-91666
SS1]
Length = 338
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEV-VHAKIVKHRESGYSKGFGFVKYATL 89
+ Q + NLF+ L + + L DTFSAFG + AKI + ++G SKG+GFV Y
Sbjct: 92 KKQLDVGANLFIGNLDENVDERLLYDTFSAFGVMATTAKIARDPQTGQSKGYGFVAYTDF 151
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
E++ A+E M+G+FL I V+YA
Sbjct: 152 ESSDAAVESMNGQFLMNKAITVQYA 176
>gi|255939157|ref|XP_002560348.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584970|emb|CAP83009.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S NLF+ LS +E L+ FS FGE+ +IV RESG S+GFG+V+Y + A KA+
Sbjct: 251 SANLFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRESGRSRGFGYVEYTSAADAAKAM 310
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQ---YGRQ 135
E G LDG I ++YA PRQ P Q+ T + YG Q
Sbjct: 311 EAKKGTDLDGRTINLDYAAPRQ--ANPQQDRTQDRARSYGDQ 350
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 48/81 (59%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S LFV L T++ L + F A G V+ ++ +E+G KGFG+V++++++ A A
Sbjct: 355 SDTLFVGNLPFSATEDALHEVFGAHGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKAAH 414
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
++G L+G + ++++ PR
Sbjct: 415 GALNGHELEGRAVRLDFSTPR 435
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQR---PQAEPST------NLFVSGLSKRTTDETLRDTFSA 60
PR R T F P R Q +PS N+F+ L K ++ L DTFSA
Sbjct: 62 PRDSERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSA 121
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
FG ++ K+V E+G SKG+GFV + T EAA +AIE M+G L+ +FV K R+
Sbjct: 122 FGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK 177
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 250 EMNGKELNGKQIYVGRAQ 267
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|297825019|ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
gi|297326231|gb|EFH56651.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T D L FS +G+VV +KI+ RE+G S+GFGFV + ++
Sbjct: 4 ADVEYRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMK 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AIEGM+G+ LDG I V A+
Sbjct: 64 DAIEGMNGQELDGRSITVNEAQ 85
>gi|440797930|gb|ELR19004.1| polyadenylate-binding protein family protein [Acanthamoeba
castellanii str. Neff]
Length = 462
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V + G SKG+GFV Y T EAA AI
Sbjct: 99 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVTDGK-GNSKGYGFVHYETSEAADSAIAK 157
Query: 99 MDGKFLDGWVIFV 111
++GK L+G +++V
Sbjct: 158 VNGKMLNGKIVYV 170
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSA--FGEVVHAKIVKHRESGYSKGFGFVKYA 87
+R Q NL++ L DE L FSA FG++ K++ + G S+GFGFV Y
Sbjct: 280 ERAQKYQGINLYIKNLDDTVNDEELHKLFSALPFGQITSCKVMSD-DKGNSRGFGFVCYT 338
Query: 88 TLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
E A KA+ M+GK + I+V A+ +
Sbjct: 339 NPEDASKAVSEMNGKMVANKPIYVALAERKD 369
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 32 PQAEPS--TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKH-RESGYSKGFGFVKYAT 88
P ++P TN+++ L + T+E L+ F AFG V A ++K R+ G + F FV +
Sbjct: 181 PGSDPEKFTNIYIKNLGEAYTEEDLKRDFGAFGTVQSAVLMKDPRDIG--RQFAFVNFED 238
Query: 89 LEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
EAA +A E ++G+ L ++V A+ +
Sbjct: 239 HEAAHRATEELNGRKLGDKEVYVGRAQKK 267
>gi|432095458|gb|ELK26654.1| Polyadenylate-binding protein 4 [Myotis davidii]
Length = 657
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 182 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PTGKSKGFGFVSYEKHEDA 240
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 241 NKAVEEMNGKEISGKVIFVGRAQKK 265
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 96 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 153
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 154 MNGMLLNDRKVFVGRFKSRK 173
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + A+++ E G SKGFGFV +++ E A KA+
Sbjct: 290 VNLYIKNLDDTIDDEKLRKEFSPFGSITRAEVM--LEDGRSKGFGFVCFSSPEEATKAVT 347
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 348 EMNGRIVGSKPLYVALAQRKE 368
>gi|357472741|ref|XP_003606655.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355507710|gb|AES88852.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 112
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 16 LFSTSPFSSSLNPPQRPQA------EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKI 69
L S+ ++ N PQ ST LF++GLS T + LRDTF G+++ K+
Sbjct: 5 LTSSKLIATIANTRTLPQLLLCVRHHSSTKLFIAGLSYNTNETVLRDTFEQHGQIIEVKV 64
Query: 70 VKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
+ + +G SKG+GFV++ + AA A + + G+ +DG I V YA
Sbjct: 65 ICNHRTGESKGYGFVRFNSETAAATARKELHGQIVDGRRIRVGYA 109
>gi|357457753|ref|XP_003599157.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355488205|gb|AES69408.1| Cold-inducible RNA-binding protein [Medicago truncatula]
Length = 134
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
++ +FV GL+ TT+E L + FS +G VV A IV ++ KGFG+V +A E A KA
Sbjct: 31 TSKIFVKGLAFSTTEEKLAEAFSQYGNVVKADIVLNKAKKRCKGFGYVTFAEEEEARKAQ 90
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTN 129
GM+GK L G V++V+ P + Q N
Sbjct: 91 IGMNGKILHGRVLYVDMDPPNEQKNKIKQATKN 123
>gi|403271841|ref|XP_003927812.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Saimiri boliviensis boliviensis]
Length = 647
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R +A TN+++ DE L+D FS +G+ + K++ SG SKGFGFV + + E
Sbjct: 460 RSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHE 518
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
AA KA+E M+G+ ++G +IFV A+ +
Sbjct: 519 AAKKAVEEMNGRDINGQLIFVARAQKK 545
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++TL + FSAFG ++ +K++ + SKG+ FV + AA +AIE
Sbjct: 376 NVFIKNLDKSIDNKTLYEHFSAFGRILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEE 433
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+GK L G +FV K RQ
Sbjct: 434 MNGKLLQGCKVFVGRFKSRQ 453
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R + L+V L DE LR FS+FG + K+++ E G SKGFG + +++
Sbjct: 562 ERIRGCQVVKLYVKNLDDTIDDEKLRKEFSSFGSISRVKVMQ--EEGQSKGFGLICFSSP 619
Query: 90 EAAGKAIEGMDGKFL 104
E A KA+ M+G+ L
Sbjct: 620 EDALKAMTEMNGRIL 634
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
+L+V L T++ L FSA G V+ +I + + + S G+ +V + L A KA++
Sbjct: 288 SLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQLTRRSLGYAYVNFLHLADAQKALDT 347
Query: 99 MDGKFLDGWVIFVEYAK 115
M+ + G I + +++
Sbjct: 348 MNFDVIQGKSIRLMWSQ 364
>gi|296424721|ref|XP_002841895.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638146|emb|CAZ86086.1| unnamed protein product [Tuber melanosporum]
Length = 392
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
E LFV L ++TL DTF+ FG +V A + + G SKGFGF+ Y + EA+ K
Sbjct: 98 EVGAELFVGNLDPMVDEKTLFDTFTTFGNLVSAPKIARDDQGISKGFGFISYDSFEASDK 157
Query: 95 AIEGMDGKFLDGWVIFVEYA 114
AIE M +FL I V+YA
Sbjct: 158 AIESMHNQFLMNKEINVQYA 177
>gi|332374002|gb|AEE62142.1| unknown [Dendroctonus ponderosae]
Length = 634
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L + ++ + DTFSAFG ++ K+ + E+G SKG+GFV + T EAA K+IE
Sbjct: 100 NVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQD-ENGTSKGYGFVHFETEEAANKSIEK 158
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 159 VNGMLLNGKKVYVGRFIPRK 178
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + ++E LR+ F FG++ K++ ++ G SKGFGFV + + EAA A++
Sbjct: 192 TNVYVKNFGEDLSEEQLRNMFEKFGKITSYKVMS-KDDGKSKGFGFVAFESPEAAETAVD 250
Query: 98 GMDGK-FLDGWVIFVEYAKPR 117
++GK ++G ++V A+ +
Sbjct: 251 ALNGKELVEGKPLYVGRAQKK 271
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRE------SGYSKGFGFVKYATLEA 91
NL+V L DE LR F+ FG + AK++ + SKGFGFV +++ E
Sbjct: 296 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMIEENKTESFITTRSKGFGFVCFSSPEE 355
Query: 92 AGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
A KA+ M+G+ + ++V A+ ++
Sbjct: 356 ATKAVTEMNGRIVGSKPLYVALAQRKE 382
>gi|367025775|ref|XP_003662172.1| hypothetical protein MYCTH_2314855 [Myceliophthora thermophila ATCC
42464]
gi|347009440|gb|AEO56927.1| hypothetical protein MYCTH_2314855 [Myceliophthora thermophila ATCC
42464]
Length = 324
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P +NLFV+G+ R + + F +GEV +I++ SG S+GFGFVK T E A A
Sbjct: 68 PGSNLFVTGIHPRLEESEITRLFEKYGEVEKCQIMRDPHSGESRGFGFVKMVTSEQADAA 127
Query: 96 IEGMDGKFLDGWVIFVEYA---KPRQP 119
+EG+ G+ ++G + +E A +PR P
Sbjct: 128 MEGLRGEVIEGRTLNIEKARRSRPRTP 154
>gi|357620131|gb|EHJ72437.1| putative U11/U12 snRNP 35K [Danaus plexippus]
Length = 181
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 58/91 (63%)
Query: 22 FSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGF 81
+S P ++ + +P+ +FV+ L+ RTT++T+ FS FG+V++ ++VK +G SK +
Sbjct: 38 LNSEYVPNKKVKGDPNHTIFVARLNPRTTEDTIYSEFSKFGKVINCRLVKDIVTGKSKQY 97
Query: 82 GFVKYATLEAAGKAIEGMDGKFLDGWVIFVE 112
FV+Y L + A++ M+ ++LD + I VE
Sbjct: 98 AFVEYENLSSLDGALKDMNNEYLDSFEIIVE 128
>gi|413934108|gb|AFW68659.1| hypothetical protein ZEAMMB73_687460 [Zea mays]
Length = 270
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVV-HAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLF+ L ++ L DTFSAFG +V + KI++ E+G S+GFGFV Y + E++ +AIE
Sbjct: 26 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIE 85
Query: 98 GMDGKFLDGWVIFVEYA 114
M+ + L I V YA
Sbjct: 86 AMNNQHLCNRPITVSYA 102
>gi|356526775|ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 146
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
S LFV+GLS T + LRD F GE++ K++ +G S+G+GFV++ + A
Sbjct: 55 HSSIKLFVTGLSYDTNEPVLRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFLSETIAAA 114
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQ 125
+ M+G+ LDG I V YA + +LP+
Sbjct: 115 THKEMNGQILDGRCIRVSYAHKGERLSLPNN 145
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
Length = 174
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST ++V LS TTD+TLR FS FG+V+ + +++ RE+G S+GFGFV +++ A AI
Sbjct: 2 STKVYVGNLSWNTTDDTLRQAFSNFGQVLDSIVMRDRETGRSRGFGFVTFSSSGEAESAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
++ + LDG I V A R
Sbjct: 62 SSLNEQELDGRRIKVNLANAR 82
>gi|410899897|ref|XP_003963433.1| PREDICTED: embryonic polyadenylate-binding protein-like [Takifugu
rubripes]
Length = 606
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ F+AFG + +++K E G S+GFGFV +A E A KA++
Sbjct: 191 TNIYIKNFGEDYNDEKLKEVFAAFGRTLSVRVMKD-ERGRSRGFGFVNFAHHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G VI+V A+ R
Sbjct: 250 EMNGKELNGKVIYVGRAQKR 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ + + ++ L DTFSAFG ++ K+V E G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNMDESIDNKALYDTFSAFGNILSCKVVCD-ERG-SKGYGFVHFETEEAANRAIET 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV + K R+
Sbjct: 158 MNGMLLNDRKVFVGHFKSRK 177
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R Q NL+V L DE LR F+ +G + AK++ + S+GFGFV +++ E
Sbjct: 287 RIQRYQGVNLYVKNLDDSIDDERLRKEFAPYGTITSAKVMT--DGPQSRGFGFVCFSSPE 344
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
A KA+ M+G+ + ++V A+ R+
Sbjct: 345 EATKAVTEMNGRIVATKPLYVALAQRRE 372
>gi|410098203|ref|ZP_11293182.1| hypothetical protein HMPREF1076_02360 [Parabacteroides goldsteinii
CL02T12C30]
gi|409222476|gb|EKN15418.1| hypothetical protein HMPREF1076_02360 [Parabacteroides goldsteinii
CL02T12C30]
Length = 126
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NL++S LS TD L + F+ +GE++ A+++ RE+G S+GFGFV+ A KAIE
Sbjct: 2 NLYISNLSYNVTDADLNELFADYGEILSARVITDRETGRSRGFGFVELKDDNLAKKAIEE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQP 119
++ D VI V A+PR+
Sbjct: 62 LNQATYDEKVINVTEARPRED 82
>gi|324509105|gb|ADY43836.1| Polyadenylate-binding protein 1, partial [Ascaris suum]
Length = 661
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQR---PQAEPST------NLFVSGLSKRTTDETLRDTFSA 60
P R T F P R Q +PS N+F+ L K ++ + DTFS
Sbjct: 70 PADAERALDTMNFDVMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSM 129
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
FG ++ K+ ES SKG+GFV + T E+A KAIE ++G L+G ++V +PR
Sbjct: 130 FGNILSCKVANDEESN-SKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPR 185
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R Q NL+V L DE LR F ++G++ AK++ ++G SKGFGFV +
Sbjct: 297 ERMQRYQGVNLYVKNLDDTVDDEVLRQNFESYGKITSAKVMCD-DNGRSKGFGFVCFEKP 355
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
+ A KA+ M+GK + ++V A+ ++
Sbjct: 356 DEATKAVTEMNGKMMCTKPLYVALAQRKE 384
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+F+ + E L F+ FG++ ++ + G SKGFGFV + E A KA+
Sbjct: 200 TNVFIKNFADELDKEKLEKLFAKFGKITSCAVMSDAD-GKSKGFGFVAFENPEDAEKAVN 258
Query: 98 GM 99
M
Sbjct: 259 EM 260
>gi|149023879|gb|EDL80376.1| rCG31475, isoform CRA_b [Rattus norvegicus]
Length = 656
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE LR+ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDC-SGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G IFV A+ +
Sbjct: 245 NKAVEEMNGKEMSGKSIFVGRAQKK 269
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAANKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|91095037|ref|XP_975975.1| PREDICTED: similar to poly A binding protein isoform 4 [Tribolium
castaneum]
gi|270014772|gb|EFA11220.1| hypothetical protein TcasGA2_TC005185 [Tribolium castaneum]
Length = 607
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L + ++ + DTFSAFG ++ K+ + E+G SKG+GFV + T EAA K+IE
Sbjct: 100 NVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQD-ENGTSKGYGFVHFETEEAANKSIEK 158
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 159 VNGMLLNGKKVYVGRFIPRK 178
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + T+E LR F +G++ KI+ ++ G SKGFGFV + + EAA A+E
Sbjct: 192 TNVYVKNFGEDLTEEQLRTMFEKYGKITSYKIMS-KDDGKSKGFGFVAFESPEAAETAVE 250
Query: 98 GMDGK-FLDGWVIFVEYAKPR 117
++GK +DG ++V A+ +
Sbjct: 251 ALNGKEIIDGKPLYVGRAQKK 271
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E SKGFGFV +++ E A KA+
Sbjct: 296 VNLYVKNLDDTIDDERLRKEFSPFGTITSAKVM--MEDNRSKGFGFVCFSSPEEATKAVT 353
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 354 EMNGRIVGSKPLYVALAQRKE 374
>gi|149023878|gb|EDL80375.1| rCG31475, isoform CRA_a [Rattus norvegicus]
Length = 660
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE LR+ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDC-SGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G IFV A+ +
Sbjct: 245 NKAVEEMNGKEMSGKSIFVGRAQKK 269
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAANKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|209976406|gb|ACJ04160.1| putative glycine-rich RNA-binding protein [Chorispora bungeana]
Length = 175
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T D L FS +G+VV +KI+ RE+G S+GFGFV + ++
Sbjct: 4 ADVEFRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMK 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AIEGM+G+ LDG I V A+
Sbjct: 64 DAIEGMNGQDLDGRSITVNEAQ 85
>gi|449486950|ref|XP_004157451.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 163
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ +FV GLS + D TLR FS +GEVV A++V ++G KGFGFV ++ E A AI+
Sbjct: 70 SKVFVGGLSYNSDDLTLRVAFSKYGEVVEARVVMDPDTGRCKGFGFVTFSAKEEASSAIK 129
Query: 98 GMDGKFLDGWVIFVEYA 114
+DGK L G I YA
Sbjct: 130 ALDGKDLGGRRIRCNYA 146
>gi|170579093|ref|XP_001894673.1| polyadenylate-binding protein 1 [Brugia malayi]
gi|158598601|gb|EDP36463.1| polyadenylate-binding protein 1, putative [Brugia malayi]
Length = 655
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQR---PQAEPST------NLFVSGLSKRTTDETLRDTFSA 60
P R T F P R Q +PS N+F+ L K ++ + DTFS
Sbjct: 69 PADAERALDTMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSM 128
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
FG ++ K+ ES SKG+GFV + T E+A KAIE ++G L+G ++V +PR
Sbjct: 129 FGNILSCKVANDEESN-SKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPR 184
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R Q NL+V L D+ L+ F A+G++ AK++ ++G SKGFGFV +
Sbjct: 296 ERMQRYQGVNLYVKNLDDTVNDDILKQNFEAYGKITSAKVMCD-DNGRSKGFGFVCFEKP 354
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
+ A KA+ M+GK + ++V A+ ++
Sbjct: 355 DEATKAVTEMNGKMMCTKPLYVALAQRKE 383
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + E L FS FG++ A ++ + G SKGFGFV + E A KA+
Sbjct: 199 TNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDAD-GKSKGFGFVAFENPEDAEKAVT 257
Query: 98 GM 99
M
Sbjct: 258 EM 259
>gi|425765484|gb|EKV04163.1| hypothetical protein PDIP_88470 [Penicillium digitatum Pd1]
gi|425778342|gb|EKV16473.1| hypothetical protein PDIG_20660 [Penicillium digitatum PHI26]
Length = 136
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ LF+ GLS T D +LR F FG V A +VK R++G S+GFGFV+++T E A A+
Sbjct: 2 SKLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDEEATAAMN 61
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+ + DG I V+ A R
Sbjct: 62 AMNNQEFDGRQIRVDKATER 81
>gi|2665654|gb|AAB88449.1| polyadenylate binding protein [Petromyzon marinus]
Length = 630
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA KAIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE L FS FG + AK++ E G S+GFGFV +++ E A KA+
Sbjct: 295 VNLYVKNLDDNINDERLWKEFSPFGTITSAKVMM--EEGRSRGFGFVCFSSPEEATKAVT 352
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 353 EMNGRIIGSKPLYVALAQRKE 373
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAF-GEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
TN+++ DE LR+ F + G+ + K++ E G SKGFGFV + E A KA+
Sbjct: 191 TNVYIKNFGDDMDDERLREYFEQYVGKTLSVKVMMD-EGGKSKGFGFVSFERHEDAQKAV 249
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
+ M+ K L+G I+V A+ +
Sbjct: 250 DEMNTKELNGRAIYVGRAQKK 270
>gi|1002380|gb|AAC47514.1| RRM-type RNA binding protein [Caenorhabditis elegans]
Length = 398
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
N+FV L ++ L DTFSAFG ++ KI++ +SG SKGF F+ +A+ EA+ A+E
Sbjct: 111 NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 170
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+FL I V YA R
Sbjct: 171 AMNGQFLCNRAITVSYAFKRD 191
>gi|444706907|gb|ELW48224.1| Polyadenylate-binding protein 4 [Tupaia chinensis]
Length = 692
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PTGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|312067233|ref|XP_003136646.1| hypothetical protein LOAG_01058 [Loa loa]
gi|307768188|gb|EFO27422.1| hypothetical protein LOAG_01058 [Loa loa]
Length = 655
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQR---PQAEPST------NLFVSGLSKRTTDETLRDTFSA 60
P R T F P R Q +PS N+F+ L K ++ + DTFS
Sbjct: 69 PADAERALDTMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSM 128
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
FG ++ K+ ES SKG+GFV + T E+A KAIE ++G L+G ++V +PR
Sbjct: 129 FGNILSCKVANDEESN-SKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPR 184
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R Q NL+V L D+ L+ F A+G++ AK++ ++G SKGFGFV +
Sbjct: 296 ERMQRYQGVNLYVKNLDDTVNDDILKQNFEAYGKITSAKVMCD-DNGRSKGFGFVCFEKP 354
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
+ A KA+ M+GK + ++V A+ ++
Sbjct: 355 DEATKAVTEMNGKMMCTKPLYVALAQRKE 383
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + E L FS FG++ A ++ + G SKGFGFV + E A KA+
Sbjct: 199 TNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDAD-GKSKGFGFVAFENPEDAEKAVT 257
Query: 98 GM 99
M
Sbjct: 258 EM 259
>gi|115532084|ref|NP_001021932.1| Protein SAP-49 [Caenorhabditis elegans]
gi|55977846|sp|Q09442.2|SF3B4_CAEEL RecName: Full=Splicing factor 3B subunit 4; AltName:
Full=Spliceosome-associated protein 49
gi|50511896|emb|CAB60993.2| Protein SAP-49 [Caenorhabditis elegans]
Length = 388
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
N+FV L ++ L DTFSAFG ++ KI++ +SG SKGF F+ +A+ EA+ A+E
Sbjct: 101 NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 160
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+FL I V YA R
Sbjct: 161 AMNGQFLCNRAITVSYAFKRD 181
>gi|259486065|tpe|CBF83611.1| TPA: glycine-rich RNA-binding protein, putative (AFU_orthologue;
AFUA_3G08580) [Aspergillus nidulans FGSC A4]
Length = 128
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GL+ TTD+ LR+ FS +G + A +VK R++ S+GFGFV++A+ A A+ M
Sbjct: 4 LFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMGAM 63
Query: 100 DGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQ 131
+ + DG +I V+ A R P+ N FQ
Sbjct: 64 NNQEFDGRIIRVDKASER-----PAARNGGFQ 90
>gi|67525063|ref|XP_660593.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
gi|40744384|gb|EAA63560.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
Length = 118
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GL+ TTD+ LR+ FS +G + A +VK R++ S+GFGFV++A+ A A+ M
Sbjct: 4 LFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMGAM 63
Query: 100 DGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQ 131
+ + DG +I V+ A R P+ N FQ
Sbjct: 64 NNQEFDGRIIRVDKASER-----PAARNGGFQ 90
>gi|281212020|gb|EFA86181.1| hypothetical protein PPL_00743 [Polysphondylium pallidum PN500]
Length = 602
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 51/85 (60%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+ P + TNL ++ + K + E LRD F+ FGE+V K+V R + + G+GFVKYAT
Sbjct: 145 EDPDLDALTNLIINNIPKHFSSEDLRDMFANFGEIVSYKVVTKRGNSKNMGYGFVKYATP 204
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
E A AIE M+G +D + V YA
Sbjct: 205 EGATAAIEQMNGHSIDLKFLKVSYA 229
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NL+V+ L + T E L + FS FGEVV KI+ +G S+ GFV ++ A A+
Sbjct: 240 NLYVNRLEPQVTKEDLAEAFSKFGEVVETKILVDPNTGSSRCVGFVHFSARRNALTALSA 299
Query: 99 MDG 101
M+G
Sbjct: 300 MNG 302
>gi|351724633|ref|NP_001238088.1| uncharacterized protein LOC100527061 [Glycine max]
gi|255631468|gb|ACU16101.1| unknown [Glycine max]
Length = 113
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 9/102 (8%)
Query: 26 LNPPQRPQAEPS---------TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESG 76
L+ ++P A PS + +FV GL+ TT+E L FS +G V+ A I+ ++
Sbjct: 12 LSHLKKPHASPSQLLFLRTMTSKVFVKGLAFSTTEEELAKAFSQYGSVLKANIILNKAKN 71
Query: 77 YSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
SKGFG+V +A E A KA M+GK L G VI+V+ P +
Sbjct: 72 RSKGFGYVIFAKEEEACKAQIDMNGKILHGRVIYVDVQLPNK 113
>gi|1346180|sp|P49310.1|GRP1_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP1A
gi|496233|gb|AAA59212.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 166
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D L FS +GEV+ +KI+ RE+G S+GFGFV + ++ AIEGM
Sbjct: 10 CFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAK 115
+G+ LDG I V A+
Sbjct: 70 NGQDLDGRSITVNEAQ 85
>gi|389608229|dbj|BAM17726.1| polyA-binding protein [Papilio xuthus]
Length = 619
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTF+AFG ++ K+ + E+G SKG+GFV + T EAA K+IE
Sbjct: 100 NVFIKNLDKTIDNKAMYDTFTAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSIEK 158
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+G ++V PR+
Sbjct: 159 VNGMLLNGKKVYVGRFIPRK 178
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 296 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 353
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 354 EMNGRIVGTKPLYVALAQRKE 374
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + +DE LR+ F +G + K++ ++E G S+GFGFV + +AA +A
Sbjct: 192 TNVYVKNFGEDFSDEMLREMFEKYGRITSHKVM-YKEDGSSRGFGFVAFEDPDAAERACM 250
Query: 98 GMDGK-FLDGWVIFVEYAKPR 117
++GK ++G ++V A+ +
Sbjct: 251 ELNGKELVEGKPLYVGRAQKK 271
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 28 PPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYA 87
PP P A +L+V L T+ L + FS G V+ ++ + + S G+ +V +
Sbjct: 5 PPNYPMA----SLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQ 60
Query: 88 TLEAAGKAIEGMDGKFLDGWVIFVEYAK 115
A +A+EGM+ + G I + +++
Sbjct: 61 QPADAERALEGMNFDIIKGRPIRIMWSQ 88
>gi|195024447|ref|XP_001985876.1| GH21052 [Drosophila grimshawi]
gi|193901876|gb|EDW00743.1| GH21052 [Drosophila grimshawi]
Length = 645
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQR---PQAEPST------NLFVSGLSKRTTDETLRDTFSA 60
P R T F N P R Q +PS N+F+ L K ++ + DTFSA
Sbjct: 53 PADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSA 112
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
FG ++ K+ E G+SKG+GFV + T EAA +I+ ++G L+G ++V PR+
Sbjct: 113 FGNILSCKVATD-EKGHSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRK 169
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ F +G++ K++ ++ G SKGFGFV Y T EAA A++
Sbjct: 183 TNVYIKNFTDEFDDEKLKENFEPYGKITSYKVMS-KDDGKSKGFGFVAYETTEAAEAAVQ 241
Query: 98 GMDGKFL-DGWVIFVEYAKPR 117
++GK + +G ++V A+ +
Sbjct: 242 ALNGKDMGEGKTLYVARAQKK 262
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS +G + AK++ E G SKGFGFV + + A A+
Sbjct: 287 VNLYVKNLDDSIDDERLRKEFSLYGTITSAKVMTD-EEGRSKGFGFVCFISPNEATCAVT 345
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
++G+ + ++V A+ ++
Sbjct: 346 ELNGRVVGSKPLYVALAQRKE 366
>gi|427387936|ref|ZP_18883921.1| hypothetical protein HMPREF9447_04954 [Bacteroides oleiciplenus YIT
12058]
gi|425725335|gb|EKU88208.1| hypothetical protein HMPREF9447_04954 [Bacteroides oleiciplenus YIT
12058]
Length = 94
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+++SGLS T D L + FSA+GE AK++ RE+G S+GFGFV+ KAI+
Sbjct: 2 NIYISGLSFGTNDADLNELFSAYGETSSAKVIMDRETGRSRGFGFVEMTNDAEGQKAIDE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G D I V A+PR+
Sbjct: 62 LNGAEYDQKTISVTVARPRE 81
>gi|59802519|gb|AAX07503.1| unknown [Gemmata sp. Wa1-1]
Length = 122
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
L+V LS TD L+D F+ +G VV A+++ R++G SKGFGFV+ T + A AI G
Sbjct: 41 KLYVGNLSWGVTDSQLQDMFTPYGSVVSAQVIMDRDTGRSKGFGFVEMGTDQEAQAAITG 100
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M G+ ++G + V A+P++
Sbjct: 101 MHGQVIEGRPLTVNEARPKK 120
>gi|390460450|ref|XP_002745401.2| PREDICTED: polyadenylate-binding protein 4-like [Callithrix
jacchus]
Length = 384
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R +A TN+++ DE L+D FS +G+ + K++ SG SKGFGFV + + E
Sbjct: 183 RSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHE 241
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
AA KA+E M+G+ ++G +IFV A+ +
Sbjct: 242 AAKKAVEEMNGRDINGQLIFVARAQKK 268
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++TL + FSAFG+++ +K++ + SKG+ FV + AA +AIE
Sbjct: 99 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEE 156
Query: 99 MDGKFLDGWVIFVEYAKPRQP 119
M+GK L G +FV K R+
Sbjct: 157 MNGKLLQGCKVFVGRFKSRKD 177
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 28 PPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYA 87
+R + L+V L DE LR+ FS+FG + K+++ E G SKGFG + ++
Sbjct: 283 KKERIRGCQVVKLYVKNLDDTIDDEKLRNEFSSFGSISRVKVMQ--EEGQSKGFGLICFS 340
Query: 88 TLEAAGKAIEGMDGKFL 104
+ E A KA+ M+G+ L
Sbjct: 341 SPEDALKAMTEMNGRIL 357
>gi|417403696|gb|JAA48646.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 660
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|355687608|gb|EHH26192.1| hypothetical protein EGK_16094 [Macaca mulatta]
gi|355749570|gb|EHH53969.1| hypothetical protein EGM_14691 [Macaca fascicularis]
Length = 370
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R +A TN+++ DE L+D FS +G+ + K++ SG SKGFGFV + + E
Sbjct: 183 RSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHE 241
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
AA KA+E M+G+ ++G +IFV A+ +
Sbjct: 242 AAKKAVEEMNGRDINGQLIFVGRAQKK 268
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R + L+V L DE LR+ FS+FG ++ K+++ + G SKGFGF+ +++L
Sbjct: 285 ERIRGYQGVKLYVKNLDDTIDDEKLRNEFSSFGSIIRVKVMQ--QEGQSKGFGFICFSSL 342
Query: 90 EAAGKAIEGMDGKFL 104
E A KA+ M+G FL
Sbjct: 343 EDATKAMIEMNGCFL 357
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++TL + FS FG+++ +K++ + SKG+ FV + AA +AIE
Sbjct: 99 NVFIKNLDKSIDNKTLYEHFSGFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEE 156
Query: 99 MDGKFLDGWVIFVEYAKPRQP 119
M+GK L +FV K R+
Sbjct: 157 MNGKLLKSCKVFVGRFKNRKD 177
>gi|312283439|dbj|BAJ34585.1| unnamed protein product [Thellungiella halophila]
Length = 259
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
+P F+ GL+ T+D LRD F +G ++ AK+V + SG S+GFGF+ + +A +
Sbjct: 4 DPEYRCFIGGLAWSTSDRGLRDAFEKYGHLLEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQ 118
AI M+G LDG I V+ A+P Q
Sbjct: 64 AIAAMNGMDLDGRTITVDKAQPHQ 87
>gi|198386356|ref|NP_001094008.1| polyadenylate-binding protein 4 [Rattus norvegicus]
gi|183985833|gb|AAI66452.1| Pabpc4 protein [Rattus norvegicus]
Length = 644
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE LR+ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDC-SGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G IFV A+ +
Sbjct: 245 NKAVEEMNGKEMSGKSIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAANKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|20257697|gb|AAM16014.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++ AIEGM
Sbjct: 13 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXXXRSAIEGM 72
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 73 NGKELDGRNITVNEAQS 89
>gi|224094731|ref|XP_002310211.1| predicted protein [Populus trichocarpa]
gi|222853114|gb|EEE90661.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVV-HAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLF+ L ++ L DTFSAFG +V + KI++ E+G S+GFGF+ Y + EA+ AIE
Sbjct: 94 NLFIGNLDPDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIE 153
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G++L I V YA
Sbjct: 154 AMNGQYLCNRQITVSYA 170
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 41 FVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMD 100
+V L + ++E L + F G VV+ + K R + +G+GFV++ + E A AI+ ++
Sbjct: 9 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 68
>gi|149023880|gb|EDL80377.1| rCG31475, isoform CRA_c [Rattus norvegicus]
Length = 630
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE LR+ FS FG+ + K+++ SG SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDC-SGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G IFV A+ +
Sbjct: 245 NKAVEEMNGKEMSGKSIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAANKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|328852276|gb|EGG01423.1| hypothetical protein MELLADRAFT_39080 [Melampsora larici-populina
98AG31]
Length = 701
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L + ++ L DTF+AFG+++ K+ +G SKG+GFV Y T E+A AI+G
Sbjct: 146 NIFIKNLDETIDNKALHDTFAAFGDILSCKVAMD-STGASKGYGFVHYVTAESAEAAIKG 204
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+ V+FV PR+
Sbjct: 205 VNGMQLNDKVVFVGIHVPRR 224
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL++ L T E L + FS +G V A V+ ESG +GFGFV Y E+A KA+E
Sbjct: 238 TNLYIKNLPTEVTTEELNEMFSKYGPVTSAA-VQADESGKHRGFGFVNYENHESASKAVE 296
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
+ K G +++V A+ R
Sbjct: 297 ALHDKDYKGNILYVARAQKR 316
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE L+ F FG + K++K + G S+GFGFV ++ + A KA+
Sbjct: 341 VNLYIKNLDDEYDDEKLQAEFLPFGTITSCKVMKD-DKGVSRGFGFVCFSAPDEATKAVA 399
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L ++V A+
Sbjct: 400 EMNGKMLGSKPLYVSLAQ 417
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 44/92 (47%)
Query: 24 SSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGF 83
S+ P P ++P+T+L+V L T+ L + FS G V ++ + + S G+ +
Sbjct: 43 STATPNASPASQPNTSLYVGELDPTVTEAMLYEIFSMIGPVSSIRVCRDAVTRRSLGYAY 102
Query: 84 VKYATLEAAGKAIEGMDGKFLDGWVIFVEYAK 115
V Y A +A+E ++ + + +++
Sbjct: 103 VNYLNAADAERALEQLNYSLIKNKACRIMWSQ 134
>gi|194466189|gb|ACF74325.1| unknown [Arachis hypogaea]
Length = 112
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 18 STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
++ PFS L P STNL V+GLS T + LRD F GE++ K++ +G
Sbjct: 17 NSCPFSPLLFPRH-----SSTNLLVTGLSYDTNETVLRDAFEQHGELIEVKVICDHVTGK 71
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
SKG+GFV++ T +A + M K +DG I V YA
Sbjct: 72 SKGYGFVRFTTETSAATGRKEMHKKIIDGRRIRVCYA 108
>gi|218189840|gb|EEC72267.1| hypothetical protein OsI_05421 [Oryza sativa Indica Group]
Length = 116
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GLS T + L+D FS G ++ K++ H +G SKG+GFVK+A+ + A A+ M
Sbjct: 39 LFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHKM 98
Query: 100 DGKFLDGWVIFVEYA 114
G+ +DG I V YA
Sbjct: 99 GGEVIDGRNIRVHYA 113
>gi|170093944|ref|XP_001878193.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646647|gb|EDR10892.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 302
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEV-VHAKIVKHRESGYSKGFGFVKYATL 89
+ Q + NLF+ L + + L DTFSAFG + AKI + SG SKG+GFV Y
Sbjct: 92 KKQLDVGANLFIGNLDENVDERLLYDTFSAFGIMATTAKIARDTGSGTSKGYGFVSYTDF 151
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
E++ A+E M+G+FL I V+YA
Sbjct: 152 ESSDAAVESMNGQFLMNKAITVQYA 176
>gi|223944069|gb|ACN26118.1| unknown [Zea mays]
gi|413956219|gb|AFW88868.1| hypothetical protein ZEAMMB73_204329 [Zea mays]
Length = 315
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P NL+V+GLS R TD L FS GEV+ A +V + S+GFGFV A ++ A +
Sbjct: 38 PGNNLYVTGLSARVTDRDLEKHFSTEGEVIDASVVYDPWTRESRGFGFVTMAAVKDADRC 97
Query: 96 IEGMDGKFLDGWVIFVEYAKPRQ 118
I+ +D L G VI VE AK R+
Sbjct: 98 IKYLDRSVLQGRVITVEKAKRRR 120
>gi|324512478|gb|ADY45169.1| Splicing factor 3B subunit 4 [Ascaris suum]
Length = 399
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
N+FV L ++ L DTFSAFG ++ KI++ E+G SKGF FV +A+ EA+ AIE
Sbjct: 101 NIFVGNLDPEVDEKLLFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFEASDSAIE 160
Query: 98 GMDGKFLDGWVIFVEYA 114
M G+FL I V YA
Sbjct: 161 AMSGQFLCNRAITVSYA 177
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
++V GL ++ TD L + F G VV + K R + +GFGFV++ E A AI+ M
Sbjct: 15 IYVGGLDEKVTDAILWELFVQSGPVVSVNMPKDRVTNSHQGFGFVEFMGEEDADYAIKIM 74
Query: 100 D 100
+
Sbjct: 75 N 75
>gi|422292932|gb|EKU20233.1| splicing factor 3B subunit 4, partial [Nannochloropsis gaditana
CCMP526]
Length = 301
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATL 89
R + NLF+ L+ ++ L DTFSAFG + K++ ++G++KGFGFV + +
Sbjct: 93 RKTVDVGANLFIGNLAAEVDEKDLYDTFSAFGGITQPPKVMFDPDTGHTKGFGFVSFDSF 152
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
EAA AIE M+G +L G I V+YA
Sbjct: 153 EAADYAIECMNGAYLGGRPICVQYA 177
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
Q ++ GL ++ T++ L + G VVH + + + +G + FGFV++ + E A
Sbjct: 8 QRNQDATVYCGGLDEKVTEDLLWELMQNVGPVVHVHMPRDKVTGMHQCFGFVEFRSEEDA 67
Query: 93 GKAIEGMD 100
A++ M+
Sbjct: 68 DYAVKIMN 75
>gi|410263252|gb|JAA19592.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|1346181|sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP2A
gi|496237|gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 169
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T + +L FS FGE+V +KI+ RE+G S+GFGFV + ++ AIEGM
Sbjct: 10 CFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAK 115
+G+ LDG I V A+
Sbjct: 70 NGQDLDGRSITVNEAQ 85
>gi|335423511|ref|ZP_08552532.1| RNP-1 like RNA-binding protein [Salinisphaera shabanensis E1L3A]
gi|334891336|gb|EGM29584.1| RNP-1 like RNA-binding protein [Salinisphaera shabanensis E1L3A]
Length = 90
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 47/76 (61%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V LS T D+ LR F AFGEV AK++ RE+G S+GFGFV+ A +AIEG
Sbjct: 2 NIYVGNLSWNTNDDELRGAFEAFGEVSSAKVIMDRETGRSRGFGFVEMPDDNDAKQAIEG 61
Query: 99 MDGKFLDGWVIFVEYA 114
M+ K L G + V A
Sbjct: 62 MNNKDLGGRTLRVNEA 77
>gi|308510552|ref|XP_003117459.1| CRE-SAP-49 protein [Caenorhabditis remanei]
gi|308242373|gb|EFO86325.1| CRE-SAP-49 protein [Caenorhabditis remanei]
Length = 389
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
N+FV L ++ L DTFSAFG ++ KI++ +SG SKGF F+ +A+ EA+ A+E
Sbjct: 101 NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 160
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+FL I V YA R
Sbjct: 161 AMNGQFLCNRAITVSYAFKRD 181
>gi|91094515|ref|XP_971941.1| PREDICTED: similar to poly A binding protein [Tribolium castaneum]
gi|270000753|gb|EEZ97200.1| hypothetical protein TcasGA2_TC004389 [Tribolium castaneum]
Length = 565
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + G SKG+GFV + ++EAA KAIE
Sbjct: 101 NVFIKNLDKSIDNKAMYDTFSAFGNILSCKVAID-DDGVSKGYGFVHFESIEAANKAIEK 159
Query: 99 MDGKFLDGWVIFVEYAKPR 117
++G L+G ++V PR
Sbjct: 160 VNGMLLNGKKVYVGKFIPR 178
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+++ L ++ LR FS FG + AK++ E G SKGFGFV ++T E A KAI
Sbjct: 297 NVYIKNLDDTFDNDRLRKEFSQFGAITSAKVMT--EGGRSKGFGFVCFSTPEEASKAITE 354
Query: 99 MDGKFLDGWVIFVEYAK 115
MDG+ + I+V A+
Sbjct: 355 MDGRMIGSKPIYVALAQ 371
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + T E L D F +G + +V G SKGFGF+ + E+A KA+
Sbjct: 193 TNVYVKNFGRNLTQEQLYDLFKNYGTITSC-VVMANPDGTSKGFGFIAFEEPESAEKAVT 251
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+ L+G ++V A+ +
Sbjct: 252 EMNNYELNGTNLYVGRAQKK 271
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P T+L+V L T+ L + FS G+++ ++ + + S G+ +V ++ A +
Sbjct: 10 PLTSLYVGDLHPDVTEALLYEKFSPAGQILSLRVCRDSRTKQSLGYAYVNFSQTIEAERV 69
Query: 96 IEGMDGKFLDGWVIFVEYAKPRQP 119
++ M+ L G I + +++ R P
Sbjct: 70 LDTMNFDLLKGKPIRIMWSQ-RDP 92
>gi|374812290|ref|ZP_09716027.1| RNP-1 like RNA-binding protein [Treponema primitia ZAS-1]
Length = 99
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L+V LS TT++ LR+ FS FG V +KI+ RE+G SKGFGF++ T E A AI G
Sbjct: 5 LYVGNLSYNTTEDGLRNLFSEFGSVASSKIIFDRETGNSKGFGFIEMGTDEEASAAIAGT 64
Query: 100 DGKFLDGWVIFVEYA--KPRQP 119
+G+ DG + V A KPR+
Sbjct: 65 NGREFDGRQLRVNEAMDKPRRD 86
>gi|67483728|ref|XP_657084.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474323|gb|EAL51698.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449705266|gb|EMD45349.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 136
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
T L++ L+ TDE+L+ F FG V K+V R+S SKGFGFV + E A KAIE
Sbjct: 2 TRLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIE 61
Query: 98 GMDGKFLDGWVIFVEYAKPRQP 119
M+ + L+G I V+ ++PR+
Sbjct: 62 EMNEQELEGRRIKVDVSRPREE 83
>gi|449439327|ref|XP_004137437.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 168
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ +FV GLS + D TLR FS +GEVV A++V ++G KGFGFV ++ E A AI+
Sbjct: 70 SKVFVGGLSYNSDDLTLRVAFSKYGEVVEARVVMDPDTGRCKGFGFVTFSAKEEASSAIK 129
Query: 98 GMDGKFLDGWVIFVEYA 114
+DGK L G I YA
Sbjct: 130 ALDGKDLGGRRIRCNYA 146
>gi|410263248|gb|JAA19590.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410263254|gb|JAA19593.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|417403591|gb|JAA48595.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 644
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G VIFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|289742137|gb|ADD19816.1| polyA-binding protein [Glossina morsitans morsitans]
Length = 653
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQR---PQAEPST------NLFVSGLSKRTTDETLRDTFSA 60
P R T F N P R Q +PS N+F+ L K ++ + DTFSA
Sbjct: 53 PADAERALDTMNFDLLRNKPIRIMWSQRDPSLRRSGIGNVFIKNLDKTIDNKAIYDTFSA 112
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
FG ++ K+ + G SKG+GFV + T EAA AIE ++G L+G ++V PR+
Sbjct: 113 FGNILSCKVATD-DKGTSKGYGFVHFETEEAANNAIEKVNGMLLNGKKVYVGKFIPRK 169
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R ++ NL+V L DE LR FS FG + AK++ E G SKGFGFV +
Sbjct: 279 KRQESVYGVNLYVKNLDDTIDDERLRKEFSLFGTITSAKVMTD-EDGRSKGFGFVCFVAP 337
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
A A+ M+G+ + ++V A+ ++
Sbjct: 338 HEATCAVTEMNGRVVGSKPLYVALAQRKE 366
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V DE L++ F +G++ K++ +E G SK FGFV + T EAA A+E
Sbjct: 183 TNVYVKNFGDDVDDEKLKEMFDPYGKITSYKVMI-KEDGKSKCFGFVAFETTEAAEAAVE 241
Query: 98 GMDGKFL-DGWVIFVEYAKPR 117
++GK + DG ++V A+ +
Sbjct: 242 ALNGKDMGDGKALYVARAQKK 262
>gi|218199217|gb|EEC81644.1| hypothetical protein OsI_25179 [Oryza sativa Indica Group]
Length = 343
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
+FV GLS TT+ TL FS +G+V+ ++V R++G S+GFGFV ++ A AI GM
Sbjct: 9 IFVGGLSWDTTERTLERAFSEYGKVIETQVVLERDTGRSRGFGFVTFSEPRAVDAAIRGM 68
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
LDG I V A+PR
Sbjct: 69 HNGELDGRTISVNKAQPRM 87
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S ++V LS TTD+TLR FS FG+V+ + +++ R++G S+GFGFV +++ + A AI
Sbjct: 2 SAKVYVGNLSWNTTDDTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQEADAAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
G++ + LDG I V A R
Sbjct: 62 GGLNEQELDGRRIKVNLANAR 82
>gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]
Length = 631
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKVLYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|403292062|ref|XP_003937076.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 630
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|145233965|ref|XP_001400355.1| glycine-rich RNA-binding protein 2 [Aspergillus niger CBS 513.88]
gi|134057294|emb|CAK37908.1| unnamed protein product [Aspergillus niger]
gi|350635078|gb|EHA23440.1| hypothetical protein ASPNIDRAFT_197860 [Aspergillus niger ATCC
1015]
Length = 116
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GL+ TTDETLR+ FS +G + A +VK ++ S+GFGFV++A+ A A+ M
Sbjct: 4 LFIGGLAWHTTDETLREGFSQYGTIEEAIVVKDHDTHRSRGFGFVRFASDVEADAAMNAM 63
Query: 100 DGKFLDGWVIFVEYAKPRQP 119
+ + DG VI V+ A +P
Sbjct: 64 NNQEFDGRVIRVDKASESRP 83
>gi|239611503|gb|EEQ88490.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327348484|gb|EGE77341.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ATCC
18188]
Length = 143
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV GL+ TTDETLR F +G + A +VK R++ S+GFGFV++A+ A A+ M
Sbjct: 4 LFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMNAM 63
Query: 100 DGKFLDGWVIFVEYAKPRQPPTLPSQNNTNF----QYGR 134
+ + DG VI V+ A R +Q N F QY R
Sbjct: 64 NNQEFDGRVIRVDKASDR-----STQRNDGFHGRGQYNR 97
>gi|208431836|ref|NP_001129126.1| polyadenylate-binding protein 4 isoform 3 [Homo sapiens]
gi|332808512|ref|XP_003308043.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730718|ref|XP_003775778.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pongo abelii]
gi|426329064|ref|XP_004025564.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Gorilla
gorilla gorilla]
gi|119627671|gb|EAX07266.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_f [Homo sapiens]
gi|410227602|gb|JAA11020.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|119627670|gb|EAX07265.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_e [Homo sapiens]
Length = 615
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|403292058|ref|XP_003937074.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 659
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|208431833|ref|NP_001129125.1| polyadenylate-binding protein 4 isoform 1 [Homo sapiens]
gi|332808508|ref|XP_513344.3| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pan
troglodytes]
gi|395730714|ref|XP_002811047.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pongo abelii]
gi|397488842|ref|XP_003815452.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pan paniscus]
gi|426329062|ref|XP_004025563.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Gorilla
gorilla gorilla]
gi|66267552|gb|AAH94755.1| PABPC4 protein [Homo sapiens]
gi|119627668|gb|EAX07263.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_c [Homo sapiens]
gi|410227598|gb|JAA11018.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410227604|gb|JAA11021.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|341882220|gb|EGT38155.1| hypothetical protein CAEBREN_32522 [Caenorhabditis brenneri]
gi|341882722|gb|EGT38657.1| hypothetical protein CAEBREN_06124 [Caenorhabditis brenneri]
Length = 388
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAI 96
N+FV L ++ L DTFSAFG ++ KI++ +SG SKGF F+ +A+ EA+ A+
Sbjct: 100 ANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTAL 159
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
E M+G+FL I V YA R
Sbjct: 160 EAMNGQFLCNRAITVSYAFKRD 181
>gi|157864926|ref|XP_001681171.1| RNA-binding protein 5-like protein [Leishmania major strain
Friedlin]
gi|68124466|emb|CAJ02310.1| RNA-binding protein 5-like protein [Leishmania major strain
Friedlin]
Length = 245
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S N++V+ L D+ L+D FS +G +V A+I++ ++S SKG+GFV + + +A KAI
Sbjct: 19 SRNVYVASLPLSFDDQQLQDLFSPYGRIVSARIMRAKKSHASKGYGFVMFREVSSAEKAI 78
Query: 97 EGMDGKFLDGWVIFVEYAK 115
EG+ G+ +DG I V A
Sbjct: 79 EGLHGRVVDGSRIQVRRAN 97
>gi|48734702|gb|AAH71591.1| PABPC4 protein [Homo sapiens]
Length = 660
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|340502094|gb|EGR28811.1| splicing factor subunit 4, putative [Ichthyophthirius multifiliis]
Length = 267
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
E N+F+ L + T++ L DTFS FG ++ +IV+ ++ SKG+ FV Y EAA
Sbjct: 96 EVGANIFIGNLDQSITEQQLHDTFSQFGLIISRRIVRDPDNDESKGYAFVSYDNFEAADA 155
Query: 95 AIEGMDGKFLDGWVIFVEYA 114
AI M+G+F I V+YA
Sbjct: 156 AINTMNGQFFGSKKINVQYA 175
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P ++V G+ ++ T E L + FS G VV+ + K + +G +G+GFV++ + E A +
Sbjct: 10 PDATIYVGGIDQKVTQEVLWELFSQCGIVVNVHLPKDKITGEHQGYGFVEFKSEEDADYS 69
Query: 96 IEGM 99
I+ M
Sbjct: 70 IKIM 73
>gi|302762759|ref|XP_002964801.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
gi|300167034|gb|EFJ33639.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
Length = 127
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Query: 30 QRPQAE--PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYA 87
RP+A + L+V+GL+ D +LR F FG+V+ K++ + ++G SKGFGFV +
Sbjct: 10 NRPKARYMRACKLYVNGLAWGVDDLSLRGAFEEFGDVIDTKVMTNPDTGRSKGFGFVTFK 69
Query: 88 TLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
+ A +A+E MDGK G I V+YAK ++
Sbjct: 70 REDEAKEALESMDGKDFAGRSIRVDYAKTQK 100
>gi|261205092|ref|XP_002627283.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
gi|239592342|gb|EEQ74923.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
Length = 143
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV GL+ TTDETLR F +G + A +VK R++ S+GFGFV++A+ A A+ M
Sbjct: 4 LFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMNAM 63
Query: 100 DGKFLDGWVIFVEYAKPRQPPTLPSQNNTNF----QYGR 134
+ + DG VI V+ A R +Q N F QY R
Sbjct: 64 NNQEFDGRVIRVDKASDR-----STQRNDGFHGRGQYNR 97
>gi|119627673|gb|EAX07268.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_h [Homo sapiens]
Length = 661
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|367038789|ref|XP_003649775.1| hypothetical protein THITE_2108702 [Thielavia terrestris NRRL 8126]
gi|346997036|gb|AEO63439.1| hypothetical protein THITE_2108702 [Thielavia terrestris NRRL 8126]
Length = 325
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P +NLFV+G+ R + + F +GEV +I++ SG S+GFGFVK T E A A
Sbjct: 69 PGSNLFVTGIHPRIEESEITRLFEKYGEVEKCQIMRDPHSGESRGFGFVKMMTSEQADAA 128
Query: 96 IEGMDGKFLDGWVIFVEYAKPRQPPT 121
+EG+ G+ ++G + +E A+ +P T
Sbjct: 129 MEGLRGEIIEGRTLNIEKARRSRPRT 154
>gi|339501141|ref|YP_004699176.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
gi|338835490|gb|AEJ20668.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
Length = 116
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L+V LS T++++LR+ FS FG V AKI+ RE+G SKGFGFV+ +T E A AI G
Sbjct: 26 LYVGNLSYNTSEDSLRNLFSNFGSVASAKIIFDRETGNSKGFGFVEMSTDEEASAAIAGT 85
Query: 100 DGKFLDGWVIFVEYA--KPRQ 118
+G+ +G + V A KPR+
Sbjct: 86 NGREFEGRQLRVNEAMDKPRR 106
>gi|291227649|ref|XP_002733794.1| PREDICTED: polyadenylate-binding protein 1-like [Saccoglossus
kowalevskii]
Length = 655
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG+++ K+V E+G SKG+GFV +AT EAA K+IE
Sbjct: 100 NVFIKNLDKSIDNKAMYDTFSAFGDILSCKVVCD-ENG-SKGYGFVHFATEEAANKSIEK 157
Query: 99 MDGKFLDGWVIFV 111
++G L+G ++V
Sbjct: 158 VNGMLLNGKKVYV 170
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 295 VNLYVKNLDDSLDDERLRKEFMPFGTITSAKVMS--EGGRSKGFGFVCFSSPEEATKAVT 352
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 353 EMNGRIVSTKPLYVALAQRKE 373
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+FV DE LR+ F +G++V K+++ SG +KGFGFV + A A +
Sbjct: 191 TNVFVKNFGDELDDEGLREMFERYGKIVSHKVMQDDHSGRNKGFGFVCFEDPIDAENACD 250
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
++ K ++G +++V A+ +
Sbjct: 251 DLNMKDINGRILYVGRAQKK 270
>gi|50305507|ref|XP_452713.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641846|emb|CAH01564.1| KLLA0C11495p [Kluyveromyces lactis]
Length = 445
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
+EPS LF+ LS + L + F +GE+V +I H E+ KGFG+V+Y ++E A
Sbjct: 293 SEPSDTLFLGNLSFEADRDNLYEIFGKYGEIVSVRIPTHPETEQPKGFGYVQYGSIEDAT 352
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPRQ 118
KA EG+ G++++ + ++Y+ P+Q
Sbjct: 353 KAFEGLQGEYINNRPVRLDYSIPKQ 377
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 23 SSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFG 82
S S P EP+T +FV LS DE L+ F G V+ A+++ R + S+G+G
Sbjct: 182 SESKKPKTELAGEPAT-IFVGRLSWSIDDEWLKTEFEPIGGVISARVMYERGTDRSRGYG 240
Query: 83 FVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
+V + A KAI+ M GK +DG I + +
Sbjct: 241 YVDFEDKSYAEKAIKEMHGKEIDGRPINCDMS 272
>gi|255652857|ref|NP_001157308.1| poly(A) binding protein, cytoplasmic 3 [Mus musculus]
gi|12855391|dbj|BAB30319.1| unnamed protein product [Mus musculus]
gi|26325704|dbj|BAC26606.1| unnamed protein product [Mus musculus]
Length = 643
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+FV L + +TL DTFSAFG ++ K+V E+G SKG+GFV + T E A +AIE
Sbjct: 100 NIFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEEAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G FL+ +FV K R+
Sbjct: 158 MNGMFLNDHKVFVGRFKSRR 177
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ L + DE L+D F FG + K++ ESG SKGFGFV + E A KA+E
Sbjct: 191 TNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTD-ESGKSKGFGFVSFERHEDARKAVE 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 250 EMNGKDLNGKQIYVGRAQKK 269
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK+ E G SKGFGFV +++ E A KA+
Sbjct: 304 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVTM--EGGRSKGFGFVCFSSPEEATKAVT 361
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+GK + ++V A+ ++
Sbjct: 362 EMNGKIVATKPLYVALAQRKE 382
>gi|410263250|gb|JAA19591.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 644
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|357127016|ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 109
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 18 STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
ST P + LN + + LFV GLS T + L+D FS G V K++ H +G
Sbjct: 12 STIPLRNLLN--RSANFSSCSKLFVGGLSYDTNEIALKDAFSQHGTVTEVKVICHPVTGR 69
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKP 116
SKG+GFVK+++ A A+E M + LDG I V YA
Sbjct: 70 SKGYGFVKFSSESEAAAALEKMSNELLDGRNIRVHYANS 108
>gi|189467129|ref|ZP_03015914.1| hypothetical protein BACINT_03513 [Bacteroides intestinalis DSM
17393]
gi|224535639|ref|ZP_03676178.1| hypothetical protein BACCELL_00503 [Bacteroides cellulosilyticus
DSM 14838]
gi|423222774|ref|ZP_17209244.1| hypothetical protein HMPREF1062_01430 [Bacteroides cellulosilyticus
CL02T12C19]
gi|189435393|gb|EDV04378.1| hypothetical protein BACINT_03513 [Bacteroides intestinalis DSM
17393]
gi|224522743|gb|EEF91848.1| hypothetical protein BACCELL_00503 [Bacteroides cellulosilyticus
DSM 14838]
gi|392641138|gb|EIY34924.1| hypothetical protein HMPREF1062_01430 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 94
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+++SGLS D L + FSA+GE AK++ RESG S+GFGFV+ + KAI
Sbjct: 2 NIYISGLSYGINDADLNELFSAYGETSSAKVIMDRESGRSRGFGFVEMTSDTDGQKAINE 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G D I V A+PR+
Sbjct: 62 LNGAEYDQKTISVSVARPRE 81
>gi|148670144|gb|EDL02091.1| RIKEN cDNA 4932702K14 [Mus musculus]
Length = 642
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+FV L + +TL DTFSAFG ++ K+V E+G SKG+GFV + T E A +AIE
Sbjct: 100 NIFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEEAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G FL+ +FV K R+
Sbjct: 158 MNGMFLNDHKVFVGRFKSRR 177
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ L + DE L+D F FG + K++ ESG SKGFGFV + E A KA+E
Sbjct: 191 TNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTD-ESGKSKGFGFVSFERHEDARKAVE 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 250 EMNGKDLNGKQIYVGRAQKK 269
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK+ E G SKGFGFV +++ E A KA+
Sbjct: 304 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVTM--EGGRSKGFGFVCFSSPEEATKAVT 361
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+GK + ++V A+ ++
Sbjct: 362 EMNGKIVATKPLYVALAQRKE 382
>gi|119195917|ref|XP_001248562.1| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
gi|392862234|gb|EAS37139.2| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
Length = 496
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+NLFV LS +E LR F +FGE+ +IV R+SG S+GFG+V++ E A KA
Sbjct: 261 SSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDASKAF 320
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+ +DG I +++A RQ
Sbjct: 321 KAKKDAEIDGRTINLDFANARQ 342
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 48/82 (58%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S LF+ +S + +++TFS+ G ++ ++ ESG KGFG+V++++++ A A
Sbjct: 366 SDTLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRPKGFGYVQFSSVDEARSAF 425
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+ G L G + ++++ PRQ
Sbjct: 426 NALQGTELAGRAMRLDFSTPRQ 447
>gi|119625554|gb|EAX05149.1| hCG1647909 [Homo sapiens]
Length = 369
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R +A TN+++ DE L+D FS +G+ + K++ SG SKGFGFV + + E
Sbjct: 183 RSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHE 241
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
AA KA+E M+G+ ++G +IFV A+ +
Sbjct: 242 AAKKAVEEMNGRDINGQLIFVGRAQKK 268
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++TL + FSAFG+++ +K++ + SKG+ FV + AA +AIE
Sbjct: 99 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEE 156
Query: 99 MDGKFLDGWVIFVEYAKPRQP 119
M+GK L G +FV K R+
Sbjct: 157 MNGKLLKGCKVFVGRFKNRKD 177
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R + L++ L DE LR+ FS+FG + K+++ E G SKGFG + +++
Sbjct: 285 ERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQ--EEGQSKGFGLICFSSP 342
Query: 90 EAAGKAIEGMDGKFL 104
E A KA+ M+G+ L
Sbjct: 343 EDATKAMTEMNGRIL 357
>gi|304376936|gb|ACI70007.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 82
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LFV GLS TT+E+L + F+ +G + +++ +E+G S+GFGFVKY E A A++GM
Sbjct: 7 LFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDGM 66
Query: 100 DGKFLDGWVIFV 111
+GK +D +IFV
Sbjct: 67 NGKSVD-LMIFV 77
>gi|359479548|ref|XP_003632289.1| PREDICTED: cold-inducible RNA-binding protein-like [Vitis vinifera]
gi|296084877|emb|CBI28286.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
++ LFV G+S TT++TL + FS FGEVV AKI+ + KGF +V + + A KA+
Sbjct: 33 ASTLFVKGISFSTTEKTLAEAFSQFGEVVEAKIIMDKRKLRPKGFAYVTFTREDEAEKAL 92
Query: 97 EGMDGKFLDGWVIFVEYA 114
M+GK +DG + V+YA
Sbjct: 93 TEMNGKVVDGRTVLVDYA 110
>gi|299530322|ref|ZP_07043747.1| RNA-binding region RNP-1 [Comamonas testosteroni S44]
gi|298721693|gb|EFI62625.1| RNA-binding region RNP-1 [Comamonas testosteroni S44]
Length = 113
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST ++V L TD LR F+ FG V AK++ RE+G SKGF FV+ + + AI
Sbjct: 2 STKIYVGNLPYSVTDSNLRSNFAEFGTVTSAKVMMDRETGRSKGFAFVEMTSADECQAAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+ G +DG I V AKPR+
Sbjct: 62 SALHGMSVDGRSIVVNLAKPRE 83
>gi|303321732|ref|XP_003070860.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110557|gb|EER28715.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040347|gb|EFW22280.1| hypothetical protein CPSG_00179 [Coccidioides posadasii str.
Silveira]
Length = 498
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+NLFV LS +E LR F +FGE+ +IV R+SG S+GFG+V++ E A KA
Sbjct: 263 SSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDASKAF 322
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+ +DG I +++A RQ
Sbjct: 323 KAKKDAEIDGRTINLDFANARQ 344
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 48/82 (58%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S LF+ +S + +++TFS+ G ++ ++ ESG KGFG+V++++++ A A
Sbjct: 368 SDTLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRPKGFGYVQFSSVDEARSAF 427
Query: 97 EGMDGKFLDGWVIFVEYAKPRQ 118
+ G L G + ++++ PRQ
Sbjct: 428 NALQGTELAGRAMRLDFSTPRQ 449
>gi|241752336|ref|XP_002401050.1| RNA-binding protein precursor, putative [Ixodes scapularis]
gi|215508305|gb|EEC17759.1| RNA-binding protein precursor, putative [Ixodes scapularis]
Length = 195
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL ++ L + TDE R F++ G + +KIV+H+ +GYS GFGFV Y ++E A +A+
Sbjct: 10 TNLIINYLPQTLTDEEFRSLFTSIGPIKSSKIVRHKATGYSYGFGFVDYQSIEDAARAVG 69
Query: 98 GMDGKFLDGWVIFVEYAKP 116
++G L I V YA+P
Sbjct: 70 TLNGLQLQNKKIKVAYARP 88
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 22/109 (20%)
Query: 31 RPQAE--PSTNLFVSGLSKRTTDETLRDTFSAFGEVVH--------------------AK 68
RP E NL++ G+ K E F+ FG ++
Sbjct: 87 RPGGETIKHANLYIRGIPKHYPPEQAEKLFADFGRLIQFRVLKDDSGSGNKGYGSVTKVN 146
Query: 69 IVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
I++ +G SKGFGFV A + AIE ++G G + V + +P+
Sbjct: 147 IIRDTSTGLSKGFGFVTMANYQDCVWAIEALNGFRYAGRPLQVSFKQPK 195
>gi|259515737|sp|P0CB38.1|PAB4L_HUMAN RecName: Full=Polyadenylate-binding protein 4-like;
Short=PABP-4-like; Short=Poly(A)-binding protein 4-like
Length = 370
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R +A TN+++ DE L+D FS +G+ + K++ SG SKGFGFV + + E
Sbjct: 183 RSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHE 241
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
AA KA+E M+G+ ++G +IFV A+ +
Sbjct: 242 AAKKAVEEMNGRDINGQLIFVGRAQKK 268
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++TL + FSAFG+++ +K++ + SKG+ FV + AA +AIE
Sbjct: 99 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEE 156
Query: 99 MDGKFLDGWVIFVEYAKPRQP 119
M+GK L G +FV K R+
Sbjct: 157 MNGKLLKGCKVFVGRFKNRKD 177
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R + L++ L DE LR+ FS+FG + K+++ E G SKGFG + +++
Sbjct: 285 ERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQ--EEGQSKGFGLICFSSP 342
Query: 90 EAAGKAIEGMDGKFL 104
E A KA+ M+G+ L
Sbjct: 343 EDATKAMTEMNGRIL 357
>gi|4504715|ref|NP_003810.1| polyadenylate-binding protein 4 isoform 2 [Homo sapiens]
gi|332808510|ref|XP_003308042.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730716|ref|XP_003775777.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pongo abelii]
gi|397488844|ref|XP_003815453.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pan paniscus]
gi|426329066|ref|XP_004025565.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Gorilla
gorilla gorilla]
gi|12229875|sp|Q13310.1|PABP4_HUMAN RecName: Full=Polyadenylate-binding protein 4; Short=PABP-4;
Short=Poly(A)-binding protein 4; AltName:
Full=Activated-platelet protein 1; Short=APP-1; AltName:
Full=Inducible poly(A)-binding protein; Short=iPABP
gi|1163177|gb|AAC50350.1| inducible poly(A)-binding protein [Homo sapiens]
gi|2801403|gb|AAB97309.1| polyadenylate binding protein [Homo sapiens]
gi|119627669|gb|EAX07264.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_d [Homo sapiens]
gi|410227600|gb|JAA11019.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|1585757|prf||2201474A inducible poly(A)-binding protein
Length = 644
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|391344304|ref|XP_003746441.1| PREDICTED: ELAV-like protein 4-like [Metaseiulus occidentalis]
Length = 394
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
+ TNL V+ L + T E +R FS+ GEV K+++ + +G S G+GFV Y EAA K
Sbjct: 64 DSKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTGQSLGYGFVNYVCAEAAEK 123
Query: 95 AIEGMDGKFLDGWVIFVEYAKP 116
AI ++G L I V YA+P
Sbjct: 124 AINTLNGLRLQNKTIKVSYARP 145
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 31 RPQAEP--STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIV-KHRESGYSKGFGFVKYA 87
RP +E NL+VSGL K T + L F+ +G ++ ++I+ + +G SKG GFV++
Sbjct: 144 RPSSEAIKGANLYVSGLPKSMTQQDLEQLFAPYGGIITSRILCDNITAGLSKGVGFVRFD 203
Query: 88 TLEAAGKAIEGMDGKFLDG 106
A +AI+ + +G
Sbjct: 204 QRVEAERAIKHLHNTIPEG 222
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
+FV L+ T + L F FG V K+++ ++ KGFGFV + A AI+ +
Sbjct: 314 IFVYNLAPDTEENLLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQTL 373
Query: 100 DGKFLDGWVIFVEY 113
+G L V+ V +
Sbjct: 374 NGYTLGNRVLQVSF 387
>gi|145219698|ref|YP_001130407.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
gi|145205862|gb|ABP36905.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
Length = 90
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V L +++ LRD FS FG+V A I+ + SG SKGFGFV+ + +AA +AIE
Sbjct: 2 NIYVGNLPYTVSEDDLRDAFSEFGQVESANIIMDKFSGRSKGFGFVEMSDDDAAREAIEA 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M K G I V AKPR+
Sbjct: 62 MHNKDFMGRSIMVNEAKPRE 81
>gi|403292060|ref|XP_003937075.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 643
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|119627667|gb|EAX07262.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_b [Homo sapiens]
Length = 645
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE+L++ FS FG+ + K+++ +G SKGFGFV Y E A
Sbjct: 186 KAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA+E M+GK + G +IFV A+ +
Sbjct: 245 NKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+ FV + T EAA KAIE
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL++ L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVGSKPLYVALAQRKE 372
>gi|325181594|emb|CCA16044.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325191994|emb|CCA26461.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 236
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 12 GLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVK 71
G RR STSP S+ + A P NL+V+ L+ R TDE LR F FG + +I+
Sbjct: 50 GERR--STSPSSNQMASEHGDIANPGNNLYVANLAHRVTDEELRQLFEKFGRLEKCEIII 107
Query: 72 HRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAK 115
S S+GF FV + + A A++ ++GK + G + VE+AK
Sbjct: 108 DPISRESRGFAFVTFEDVRDASDAVQELNGKDIQGRRMRVEHAK 151
>gi|426345476|ref|XP_004040437.1| PREDICTED: polyadenylate-binding protein 4-like [Gorilla gorilla
gorilla]
Length = 428
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R +A TN+++ DE L+D FS +G+ + K++ SG SKGFGFV + + E
Sbjct: 241 RSKASEFTNIYIKNFGGEMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHE 299
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
AA KA+E M+G+ ++G +IFV A+ +
Sbjct: 300 AAKKAVEEMNGRDINGQLIFVGRAQKK 326
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++TL + FSAFG+++ +K++ + SKG+ FV + AA +AIE
Sbjct: 157 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEE 214
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+GK L G +FV K R+
Sbjct: 215 MNGKLLKGCKVFVGRFKNRK 234
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R + L++ L DE LR+ FS+FG + K+++ E G SKGFG + +++
Sbjct: 343 ERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQ--EEGQSKGFGLICFSSP 400
Query: 90 EAAGKAIEGMDGKFL 104
E A KA+ M+G+ L
Sbjct: 401 EDATKAMTEMNGRIL 415
>gi|212722336|ref|NP_001132163.1| uncharacterized protein LOC100193584 [Zea mays]
gi|194693616|gb|ACF80892.1| unknown [Zea mays]
Length = 234
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 51/72 (70%)
Query: 44 GLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKF 103
GL+ T++E+L + F+++GE++ +K++ RE+G S+GFGFV +++ + AIE M+GK
Sbjct: 89 GLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKE 148
Query: 104 LDGWVIFVEYAK 115
LDG I V A+
Sbjct: 149 LDGRNITVNQAQ 160
>gi|225442420|ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Vitis vinifera]
Length = 630
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
E ++NL+V L D+ L++ FS+ G++ AK+++H +SG SKGFGFV ++T E A K
Sbjct: 306 EKASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRH-DSGLSKGFGFVCFSTSEEAQK 364
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQ 118
A+ ++G L G +++ A+ ++
Sbjct: 365 ALTTLNGTLLHGRSLYIAMAQRKE 388
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 14 RRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHR 73
++LF S F + + TN++V L + T++ +RD FS FG+V I+K
Sbjct: 184 KKLF-VSKFVKKCERKEASEETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDG 242
Query: 74 ESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
+G S+GFGFV + + + A KA+E ++G L +FV A+ +
Sbjct: 243 -NGKSRGFGFVNFESPDEAKKAVEALNGAMLGSKKLFVGRAQKK 285
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NLFV L +L+D F FG ++ K+ + E+G SK FGFV++ + ++A A+
Sbjct: 118 NLFVKNLDPSINSASLQDIFCKFGNILSCKVAE--ENGKSKCFGFVQFDSDDSATAALNA 175
Query: 99 MDGKFLDGWVIFV 111
++ LDG +FV
Sbjct: 176 LNDTMLDGKKLFV 188
>gi|162463757|ref|NP_001105347.1| nucleic acid binding protein1 [Zea mays]
gi|168526|gb|AAA33486.1| nucleic acid-binding protein [Zea mays]
gi|195637380|gb|ACG38158.1| ribonucleoprotein [Zea mays]
gi|219884029|gb|ACL52389.1| unknown [Zea mays]
gi|414884557|tpg|DAA60571.1| TPA: nucleic acid binding protein1 [Zea mays]
Length = 303
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 12/110 (10%)
Query: 8 AAPRGLRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHA 67
AAPRG R ++ P R Q+ PS ++V L + D L + FS G+VV A
Sbjct: 201 AAPRGSR-----------VDRPPR-QSGPSLRIYVGNLPWQVDDSRLVELFSEHGKVVDA 248
Query: 68 KIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
++V RE+G S+GFGFV A+ + AI +DG+ LDG + V A+ R
Sbjct: 249 RVVYDRETGRSRGFGFVTMASQDELDDAIAALDGQSLDGRALRVNVAEER 298
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
++V L E L F G V A+++ +RE+ S+GFGFV +T+E A KA+E
Sbjct: 127 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVEMF 186
Query: 100 DGKFLDGWVIFVEYAKPR 117
++G ++ V A PR
Sbjct: 187 HRYDVNGRLLTVNKAAPR 204
>gi|340719920|ref|XP_003398392.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
terrestris]
Length = 609
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + ESG SKG+GFV + T EAA K+I+
Sbjct: 100 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQD-ESGVSKGYGFVHFETEEAANKSIDR 158
Query: 99 MDGKFLDGWVIF 110
++G L+G +F
Sbjct: 159 VNGMLLNGKKLF 170
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV ++ E A KA+
Sbjct: 275 VNLYVKNLDDSIDDERLRKEFAPFGTITSAKVM--MEEGRSKGFGFVCFSAPEEATKAVT 332
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 333 EMNGRIIVTKPLYVALAQRKE 353
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + TD+ L++ F +G + K++ ++ G S+GFGFV + +AA +A+
Sbjct: 171 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVM-IKDDGKSRGFGFVAFEDPDAAEQAVL 229
Query: 98 GMDGKFL-DGWVIFVEYAKPR 117
++GK + +G ++V A+ +
Sbjct: 230 ELNGKEVAEGKCMYVGRAQKK 250
>gi|193215305|ref|YP_001996504.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
gi|193088782|gb|ACF14057.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
Length = 104
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V LS T+ LRD FS +GEV A I+ + SG S+GFGFV A +AIE
Sbjct: 2 NIYVGNLSYTLTENELRDVFSEYGEVASANIIVDKYSGKSRGFGFVDMPNEADAEQAIEA 61
Query: 99 MDGKFLDGWVIFVEYAKPR 117
++G LDG + V A+PR
Sbjct: 62 LNGSQLDGRSLKVNEARPR 80
>gi|157818977|ref|NP_001099678.1| poly(A) binding protein, cytoplasmic 6 [Rattus norvegicus]
gi|149027506|gb|EDL83096.1| similar to RIKEN cDNA 4932702K14 (predicted) [Rattus norvegicus]
gi|197246058|gb|AAI68959.1| Poly(A) binding protein, cytoplasmic 3 [Rattus norvegicus]
Length = 643
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+FV L + +TL DTFSAFG ++ K+V E+G SKG+GFV + T E A +AIE
Sbjct: 100 NIFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEEAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G FL+ +FV K R+
Sbjct: 158 MNGMFLNDRKVFVGRFKSRR 177
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ L + DE L+D FS FG + K++ ESG SKGFGFV + E A
Sbjct: 186 RAKEFTNVYIKNLGEDMDDERLQDLFSRFGPALSVKVMTD-ESGKSKGFGFVSFERHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA++ M+GK L+G I+V A+ +
Sbjct: 245 RKAVDEMNGKDLNGKQIYVGRAQKK 269
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NL+V L DE LR FS FG + AK+ E G SKGFGFV +++ E A KA+
Sbjct: 305 NLYVKNLDDGIDDERLRKEFSPFGTITSAKVTM--EGGRSKGFGFVCFSSPEEATKAVTE 362
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 363 MNGRIVATKPLYVALAQRKE 382
>gi|358367775|dbj|GAA84393.1| glycine-rich RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 117
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ LF+ GL+ TTD+TLR+ FS +G + A +VK ++ S+GFGFV++A+ A A+
Sbjct: 2 SKLFIGGLAWHTTDDTLREGFSQYGTIEEAIVVKDHDTHRSRGFGFVRFASDAEADAAMN 61
Query: 98 GMDGKFLDGWVIFVEYAKPRQP 119
M+ + DG VI V+ A +P
Sbjct: 62 AMNNQEFDGRVIRVDKASESRP 83
>gi|449543395|gb|EMD34371.1| hypothetical protein CERSUDRAFT_140831 [Ceriporiopsis subvermispora
B]
Length = 323
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEV-VHAKIVKHRESGYSKGFGFVKYATL 89
+ Q + NLF+ L + + L DTFSAFG + AKI + +G SKG+GFV Y
Sbjct: 92 KKQLDVGANLFIGNLDENVDERLLYDTFSAFGVMATTAKIARDPSTGKSKGYGFVSYTDF 151
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
E++ A+E M+G+FL I V+YA
Sbjct: 152 ESSDAAVESMNGQFLMNKAITVQYA 176
>gi|422295420|gb|EKU22719.1| splicing factor 3B subunit 4 [Nannochloropsis gaditana CCMP526]
Length = 274
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYAT 88
R + NLF+ L+ ++ L DTFSAFG + K++ ++G++KGFGFV + +
Sbjct: 92 DRKTVDVGANLFIGNLAAEVDEKDLYDTFSAFGGITQPPKVMFDPDTGHTKGFGFVSFDS 151
Query: 89 LEAAGKAIEGMDGKFLDGWVIFVEYA 114
EAA AIE M+G +L G I V+YA
Sbjct: 152 FEAADYAIECMNGAYLGGRPICVQYA 177
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
Q ++ GL ++ T++ L + G VVH + + + +G + FGFV++ + E A
Sbjct: 8 QRNQDATVYCGGLDEKVTEDLLWELMQNVGPVVHVHMPRDKVTGMHQCFGFVEFRSEEDA 67
Query: 93 GKAIEGMD 100
A++ M+
Sbjct: 68 DYAVKIMN 75
>gi|452821825|gb|EME28851.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 149
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A +FV GL ++ LR+TFS +GEVV A++V RE+G S+GFGFV YA +
Sbjct: 3 AVEDNRVFVGGLPWSVGEDDLRETFSKYGEVVDARVVVERETGRSRGFGFVSYAEGSSVE 62
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPRQ 118
+ I +DG+ + G I V A R+
Sbjct: 63 ECIAALDGQDMQGRTIRVNKAMSRE 87
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ FS +G + +++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G ++V A+ +
Sbjct: 250 EMNGKELNGRQVYVGRAQKK 269
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|432907583|ref|XP_004077665.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 635
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ F +G + +++ ++G SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDEKLKELFGNYGPALSVRVMTD-DTGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G ++V A+ +
Sbjct: 250 DMNGKELNGRQVYVGRAQKK 269
>gi|322798581|gb|EFZ20185.1| hypothetical protein SINV_01390 [Solenopsis invicta]
Length = 523
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q Q E TNL V+ L + T + +R FS+ GEV K+++ + SG S G+GFV Y
Sbjct: 19 QTSQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRP 78
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKP 116
E A KAI ++G L I V YA+P
Sbjct: 79 EDAEKAINTLNGLRLQNKTIKVSYARP 105
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 31 RPQAEP--STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYAT 88
RP +E NL+VSGL K + L + FS +G ++ ++I+ +G SKG GF+++
Sbjct: 104 RPSSEAIKGANLYVSGLPKNMAQQDLENLFSPYGRIITSRILCDNITGLSKGVGFIRFDQ 163
Query: 89 LEAAGKAIEGMDGKFLDGWV--IFVEYAKPRQPPTLPSQNN 127
A +AI+ ++G G I V++A PS NN
Sbjct: 164 RVEAERAIQELNGTIPKGSSEPITVKFANN------PSNNN 198
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
+FV L+ T + L F FG V K+++ ++ KGFGFV E A AI+ +
Sbjct: 254 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 313
Query: 100 DGKFLDGWVI 109
+G L V+
Sbjct: 314 NGYTLGNRVL 323
>gi|345870896|ref|ZP_08822845.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921050|gb|EGV31774.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V LS TTD LR+ F+ FGEV ++ + +G SKGFGFV+ A AI+G
Sbjct: 2 NIYVGNLSYNTTDSDLREAFAPFGEVAQVNLISDKFTGQSKGFGFVEMPNNSHADAAIKG 61
Query: 99 MDGKFLDGWVIFVEYAKPR 117
++G L G I V AKPR
Sbjct: 62 LNGTDLQGRSIKVNEAKPR 80
>gi|418530958|ref|ZP_13096878.1| RNA recognition motif-containing protein [Comamonas testosteroni
ATCC 11996]
gi|371452037|gb|EHN65069.1| RNA recognition motif-containing protein [Comamonas testosteroni
ATCC 11996]
Length = 83
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+NL+V+ LS + LR F + G+VV A I+ RE+G S+GFGFV+ T E A KAIE
Sbjct: 3 SNLYVTNLSYTVDSDALRAHFGSCGDVVAADIIMDRETGRSRGFGFVEMGTQEQAQKAIE 62
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
++ + L G + V A+PR+
Sbjct: 63 TLNDQPLGGRALGVALARPRK 83
>gi|357152395|ref|XP_003576105.1| PREDICTED: uncharacterized protein LOC100823193 [Brachypodium
distachyon]
Length = 267
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 23 SSSLNPP--QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKG 80
++S NP Q + S+ +FV GLS T + LR+ F+ +G+++ AKI+ ES S+G
Sbjct: 14 ATSSNPTLYQAIRCMSSSKIFVGGLSYNTDETGLREAFTHYGDIIDAKIIVDHESRRSRG 73
Query: 81 FGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
FGF+ YA + A AI +DGK L G I V A R
Sbjct: 74 FGFITYAAEDQAKAAIMALDGKELHGRNIRVSEANER 110
>gi|330920718|ref|XP_003299119.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
gi|311327336|gb|EFQ92795.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
Length = 171
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ LF+ GL+ T D+ LR F FG+V A +VK R++G S+GFGFV+YA A A++
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQ 61
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+ + DG I V+ A R
Sbjct: 62 AMNNEEFDGRRIRVDKASDR 81
>gi|189203945|ref|XP_001938308.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985407|gb|EDU50895.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 168
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ LF+ GL+ T D+ LR F FG+V A +VK R++G S+GFGFV+YA A A++
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQ 61
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+ + DG I V+ A R
Sbjct: 62 AMNNEEFDGRRIRVDKASDR 81
>gi|71896197|ref|NP_001026768.1| polyadenylate-binding protein 1 [Gallus gallus]
gi|53130422|emb|CAG31540.1| hypothetical protein RCJMB04_7l20 [Gallus gallus]
Length = 637
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ R
Sbjct: 250 EMNGKELNGKQIYVGRAQKR 269
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + D+ L+D FS +G + +++ E+G S+GFGFV + E A +A++
Sbjct: 191 TNVYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTD-ENGKSRGFGFVSFERHEDAQRAVD 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK ++G +I+V A+ +
Sbjct: 250 EMNGKEMNGKLIYVGRAQKK 269
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ + G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--DGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GLS TT+++L D FS +G + + + ++RE+ S+GFGFV + + A A+EGM
Sbjct: 7 LFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALEGM 66
Query: 100 DGKFLDGWVIFVEYA 114
+GK +DG I V+ A
Sbjct: 67 NGKSVDGRTIRVDEA 81
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GLS T +E+L F +G + +++ +E+G S+GFGFVKY + A A+EGM
Sbjct: 7 LFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDALEGM 66
Query: 100 DGKFLDGWVIFVEYA 114
+GK LDG I V+ A
Sbjct: 67 NGKTLDGRAIRVDEA 81
>gi|357111298|ref|XP_003557451.1| PREDICTED: uncharacterized protein LOC100823909 [Brachypodium
distachyon]
Length = 258
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
+FV GLS TT+ TL FS FG+V+ ++V R++G S+GFGFV ++ AA AI M
Sbjct: 9 IFVGGLSWDTTERTLERAFSDFGKVIETQVVTERDTGRSRGFGFVTFSEPRAADAAIREM 68
Query: 100 DGKFLDGWVIFVEYAKPR 117
LDG I V A+PR
Sbjct: 69 HNGELDGRTISVNKAQPR 86
>gi|410910966|ref|XP_003968961.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 635
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM--LEGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ +E LRD F+ +G + +++ +SG S+GFGFV + E A KA++
Sbjct: 191 TNVYIKNFGDDMDEEKLRDVFNKYGNAMSIRVMTD-DSGKSRGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK ++G I+V A+ +
Sbjct: 250 EMNGKEMNGKPIYVGRAQKK 269
>gi|390476078|ref|XP_002759394.2| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 633
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 291 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 348
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 349 EMNGRIVATKPLYVALAQRKE 369
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F G + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKDLF---GPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 246
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 247 EMNGKELNGKQIYVGRAQ 264
>gi|35570|emb|CAA68428.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 291 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 348
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 349 EMNGRIVATKPLYVALAQRKE 369
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F G + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKDLF---GPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 246
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 247 EMNGKELNGKQIYVGRAQ 264
>gi|406907930|gb|EKD48603.1| RNA-binding protein [uncultured bacterium]
Length = 100
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V L T+++LR+ F FG+V K+V + SG SKGF FV + E AIE
Sbjct: 2 NIYVGNLPYSITEDSLRELFEQFGDVSSTKVVVDQISGRSKGFAFVDMSNDEEGEAAIEK 61
Query: 99 MDGKFLDGWVIFVEYAKPRQP 119
++G LDG I V AKPR P
Sbjct: 62 LNGHELDGRTIVVNKAKPRAP 82
>gi|156088367|ref|XP_001611590.1| RNA recognition motif domain containing protein [Babesia bovis]
gi|154798844|gb|EDO08022.1| RNA recognition motif domain containing protein [Babesia bovis]
Length = 643
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
T + + LS TT+ET+R+ FS GEV+ I K E+G S G F+ + + EAA +A+E
Sbjct: 477 TEVCIRNLSYNTTEETMRELFSECGEVIRCVIPKFEENGKSMGRCFIGFTSEEAAARAVE 536
Query: 98 GMDGKFLDGWVIFVEYAKPRQP 119
D +DG + ++YA+PR P
Sbjct: 537 -YDNTEIDGRTVSIQYARPRTP 557
>gi|115686233|ref|XP_784135.2| PREDICTED: splicing factor 3B subunit 4-like [Strongylocentrotus
purpuratus]
Length = 425
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
N+F+ L ++ L DTFSAFG ++ KI++ ESG SKG+ F+ +A+ EAA AIE
Sbjct: 101 NIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDVESGNSKGYAFINFASFEAADAAIE 160
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G++L I + +A
Sbjct: 161 AMNGQYLCNRAITISFA 177
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 28 PPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYA 87
PPQ + ++V GL ++ T+ L + F G VV+ + K R + +G+GFV++
Sbjct: 5 PPQERNQD--ATVYVGGLDEKVTEALLWELFLQAGPVVNTHMPKDRVTQSHQGYGFVEFM 62
Query: 88 TLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
E A AI+ ++ L G + V A Q
Sbjct: 63 GEEDADYAIKVLNMIKLYGKPVRVNKASAHQ 93
>gi|431901758|gb|ELK08635.1| Polyadenylate-binding protein 1 [Pteropus alecto]
Length = 636
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 250 EMNGKELNGKQIYVGRAQ 267
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|351725469|ref|NP_001238373.1| glycine-rich RNA-binding protein [Glycine max]
gi|5726567|gb|AAD48471.1|AF169205_1 glycine-rich RNA-binding protein [Glycine max]
Length = 160
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
A+ FV GL+ T D L FS +GE+V KI+ RE+G S+GFGFV +A+ ++
Sbjct: 4 ADVEYRCFVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMK 63
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
AI M+G+ LDG I V A+
Sbjct: 64 DAIGAMNGQNLDGRNITVNEAQ 85
>gi|407033602|gb|EKE36900.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 136
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
T L++ L+ TDE+L+ F FG V K+V R+S SKGFGFV + E A KAIE
Sbjct: 2 TRLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIE 61
Query: 98 GMDGKFLDGWVIFVEYAKPRQP 119
M+ + L+G I V+ ++PR+
Sbjct: 62 EMNEQELEGRRIKVDVSRPREE 83
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
+EPS LF+ LS + + + FS FGE+V +I H E+ KGFG+V+Y ++ A
Sbjct: 284 SEPSETLFLGNLSFNADRDNIYEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYGNVDDAK 343
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPR 117
KA++ + G+++D + ++Y+ PR
Sbjct: 344 KALDALQGEYIDNRPVRLDYSTPR 367
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
EP+T +FV LS DE L++ F G VV A+++ R + S+G+G+V + A
Sbjct: 184 GEPAT-IFVGRLSWSIDDEWLKNEFDHIGGVVSARVIYERGTDRSRGYGYVDFEDKSYAE 242
Query: 94 KAIEGMDGKFLDGWVIFVEYA 114
KA++ M GK +DG I + +
Sbjct: 243 KAVKEMHGKEIDGRPINCDLS 263
>gi|345493619|ref|XP_003427110.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Nasonia vitripennis]
Length = 383
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 50/90 (55%)
Query: 27 NPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKY 86
N Q Q E TNL V+ L + T E +R FS+ GEV K+++ + +G S G+GFV Y
Sbjct: 17 NLGQSSQEESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNY 76
Query: 87 ATLEAAGKAIEGMDGKFLDGWVIFVEYAKP 116
E A KAI ++G L I V YA+P
Sbjct: 77 HRPEDAEKAINTLNGLRLQNKTIKVSYARP 106
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 4 RAAVAAPRGLRRLFSTSPFSSSLNP----PQRPQAEPSTNLFVSGLSKRTTDETLRDTFS 59
+A +A +GL+R SP + L P +FV L+ T + L F
Sbjct: 265 KAMLAINKGLQRY---SPLAGDLLANSMLPGNAMNGSGWCIFVYNLAPETEENVLWQLFG 321
Query: 60 AFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEY 113
FG V K+++ ++ KGFGFV E A AI+ ++G L V+ V +
Sbjct: 322 PFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSLNGYTLGNRVLQVSF 375
>gi|224046575|ref|XP_002200268.1| PREDICTED: polyadenylate-binding protein 1 [Taeniopygia guttata]
Length = 637
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 250 EMNGKELNGKQIYVGRAQKK 269
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|119612225|gb|EAW91819.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_e [Homo
sapiens]
Length = 633
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 291 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 348
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 349 EMNGRIVATKPLYVALAQRKE 369
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F G + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKDLF---GPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 246
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 247 EMNGKELNGKQIYVGRAQ 264
>gi|72534835|ref|NP_001026846.1| poly A binding protein, cytoplasmic 1 a [Danio rerio]
gi|71534060|gb|AAH99992.1| Poly A binding protein, cytoplasmic 1 a [Danio rerio]
Length = 634
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+G+ + ++V A+
Sbjct: 352 EMNGRIVATKPLYVALAQ 369
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ F +G + +++ +SG SKGFGFV + E A +A++
Sbjct: 191 TNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTD-DSGKSKGFGFVSFERHEDAQRAVD 249
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK ++G ++V A+
Sbjct: 250 EMNGKEMNGKQVYVGRAQ 267
>gi|255565709|ref|XP_002523844.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
gi|223536932|gb|EEF38570.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
Length = 121
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S+ LFV G+S +T E+L + FS FGE+V I+K + KG+ +V +AT A KA+
Sbjct: 33 SSRLFVKGISFSSTTESLTEAFSKFGEIVEVNIIKDKAMDRPKGYAYVTFATENEAKKAL 92
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
M+GK +DG +FV+ R
Sbjct: 93 TEMNGKVIDGRPVFVDNVSSR 113
>gi|147769692|emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]
Length = 555
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
E ++NL+V L D+ L++ FS+ G++ AK+++H +SG SKGFGFV ++T E A K
Sbjct: 306 EKASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRH-DSGLSKGFGFVCFSTSEEAQK 364
Query: 95 AIEGMDGKFLDGWVIFVEYA-----KPRQPPTLPSQNNTN 129
A+ ++G L G +++ A + R P Q NTN
Sbjct: 365 ALTTLNGTLLHGRSLYIAMAQRKEDRQRIPMKQAQQGNTN 404
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 14 RRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHR 73
++LF S F + + TN++V L + T++ +RD FS FG+V I+K
Sbjct: 184 KKLF-VSKFVKKCERKEASEETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKD- 241
Query: 74 ESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
+G S+GFGFV + + + A KA+E ++G L +FV A+ +
Sbjct: 242 GNGKSRGFGFVNFESPDEAKKAVEALNGAMLGSKKLFVGRAQKK 285
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 32 PQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEA 91
P+ NLFV L +L+D F FG ++ K+ + E+G SK FGFV++ + ++
Sbjct: 111 PRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAE--ENGKSKCFGFVQFDSDDS 168
Query: 92 AGKAIEGMDGKFLDGWVIFV 111
A A+ ++ LDG +FV
Sbjct: 169 ATAALNALNDTMLDGKKLFV 188
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 250 EMNGKELNGKQIYVGRAQ 267
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
NLF+ LS +E L F FGE+ +I+ R+SG SKGFG+V++ E A KA+E
Sbjct: 246 NLFIGNLSWNVDEEWLTREFEEFGELKGVRIITDRDSGRSKGFGYVEFENAEDAAKALEA 305
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
+G LD I ++++ PRQ
Sbjct: 306 KNGAELDNRAIRLDFSVPRQ 325
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
+EPS LFV LS T++ +R+ F G + ++ RESG KGFG+V+ +++ A
Sbjct: 347 SEPSQTLFVGNLSFDATEDMVREYFEEHGSINGIRLPTDRESGAPKGFGYVEMGSIDEAK 406
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPRQP 119
A E + G L G + ++Y+ PR P
Sbjct: 407 AAYEALQGADLGGRPMRLDYSTPRPP 432
>gi|451853629|gb|EMD66922.1| hypothetical protein COCSADRAFT_168179 [Cochliobolus sativus
ND90Pr]
Length = 159
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GL+ T D+TLR F FG V A +VK R++G S+GFGFV+YA A A++ M
Sbjct: 4 LFIGGLAWHTDDQTLRSKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYAQETEADAAMQAM 63
Query: 100 DGKFLDGWVIFVEYAKPR 117
+ + DG I V+ A R
Sbjct: 64 NNEEFDGRRIRVDKASDR 81
>gi|31560656|ref|NP_032800.2| polyadenylate-binding protein 1 [Mus musculus]
gi|341941223|sp|P29341.2|PABP1_MOUSE RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|13278026|gb|AAH03870.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|15029950|gb|AAH11207.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|18606321|gb|AAH23145.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|26336853|dbj|BAC32110.1| unnamed protein product [Mus musculus]
gi|29145018|gb|AAH46233.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|74144576|dbj|BAE36120.1| unnamed protein product [Mus musculus]
gi|74145579|dbj|BAE36203.1| unnamed protein product [Mus musculus]
gi|74179929|dbj|BAE36522.1| unnamed protein product [Mus musculus]
gi|74198265|dbj|BAE35302.1| unnamed protein product [Mus musculus]
gi|74198320|dbj|BAE35327.1| unnamed protein product [Mus musculus]
gi|74214225|dbj|BAE40360.1| unnamed protein product [Mus musculus]
gi|74223327|dbj|BAE21553.1| unnamed protein product [Mus musculus]
gi|148676871|gb|EDL08818.1| poly A binding protein, cytoplasmic 1 [Mus musculus]
Length = 636
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 250 EMNGKELNGKQIYVGRAQ 267
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|260815191|ref|XP_002602357.1| hypothetical protein BRAFLDRAFT_234358 [Branchiostoma floridae]
gi|229287666|gb|EEN58369.1| hypothetical protein BRAFLDRAFT_234358 [Branchiostoma floridae]
Length = 620
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQR---PQAEPST------NLFVSGLSKRTTDETLRDTFSA 60
P R T F + P R Q +PS N+F+ L K ++ + DTFSA
Sbjct: 63 PADAERALDTMNFDTIKGKPMRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAIYDTFSA 122
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
FG ++ K+ + E+G SKGFGFV + T EAA +A+ ++G L+G ++V PR
Sbjct: 123 FGNILSCKVAQD-ETGSSKGFGFVHFETQEAADEAMAKVNGMMLNGKKVYVGRFVPR 178
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + D+ LRD F +G+VV AK++ + G+S+GFGFV Y ++AGKA E
Sbjct: 193 TNIYVKNFGDKWDDDKLRDFFEKYGKVVSAKVMTD-DMGHSRGFGFVSYEEPDSAGKACE 251
Query: 98 GM-DGKFLDGWVIFVEYAKPR 117
M D + DG I+V A+ +
Sbjct: 252 EMNDMEVDDGRRIYVGRAQKK 272
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R Q NL+V L +E LR FS FG + +K++ E+G SKGFGFV +++
Sbjct: 289 ERIQRYQGVNLYVKNLDSTIDEEILRKEFSQFGTITSSKVMT--ENGRSKGFGFVCFSSP 346
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
E A KA+ M+G+ + ++V A+ ++
Sbjct: 347 EEATKAVTEMNGRIVVSKPLYVALAQRKE 375
>gi|221066816|ref|ZP_03542921.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|220711839|gb|EED67207.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
Length = 83
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V+ L E LR FS GEV+ A ++ RE+G S+GFGFV+ +T E A KAI+
Sbjct: 3 NNLYVTNLGYSIDGEALRAHFSGCGEVISADVISDRETGRSRGFGFVEMSTPEQAQKAIQ 62
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
++ + L G + V A+PR+
Sbjct: 63 TLNDQPLGGRAVGVALARPRK 83
>gi|207080212|ref|NP_001128842.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|75070631|sp|Q5R8F7.1|PABP1_PONAB RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|55730462|emb|CAH91953.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 250 EMNGKELNGKQIYVGRAQ 267
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ FS +G + +++ + G SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTD-DGGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G ++V A+ +
Sbjct: 250 DMNGKELNGRQVYVGRAQKK 269
>gi|291388359|ref|XP_002710763.1| PREDICTED: poly A binding protein, cytoplasmic 4 [Oryctolagus
cuniculus]
Length = 636
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 250 EMNGKELNGKQIYVGRAQ 267
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 250 EMNGKELNGKQIYVGRAQ 267
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|348513241|ref|XP_003444151.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oreochromis niloticus]
Length = 637
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ DE LR+ FS +G + +++ E+G S+GFGFV + E A KA++
Sbjct: 191 TNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTD-ENGKSRGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK ++G +++V A+ +
Sbjct: 250 EMNGKEMNGKLMYVGRAQKK 269
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|348513239|ref|XP_003444150.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oreochromis niloticus]
Length = 634
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ DE LR+ FS +G + +++ E+G S+GFGFV + E A KA++
Sbjct: 191 TNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTD-ENGKSRGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK ++G +++V A+ +
Sbjct: 250 EMNGKEMNGKLMYVGRAQKK 269
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|193787802|dbj|BAG53005.1| unnamed protein product [Homo sapiens]
Length = 636
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGAALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 250 EMNGKELNGKQIYVGRAQKK 269
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGINDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|41386798|ref|NP_776993.1| polyadenylate-binding protein 1 [Bos taurus]
gi|46367787|ref|NP_002559.2| polyadenylate-binding protein 1 [Homo sapiens]
gi|383872540|ref|NP_001244826.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|73974130|ref|XP_856708.1| PREDICTED: polyadenylate-binding protein 1 isoform 6 [Canis lupus
familiaris]
gi|194036975|ref|XP_001927782.1| PREDICTED: polyadenylate-binding protein 1 [Sus scrofa]
gi|332213999|ref|XP_003256115.1| PREDICTED: polyadenylate-binding protein 1 [Nomascus leucogenys]
gi|344273312|ref|XP_003408467.1| PREDICTED: polyadenylate-binding protein 1-like [Loxodonta
africana]
gi|402878853|ref|XP_003903080.1| PREDICTED: polyadenylate-binding protein 1 [Papio anubis]
gi|3183544|sp|P11940.2|PABP1_HUMAN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|47117093|sp|P61286.1|PABP1_BOVIN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|1562511|gb|AAD08718.1| poly(A)-binding protein [Homo sapiens]
gi|8979741|emb|CAB96752.1| polyadenylate-binding protein 1 [Bos taurus]
gi|16358990|gb|AAH15958.1| PABPC1 protein [Homo sapiens]
gi|23270713|gb|AAH23520.1| Poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
gi|74268035|gb|AAI02366.1| Poly(A) binding protein, cytoplasmic 1 [Bos taurus]
gi|119612221|gb|EAW91815.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|119612223|gb|EAW91817.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|123993665|gb|ABM84434.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|123999981|gb|ABM87499.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|168278070|dbj|BAG11013.1| polyadenylate-binding protein 1 [synthetic construct]
gi|296480464|tpg|DAA22579.1| TPA: polyadenylate-binding protein 1 [Bos taurus]
gi|380811722|gb|AFE77736.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940022|gb|AFI33616.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940024|gb|AFI33617.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 636
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 250 EMNGKELNGKQIYVGRAQ 267
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|387017716|gb|AFJ50976.1| Polyadenylate-binding protein 1-like [Crotalus adamanteus]
Length = 636
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 250 EMNGKELNGKQIYVGRAQKK 269
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|255077948|ref|XP_002502554.1| predicted protein [Micromonas sp. RCC299]
gi|226517819|gb|ACO63812.1| predicted protein [Micromonas sp. RCC299]
Length = 325
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 13 LRRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVK 71
+ +LF P ++ + + NLFV L ++ L DTFSAFG V+ KI++
Sbjct: 94 MIKLFG-KPIRANKASVDKKSTDVGANLFVGNLDPDMDEKLLYDTFSAFGVVITTPKIMR 152
Query: 72 HRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
++G S+GFGFV Y + EA+ AIE M+G+FL I V YA
Sbjct: 153 DPDTGNSRGFGFVSYDSFEASDAAIEAMNGQFLCNRPISVTYA 195
>gi|453089427|gb|EMF17467.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 501
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%)
Query: 14 RRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHR 73
+R + P +S + NLF+ LS +E L F FGE+ +I+ R
Sbjct: 216 KRKADSEPEETSKKAKTESNPDAVANLFIGNLSWNVDEEWLTREFEEFGELAGVRIITDR 275
Query: 74 ESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTN 129
+SG SKGFG+V++ E A KA+E + LD I V+++ PR Q +N
Sbjct: 276 DSGRSKGFGYVEFTNAEDAAKALEAKNESLLDNRNIRVDFSTPRDKSNAGPQQRSN 331
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 11 RGLRRLFSTSPFSSSLNPPQRPQ----------AEPSTNLFVSGLSKRTTDETLRDTFSA 60
R +R FST S+ P QR EP+ ++ LS T++ +R+ F+
Sbjct: 309 RNIRVDFSTPRDKSNAGPQQRSNDRQQKFGDAPGEPTATIWCGNLSFDATEDVVREYFAE 368
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP 119
G V ++ R++G KGFG+V+ ++E A A + G+ + G + ++YA+PR P
Sbjct: 369 HGNVNSIRLPTDRDTGAPKGFGYVEMGSVEEAQAAFNALQGQDVGGRPVRLDYAQPRPP 427
>gi|403418256|emb|CCM04956.1| predicted protein [Fibroporia radiculosa]
Length = 336
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R + + +T LF+ GL+ T E++RD FS FG+VV A ++ RE+G SKGFGFV + +
Sbjct: 88 RQEHQRATKLFIGGLAGSVTSESMRDFFSQFGKVVDATVMLDRETGRSKGFGFVSFENVN 147
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
+ + G +DG +I V+ A+PR
Sbjct: 148 V--EPLLGFGNLEIDGKLIDVKLAQPR 172
>gi|389741761|gb|EIM82949.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 145
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S ++V LS TTD+TLR FS FG ++ + +++ RE+G S+GFGFV + T E A AI
Sbjct: 2 SAKVYVGNLSWNTTDDTLRQAFSEFGAILDSIVMRDRETGRSRGFGFVTFGTPEEADAAI 61
Query: 97 EGMDGKFLDGWVIFVEYAKPR 117
++ + LDG I V A +
Sbjct: 62 NNLNEQELDGRRIRVNLANAK 82
>gi|348588301|ref|XP_003479905.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 599
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 63 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 120
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 121 MNGMLLNDRKVFVGRFKSRK 140
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 154 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 212
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 213 EMNGKELNGKQIYVGRAQKK 232
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 257 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 314
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 315 EMNGRIVATKPLYVALAQRKE 335
>gi|149637721|ref|XP_001509272.1| PREDICTED: polyadenylate-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 636
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 250 EMNGKELNGKQIYVGRAQKK 269
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|384250449|gb|EIE23928.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 358
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLF+ + ++ L DTFSAFG ++ KI++ E+G +KGFGFV Y + EA+ AIE
Sbjct: 117 NLFIGNIDPDVDEKLLYDTFSAFGMIIQTPKIMRDPETGATKGFGFVSYDSFEASDAAIE 176
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G+FL I V +A
Sbjct: 177 AMNGQFLCNRPITVSFA 193
>gi|167533335|ref|XP_001748347.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773159|gb|EDQ86802.1| predicted protein [Monosiga brevicollis MX1]
Length = 406
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVV-HAKIVKHRESGYSKGFGFVKYATLEAAG 93
E NL++ L+ ++ L DTFSAFG ++ H K+++ E+G+SKGF F+ YAT EA+
Sbjct: 97 EVGANLYIGNLAPEVDEKLLFDTFSAFGVILQHPKVMRDLETGHSKGFAFINYATFEASD 156
Query: 94 KAIEGMDGKFLDGWVIFVEYA 114
AI+ M ++L I V YA
Sbjct: 157 AAIKAMHQQYLCNRPINVTYA 177
>gi|449284083|gb|EMC90664.1| Polyadenylate-binding protein 1, partial [Columba livia]
Length = 573
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 36 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 93
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 94 MNGMLLNDRKVFVGRFKSRK 113
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 127 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 185
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 186 EMNGKELNGKQIYVGRAQKK 205
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 230 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 287
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 288 EMNGRIVATKPLYVALAQRKE 308
>gi|426236179|ref|XP_004012050.1| PREDICTED: polyadenylate-binding protein 1 [Ovis aries]
Length = 577
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 41 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 98
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 99 MNGMLLNDRKVFVGRFKSRK 118
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 132 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 190
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 191 EMNGKELNGKQIYVGRAQKK 210
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 235 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 292
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 293 EMNGRIVATKPLYVALAQRKE 313
>gi|74212334|dbj|BAE30919.1| unnamed protein product [Mus musculus]
Length = 636
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ F FG + K++ E G SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-EGGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 250 EMNGKELNGKQIYVGRAQ 267
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|326917956|ref|XP_003205259.1| PREDICTED: polyadenylate-binding protein 1-like [Meleagris
gallopavo]
Length = 652
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 115 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 172
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 173 MNGMLLNDRKVFVGRFKSRK 192
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 206 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 264
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 265 EMNGKELNGKQIYVGRAQKK 284
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 309 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 366
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 367 EMNGRIVATKPLYVALAQRKE 387
>gi|323451637|gb|EGB07513.1| hypothetical protein AURANDRAFT_59062 [Aureococcus anophagefferens]
Length = 350
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAG 93
E NLFV GL ++ L DTFSAFG + KI++ ++G SKGFGFV Y + EA+
Sbjct: 97 EVGANLFVGGLDVDVDEKLLYDTFSAFGTITETPKIMRDPDTGNSKGFGFVSYDSFEASD 156
Query: 94 KAIEGMDGKFLDGWVIFVEYAKPRQPPT 121
AIE M +FL + V YA R T
Sbjct: 157 LAIECMHNQFLCNKQVQVGYAFKRDSKT 184
>gi|380709246|gb|AEE42608.1| glycine-rich RNA-binding protein 1, partial [Chelidonium majus]
Length = 146
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D++L FS++ +V +KI+ RE+G+S+GFGFV +A +A IEGM
Sbjct: 11 CFVGGLAWATDDQSLEKAFSSYRGIVESKIINDRETGWSRGFGFVTFANEQAMKDVIEGM 70
Query: 100 DGKFLD 105
+G+ LD
Sbjct: 71 NGQNLD 76
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 250 EMNGKELNGKQIYVGRAQKK 269
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|354498761|ref|XP_003511482.1| PREDICTED: polyadenylate-binding protein 1-like, partial
[Cricetulus griseus]
Length = 571
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 35 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 92
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 93 MNGMLLNDRKVFVGRFKSRK 112
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 126 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 184
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 185 EMNGKELNGKQIYVGRAQKK 204
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 229 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 286
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + +V A+ ++
Sbjct: 287 EMNGRIVATKPFYVALAQRKE 307
>gi|348522786|ref|XP_003448905.1| PREDICTED: transformer-2 protein homolog alpha-like [Oreochromis
niloticus]
Length = 279
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 14 RRLFSTSPFSSSL-NPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKH 72
R+ STSP S+ + R +PST L V GLS TT+ LR+ FS +G + +V
Sbjct: 94 RKSQSTSPMSNRRRHTGSRANPDPSTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYD 153
Query: 73 RESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPT 121
+ +G S+GF FV + LE + +A+E +G LDG I V+Y+ ++P T
Sbjct: 154 QRTGRSRGFAFVYFERLEDSKEAMERANGMELDGRRIRVDYSITKRPHT 202
>gi|397502367|ref|XP_003821832.1| PREDICTED: polyadenylate-binding protein 1 [Pan paniscus]
Length = 656
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 120 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 177
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 178 MNGMLLNDRKVFVGRFKSRK 197
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 211 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 269
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 270 EMNGKELNGKQIYVGRAQ 287
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 314 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 371
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+G+ + ++V A+
Sbjct: 372 EMNGRIVATKPLYVALAQ 389
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GLS T +E+L + F +G + +++ +E+G S+GFGFVKY ++E A A+ M
Sbjct: 7 LFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDAMTAM 66
Query: 100 DGKFLDGWVIFVEYA 114
+GK LDG I V+ A
Sbjct: 67 NGKSLDGRAIRVDEA 81
>gi|449431998|ref|XP_004133787.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
sativus]
gi|449477982|ref|XP_004155183.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Cucumis
sativus]
Length = 481
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ +F+ GLS+ +E LRD + GE+ +I+K ++SG SKG+ F+ + T EAA KAIE
Sbjct: 105 SEVFIGGLSRDVLEEDLRDMCESLGEIFEIRIIKDKDSGESKGYAFIAFKTKEAAQKAIE 164
Query: 98 GMDGKFLDGWVI 109
+ GK + G I
Sbjct: 165 DLHGKEVKGKTI 176
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 15 RLFSTSPFSSSLNPPQRPQAEPSTN---LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVK 71
+L SP S +P P + L+V + + TT E L++ F GEV +
Sbjct: 254 KLDGNSPTVSWADPKSMPDNSAAAQVKALYVKNIPENTTTEQLKELFQQHGEVTKVNMPP 313
Query: 72 HRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
+ + F F+ YA +A KA++ + ++G ++ V AKP+
Sbjct: 314 GKAGSSKRDFAFIHYAERSSALKAVKETEKYEIEGQLLEVVLAKPQ 359
>gi|115444455|ref|NP_001046007.1| Os02g0167500 [Oryza sativa Japonica Group]
gi|49387753|dbj|BAD26241.1| putative RNA-binding protein 10 [Oryza sativa Japonica Group]
gi|113535538|dbj|BAF07921.1| Os02g0167500 [Oryza sativa Japonica Group]
Length = 889
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
PS + V GLS++T ++ L + +G + +++K R SG S+GF F+ + T+EAA +
Sbjct: 166 PSATVVVKGLSQKTNEDDLNQILAEWGPLRSVRVIKERSSGMSRGFAFIDFPTVEAARRM 225
Query: 96 IEGM--DGKFLDGWVIFVEY-AKPRQPPTLPSQNNTNF 130
+EG+ +G +DG +F +Y +KP + PS NF
Sbjct: 226 MEGVGDNGLLIDGRKVFFQYSSKPTSGMSGPSHGEENF 263
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 23 SSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFG 82
S+ L+P + + P+ L V GL + +E LR F+ + ++V+ + + S+GF
Sbjct: 314 STPLHPKRGSELGPTHVLVVRGLDENADEEMLRYEFAKHAPIKDIRLVRDKFTHVSRGFA 373
Query: 83 FVKYATLEAAGKAIEGMDGKFLD--GWVIFVEYAKPRQPP-TLPSQNNT 128
F+ + ++E A KA+E +G L+ G V+ V YAK P + SQ+N+
Sbjct: 374 FIHFHSVEEATKALEATNGITLEKNGQVLRVTYAKSTHGPVSGASQSNS 422
>gi|49387752|dbj|BAD26240.1| putative RNA-binding protein 10 [Oryza sativa Japonica Group]
Length = 928
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
PS + V GLS++T ++ L + +G + +++K R SG S+GF F+ + T+EAA +
Sbjct: 166 PSATVVVKGLSQKTNEDDLNQILAEWGPLRSVRVIKERSSGMSRGFAFIDFPTVEAARRM 225
Query: 96 IEGM--DGKFLDGWVIFVEY-AKPRQPPTLPSQNNTNF 130
+EG+ +G +DG +F +Y +KP + PS NF
Sbjct: 226 MEGVGDNGLLIDGRKVFFQYSSKPTSGMSGPSHGEENF 263
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 23 SSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFG 82
S+ L+P + + P+ L V GL + +E LR F+ + ++V+ + + S+GF
Sbjct: 314 STPLHPKRGSELGPTHVLVVRGLDENADEEMLRYEFAKHAPIKDIRLVRDKFTHVSRGFA 373
Query: 83 FVKYATLEAAGKAIEGMDGKFLD--GWVIFVEYAKPRQPP-TLPSQNNT 128
F+ + ++E A KA+E +G L+ G V+ V YAK P + SQ+N+
Sbjct: 374 FIHFHSVEEATKALEATNGITLEKNGQVLRVTYAKSTHGPVSGASQSNS 422
>gi|294460169|gb|ADE75667.1| unknown [Picea sitchensis]
Length = 216
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%)
Query: 34 AEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAG 93
+ P NL+V+GLS R + L + FS G+VV +IV S S+GFGFV TLE A
Sbjct: 59 SNPGNNLYVTGLSARVVEADLEELFSQEGKVVDCRIVVDPRSRESRGFGFVTMDTLENAD 118
Query: 94 KAIEGMDGKFLDGWVIFVEYAK 115
+ ++ ++ L+G +I VE AK
Sbjct: 119 RCVKYLNRSTLEGRIITVEKAK 140
>gi|449438165|ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215898 [Cucumis sativus]
gi|449478936|ref|XP_004155458.1| PREDICTED: uncharacterized protein LOC101227324 [Cucumis sativus]
Length = 211
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
E F+ GLS T+D L++ F FG +V AK+V + SG S+GFGFV + +A +
Sbjct: 4 EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDE 63
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQ 118
AI+ M+G LDG I V+ A+P Q
Sbjct: 64 AIKAMNGMDLDGRSITVDKAQPNQ 87
>gi|432107630|gb|ELK32863.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 565
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 29 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 86
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 87 MNGMLLNDRKVFVGRFKSRK 106
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 178
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 179 EMNGKELNGKQIYVGRAQKK 198
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 223 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 280
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 281 EMNGRIVATKPLYVALAQRKE 301
>gi|30681492|ref|NP_850017.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|330252116|gb|AEC07210.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 159
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D L F+ +G+V+ +KI+ RE+G S+GFGFV + +A AIEGM
Sbjct: 10 CFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAK 115
+G+ LDG I V A+
Sbjct: 70 NGQDLDGRSITVNEAQ 85
>gi|21553354|gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D L F+ +G+V+ +KI+ RE+G S+GFGFV + +A AIEGM
Sbjct: 10 CFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAK 115
+G+ LDG I V A+
Sbjct: 70 NGQDLDGRSITVNEAQ 85
>gi|410987610|ref|XP_004000091.1| PREDICTED: polyadenylate-binding protein 1 [Felis catus]
Length = 672
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 136 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 193
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 194 MNGMLLNDRKVFVGRFKSRK 213
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 227 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 285
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 286 EMNGKELNGKQIYVGRAQKK 305
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 330 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 387
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 388 EMNGRIVATKPLYVALAQRKE 408
>gi|344257059|gb|EGW13163.1| Polyadenylate-binding protein 1 [Cricetulus griseus]
Length = 565
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 29 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 86
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 87 MNGMLLNDRKVFVGRFKSRK 106
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 178
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 179 EMNGKELNGKQIYVGRAQKK 198
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 223 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 280
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + +V A+ ++
Sbjct: 281 EMNGRIVATKPFYVALAQRKE 301
>gi|227204227|dbj|BAH56965.1| AT2G21660 [Arabidopsis thaliana]
Length = 153
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D L F+ +G+V+ +KI+ RE+G S+GFGFV + +A AIEGM
Sbjct: 10 CFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAK 115
+G+ LDG I V A+
Sbjct: 70 NGQDLDGRSITVNEAQ 85
>gi|224135077|ref|XP_002327561.1| predicted protein [Populus trichocarpa]
gi|222836115|gb|EEE74536.1| predicted protein [Populus trichocarpa]
Length = 988
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
PS + V GLS++TTDE L + +G + H +++K R SG S+GF F+ + ++ AA
Sbjct: 262 PSATVVVKGLSQKTTDEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVGAACAM 321
Query: 96 IE--GMDGKFLDGWVIFVEYAKP 116
++ G DG +D +F EY+KP
Sbjct: 322 MDRIGDDGLVVDDRKLFFEYSKP 344
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A P+ L V GL +E LR FS + ++V+ + + S+GF FV + ++E A
Sbjct: 415 EAGPTHVLVVRGLDDNADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFHSVEDA 474
Query: 93 GKAIEGMDGKFLD--GWVIFVEYAK 115
KA++ G L+ G ++ V YAK
Sbjct: 475 TKALDATIGTTLEKNGQILRVAYAK 499
>gi|338728570|ref|XP_001492678.3| PREDICTED: polyadenylate-binding protein 1 [Equus caballus]
Length = 565
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 29 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 86
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 87 MNGMLLNDRKVFVGRFKSRK 106
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 178
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 179 EMNGKELNGKQIYVGRAQKK 198
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 223 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 280
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 281 EMNGRIVATKPLYVALAQRKE 301
>gi|15226605|ref|NP_179760.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|544424|sp|Q03250.1|GRP7_ARATH RecName: Full=Glycine-rich RNA-binding protein 7
gi|16226372|gb|AAL16149.1|AF428381_1 At2g22292/F2G1.7_ [Arabidopsis thaliana]
gi|16301|emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana]
gi|166837|gb|AAA32853.1| RNA-binding protein [Arabidopsis thaliana]
gi|4567224|gb|AAD23639.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
gi|15810032|gb|AAL06943.1| At2g21660/F2G1.7 [Arabidopsis thaliana]
gi|330252115|gb|AEC07209.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 176
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D L F+ +G+V+ +KI+ RE+G S+GFGFV + +A AIEGM
Sbjct: 10 CFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGM 69
Query: 100 DGKFLDGWVIFVEYAK 115
+G+ LDG I V A+
Sbjct: 70 NGQDLDGRSITVNEAQ 85
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 250 EMNGKELNGKQIYVGRAQKK 269
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|440913295|gb|ELR62762.1| Polyadenylate-binding protein 1, partial [Bos grunniens mutus]
Length = 572
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 36 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 93
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 94 MNGMLLNDRKVFVGRFKSRK 113
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 127 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 185
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 186 EMNGKELNGKQIYVGRAQKK 205
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 230 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 287
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 288 EMNGRIVATKPLYVALAQRKE 308
>gi|407410696|gb|EKF33036.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 477
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNLF+S + + L + F+ +G+++ A ++++ +G S G FV+YAT E A +AIE
Sbjct: 115 TNLFISNIPHKMEQRELENLFAPYGQILSAAVMRNIHTGNSLGTAFVRYATTEEAMRAIE 174
Query: 98 GMDGKFLDGWVIFVEYAK 115
GM GK + G I V++AK
Sbjct: 175 GMSGKRIGGRAIAVQWAK 192
>gi|357112177|ref|XP_003557886.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
[Brachypodium distachyon]
Length = 272
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
++V LS D L + F+ G V+ A+++ RESG S+GFGFV Y + E KA+ +
Sbjct: 189 VYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRESGRSRGFGFVTYGSSEEVEKAVSNL 248
Query: 100 DGKFLDGWVIFVEYAKPRQP 119
DG LDG I V A+ RQP
Sbjct: 249 DGTDLDGRQIRVTVAEARQP 268
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
+FV L L F G V +++ + +G S+GFGFV +T+E +A+E +
Sbjct: 79 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVEQL 138
Query: 100 DGKFLDGWVIFVEYAKPRQPP 120
+G LDG I V P PP
Sbjct: 139 NGYVLDGRTIKVNSGPP--PP 157
>gi|345493621|ref|XP_003427111.1| PREDICTED: ELAV-like protein 3-like isoform 3 [Nasonia vitripennis]
gi|345493623|ref|XP_001603257.2| PREDICTED: ELAV-like protein 3-like isoform 1 [Nasonia vitripennis]
Length = 349
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 50/90 (55%)
Query: 27 NPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKY 86
N Q Q E TNL V+ L + T E +R FS+ GEV K+++ + +G S G+GFV Y
Sbjct: 17 NLGQSSQEESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKLTGQSLGYGFVNY 76
Query: 87 ATLEAAGKAIEGMDGKFLDGWVIFVEYAKP 116
E A KAI ++G L I V YA+P
Sbjct: 77 HRPEDAEKAINTLNGLRLQNKTIKVSYARP 106
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
+FV L+ T + L F FG V K+++ ++ KGFGFV E A AI+ +
Sbjct: 268 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 327
Query: 100 DGKFLDGWVIFVEY 113
+G L V+ V +
Sbjct: 328 NGYTLGNRVLQVSF 341
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 23/114 (20%)
Query: 31 RPQAEP--STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRES------------- 75
RP +E NL+VSGL K T + L + FS +G ++ ++I+ +
Sbjct: 105 RPSSEAIKGANLYVSGLPKNMTQQDLENLFSPYGRIITSRILCDNITVRQFVTGGGDNLP 164
Query: 76 GYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWV--IFVEYAKPRQPPTLPSQNN 127
G SKG GF+++ A +AI+ ++G G I V++A PS NN
Sbjct: 165 GLSKGVGFIRFDQRVEAERAIQELNGTIPKGSTEPITVKFANN------PSNNN 212
>gi|307168947|gb|EFN61833.1| ELAV-like protein 4 [Camponotus floridanus]
Length = 466
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q Q E TNL V+ L + T + +R FS+ GEV K+++ + SG S G+GFV Y
Sbjct: 20 QTSQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRP 79
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKP 116
E A KAI ++G L I V YA+P
Sbjct: 80 EDAEKAINTLNGLRLQNKTIKVSYARP 106
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
+FV L+ T + L F FG V K+++ ++ KGFGFV E A AI+ +
Sbjct: 291 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 350
Query: 100 DGKFLDGWVI 109
+G L V+
Sbjct: 351 NGYTLGNRVL 360
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 23/114 (20%)
Query: 31 RPQAEP--STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRES------------- 75
RP +E NL+VSGL K + L + FS +G ++ ++I+ +
Sbjct: 105 RPSSEAIKGANLYVSGLPKNMAQQDLENLFSPYGRIITSRILCDNITVRQFVTGGGDNLP 164
Query: 76 GYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWV--IFVEYAKPRQPPTLPSQNN 127
G SKG GF+++ A +AI+ ++G G I V++A PS NN
Sbjct: 165 GLSKGVGFIRFDQRVEAERAIQELNGTIPKGSSEPITVKFANN------PSNNN 212
>gi|281350417|gb|EFB26001.1| hypothetical protein PANDA_001865 [Ailuropoda melanoleuca]
Length = 640
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 104 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 161
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 162 MNGMLLNDRKVFVGRFKSRK 181
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 195 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 253
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 254 EMNGKELNGKQIYVGRAQ 271
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 298 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 355
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 356 EMNGRIVATKPLYVALAQRKE 376
>gi|297743165|emb|CBI36032.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
E ++NL+V L D+ L++ FS+ G++ AK+++H +SG SKGFGFV ++T E A K
Sbjct: 306 EKASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRH-DSGLSKGFGFVCFSTSEEAQK 364
Query: 95 AIEGMDGKFLDGWVIFVEYAKPRQ 118
A+ ++G L G +++ A+ ++
Sbjct: 365 ALTTLNGTLLHGRSLYIAMAQRKE 388
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 14 RRLFSTSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHR 73
++LF S F + + TN++V L + T++ +RD FS FG+V I+K
Sbjct: 184 KKLF-VSKFVKKCERKEASEETKFTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDG 242
Query: 74 ESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
+G S+GFGFV + + + A KA+E ++G L +FV A+ +
Sbjct: 243 -NGKSRGFGFVNFESPDEAKKAVEALNGAMLGSKKLFVGRAQKK 285
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 32 PQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEA 91
P+ NLFV L +L+D F FG ++ K+ + E+G SK FGFV++ + ++
Sbjct: 111 PRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAE--ENGKSKCFGFVQFDSDDS 168
Query: 92 AGKAIEGMDGKFLDGWVIFV 111
A A+ ++ LDG +FV
Sbjct: 169 ATAALNALNDTMLDGKKLFV 188
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 59/102 (57%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
++ P+ NLFV +S +E L F FGE+ +I+ R+SG SKGFG+V+++ + A
Sbjct: 237 ESAPTGNLFVGNISWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFSDPQNA 296
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQNNTNFQYGR 134
KA+E +G LDG + ++++ PR + N +N + R
Sbjct: 297 KKALEAKNGAELDGRELRLDFSTPRTNDGPGAGNKSNDRAAR 338
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P+ LFV +S + + + F G + ++ RE+G KGFG+V+ +++E A A
Sbjct: 346 PAATLFVGNISFDADENAITEYFQEHGTIKAVRLPTDRETGAPKGFGYVEMSSIEEAQAA 405
Query: 96 IEGMDGKFLDGWVIFVEYAKPR 117
+ G + G I ++YA R
Sbjct: 406 FTALQGADIAGRPIRLDYAAER 427
>gi|115384864|ref|XP_001208979.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196671|gb|EAU38371.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 157
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%)
Query: 43 SGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGK 102
SGL+ TTDE+LR F FG V +A +VK R++G S+GFGFV + + + A A+ ++ +
Sbjct: 34 SGLAWHTTDESLRAGFEKFGTVDNAIVVKDRDTGRSRGFGFVTFTSPQEADAALNELNNQ 93
Query: 103 FLDGWVIFVEYAKPRQPP 120
DG +I V++A R P
Sbjct: 94 EFDGRIIRVDFASERNGP 111
>gi|444721742|gb|ELW62457.1| Polyadenylate-binding protein 4-like protein [Tupaia chinensis]
Length = 370
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R +A TN+++ DE LR+ FS +G+ + K++ SG SKGFGFV + E
Sbjct: 183 RNKASEFTNVYIKNFGDDMDDERLREVFSKYGKTLSVKVMTD-PSGKSKGFGFVSFDNHE 241
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
AA KA+E M+GK ++G +IFV A+ +
Sbjct: 242 AAQKAVEEMNGKDINGQLIFVGRAQKK 268
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L + ++TL + FSAFG+++ +K++ + SKG+ FV + AA +AIE
Sbjct: 99 NVFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEE 156
Query: 99 MDGKFLDGWVIFVEYAKPRQPPTLPSQN 126
M+GK L +FV K R+ +N
Sbjct: 157 MNGKLLKDCKVFVGRFKNRKDREAELRN 184
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R + L++ L DE LR FS+FG + K+++ E G SKGFG + +++
Sbjct: 285 ERIRKCQGVKLYIKNLDDTIDDEKLRKEFSSFGSISRVKVMQ--EEGQSKGFGLICFSSP 342
Query: 90 EAAGKAIEGMDGKFL 104
E A KA+ M+G+ L
Sbjct: 343 EEATKAMTEMNGQIL 357
>gi|212274429|ref|NP_001130902.1| uncharacterized protein LOC100192006 [Zea mays]
gi|194690404|gb|ACF79286.1| unknown [Zea mays]
gi|413934109|gb|AFW68660.1| hypothetical protein ZEAMMB73_687460 [Zea mays]
Length = 357
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVV-HAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLF+ L ++ L DTFSAFG +V + KI++ E+G S+GFGFV Y + E++ +AIE
Sbjct: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIE 172
Query: 98 GMDGKFLDGWVIFVEYA 114
M+ + L I V YA
Sbjct: 173 AMNNQHLCNRPITVSYA 189
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 41 FVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMD 100
+V L + ++E L + F G VV+ + K R + +G+GFV++ + E A AI+ ++
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKTLN 87
Query: 101 GKFLDGWVIFVEYA 114
L G I V A
Sbjct: 88 MIKLYGKPIRVNKA 101
>gi|351695842|gb|EHA98760.1| Polyadenylate-binding protein 1 [Heterocephalus glaber]
Length = 709
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 190 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 247
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 248 MNGMLLNDRKVFVGRFKSRK 267
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 281 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 339
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 340 EMNGKELNGKQIYVGRAQ 357
>gi|332820240|ref|XP_526690.3| PREDICTED: polyadenylate-binding protein 4-like [Pan troglodytes]
Length = 428
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R +A TN+++ DE L+D FS +G+ + K++ SG SKGFGFV + + E
Sbjct: 241 RSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHE 299
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
AA KA+E M+G+ ++G +IFV A+ +
Sbjct: 300 AAKKAVEEMNGRDINGQLIFVGRAQKK 326
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++TL + FSAFG+++ +K++ + SKG+ FV + AA +AIE
Sbjct: 157 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEE 214
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+GK L G +FV K R+
Sbjct: 215 MNGKLLKGCKVFVGRFKNRK 234
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R + L++ L DE LR+ FS+FG + K+++ E G SKGFG + +++
Sbjct: 343 ERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQ--EEGQSKGFGLICFSSP 400
Query: 90 EAAGKAIEGMDGKFL 104
E A KA+ M+G+ L
Sbjct: 401 EDATKAMTEMNGRIL 415
>gi|297674344|ref|XP_002815190.1| PREDICTED: polyadenylate-binding protein 4-like [Pongo abelii]
Length = 428
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R +A TN+++ DE L+D FS +G+ + K++ SG SKGFGFV + + E
Sbjct: 241 RSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHE 299
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
AA KA+E M+G+ ++G +IFV A+ +
Sbjct: 300 AAKKAVEEMNGRDINGQLIFVGRAQKK 326
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++TL + FSAFG+++ +K++ + SKG+ FV + AA +AIE
Sbjct: 157 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEE 214
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+GK L G +FV K R+
Sbjct: 215 MNGKLLKGCKVFVGRFKNRK 234
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L++ L DE LR+ FS+FG + K+++ E G SKGFG + +++ E A KA+ M
Sbjct: 353 LYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQ--EEGQSKGFGLICFSSPEDATKAMTEM 410
Query: 100 DGKFL 104
+G+ L
Sbjct: 411 NGRIL 415
>gi|115470953|ref|NP_001059075.1| Os07g0187300 [Oryza sativa Japonica Group]
gi|33146923|dbj|BAC79944.1| glycine-rich RNA-binding protein-like [Oryza sativa Japonica Group]
gi|50509452|dbj|BAD31070.1| glycine-rich RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113610611|dbj|BAF20989.1| Os07g0187300 [Oryza sativa Japonica Group]
gi|222636576|gb|EEE66708.1| hypothetical protein OsJ_23377 [Oryza sativa Japonica Group]
Length = 308
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
+FV GLS TT+ TL FS +G+V+ ++V R++G S+GFGFV ++ A AI GM
Sbjct: 9 IFVGGLSWDTTERTLERAFSEYGKVIETQVVLERDTGRSRGFGFVTFSEPRAVDAAIRGM 68
Query: 100 DGKFLDGWVIFVEYAKPR 117
LDG I V A+PR
Sbjct: 69 HNGELDGRTISVNKAQPR 86
>gi|392410002|ref|YP_006446609.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
gi|390623138|gb|AFM24345.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
Length = 118
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 16 LFSTSPFSSSLNPPQRPQAEPSTN---LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKH 72
LFS+ P + P+ E ++ +V +S +T DE LRD F +G+V AK++
Sbjct: 10 LFSSMNGRVCCIPVEYPRKESPSDRNQFYVGNISFKTEDEQLRDLFETYGQVDAAKVIID 69
Query: 73 RESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
R +G S+GFGFV+ +A +AIE +D K G + V A+PR+
Sbjct: 70 RATGRSRGFGFVEMPDRDAGLRAIEDLDSKDFMGRSLRVNEARPRK 115
>gi|20257701|gb|AAM16016.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
FV GL+ T D +L + FS +GEV+ +KI+ RE+ S+GFGFV ++ AIEGM
Sbjct: 19 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXXXRSAIEGM 78
Query: 100 DGKFLDGWVIFVEYAKP 116
+GK LDG I V A+
Sbjct: 79 NGKELDGRNITVNEAQS 95
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFV 111
M+G L+ +FV
Sbjct: 158 MNGMLLNDRKVFV 170
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 249
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 250 EMNGKELNGKQIYVGRAQ 267
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|195429537|ref|XP_002062815.1| GK19652 [Drosophila willistoni]
gi|194158900|gb|EDW73801.1| GK19652 [Drosophila willistoni]
Length = 638
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQR---PQAEPST------NLFVSGLSKRTTDETLRDTFSA 60
P R T F N P R Q +PS N+F+ L ++ ++ + DTFSA
Sbjct: 53 PADAERALDTMNFDLIRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRQIDNKAIYDTFSA 112
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
FG ++ K+ E G SKG+GFV + T EAA +IE ++G L+G ++V PR+
Sbjct: 113 FGNILSCKVALD-EKGNSKGYGFVHFETEEAANTSIEKVNGMLLNGKKVYVGKFIPRK 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V ++ DE L+D F +G++ K++ +E G SKGFGFV + T EAA A++
Sbjct: 183 TNVYVKNFTEEFDDEKLKDFFEPYGKITSYKVMS-KEDGKSKGFGFVAFETTEAAEAAVQ 241
Query: 98 GMDGKFL-DGWVIFVEYAKPR 117
++GK + +G ++V A+ +
Sbjct: 242 ALNGKDMGEGKSLYVARAQKK 262
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS +G + AK++ E G SKGFGFV + + A A+
Sbjct: 287 VNLYVKNLDDSIDDERLRKEFSLYGTITSAKVMTD-EEGRSKGFGFVCFISPNEATCAVT 345
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
++G+ + ++V A+ ++
Sbjct: 346 ELNGRVVGSKPLYVALAQRKE 366
>gi|393215487|gb|EJD00978.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 247
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 28 PPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYA 87
P Q PQ PS L V GLS R+T+ L + FS FG V IV + S S+GFGF+K A
Sbjct: 26 PVQNPQ--PSNVLGVFGLSIRSTERDLDEEFSRFGRVEKVTIVYDQRSDRSRGFGFIKLA 83
Query: 88 TLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQP--PT----LPSQNNTNFQYGRQ 135
++E A + I+ ++G L+G I V+Y+ +P PT + + NT Y R+
Sbjct: 84 SVEDAARCIQELNGVELNGRRIRVDYSVTERPHAPTPGEYMGHRRNTGRDYDRR 137
>gi|333993552|ref|YP_004526165.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
gi|333734416|gb|AEF80365.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
Length = 100
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L+V LS +TT++ LR+ FS FG V +KI+ RESG SKGFGF++ +T E A AI G
Sbjct: 5 LYVGNLSYQTTEDGLRNLFSQFGNVTSSKIIFDRESGSSKGFGFIEMSTDEEAAAAITGT 64
Query: 100 DGKFLDGWVIFVEYA--KPRQP 119
+G +G + V A KPR+
Sbjct: 65 NGHEFEGRQLRVNEAMDKPRRD 86
>gi|426360413|ref|XP_004047438.1| PREDICTED: polyadenylate-binding protein 1 [Gorilla gorilla
gorilla]
Length = 682
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 146 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 203
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 204 MNGMLLNDRKVFVGRFKSRK 223
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 29 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 86
Query: 99 MDGKFLD 105
M+G L+
Sbjct: 87 MNGMLLN 93
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 237 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 295
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 296 EMNGKELNGKQIYVGRAQKK 315
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 340 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVT 397
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 398 EMNGRIVATKPLYVALAQRKE 418
>gi|440300922|gb|ELP93369.1| 29 kDa ribonucleoprotein, putative [Entamoeba invadens IP1]
Length = 248
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 11/96 (11%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
T L+V LS +TT+E ++ F +FG+V +++ +R GYSKGFGFV+Y T E A KA+
Sbjct: 2 TKLYVGNLSFKTTEEAMKTHFESFGKVKECRLMIYR--GYSKGFGFVEYETEEDAKKAVA 59
Query: 98 GMDGKFLDGWVIFVEYAKP------RQP--PTLPSQ 125
+F DG + VE A+P RQP P P Q
Sbjct: 60 STGAEF-DGRKVRVEVARPPVDRSQRQPRQPRAPRQ 94
Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 10 PRGLRRLFSTSPFSSSLNPP-QRPQAEP-----STNLFVSGLSKRTTDETLRDTFSAFGE 63
PRG RR + + + P++E T +FV L+ TD+ L+ TF F
Sbjct: 118 PRGYRRFNNERRPVYNRRRRNEAPKSEEKQEFSETLVFVGNLAFAATDDDLKKTFEKFN- 176
Query: 64 VVHAKIVKH-RESGYSKGFGFVKYATLEAAGKAIEGMD 100
VV AK+V R SKGFGFV+ T E AI+ ++
Sbjct: 177 VVSAKVVTFGRTYVKSKGFGFVELKTKEDQQNAIKELN 214
>gi|291514454|emb|CBK63664.1| RNA-binding proteins (RRM domain) [Alistipes shahii WAL 8301]
Length = 116
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++VS LS T+ E L + F FGEV A ++ RE+G S+GFGFV+ E KAI+
Sbjct: 2 NIYVSHLSWGTSSEGLGNLFMQFGEVASANVITDRETGRSRGFGFVEMPNEEEGQKAIDQ 61
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G +G I V A+PR+
Sbjct: 62 LNGTSFEGQTITVNVARPRE 81
>gi|18422781|ref|NP_568681.1| small subunit ribosomal protein S19 [Arabidopsis thaliana]
gi|21542438|sp|P39697.2|RT19_ARATH RecName: Full=40S ribosomal protein S19, mitochondrial; Flags:
Precursor
gi|15028321|gb|AAK76637.1| putative 40S ribosomal protein S19 [Arabidopsis thaliana]
gi|20259155|gb|AAM14293.1| putative 40S ribosomal protein S19 [Arabidopsis thaliana]
gi|332008115|gb|AED95498.1| small subunit ribosomal protein S19 [Arabidopsis thaliana]
Length = 212
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST L++ GLS T + +L+D FS+F V A+++ ++ +G S+G+GFV + + ++A AI
Sbjct: 30 STKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAI 89
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLP 123
M+G+ L+G+ I V AK P+LP
Sbjct: 90 SAMNGQELNGFNISVNVAK--DWPSLP 114
>gi|156554126|ref|XP_001604025.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Nasonia
vitripennis]
Length = 627
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ ++ + ESG SKG+GFV + T EAA K+I+
Sbjct: 100 NVFIKNLDKNIDNKAMYDTFSAFGNILSCRVAQD-ESGSSKGYGFVHFETEEAANKSIDR 158
Query: 99 MDGKFLDGWVIFV 111
++G L+G ++V
Sbjct: 159 VNGMLLNGKKVYV 171
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + K++ E G SKGFGFV ++ E A KA+
Sbjct: 296 VNLYVKNLDDTIDDERLRKEFAPFGTITSVKVMM--EDGRSKGFGFVCFSLAEEATKAVT 353
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 354 EMNGRIVGSKPLYVALAQRKE 374
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + TD+ L++ F +G + K++ ++ G S+GFGFV + AA +A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMS-KDDGKSRGFGFVAFEDPNAADRAVA 250
Query: 98 GMDGKFL-DGWVIFVEYAKPR 117
++GK + +G +++V A+ +
Sbjct: 251 DLNGKEIAEGKIMYVGRAQKK 271
>gi|449681524|ref|XP_002157695.2| PREDICTED: splicing factor 3B subunit 4-like [Hydra magnipapillata]
Length = 328
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
N+F+ L ++ L DTFSAFG ++ KI++ E+G SKGF F+ +A+ EA+ AI+
Sbjct: 58 NIFIGNLDPDIDEKLLYDTFSAFGVILTTPKIMRDPETGNSKGFAFINFASFEASDAAID 117
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G++L I V Y+
Sbjct: 118 AMNGQYLSNRPISVSYS 134
>gi|357454121|ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355486389|gb|AES67592.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|388509994|gb|AFK43063.1| unknown [Medicago truncatula]
Length = 89
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
T LFVS LS TT + L FS FG + A ++ + + KGFGFV Y + A KA +
Sbjct: 7 TKLFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKARK 66
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
++G+ +DG +IFVE+AKP+
Sbjct: 67 ALNGRIVDGRLIFVEHAKPK 86
>gi|367020484|ref|XP_003659527.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila ATCC
42464]
gi|347006794|gb|AEO54282.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila ATCC
42464]
Length = 153
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ LF+ GL+ T + TLR F FGEV A +VK R++G S+GFGFV+Y + A KAI
Sbjct: 2 SKLFIGGLAWHTEEATLRQKFEEFGEVEEAVVVKDRDTGRSRGFGFVRYINEDDAQKAIT 61
Query: 98 GMDGKFLDGWVIFVEYA 114
M+ DG I V+ A
Sbjct: 62 AMNNVEFDGRQIRVDKA 78
>gi|444727464|gb|ELW67955.1| Nucleolin [Tupaia chinensis]
Length = 187
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
Query: 28 PPQRPQA--EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVK 85
P + P A +PS LFV GLS+ TT+ETL+++F + V A+IV RE+ KGFGFV
Sbjct: 57 PRESPNARRQPSKTLFVKGLSEDTTEETLKESFD---DPVRARIVTDRETVSFKGFGFVD 113
Query: 86 YATLEAAGKAIEGMDGKFLDGWVIFVEYAKPR 117
+ + E A A E M+ +DG + +++AKP+
Sbjct: 114 FNSEEDAKAAKETMEDGEIDGNKVTLDWAKPK 145
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 70 VKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTLPSQ 125
V ++G SKG+ F+++A+ E A +A+ + + ++G I +E PR+ P Q
Sbjct: 11 VPQSQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRESPNARRQ 66
>gi|367030019|ref|XP_003664293.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
gi|347011563|gb|AEO59048.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
Length = 787
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L ++ L DTF+AFG ++ K+ + E+G SKG+GFV Y T EAA +AI+
Sbjct: 153 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAAAQAIKH 211
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+ ++V Y P++
Sbjct: 212 VNGMLLNEKKVYVGYHIPKK 231
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V ++ T+E R+ FS +GEV + + + +E G S+GFGFV ++T ++A KA+E
Sbjct: 245 TNVYVKNINLEVTEEEFRELFSKYGEVTSSTLARDQE-GKSRGFGFVNFSTHDSAAKAVE 303
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
++GK G ++V A+ +
Sbjct: 304 ELNGKEFRGQELYVGRAQKKH 324
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 32 PQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEA 91
P + S +L+V L T+ L + FS G V ++ + + S G+ +V Y +
Sbjct: 58 PHPQSSASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTAD 117
Query: 92 AGKAIEGMDGKFLDG 106
KA+E ++ + G
Sbjct: 118 GEKALEELNYTLIKG 132
>gi|146078133|ref|XP_001463467.1| RNA-binding protein 5-like protein [Leishmania infantum JPCM5]
gi|398010986|ref|XP_003858689.1| RNA-binding protein 5-like protein [Leishmania donovani]
gi|134067553|emb|CAM65832.1| RNA-binding protein 5-like protein [Leishmania infantum JPCM5]
gi|322496899|emb|CBZ31969.1| RNA-binding protein 5-like protein [Leishmania donovani]
Length = 245
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
S N++V+ L D+ L+D FS +G +V A+I++ ++S SKG+GFV + + +A KAI
Sbjct: 19 SRNVYVASLPLSFDDQQLQDLFSPYGRIVSARIMRAKKSHASKGYGFVMFREVSSAEKAI 78
Query: 97 EGMDGKFLDGWVIFVEYAK 115
EG+ G+ +DG I V A
Sbjct: 79 EGLHGRVVDGSRIQVRRAN 97
>gi|428161292|gb|EKX30760.1| hypothetical protein GUITHDRAFT_123023 [Guillardia theta CCMP2712]
Length = 209
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHA--KIVKHRESGYSKGFGFVKYATLEAAGKAI 96
NLF+ L ++ L DTFSAFG +V K ++ E+G SKGF FV Y EAA AI
Sbjct: 104 NLFIGNLEPEVDEKLLYDTFSAFGVIVGNTPKCMRDPETGQSKGFAFVNYDCFEAADMAI 163
Query: 97 EGMDGKFLDGWVIFVEYA 114
E M+G++L G I V+YA
Sbjct: 164 EAMNGQYLCGRPISVQYA 181
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 22 FSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGF 81
++SS + P+R Q ++V ++++ T+E L + F G VV+ I + + + GF
Sbjct: 2 YTSSQHVPERNQ---DATIYVGNITEKCTEEILWELFLQAGPVVNVHIPRDKVTTVHSGF 58
Query: 82 GFVKYATLEAAGKAIEGMDGKFLDG 106
GFV++ + E A AI+ M+ L G
Sbjct: 59 GFVEFRSEEDAEYAIKIMNMIKLHG 83
>gi|397485813|ref|XP_003814033.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Pan paniscus]
Length = 427
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R +A TN+++ DE L+D FS +G+ + K++ SG SKGFGFV + + E
Sbjct: 240 RSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHE 298
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
AA KA+E M+G+ ++G +IFV A+ +
Sbjct: 299 AAKKAVEEMNGRDINGQLIFVGRAQKK 325
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++TL + FSAFG+++ +K++ + SKG+ FV + AA +AIE
Sbjct: 156 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEE 213
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+GK L G +FV K R+
Sbjct: 214 MNGKLLKGCKVFVGRFKNRK 233
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R + L++ L DE LR+ FS+FG + K+++ E G SKGFG + +++
Sbjct: 342 ERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQ--EEGQSKGFGLICFSSP 399
Query: 90 EAAGKAIEGMDGKFL 104
E A KA+ M+G+ L
Sbjct: 400 EDATKAMTEMNGRIL 414
>gi|145493210|ref|XP_001432601.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399714|emb|CAK65204.1| unnamed protein product [Paramecium tetraurelia]
Length = 388
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 5 AAVAAPRGLRRLFSTSPFSSSLNP-PQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGE 63
+ + +P G + + + + + L + P NLFV L D L D FS++G
Sbjct: 250 SIIYSPDGSKEIITKEKYLNDLATFNSKKTGPPGANLFVFHLPNEHKDSDLMDLFSSYGN 309
Query: 64 VVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTLP 123
V+ A+++ ++G SKGFGFV + E+A KA E MDG +D + V + + P P
Sbjct: 310 VISARVMTDPKTGKSKGFGFVSFDKQESAQKAKEAMDGHLIDKKKLSVTFKQGDGTPCQP 369
Query: 124 SQ 125
Q
Sbjct: 370 LQ 371
>gi|432102707|gb|ELK30188.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 650
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
+LFV L++ T DE LR F+ FG V AK++ + G KGFGFV +++ E A KA+E
Sbjct: 303 SLFVKNLAESTDDEHLRKIFAPFGTVTSAKVIV--KGGRRKGFGFVSFSSREEAKKAVEE 360
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M GK L ++V YA+ +Q
Sbjct: 361 MHGKMLSARPLYVSYARYKQ 380
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R + E TN++V + TTDE L + FS +G + KI+ +SG SKGFGF+++
Sbjct: 191 RRAKMEQFTNVYVKNFADGTTDEYLLEIFSQYGPLSSVKIMTD-DSGKSKGFGFIRFECH 249
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
A +AIE ++GK G I+V A+ ++
Sbjct: 250 ADAKRAIEEVNGKQFGGRKIYVSRAQKKK 278
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+FV+ L ++ L D F+ FG ++ K+V E+G KG GFV + T EAA KAI+
Sbjct: 108 NVFVNHLDASIDNKELYDLFAGFGTILSCKVVSD-ENG-PKGHGFVHFETREAADKAIKE 165
Query: 99 MDGKFLDGWVIFV-EYAKPRQ 118
M+G + +FV ++ +P Q
Sbjct: 166 MNGSLVKERKVFVGQFKRPNQ 186
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
PS +L+V L T+ L + FSA G ++ ++ + S S G+G+V + E AG A
Sbjct: 17 PSASLYVGDLHPEVTEAMLYEKFSAAGPILSVRVCRDALSSRSLGYGYVNFHRPEDAGHA 76
Query: 96 IEGMDGKFLDG 106
+ M+ L G
Sbjct: 77 LNTMNFDVLHG 87
>gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 87 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERAIEK 144
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 145 MNGMLLNDRKVFVGRFKSRK 164
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ FS +G + +++ +SG SKGFGFV + E A KA++
Sbjct: 178 TNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTD-DSGKSKGFGFVSFERHEDAQKAVD 236
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G ++V A+ +
Sbjct: 237 DMNGKELNGRQVYVGRAQKK 256
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 281 VNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 338
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 339 EMNGRIVATKPLYVALAQRKE 359
>gi|297632376|ref|NP_001172077.1| ELAV-like protein 1 [Oryctolagus cuniculus]
gi|296399062|gb|ADH10369.1| embryonic lethal abnormal vision-like 1 protein [Oryctolagus
cuniculus]
Length = 326
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL V+ L + T E LR FS+ GEV AK+++ + +G+S G+GFV Y T + A KAI
Sbjct: 20 TNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAEKAIN 79
Query: 98 GMDGKFLDGWVIFVEYAKP 116
++G L I V YA+P
Sbjct: 80 TLNGLRLQSKTIKVSYARP 98
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 31 RPQAE--PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYAT 88
RP +E NL++SGL + T + + D FS FG +++++++ + +G S+G F+++
Sbjct: 97 RPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDK 156
Query: 89 LEAAGKAIEGMDG 101
A +AI +G
Sbjct: 157 RSEAEEAITSFNG 169
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
+F+ L + + L F FG V + K+++ + KGFGFV E A AI +
Sbjct: 246 IFIYNLGQDAHEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 100 DGKFLDGWVIFVEY 113
+G L ++ V +
Sbjct: 306 NGYRLGDKILQVSF 319
>gi|255930353|ref|XP_002556736.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581349|emb|CAP79122.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 140
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
LF+ GLS T D +LR F FG V A +VK R++G S+GFGFV+++T + A A+ M
Sbjct: 4 LFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDDEATAAMNAM 63
Query: 100 DGKFLDGWVIFVEYAKPR 117
+ + DG I V+ A R
Sbjct: 64 NNQEFDGRQIRVDKATER 81
>gi|457760|emb|CAA54951.1| ribosomal protein S19 [Arabidopsis thaliana]
gi|459422|emb|CAA54965.1| mitochondrial ribosomal protein S19, nuclear encoded [Arabidopsis
thaliana]
Length = 212
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 37 STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAI 96
ST L++ GLS T + +L+D FS+F V A+++ ++ +G S+G+GFV + + ++A AI
Sbjct: 30 STKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAI 89
Query: 97 EGMDGKFLDGWVIFVEYAKPRQPPTLP 123
M+G+ L+G+ I V AK P+LP
Sbjct: 90 SAMNGQELNGFNISVNVAK--DWPSLP 114
>gi|6137350|pdb|1CVJ|A Chain A, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137351|pdb|1CVJ|B Chain B, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137352|pdb|1CVJ|C Chain C, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137353|pdb|1CVJ|D Chain D, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137354|pdb|1CVJ|E Chain E, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137355|pdb|1CVJ|F Chain F, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137356|pdb|1CVJ|G Chain G, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137357|pdb|1CVJ|H Chain H, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
Length = 190
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 11/118 (9%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQR---PQAEPST------NLFVSGLSKRTTDETLRDTFSA 60
P R T F P R Q +PS N+F+ L K ++ L DTFSA
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSA 121
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
FG ++ K+V E+G SKG+GFV + T EAA +AIE M+G L+ +FV K R+
Sbjct: 122 FGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK 177
>gi|119612222|gb|EAW91816.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
gi|119612227|gb|EAW91821.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
Length = 419
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 11/118 (9%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQR---PQAEPST------NLFVSGLSKRTTDETLRDTFSA 60
P R T F P R Q +PS N+F+ L K ++ L DTFSA
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSA 121
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
FG ++ K+V E+G SKG+GFV + T EAA +AIE M+G L+ +FV K R+
Sbjct: 122 FGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK 177
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A
Sbjct: 186 RAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA++ M+GK L+G I+V A+ +
Sbjct: 245 QKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|431930897|ref|YP_007243943.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
gi|431829200|gb|AGA90313.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
Length = 90
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V L D LR+TFS FGEV ++ R +G SKGFGFV+ ++ A AI+G
Sbjct: 2 NIYVGNLPYNVKDADLRETFSRFGEVSQVTVIMDRLTGESKGFGFVEMSSNSQADAAIKG 61
Query: 99 MDGKFLDGWVIFVEYAKPRQPPT 121
++G L+G I V AKP+ +
Sbjct: 62 LNGTDLNGRNITVNQAKPKSDSS 84
>gi|427382637|ref|ZP_18879357.1| hypothetical protein HMPREF9447_00390 [Bacteroides oleiciplenus YIT
12058]
gi|425729882|gb|EKU92733.1| hypothetical protein HMPREF9447_00390 [Bacteroides oleiciplenus YIT
12058]
Length = 130
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N++V+ LS T ++L++ F+ +GEV A I+ RE+G S+GFGFV+ E KAI+G
Sbjct: 2 NIYVANLSWNTNSDSLQELFTQYGEVTSAYIINDRETGRSRGFGFVEMPNDEDGQKAIDG 61
Query: 99 MDGKFLDGWVIFVEYAKPR 117
++ +G I V A+PR
Sbjct: 62 LNETDFEGKTIAVSVARPR 80
>gi|395512247|ref|XP_003760354.1| PREDICTED: polyadenylate-binding protein 1 [Sarcophilus harrisii]
Length = 654
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 120 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 177
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 178 MNGMLLNDRKVFVGRFKSRK 197
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L++ F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 211 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 269
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G I+V A+ +
Sbjct: 270 EMNGKELNGKQIYVGRAQKK 289
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 314 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 371
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 372 EMNGRIVATKPLYVALAQRKE 392
>gi|37681851|gb|AAQ97803.1| poly(A)-binding protein, cytoplasmic 1 [Danio rerio]
Length = 620
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ + + ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNMDESIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAANRAIET 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV + K R+
Sbjct: 158 MNGMLLNDRKVFVGHFKSRK 177
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R Q NL+V L DE LR F+ +G + AK++ + G+S+GFGFV +++
Sbjct: 286 ERIQRYQGVNLYVKNLDDSIDDEKLRKEFAPYGTITSAKVMT--DGGHSRGFGFVCFSSP 343
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
E A KA+ M+G+ + ++V A+ ++
Sbjct: 344 EEATKAVTEMNGRIVSTKPLYVALAQRKE 372
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + E L++ F+ FG+ + ++ E G S+GFGFV + A +A+
Sbjct: 191 TNVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTD-ERGRSRGFGFVNFVNHGDARRAVT 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G V++V A+ R
Sbjct: 250 EMNGKELNGRVLYVGRAQKR 269
>gi|307110375|gb|EFN58611.1| hypothetical protein CHLNCDRAFT_10145, partial [Chlorella
variabilis]
Length = 329
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYAT 88
R A+ NLF+ GL ++ L DTFSAFG +V+ KI++ ++G +KGFGF+ + +
Sbjct: 101 DRNTADVGANLFIGGLDPEVDEKLLYDTFSAFGVIVNNPKIMRDPDTGLTKGFGFLSFDS 160
Query: 89 LEAAGKAIEGMDGKFLDGWVIFVEYA 114
EA+ A+E M+G++L + + YA
Sbjct: 161 FEASDAALEAMNGQYLMNRPLSISYA 186
>gi|83032218|gb|ABB97027.1| unknown [Brassica rapa]
Length = 208
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 18 STSPFSSSLNPPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGY 77
+++ ++S + Q + S+ +FV G+S T + LR+ FS +GEVV AKI+ RE+G
Sbjct: 14 TSAHVTASNSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGR 73
Query: 78 SKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYA 114
S+GF FV + + E A A++ +DG+ L G I V YA
Sbjct: 74 SRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYA 109
>gi|383417509|gb|AFH31968.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 456
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 291 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 348
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 349 EMNGRIVATKPLYVALAQRKE 369
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE L+D F G + K++ ESG SKGFGFV + E A
Sbjct: 186 RAKEFTNVYIKNFGEDMDDERLKDLF---GPALSVKVMTD-ESGKSKGFGFVSFERHEDA 241
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA++ M+GK L+G I+V A+ +
Sbjct: 242 QKAVDEMNGKELNGKQIYVGRAQKK 266
>gi|326532684|dbj|BAJ89187.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 126
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 46/77 (59%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P NLFV+GLS R TD L FS GEV+ A IV + S+GFGFV A L+ A +
Sbjct: 42 PGNNLFVTGLSSRLTDRDLEKHFSTEGEVIDASIVLDPWTRESRGFGFVTMANLKEAERC 101
Query: 96 IEGMDGKFLDGWVIFVE 112
I+ +D L+G VI VE
Sbjct: 102 IKYLDSSVLEGRVITVE 118
>gi|429859146|gb|ELA33937.1| polyadenylate-binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 688
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V ++ TD+ RD F+AFG+V + + + +E G S+GFGFV + T EAA KA+E
Sbjct: 215 TNVYVKNIANEVTDDEFRDLFAAFGDVTSSSLARDQE-GKSRGFGFVNFTTHEAAAKAVE 273
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
++ K G ++V A+ +
Sbjct: 274 DLNNKDFRGQDLYVGRAQKKH 294
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L ++ L DTF+AFG ++ K+ + E+G SKG+GFV Y T EAA +AI+
Sbjct: 123 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAAAQAIKH 181
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+ ++V + P++
Sbjct: 182 VNGMLLNEKKVYVGHHIPKK 201
>gi|383862671|ref|XP_003706807.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3
[Megachile rotundata]
Length = 601
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ + DTFSAFG ++ K+ + ESG SKG+GFV + T EAA K+I+
Sbjct: 100 NVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQD-ESGVSKGYGFVHFETEEAANKSIDK 158
Query: 99 MDGKFLDGWVIFVE 112
++G L+G F E
Sbjct: 159 VNGMLLNGKKNFGE 172
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR F+ FG + AK++ E G SKGFGFV ++ E A KA+
Sbjct: 267 VNLYVKNLDDSINDERLRREFAPFGTITSAKVM--MEDGRSKGFGFVCFSAPEEATKAVT 324
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 325 EMNGRIIVTKPLYVALAQRKE 345
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 50 TDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFL-DGWV 108
TD+ L++ F +G + K++ ++ G S+GFGFV + +AA +A+ ++GK + +G
Sbjct: 175 TDDKLKEMFEKYGTITSHKVM-IKDDGKSRGFGFVAFEDPDAAEQAVLELNGKEVAEGKC 233
Query: 109 IFVEYAKPR 117
++V A+ +
Sbjct: 234 MYVGRAQKK 242
>gi|171056877|ref|YP_001789226.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
gi|170774322|gb|ACB32461.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
Length = 157
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
L+V L+ DE L + FS FG V AK++ RE+G SKGFGFV+ + A AI G+
Sbjct: 5 LYVGNLAYSVRDEDLNEAFSQFGAVNSAKVMMDRETGRSKGFGFVEMGSDPEAQAAINGL 64
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
+G+ + G I V A+PR+
Sbjct: 65 NGQAIGGRAIVVNEARPRE 83
>gi|356503807|ref|XP_003520694.1| PREDICTED: LOW QUALITY PROTEIN: glycine-rich RNA-binding protein 2,
mitochondrial-like [Glycine max]
Length = 148
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAK--IVKHRESGYSKGFGFVKYATLE 90
+ S+ LF+ GLS D++L+D S FG VV K ++ +RESG +GFGFV ++ E
Sbjct: 30 RCMSSSKLFIGGLSYGVDDQSLKDASSGFGYVVDGKTKVITNRESGRXRGFGFVNFSNDE 89
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAK 115
+A + MDGK L+G I V YA
Sbjct: 90 SASSTLSTMDGKDLNGPSIRVYYAN 114
>gi|332029758|gb|EGI69627.1| ELAV-like protein 2 [Acromyrmex echinatior]
Length = 359
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
Q Q E TNL V+ L + T + +R FS+ GEV K+++ + SG S G+GFV Y
Sbjct: 20 QTSQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSLGYGFVNYHRP 79
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKP 116
E A KAI ++G L I V YA+P
Sbjct: 80 EDAEKAINTLNGLRLQNKTIKVSYARP 106
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 31 RPQAEP--STNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYAT 88
RP +E NL+VSGL K + L + FS +G ++ ++I+ +G SKG GF+++
Sbjct: 105 RPSSEAIKGANLYVSGLPKNMAQQDLENLFSPYGRIITSRILCDNITGLSKGVGFIRFDQ 164
Query: 89 LEAAGKAIEGMDGKFLDGWV--IFVEYAKPRQPPTLPSQNN 127
A +AI+ ++G G I V++A PS NN
Sbjct: 165 RVEAERAIQELNGTIPKGSSEPITVKFANN------PSNNN 199
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 4 RAAVAAPRGLRRLFSTSPFSSSLNP----PQRPQAEPSTNLFVSGLSKRTTDETLRDTFS 59
+A +A +GL+R SP + L P +FV L+ T + L F
Sbjct: 241 KAMLAINKGLQRY---SPLAGDLLANSMLPGNTMNGAGWCIFVYNLAPETEENVLWQLFG 297
Query: 60 AFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEY 113
FG V K+++ ++ KGFGFV E A AI+ ++G L V+ V +
Sbjct: 298 PFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSLNGYTLGNRVLQVSF 351
>gi|298528161|ref|ZP_07015565.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511813|gb|EFI35715.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL+V L TT+ LRD F+ +GEV AKI++ RE+G S+GFGFV+ A +AIE
Sbjct: 2 TNLYVGNLPWSTTEAQLRDLFAEYGEVSSAKIIEDRETGRSRGFGFVEMEN--GADEAIE 59
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
++G G I V AKP++
Sbjct: 60 SLNGTDFGGRNIKVNVAKPKR 80
>gi|41054151|ref|NP_956133.1| polyadenylate-binding protein 1-like [Danio rerio]
gi|27881953|gb|AAH44513.1| Zgc:55855 [Danio rerio]
gi|182890236|gb|AAI65470.1| Zgc:55855 protein [Danio rerio]
Length = 620
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ + + ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNMDESIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAANRAIET 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV + K R+
Sbjct: 158 MNGMLLNDRKVFVGHFKSRK 177
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R Q NL+V L DE LR F+ +G + AK++ + G+S+GFGFV +++
Sbjct: 286 ERIQRYQGVNLYVKNLDDSIDDEKLRKEFAPYGTITSAKVMT--DGGHSRGFGFVCFSSP 343
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
E A KA+ M+G+ + ++V A+ ++
Sbjct: 344 EEATKAVTEMNGRIVSTKPLYVALAQRKE 372
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + E L++ F+ FG+ + ++ E G S+GFGFV + A +A+
Sbjct: 191 TNVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTD-ERGRSRGFGFVNFVNHGDARRAVT 249
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
M+GK L+G V++V A+ R
Sbjct: 250 EMNGKELNGRVLYVGRAQKR 269
>gi|403305068|ref|XP_003943097.1| PREDICTED: polyadenylate-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 803
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 267 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 324
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 325 MNGMLLNDRKVFVGRFKSRK 344
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A KA++
Sbjct: 358 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD 416
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+GK L+G I+V A+
Sbjct: 417 EMNGKELNGKQIYVGRAQ 434
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 461 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 518
Query: 98 GMDGKFLDGWVIFVEYAK 115
M+G+ + ++V A+
Sbjct: 519 EMNGRIVATKPLYVALAQ 536
>gi|156387980|ref|XP_001634480.1| predicted protein [Nematostella vectensis]
gi|156221563|gb|EDO42417.1| predicted protein [Nematostella vectensis]
Length = 380
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NLF+ L ++ L DTFSAFG ++ KI++ ++G SKGF F+ +A+ +A+ AIE
Sbjct: 101 NLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIE 160
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G++L I V YA
Sbjct: 161 AMNGQYLCNRPITVSYA 177
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
++V GL ++ ++ + + F G VV+ + K R + +G+GFV++ E A AI+ M
Sbjct: 15 IYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVM 74
Query: 100 D 100
+
Sbjct: 75 N 75
>gi|291084655|ref|NP_001108206.2| polyadenylate-binding protein 4-like [Homo sapiens]
Length = 428
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLE 90
R +A TN+++ DE L+D FS +G+ + K++ SG SKGFGFV + + E
Sbjct: 241 RSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHE 299
Query: 91 AAGKAIEGMDGKFLDGWVIFVEYAKPR 117
AA KA+E M+G+ ++G +IFV A+ +
Sbjct: 300 AAKKAVEEMNGRDINGQLIFVGRAQKK 326
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++TL + FSAFG+++ +K++ + SKG+ FV + AA +AIE
Sbjct: 157 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEE 214
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+GK L G +FV K R+
Sbjct: 215 MNGKLLKGCKVFVGRFKNRK 234
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 30 QRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATL 89
+R + L++ L DE LR+ FS+FG + K+++ E G SKGFG + +++
Sbjct: 343 ERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQ--EEGQSKGFGLICFSSP 400
Query: 90 EAAGKAIEGMDGKFL 104
E A KA+ M+G+ L
Sbjct: 401 EDATKAMTEMNGRIL 415
>gi|355709043|gb|AES03462.1| poly binding protein, cytoplasmic 1 [Mustela putorius furo]
Length = 230
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 11/118 (9%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQR---PQAEPST------NLFVSGLSKRTTDETLRDTFSA 60
P R T F P R Q +PS N+F+ L K ++ L DTFSA
Sbjct: 36 PADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSA 95
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQ 118
FG ++ K+V E+G SKG+GFV + T EAA +AIE M+G L+ +FV K R+
Sbjct: 96 FGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK 151
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A
Sbjct: 160 RAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDA 218
Query: 93 GKAIEGMDGKFL 104
KA++ M+GK L
Sbjct: 219 QKAVDEMNGKEL 230
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%)
Query: 32 PQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEA 91
P + +L V +S RTT L F +GEVV I ++R +G+S+GF FV++ E
Sbjct: 21 PDISGTYSLLVLNISFRTTPNDLTPLFDKYGEVVDCYIPRNRRNGHSRGFAFVRFRKEED 80
Query: 92 AGKAIEGMDGKFLDGWVIFVEYAK 115
A KA+E MDG+ +DG I V++AK
Sbjct: 81 ARKAMEEMDGREVDGRSITVQFAK 104
>gi|403417817|emb|CCM04517.1| predicted protein [Fibroporia radiculosa]
Length = 325
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 31 RPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEV-VHAKIVKHRESGYSKGFGFVKYATL 89
+ Q + NLF+ L + + L DTFSAFG + AKI + SG SKG+GFV +
Sbjct: 92 KKQLDVGANLFIGNLDENVDERLLYDTFSAFGVMATTAKIARDPGSGKSKGYGFVSFTDF 151
Query: 90 EAAGKAIEGMDGKFLDGWVIFVEYA 114
E++ AIE M+G+FL I V+YA
Sbjct: 152 ESSDAAIESMNGQFLMNKAITVQYA 176
>gi|196008415|ref|XP_002114073.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
gi|190583092|gb|EDV23163.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
Length = 622
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 10 PRGLRRLFSTSPFSSSLNPPQR---PQAEPST------NLFVSGLSKRTTDETLRDTFSA 60
P R T F P R Q +PS N+F+ L K ++ + DTFSA
Sbjct: 70 PNDAERALDTLNFDPVNGKPCRIMWSQRDPSLRRSGVGNIFIKNLEKDIDNKAIYDTFSA 129
Query: 61 FGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFV 111
FG ++ KI E+G SKG+ FV + T EAA +AIE ++G L G +FV
Sbjct: 130 FGNILSCKIALD-ENGNSKGYAFVHFETQEAANRAIEKVNGMLLSGKKVFV 179
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TNL+V +D+ RD F G++V +V +SG S+GFGFV Y T EAA KA+E
Sbjct: 200 TNLYVKNFRDDISDDEFRDLFEQCGKIVSC-VVMRDDSGKSRGFGFVSYETHEAAQKAVE 258
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
++ K D ++V A+ +
Sbjct: 259 TLNEKEFDLRRMYVARAQKK 278
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L D LR F+ FG + AK++ E G S+GFGFV +++ E A KA+
Sbjct: 303 VNLYVKNLDDVIDDAKLRQEFANFGTITSAKVMSD-EKGISRGFGFVCFSSPEEATKAVT 361
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 362 EMNGRIIISKPLYVALAQRKE 382
>gi|225463887|ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256416 isoform 1 [Vitis
vinifera]
gi|359493015|ref|XP_003634493.1| PREDICTED: uncharacterized protein LOC100256416 isoform 2 [Vitis
vinifera]
Length = 207
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
F+ GLS T+D +L++ F FG +V AK+V + SG S+GFGFV + +A AI+ M
Sbjct: 9 CFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAIKEM 68
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
G LDG I V+ A+P Q
Sbjct: 69 HGMDLDGRSITVDKAQPNQ 87
>gi|358337762|dbj|GAA56093.1| splicing factor 3B subunit 4 [Clonorchis sinensis]
Length = 363
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHA-KIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
N+F+ L ++ L DTFSAFG ++ KI++ E+G SKG+ F+ +A+ EA+ AIE
Sbjct: 101 NIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGYAFINFASFEASDAAIE 160
Query: 98 GMDGKFLDGWVIFVEYA 114
M+G++L I + YA
Sbjct: 161 AMNGQYLCNRAITISYA 177
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 40 LFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGM 99
++V GL ++TT+ L + F G VV+ + K R + +G+GFV++ T E A A+ M
Sbjct: 15 IYVGGLDEKTTESILWELFLQAGPVVNVHMPKDRITMQHQGYGFVEFMTEEDADYAMRIM 74
Query: 100 DGKFLDGWVIFVEYAKPRQ 118
+ L G I V A Q
Sbjct: 75 NMIKLFGKPIRVNKASANQ 93
>gi|449297589|gb|EMC93607.1| hypothetical protein BAUCODRAFT_76311, partial [Baudoinia
compniacensis UAMH 10762]
Length = 253
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 6/90 (6%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+ LFV GLS +E L F FGE+ +I+ RE+G SKGFGFV++ +++ A KA+E
Sbjct: 1 STLFVGGLSWNVDEEWLMREFEEFGELASTRIMTDRETGKSKGFGFVEFKSVDGAIKAVE 60
Query: 98 GMDGKFLDGWVIFVEYAKPRQPPTLPSQNN 127
G G +DG + +++ + R SQNN
Sbjct: 61 GKQGGEIDGRNVRLDFTEGR------SQNN 84
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%)
Query: 35 EPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGK 94
EPS+ LFV +S ++ + + FS +G + ++ R++G KGFG+V+ +++ A
Sbjct: 105 EPSSTLFVGNVSFDANEDMVTEVFSEYGSIKAVRLPTDRDTGALKGFGYVEMFSIDDAKV 164
Query: 95 AIEGMDGKFLDGWVIFVEYAKPR 117
A E + G + G I ++Y+ P+
Sbjct: 165 AFEALQGAEIAGRSIRLDYSTPK 187
>gi|383417507|gb|AFH31967.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|383417511|gb|AFH31969.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 459
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L K ++ L DTFSAFG ++ K+V E+G SKG+GFV + T EAA +AIE
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEK 157
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
M+G L+ +FV K R+
Sbjct: 158 MNGMLLNDRKVFVGRFKSRK 177
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 33 QAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAA 92
+A+ TN+++ + DE L+D F FG + K++ ESG SKGFGFV + E A
Sbjct: 186 RAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDA 244
Query: 93 GKAIEGMDGKFLDGWVIFVEYAKPR 117
KA++ M+GK L+G I+V A+ +
Sbjct: 245 QKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
NL+V L DE LR FS FG + AK++ E G SKGFGFV +++ E A KA+
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVT 351
Query: 98 GMDGKFLDGWVIFVEYAKPRQ 118
M+G+ + ++V A+ ++
Sbjct: 352 EMNGRIVATKPLYVALAQRKE 372
>gi|171693991|ref|XP_001911920.1| hypothetical protein [Podospora anserina S mat+]
gi|170946944|emb|CAP73748.1| unnamed protein product [Podospora anserina S mat+]
Length = 342
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%)
Query: 36 PSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKA 95
P +NLFV+G+ R + + F +GEV +I+K ++G S+GFGFVK T E A A
Sbjct: 70 PGSNLFVTGIHPRLEEAEVTRLFEKYGEVEKCQIMKDPQTGESRGFGFVKMVTSEMAEAA 129
Query: 96 IEGMDGKFLDGWVIFVEYAKPRQPPT 121
I+G+ G+ ++G + +E A+ +P T
Sbjct: 130 IDGLRGEVIEGRTLSIEKARRARPRT 155
>gi|154322853|ref|XP_001560741.1| hypothetical protein BC1G_00769 [Botryotinia fuckeliana B05.10]
gi|347837080|emb|CCD51652.1| similar to polyadenylate-binding protein [Botryotinia fuckeliana]
Length = 790
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+F+ L ++ L DTF+AFG ++ K+ + ESG SKG+GFV Y T EAA +AI+
Sbjct: 150 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ESGASKGYGFVHYETDEAAAQAIKH 208
Query: 99 MDGKFLDGWVIFVEYAKPRQ 118
++G L+ +FV + P++
Sbjct: 209 VNGMLLNEKKVFVGHHIPKK 228
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
TN++V + T+E R+ F FG+V A + + E+G S+GFGFV + E A A++
Sbjct: 242 TNIYVKNIPVEATEEEFRELFEKFGDVTSASLARDAETGKSRGFGFVNFINHEHAATAVD 301
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
++GK G ++V A+ +
Sbjct: 302 ELNGKDFKGQDLYVGRAQKK 321
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 28 PPQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYA 87
P P + S +L+V L T+ L + FS G V ++ + S S G+ +V Y
Sbjct: 51 PTNAPHPQASASLYVGELDTSVTEAMLFELFSQIGSVASIRVCRDAISRRSLGYAYVNYN 110
Query: 88 TLEAAGKAIEGMDGKFLDG 106
T KA+E ++ + G
Sbjct: 111 TTADGEKALEELNYTLIKG 129
>gi|145506438|ref|XP_001439180.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406363|emb|CAK71783.1| unnamed protein product [Paramecium tetraurelia]
Length = 386
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 5 AAVAAPRGLRRLFSTSPFSSSLNP-PQRPQAEPSTNLFVSGLSKRTTDETLRDTFSAFGE 63
+ + +P G + + + + + L + P NLFV L D L D FS++G
Sbjct: 248 SIIYSPDGSKEIITKEKYLNDLATFNSKKTGPPGANLFVFHLPNEHKDSDLMDLFSSYGN 307
Query: 64 VVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEGMDGKFLDGWVIFVEYAKPRQPPTLP 123
V+ A+++ ++G SKGFGFV + E+A KA E MDG +D + V + + P P
Sbjct: 308 VISARVMTDPKTGKSKGFGFVSFDKQESAQKAKEAMDGHLIDKKKLSVTFKQGDGTPCQP 367
Query: 124 SQ 125
Q
Sbjct: 368 LQ 369
>gi|380696527|ref|ZP_09861386.1| RNA-binding protein rbpA [Bacteroides faecis MAJ27]
Length = 100
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%)
Query: 39 NLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIEG 98
N+++SGLS T D L + F+ FGEV AK++ RE+G S+GF FV+ A KAI+
Sbjct: 2 NIYISGLSYGTNDADLTNLFAEFGEVSSAKVIFDRETGRSRGFAFVEMANDAEGQKAIDE 61
Query: 99 MDGKFLDGWVIFVEYAKPR 117
++G D VI V A+PR
Sbjct: 62 LNGVEYDQKVISVSVARPR 80
>gi|261330753|emb|CBH13738.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 666
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%)
Query: 38 TNLFVSGLSKRTTDETLRDTFSAFGEVVHAKIVKHRESGYSKGFGFVKYATLEAAGKAIE 97
+NLF+SGL TD L + FS FG + AK++ +G S+G FVK+ L A +A+E
Sbjct: 272 SNLFISGLRHSVTDSGLHELFSPFGSIESAKVMLDIHTGRSRGIAFVKFVRLCDAQRAVE 331
Query: 98 GMDGKFLDGWVIFVEYAKPR 117
++G G I V AKP
Sbjct: 332 ALNGSIFCGETITVRVAKPN 351
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,309,312,218
Number of Sequences: 23463169
Number of extensions: 91335385
Number of successful extensions: 273909
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17638
Number of HSP's successfully gapped in prelim test: 6818
Number of HSP's that attempted gapping in prelim test: 232998
Number of HSP's gapped (non-prelim): 40080
length of query: 135
length of database: 8,064,228,071
effective HSP length: 100
effective length of query: 35
effective length of database: 10,012,878,467
effective search space: 350450746345
effective search space used: 350450746345
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)