Citrus Sinensis ID: 032711

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-----
Protein Sequence
MSRETVEGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHFIMQS
Secondary Structure (PSIPRED)
cccHHccccccccccccccccccccccHHHcccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHccccccccccccccHHHHHHHHHHccccccccccHHHHHccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHccccccccccccHHHHcccccccccHcHHHHHHHHHHHHHccccccccccccEEEEEccccccccccccccHHHHHHHHHHHcccHcccccHHHHHccHHHHccccccccccHHHHHHHcc
Coil and Loop (DISEMBL)
MSRETVEGLGNALRRKWHVSRWNSLTDQvvnsknggyglpadiwSVGCTVLEmltrcrpyfGVEWVQALFKIArgelppipdsvsrDARDFILKCLqvnpndrptaaqlmehpfvkrplptswglptphhfimqs
Flexible Loop (DISEMBL)
msretveglgnalrrkwhvsrwNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARgelppipdsVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKrplptswglptphhfimqs
Low Complexity Region (SEG)
MSRETVEGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHFIMQS
Disordered region (IsUnstruct)
*********GNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN**************FV*******WG***********
Disordered Region (DISOPRED)
***ET*E*********WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF*********************
Disordered Region (DISEMBL)
**********NALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHFIMQS
Disordered Region (DISPRO)
*****VEGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHFIMQS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSRETVEGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHFIMQS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	135	2.2.26 [Sep-21-2011]
Q39008	608	Mitogen-activated protein	yes	no	0.688	0.152	0.659	2e-30
Q9SZ67	1895	Probable WRKY transcripti	no	no	0.770	0.054	0.584	2e-28
Q9FZ36	651	Mitogen-activated protein	no	no	0.592	0.122	0.536	1e-18
O22040	666	Mitogen-activated protein	no	no	0.592	0.120	0.548	5e-18
Q54XJ4	1495	Probable serine/threonine	yes	no	0.6	0.054	0.444	5e-17
Q9Y6R4	1608	Mitogen-activated protein	yes	no	0.651	0.054	0.438	2e-16
Q56UN5	1328	Mitogen-activated protein	no	no	0.674	0.068	0.421	5e-16
Q01389	1478	Serine/threonine-protein	yes	no	0.659	0.060	0.421	1e-15
Q10407	1116	MAP kinase kinase kinase	yes	no	0.681	0.082	0.412	1e-15
O08648	1597	Mitogen-activated protein	yes	no	0.651	0.055	0.426	1e-15

>sp|Q39008|M3K1_ARATH Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2

 Score =  131 bits (329), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/94 (65%), Positives = 76/94 (80%), Gaps = 1/94 (1%)

Query: 28  QVVNSKNG-GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSR 86
           +V+N K+  GYG PADIWS+GCTVLEM T   PY  +E VQALF+I RG LP +PD++S 
Sbjct: 499 EVINRKDSDGYGSPADIWSLGCTVLEMCTGQIPYSDLEPVQALFRIGRGTLPEVPDTLSL 558

Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 120
           DAR FILKCL+VNP +RPTAA+L+ HPFV+RPLP
Sbjct: 559 DARLFILKCLKVNPEERPTAAELLNHPFVRRPLP 592

Involved in the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6) downstream of bacterial flagellin receptor FLS2. May be involved in the cold and salinity stress-mediated MAP kinase signaling cascade (MEKK1, MEK1/MKK2 and MPK4/MPK6). Activates downstream MKK2, MKK4 and MKK5.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 5

>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/106 (58%), Positives = 75/106 (70%), Gaps = 2/106 (1%)

Query: 17   WHVSRWNSLTDQVV-NSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR 74
            W    WN +  +V+ N K+  GYG PADIWS+GCTVLEMLT   PY  +E   AL+ I  
Sbjct: 1777 WRTPYWNWMAPEVILNPKDYDGYGTPADIWSLGCTVLEMLTGQIPYSDLEIGTALYNIGT 1836

Query: 75   GELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 120
            G+LP IPD +S DARDFIL CL+VNP +RPTAA+L+ HPFV  PLP
Sbjct: 1837 GKLPKIPDILSLDARDFILTCLKVNPEERPTAAELLNHPFVNMPLP 1882

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. May act also as a disease resistance protein with a serine/threonine-protein kinase activity.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FZ36|M3K2_ARATH Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 2/82 (2%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG-VEWVQALFKIARGEL-PPIPDSVSRDARDFIL 93
           G+   ADIWSVGCTV+EM+T   P+    + + A+F I   +  PPIPD++S DA DF+L
Sbjct: 249 GHSFSADIWSVGCTVIEMVTGKAPWSQQYKEIAAIFHIGTTKSHPPIPDNISSDANDFLL 308

Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
           KCLQ  PN RPTA++L++HPFV
Sbjct: 309 KCLQQEPNLRPTASELLKHPFV 330

Involved in cortical microtubules organization and stabilization by regulating the phosphorylation state of microtubule-associated proteins such as MAP65-1.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|O22040|ANP1_ARATH Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2

 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/82 (54%), Positives = 60/82 (73%), Gaps = 2/82 (2%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG-VEWVQALFKIARGEL-PPIPDSVSRDARDFIL 93
           G+   ADIWSVGCTV+EM+T   P+    + V A+F I   +  PPIPD++S DA+DF+L
Sbjct: 250 GHSFSADIWSVGCTVIEMVTGKAPWSQQYKEVAAIFFIGTTKSHPPIPDTLSSDAKDFLL 309

Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
           KCLQ  PN RPTA++L++HPFV
Sbjct: 310 KCLQEVPNLRPTASELLKHPFV 331

May be involved in an oxidative stress-mediated signaling cascade that phosphorylates downstream MAP kinases MPK3 and MPK6. May suppress auxin signaling that promotes cell cycle. Functionally redundant to ANP2 and ANP3 in the positive regulation of cytokinesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q54XJ4|Y8901_DICDI Probable serine/threonine-protein kinase DDB_G0278901 OS=Dictyostelium discoideum GN=DDB_G0278901 PE=3 SV=1

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/81 (44%), Positives = 53/81 (65%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           G     D+WS+GCT++E+LT   PYFG+    AL+KI + + PPIP  +S   +DF+L C
Sbjct: 200 GISTACDVWSLGCTIIELLTGTPPYFGLAPAAALYKIVQEDHPPIPPGISAALKDFLLNC 259

Query: 96  LQVNPNDRPTAAQLMEHPFVK 116
            + + N R +A QL+ HP+VK
Sbjct: 260 FKKDENIRSSAKQLLHHPWVK 280

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9Y6R4|M3K4_HUMAN Mitogen-activated protein kinase kinase kinase 4 OS=Homo sapiens GN=MAP3K4 PE=1 SV=2

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 1/89 (1%)

Query: 29   VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIARGELPPIPDSVSRD 87
            +  +K  G+G  ADIWS+GC V+EM+T  RP+   E   Q ++K+  G  PPIP+ +S +
Sbjct: 1514 ITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHKPPIPERLSPE 1573

Query: 88   ARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
             +DF+  CL+ +P  R TA+QL++H FVK
Sbjct: 1574 GKDFLSHCLESDPKMRWTASQLLDHSFVK 1602

Component of a protein kinase signal transduction cascade. Activates the CSBP2, P38 and JNK MAPK pathways, but not the ERK pathway. Specifically phosphorylates and activates MAP2K4 and MAP2K6.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q56UN5|M3K19_HUMAN Mitogen-activated protein kinase kinase kinase 19 OS=Homo sapiens GN=MAP3K19 PE=2 SV=1

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/95 (42%), Positives = 61/95 (64%), Gaps = 4/95 (4%)

Query: 25   LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA--RGELPPIPD 82
            +  +V+N    GYG  +DIWS+GCTV EM T   P   ++ + A+F I   RG +PP+PD
Sbjct: 1234 MAPEVINES--GYGRKSDIWSIGCTVFEMATGKPPLASMDRMAAMFYIGAHRGLMPPLPD 1291

Query: 83   SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
              S +A DF+  CL  + ++RP+A QL++H F++R
Sbjct: 1292 HFSENAADFVRMCLTRDQHERPSALQLLKHSFLER 1326

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q01389|BCK1_YEAST Serine/threonine-protein kinase BCK1/SLK1/SSP31 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BCK1 PE=1 SV=1

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 6/95 (6%)

Query: 25   LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE-LPPIPDS 83
            +  ++V++K G Y    DIWS+GC VLEM    RP+  +E V A+FKI + +  PPIP+ 
Sbjct: 1346 MAPEMVDTKQG-YSAKVDIWSLGCIVLEMFAGKRPWSNLEVVAAMFKIGKSKSAPPIPED 1404

Query: 84   ----VSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
                +S+  R+F+  C ++NP  RPTA +L+ HPF
Sbjct: 1405 TLPLISQIGRNFLDACFEINPEKRPTANELLSHPF 1439

Serine/threonine protein kinase involved in a signal transduction pathway that play a role in yeast cell morphogenesis and cell growth. This pathway seems to starts by SMP3; then involve the kinase PKC1 that may act on this kinase. BCK1 probably phosphorylates MKK1 and MKK2 which themselves phosphorylate the MPK1 kinase.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q10407|MKH1_SCHPO MAP kinase kinase kinase mkh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mkh1 PE=3 SV=1

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 5/97 (5%)

Query: 25   LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA-RGELPPIP-- 81
            +  +V+++ + GY    D+WS+GC VLEML   RP+   E +QA+FK+    + PPIP  
Sbjct: 999  MAPEVIHNDHQGYSAKVDVWSLGCVVLEMLAGRRPWSTDEAIQAMFKLGTEKKAPPIPSE 1058

Query: 82   --DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
                VS +A  F+  C  VN + RPTA +L+ HPF+K
Sbjct: 1059 LVSQVSPEAIQFLNACFTVNADVRPTAEELLNHPFMK 1095

May regulate cell morphology, cell wall integrity, salt resistance, cell cycle reentry from stationary-phase arrest, and filamentous growth in response to stress. Activates the MAP kinase kinase skh1/pek1 by phosphorylation.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

>sp|O08648|M3K4_MOUSE Mitogen-activated protein kinase kinase kinase 4 OS=Mus musculus GN=Map3k4 PE=1 SV=2

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 29   VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIARGELPPIPDSVSRD 87
            +  +K  G+G  ADIWS+GC V+EM+T  RP+   E   Q ++K+  G  PPIP+ +S +
Sbjct: 1503 ITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHKPPIPERLSPE 1562

Query: 88   ARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
             + F+  CL+ +P  R TA+QL++H FVK
Sbjct: 1563 GKAFLSHCLESDPKIRWTASQLLDHAFVK 1591

Component of a protein kinase signal transduction cascade. Activates the CSBP2, P38 and JNK MAPK pathways, but not the ERK pathway. Specifically phosphorylates and activates MAP2K4 and MAP2K6.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	135
356509460	566	PREDICTED: mitogen-activated protein kin	0.755	0.180	0.696	6e-36
224082218	548	predicted protein [Populus trichocarpa]	0.755	0.186	0.705	7e-36
255545546	555	Mitogen-activated protein kinase kinase	0.762	0.185	0.679	3e-35
224066881	558	predicted protein [Populus trichocarpa]	0.755	0.182	0.686	4e-35
302141878	273	unnamed protein product [Vitis vinifera]	0.748	0.369	0.702	3e-34
225459451	567	PREDICTED: mitogen-activated protein kin	0.748	0.178	0.702	4e-34
356518515	555	PREDICTED: mitogen-activated protein kin	0.755	0.183	0.666	2e-33
359486016	559	PREDICTED: mitogen-activated protein kin	0.748	0.180	0.673	3e-33
356557517	440	PREDICTED: mitogen-activated protein kin	0.681	0.209	0.728	4e-33
298204644	719	unnamed protein product [Vitis vinifera]	0.748	0.140	0.673	5e-33

>gi|356509460|ref|XP_003523467.1| PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Glycine max]

 Score =  155 bits (391), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 71/102 (69%), Positives = 83/102 (81%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD 87
           +VV  KN GYGLPAD+WS+GCTVLEMLT   PY  +E +QALF+I +GE PPIPDS+SRD
Sbjct: 459 EVVKGKNKGYGLPADMWSLGCTVLEMLTGQLPYRDLECMQALFRIGKGERPPIPDSLSRD 518

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPH 129
           A+DFIL+CLQVNPNDRPTAAQL+ H FV+RPL  S G   PH
Sbjct: 519 AQDFILQCLQVNPNDRPTAAQLLNHSFVQRPLSQSSGSSFPH 560

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082218|ref|XP_002306607.1| predicted protein [Populus trichocarpa] gi|222856056|gb|EEE93603.1| predicted protein [Populus trichocarpa]

 Score =  155 bits (391), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 72/102 (70%), Positives = 86/102 (84%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD 87
           +VVN+KN GYGLPADIWS+GCTVLEMLTR  PY  +E +QALF+I RG  P +PDS+S D
Sbjct: 442 EVVNNKNQGYGLPADIWSLGCTVLEMLTRQIPYSELESMQALFRIGRGVPPLVPDSLSND 501

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPH 129
           ARDFIL+CLQVNPNDRPTAA L++HPF+KRPLPT  G  +P+
Sbjct: 502 ARDFILQCLQVNPNDRPTAAVLLDHPFMKRPLPTFSGSASPY 543

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545546|ref|XP_002513833.1| Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis] gi|223546919|gb|EEF48416.1| Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 70/103 (67%), Positives = 85/103 (82%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD 87
           +VVN K  GYGLPADIWS+GCTVLEMLTR  PY  +E +QALF+I +G  PP+PDS+S D
Sbjct: 449 EVVNRKTHGYGLPADIWSLGCTVLEMLTRQVPYSHLECMQALFRIGKGVPPPVPDSLSND 508

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHH 130
           ARDFIL+CLQVNPN RPTAAQL+EH FV++PLP S G  +P++
Sbjct: 509 ARDFILQCLQVNPNGRPTAAQLLEHSFVRQPLPMSSGSASPYY 551

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066881|ref|XP_002302260.1| predicted protein [Populus trichocarpa] gi|222843986|gb|EEE81533.1| predicted protein [Populus trichocarpa]

 Score =  152 bits (384), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 70/102 (68%), Positives = 86/102 (84%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD 87
           +VVN+KN GYGLPADIWS+GCTVLEMLTR  PY  +E +QALF+I RG  P +PDS+S D
Sbjct: 452 EVVNNKNQGYGLPADIWSLGCTVLEMLTRQIPYSELESMQALFRIGRGVPPLVPDSLSND 511

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPH 129
           AR+FIL+C+QVNPNDRPTAA L++HPFVK+ LPTS G  +P+
Sbjct: 512 AREFILQCIQVNPNDRPTAAVLLDHPFVKKLLPTSSGSASPY 553

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302141878|emb|CBI19081.3| unnamed protein product [Vitis vinifera]

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/101 (70%), Positives = 82/101 (81%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD 87
           +VVN K  GYGL ADIWS+GCTVLEMLTR  PY  +E +QALF+I +GE PP+PDS+S D
Sbjct: 166 EVVNGKGQGYGLAADIWSLGCTVLEMLTREVPYSHLESMQALFRIGKGEPPPVPDSLSPD 225

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 128
           ARDFILKCLQV P+DRPTAAQL+ H FVKRP PTS G  +P
Sbjct: 226 ARDFILKCLQVIPDDRPTAAQLLNHQFVKRPPPTSSGSASP 266

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459451|ref|XP_002284356.1| PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Vitis vinifera]

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 71/101 (70%), Positives = 82/101 (81%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD 87
           +VVN K  GYGL ADIWS+GCTVLEMLTR  PY  +E +QALF+I +GE PP+PDS+S D
Sbjct: 460 EVVNGKGQGYGLAADIWSLGCTVLEMLTREVPYSHLESMQALFRIGKGEPPPVPDSLSPD 519

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 128
           ARDFILKCLQV P+DRPTAAQL+ H FVKRP PTS G  +P
Sbjct: 520 ARDFILKCLQVIPDDRPTAAQLLNHQFVKRPPPTSSGSASP 560

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518515|ref|XP_003527924.1| PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Glycine max]

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/102 (66%), Positives = 81/102 (79%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD 87
           +VV  KN GYGLPADIWS+GCTVLEMLT   PY  +E V+AL++I +GE P IPDS+SRD
Sbjct: 448 EVVKGKNKGYGLPADIWSLGCTVLEMLTGQLPYCDLESVRALYRIGKGERPRIPDSLSRD 507

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPH 129
           A+DFIL+CLQV+PNDR TAAQL+ H FV+RPL  S G   PH
Sbjct: 508 AQDFILQCLQVSPNDRATAAQLLNHSFVQRPLSQSSGSSFPH 549

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486016|ref|XP_002264549.2| PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Vitis vinifera]

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/101 (67%), Positives = 83/101 (82%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD 87
           +VVN KN GYGL ADIWS+GCTVLE+LTR  PY  +E +QALF+I +GE PP+ +S+S D
Sbjct: 452 EVVNRKNKGYGLAADIWSLGCTVLEILTRRPPYSHLEGMQALFRIGKGEPPPVSNSLSSD 511

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 128
           AR+FILKCLQVNP+DRPTA QL++HPFVKRPL T  G  +P
Sbjct: 512 ARNFILKCLQVNPSDRPTAGQLLDHPFVKRPLHTFSGPQSP 552

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557517|ref|XP_003547062.1| PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Glycine max]

 Score =  145 bits (367), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 67/92 (72%), Positives = 80/92 (86%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD 87
           +VVN +N GYGL ADIWS+GCTVLEMLTR  PY  +E +QALF+I RG+ PP+P+S+S D
Sbjct: 333 EVVNLRNRGYGLAADIWSLGCTVLEMLTRQPPYSHLEGMQALFRIGRGQPPPVPESLSTD 392

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL 119
           ARDFILKCLQVNPN RPTAA+L++HPFVKRPL
Sbjct: 393 ARDFILKCLQVNPNKRPTAARLLDHPFVKRPL 424

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|298204644|emb|CBI23919.3| unnamed protein product [Vitis vinifera]

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/101 (67%), Positives = 83/101 (82%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD 87
           +VVN KN GYGL ADIWS+GCTVLE+LTR  PY  +E +QALF+I +GE PP+ +S+S D
Sbjct: 612 EVVNRKNKGYGLAADIWSLGCTVLEILTRRPPYSHLEGMQALFRIGKGEPPPVSNSLSSD 671

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 128
           AR+FILKCLQVNP+DRPTA QL++HPFVKRPL T  G  +P
Sbjct: 672 ARNFILKCLQVNPSDRPTAGQLLDHPFVKRPLHTFSGPQSP 712

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	135
TAIR|locus:2133559	608	MEKK1 "MAPK/ERK kinase kinase	0.718	0.159	0.632	4.9e-29
TAIR|locus:2133539	773	MAPKKK9 "mitogen-activated pro	0.814	0.142	0.548	5.6e-28
TAIR|locus:2118116	1895	WRKY19 [Arabidopsis thaliana (	0.785	0.055	0.583	1.5e-27
TAIR|locus:2133529	560	MEKK3 "MAPK/ERK kinase kinase	0.674	0.162	0.586	3.1e-24
TAIR|locus:2026674	883	YDA "YODA" [Arabidopsis thalia	0.703	0.107	0.505	3.9e-20
TAIR|locus:2024832	609	MAP3KA "mitogen-activated prot	0.674	0.149	0.516	8e-19
TAIR|locus:2035989	666	NP1 "NPK1-related protein kina	0.592	0.120	0.548	3.1e-17
UNIPROTKB|E1BXN6	1565	MAP3K4 "Uncharacterized protei	0.651	0.056	0.460	4e-17
UNIPROTKB|F1SB84	297	LOC100518100 "Uncharacterized	0.651	0.296	0.426	4.1e-17
UNIPROTKB|I3LSD0	114	LOC100518100 "Uncharacterized	0.651	0.771	0.426	4.1e-17

TAIR|locus:2133559 MEKK1 "MAPK/ERK kinase kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 329 (120.9 bits), Expect = 4.9e-29, P = 4.9e-29
 Identities = 62/98 (63%), Positives = 78/98 (79%)

Query:    25 LTDQVVNSKNG-GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDS 83
             +  +V+N K+  GYG PADIWS+GCTVLEM T   PY  +E VQALF+I RG LP +PD+
Sbjct:   496 MAPEVINRKDSDGYGSPADIWSLGCTVLEMCTGQIPYSDLEPVQALFRIGRGTLPEVPDT 555

Query:    84 VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT 121
             +S DAR FILKCL+VNP +RPTAA+L+ HPFV+RPLP+
Sbjct:   556 LSLDARLFILKCLKVNPEERPTAAELLNHPFVRRPLPS 593

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IGI

GO:0006970 "response to osmotic stress" evidence=IGI;IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0004709 "MAP kinase kinase kinase activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009611 "response to wounding" evidence=RCA;IDA

GO:0003677 "DNA binding" evidence=IDA

GO:0019900 "kinase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0000165 "MAPK cascade" evidence=IMP;RCA;IPI

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

TAIR|locus:2133539 MAPKKK9 "mitogen-activated protein kinase kinase kinase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 322 (118.4 bits), Expect = 5.6e-28, P = 5.6e-28
 Identities = 62/113 (54%), Positives = 82/113 (72%)

Query:    11 NALRRKWHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQAL 69
             N ++ +     W  +  +V+N K N GY  PADIWS+GCTVLEM T   PY  +E V+AL
Sbjct:   652 NDIKSRKETLFW--MAPEVINRKDNDGYRSPADIWSLGCTVLEMCTGQIPYSDLEPVEAL 709

Query:    70 FKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
             F+I RG LP +PD++S DAR FILKCL++NP +RPTA +L+ HPFV+RPLP+S
Sbjct:   710 FRIRRGTLPEVPDTLSLDARHFILKCLKLNPEERPTATELLNHPFVRRPLPSS 762

GO:0005737 "cytoplasm" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0031347 "regulation of defense response" evidence=IMP

TAIR|locus:2118116 WRKY19 [Arabidopsis thaliana (taxid:3702)]

 Score = 324 (119.1 bits), Expect = 1.5e-27, P = 1.5e-27
 Identities = 63/108 (58%), Positives = 77/108 (71%)

Query:    17 WHVSRWNSLTDQVV-NSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR 74
             W    WN +  +V+ N K+  GYG PADIWS+GCTVLEMLT   PY  +E   AL+ I  
Sbjct:  1777 WRTPYWNWMAPEVILNPKDYDGYGTPADIWSLGCTVLEMLTGQIPYSDLEIGTALYNIGT 1836

Query:    75 GELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
             G+LP IPD +S DARDFIL CL+VNP +RPTAA+L+ HPFV  PLP+S
Sbjct:  1837 GKLPKIPDILSLDARDFILTCLKVNPEERPTAAELLNHPFVNMPLPSS 1884

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0006952 "defense response" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0043531 "ADP binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

TAIR|locus:2133529 MEKK3 "MAPK/ERK kinase kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 284 (105.0 bits), Expect = 3.1e-24, P = 3.1e-24
 Identities = 54/92 (58%), Positives = 69/92 (75%)

Query:    25 LTDQVVNSKNG-GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDS 83
             +  +V+N K+  G G PADIWS+GCTVLEM T   PY  ++ +QA FKI RG LP +PD+
Sbjct:   466 MAPEVINRKDSDGNGSPADIWSLGCTVLEMCTGQIPYSDLKPIQAAFKIGRGTLPDVPDT 525

Query:    84 VSRDARDFILKCLQVNPNDRPTAAQLMEHPFV 115
             +S DAR FIL CL+VNP +RPTAA+L+ HPFV
Sbjct:   526 LSLDARHFILTCLKVNPEERPTAAELLHHPFV 557

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

TAIR|locus:2026674 YDA "YODA" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 3.9e-20, P = 3.9e-20
 Identities = 49/97 (50%), Positives = 65/97 (67%)

Query:    25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG-ELPPIPDS 83
             +  +V+ + NG   L  DIWS+GCTVLEM T   P+   E V A+FKI    ELP IPD 
Sbjct:   566 MAPEVIKNSNGS-NLAVDIWSLGCTVLEMATTKPPWSQYEGVPAMFKIGNSKELPDIPDH 624

Query:    84 VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 120
             +S + +DF+ KCLQ NP +RPTAAQL++H FV+  +P
Sbjct:   625 LSEEGKDFVRKCLQRNPANRPTAAQLLDHAFVRNVMP 661

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010103 "stomatal complex morphogenesis" evidence=IMP

GO:0007155 "cell adhesion" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0010229 "inflorescence development" evidence=IMP

TAIR|locus:2024832 MAP3KA "mitogen-activated protein kinase kinase kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 8.0e-19, P = 8.0e-19
 Identities = 48/93 (51%), Positives = 63/93 (67%)

Query:    25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG-ELPPIPDS 83
             +  +VV S+NG Y    DIWS+GCT+LEM T   P+   E V A+FKI    + P IPD 
Sbjct:   380 MAPEVVMSQNG-YTHAVDIWSLGCTILEMATSKPPWSQFEGVAAIFKIGNSKDTPEIPDH 438

Query:    84 VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
             +S DA++FI  CLQ NP  RPTA+QL+EHPF++
Sbjct:   439 LSNDAKNFIRLCLQRNPTVRPTASQLLEHPFLR 471

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2035989 NP1 "NPK1-related protein kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 3.1e-17, P = 3.1e-17
 Identities = 45/82 (54%), Positives = 60/82 (73%)

Query:    36 GYGLPADIWSVGCTVLEMLTRCRPYFG-VEWVQALFKIARGEL-PPIPDSVSRDARDFIL 93
             G+   ADIWSVGCTV+EM+T   P+    + V A+F I   +  PPIPD++S DA+DF+L
Sbjct:   250 GHSFSADIWSVGCTVIEMVTGKAPWSQQYKEVAAIFFIGTTKSHPPIPDTLSSDAKDFLL 309

Query:    94 KCLQVNPNDRPTAAQLMEHPFV 115
             KCLQ  PN RPTA++L++HPFV
Sbjct:   310 KCLQEVPNLRPTASELLKHPFV 331

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IDA

GO:0009908 "flower development" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0004709 "MAP kinase kinase kinase activity" evidence=ISS

UNIPROTKB|E1BXN6 MAP3K4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 225 (84.3 bits), Expect = 4.0e-17, P = 4.0e-17
 Identities = 41/89 (46%), Positives = 60/89 (67%)

Query:    29 VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIARGELPPIPDSVSRD 87
             +  +K  G+G  ADIWS+GC V+EM+T  RP+   E   Q ++++  G  PPIPD VS +
Sbjct:  1471 ITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYRVGMGHKPPIPDKVSPE 1530

Query:    88 ARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
              +DF+  CL+ +P  R TA+QL++HPFVK
Sbjct:  1531 GKDFLCHCLESDPKMRWTASQLLDHPFVK 1559

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0001890 "placenta development" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0019100 "male germ-line sex determination" evidence=IEA

GO:0043507 "positive regulation of JUN kinase activity" evidence=IEA

GO:0060718 "chorionic trophoblast cell differentiation" evidence=IEA

UNIPROTKB|F1SB84 LOC100518100 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 38/89 (42%), Positives = 58/89 (65%)

Query:    29 VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIARGELPPIPDSVSRD 87
             +  +K  G+G  ADIWS+GC V+EM+T  RP+   E   Q ++K+  G  PPIP+ +S +
Sbjct:   203 ITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHKPPIPERLSPE 262

Query:    88 ARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
              +DF+  CL+  P  R TA+QL++H F+K
Sbjct:   263 GKDFLAHCLESEPRMRWTASQLLDHSFIK 291

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|I3LSD0 LOC100518100 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 38/89 (42%), Positives = 58/89 (65%)

Query:    29 VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIARGELPPIPDSVSRD 87
             +  +K  G+G  ADIWS+GC V+EM+T  RP+   E   Q ++K+  G  PPIP+ +S +
Sbjct:    20 ITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHKPPIPERLSPE 79

Query:    88 ARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
              +DF+  CL+  P  R TA+QL++H F+K
Sbjct:    80 GKDFLAHCLESEPRMRWTASQLLDHSFIK 108

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	135
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	6e-42
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	4e-37
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-29
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-28
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	8e-28
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-27
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	7e-25
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	7e-25
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-24
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	7e-24
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-23
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-23
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	8e-23
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-21
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-21
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	9e-21
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-20
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	9e-20
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-19
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-19
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	7e-19
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-18
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-18
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	4e-17
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	9e-17
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	9e-17
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-16
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-16
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	5e-16
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	7e-16
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-15
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-15
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-15
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	3e-15
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	1e-14
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	2e-14
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-14
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	5e-14
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	5e-14
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	6e-14
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	8e-14
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	1e-13
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	1e-13
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-13
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-13
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-13
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-13
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	3e-13
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-13
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-13
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	4e-13
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-13
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	4e-13
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-13
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	6e-13
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	6e-13
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	1e-12
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-12
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-12
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	2e-12
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-12
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	4e-12
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	4e-12
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	4e-12
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-12
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-11
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	1e-11
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	1e-11
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-11
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-11
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-11
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	3e-11
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-11
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	4e-11
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	4e-11
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	5e-11
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	6e-11
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	8e-11
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	1e-10
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	1e-10
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-10
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	4e-10
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	4e-10
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	4e-10
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	6e-10
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	8e-10
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	8e-10
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	2e-09
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-09
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	3e-09
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	4e-09
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	5e-09
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	7e-09
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	8e-09
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-08
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-08
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	1e-08
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-08
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	2e-08
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	3e-08
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	3e-08
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	3e-08
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	4e-08
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	5e-08
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	6e-08
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	8e-08
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	9e-08
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	9e-08
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	9e-08
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	3e-07
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	4e-07
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	6e-07
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	7e-07
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-06
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-06
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-06
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-06
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-06
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	2e-06
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-06
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	3e-06
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	3e-06
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	3e-06
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	4e-06
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	5e-06
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	6e-06
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	6e-06
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	6e-06
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	8e-06
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-05
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-05
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	1e-05
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-05
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-05
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-05
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-05
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	2e-05
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-05
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	2e-05
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	3e-05
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	4e-05
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	4e-05
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	5e-05
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	5e-05
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	5e-05
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	6e-05
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	7e-05
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	7e-05
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	8e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	9e-05
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-04
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	1e-04
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-04
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-04
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-04
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	2e-04
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	2e-04
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-04
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	2e-04
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	3e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	3e-04
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	3e-04
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	3e-04
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	4e-04
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	4e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	4e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	5e-04
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	5e-04
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	6e-04
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	6e-04
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	6e-04
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	6e-04
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	8e-04
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	0.001
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	0.001
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	0.001
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	0.001
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	0.002
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	0.002
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	0.002
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	0.002
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	0.002
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	0.002
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	0.002
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	0.002
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	0.002
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	0.002
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	0.003
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	0.004
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	0.004
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	0.004
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	0.004

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  139 bits (351), Expect = 6e-42
 Identities = 56/89 (62%), Positives = 70/89 (78%), Gaps = 2/89 (2%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR-GELPPIPDSVSR 86
           +V+  + GGYGL ADIWS+GCTVLEM T   P+  +E V A+FKI R  ELPPIPD +S 
Sbjct: 171 EVIAQQ-GGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSD 229

Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFV 115
           +A+DFILKCLQ +P+ RPTAA+L+EHPFV
Sbjct: 230 EAKDFILKCLQRDPSLRPTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  126 bits (319), Expect = 4e-37
 Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 2/85 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WVQALFKIAR-GELPPIPDSVSRDARD 90
           +   YG  ADIWS+GCTV+EM T   P+  +   + AL+KI   GE P IP+ +S +A+D
Sbjct: 176 RGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKD 235

Query: 91  FILKCLQVNPNDRPTAAQLMEHPFV 115
           F+ KCL+ +P  RPTA +L++HPF+
Sbjct: 236 FLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  106 bits (268), Expect = 2e-29
 Identities = 35/75 (46%), Positives = 58/75 (77%)

Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           +DIWS+GCTV+E+LT   PY+ +  + ALF+I + + PP+P+ +S + +DF+++C Q +P
Sbjct: 180 SDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDP 239

Query: 101 NDRPTAAQLMEHPFV 115
           N RPTA QL++HP++
Sbjct: 240 NLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  104 bits (262), Expect = 1e-28
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 3/86 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIP---DSVSRDAR 89
              GYG   DIWS+G  + E+LT   P+ G + +  LFK      PP P     +S +A+
Sbjct: 169 LGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAK 228

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFV 115
           D I K L  +P  R TA + ++HPF 
Sbjct: 229 DLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  102 bits (256), Expect = 8e-28
 Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 2/84 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV--SRDARD 90
               Y   ADIWS+G T +E+     PY  +  ++ALFKIA    P + +    S + +D
Sbjct: 170 NGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKD 229

Query: 91  FILKCLQVNPNDRPTAAQLMEHPF 114
           F+ KCLQ NP  RPTA QL++HPF
Sbjct: 230 FLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  101 bits (253), Expect = 2e-27
 Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 5/89 (5%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPY--FGVEWVQALFKIARGELPPIPDS--VSR 86
             K  G+G  ADIWS+GC VLEM T  RP+     E+ Q +F +  G  PPIPDS  +S 
Sbjct: 177 GGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-QIMFHVGAGHKPPIPDSLQLSP 235

Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFV 115
           + +DF+ +CL+ +P  RPTA++L++HPFV
Sbjct: 236 EGKDFLDRCLESDPKKRPTASELLQHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 95.4 bits (238), Expect = 7e-25
 Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 1/91 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV-SRDARDF 91
           K  GY   ADIWS+G T +E+     P   +  ++ LF I +   P +  +  S+  +DF
Sbjct: 171 KQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDF 230

Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
           +  CL  +P +RP+A +L++H F+K+   TS
Sbjct: 231 VSLCLNKDPKERPSAKELLKHKFIKKAKKTS 261

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 95.2 bits (237), Expect = 7e-25
 Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 5/92 (5%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI-ARGELPPIPDSV-- 84
           +V++S + GY    DIWS+GC VLEM    RP+   E + A+FK+  +   PPIP  V  
Sbjct: 180 EVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSM 239

Query: 85  --SRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
             S  A DF+  C  +NP++RPTA +L++HPF
Sbjct: 240 NLSPVALDFLNACFTINPDNRPTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 93.4 bits (233), Expect = 3e-24
 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 4/84 (4%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE---WVQALFKIARGELPPIPDS-VSRDARDFI 92
           Y   ADIWS+G T+LE      P+       + + +  I  G  P +P    S + RDFI
Sbjct: 177 YSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFI 236

Query: 93  LKCLQVNPNDRPTAAQLMEHPFVK 116
             CLQ +P  RP+AA+L++HPF+K
Sbjct: 237 SACLQKDPKKRPSAAELLQHPFIK 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 92.2 bits (229), Expect = 7e-24
 Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 3/89 (3%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIPDSVSR 86
           +V++ +  GYG  AD+WSVGCTV+EMLT   P+   E + A+FKIA     P +P  VS 
Sbjct: 177 EVISGE--GYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSP 234

Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFV 115
           DAR+F+ +    N   RP+A +L+ H FV
Sbjct: 235 DARNFLRRTFVENAKKRPSAEELLRHFFV 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 90.7 bits (225), Expect = 3e-23
 Identities = 38/83 (45%), Positives = 54/83 (65%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           K   Y   ADIWS+GC V+EMLT   P+     +QA+FKI     P IP ++S +A DF+
Sbjct: 185 KQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSEAIDFL 244

Query: 93  LKCLQVNPNDRPTAAQLMEHPFV 115
            K  +++ N RPTAA+L++HPF+
Sbjct: 245 EKTFEIDHNKRPTAAELLKHPFL 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 90.4 bits (225), Expect = 4e-23
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 6/92 (6%)

Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIP------DS 83
           V     GYG   D+WS+G  + E+LT   P+ G   +  L  I R   PP+        S
Sbjct: 169 VLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSS 228

Query: 84  VSRDARDFILKCLQVNPNDRPTAAQLMEHPFV 115
            S +A+D I KCL  +P+ RPTA ++++HP+ 
Sbjct: 229 GSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 89.9 bits (223), Expect = 8e-23
 Identities = 37/90 (41%), Positives = 62/90 (68%), Gaps = 2/90 (2%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQA-LFKIARGEL-PPIPDSVS 85
           +V++    GYG PADIWS+GCT++EM T   P+  +   QA +FK+   ++ P IP+S+S
Sbjct: 179 EVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLS 238

Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEHPFV 115
            +A++FIL+C + +P+ R +A  L++ PF+
Sbjct: 239 AEAKNFILRCFEPDPDKRASAHDLLQDPFL 268

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 86.5 bits (215), Expect = 1e-21
 Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 4/96 (4%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSR 86
           V+  K+  YG   DIWS+G   +EM     PY     ++ALF I    +PP+  P+  S 
Sbjct: 187 VIKRKD--YGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSP 244

Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
           + +DF+ KCL  +P  RP+A +L++HPF+K+  P  
Sbjct: 245 EFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKE 280

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 85.2 bits (212), Expect = 3e-21
 Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 2/84 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDF 91
           +N  Y   +DIWS+GC + E+ T   P F  E +  L  KI +G+ PPIP   S + R+ 
Sbjct: 176 QNKPYNYKSDIWSLGCVLYELCTLKHP-FEGENLLELALKILKGQYPPIPSQYSSELRNL 234

Query: 92  ILKCLQVNPNDRPTAAQLMEHPFV 115
           +   LQ +P +RP+ AQ+++ PF+
Sbjct: 235 VSSLLQKDPEERPSIAQILQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 84.2 bits (208), Expect = 9e-21
 Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 4/90 (4%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA--RGELPPIPDSVS 85
           +V+N    GYG  +DIWS+GCTV EM T   P   ++ + A+F I   RG +P +PDS S
Sbjct: 178 EVINES--GYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFS 235

Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEHPFV 115
             A DF+  CL  + ++RP+A QL+ H F+
Sbjct: 236 AAAIDFVTSCLTRDQHERPSALQLLRHDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 83.0 bits (205), Expect = 3e-20
 Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 5/90 (5%)

Query: 32  SKNGGYGLPADIWSVGCTVLEMLTRCRPY----FGVEWVQALFKIARGELPPIPDSVSRD 87
           ++N  Y + +D+WS+G ++LEM     PY    +   + Q L  I  G+ P +P   S D
Sbjct: 179 NQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQ-LSAIVDGDPPTLPSGYSDD 237

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           A+DF+ KCL   PN RPT AQL+EHP++ +
Sbjct: 238 AQDFVAKCLNKIPNRRPTYAQLLEHPWLVK 267

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 81.7 bits (202), Expect = 9e-20
 Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 2/89 (2%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDA 88
             K+  Y   ADIWS+G T++E+     P+  +  ++ L KI + E P +  P   S   
Sbjct: 179 TFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSF 238

Query: 89  RDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
            DF+  CL  +P+DRPTAA+L++HPFV  
Sbjct: 239 NDFLKSCLVKDPDDRPTAAELLKHPFVSD 267

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 81.1 bits (200), Expect = 1e-19
 Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 4/81 (4%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE---WVQALFKIARG-ELPPIPDSVSRDARDFI 92
           YG   D+WSVGC ++EM T   P+   +    +  +FKIA     P IP+ +S   RD  
Sbjct: 185 YGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVT 244

Query: 93  LKCLQVNPNDRPTAAQLMEHP 113
           L+CL++ P DRP + +L++HP
Sbjct: 245 LRCLELQPEDRPPSRELLKHP 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 79.5 bits (197), Expect = 5e-19
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDF 91
              GYG   D WS+G  + EMLT   P++  +  + ++ KI +  L   P+ +S +ARD 
Sbjct: 166 LGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED-RKEIYEKILKDPLR-FPEFLSPEARDL 223

Query: 92  ILKCLQVNPNDRPT---AAQLMEHPF 114
           I   LQ +P  R     A ++  HPF
Sbjct: 224 ISGLLQKDPTKRLGSGGAEEIKAHPF 249

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 79.3 bits (195), Expect = 7e-19
 Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 2/82 (2%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIPDSVSRDARDFILK 94
           GYG  AD+WS+GCTV+EMLT   P+   E + A+FKIA     P +P  +S  ARDF L 
Sbjct: 185 GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDF-LG 243

Query: 95  CLQVNPNDRPTAAQLMEHPFVK 116
           C+ V    RP+A +L+ HPF +
Sbjct: 244 CIFVEARHRPSAEELLRHPFAQ 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 78.5 bits (194), Expect = 1e-18
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 6/84 (7%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP----IPDSVSRDARDF 91
           GY   ADIWS+G T +EM     PY  +  ++A+F I     PP     P+  S +  DF
Sbjct: 175 GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK--PPPTLSDPEKWSPEFNDF 232

Query: 92  ILKCLQVNPNDRPTAAQLMEHPFV 115
           + KCL  +P +RP+A QL++HPF+
Sbjct: 233 VKKCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 79.5 bits (196), Expect = 1e-18
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI-PDSVSRDARDFIL 93
           G Y    D+WS+G T +E+  R  P F +  + AL+ IA+ + P +  +  S   R+F+ 
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVD 248

Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLP 120
            CLQ  P DRP++ +L++H FV R  P
Sbjct: 249 SCLQKIPQDRPSSEELLKHRFVLRERP 275

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 74.3 bits (182), Expect = 4e-17
 Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 4/92 (4%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP-IPDS 83
           ++ +V++ +  GYG  AD+WSV CTV+EMLT   P+   E + A+FKIA     P +PD 
Sbjct: 176 MSPEVISGE--GYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDG 233

Query: 84  VSRDARDFILKCLQVNPNDRPTAAQLMEHPFV 115
           VS   RDF LK + V    RPTA  L+ HPFV
Sbjct: 234 VSDACRDF-LKQIFVEEKRRPTAEFLLRHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 73.5 bits (181), Expect = 9e-17
 Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI----PDSVSR 86
             + GGY    DIW++G T +E+     P F +  ++ALF I++   PP      +  S 
Sbjct: 175 VERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSP 234

Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPF 114
              DFI KCL  +P  RPTA +L++HPF
Sbjct: 235 VFHDFIKKCLTKDPKKRPTATKLLQHPF 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 73.9 bits (181), Expect = 9e-17
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDARD 90
           K+  Y   ADIWS+G T++EM     P+  +  ++ L KIA+ E P +  P   S + RD
Sbjct: 188 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRD 247

Query: 91  FILKCLQVNPNDRPTAAQLMEHPFVKR 117
           F+   L  +P  RP+AAQL+EHPFV  
Sbjct: 248 FLKTALDKHPETRPSAAQLLEHPFVSS 274

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 72.4 bits (177), Expect = 2e-16
 Identities = 41/81 (50%), Positives = 50/81 (61%), Gaps = 2/81 (2%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIPDSVSRDARDFILK 94
           GYG  ADIWSVGCTV+EMLT   P+   E + A+FKIA     P +P  VS   RDF LK
Sbjct: 185 GYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDF-LK 243

Query: 95  CLQVNPNDRPTAAQLMEHPFV 115
            + V    RP+A +L+ H FV
Sbjct: 244 RIFVEAKLRPSADELLRHTFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 71.7 bits (176), Expect = 4e-16
 Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 2/84 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQAL-FKIARGELPPIPDSVSRDARDF 91
           K   Y   +DIWS+GC + EM T   P F    +Q L +K+ RG+ PPIP   S+D ++F
Sbjct: 174 KGRPYSYKSDIWSLGCLLYEMAT-FAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNF 232

Query: 92  ILKCLQVNPNDRPTAAQLMEHPFV 115
           I   LQV P  RP   +++  P V
Sbjct: 233 IRSMLQVKPKLRPNCDKILASPAV 256

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 71.6 bits (176), Expect = 5e-16
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 6/89 (6%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-----VQALFKIARGELPPIPDSV-SRDA 88
             Y + +DIWS+G +++E+ T   PY           + L  I     P +P    S D 
Sbjct: 174 NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDF 233

Query: 89  RDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           +DF+  CL  +P +RP+  +L+EHPF+K+
Sbjct: 234 QDFVNLCLIKDPRERPSYKELLEHPFIKK 262

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 71.1 bits (175), Expect = 7e-16
 Identities = 24/79 (30%), Positives = 40/79 (50%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL 96
           Y   +DIWS+GC + E+     P+     +Q   KI  G+   IP   S +  + I   L
Sbjct: 187 YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSML 246

Query: 97  QVNPNDRPTAAQLMEHPFV 115
            V+P+ RP+  +L++ P +
Sbjct: 247 NVDPDKRPSTEELLQLPLI 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 70.5 bits (173), Expect = 2e-15
 Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 6/85 (7%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEW---VQALFKIARGELPPIP-DSVSRDARDF 91
           GY + +D+WS+G T++E+ T   PY    W    Q L ++     P +P +  S + +DF
Sbjct: 183 GYDVKSDVWSLGITMIELATGRFPY--DSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDF 240

Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVK 116
           + KCL+ N  +RP   +L++HPF +
Sbjct: 241 VNKCLKKNYKERPNYPELLQHPFFE 265

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 69.8 bits (171), Expect = 2e-15
 Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 4/94 (4%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI---PDSVSRDARDFIL 93
           YG   DIWS+G  V+EM+    PYF    +QA+ +I R  LPP       VS   R F+ 
Sbjct: 192 YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRI-RDNLPPKLKNLHKVSPRLRSFLD 250

Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPT 127
           + L  +P  R TAA+L+ HPF+ +  P S  +P 
Sbjct: 251 RMLVRDPAQRATAAELLNHPFLAKAGPPSSIVPL 284

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 70.3 bits (173), Expect = 3e-15
 Identities = 35/134 (26%), Positives = 51/134 (38%), Gaps = 45/134 (33%)

Query: 25  LTDQVV-----------NSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI 72
           LT+ VV           +S    Y    DIWSVGC   E+LTR +P F G +++  L  I
Sbjct: 163 LTEYVVTRWYRAPELLLSSSR--YTKAIDIWSVGCIFAELLTR-KPLFPGRDYIDQLNLI 219

Query: 73  -------------------------ARGELPPIP-----DSVSRDARDFILKCLQVNPND 102
                                    +  + P  P        S +A D + K L  +P  
Sbjct: 220 VEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKK 279

Query: 103 RPTAAQLMEHPFVK 116
           R TA + + HP++ 
Sbjct: 280 RITADEALAHPYLA 293

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 70.2 bits (172), Expect = 3e-15
 Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 34  NGGY-GLPADIWSVGCTVLEMLTRCRPYFGV----EWVQALFKIARGELPPIPDSVSRDA 88
           +G Y G   DIWS+G ++LE      P FGV    +W   +  I   + P  P + SR+ 
Sbjct: 246 HGAYDGYAGDIWSLGVSILEFYLGRFP-FGVGRQGDWASLMCAICMSQPPEAPATASREF 304

Query: 89  RDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHFIM 133
           R FI  CLQ  P  R +A QL++HPF+ R  P         H ++
Sbjct: 305 RHFISCCLQREPAKRWSAMQLLQHPFILRAQPGQGQGGPNLHQLL 349

Length = 353

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 67.7 bits (166), Expect = 1e-14
 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)

Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDARDFILKCLQV 98
           +D+WS+G T +E+     P   +  ++ALFKI R   P +  P++ S+   DFI +CL  
Sbjct: 199 SDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIK 258

Query: 99  NPNDRPTAAQLMEHPFV 115
           N   RP   +L+EHPF+
Sbjct: 259 NYEQRPFMEELLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 67.7 bits (165), Expect = 2e-14
 Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 2/86 (2%)

Query: 32  SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDAR 89
           SK+  Y   AD+WS+G T++EM     P+  +  ++ L KIA+ E P +  P   S + +
Sbjct: 180 SKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFK 239

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFV 115
           DF+ KCL+ N + R T  QL++HPFV
Sbjct: 240 DFLKKCLEKNVDARWTTTQLLQHPFV 265

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 67.3 bits (165), Expect = 2e-14
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 6/88 (6%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPD-SVSRDARDF 91
             G+    D WS+GC + E L    P+ G E  + +F  I  G++    D  VS +A D 
Sbjct: 175 GQGHSKTVDWWSLGCILYEFLVGIPPFHG-ETPEEIFQNILNGKIEWPEDVEVSDEAIDL 233

Query: 92  ILKCLQVNPNDRPTAA---QLMEHPFVK 116
           I K L  +P  R  A    ++  HPF K
Sbjct: 234 ISKLLVPDPEKRLGAKSIEEIKNHPFFK 261

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 66.1 bits (161), Expect = 5e-14
 Identities = 30/83 (36%), Positives = 46/83 (55%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           +N  Y    DIWS+GC + E+ T   P+ G    Q + KI +G   PI  + SRD R  I
Sbjct: 175 QNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLI 234

Query: 93  LKCLQVNPNDRPTAAQLMEHPFV 115
            +  +V+P DRP+   +++ PF+
Sbjct: 235 SQLFKVSPRDRPSITSILKRPFL 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 66.7 bits (162), Expect = 5e-14
 Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 1/89 (1%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDA-RDFIL 93
           G Y    D+WS+G T +E+  R  P F +  + AL+ IA+ E P +  +   D  R+F+ 
Sbjct: 199 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVD 258

Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
            CLQ  P DRPT+ +L++H FV R  P +
Sbjct: 259 SCLQKIPQDRPTSEELLKHMFVLRERPET 287

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 65.8 bits (161), Expect = 6e-14
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 5/84 (5%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV-----SRDARD 90
           GY   ADIWS G T +E+ T   PY     ++ L    + + P +         S+  R 
Sbjct: 183 GYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRK 242

Query: 91  FILKCLQVNPNDRPTAAQLMEHPF 114
            I  CLQ +P+ RPTA +L++H F
Sbjct: 243 MISLCLQKDPSKRPTAEELLKHKF 266

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 65.6 bits (161), Expect = 8e-14
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  + E+ T   +PY G+   + L  +  G   P P +   +  D +L+C   +P
Sbjct: 185 DVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNCPPELYDLMLQCWAEDP 244

Query: 101 NDRPTAAQLME 111
            DRPT ++L+E
Sbjct: 245 EDRPTFSELVE 255

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 65.8 bits (160), Expect = 1e-13
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDA-RDFIL 93
           G Y    D+WS+G T +E+  R  P F +  + AL+ IA+ + P +  +   D+ R F+ 
Sbjct: 195 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVD 254

Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLP 120
            CLQ  P +RP +A+L+ H FV+R  P
Sbjct: 255 YCLQKIPQERPASAELLRHDFVRRDRP 281

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 65.5 bits (160), Expect = 1e-13
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIARGELPPIP--DSVSRD 87
              N  Y + AD+WS+G +++E+ T   PY   +   + L KI + E P +P  +  S D
Sbjct: 189 PDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPD 248

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
              F+  CL  +   RP   +L++HPF++R
Sbjct: 249 FCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 65.2 bits (159), Expect = 1e-13
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPD-SVSRDARDFILKC 95
           Y   ADIWS+G T+ EM T   PY  V+  +A+  I + + P + D   S+  R+F+  C
Sbjct: 179 YDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAAC 238

Query: 96  LQVNPNDRPTAAQLMEHPFVK 116
           L   P +R +A +L++  ++K
Sbjct: 239 LDEEPKERLSAEELLKSKWIK 259

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 64.8 bits (159), Expect = 1e-13
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
           K+G +   +D+WS G  + E+ T    PY G+   + L  +  G   P P++   +  + 
Sbjct: 177 KDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRPENCPDELYEL 236

Query: 92  ILKCLQVNPNDRPTAAQLMEH 112
           +L+C   +P DRPT ++L+E 
Sbjct: 237 MLQCWAYDPEDRPTFSELVED 257

Length = 258

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 64.9 bits (158), Expect = 2e-13
 Identities = 26/79 (32%), Positives = 39/79 (49%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL 96
           Y   +DIW++GC + E+ +  R +        + KI  G   PI D  S D R  IL  L
Sbjct: 178 YNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSML 237

Query: 97  QVNPNDRPTAAQLMEHPFV 115
            ++P+ RP  +Q+M  P  
Sbjct: 238 NLDPSKRPQLSQIMAQPIC 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 64.5 bits (158), Expect = 2e-13
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  + E+ T    PY G+   + L  + +G   P P +   +    +L+C   +P
Sbjct: 186 DVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNCPPELYKLMLQCWAEDP 245

Query: 101 NDRPTAAQLME 111
            DRPT ++L+E
Sbjct: 246 EDRPTFSELVE 256

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 64.5 bits (157), Expect = 3e-13
 Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 4/97 (4%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVS 85
           +VV  K   YG   DIWS+G   +EM+    PY     ++AL+ IA    P +  P+ +S
Sbjct: 185 EVVTRKA--YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 242

Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
              RDF+ +CL+++   R +A +L++HPF+K   P S
Sbjct: 243 AIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLS 279

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 64.1 bits (156), Expect = 3e-13
 Identities = 22/77 (28%), Positives = 35/77 (45%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL 96
           Y   +D+W++G  + E  T   P+        + KI RG  PP+    S+     I +CL
Sbjct: 178 YNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCL 237

Query: 97  QVNPNDRPTAAQLMEHP 113
             +   RP   QL+ +P
Sbjct: 238 TKDYRQRPDTFQLLRNP 254

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 64.0 bits (156), Expect = 3e-13
 Identities = 23/78 (29%), Positives = 40/78 (51%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL 96
           Y   +DIW++GC + E+LT  R +     +  + KI +G   P+    S +    +   L
Sbjct: 178 YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLL 237

Query: 97  QVNPNDRPTAAQLMEHPF 114
           Q +P  RPTA ++++ P 
Sbjct: 238 QQDPEKRPTADEVLDQPL 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 64.0 bits (155), Expect = 4e-13
 Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 4/100 (4%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PD 82
           +  +VV  K   YG   DIWS+G   +EM+    PY     ++AL+ IA    P +  P+
Sbjct: 182 MAPEVVTRK--AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPE 239

Query: 83  SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
            +S   RDF+ +CL+++   R +A +L++HPF+K   P S
Sbjct: 240 KLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLS 279

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 63.7 bits (156), Expect = 4e-13
 Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 30/107 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR-------------GELP---- 78
           Y    DIWSVGC   EM+T  +P F G   +  LFKI +              +LP    
Sbjct: 176 YSTAVDIWSVGCIFAEMITG-KPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP 234

Query: 79  ------PIPDS-----VSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
                 P         +  +  D + K LQ NP  R +A + ++HP+
Sbjct: 235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY 281

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 64.0 bits (155), Expect = 4e-13
 Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 4/100 (4%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PD 82
           +  +VV  K   YG   DIWS+G   +EM+    PY     ++AL+ IA    P +  P+
Sbjct: 182 MAPEVVTRK--AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPE 239

Query: 83  SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
            +S   RDF+ +CL+++ + R +A +L++HPF+K   P S
Sbjct: 240 RLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLS 279

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 64.0 bits (154), Expect = 5e-13
 Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 12/104 (11%)

Query: 27  DQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWVQALFKIARGELPP---- 79
           + ++          +DIWS+G T+ E+LT   P+ G           KI      P    
Sbjct: 178 EVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLAS 237

Query: 80  -----IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP 118
                 P+ +S+ A D + K L  +P +R +++  + H  +   
Sbjct: 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL 281

Length = 384

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 63.5 bits (154), Expect = 6e-13
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 1/89 (1%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDA-RDFIL 93
           G Y    D+WS+G T +E+  R  P F +  + AL+ IA+ E P +      +  R+F+ 
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVD 248

Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
            CLQ  P DRPT+  L++H FV R  P +
Sbjct: 249 SCLQKIPQDRPTSEVLLKHRFVLRERPPT 277

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 62.9 bits (154), Expect = 6e-13
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 11/93 (11%)

Query: 21  RWN---SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGE 76
           RW    SL D +  SK+       D+WS G  + E+ T    PY G+   + L  + +G 
Sbjct: 172 RWMAPESLKDGIFTSKS-------DVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGY 224

Query: 77  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQL 109
             P P+    +  + +L C Q++P DRPT ++L
Sbjct: 225 RLPKPEYCPDELYELMLSCWQLDPEDRPTFSEL 257

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 62.9 bits (153), Expect = 1e-12
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 8/96 (8%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQ-ALFKIARGEL---PPIPDS 83
           +V+   +GG+    D WS+G    E+LT   P F V+  Q +  +I+R  L   PP P +
Sbjct: 176 EVIRGGSGGHDKAVDWWSLGVLTFELLTGASP-FTVDGEQNSQSEISRRILKSKPPFPKT 234

Query: 84  VSRDARDFILKCLQVNPNDR---PTAAQLMEHPFVK 116
           +S +ARDFI K L+ +P  R     A ++  HPF +
Sbjct: 235 MSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQ 270

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 62.4 bits (151), Expect = 1e-12
 Identities = 28/85 (32%), Positives = 45/85 (52%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           K   Y   ADIWS+G T +E+     P   +  ++ LF I +   P +    S+  ++F+
Sbjct: 174 KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFV 233

Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKR 117
             CL  +P  RPTA +L++H F+ R
Sbjct: 234 EACLNKDPRFRPTAKELLKHKFITR 258

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 62.0 bits (151), Expect = 2e-12
 Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 32/109 (29%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR--GELPP-------------- 79
           YG   DIW+VGC V EMLT   P F G   +  L+ I +  G L P              
Sbjct: 178 YGRAVDIWAVGCLVTEMLTG-EPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAG 236

Query: 80  --IPD------------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
             +P+             +S    D   +CL+++P+DRP+++QL+ H F
Sbjct: 237 MRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 61.8 bits (150), Expect = 2e-12
 Identities = 26/83 (31%), Positives = 42/83 (50%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           +N  Y   +DIW++GC + EM T    +        + KI RG  PP+    S D R+ +
Sbjct: 174 ENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLV 233

Query: 93  LKCLQVNPNDRPTAAQLMEHPFV 115
            +  + NP DRP+   ++E  F+
Sbjct: 234 SQLFKRNPRDRPSVNSILEKNFI 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 61.6 bits (150), Expect = 3e-12
 Identities = 39/126 (30%), Positives = 53/126 (42%), Gaps = 33/126 (26%)

Query: 19  VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI----- 72
           V+RW    + ++  K  GY  P DIWSVGC   E+L+R RP F G   +  LFKI     
Sbjct: 160 VTRWYRAPELLLGDK--GYSTPVDIWSVGCIFAELLSR-RPLFPGKSEIDQLFKIFRTLG 216

Query: 73  -------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRPTAAQ 108
                        AR      P            + S  A D + + L  +P+ R TA Q
Sbjct: 217 TPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQ 276

Query: 109 LMEHPF 114
            + HP+
Sbjct: 277 ALAHPY 282

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 60.9 bits (148), Expect = 4e-12
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 11/95 (11%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPY-----FGVEWVQALFKIARGELPPIPD----- 82
           +   Y + +D+WS+G T+LE+     P+       +  ++ L  I     P + D     
Sbjct: 176 QGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNG 235

Query: 83  -SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
              S + +DFI +CL+ +P  RPT   ++EHP++K
Sbjct: 236 IKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIK 270

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 60.7 bits (147), Expect = 4e-12
 Identities = 26/83 (31%), Positives = 47/83 (56%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           K+ GY   +DIWS+GC + EM      + G  ++  + +I  G  P +P++ SR     +
Sbjct: 178 KHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIM 237

Query: 93  LKCLQVNPNDRPTAAQLMEHPFV 115
              L  +P+ RP+AA+++ +PF+
Sbjct: 238 QSMLNKDPSLRPSAAEILRNPFI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 61.2 bits (149), Expect = 4e-12
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 33/114 (28%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP----------------- 78
           GY   +DI+SVG T  E+     P+  +   Q L +  RG +P                 
Sbjct: 186 GYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQ 245

Query: 79  ---PIPDSVSRDARD-------------FILKCLQVNPNDRPTAAQLMEHPFVK 116
                    +RD+ D             F+  CLQ +P  RP+A+QL+ H F K
Sbjct: 246 SRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFK 299

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 60.7 bits (148), Expect = 5e-12
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 9/80 (11%)

Query: 41  ADIWSVGCTVLEMLTRCRPYF--GVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV 98
           +D+W++GC + +MLT  +P F    E++   F+         P +   DA+D I K L +
Sbjct: 203 SDLWALGCIIYQMLT-GKPPFRGSNEYL--TFQKILKLEYSFPPNFPPDAKDLIEKLLVL 259

Query: 99  NPNDRPTA----AQLMEHPF 114
           +P DR        +L  HPF
Sbjct: 260 DPQDRLGVNEGYDELKAHPF 279

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 59.9 bits (146), Expect = 1e-11
 Identities = 38/114 (33%), Positives = 48/114 (42%), Gaps = 30/114 (26%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR--------------------- 74
           YG+  D+WSVGC   E+L R  P+  G   +  L KI                       
Sbjct: 180 YGVGVDMWSVGCIFAELLLR-VPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVE 238

Query: 75  -GELPPIP-----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPT 121
               PP P      + S DA D + + L +NPN R TA Q +EHP F   P PT
Sbjct: 239 FKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPT 292

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 59.7 bits (145), Expect = 1e-11
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 30/108 (27%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR--GELPP--------------- 79
           YG P D+W++GC   E+LT    + G   V  L+ I +  G+L P               
Sbjct: 178 YGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGL 237

Query: 80  -IPD------------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
            IP+            ++S  A  F+  CLQ++P +R +  +L+EHP+
Sbjct: 238 SIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 59.7 bits (144), Expect = 1e-11
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PD 82
           +  +VV  K   YG   DIWS+G   +EM+    PY     ++AL+ IA    P +  P+
Sbjct: 183 MAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPE 240

Query: 83  SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
            +S   RDF+ +CL ++   R +A +L++H F+K   P S
Sbjct: 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLS 280

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 59.4 bits (144), Expect = 2e-11
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV-SRDARDF 91
           KN  YG  AD+W+ GC + +M T   P++    +    KI      P+P+ + S D  D 
Sbjct: 186 KNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDV 245

Query: 92  ILKCLQVNPNDRP 104
           I  CL  +   RP
Sbjct: 246 ITSCLTPDAEARP 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 59.3 bits (143), Expect = 2e-11
 Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP-IPDS--VSRDARDFIL 93
           YG   DIWS+G  V+EM+    PYF    +QA+ +I R  LPP + DS  VS   R F+ 
Sbjct: 195 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI-RDNLPPRVKDSHKVSSVLRGFLD 253

Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHF 131
             L   P+ R TA +L++HPF+K   P S  +P    +
Sbjct: 254 LMLVREPSQRATAQELLQHPFLKLAGPPSCIVPLMRQY 291

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 59.3 bits (143), Expect = 2e-11
 Identities = 28/85 (32%), Positives = 47/85 (55%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           K   Y   ADIWS+G T +E+     P+  +  ++ LF I +   P +  + S+  ++F+
Sbjct: 174 KQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 233

Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKR 117
             CL   P+ RPTA +L++H F+ R
Sbjct: 234 EACLNKEPSFRPTAKELLKHKFIVR 258

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 58.7 bits (143), Expect = 3e-11
 Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 31/108 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF--------------------------GVEWVQAL- 69
           Y  P DIW++GC + E+ T  RP F                          G +    L 
Sbjct: 176 YSSPVDIWALGCIMAELYT-LRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234

Query: 70  FKIARGELPPIPD---SVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
           F+  +     +     + S +A D I   L+ +P  RPTA+Q ++HP+
Sbjct: 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 57.6 bits (140), Expect = 3e-11
 Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 32/84 (38%)

Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDAR 89
           V    G Y   +DIWS+G  + E+                                 + +
Sbjct: 164 VLLGKGYYSEKSDIWSLGVILYEL--------------------------------PELK 191

Query: 90  DFILKCLQVNPNDRPTAAQLMEHP 113
           D I K LQ +P  RP+A +++EH 
Sbjct: 192 DLIRKMLQKDPEKRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 58.5 bits (142), Expect = 4e-11
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 35/128 (27%)

Query: 19  VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR--G 75
            +RW    + +V   N  YG P D+W++GC + E+L    P F G   +  L+ I +  G
Sbjct: 163 ATRWYRAPELLVGDTN--YGKPVDVWAIGCIMAELLDG-EPLFPGDSDIDQLYLIQKCLG 219

Query: 76  ELPP----------------IPD-------------SVSRDARDFILKCLQVNPNDRPTA 106
            LPP                 P+              VS  A DF+  CL+++P +R T 
Sbjct: 220 PLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTC 279

Query: 107 AQLMEHPF 114
            +L++HP+
Sbjct: 280 DELLQHPY 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 58.2 bits (141), Expect = 4e-11
 Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALF-KIARGELPPIP-DSVSRDARDFI 92
           GY   +DIWS+GC + EM     P++G +  + +L  KI + + PP+P D  S + RD +
Sbjct: 182 GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLV 241

Query: 93  LKCLQVNPNDRPTAAQLME 111
            +C+  +P  RP  + +++
Sbjct: 242 SRCINPDPEKRPDISYVLQ 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 58.1 bits (140), Expect = 5e-11
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDA---RDFIL 93
           YG   DIWS+G  V+EM+    PYF    VQA+ K  R   PP   +  + +   RDF+ 
Sbjct: 194 YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM-KRLRDSPPPKLKNAHKISPVLRDFLE 252

Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
           + L   P +R TA +L++HPF+
Sbjct: 253 RMLTREPQERATAQELLDHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 57.7 bits (139), Expect = 6e-11
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDARDFILK 94
           Y    D+WS+G T +E+     P F +  V+ LFKI R   P +  P+   R    FI +
Sbjct: 210 YDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQ 269

Query: 95  CLQVNPNDRPTAAQLMEHPFVK 116
           CL  +   RP+   L+EHPF+K
Sbjct: 270 CLIKDFEARPSVTHLLEHPFIK 291

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 57.6 bits (140), Expect = 8e-11
 Identities = 33/107 (30%), Positives = 44/107 (41%), Gaps = 32/107 (29%)

Query: 42  DIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIARGELPPIPDSV---------------- 84
           D+WSVGC + EML   +P F G   +  L KI     PP  + +                
Sbjct: 195 DMWSVGCILGEML-LGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLP 253

Query: 85  --------------SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
                         S DA D + K L  NPN R TA + +EHP+V +
Sbjct: 254 SRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 56.9 bits (137), Expect = 1e-10
 Identities = 23/82 (28%), Positives = 41/82 (50%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           N  Y   +D+W++GC V EM T    +   +    +++I  G+LPP+P   S +  + I 
Sbjct: 176 NKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIA 235

Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
             L   P  RP+   ++  P++
Sbjct: 236 TMLSKRPEKRPSVKSILRQPYI 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 57.0 bits (137), Expect = 1e-10
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--PPIPDSV--SRDA 88
           + GGY    DIW+VG T +E+     P F +  ++ALF + +     P + D +  S   
Sbjct: 182 RKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSF 241

Query: 89  RDFILKCLQVNPNDRPTAAQLMEHPF 114
             F+   L  NP  RPTA +L++HPF
Sbjct: 242 HHFVKMALTKNPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 56.6 bits (136), Expect = 1e-10
 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 1/92 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           +   Y   ADIWS+G T +E+     P   +  ++ LF I +   P +    S+  ++FI
Sbjct: 174 QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFI 233

Query: 93  LKCLQVNPNDRPTAAQLMEHPF-VKRPLPTSW 123
             CL  +P+ RPTA +L++H F VK    TS+
Sbjct: 234 DACLNKDPSFRPTAKELLKHKFIVKNAKKTSY 265

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 55.8 bits (134), Expect = 4e-10
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 4/93 (4%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDS---VSRDARDFIL 93
           YG   DIWS+G  V+EM+    PYF    ++A+ K+ R  LPP   +   VS   + F+ 
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPKLKNLHKVSPSLKGFLD 251

Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 126
           + L  +P  R TAA+L++HPF+ +  P S  +P
Sbjct: 252 RLLVRDPAQRATAAELLKHPFLAKAGPPSCIVP 284

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 55.6 bits (134), Expect = 4e-10
 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 7/85 (8%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL--PPIPDSVSRDARDFI 92
           GYG P D W++G  + E L  C P+FG +  + LF ++   ++  P   +++  DA+D I
Sbjct: 192 GYGKPVDWWAMGIILYEFLVGCVPFFG-DTPEELFGQVISDDIEWPEGDEALPADAQDLI 250

Query: 93  LKCLQVNPNDR---PTAAQLMEHPF 114
            + L+ NP +R     A ++ +H F
Sbjct: 251 SRLLRQNPLERLGTGGAFEVKQHRF 275

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 55.5 bits (133), Expect = 4e-10
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV-SRDARDFILKC 95
           Y   +D+WS+G T +EM     P   +  ++ALF I R   P +     S+  + FI  C
Sbjct: 193 YDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESC 252

Query: 96  LQVNPNDRPTAAQLMEHPFV 115
           L  N + RPT  QLM+HPF+
Sbjct: 253 LVKNHSQRPTTEQLMKHPFI 272

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 55.0 bits (132), Expect = 6e-10
 Identities = 24/78 (30%), Positives = 40/78 (51%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           +N  Y   +DIWS+GC + E+ T   P+    W   + K+ +G   P+P   S + R  I
Sbjct: 173 ENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLI 232

Query: 93  LKCLQVNPNDRPTAAQLM 110
            +  + NP  RP+A  ++
Sbjct: 233 KQMFKRNPRSRPSATTIL 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 55.3 bits (133), Expect = 8e-10
 Identities = 24/80 (30%), Positives = 44/80 (55%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL 96
           Y   AD++S+G  + E+LT  RP+ G    + + K   G   P+P S+S + ++ +   L
Sbjct: 222 YSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALL 281

Query: 97  QVNPNDRPTAAQLMEHPFVK 116
             +P  RP++++L+  P  K
Sbjct: 282 SSDPKRRPSSSKLLNMPICK 301

Length = 496

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 54.7 bits (131), Expect = 8e-10
 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--PPIPDSV--SRDA 88
           KNGGY    DIW+VG T +E+     P F +  ++ALF +++     P + D    S   
Sbjct: 182 KNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTF 241

Query: 89  RDFILKCLQVNPNDRPTAAQLMEHPF 114
            +F+   L  NP  RPTA +L+ H F
Sbjct: 242 HNFVKISLTKNPKKRPTAERLLTHLF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 53.9 bits (130), Expect = 2e-09
 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 10/86 (11%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG-----VEWVQALFKIARGELPPIPDSVSRDARD 90
           GY +  D WS+G T  E L   RPY G      + ++A  + A       P + S +A D
Sbjct: 175 GYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETAD---VLYPATWSTEAID 231

Query: 91  FILKCLQVNPNDR--PTAAQLMEHPF 114
            I K L+ +P  R       L  HP+
Sbjct: 232 AINKLLERDPQKRLGDNLKDLKNHPY 257

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 53.5 bits (129), Expect = 2e-09
 Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 30/107 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI----------------------- 72
           Y  P DIWS+GC   EM+ R RP F G   +  LF+I                       
Sbjct: 177 YSTPVDIWSIGCIFAEMVNR-RPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKP 235

Query: 73  -----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
                AR +L  +  ++  D  D + K L  +P  R +A   ++HP+
Sbjct: 236 TFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPY 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 53.5 bits (128), Expect = 3e-09
 Identities = 27/80 (33%), Positives = 41/80 (51%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL 96
           Y   AD+WS+G  + E+LT  RP+ G    + + ++  G+  P P  VS   +  +   L
Sbjct: 248 YSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPLL 307

Query: 97  QVNPNDRPTAAQLMEHPFVK 116
             NP  RPT  QL+   F+K
Sbjct: 308 SKNPALRPTTQQLLHTEFLK 327

Length = 478

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 52.6 bits (126), Expect = 4e-09
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW-------VQALFKIARGELPPIPDS-VSRDA 88
           YG+ +D+WS+G + +E+     PY  ++        +Q L  I   + P +P    S   
Sbjct: 170 YGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKF 229

Query: 89  RDFILKCLQVNPNDRPTAAQLMEHPFV 115
             FI +C++  P +RP    LM+HPF+
Sbjct: 230 VHFITQCMRKQPKERPAPENLMDHPFI 256

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 52.3 bits (125), Expect = 5e-09
 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 2/81 (2%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDARDFILK 94
           Y    D+WS+G T +E+     P   +  ++ALFKI R   P +  P+  S +  DFI K
Sbjct: 206 YDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRK 265

Query: 95  CLQVNPNDRPTAAQLMEHPFV 115
           CL  +   RPT + L++H F+
Sbjct: 266 CLTKDYEKRPTVSDLLQHVFI 286

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 52.3 bits (126), Expect = 7e-09
 Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 34/127 (26%)

Query: 20  SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI------ 72
           +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G +++  L  I      
Sbjct: 172 TRWYRAPEIMLNSK--GYTKAIDIWSVGCILAEMLS-NRPLFPGKDYLHQLNLILGVLGT 228

Query: 73  -------------ARGEL------PPIPDS-----VSRDARDFILKCLQVNPNDRPTAAQ 108
                        AR  +      P +P +         A D + K L  NP+ R T  +
Sbjct: 229 PSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEE 288

Query: 109 LMEHPFV 115
            + HP++
Sbjct: 289 ALAHPYL 295

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 51.9 bits (125), Expect = 8e-09
 Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 30/106 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI------------------ARGEL 77
           Y  P D+WSVGC   E+  R RP F G      L KI                   R   
Sbjct: 183 YATPVDMWSVGCIFAELFRR-RPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSF 241

Query: 78  PP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
           P          +P+ +  +  D + K L  NP+ R +A + ++HP+
Sbjct: 242 PSYTPRSFKSFVPE-ICEEGLDLLKKMLTFNPHKRISAFEALQHPY 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 51.7 bits (124), Expect = 1e-08
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 6/86 (6%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           G+G   D WS+G  + +MLT   P+      + + KI +G+L  +P  ++ +ARD + K 
Sbjct: 176 GHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL-NLPPYLTPEARDLLKKL 234

Query: 96  LQVNPNDR-----PTAAQLMEHPFVK 116
           L+ NP+ R       AA++  HPF +
Sbjct: 235 LKRNPSSRLGAGPGDAAEVQSHPFFR 260

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 51.2 bits (123), Expect = 1e-08
 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWVQALFKI-ARGELPPIPDSVSRDARDFILKCLQVN 99
           D+W  G T+ EM T    P+ G+   Q L KI   GE    P++  +D  + +L+C   N
Sbjct: 182 DVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHN 241

Query: 100 PNDRPTAAQLME 111
           P DRPT A L E
Sbjct: 242 PADRPTFAALRE 253

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 7/86 (8%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE----LPPIPDSVSRDARDF 91
            YGL  D WS+G  + EML    P++     +   KI   +     PP P  VS +A D 
Sbjct: 206 PYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPP-VSPEAIDL 264

Query: 92  ILKCLQVNPNDRPTAA-QLMEHPFVK 116
           I + L  +P DR  +  ++  HPF K
Sbjct: 265 ICRLLC-DPEDRLGSFEEIKSHPFFK 289

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 50.8 bits (121), Expect = 2e-08
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG--VEWVQALFKIARGELPPIP-DSVSRDARDFI 92
           GY   +DIWS+GC + EM     P++G  +       KI + + PP+P +  S   R+ +
Sbjct: 182 GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELV 241

Query: 93  LKCLQVNPNDRP 104
             C+  +P+ RP
Sbjct: 242 SMCIYPDPDQRP 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 50.4 bits (120), Expect = 2e-08
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG--VEWVQALFKIARGELPPIP-DSVSRDARDFI 92
           GY   +DIWS+GC + EM     P++G  +       KI + + PP+P D  S + R  +
Sbjct: 182 GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV 241

Query: 93  LKCLQVNPNDRP 104
             C+  +P  RP
Sbjct: 242 NMCINPDPEKRP 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 50.2 bits (120), Expect = 3e-08
 Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 28/106 (26%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 178 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPS 237

Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
               AR +   +   +  D RD + + L  +PN R +A   + HPF
Sbjct: 238 FPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 50.4 bits (120), Expect = 3e-08
 Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 1/80 (1%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV-SRDARDFILKC 95
           Y   +DIWS+G T +EM     P   +  ++ALF I R   P +     S+   DFI  C
Sbjct: 203 YDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGC 262

Query: 96  LQVNPNDRPTAAQLMEHPFV 115
           L  N   RP+  QL++HPF+
Sbjct: 263 LVKNYLSRPSTEQLLKHPFI 282

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 50.1 bits (120), Expect = 3e-08
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 11/90 (12%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEW---VQALFKIARGELPPI--PDS---VSRD 87
           GY + +D+WS+G T+ E+ T   PY   +W      L ++ +G+ PPI         S  
Sbjct: 186 GYDVRSDVWSLGITLYEVATGKFPY--PKWNSVFDQLTQVVKGD-PPILSNSEEREFSPS 242

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
             +FI  CL  + + RP   +L+EHPF+K 
Sbjct: 243 FVNFINLCLIKDESKRPKYKELLEHPFIKD 272

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 50.3 bits (120), Expect = 4e-08
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 6/86 (6%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFK-IARGELPPIPDSVSRDARDFILK 94
           GY    D WS+G  V EM     P++  E  Q +++ IA G++    + +S + R F+  
Sbjct: 173 GYTKHVDFWSLGVLVFEMCCGWSPFYA-EDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKG 231

Query: 95  CLQVNPNDR----PTAAQLMEHPFVK 116
            L  NP  R      A +L EHPF  
Sbjct: 232 LLNRNPQHRLGAHRDAVELKEHPFFA 257

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 49.8 bits (119), Expect = 5e-08
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 21/114 (18%)

Query: 23  NSLTDQVVNS---------KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--------- 64
           NS+ D  V +         + G Y + +D+WS+G +++E+     P+             
Sbjct: 156 NSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDP 215

Query: 65  --WVQALFKIARGELPPIPDS-VSRDARDFILKCLQVNPNDRPTAAQLMEHPFV 115
              +  L +I +   P +P S    D RDF+  CL  +P +RPT  QL   P  
Sbjct: 216 MGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPF 269

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 49.1 bits (118), Expect = 6e-08
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 6/84 (7%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           GYG   D W++G  + EML    P+F    +Q   KI  G++   P   S DA+D I   
Sbjct: 174 GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKV-RFPSFFSPDAKDLIRNL 232

Query: 96  LQVNP-----NDRPTAAQLMEHPF 114
           LQV+      N +     +  HP+
Sbjct: 233 LQVDLTKRLGNLKNGVNDIKNHPW 256

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 48.9 bits (117), Expect = 8e-08
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G T+ E  +   +PY  ++  + +  +  GE  P P+   ++    +L C +  P
Sbjct: 180 DVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRP 239

Query: 101 NDRPTAAQL 109
            DRPT ++L
Sbjct: 240 EDRPTFSEL 248

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 48.6 bits (116), Expect = 9e-08
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 8/82 (9%)

Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSVSRDARDFILKCLQ 97
           D WS+GC + E L    P F  E   A+F  I    +     + +  S +A D I + L 
Sbjct: 175 DWWSLGCVIFEFLFGYPP-FHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLC 233

Query: 98  VNPNDRPTA---AQLMEHPFVK 116
           ++P  R  A    ++  HPF K
Sbjct: 234 MDPAKRLGANGYQEIKSHPFFK 255

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 49.0 bits (117), Expect = 9e-08
 Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 37/118 (31%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRP-----------YFGVEWVQ------------------ 67
           Y + +DIWS+G +++EM     P            FG    +                  
Sbjct: 175 YTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSP 234

Query: 68  ---ALFK----IARGELPPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
              A+F+    I     P +P    S + +DF+ KCL+ NP +R    +L +HPF+KR
Sbjct: 235 RPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR 292

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 48.9 bits (117), Expect = 9e-08
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 34/115 (29%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYF---------------------------GVEWVQ 67
             Y    D+WSVGC   EML R R  F                           G + V+
Sbjct: 187 PEYTTAIDMWSVGCIFAEMLGR-RQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVR 245

Query: 68  ALFKIARGELPPIPDSV-----SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
              +       P+P S      S +A D + + LQ +P +R T  Q ++HPF+ +
Sbjct: 246 KYIQ-NLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQ 299

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 47.6 bits (113), Expect = 3e-07
 Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 32/126 (25%)

Query: 19  VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-----RCRPYF------------ 61
           V+RW    + ++N  +  Y    DIWSVGC + EMLT     + + Y             
Sbjct: 176 VTRWYRAPEVILNWMH--YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV 233

Query: 62  -GVEWVQALFKIARGE----LPPIPD--------SVSRDARDFILKCLQVNPNDRPTAAQ 108
            G E+VQ L   A       LP  P           S  A D + K L+++ + R TA +
Sbjct: 234 PGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATE 293

Query: 109 LMEHPF 114
            +EHP+
Sbjct: 294 ALEHPY 299

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 47.3 bits (113), Expect = 4e-07
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 5/86 (5%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-PIPDSVSRDARDFILK 94
           G+G   D W++G  + EML    P+ G    +    I + E+  P    VS  ARD I K
Sbjct: 208 GHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRK 267

Query: 95  CLQVNPNDR----PTAAQLMEHPFVK 116
            L  +P+ R      AA++ +HPF +
Sbjct: 268 LLVKDPSKRLGSKRGAAEIKQHPFFR 293

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 46.3 bits (110), Expect = 6e-07
 Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 16/94 (17%)

Query: 24  SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGV---EWVQALFKIARGELPP 79
           SL D+V  SK       +D+W+ G T+ E+ TR + PY GV   E    L    R + P 
Sbjct: 186 SLADRVYTSK-------SDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPE 238

Query: 80  -IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
              D +     D +  C + +P DRPT  +L E 
Sbjct: 239 DCLDEL----YDLMYSCWRADPKDRPTFTKLREV 268

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 46.2 bits (109), Expect = 7e-07
 Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 1/72 (1%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  ++E++T  R PY G+   + +  + RG   P P++   +  + ++
Sbjct: 178 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMM 237

Query: 94  KCLQVNPNDRPT 105
           +C +  P +RPT
Sbjct: 238 RCWKNRPEERPT 249

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 45.8 bits (109), Expect = 1e-06
 Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 33/126 (26%)

Query: 19  VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIARGEL 77
           V+RW    + ++  +   Y    DIW +GC   EM TR RP   G   +  L  I +   
Sbjct: 188 VTRWYRPPELLLGERR--YTTAVDIWGIGCVFAEMFTR-RPILQGKSDIDQLHLIFKLCG 244

Query: 78  PPIPDS-----------------------------VSRDARDFILKCLQVNPNDRPTAAQ 108
            P  ++                             +  +  D + K L ++P  R TA+ 
Sbjct: 245 TPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASD 304

Query: 109 LMEHPF 114
            +EHP+
Sbjct: 305 ALEHPY 310

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E++T+ R PY G+   + L ++ RG   P P        + +L
Sbjct: 178 GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELML 237

Query: 94  KCLQVNPNDRPT 105
           +C + +P +RPT
Sbjct: 238 QCWKKDPEERPT 249

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 12/103 (11%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF--GVEWVQALFKIARGEL---PP 79
           +   +V   +GG+    D WS+G  + E+LT   P+   G +  QA  +I+R  L   PP
Sbjct: 173 MAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQA--EISRRILKSEPP 230

Query: 80  IPDSVSRDARDFILKCLQVNPNDR----PTAAQ-LMEHPFVKR 117
            P  +S  A+D I + L  +P  R    P+ A  + +HPF ++
Sbjct: 231 YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQK 273

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 30/110 (27%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYF-GV-----------------EWVQALFKIARG 75
           +G YG   DIW+VGC   E+L+   P F G                    V   F+ +R 
Sbjct: 173 DGYYGPKMDIWAVGCVFFEILS-LFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRH 231

Query: 76  -----------ELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
                       L  +  + S +  D + K L  +P++R TA Q + HP+
Sbjct: 232 MNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 32/109 (29%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR--G-----------ELP---- 78
           YG   D+WSVGC + E+    +P F G   ++ L KI    G           +LP    
Sbjct: 179 YGPEVDMWSVGCILAELFLG-KPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237

Query: 79  -----PIPDSV--------SRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
                P    +           A D + K L ++P  R +A Q ++H +
Sbjct: 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEY 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 44.8 bits (106), Expect = 2e-06
 Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 30/109 (27%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIARGELPP----------IPD--- 82
           Y  P DIWSVGC   EM+ + +P F G   +  LFKI R    P          +PD   
Sbjct: 181 YSTPVDIWSVGCIFAEMVNQ-KPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS 239

Query: 83  ---------------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
                          ++     D + K L+++P+ R TA   +EH + K
Sbjct: 240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFK 288

Length = 294

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 44.6 bits (106), Expect = 3e-06
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 32/107 (29%)

Query: 41  ADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-------------------ARG---EL 77
            DIWSVGC + E+LT  +  F G + +  L +I                   AR     L
Sbjct: 197 VDIWSVGCIMAELLTG-KTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSL 255

Query: 78  PPIPDS--------VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
           P +P           +  A D + K L ++P+ R TAA+ + HP++ 
Sbjct: 256 PQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLA 302

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 44.6 bits (105), Expect = 3e-06
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 13/99 (13%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF--GVEWVQALFKIARGEL---PPIPD 82
           +++  K GG+G   D WS+G  + E+LT   P+   G    Q+  +++R  L   PP P 
Sbjct: 176 EIIRGK-GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQS--EVSRRILKCDPPFPS 232

Query: 83  SVSRDARDFILKCLQVNPNDR-----PTAAQLMEHPFVK 116
            +  +A+D + K L+ +P  R       A+++ EHPF K
Sbjct: 233 FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFK 271

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 44.4 bits (105), Expect = 3e-06
 Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 27/105 (25%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR-------------------GEL 77
           Y  P DIWSVGC   EM  +   + G   +Q L  I +                    E 
Sbjct: 189 YSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEF 248

Query: 78  PPIP--------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
           P             +S +  D + K L+ +P  R +A   + HP+
Sbjct: 249 PQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPY 293

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 44.6 bits (105), Expect = 3e-06
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL 96
           Y    D WS G  + EML    P+ G +  + LF+  R + P  P  ++R+A+D ++K  
Sbjct: 173 YNTSVDWWSFGVLLYEMLIGQSPFHGHD-EEELFQSIRMDNPCYPRWLTREAKDILVKLF 231

Query: 97  QVNPNDR-PTAAQLMEHPFVKRPLPTSWG 124
              P  R      + +HPF +      W 
Sbjct: 232 VREPERRLGVKGDIRQHPFFRE---IDWS 257

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 44.3 bits (104), Expect = 4e-06
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 178 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 237

Query: 94  KCLQVNPNDRPT 105
           +C +  P +RPT
Sbjct: 238 QCWRKEPEERPT 249

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 44.0 bits (104), Expect = 5e-06
 Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 6/93 (6%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA----RGELPPIPDS 83
           Q +    G YG   D WS+G  + EML    P++    V+   KI       + PP    
Sbjct: 176 QAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTD 235

Query: 84  VSRDARDFILK--CLQVNPNDRPTAAQLMEHPF 114
           VS +A+D I +  C       R       +HPF
Sbjct: 236 VSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF 268

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 43.9 bits (104), Expect = 6e-06
 Identities = 34/127 (26%), Positives = 50/127 (39%), Gaps = 34/127 (26%)

Query: 19  VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI----- 72
           V+RW    + ++N     Y    D+WSVGC   E+L R +P F G ++V  L  I     
Sbjct: 170 VTRWYRAPELLLNCSE--YTTAIDVWSVGCIFAELLGR-KPLFPGKDYVHQLKLITELLG 226

Query: 73  --------------ARG---ELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAA 107
                         AR     LP  P           +  A D + K L  +P+ R T  
Sbjct: 227 SPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVE 286

Query: 108 QLMEHPF 114
           + + HP+
Sbjct: 287 EALAHPY 293

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 43.7 bits (103), Expect = 6e-06
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E++T  R PY G+   + +  + RG   P PD+   +  + + 
Sbjct: 178 GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMR 237

Query: 94  KCLQVNPNDRPT 105
            C +  P +RPT
Sbjct: 238 LCWKEKPEERPT 249

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 43.6 bits (103), Expect = 6e-06
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G +   +D+WS G  + EM T  + PY G+   +   +I  G   P P    ++    +L
Sbjct: 179 GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIML 238

Query: 94  KCLQVNPNDRPTAAQLME 111
           +C    P DRP+   L E
Sbjct: 239 ECWAAEPEDRPSFKALRE 256

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 43.2 bits (102), Expect = 8e-06
 Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 30/107 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR----------GELPPIPD--- 82
           Y  P DIWS+G    EM T+ +P F G   +  LF+I R            +  +PD   
Sbjct: 179 YSTPVDIWSIGTIFAEMATK-KPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKN 237

Query: 83  ---------------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
                          ++  D  D + K L  +P  R +A + + HP+
Sbjct: 238 TFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPY 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 41  ADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN 99
           +D+WS G TV E++T   +PY G+  V+    + +GE  P P   + D    ++KC  ++
Sbjct: 192 SDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMID 251

Query: 100 PNDRPTAAQLME 111
              RPT  +L+ 
Sbjct: 252 AESRPTFKELIN 263

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 42.7 bits (100), Expect = 1e-05
 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E++T+ R PY G+   + L ++ RG   P P        + + 
Sbjct: 178 GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMK 237

Query: 94  KCLQVNPNDRPT 105
            C + +P++RPT
Sbjct: 238 LCWKKDPDERPT 249

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 18/97 (18%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--------PIPDSV 84
           +   Y    D +++GCT+ EM+    P+      Q   K+ + EL           PD  
Sbjct: 167 QGEVYDFSVDWFALGCTLYEMIAGRSPF-----RQRKEKVEKEELKRRTLEMAVEYPDKF 221

Query: 85  SRDARDFILKCLQVNPNDR-----PTAAQLMEHPFVK 116
           S +A+D     LQ +P  R      +A ++ EHP  K
Sbjct: 222 SPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFK 258

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL 96
           Y    D WS G  + EML    P+ G E    LF     + P  P  +S++A+D + K  
Sbjct: 173 YNESVDWWSFGVLLYEMLIGQSPFHG-EDEDELFDSILNDRPHFPRWISKEAKDCLSKLF 231

Query: 97  QVNPNDR-PTAAQLMEHPFVKRPLPTSWGL 125
           + +P  R      + +HPF +      W  
Sbjct: 232 ERDPTKRLGVDGDIRQHPFFR---GIDWER 258

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 15/85 (17%)

Query: 42  DIWSVGCTVLEMLTRCRP----------YFGVEWVQ-ALFKIAR----GELPPIPDSVSR 86
           D+WS G T+ E+ T   P            G+   Q  + ++      GE  P P S   
Sbjct: 194 DVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPD 253

Query: 87  DARDFILKCLQVNPNDRPTAAQLME 111
           +  D +  C +  P DRP+ A L+ 
Sbjct: 254 EVYDLMKLCWEAEPQDRPSFADLIL 278

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 41  ADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN 99
           +D+WS G  + E++T  R PY G+   + L ++ +G   P P    ++  D +L C + +
Sbjct: 185 SDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKED 244

Query: 100 PNDRPT 105
           P+DRPT
Sbjct: 245 PDDRPT 250

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 7/75 (9%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI-----PDSVSRDA 88
           N GY    D WS+G  + E+LT   P+   +      +I    L        P+ + + A
Sbjct: 166 NKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP--MEIYNDILKGNGKLEFPNYIDKAA 223

Query: 89  RDFILKCLQVNPNDR 103
           +D I + L+ NP +R
Sbjct: 224 KDLIKQLLRRNPEER 238

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 32/115 (27%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR------------------ 74
              Y    D+WSVGC + E+L R +P F G ++V  L +I +                  
Sbjct: 184 FQSYTKAIDVWSVGCILAELLGR-KPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKA 242

Query: 75  -------GELPPIPDS-----VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
                    +P  P        +  A D + K L  +P  R +  + +EHP++  
Sbjct: 243 QNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAI 297

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 42.2 bits (99), Expect = 2e-05
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           GY    D W++G  + EMLT   P++  E V  +++    E    PD   RDA+D ++  
Sbjct: 169 GYTKAVDWWTLGVLLYEMLTGLPPFYD-ENVNEMYRKILQEPLRFPDGFDRDAKDLLIGL 227

Query: 96  LQVNPNDR---PTAAQLMEHPF 114
           L  +P  R     A ++  HPF
Sbjct: 228 LSRDPTRRLGYNGAQEIKNHPF 249

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 42.3 bits (99), Expect = 2e-05
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 8/89 (8%)

Query: 24  SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPD 82
           SL D+V  +K       +D+WS G T+ E+ TR + PY GVE  +    + +G     P 
Sbjct: 185 SLADRVYTTK-------SDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPP 237

Query: 83  SVSRDARDFILKCLQVNPNDRPTAAQLME 111
                    +  C  +NP DRP+   L  
Sbjct: 238 DCLDGLYSLMSSCWLLNPKDRPSFETLRC 266

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 42.2 bits (99), Expect = 2e-05
 Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 15/86 (17%)

Query: 41  ADIWSVGCTVLEMLTRCRPYFG--------VEWVQALFKIA-------RGELPPIPDSVS 85
           +D+WS G T+ E+LT C             +   Q    +        RG   P P +  
Sbjct: 191 SDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCP 250

Query: 86  RDARDFILKCLQVNPNDRPTAAQLME 111
           ++    +  C +     RPT   L+ 
Sbjct: 251 QEVYILMKNCWETEAKFRPTFRSLIP 276

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 13/96 (13%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQAL-FKIARG 75
           RW    SL D V  +K       +D+WS G  + EM T   +PY G+   + L F I  G
Sbjct: 186 RWMAPESLKDGVFTTK-------SDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGG 238

Query: 76  ELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLME 111
            L   P++      + +  C Q NP  RPT  +++ 
Sbjct: 239 HLDL-PENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 41.2 bits (96), Expect = 4e-05
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 41  ADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN 99
           +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC  ++
Sbjct: 192 SDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMID 251

Query: 100 PNDRPTAAQLME 111
              RP   +L++
Sbjct: 252 SECRPRFRELVD 263

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 41.2 bits (97), Expect = 4e-05
 Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 7/88 (7%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR-GELPPIPDSV--SRDARDFI 92
           GY    D WS+G  + EML    P+      +   KI    E    PD V  S +A+D I
Sbjct: 215 GYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLI 274

Query: 93  LKCLQVNPNDR---PTAAQLMEHPFVKR 117
            + L      R       ++  HPF K 
Sbjct: 275 KR-LCCEAERRLGNNGVNEIKSHPFFKG 301

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 41.3 bits (97), Expect = 5e-05
 Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 36/116 (31%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI--ARG-----------ELP---- 78
           Y    D+WSVGC   E+LT  +P F G   +  L +I    G           +LP    
Sbjct: 211 YHFAVDMWSVGCIFAELLTG-KPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTE 269

Query: 79  -------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLP 120
                        P       DA D +   L++NP +R +A + ++H  F   PLP
Sbjct: 270 FTPRKPKDLKTIFPNASD---DAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLP 322

Length = 335

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 41.1 bits (96), Expect = 5e-05
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 188 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 247

Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 248 WMIDADSRPKFRELI 262

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 41.1 bits (96), Expect = 5e-05
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 35  GGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G Y   +D+WS G TV EM++    PY G+   +    + +GE    P   + D    ++
Sbjct: 186 GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYMVMV 245

Query: 94  KCLQVNPNDRPTAAQL 109
           KC  ++ N RPT  +L
Sbjct: 246 KCWMIDENVRPTFKEL 261

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 40.8 bits (95), Expect = 6e-05
 Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 30/106 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF----------------GV----EWVQ--ALFKIAR 74
           Y  P D+WSVGC   EM  R +P F                G+    +W +  AL + A 
Sbjct: 186 YATPVDLWSVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF 244

Query: 75  GELPP------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
                      + D +    +D +LKCL  NP  R +A   + HP+
Sbjct: 245 HSKSAQPIEKFVTD-IDELGKDLLLKCLTFNPAKRISAYSALSHPY 289

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 40.7 bits (95), Expect = 7e-05
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL 96
           Y    D WS G  + EML    P+ G +    LF+  R + P  P  ++++++D + K  
Sbjct: 173 YTFSVDWWSFGVLLYEMLIGQSPFHGDD-EDELFESIRVDTPHYPRWITKESKDILEKLF 231

Query: 97  QVNPNDR-PTAAQLMEHPFVK 116
           + +P  R      +  HPF K
Sbjct: 232 ERDPTRRLGVVGNIRGHPFFK 252

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 40.7 bits (95), Expect = 7e-05
 Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 30/106 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI------------------ARGEL 77
           Y  P D+WSVGC   EM  R +P F G      L KI                   RG  
Sbjct: 184 YATPVDMWSVGCIFAEMFRR-KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAF 242

Query: 78  PP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
            P         +P+     A   +L+ L  NP+ R +A + ++HPF
Sbjct: 243 SPRGPRPVQSVVPEIEESGA-QLLLEMLTFNPHKRISAFRALQHPF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 40.5 bits (95), Expect = 8e-05
 Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 31/111 (27%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFG-----------VEWVQALFKIARGEL-------- 77
           Y    D+W+ GC   EMLT  +P F            +E V  + +  R EL        
Sbjct: 196 YTKAIDMWAAGCIFAEMLTG-KPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFV 254

Query: 78  --------PPIPD---SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
                    P+ D    V+ +A DF+ + L  NP DR TA + + HP++  
Sbjct: 255 RNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 40.3 bits (95), Expect = 9e-05
 Identities = 29/108 (26%), Positives = 42/108 (38%), Gaps = 31/108 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVE--------------------W--VQAL---FK 71
           Y    D+W+VGC   E+L    P F  E                    W  + +L    K
Sbjct: 178 YDPGVDLWAVGCIFAELL-NGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNK 236

Query: 72  IARGELPPIP-----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
           I   E  PIP        S +A D +   L  +P+ R +AA+ + HP+
Sbjct: 237 ITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPY 284

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 37  YGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELP-PIPDSVSRDARDFILK 94
           +   +D+WS G  + E+ T+   P++G+   + L ++  G+L  P+P+         + +
Sbjct: 195 FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTR 254

Query: 95  CLQVNPNDRPTAAQL 109
           C  VNP DRP+ ++L
Sbjct: 255 CWAVNPKDRPSFSEL 269

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 39.8 bits (93), Expect = 1e-04
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 4/78 (5%)

Query: 41  ADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN 99
           +D+W+ G  + E+ T    PY G++  Q    + +G     P+       + +  C Q N
Sbjct: 186 SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWN 245

Query: 100 PNDRPTAAQL---MEHPF 114
           P+DRP+ A++    E  F
Sbjct: 246 PSDRPSFAEIHQAFETMF 263

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 39.8 bits (93), Expect = 1e-04
 Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 33/109 (30%)

Query: 40  PA-DIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIARGELPPIPDSVSR----DARDFI- 92
           PA DIWS+GC   E+LT  +P F G   V  L  I      P P+++SR     AR ++ 
Sbjct: 187 PAIDIWSIGCIFAEVLTG-KPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLS 245

Query: 93  ---------------------LKCLQ----VNPNDRPTAAQLMEHPFVK 116
                                L+ L+     +P DRPTA + +  P+ K
Sbjct: 246 SMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFK 294

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL 96
           YG   D W++G  + EML    P+ G +  + LF+    +    P  +S++A+  +   L
Sbjct: 173 YGPAVDWWALGVLLYEMLAGQSPFEGDDEDE-LFQSILEDEVRYPRWLSKEAKSILKSFL 231

Query: 97  QVNPNDR----PTAAQ-LMEHPFVK 116
             NP  R    PT  Q +  HPF +
Sbjct: 232 TKNPEKRLGCLPTGEQDIKGHPFFR 256

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 15/100 (15%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG----------VEWVQALFKIARGEL 77
           +V+  K  GY    D WS+GC + E L    P+ G            W +   +    + 
Sbjct: 168 EVLRGK--GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYW-KETLQRPVYDD 224

Query: 78  PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           P    ++S +A D I K +        +   +  HPF K 
Sbjct: 225 PRF--NLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKE 262

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 32/125 (25%)

Query: 19  VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR--- 74
           V+ W    D ++ S+   Y    DIWSVGC + EM+T  RP F G      L KI R   
Sbjct: 162 VTLWYRAPDVLLGSRT--YSTSIDIWSVGCIMAEMITG-RPLFPGTNNEDQLLKIFRIMG 218

Query: 75  -----------------GELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAAQL 109
                               P  P                D + + LQ+NP  R +A   
Sbjct: 219 TPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDA 278

Query: 110 MEHPF 114
           ++HP+
Sbjct: 279 LQHPW 283

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 39.5 bits (92), Expect = 2e-04
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 16/106 (15%)

Query: 19  VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIARGEL 77
           V+RW    + ++N  +  Y    DIWSVGC + EMLT  +P F G + +  L +I +   
Sbjct: 177 VTRWYRAPEVILNWMH--YTQTVDIWSVGCIMAEMLTG-KPLFKGHDHLDQLMEIMKVTG 233

Query: 78  PPIPDSVSR----DARDFILKCLQVN--------PNDRPTAAQLME 111
            P  + V +    DA++++ K  +          PN  P A  ++E
Sbjct: 234 TPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLE 279

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 33/110 (30%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR-------------GELPPI-- 80
           Y    D+WSVGC   E+LT+ +P F G   +  L KI +              ELP    
Sbjct: 184 YSTAIDMWSVGCIFAELLTK-KPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKK 242

Query: 81  ----------------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
                             S+S +  D + + L  +P  R +A   ++HP+
Sbjct: 243 KTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 32/111 (28%), Positives = 41/111 (36%), Gaps = 34/111 (30%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQ-ALFKIARGELPPIPDS---VSR----- 86
           Y    D+W VGC   EM T  RP F G   V+  L KI R    P  ++   VS      
Sbjct: 181 YSTSLDMWGVGCIFYEMATG-RPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK 239

Query: 87  -----------------------DARDFILKCLQVNPNDRPTAAQLMEHPF 114
                                     +  LK LQ  P  R +AA+ M+HP+
Sbjct: 240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPY 290

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 30/125 (24%), Positives = 44/125 (35%), Gaps = 31/125 (24%)

Query: 19  VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR--- 74
           V+ W    D +  +K   Y    D+WS GC   E+    RP F G +    L +I R   
Sbjct: 161 VTLWYRPPDVLFGAK--LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 218

Query: 75  ----------GELPPIPDSVSRDA---------------RDFILKCLQVNPNDRPTAAQL 109
                      +LP         A               RD +   L  NP  R +A + 
Sbjct: 219 TPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEA 278

Query: 110 MEHPF 114
           ++HP+
Sbjct: 279 LQHPY 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 32/138 (23%), Positives = 52/138 (37%), Gaps = 45/138 (32%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L+ +V+     GY   +DI+SVG T  E+     P+  +   Q L +   G +P + D+ 
Sbjct: 175 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTT 234

Query: 85  -----------SRDARD----------------------------------FILKCLQVN 99
                      SR   +                                  F+ +CLQ N
Sbjct: 235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRN 294

Query: 100 PNDRPTAAQLMEHPFVKR 117
           P+ RP+A+ L+ H F K+
Sbjct: 295 PDARPSASTLLNHSFFKQ 312

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 38.9 bits (91), Expect = 3e-04
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)

Query: 41  ADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN 99
           +D+W  G  + E+L    +P+ GV+    + +I  GE  P+P +        + KC   +
Sbjct: 189 SDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 248

Query: 100 PNDRPTAAQL 109
           P+ RP   +L
Sbjct: 249 PSKRPRFTEL 258

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 38.9 bits (90), Expect = 3e-04
 Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E++T  + PY G+     +  + RG   P  ++   +  D + 
Sbjct: 179 GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMK 238

Query: 94  KCLQVNPNDRPT 105
            C +    +RPT
Sbjct: 239 TCWKEKAEERPT 250

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 15/86 (17%)

Query: 41  ADIWSVGCTVLEMLTRCR--------------PYFGVEWVQALFKIAR-GELPPIPDSVS 85
           +D+WS G T+ E+LT C               P  G   V  L ++   G+  P P +  
Sbjct: 193 SDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCP 252

Query: 86  RDARDFILKCLQVNPNDRPTAAQLME 111
            +    + KC +  P+ R T   L+E
Sbjct: 253 EEVYQLMRKCWEFQPSKRTTFQNLIE 278

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 38.7 bits (90), Expect = 4e-04
 Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 32/111 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-------------------------------GVEW 65
           Y +  DIWS GC   EML   +P F                                + +
Sbjct: 183 YDVEVDIWSAGCIFAEML-EGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRF 241

Query: 66  VQALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
           VQ+L K           +    A D + K L  +P  R +AA+ + HP++ 
Sbjct: 242 VQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLA 292

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 38.5 bits (89), Expect = 4e-04
 Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 7   EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV 66
           EG+ +A   K        L  +V+   +  YG   D W +G  + EM+    P++  +  
Sbjct: 144 EGITDAATMKTFCGTPEYLAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDH- 200

Query: 67  QALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDR-----PTAAQLMEHPF 114
           + LF++   E    P ++S DA+  +   L  +PN R       A ++M H F
Sbjct: 201 EKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSF 253

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 38.4 bits (89), Expect = 4e-04
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
           K+G +   +D+WS G  + E+ +   +PY G+   Q L  +  G     PD+      D 
Sbjct: 194 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 253

Query: 92  ILKCLQVNPNDRPTAAQLME 111
           +  C Q NP  RPT  +++ 
Sbjct: 254 MRMCWQFNPKMRPTFLEIVN 273

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 38.1 bits (89), Expect = 5e-04
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  + E++T  R PY G+   + L ++ RG   P P +   +  D +L+C   +P
Sbjct: 186 DVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDP 245

Query: 101 NDRPTAAQL 109
            +RPT   L
Sbjct: 246 EERPTFEYL 254

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 38.1 bits (88), Expect = 5e-04
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)

Query: 35  GGYGLPADIWSVGCTVLEM--LTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           G Y   +D+WS G  + E   L  C PY G+   QA  ++ +G     P     D    +
Sbjct: 169 GRYSSESDVWSYGILLWETFSLGVC-PYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVM 227

Query: 93  LKCLQVNPNDRPTAAQL 109
            +C    P +RP  ++L
Sbjct: 228 QRCWDYKPENRPKFSEL 244

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 37.9 bits (88), Expect = 6e-04
 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 20/83 (24%)

Query: 42  DIWSVGCTVLEMLT-----RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL 96
           D WS+G  + E+LT      C P            I       IP+ VS +AR  + + L
Sbjct: 164 DWWSLGAILFELLTGKTLVECHPS----------GINTHTTLNIPEWVSEEARSLLQQLL 213

Query: 97  QVNPNDRPTAA-----QLMEHPF 114
           Q NP +R  A       +  HPF
Sbjct: 214 QFNPTERLGAGVAGVEDIKSHPF 236

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 37.9 bits (88), Expect = 6e-04
 Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 1/74 (1%)

Query: 37  YGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+W+ G  + E+ +   +PY+G+   + ++ +  G +   PD+   +  + +  C
Sbjct: 209 YTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLC 268

Query: 96  LQVNPNDRPTAAQL 109
               P+DRP+ A +
Sbjct: 269 WSKLPSDRPSFASI 282

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 37.9 bits (88), Expect = 6e-04
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 8/92 (8%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD 87
           +VVN +  G+   AD WS G  + EMLT   P+ G +  + +  I + +L  +P  +S +
Sbjct: 168 EVVNRR--GHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL-GMPQFLSPE 224

Query: 88  ARDFILKCLQVNPNDRPTAA-----QLMEHPF 114
           A+  +    + NP +R  A      ++  HPF
Sbjct: 225 AQSLLRALFKRNPANRLGAGPDGVEEIKRHPF 256

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 37.7 bits (87), Expect = 6e-04
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
           K+G +   +D+WS G  + E+ T   +PY G+   Q L  +  G L   PD+      + 
Sbjct: 194 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLFEL 253

Query: 92  ILKCLQVNPNDRPTAAQLM 110
           +  C Q NP  RP+  +++
Sbjct: 254 MRMCWQYNPKMRPSFLEII 272

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 37.7 bits (87), Expect = 8e-04
 Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)

Query: 41  ADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN 99
           +D+WS G T+ E++T   +PY G+   +    + +GE  P P   + D    ++KC  ++
Sbjct: 192 SDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMID 251

Query: 100 PNDRPTAAQL 109
            + RP   +L
Sbjct: 252 ADSRPKFKEL 261

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 37.4 bits (86), Expect = 0.001
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 6/93 (6%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI----ARGELPPIPDS 83
           Q +    G YG   D WS+G  + EML    P++    V+   KI     R + P     
Sbjct: 176 QAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTD 235

Query: 84  VSRDARDFI--LKCLQVNPNDRPTAAQLMEHPF 114
           VS DA+D I  L C + +   +       +HPF
Sbjct: 236 VSEDAKDLIRRLICSREHRLGQNGIEDFKQHPF 268

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 37.4 bits (87), Expect = 0.001
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 6/86 (6%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL 96
           YG   D W+ G  + EML    P+ G E    LF+         P S+S++A       L
Sbjct: 178 YGKSVDWWAFGVLLYEMLAGQPPFDG-EDEDELFQSIMEHNVSYPKSLSKEAVSICKGLL 236

Query: 97  QVNPNDR----PTAAQ-LMEHPFVKR 117
             +P  R    PT  + + EH F +R
Sbjct: 237 TKHPAKRLGCGPTGERDIREHAFFRR 262

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 37.2 bits (86), Expect = 0.001
 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 7   EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEW 65
           +G  + L  KW      SL D V       Y   +D+W+ G T+ E++TR + PY GVE 
Sbjct: 171 QGCASKLPVKWLA--LESLADNV-------YTTHSDVWAFGVTMWEIMTRGQTPYAGVEN 221

Query: 66  VQALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQL 109
            +    + +G     P     D  + + +C    P  RP+   L
Sbjct: 222 SEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHL 265

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 37  YGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFILK 94
           Y + +D+WS G  + E+ +    PY GV+  +    ++  G     PD  + +    +L 
Sbjct: 258 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 317

Query: 95  CLQVNPNDRPTAAQLMEH 112
           C    P+ RPT ++L+EH
Sbjct: 318 CWHGEPSQRPTFSELVEH 335

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 36.7 bits (85), Expect = 0.002
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +V+ SK  G+G   D W++G  + E +    P+F     +   KI  G L   P+  
Sbjct: 182 LAPEVIQSK--GHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRL-KFPNWF 238

Query: 85  SRDARDFILKCLQVNPNDR 103
              ARD +   LQ +   R
Sbjct: 239 DGRARDLVKGLLQTDHTKR 257

Length = 329

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 78  PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           P +P  V   + +DF+ KCL  NP +R    QLM H F+KR
Sbjct: 264 PKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 304

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 78  PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           P +P+ V + D ++F+ KCL  NP +R     LM H F+KR
Sbjct: 266 PKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKR 306

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 36.7 bits (85), Expect = 0.002
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 31/109 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIARGELPPIPDS------------ 83
           YG   D+WS GC + E+ T+ +P F   + +  L  I+R    P P              
Sbjct: 195 YGPAIDVWSCGCILGELFTK-KPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNT 253

Query: 84  -----------------VSRDARDFILKCLQVNPNDRPTAAQLMEHPFV 115
                            +   A D +   L ++P+ R TA + +  P++
Sbjct: 254 MKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 36.8 bits (85), Expect = 0.002
 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 9/91 (9%)

Query: 24  SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALF-KIARGELPPIP 81
           S+ D+V  ++       +D+WS G  + E+ +    PY GV+  +    ++  G     P
Sbjct: 246 SIFDKVYTTQ-------SDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAP 298

Query: 82  DSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
           +  + +    +L C   NP DRPT ++L+E 
Sbjct: 299 EYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 32/125 (25%)

Query: 20  SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR--GEL 77
           +RW    + ++N  +  Y    DIWSVGC + E+LT    + G + +  L  I R  G  
Sbjct: 180 TRWYRAPEIMLNWMH--YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 237

Query: 78  PP-----IPDSVSRD-----------------------ARDFILKCLQVNPNDRPTAAQL 109
                  I    +R+                       A D + K L ++ + R TAAQ 
Sbjct: 238 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 297

Query: 110 MEHPF 114
           + H +
Sbjct: 298 LAHAY 302

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 7/87 (8%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP---PIPDSVSRDARDFI 92
           GY    D WSVG  + EML    P+     ++   K+   +     P    +S +A D I
Sbjct: 224 GYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLI 283

Query: 93  LKCLQVNPNDR---PTAAQLMEHPFVK 116
           +K L   P DR     A ++  HPF K
Sbjct: 284 IK-LCRGPEDRLGKNGADEIKAHPFFK 309

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI----ARGELPPIPDS 83
           Q +    G YG   D WS+G  + EML    P++    V+   KI     R + P     
Sbjct: 176 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITD 235

Query: 84  VSRDARDFI 92
           VS +A+D I
Sbjct: 236 VSEEAKDLI 244

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)

Query: 37  YGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIAR-GELPPIPDSVSRDARDFILK 94
           Y   +D+WS G  + E+ T    PY G+  V+ LFK+ + G     P + + +    + +
Sbjct: 213 YTHQSDVWSFGVLLWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTHELYMIMRE 271

Query: 95  CLQVNPNDRPTAAQLME 111
           C    P+ RPT  QL+E
Sbjct: 272 CWHAVPSQRPTFKQLVE 288

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 36.3 bits (84), Expect = 0.002
 Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 6/83 (7%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL 96
           YG   D W +G  + EM+    P++  +  + LF++   E    P ++S +A+  +   L
Sbjct: 172 YGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILMEEIRFPRTLSPEAKSLLAGLL 230

Query: 97  QVNPNDR-----PTAAQLMEHPF 114
           + +P  R       A ++MEH F
Sbjct: 231 KKDPKQRLGGGPEDAKEIMEHRF 253

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 36.0 bits (83), Expect = 0.003
 Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 10/93 (10%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG----VEWVQALFKIARGELPPIPDSVSRDA 88
           KN  Y    D W +GC + EM+    P+      V+  + + +  + +     +  S  A
Sbjct: 174 KNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR-EEVERRVKEDQEEYSEKFSEAA 232

Query: 89  RDFILKCLQVNPNDR-----PTAAQLMEHPFVK 116
           R    + L  +P  R       A ++  HPF +
Sbjct: 233 RSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFR 265

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 35.7 bits (82), Expect = 0.004
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 10/88 (11%)

Query: 24  SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIAR-GELPPIP 81
           SL D +  ++       +D+WS G  + E++T    PY G+   + LF + + G     P
Sbjct: 200 SLFDHIYTTQ-------SDVWSFGVLLWEIVTLGGNPYPGIA-PERLFNLLKTGYRMERP 251

Query: 82  DSVSRDARDFILKCLQVNPNDRPTAAQL 109
           ++ S +  + +L C +  P+ RPT A +
Sbjct: 252 ENCSEEMYNLMLTCWKQEPDKRPTFADI 279

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 35.5 bits (82), Expect = 0.004
 Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 41  ADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN 99
           +D+WS G  + E+ +  + PY      + +  ++ G     P     +    +  C    
Sbjct: 182 SDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEK 241

Query: 100 PNDRPTAAQLME 111
           P DRP   +L+ 
Sbjct: 242 PEDRPAFKKLLS 253

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 35.6 bits (82), Expect = 0.004
 Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 21/94 (22%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG----------VEWVQALFKIARGELPPIPDSVS 85
           GY    D WSVG  + EML    P+            + W   L   ++ +L       S
Sbjct: 220 GYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKL-------S 272

Query: 86  RDARDFILKCLQVNPNDR---PTAAQLMEHPFVK 116
           R+A D IL+ L     DR     A ++  HPF K
Sbjct: 273 REASDLILR-LCCGAEDRLGKNGADEIKAHPFFK 305

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 35.5 bits (82), Expect = 0.004
 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 35  GGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G Y   +D+WS G  + E  +    PY G+   Q   +I  G   P P     +    +L
Sbjct: 170 GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLML 229

Query: 94  KCLQVNPNDRPTAAQLME 111
           +C   +P +RP+ +++  
Sbjct: 230 QCWAYDPENRPSFSEIYN 247

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	135
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.92
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.92
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.92
KOG0578	550	consensus p21-activated serine/threonine protein k	99.91
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.91
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.91
KOG0605	550	consensus NDR and related serine/threonine kinases	99.89
KOG0610	459	consensus Putative serine/threonine protein kinase	99.89
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.89
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.88
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.88
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.87
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.87
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.86
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.86
PTZ00284	467	protein kinase; Provisional	99.86
KOG0198	313	consensus MEKK and related serine/threonine protei	99.85
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.85
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.84
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.84
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.84
PTZ00036	440	glycogen synthase kinase; Provisional	99.83
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.83
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.83
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.82
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.82
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.82
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.82
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.82
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.82
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.81
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.81
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.81
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.81
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.81
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.81
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.81
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.81
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.81
PTZ00283	496	serine/threonine protein kinase; Provisional	99.81
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.8
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.8
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.8
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.8
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.8
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.8
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.8
KOG0589	426	consensus Serine/threonine protein kinase [General	99.8
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.8
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.8
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.8
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.8
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.8
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.8
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.8
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.79
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.79
PTZ00267	478	NIMA-related protein kinase; Provisional	99.79
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.79
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.79
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.79
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.79
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.79
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.79
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.79
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.79
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.79
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.79
PHA02988	283	hypothetical protein; Provisional	99.79
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.79
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.79
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.79
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.79
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.78
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.78
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.78
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.78
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.78
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.78
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.78
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.78
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.78
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.78
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.78
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.77
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.77
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.77
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.77
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.77
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.77
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.77
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.77
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.77
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.77
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.77
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.77
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.77
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.77
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.76
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.76
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.76
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.76
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.76
KOG0584	632	consensus Serine/threonine protein kinase [General	99.76
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.76
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.76
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.76
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.76
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.76
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.76
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.76
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.76
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.76
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.76
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.76
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.76
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.76
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.76
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.75
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.75
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.75
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.75
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.75
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.75
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.75
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.75
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.75
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.75
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.75
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.75
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.75
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.75
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.75
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.75
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.75
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.75
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.75
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.75
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.75
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.74
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.74
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.74
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.74
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.74
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.74
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.74
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.74
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.74
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.74
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.74
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.74
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.74
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.74
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.74
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.73
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.73
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.73
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.73
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.73
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.73
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.73
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.73
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.73
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.73
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.73
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.73
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.73
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.73
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.73
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.73
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.73
PHA03212	391	serine/threonine kinase US3; Provisional	99.73
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.73
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.72
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.72
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.72
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.72
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.72
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.72
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.72
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.72
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.72
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.72
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.72
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.72
PHA03207	392	serine/threonine kinase US3; Provisional	99.72
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.72
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.72
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.72
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.72
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.72
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.72
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.72
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.72
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.72
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.72
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.71
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.71
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.71
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.71
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.71
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.71
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.71
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.71
PHA03211	461	serine/threonine kinase US3; Provisional	99.71
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.71
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.71
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.71
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.71
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.71
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.71
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.71
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.71
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.71
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.71
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.7
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.7
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.7
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.7
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.7
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.7
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.7
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.7
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.7
PLN00009	294	cyclin-dependent kinase A; Provisional	99.7
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.7
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.7
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.7
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.7
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.7
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.7
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.7
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.69
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.69
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.69
PHA03209	357	serine/threonine kinase US3; Provisional	99.69
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.69
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.69
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.69
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.69
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.69
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.69
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.69
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.69
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.69
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.69
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.69
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.69
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.69
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.69
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.68
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.68
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.68
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.68
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.68
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.68
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.68
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.68
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.68
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.68
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.68
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.68
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.68
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.68
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.68
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.68
PLN00181	793	protein SPA1-RELATED; Provisional	99.68
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.68
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.68
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.68
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.67
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.67
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.67
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.67
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.66
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.66
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.66
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.66
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.66
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.66
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.66
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.66
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.66
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.66
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.66
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.66
PHA03210	501	serine/threonine kinase US3; Provisional	99.66
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.65
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.65
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.65
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.65
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.65
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.65
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.65
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.65
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.65
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.65
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.65
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.65
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.64
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.64
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.64
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.64
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.64
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.64
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.64
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.63
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.63
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.63
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.63
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.63
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.63
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.63
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.63
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.63
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.63
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.63
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.63
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.63
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.63
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.62
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.62
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.62
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.62
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.62
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.62
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.62
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.62
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.62
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.62
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.61
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.61
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.61
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.61
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.61
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.61
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.6
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.6
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.6
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.6
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.6
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.59
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.59
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.59
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.59
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.59
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.59
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.58
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.58
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.58
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.58
PHA02882	294	putative serine/threonine kinase; Provisional	99.58
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.58
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.57
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.57
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.57
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.56
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.56
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.55
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.55
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.55
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.54
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.54
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.54
KOG0586	596	consensus Serine/threonine protein kinase [General	99.54
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.54
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.53
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.53
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.53
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.53
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.53
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.53
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.52
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.52
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.52
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.52
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.52
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.51
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.5
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.5
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.49
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.48
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.47
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.46
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.45
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.43
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.42
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.4
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.39
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.39
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.37
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.36
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.33
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.28
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.27
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.24
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.21
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.19
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.17
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.1
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.09
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.97
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	98.9
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	98.86
KOG3653	534	consensus Transforming growth factor beta/activin	98.76
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.74
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.68
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.61
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.59
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.56
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.43
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.3
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.22
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.14
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	98.02
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.97
KOG1152	772	consensus Signal transduction serine/threonine kin	97.85
KOG1266	458	consensus Protein kinase [Signal transduction mech	97.33
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.26
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	96.04
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	95.79
KOG1093	725	consensus Predicted protein kinase (contains TBC a	93.4
COG4248	637	Uncharacterized protein with protein kinase and he	87.17
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	82.44
KOG0576	829	consensus Mitogen-activated protein kinase kinase	80.49

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=1.7e-25  Score=157.65  Aligned_cols=109  Identities=30%  Similarity=0.545  Sum_probs=97.6

Q ss_pred             hhhhhhhhhhh-------hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC
Q 032711            5 TVEGLGNALRR-------KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL   77 (135)
Q Consensus         5 ~~~~~~~~~~~-------~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~   77 (135)
                      +|+|+|.+...       .+.|||+.|+|||++...  +++..+||||+||++|.|+.|++||...+-.+.+.+|....+
T Consensus       158 KIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~--gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y  235 (592)
T KOG0575|consen  158 KIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKS--GHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEY  235 (592)
T ss_pred             EecccceeeeecCcccccceecCCCcccChhHhccC--CCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCc
Confidence            36677765544       368999999999999865  789999999999999999999999999998999999887777


Q ss_pred             CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCC
Q 032711           78 PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        78 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~  116 (135)
                       ..|..++.++++||.++|..+|.+||++++++.|+||.
T Consensus       236 -~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~  273 (592)
T KOG0575|consen  236 -SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFK  273 (592)
T ss_pred             -ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhh
Confidence             67779999999999999999999999999999999994

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.92  E-value=2.1e-25  Score=149.57  Aligned_cols=108  Identities=28%  Similarity=0.529  Sum_probs=97.5

Q ss_pred             hhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----cHHHHHHHHHcCCCCCCCCc-ccHH
Q 032711           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-----EWVQALFKIARGELPPIPDS-VSRD   87 (135)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~-----~~~~~~~~i~~~~~~~~~~~-~~~~   87 (135)
                      ..++++||..|||||.+.+.  .|+.++||||+|..++|+..|+.|+...     +..+.+..|..+..+..|.. ++++
T Consensus       233 ~a~tfvGT~~YMsPERi~g~--~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~e  310 (364)
T KOG0581|consen  233 IANTFVGTSAYMSPERISGE--SYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPE  310 (364)
T ss_pred             hcccccccccccChhhhcCC--cCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHH
Confidence            45789999999999999985  7999999999999999999999998763     67889999999888888886 9999


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCC
Q 032711           88 ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSW  123 (135)
Q Consensus        88 ~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~  123 (135)
                      +++|+..||+.||.+|+++.|++.|||++.......
T Consensus       311 f~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~v  346 (364)
T KOG0581|consen  311 FRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPNV  346 (364)
T ss_pred             HHHHHHHHhcCCcccCCCHHHHhcCHHHhhcccccc
Confidence            999999999999999999999999999997655443

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.1e-25  Score=153.66  Aligned_cols=103  Identities=32%  Similarity=0.542  Sum_probs=93.8

Q ss_pred             hhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ..+++||+.|||||++...  .|+.++||||+|+..+||++|.+|+........++.|.+..++.+...+++.+++|+..
T Consensus       168 r~tfvGTPfwMAPEVI~~~--~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~  245 (467)
T KOG0201|consen  168 RKTFVGTPFWMAPEVIKQS--GYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEA  245 (467)
T ss_pred             cccccccccccchhhhccc--cccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHH
Confidence            3678999999999999964  79999999999999999999999999988877777788887777778899999999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      ||..+|..||++.++++|+|++...
T Consensus       246 CL~k~P~~RpsA~~LLKh~FIk~a~  270 (467)
T KOG0201|consen  246 CLDKNPEFRPSAKELLKHKFIKRAK  270 (467)
T ss_pred             HhhcCcccCcCHHHHhhhHHHHhcC
Confidence            9999999999999999999998743

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=9.6e-25  Score=152.78  Aligned_cols=106  Identities=35%  Similarity=0.612  Sum_probs=93.6

Q ss_pred             hhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHHH
Q 032711           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARDF   91 (135)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~l   91 (135)
                      ...+.+||+.|||||++...  .|+.++||||+|++.+||..|.+||.+.+....+..|.....+  ..+..+++.+++|
T Consensus       425 KR~TmVGTPYWMAPEVvtrk--~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdF  502 (550)
T KOG0578|consen  425 KRSTMVGTPYWMAPEVVTRK--PYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDF  502 (550)
T ss_pred             ccccccCCCCccchhhhhhc--ccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHH
Confidence            44578999999999999986  7999999999999999999999999998888877777665543  4467899999999


Q ss_pred             HHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           92 ILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      +.+||+.|+.+|+++.++|+||||....+.
T Consensus       503 L~~cL~~dv~~RasA~eLL~HpFl~~a~p~  532 (550)
T KOG0578|consen  503 LDRCLVVDVEQRASAKELLEHPFLKMAKPE  532 (550)
T ss_pred             HHHHhhcchhcCCCHHHHhcChhhhhcCCH
Confidence            999999999999999999999999776654

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=3.3e-24  Score=152.82  Aligned_cols=114  Identities=25%  Similarity=0.460  Sum_probs=100.6

Q ss_pred             hhhhhhhhhh------hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC
Q 032711            6 VEGLGNALRR------KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP   79 (135)
Q Consensus         6 ~~~~~~~~~~------~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~   79 (135)
                      |++||.+...      .+.||+++|.|||++.+. ...+.++||||+|+++|++++|+.||.+++....+.+++++.+ .
T Consensus       153 IADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~-pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f-~  230 (786)
T KOG0588|consen  153 IADFGMASLEVPGKLLETSCGSPHYAAPEIVSGR-PYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF-E  230 (786)
T ss_pred             eeccceeecccCCccccccCCCcccCCchhhcCC-CCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc-c
Confidence            5566655433      467999999999999997 3458899999999999999999999999999999999999987 6


Q ss_pred             CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           80 IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        80 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      .|..++.++.+|+++|+..||..|++.+++++|||+.+....
T Consensus       231 MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~  272 (786)
T KOG0588|consen  231 MPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSL  272 (786)
T ss_pred             CCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCC
Confidence            789999999999999999999999999999999999975543

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=1.2e-25  Score=152.74  Aligned_cols=114  Identities=27%  Similarity=0.384  Sum_probs=92.6

Q ss_pred             hhhhhhhhh------hhcccccccccchhhhhccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHHHcCCC
Q 032711            6 VEGLGNALR------RKWHVSRWNSLTDQVVNSKNGG-YGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIARGEL   77 (135)
Q Consensus         6 ~~~~~~~~~------~~~~~gt~~~~aPE~~~~~~~~-~~~~~dvws~G~~l~~l~~g~~p~~~~~~-~~~~~~i~~~~~   77 (135)
                      +.++|.+..      ..++|||+.|.|||++...+-. +..++|+||+||++|-+++|.+||.+... .....+|.++.+
T Consensus       320 ItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y  399 (475)
T KOG0615|consen  320 ITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRY  399 (475)
T ss_pred             ecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcc
Confidence            445555444      3578999999999999976422 34589999999999999999999987544 336677777776


Q ss_pred             C---CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           78 P---PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        78 ~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      .   ..+..++.++.++|.+||..||++|+++.++|+||||+...
T Consensus       400 ~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  400 AFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            3   45677899999999999999999999999999999999654

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.89  E-value=4.7e-23  Score=143.75  Aligned_cols=115  Identities=29%  Similarity=0.404  Sum_probs=94.1

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC---CCCCCcccHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDARDFI   92 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~li   92 (135)
                      .+.+|||-|||||++.+.  +|+..+|.||+||++|||+.|.+||.+.+..+...+|.....   .+.....+.++++||
T Consensus       346 ~StVGTPDYiAPEVll~k--gY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI  423 (550)
T KOG0605|consen  346 YSTVGTPDYIAPEVLLGK--GYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLI  423 (550)
T ss_pred             hcccCCccccchHHHhcC--CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHH
Confidence            457999999999999997  699999999999999999999999999999888888876542   233456779999999


Q ss_pred             HHhcccCCCCCCC---HHHHhhCcCCCCCCCCCCCCCCccccccc
Q 032711           93 LKCLQVNPNDRPT---AAQLMEHPFVKRPLPTSWGLPTPHHFIMQ  134 (135)
Q Consensus        93 ~~~l~~~p~~Rps---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  134 (135)
                      .+|+. ||.+|..   ++++.+||||++... ..-+..++.|+.|
T Consensus       424 ~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W-~~l~~~~apfvP~  466 (550)
T KOG0605|consen  424 TRLLC-DPENRLGSKGAEEIKKHPFFKGVDW-DHLREMPAPFVPQ  466 (550)
T ss_pred             HHHhc-CHHHhcCcccHHHHhcCCccccCCc-chhhcCCCCCCCC
Confidence            99999 9999974   889999999998544 3333344555443

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.89  E-value=6.3e-23  Score=139.59  Aligned_cols=115  Identities=29%  Similarity=0.384  Sum_probs=96.0

Q ss_pred             hhhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-CCCCCcccHHHHHH
Q 032711           13 LRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIPDSVSRDARDF   91 (135)
Q Consensus        13 ~~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~l   91 (135)
                      -+..+++||..|+|||++.+.  +++.++|.|.+|+++|||+.|..||.+.+..+.+..|..... .+-....+..+++|
T Consensus       290 ~RSnSFVGThEYlAPEvI~G~--GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDL  367 (459)
T KOG0610|consen  290 ARSNSFVGTHEYLAPEVIRGE--GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDL  367 (459)
T ss_pred             ccccccccccccccceeeecC--CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHH
Confidence            344578999999999999986  689999999999999999999999999999888888766544 22223567899999


Q ss_pred             HHHhcccCCCCCCC----HHHHhhCcCCCCCCCCCCCCCCcc
Q 032711           92 ILKCLQVNPNDRPT----AAQLMEHPFVKRPLPTSWGLPTPH  129 (135)
Q Consensus        92 i~~~l~~~p~~Rps----~~~~l~~~~~~~~~~~~~~~~~~~  129 (135)
                      |+++|.+||.+|..    +.++.+||||.+..+....-..|+
T Consensus       368 Ir~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP  409 (459)
T KOG0610|consen  368 IRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPP  409 (459)
T ss_pred             HHHHhccChhhhhccccchHHhhcCccccCCChhheeccCCC
Confidence            99999999999997    899999999998776544433343

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.89  E-value=1.1e-22  Score=131.05  Aligned_cols=99  Identities=26%  Similarity=0.479  Sum_probs=90.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC---CCCCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~li~   93 (135)
                      .++||++|||||++...  +|+..+|||+.|+++|-++.|.+||.+.+....+.+|.++.+   .+....+++++++|++
T Consensus       171 G~~GtP~fmaPEvvrkd--py~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~Lvr  248 (355)
T KOG0033|consen  171 GFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIR  248 (355)
T ss_pred             cccCCCcccCHHHhhcC--CCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHH
Confidence            46899999999999875  799999999999999999999999999888888899988776   2356778999999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      +||..||.+|+++.+.+.|||+..
T Consensus       249 rML~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  249 RMLTVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             HHhccChhhhccHHHHhCCchhcc
Confidence            999999999999999999999985

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.88  E-value=1.1e-22  Score=136.49  Aligned_cols=105  Identities=30%  Similarity=0.479  Sum_probs=94.6

Q ss_pred             hhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 032711           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL   93 (135)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~   93 (135)
                      .+.++|||+.|||||++...  +|+..+|.||+|+++|+|++|.+||.+.+....+..|.+++....+.-++.++++++.
T Consensus       181 ~t~tfcGT~eYmAPEil~~~--gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~  258 (357)
T KOG0598|consen  181 ATRTFCGTPEYMAPEILLGK--GYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLK  258 (357)
T ss_pred             ccccccCCccccChHHHhcC--CCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHH
Confidence            34568999999999999986  7999999999999999999999999999999999999988866667779999999999


Q ss_pred             HhcccCCCCCC----CHHHHhhCcCCCCCCC
Q 032711           94 KCLQVNPNDRP----TAAQLMEHPFVKRPLP  120 (135)
Q Consensus        94 ~~l~~~p~~Rp----s~~~~l~~~~~~~~~~  120 (135)
                      ++|..+|++|.    .+.++..||||..-..
T Consensus       259 ~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW  289 (357)
T KOG0598|consen  259 KLLKRDPRQRLGGPGDAEEIKRHPFFKGINW  289 (357)
T ss_pred             HHhccCHHHhcCCCCChHHhhcCcccccCCH
Confidence            99999999995    6788999999997544

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.88  E-value=1.8e-22  Score=141.17  Aligned_cols=104  Identities=28%  Similarity=0.457  Sum_probs=94.9

Q ss_pred             hhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ..+++||..|.+||++...  ..+..+|+|++||++|.|+.|.+||.+.+..-.+.+|....+ ..+..+++.+.+|+.+
T Consensus       244 ~~SFVGTAeYVSPElL~~~--~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y-~fp~~fp~~a~dLv~K  320 (604)
T KOG0592|consen  244 RSSFVGTAEYVSPELLNDS--PAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDY-EFPEGFPEDARDLIKK  320 (604)
T ss_pred             ccceeeeecccCHHHhcCC--CCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcc-cCCCCCCHHHHHHHHH
Confidence            3679999999999999875  678999999999999999999999999999989999887776 6778889999999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      +|..||..|++++++.+||||.+....
T Consensus       321 LLv~dp~~Rlt~~qIk~HpFF~~Vdw~  347 (604)
T KOG0592|consen  321 LLVRDPSDRLTSQQIKAHPFFEGVDWE  347 (604)
T ss_pred             HHccCccccccHHHHhhCcccccCChh
Confidence            999999999999999999999975553

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=3.1e-22  Score=143.04  Aligned_cols=107  Identities=23%  Similarity=0.351  Sum_probs=96.1

Q ss_pred             hhhhhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHH
Q 032711           11 NALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARD   90 (135)
Q Consensus        11 ~~~~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   90 (135)
                      ....+.++|||+-|||||++...  .|+..+|.|++|+++|||+.|..||.+++..+....|..... .+|..++.++.+
T Consensus       521 ~g~~TsTfCGTpey~aPEil~e~--~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~-~yP~~ls~ea~~  597 (694)
T KOG0694|consen  521 QGDRTSTFCGTPEFLAPEVLTEQ--SYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEV-RYPRFLSKEAIA  597 (694)
T ss_pred             CCCccccccCChhhcChhhhccC--cccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCC-CCCCcccHHHHH
Confidence            34466789999999999999985  799999999999999999999999999999999988887765 789999999999


Q ss_pred             HHHHhcccCCCCCCC-----HHHHhhCcCCCCCCC
Q 032711           91 FILKCLQVNPNDRPT-----AAQLMEHPFVKRPLP  120 (135)
Q Consensus        91 li~~~l~~~p~~Rps-----~~~~l~~~~~~~~~~  120 (135)
                      ++.++|..+|++|..     ++++..||||+....
T Consensus       598 il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w  632 (694)
T KOG0694|consen  598 IMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDW  632 (694)
T ss_pred             HHHHHhccCcccccCCCCCCchhhhhCCccccCCH
Confidence            999999999999985     478999999997543

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=5.4e-22  Score=136.28  Aligned_cols=107  Identities=27%  Similarity=0.469  Sum_probs=89.8

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC-----C----CcccH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI-----P----DSVSR   86 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~-----~----~~~~~   86 (135)
                      ++++||++|||||++..+..+|+.|+||||+|+..+|+.+|..||........+....++..+..     +    ..+++
T Consensus       188 ~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~k  267 (516)
T KOG0582|consen  188 NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSK  267 (516)
T ss_pred             ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcH
Confidence            67899999999999665556899999999999999999999999999988877766665554311     1    23466


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           87 DARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        87 ~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                      .+++++..||+.||.+||+++++++|+||+......
T Consensus       268 sf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~~  303 (516)
T KOG0582|consen  268 SFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSKE  303 (516)
T ss_pred             HHHHHHHHHhhcCcccCCCHHHHhccHHHhhccchh
Confidence            788999999999999999999999999999866543

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=3.5e-21  Score=133.39  Aligned_cols=103  Identities=29%  Similarity=0.457  Sum_probs=91.1

Q ss_pred             hhhcccccccccchhhhhccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcc-cHHHHHH
Q 032711           14 RRKWHVSRWNSLTDQVVNSKNGGY-GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV-SRDARDF   91 (135)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~-~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~l   91 (135)
                      ...+.+||+.|+|||++.+.. .| +.++||||+|+++|.|++|..||...+....+.+|.++.+ ..|..+ +.++..+
T Consensus       177 ~l~t~cGsp~Y~aPEvl~~~~-~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~-~~p~~~~S~~~~~L  254 (370)
T KOG0583|consen  177 LLKTFCGSPAYAAPEVLSGKG-TYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEF-KIPSYLLSPEARSL  254 (370)
T ss_pred             cccCCCCCcccCCHHHhCCCC-CcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCc-cCCCCcCCHHHHHH
Confidence            335679999999999999862 25 6889999999999999999999999888888888777766 667777 9999999


Q ss_pred             HHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           92 ILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      +.+|+..+|..|+++.+++.|+||...
T Consensus       255 i~~mL~~~P~~R~t~~~i~~h~w~~~~  281 (370)
T KOG0583|consen  255 IEKMLVPDPSTRITLLEILEHPWFQKE  281 (370)
T ss_pred             HHHHcCCCcccCCCHHHHhhChhhccC
Confidence            999999999999999999999999983

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=2.7e-21  Score=126.63  Aligned_cols=89  Identities=31%  Similarity=0.685  Sum_probs=82.1

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCC-CcccHHHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIP-DSVSRDARDFILK   94 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~li~~   94 (135)
                      .+.+|||.||+||++..+  +|+.++||||+||++|||+.-.+||.+.+..+.-.+|.++.++++| ..++.++.+++..
T Consensus       186 ~S~VGTPyYMSPE~i~~~--~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~  263 (375)
T KOG0591|consen  186 HSLVGTPYYMSPERIHES--GYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINM  263 (375)
T ss_pred             HhhcCCCcccCHHHHhcC--CCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHH
Confidence            357999999999999986  7999999999999999999999999999888888899999998888 6678999999999


Q ss_pred             hcccCCCCCCCH
Q 032711           95 CLQVNPNDRPTA  106 (135)
Q Consensus        95 ~l~~~p~~Rps~  106 (135)
                      |+..|++.||+.
T Consensus       264 ci~vd~~~RP~t  275 (375)
T KOG0591|consen  264 CIAVDPEQRPDT  275 (375)
T ss_pred             HccCCcccCCCc
Confidence            999999999983

>PTZ00284 protein kinase; Provisional

Probab=99.86  E-value=2.5e-21  Score=138.19  Aligned_cols=122  Identities=25%  Similarity=0.344  Sum_probs=87.9

Q ss_pred             hhhhhhhhhh----hhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--C
Q 032711            5 TVEGLGNALR----RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--P   78 (135)
Q Consensus         5 ~~~~~~~~~~----~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--~   78 (135)
                      ++.++|....    ....+||..|+|||++.+.  .|+.++||||+||++|+|++|+.||.+.+..+.+..+.....  +
T Consensus       288 kl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~--~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p  365 (467)
T PTZ00284        288 RICDLGGCCDERHSRTAIVSTRHYRSPEVVLGL--GWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLP  365 (467)
T ss_pred             EECCCCccccCccccccccCCccccCcHHhhcC--CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCC
Confidence            3456653322    2346899999999999875  689999999999999999999999987665444332211100  0


Q ss_pred             -----------------------C---------------C-CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           79 -----------------------P---------------I-PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        79 -----------------------~---------------~-~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                                             +               . .......+.+|+.+||.+||.+|+++.++++||||....
T Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~  445 (467)
T PTZ00284        366 SEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYY  445 (467)
T ss_pred             HHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccC
Confidence                                   0               0 000134567999999999999999999999999999877


Q ss_pred             CCCCCCCCc
Q 032711          120 PTSWGLPTP  128 (135)
Q Consensus       120 ~~~~~~~~~  128 (135)
                      +.....|..
T Consensus       446 ~~~~~~~~~  454 (467)
T PTZ00284        446 PECRQHPNY  454 (467)
T ss_pred             CccccCCCC
Confidence            766555543

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.85  E-value=2.9e-22  Score=134.99  Aligned_cols=103  Identities=42%  Similarity=0.690  Sum_probs=85.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHcCC-CCCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWVQALFKIARGE-LPPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~-~~~~~~~~~i~~~~-~~~~~~~~~~~~~~li~~   94 (135)
                      .+.||+.|||||++... ......+||||+||++.||++|++||.. ......+..+.... .+.+|..++.++++|+.+
T Consensus       180 ~~~Gtp~~maPEvi~~g-~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~  258 (313)
T KOG0198|consen  180 SVQGTPNYMAPEVIRNG-EVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRK  258 (313)
T ss_pred             cccCCccccCchhhcCC-CcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHH
Confidence            46899999999999852 1223589999999999999999999987 45555555554433 467888999999999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      |+..+|..||++++++.|||......
T Consensus       259 C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  259 CFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             HhhcCcccCcCHHHHhhChhhhcccc
Confidence            99999999999999999999987555

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.85  E-value=2.9e-22  Score=141.65  Aligned_cols=106  Identities=22%  Similarity=0.430  Sum_probs=91.8

Q ss_pred             hhhhhhhhhhh------cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-C
Q 032711            6 VEGLGNALRRK------WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-P   78 (135)
Q Consensus         6 ~~~~~~~~~~~------~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-~   78 (135)
                      |.+||......      .|+||..|||||++.+.  ....|+||||+|+|||||++|..||.+.+...+++.+..... .
T Consensus       253 IsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrne--PcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~L  330 (904)
T KOG4721|consen  253 ISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNE--PCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHL  330 (904)
T ss_pred             eccccchHhhhhhhhhhhhhhhHhhhCHHHhhcC--CcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccc
Confidence            56676655543      47999999999999986  789999999999999999999999999888878777665544 5


Q ss_pred             CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCc
Q 032711           79 PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHP  113 (135)
Q Consensus        79 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~  113 (135)
                      +.|..+++.++-|+..||.-.|.+||++.+++.|-
T Consensus       331 pvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl  365 (904)
T KOG4721|consen  331 PVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL  365 (904)
T ss_pred             cCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence            77889999999999999999999999999999874

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.84  E-value=5.3e-21  Score=125.76  Aligned_cols=103  Identities=28%  Similarity=0.432  Sum_probs=92.6

Q ss_pred             hhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      +-+.|||+-|+|||++...  +|+..+|.|++|+++|||+.|.+||...+....+.+|..+.. ..|.-++.++++|+.+
T Consensus       198 T~TlCGTPeYLAPEii~sk--~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v-~fP~~fs~~~kdLl~~  274 (355)
T KOG0616|consen  198 TWTLCGTPEYLAPEIIQSK--GYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV-KFPSYFSSDAKDLLKK  274 (355)
T ss_pred             EEEecCCccccChHHhhcC--CCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc-cCCcccCHHHHHHHHH
Confidence            3467999999999999986  799999999999999999999999999999999999998877 6788899999999999


Q ss_pred             hcccCCCCCC-----CHHHHhhCcCCCCCCC
Q 032711           95 CLQVNPNDRP-----TAAQLMEHPFVKRPLP  120 (135)
Q Consensus        95 ~l~~~p~~Rp-----s~~~~l~~~~~~~~~~  120 (135)
                      +|+.|-.+|.     ...++..|+||+....
T Consensus       275 LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W  305 (355)
T KOG0616|consen  275 LLQVDLTKRFGNLKNGVEDIKNHPWFKGVDW  305 (355)
T ss_pred             HHhhhhHhhhcCcCCCccccccCcccccccH
Confidence            9999999994     4578999999996443

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=1.8e-20  Score=129.61  Aligned_cols=115  Identities=27%  Similarity=0.447  Sum_probs=94.5

Q ss_pred             hhhhhhhhhhhc------ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--
Q 032711            6 VEGLGNALRRKW------HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--   77 (135)
Q Consensus         6 ~~~~~~~~~~~~------~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--   77 (135)
                      ++|+|.+.....      .+.|.+|.|||+++.. +.|+.++|+|++||+++|+.+-++.|.+.++.+++.+|+.-..  
T Consensus       151 iaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs-~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP  229 (538)
T KOG0661|consen  151 IADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRS-GYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTP  229 (538)
T ss_pred             ecccccccccccCCCcchhhhcccccchHHhhhc-cccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCC
Confidence            566766555433      5899999999999986 5899999999999999999999999999999999988865211  


Q ss_pred             -------------------CC--------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           78 -------------------PP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        78 -------------------~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                                         +.        +-...+.++.+++.+|+.+||.+||++.++++||||....+.
T Consensus       230 ~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~~  300 (538)
T KOG0661|consen  230 DKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRAS  300 (538)
T ss_pred             ccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccccc
Confidence                               00        112367889999999999999999999999999999975553

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=5.5e-21  Score=135.77  Aligned_cols=117  Identities=32%  Similarity=0.549  Sum_probs=100.1

Q ss_pred             hhhhhhhhh---hhcccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCC
Q 032711            6 VEGLGNALR---RKWHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIP   81 (135)
Q Consensus         6 ~~~~~~~~~---~~~~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~   81 (135)
                      +++||.+..   .++|+||++||||||+..- .+.|+.++||||+|+.+.|+...++|+++.+-...+.+|.....+.++
T Consensus       167 LaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLq  246 (948)
T KOG0577|consen  167 LADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ  246 (948)
T ss_pred             eccccchhhcCchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCC
Confidence            445555443   4679999999999999842 257999999999999999999999999999999999999888776554


Q ss_pred             -CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           82 -DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        82 -~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                       ..++..+..|+..||..-|..||+.++++.|+|+....+..
T Consensus       247 s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~t  288 (948)
T KOG0577|consen  247 SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPPT  288 (948)
T ss_pred             CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCch
Confidence             45788899999999999999999999999999998766643

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.83  E-value=1.7e-20  Score=133.00  Aligned_cols=104  Identities=22%  Similarity=0.376  Sum_probs=81.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC-------------------C
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE-------------------L   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~-------------------~   77 (135)
                      ..+||+.|+|||++.+. ..++.++|+||+||++|+|++|.+||.+....+.+..+....                   .
T Consensus       229 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~  307 (440)
T PTZ00036        229 SYICSRFYRAPELMLGA-TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKF  307 (440)
T ss_pred             cCCCCcCccCHHHhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccC
Confidence            35789999999998764 368999999999999999999999998876655544432210                   0


Q ss_pred             C---------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           78 P---------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        78 ~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      +         ..+...+.++.+|+.+||..+|.+|+++.+++.||||......
T Consensus       308 ~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~~  360 (440)
T PTZ00036        308 PDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDP  360 (440)
T ss_pred             CccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhcc
Confidence            0         0123456789999999999999999999999999999875543

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=1.8e-20  Score=134.34  Aligned_cols=103  Identities=37%  Similarity=0.598  Sum_probs=91.4

Q ss_pred             hcccccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARD   90 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~   90 (135)
                      .+++||++|||||++...   ...|+.++||||+|+.+.+|..+.+|....+....+.+|.+...+  ..|..++..+.+
T Consensus       188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~D  267 (1187)
T KOG0579|consen  188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSD  267 (1187)
T ss_pred             ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHH
Confidence            468999999999988753   346999999999999999999999999999998888888876654  347788899999


Q ss_pred             HHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           91 FILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        91 li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      |+.+||..||..||++.++++|||+.+.
T Consensus       268 fLk~cL~Knp~~Rp~aaqll~Hpfv~~~  295 (1187)
T KOG0579|consen  268 FLKRCLVKNPRNRPPAAQLLKHPFVQNA  295 (1187)
T ss_pred             HHHHHHhcCCccCCCHHHHhhCcccccC
Confidence            9999999999999999999999999863

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.83  E-value=4.3e-20  Score=127.35  Aligned_cols=106  Identities=21%  Similarity=0.409  Sum_probs=86.0

Q ss_pred             hhhhhhhhhhhh-------cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH-cCC
Q 032711            5 TVEGLGNALRRK-------WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA-RGE   76 (135)
Q Consensus         5 ~~~~~~~~~~~~-------~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~-~~~   76 (135)
                      +++|||.+....       ...||+.|||||++.+....|+.++||||+|+++||+++|+.||.+.........+. .+.
T Consensus       184 KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~  263 (362)
T KOG0192|consen  184 KIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGL  263 (362)
T ss_pred             EECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC
Confidence            356666553332       268999999999999532479999999999999999999999999988755555544 455


Q ss_pred             CCCCCCcccHHHHHHHHHhcccCCCCCCCHHHHh
Q 032711           77 LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLM  110 (135)
Q Consensus        77 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l  110 (135)
                      .+..+...++.+..++.+||..+|..||++.+++
T Consensus       264 Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~  297 (362)
T KOG0192|consen  264 RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIV  297 (362)
T ss_pred             CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence            5667778999999999999999999999998875

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=5.4e-20  Score=123.40  Aligned_cols=106  Identities=26%  Similarity=0.345  Sum_probs=84.8

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC-------------------
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE-------------------   76 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~-------------------   76 (135)
                      +..+-|.+|.|||.+... ..|+...||||+||++.||++|++.|.+.+...++..|..-.                   
T Consensus       185 TeYVaTRWYRAPElll~~-~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~y  263 (359)
T KOG0660|consen  185 TEYVATRWYRAPELLLNS-SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPY  263 (359)
T ss_pred             hcceeeeeecCHHHHhcc-ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHH
Confidence            345779999999999875 589999999999999999999999998877666555443211                   


Q ss_pred             ------CCCC-----CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           77 ------LPPI-----PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        77 ------~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                            .+..     -...++.+.+|+.+||..||.+|+|+++++.|||+...-...
T Consensus       264 i~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~  320 (359)
T KOG0660|consen  264 IKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPE  320 (359)
T ss_pred             HHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCc
Confidence                  0111     135678899999999999999999999999999999755443

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.82  E-value=1.9e-20  Score=122.53  Aligned_cols=101  Identities=26%  Similarity=0.469  Sum_probs=86.4

Q ss_pred             hcccccccccchhhhhcc----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC---CCCCcccHHH
Q 032711           16 KWHVSRWNSLTDQVVNSK----NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP---PIPDSVSRDA   88 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~----~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~   88 (135)
                      +..|||++|+|||.+..+    ..+|+..+|.|++|+++|.++.|.+||-.....-.+..|..+.+.   +.+.+.+...
T Consensus       180 relCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~  259 (411)
T KOG0599|consen  180 RELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATV  259 (411)
T ss_pred             HHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccH
Confidence            346999999999988742    357899999999999999999999999766665666677777763   4456788899


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhhCcCCC
Q 032711           89 RDFILKCLQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        89 ~~li~~~l~~~p~~Rps~~~~l~~~~~~  116 (135)
                      +++|.+||+.||.+|.+++++++||||.
T Consensus       260 KdLIsrlLqVdp~~Ritake~LaHpff~  287 (411)
T KOG0599|consen  260 KDLISRLLQVDPTKRITAKEALAHPFFI  287 (411)
T ss_pred             HHHHHHHHeeCchhcccHHHHhcChHHH
Confidence            9999999999999999999999999994

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=3.3e-20  Score=130.24  Aligned_cols=103  Identities=17%  Similarity=0.288  Sum_probs=94.4

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      .++||+..|-|||++.+. ..-.+++||||+|+++|.+.+|++||...+..+.+.+|..+.+ .+|..+++++++||..|
T Consensus       176 ~TsCGSLAYSAPEILLGD-sYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY-tvPshvS~eCrdLI~sM  253 (864)
T KOG4717|consen  176 TTSCGSLAYSAPEILLGD-SYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY-TVPSHVSKECRDLIQSM  253 (864)
T ss_pred             hcccchhhccCchhhhcC-ccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc-cCchhhhHHHHHHHHHH
Confidence            468999999999999986 2346789999999999999999999999999999999998888 78999999999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      |..||.+|.+.+++..++|+.....
T Consensus       254 LvRdPkkRAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  254 LVRDPKKRASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             HhcCchhhccHHHHhccccccCCCC
Confidence            9999999999999999999986544

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=9.5e-20  Score=122.89  Aligned_cols=98  Identities=29%  Similarity=0.397  Sum_probs=84.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+|++.|+|||++.+.  .++.++||||+|+++|+|++|..||.+.+.......+..+.. ..+...+..+.+++.+||
T Consensus       157 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~l  233 (291)
T cd05612         157 TLCGTPEYLAPEVIQSK--GHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL-EFPRHLDLYAKDLIKKLL  233 (291)
T ss_pred             cccCChhhcCHHHHcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc-CCCccCCHHHHHHHHHHc
Confidence            35799999999999775  578999999999999999999999988877776666665543 456667889999999999


Q ss_pred             ccCCCCCCC-----HHHHhhCcCCCC
Q 032711           97 QVNPNDRPT-----AAQLMEHPFVKR  117 (135)
Q Consensus        97 ~~~p~~Rps-----~~~~l~~~~~~~  117 (135)
                      ..||.+|++     +++++.|+||..
T Consensus       234 ~~dp~~R~~~~~~~~~~~l~h~~~~~  259 (291)
T cd05612         234 VVDRTRRLGNMKNGADDVKNHRWFKS  259 (291)
T ss_pred             CCCHHHccCCccCCHHHHhcCccccC
Confidence            999999995     999999999975

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.82  E-value=1.5e-19  Score=125.53  Aligned_cols=103  Identities=30%  Similarity=0.531  Sum_probs=91.4

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC---CCCCCcccHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDARDFI   92 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~li   92 (135)
                      ...+||+.|+|||++...  .|+..+|+||+|+++|.|++|.+||.+.........+..+.+   ......++..+.+++
T Consensus       196 ~~~~Gtp~y~APEvl~~~--~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i  273 (382)
T KOG0032|consen  196 HTIVGTPEYVAPEVLGGR--PYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFI  273 (382)
T ss_pred             eeecCCccccCchhhcCC--CCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHH
Confidence            357999999999999864  699999999999999999999999999998888888887765   234567799999999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      .+++..||..|+++.++++|||+.....
T Consensus       274 ~~ll~~dp~~R~ta~~~L~HpWi~~~~~  301 (382)
T KOG0032|consen  274 RKLLEFDPRKRLTAAQALQHPWIKSIGE  301 (382)
T ss_pred             HHhcccCcccCCCHHHHhcCccccCCcc
Confidence            9999999999999999999999998633

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.82  E-value=3.6e-20  Score=126.65  Aligned_cols=98  Identities=23%  Similarity=0.454  Sum_probs=84.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++++|++|..||.+.+.......+..... ..+..++.++.+++.+||
T Consensus       154 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~li~~~L  230 (323)
T cd05571         154 TFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLSPEAKSLLAGLL  230 (323)
T ss_pred             ceecCccccChhhhcCC--CCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHc
Confidence            45799999999999764  689999999999999999999999988776666555554433 566778999999999999


Q ss_pred             ccCCCCCC-----CHHHHhhCcCCCC
Q 032711           97 QVNPNDRP-----TAAQLMEHPFVKR  117 (135)
Q Consensus        97 ~~~p~~Rp-----s~~~~l~~~~~~~  117 (135)
                      ..||.+|+     ++.+++.|+||..
T Consensus       231 ~~dP~~R~~~~~~~~~~ll~h~~f~~  256 (323)
T cd05571         231 KKDPKQRLGGGPEDAKEIMEHRFFAS  256 (323)
T ss_pred             cCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence            99999999     8999999999986

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.81  E-value=2e-20  Score=117.57  Aligned_cols=98  Identities=24%  Similarity=0.251  Sum_probs=73.5

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH-HHHHHHHcCCCCC------CCCcccH--HH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV-QALFKIARGELPP------IPDSVSR--DA   88 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~-~~~~~i~~~~~~~------~~~~~~~--~~   88 (135)
                      ..||+.|+|||++.+.  .++.++||||+|+++|++++|+.||...... ..+..+.......      .+.....  .+
T Consensus        64 ~~g~~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (176)
T smart00750       64 SRVDPYFMAPEVIQGQ--SYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSF  141 (176)
T ss_pred             CCCcccccChHHhcCC--CCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhH
Confidence            3689999999999875  6899999999999999999999999765432 2222222211111      1112233  68


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           89 RDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        89 ~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      .+++.+||..+|.+||++.+++.|+|+..
T Consensus       142 ~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      142 ADFMRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             HHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence            99999999999999999999999988753

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.81  E-value=6.9e-20  Score=125.56  Aligned_cols=99  Identities=26%  Similarity=0.428  Sum_probs=85.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      +.+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+.......+..+.. ..+..++..+.+++.+||
T Consensus       174 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~li~~~L  250 (329)
T PTZ00263        174 TLCGTPEYLAPEVIQSK--GHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRL-KFPNWFDGRARDLVKGLL  250 (329)
T ss_pred             eecCChhhcCHHHHcCC--CCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCc-CCCCCCCHHHHHHHHHHh
Confidence            45799999999999875  578999999999999999999999988877766666665543 556678899999999999


Q ss_pred             ccCCCCCCC-----HHHHhhCcCCCCC
Q 032711           97 QVNPNDRPT-----AAQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rps-----~~~~l~~~~~~~~  118 (135)
                      ..||.+|++     +.+++.||||...
T Consensus       251 ~~dP~~R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        251 QTDHTKRLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             hcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence            999999986     7999999999863

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.81  E-value=1.2e-19  Score=124.04  Aligned_cols=99  Identities=23%  Similarity=0.369  Sum_probs=85.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++|++++|..||.+.+.......+..... ..+..++.++.+++.+||
T Consensus       155 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~L  231 (320)
T cd05590         155 TFCGTPDYIAPEILQEM--LYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV-VYPTWLSQDAVDILKAFM  231 (320)
T ss_pred             ccccCccccCHHHHcCC--CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC-CCCCCCCHHHHHHHHHHc
Confidence            45799999999999764  688999999999999999999999998887777766665543 456678899999999999


Q ss_pred             ccCCCCCCCH------HHHhhCcCCCCC
Q 032711           97 QVNPNDRPTA------AQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rps~------~~~l~~~~~~~~  118 (135)
                      ..||.+|+++      ++++.|+||...
T Consensus       232 ~~dP~~R~~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         232 TKNPTMRLGSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             ccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence            9999999998      899999999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.81  E-value=1.6e-19  Score=121.42  Aligned_cols=97  Identities=31%  Similarity=0.472  Sum_probs=77.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC-----------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP-----------------   79 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~-----------------   79 (135)
                      ...|++.|+|||++...  .++.++|+||+|+++|++++|.+||.+.+..+.+..+......+                 
T Consensus       168 ~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  245 (290)
T cd07862         168 SVVVTLWYRAPEVLLQS--SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH  245 (290)
T ss_pred             cccccccccChHHHhCC--CCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhcc
Confidence            45789999999999764  68889999999999999999999998877665555443211100                 


Q ss_pred             ---------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           80 ---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        80 ---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                               ....++..+.+++.+||..+|++||++.++++||||
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         246 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             CCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence                     012356778999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.81  E-value=1.3e-19  Score=124.15  Aligned_cols=104  Identities=26%  Similarity=0.317  Sum_probs=77.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc----------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR----------------------   74 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~----------------------   74 (135)
                      ..+||..|+|||++......++.++||||+|+++++|++|+.||.+.+.......+..                      
T Consensus       165 ~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  244 (338)
T cd07859         165 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYL  244 (338)
T ss_pred             CCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHH
Confidence            3578999999999875323688999999999999999999999976554322211100                      


Q ss_pred             -----CCCCC---CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           75 -----GELPP---IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        75 -----~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                           .....   .....+..+.+++.+||..+|.+||++++++.||||.....
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         245 SSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             HhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence                 00000   01235677899999999999999999999999999987444

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.81  E-value=7.6e-20  Score=129.32  Aligned_cols=101  Identities=23%  Similarity=0.408  Sum_probs=88.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      .+-||+.|||||.+...  .|+..+|+||+||++||+..|++||...........|..+.. ..|...+..+.+|+..+|
T Consensus       159 sikGtPlYmAPElv~e~--pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v-~~p~~~S~~f~nfl~gLL  235 (808)
T KOG0597|consen  159 SIKGTPLYMAPELVEEQ--PYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPV-KPPSTASSSFVNFLQGLL  235 (808)
T ss_pred             eccCcccccCHHHHcCC--CccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCC-CCcccccHHHHHHHHHHh
Confidence            35799999999999975  799999999999999999999999988776666666665554 567788999999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      ..||.+|.+..+++.|||.++.+.
T Consensus       236 ~kdP~~RltW~~Ll~HpF~k~~~~  259 (808)
T KOG0597|consen  236 IKDPAQRLTWTDLLGHPFWKGKIN  259 (808)
T ss_pred             hcChhhcccHHHHhcChHHhhhhh
Confidence            999999999999999999987654

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=1.1e-19  Score=123.74  Aligned_cols=99  Identities=27%  Similarity=0.490  Sum_probs=84.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++++|++|..||.+.+.......+..... ..+..++..+.+++.+||
T Consensus       152 ~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L  228 (312)
T cd05585         152 TFCGTPEYLAPELLLGH--GYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL-RFPDGFDRDAKDLLIGLL  228 (312)
T ss_pred             cccCCcccCCHHHHcCC--CCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC-CCCCcCCHHHHHHHHHHc
Confidence            45799999999999874  689999999999999999999999988777666666655443 556778899999999999


Q ss_pred             ccCCCCCC---CHHHHhhCcCCCCC
Q 032711           97 QVNPNDRP---TAAQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rp---s~~~~l~~~~~~~~  118 (135)
                      ..+|.+|+   ++.+++.||||...
T Consensus       229 ~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         229 SRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             CCCHHHcCCCCCHHHHHcCCCcCCC
Confidence            99999997   47899999999964

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.81  E-value=4e-19  Score=117.45  Aligned_cols=97  Identities=24%  Similarity=0.572  Sum_probs=83.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...|++.|+|||+..+.  .++.++|+|++|++++++++|+.||...+.......+..+..+..+...+..+.+++.+|+
T Consensus       161 ~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  238 (257)
T cd08223         161 TLIGTPYYMSPELFSNK--PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATML  238 (257)
T ss_pred             cccCCcCccChhHhcCC--CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHh
Confidence            35688999999998764  5788999999999999999999999877766665566666555566778899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCC
Q 032711           97 QVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~  115 (135)
                      ..+|.+||++.+++.||||
T Consensus       239 ~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         239 SKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             ccCcccCCCHHHHhcCCCC
Confidence            9999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.81  E-value=1.7e-19  Score=121.16  Aligned_cols=97  Identities=26%  Similarity=0.376  Sum_probs=75.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC--------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE--------------------   76 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~--------------------   76 (135)
                      ...|+..|+|||++.+.  .++.++|+||+|+++|++++|+.||.+.+..+....+....                    
T Consensus       160 ~~~~~~~y~aPE~~~~~--~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T cd07848         160 EYVATRWYRSPELLLGA--PYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL  237 (287)
T ss_pred             ccccccccCCcHHHcCC--CCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccc
Confidence            35789999999999764  58899999999999999999999998766544333221100                    


Q ss_pred             -CCC----------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           77 -LPP----------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        77 -~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                       .+.          ....++..+.+++.+||..+|.+|+++++++.||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence             000          011256779999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.81  E-value=2e-19  Score=129.23  Aligned_cols=100  Identities=25%  Similarity=0.444  Sum_probs=88.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      +.+||+.|+|||++...  .++.++||||+|+++|++++|+.||.+.+..+.+..+..+...+.+..++.++.+++.+||
T Consensus       204 ~~~Gt~~Y~aPE~~~~~--~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  281 (496)
T PTZ00283        204 TFCGTPYYVAPEIWRRK--PYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALL  281 (496)
T ss_pred             cccCCcceeCHHHhCCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence            46799999999999874  6899999999999999999999999988877777777766666677788999999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      ..+|.+||++.+++.|+|+...
T Consensus       282 ~~dP~~RPs~~ell~~p~~~~~  303 (496)
T PTZ00283        282 SSDPKRRPSSSKLLNMPICKLF  303 (496)
T ss_pred             ccChhhCcCHHHHHhCHHHHHh
Confidence            9999999999999999987653

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.80  E-value=2.8e-19  Score=121.16  Aligned_cols=108  Identities=28%  Similarity=0.433  Sum_probs=80.2

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHHHc--CCC-----------C---C-
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIAR--GEL-----------P---P-   79 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~-~~~~~~i~~--~~~-----------~---~-   79 (135)
                      ..|++.|+|||++.+. ..++.++|+||+|+++++|++|..||.+... .+.+..+..  +..           .   + 
T Consensus       163 ~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (303)
T cd07869         163 EVVTLWYRPPDVLLGS-TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE  241 (303)
T ss_pred             CcccCCCCChHHHcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence            4678999999998764 3578899999999999999999999976543 222222211  000           0   0 


Q ss_pred             -----CC---------CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCCC
Q 032711           80 -----IP---------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP  126 (135)
Q Consensus        80 -----~~---------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~~  126 (135)
                           .+         ...+..+.+++.+||+.||.+|+++.+++.||||....+..|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~~~~~~~  302 (303)
T cd07869         242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPPRLWELT  302 (303)
T ss_pred             cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCChhhhhcc
Confidence                 00         123467889999999999999999999999999998777666654

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.80  E-value=5.9e-19  Score=121.98  Aligned_cols=106  Identities=31%  Similarity=0.543  Sum_probs=82.1

Q ss_pred             cccccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCc---HHHHHHHHHcCCCCCCCCcccHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WVQALFKIARGELPPIPDSVSRDARD   90 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~   90 (135)
                      ..+||..|+|||++...   +...+.++|||++|+++|++++|+.||....   .......+........+..++.++.+
T Consensus       227 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  306 (353)
T PLN00034        227 SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRH  306 (353)
T ss_pred             ccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHH
Confidence            45799999999988532   1123568999999999999999999996432   23333334334444556678899999


Q ss_pred             HHHHhcccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           91 FILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        91 li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                      ++.+||..+|.+||++.++++|+||.......
T Consensus       307 li~~~l~~~P~~Rpt~~ell~hp~~~~~~~~~  338 (353)
T PLN00034        307 FISCCLQREPAKRWSAMQLLQHPFILRAQPGQ  338 (353)
T ss_pred             HHHHHccCChhhCcCHHHHhcCcccccCCccc
Confidence            99999999999999999999999999975543

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.80  E-value=4.3e-19  Score=123.04  Aligned_cols=103  Identities=23%  Similarity=0.353  Sum_probs=78.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC-----------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP-----------------   79 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~-----------------   79 (135)
                      ...||..|+|||++.+.  .++.++|+||+|+++|+|++|+.||.+.+..+....+......+                 
T Consensus       184 ~~~~t~~y~aPE~~~~~--~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (364)
T cd07875         184 PYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE  261 (364)
T ss_pred             CCcccCCcCCHHHHhCC--CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHh
Confidence            35789999999999874  68999999999999999999999998766544443332110000                 


Q ss_pred             ------------------------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           80 ------------------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        80 ------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                                              ........+.+++.+||..||.+||++.++++||||..+...
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~~  327 (364)
T cd07875         262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP  327 (364)
T ss_pred             hCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccCc
Confidence                                    001124578899999999999999999999999999865443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.80  E-value=2.5e-19  Score=122.29  Aligned_cols=99  Identities=22%  Similarity=0.416  Sum_probs=84.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+|+..|+|||++.+.  .++.++|+||+|++++++++|..||.+.+.......+..... ..+..++..+.+++.+||
T Consensus       155 ~~~g~~~y~aPE~~~~~--~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~l  231 (318)
T cd05570         155 TFCGTPDYIAPEILSYQ--PYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEV-RYPRWLSKEAKSILKSFL  231 (318)
T ss_pred             ceecCccccCHHHhcCC--CCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC-CCCCcCCHHHHHHHHHHc
Confidence            45789999999999764  688999999999999999999999988776666655554433 456678899999999999


Q ss_pred             ccCCCCCCCH-----HHHhhCcCCCCC
Q 032711           97 QVNPNDRPTA-----AQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rps~-----~~~l~~~~~~~~  118 (135)
                      ..+|.+|+++     .+++.|+||+..
T Consensus       232 ~~dP~~R~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         232 TKNPEKRLGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             cCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            9999999999     999999999874

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.80  E-value=2.5e-19  Score=122.20  Aligned_cols=99  Identities=21%  Similarity=0.409  Sum_probs=83.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++++|++|..||.+.+.......+.... +..+...+.++.+++.+||
T Consensus       155 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l  231 (316)
T cd05620         155 TFCGTPDYIAPEILQGL--KYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDT-PHYPRWITKESKDILEKLF  231 (316)
T ss_pred             ccCCCcCccCHHHHcCC--CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHc
Confidence            46799999999999874  68999999999999999999999998877666555554333 3456678899999999999


Q ss_pred             ccCCCCCCCH-HHHhhCcCCCCC
Q 032711           97 QVNPNDRPTA-AQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rps~-~~~l~~~~~~~~  118 (135)
                      ..||.+|+++ ++++.|+||...
T Consensus       232 ~~dP~~R~~~~~~~~~h~~f~~~  254 (316)
T cd05620         232 ERDPTRRLGVVGNIRGHPFFKTI  254 (316)
T ss_pred             cCCHHHcCCChHHHHcCCCcCCC
Confidence            9999999997 578899999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.80  E-value=3.3e-19  Score=121.89  Aligned_cols=99  Identities=24%  Similarity=0.392  Sum_probs=85.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+|++.|+|||++.+.  .++.++|+||+|+++|+|++|+.||.+.+..+....+..... ..+..++..+.+++.+||
T Consensus       160 ~~~g~~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~li~~~L  236 (324)
T cd05589         160 TFCGTPEFLAPEVLTET--SYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV-RYPRFLSREAISIMRRLL  236 (324)
T ss_pred             ccccCccccCHhHhcCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHh
Confidence            46799999999999764  688999999999999999999999988877777666655543 456678899999999999


Q ss_pred             ccCCCCCC-----CHHHHhhCcCCCCC
Q 032711           97 QVNPNDRP-----TAAQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rp-----s~~~~l~~~~~~~~  118 (135)
                      ..+|.+|+     ++.+++.|+||...
T Consensus       237 ~~dP~~R~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         237 RRNPERRLGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             hcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence            99999999     68899999999863

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=3.6e-20  Score=133.84  Aligned_cols=103  Identities=36%  Similarity=0.747  Sum_probs=87.6

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHH-cCCCCCCCCcccHHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WVQALFKIA-RGELPPIPDSVSRDARDFIL   93 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~-~~~~~~~i~-~~~~~~~~~~~~~~~~~li~   93 (135)
                      -++.||.-|||||++.....+|+..+||||+||.+.||.+|++||.... ....++++. ....+++|..++.++++||.
T Consensus       734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~Fil  813 (1226)
T KOG4279|consen  734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFIL  813 (1226)
T ss_pred             cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHH
Confidence            3678999999999998766789999999999999999999999996543 344455442 22336788999999999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      +|+.++|..||++.+++..||+...
T Consensus       814 rcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  814 RCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             HHcCCCcccCccHHHhccCcccccC
Confidence            9999999999999999999999864

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.80  E-value=1.8e-19  Score=124.96  Aligned_cols=101  Identities=27%  Similarity=0.479  Sum_probs=94.4

Q ss_pred             hhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 032711           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL   93 (135)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~   93 (135)
                      ...+++||+.|++||.+.+.  .|+.++|+|++||++|||++-+++|.+.+......+|......+.+...+.++..++.
T Consensus       162 ~a~tvvGTp~YmcPEil~d~--pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~  239 (426)
T KOG0589|consen  162 LASTVVGTPYYMCPEILSDI--PYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVK  239 (426)
T ss_pred             hhheecCCCcccCHHHhCCC--CCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHH
Confidence            34467999999999999985  7999999999999999999999999999999999999999988999999999999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~  116 (135)
                      .|+..+|..||++.+++.+|.+.
T Consensus       240 ~~l~~~P~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  240 SMLRKNPEHRPSALELLRRPHLL  262 (426)
T ss_pred             HHhhcCCccCCCHHHHhhChhhh
Confidence            99999999999999999998766

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=4.6e-20  Score=123.37  Aligned_cols=104  Identities=23%  Similarity=0.390  Sum_probs=90.9

Q ss_pred             hhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 032711           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL   93 (135)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~   93 (135)
                      ...++|||+.|+|||++..+  .|+..+|.|.+|+|+|||++|+.||.+.+....+..|..+.. ..|..++++++.|+.
T Consensus       324 t~kTFCGTPEYLAPEVleDn--DYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~-kFPr~ls~eAktLLs  400 (516)
T KOG0690|consen  324 TTKTFCGTPEYLAPEVLEDN--DYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDL-KFPRTLSPEAKTLLS  400 (516)
T ss_pred             eeccccCChhhcCchhhccc--cccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhc-cCCccCCHHHHHHHH
Confidence            34579999999999999986  699999999999999999999999988887777766666554 678899999999999


Q ss_pred             HhcccCCCCCCC-----HHHHhhCcCCCCCCC
Q 032711           94 KCLQVNPNDRPT-----AAQLMEHPFVKRPLP  120 (135)
Q Consensus        94 ~~l~~~p~~Rps-----~~~~l~~~~~~~~~~  120 (135)
                      .+|..||.+|..     +.++++|+||.....
T Consensus       401 GLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W  432 (516)
T KOG0690|consen  401 GLLKKDPKKRLGGGPDDAKEIMRHRFFASVDW  432 (516)
T ss_pred             HHhhcChHhhcCCCchhHHHHHhhhhhccCCH
Confidence            999999999974     678999999997544

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.80  E-value=1.2e-20  Score=125.16  Aligned_cols=103  Identities=33%  Similarity=0.528  Sum_probs=89.5

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARDFIL   93 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li~   93 (135)
                      +++.||+.|||||++..-  +|+.++||||+|+...||..|++||.+-.....++.|.....+  .-|...+.++.+|++
T Consensus       187 NTVIGTPFWMAPEVI~EI--GY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~  264 (502)
T KOG0574|consen  187 NTVIGTPFWMAPEVIEEI--GYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIR  264 (502)
T ss_pred             CccccCcccccHHHHHHh--ccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHH
Confidence            468999999999999985  6999999999999999999999999888777777777655443  235567889999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      .||..+|++|-++.++++|+|+++...
T Consensus       265 ~CLiK~PE~R~TA~~L~~H~FiknA~g  291 (502)
T KOG0574|consen  265 SCLIKKPEERKTALRLCEHTFIKNAPG  291 (502)
T ss_pred             HHhcCCHHHHHHHHHHhhhhhhcCCCc
Confidence            999999999999999999999998654

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.80  E-value=2.2e-19  Score=115.07  Aligned_cols=100  Identities=26%  Similarity=0.462  Sum_probs=91.4

Q ss_pred             hhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ..+.|||.-|.+||++.+.  .++..+|+|++|++.||++.|.+||......+.+.+|.+... ..|..++.++.++|.+
T Consensus       179 R~tlcgt~dyl~pEmv~~~--~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~-~~p~~is~~a~dlI~~  255 (281)
T KOG0580|consen  179 RKTLCGTLDYLPPEMVEGR--GHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDL-KFPSTISGGAADLISR  255 (281)
T ss_pred             ceeeecccccCCHhhcCCC--CccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccc-cCCcccChhHHHHHHH
Confidence            3568999999999999986  689999999999999999999999999888888888877766 5678899999999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      |+..+|.+|....+++.|||+..
T Consensus       256 ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  256 LLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             HhccCccccccHHHHhhhHHHHh
Confidence            99999999999999999999865

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.80  E-value=2.4e-19  Score=122.60  Aligned_cols=99  Identities=28%  Similarity=0.522  Sum_probs=86.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++...  .++.++||||+|+++|+|++|+.||...+.......+..+.. ..+..++..+.+++.+||
T Consensus       159 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l  235 (323)
T cd05584         159 TFCGTIEYMAPEILMRS--GHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL-NLPPYLTPEARDLLKKLL  235 (323)
T ss_pred             ccCCCccccChhhccCC--CCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHc
Confidence            35799999999999764  578899999999999999999999998887777766666544 566778899999999999


Q ss_pred             ccCCCCCC-----CHHHHhhCcCCCCC
Q 032711           97 QVNPNDRP-----TAAQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rp-----s~~~~l~~~~~~~~  118 (135)
                      ..+|.+|+     ++++++.|+||...
T Consensus       236 ~~~p~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         236 KRNPSSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             ccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence            99999999     89999999999753

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.80  E-value=2.3e-19  Score=123.60  Aligned_cols=99  Identities=22%  Similarity=0.395  Sum_probs=85.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      +.+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+.......+..... ..+...+..+.+++.+|+
T Consensus       187 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~li~~~l  263 (340)
T PTZ00426        187 TLCGTPEYIAPEILLNV--GHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII-YFPKFLDNNCKHLMKKLL  263 (340)
T ss_pred             eecCChhhcCHHHHhCC--CCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC-CCCCCCCHHHHHHHHHHc
Confidence            46799999999999764  578999999999999999999999998877666666665543 456678899999999999


Q ss_pred             ccCCCCCC-----CHHHHhhCcCCCCC
Q 032711           97 QVNPNDRP-----TAAQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rp-----s~~~~l~~~~~~~~  118 (135)
                      ..+|.+|+     +++++++||||...
T Consensus       264 ~~dp~~R~~~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        264 SHDLTKRYGNLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             ccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            99999995     89999999999864

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=8e-19  Score=119.44  Aligned_cols=111  Identities=29%  Similarity=0.422  Sum_probs=88.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC-CCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-PIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~li~~~   95 (135)
                      ..+|+..|+|||++.+.  .++.++|+||+|+++|++++|..||.+.+....+..+...... +.....+..+.+++.+|
T Consensus       191 ~~~g~~~y~aPE~~~~~--~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  268 (316)
T cd05574         191 SFVGTEEYIAPEVISGD--GHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKL  268 (316)
T ss_pred             CCcCccCCcCHHHHcCC--CCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHH
Confidence            45789999999999764  5789999999999999999999999887776666555443321 22223688999999999


Q ss_pred             cccCCCCCCC----HHHHhhCcCCCCCCCCCCCCCCcc
Q 032711           96 LQVNPNDRPT----AAQLMEHPFVKRPLPTSWGLPTPH  129 (135)
Q Consensus        96 l~~~p~~Rps----~~~~l~~~~~~~~~~~~~~~~~~~  129 (135)
                      +..+|.+||+    +++++.|+||+...........|+
T Consensus       269 l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~~~~~~~~  306 (316)
T cd05574         269 LVKDPSKRLGSKRGAAEIKQHPFFRGVNWALIRHTTPP  306 (316)
T ss_pred             ccCCHhHCCCchhhHHHHHcCchhhcCChhhcccCCCC
Confidence            9999999999    999999999998766555554443

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.80  E-value=2.7e-19  Score=122.19  Aligned_cols=98  Identities=20%  Similarity=0.362  Sum_probs=85.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||..|+|||++...  .++.++|+||+|+++|+|++|+.||...+.......+..... ..+..++.++.+++.+||
T Consensus       155 ~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~ll~~~L  231 (321)
T cd05591         155 TFCGTPDYIAPEILQEL--EYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV-LYPVWLSKEAVSILKAFM  231 (321)
T ss_pred             ccccCccccCHHHHcCC--CCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHh
Confidence            45789999999999764  689999999999999999999999998887777777665543 455668899999999999


Q ss_pred             ccCCCCCC-------CHHHHhhCcCCCC
Q 032711           97 QVNPNDRP-------TAAQLMEHPFVKR  117 (135)
Q Consensus        97 ~~~p~~Rp-------s~~~~l~~~~~~~  117 (135)
                      ..+|.+|+       ++++++.||||..
T Consensus       232 ~~dp~~R~~~~~~~~~~~~~~~hp~~~~  259 (321)
T cd05591         232 TKNPNKRLGCVASQGGEDAIKQHPFFKE  259 (321)
T ss_pred             ccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence            99999999       8999999999976

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.79  E-value=4.9e-19  Score=120.78  Aligned_cols=100  Identities=22%  Similarity=0.408  Sum_probs=84.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||..|+|||++.+.  .++.++|+||+|+++|++++|..||.+.+..+....+.... +..+..++.++.+++.+||
T Consensus       155 ~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~l  231 (316)
T cd05619         155 TFCGTPDYIAPEILLGQ--KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN-PCYPRWLTREAKDILVKLF  231 (316)
T ss_pred             eecCCccccCHHHHcCC--CCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCCccCCHHHHHHHHHHh
Confidence            45789999999999764  68999999999999999999999998877666665554443 2455668889999999999


Q ss_pred             ccCCCCCCCHH-HHhhCcCCCCCC
Q 032711           97 QVNPNDRPTAA-QLMEHPFVKRPL  119 (135)
Q Consensus        97 ~~~p~~Rps~~-~~l~~~~~~~~~  119 (135)
                      ..+|.+|+++. +++.||||....
T Consensus       232 ~~~P~~R~~~~~~l~~h~~~~~~~  255 (316)
T cd05619         232 VREPERRLGVKGDIRQHPFFREID  255 (316)
T ss_pred             ccCHhhcCCChHHHHcCcccCCCC
Confidence            99999999996 899999998743

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.79  E-value=8.6e-19  Score=115.74  Aligned_cols=97  Identities=26%  Similarity=0.447  Sum_probs=84.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...|+..|+|||+....  .++.++|+|++|++++++++|+.||...+.......+..+.....+...+..+.+++.+|+
T Consensus       160 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  237 (256)
T cd08529         160 TIVGTPYYLSPELCEDK--PYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCL  237 (256)
T ss_pred             ccccCccccCHHHhcCC--CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHc
Confidence            34688899999999874  5789999999999999999999999888776666666666665666678899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCC
Q 032711           97 QVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~  115 (135)
                      +.+|++||++.+++.|+|+
T Consensus       238 ~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         238 TKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             cCCcccCcCHHHHhhCCCC
Confidence            9999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.79  E-value=3.8e-19  Score=127.34  Aligned_cols=98  Identities=30%  Similarity=0.464  Sum_probs=86.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++...  .++.++||||+|+++++|++|..||.+.+..+.+..+..+...+.+..++.++.+++.+||
T Consensus       230 ~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L  307 (478)
T PTZ00267        230 SFCGTPYYLAPELWERK--RYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPLL  307 (478)
T ss_pred             ccCCCccccCHhHhCCC--CCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHHHHHHHh
Confidence            45799999999999764  6899999999999999999999999888877777777766665667778899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~  116 (135)
                      ..+|..||++.+++.|+|+.
T Consensus       308 ~~dP~~Rps~~~~l~~~~~~  327 (478)
T PTZ00267        308 SKNPALRPTTQQLLHTEFLK  327 (478)
T ss_pred             ccChhhCcCHHHHHhCHHHH
Confidence            99999999999999998875

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.79  E-value=2.6e-19  Score=122.70  Aligned_cols=99  Identities=23%  Similarity=0.436  Sum_probs=84.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++|++++|..||.+.+.......+..... ..+..++.++.+++.+||
T Consensus       154 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~li~~~L  230 (328)
T cd05593         154 TFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI-KFPRTLSADAKSLLSGLL  230 (328)
T ss_pred             cccCCcCccChhhhcCC--CCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCc-cCCCCCCHHHHHHHHHHc
Confidence            45799999999999764  689999999999999999999999988776655555544333 566778999999999999


Q ss_pred             ccCCCCCC-----CHHHHhhCcCCCCC
Q 032711           97 QVNPNDRP-----TAAQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rp-----s~~~~l~~~~~~~~  118 (135)
                      ..+|.+|+     ++.+++.|+||...
T Consensus       231 ~~dP~~R~~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         231 IKDPNKRLGGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             CCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            99999997     89999999999763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=1.7e-19  Score=126.89  Aligned_cols=101  Identities=22%  Similarity=0.434  Sum_probs=76.9

Q ss_pred             cccccccccchhhhhccCCC---------CCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHcCCC-CCCCCccc
Q 032711           17 WHVSRWNSLTDQVVNSKNGG---------YGLPADIWSVGCTVLEMLTRCRPYFGVE-WVQALFKIARGEL-PPIPDSVS   85 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~---------~~~~~dvws~G~~l~~l~~g~~p~~~~~-~~~~~~~i~~~~~-~~~~~~~~   85 (135)
                      +-+||..||+||.+......         .+.++||||+||++|+|..|++||.... ....+..|..... ...|..-+
T Consensus       520 sQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~  599 (677)
T KOG0596|consen  520 SQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPE  599 (677)
T ss_pred             cccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCC
Confidence            45899999999988754222         5788999999999999999999996654 2344444443321 12333222


Q ss_pred             -HHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           86 -RDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        86 -~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                       .++.+++..||..||++|+++.++|+|||+..
T Consensus       600 ~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  600 NDELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             chHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence             34899999999999999999999999999986

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=7.7e-19  Score=117.25  Aligned_cols=103  Identities=30%  Similarity=0.563  Sum_probs=84.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCc-ccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDS-VSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~li~~~   95 (135)
                      ...|+..|++||.+.+.  .++.++|+|++|++++++++|..||...+.......+.....+..+.. .+..+.+++.+|
T Consensus       157 ~~~~~~~y~~PE~~~~~--~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  234 (274)
T cd06609         157 TFVGTPFWMAPEVIKQS--GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLC  234 (274)
T ss_pred             cccCCccccChhhhccC--CCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHH
Confidence            45788899999999874  589999999999999999999999987765555555554444444444 788999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      |..+|++||++++++.|+|+......
T Consensus       235 l~~~p~~Rpt~~~il~~~~~~~~~~~  260 (274)
T cd06609         235 LNKDPKERPSAKELLKHKFIKKAKKT  260 (274)
T ss_pred             hhCChhhCcCHHHHhhChhhcCCCcc
Confidence            99999999999999999999875443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.79  E-value=2.9e-19  Score=120.14  Aligned_cols=101  Identities=23%  Similarity=0.389  Sum_probs=80.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH---HHHHHHHcCCCCCCCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV---QALFKIARGELPPIPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~li~   93 (135)
                      ..+|+..|+|||++.+.  .++.++||||+|+++|++++|+.||.+.+..   ..............+..++.++.+++.
T Consensus       160 ~~~g~~~y~aPE~~~~~--~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~  237 (285)
T cd05631         160 GRVGTVGYMAPEVINNE--KYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICR  237 (285)
T ss_pred             CCCCCCCccCHhhhcCC--CCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHH
Confidence            45789999999999864  6899999999999999999999999765432   222222222223455678899999999


Q ss_pred             HhcccCCCCCCC-----HHHHhhCcCCCCCC
Q 032711           94 KCLQVNPNDRPT-----AAQLMEHPFVKRPL  119 (135)
Q Consensus        94 ~~l~~~p~~Rps-----~~~~l~~~~~~~~~  119 (135)
                      +||..+|.+|++     ++++++||||....
T Consensus       238 ~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05631         238 MLLTKNPKERLGCRGNGAAGVKQHPIFKNIN  268 (285)
T ss_pred             HHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence            999999999997     89999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.79  E-value=7.6e-19  Score=118.29  Aligned_cols=98  Identities=23%  Similarity=0.314  Sum_probs=76.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-------------------   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-------------------   77 (135)
                      ...|++.|+|||++.+. ..++.++|+||+|++++++++|+.||.+.+..+.+..+.....                   
T Consensus       162 ~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd07871         162 NEVVTLWYRPPDVLLGS-TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSY  240 (288)
T ss_pred             CceecccccChHHhcCC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcc
Confidence            34678999999998764 3688999999999999999999999987765554433321100                   


Q ss_pred             --CC--------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           78 --PP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        78 --~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                        +.        .....+.++.+++.+||..||.+|++++++++||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         241 LFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             ccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence              00        012356788999999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.79  E-value=3.3e-19  Score=130.10  Aligned_cols=88  Identities=20%  Similarity=0.486  Sum_probs=83.0

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      -+.||+||.|...  +|+.++||||+|+++||+++ |+.|+.+....+.+..|..+...+.|..++.++.+||..||+.+
T Consensus       668 PIRWMppEsIly~--kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~  745 (774)
T KOG1026|consen  668 PIRWMPPESILYG--KFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNEN  745 (774)
T ss_pred             eeecCCHHHhhcC--cccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcC
Confidence            4689999999985  79999999999999999988 99999999999999999999999999999999999999999999


Q ss_pred             CCCCCCHHHHh
Q 032711          100 PNDRPTAAQLM  110 (135)
Q Consensus       100 p~~Rps~~~~l  110 (135)
                      |.+||++.+|-
T Consensus       746 P~~RPsF~eI~  756 (774)
T KOG1026|consen  746 PKRRPSFKEIH  756 (774)
T ss_pred             cccCCCHHHHH
Confidence            99999999874

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.79  E-value=6.1e-19  Score=120.62  Aligned_cols=99  Identities=22%  Similarity=0.378  Sum_probs=85.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++|+|++|+.||.+.+..+....+..... ..+..++.++.+++.+||
T Consensus       160 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~l  236 (324)
T cd05587         160 TFCGTPDYIAPEIIAYQ--PYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV-SYPKSLSKEAVSICKGLL  236 (324)
T ss_pred             eecCCccccChhhhcCC--CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHh
Confidence            45799999999999874  588999999999999999999999988877777766665443 456678899999999999


Q ss_pred             ccCCCCCCCH-----HHHhhCcCCCCC
Q 032711           97 QVNPNDRPTA-----AQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rps~-----~~~l~~~~~~~~  118 (135)
                      ..+|.+|++.     .+++.||||...
T Consensus       237 ~~~P~~R~~~~~~~~~~~~~hp~~~~~  263 (324)
T cd05587         237 TKHPAKRLGCGPTGERDIREHAFFRRI  263 (324)
T ss_pred             hcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            9999999976     789999999863

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.79  E-value=1e-18  Score=121.03  Aligned_cols=104  Identities=23%  Similarity=0.400  Sum_probs=78.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC---------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG---------------------   75 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~---------------------   75 (135)
                      ...||..|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+..+....+...                     
T Consensus       181 ~~~~t~~y~aPE~~~~~--~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (359)
T cd07876         181 PYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVE  258 (359)
T ss_pred             CCcccCCCCCchhccCC--CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHh
Confidence            35789999999999774  6889999999999999999999999876543322211110                     


Q ss_pred             ---CCCC-----------------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           76 ---ELPP-----------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        76 ---~~~~-----------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                         ....                 .....+..+.+++.+||..||++||++.+++.|||+..+....
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~~  325 (359)
T cd07876         259 NRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPA  325 (359)
T ss_pred             hCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcCcc
Confidence               0000                 0112356789999999999999999999999999998755544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.79  E-value=4.9e-19  Score=121.08  Aligned_cols=99  Identities=23%  Similarity=0.432  Sum_probs=84.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++|++++|+.||...+.......+..... ..+..+++++.+++.+||
T Consensus       154 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~li~~~L  230 (323)
T cd05595         154 TFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKSLLAGLL  230 (323)
T ss_pred             cccCCcCcCCcccccCC--CCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCCCCCCHHHHHHHHHHc
Confidence            45799999999999764  689999999999999999999999988776666555544433 456678899999999999


Q ss_pred             ccCCCCCC-----CHHHHhhCcCCCCC
Q 032711           97 QVNPNDRP-----TAAQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rp-----s~~~~l~~~~~~~~  118 (135)
                      ..+|.+|+     ++.+++.|+||...
T Consensus       231 ~~dP~~R~~~~~~~~~~~l~h~~~~~~  257 (323)
T cd05595         231 KKDPKQRLGGGPSDAKEVMEHRFFLSI  257 (323)
T ss_pred             cCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence            99999998     89999999999863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.79  E-value=6.7e-19  Score=130.33  Aligned_cols=102  Identities=22%  Similarity=0.310  Sum_probs=85.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--CCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--PPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~li~~   94 (135)
                      .++||+.|+|||++.+.  .++.++|||++||++||+++|..||.+......+..+.....  +.....++..+.+++.+
T Consensus       539 ~~vGT~~Y~APE~l~~~--~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~  616 (669)
T cd05610         539 RILGTPDYLAPELLLGK--PHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEI  616 (669)
T ss_pred             ceeeCccccCHHHcCCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHH
Confidence            46899999999999875  689999999999999999999999988877777666654433  22233567888999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      ||..+|.+||++.+++.|+||.....
T Consensus       617 lL~~dP~~R~ta~e~l~h~~~~~~~~  642 (669)
T cd05610         617 LLTMDPTKRAGLKELKQHPLFHGVDW  642 (669)
T ss_pred             HcccChhHCcCHHHHHhCHhhcCCCH
Confidence            99999999999999999999987533

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PHA02988 hypothetical protein; Provisional

Probab=99.79  E-value=1.1e-18  Score=117.43  Aligned_cols=95  Identities=16%  Similarity=0.234  Sum_probs=78.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC-CCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG-ELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~~   95 (135)
                      ..+|+..|+|||++.+....++.++||||+|+++|++++|+.||.+.+..+....+... .....+...+..+.+++.+|
T Consensus       179 ~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~c  258 (283)
T PHA02988        179 KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEAC  258 (283)
T ss_pred             cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHH
Confidence            35788999999999763236899999999999999999999999988766666555433 23345556789999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032711           96 LQVNPNDRPTAAQLME  111 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~  111 (135)
                      |+.||.+||++.+++.
T Consensus       259 l~~dp~~Rps~~ell~  274 (283)
T PHA02988        259 TSHDSIKRPNIKEILY  274 (283)
T ss_pred             hcCCcccCcCHHHHHH
Confidence            9999999999999874

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.79  E-value=1.2e-18  Score=119.51  Aligned_cols=103  Identities=23%  Similarity=0.392  Sum_probs=78.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHH------------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------   72 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i------------------------   72 (135)
                      ...|+..|+|||++.+.  .++.++|+||+|+++|++++|+.||...+..+....+                        
T Consensus       161 ~~~g~~~y~aPE~~~~~--~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (331)
T cd06649         161 SFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGR  238 (331)
T ss_pred             cCCCCcCcCCHhHhcCC--CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccc
Confidence            45789999999999864  6899999999999999999999999765432221111                        


Q ss_pred             ----------------------HcCCCCCC-CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           73 ----------------------ARGELPPI-PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        73 ----------------------~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                                            .....+.. ...++.++.+|+.+||..||++||++.+++.|+||+.....
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~~  310 (331)
T cd06649         239 PVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEVE  310 (331)
T ss_pred             cccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcccc
Confidence                                  11111111 12467889999999999999999999999999999875543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.79  E-value=5.6e-19  Score=120.73  Aligned_cols=99  Identities=20%  Similarity=0.355  Sum_probs=85.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++...  .++.++|+||+|+++|+|++|+.||.+.+.......+..... ..+...+.++.+++.+|+
T Consensus       160 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~l  236 (323)
T cd05616         160 TFCGTPDYIAPEIIAYQ--PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV-AYPKSMSKEAVAICKGLM  236 (323)
T ss_pred             cCCCChhhcCHHHhcCC--CCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCCCcCCHHHHHHHHHHc
Confidence            46799999999999874  689999999999999999999999998887777666665543 456678899999999999


Q ss_pred             ccCCCCCCCH-----HHHhhCcCCCCC
Q 032711           97 QVNPNDRPTA-----AQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rps~-----~~~l~~~~~~~~  118 (135)
                      ..+|.+|++.     .+++.|+||+..
T Consensus       237 ~~~p~~R~~~~~~~~~~i~~h~~~~~~  263 (323)
T cd05616         237 TKHPGKRLGCGPEGERDIKEHAFFRYI  263 (323)
T ss_pred             ccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence            9999999974     789999999853

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.79  E-value=7.2e-19  Score=119.95  Aligned_cols=99  Identities=22%  Similarity=0.426  Sum_probs=84.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++++|++|..||.+.+.......+... .+..+..++.++.+++.+||
T Consensus       155 ~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~ll~~~l  231 (316)
T cd05592         155 TFCGTPDYIAPEILKGQ--KYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND-RPHFPRWISKEAKDCLSKLF  231 (316)
T ss_pred             cccCCccccCHHHHcCC--CCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHc
Confidence            45799999999999764  6889999999999999999999999888776666665543 33566778899999999999


Q ss_pred             ccCCCCCCCH-HHHhhCcCCCCC
Q 032711           97 QVNPNDRPTA-AQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rps~-~~~l~~~~~~~~  118 (135)
                      ..+|.+|+++ .+++.|+||...
T Consensus       232 ~~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05592         232 ERDPTKRLGVDGDIRQHPFFRGI  254 (316)
T ss_pred             cCCHHHcCCChHHHHcCcccCCC
Confidence            9999999986 478899999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.79  E-value=1e-18  Score=118.73  Aligned_cols=110  Identities=22%  Similarity=0.330  Sum_probs=84.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC---------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE---------------------   76 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~---------------------   76 (135)
                      ..++..|+|||++.+. ..++.++|+||+|+++++|++|+.||.+.+..+....+....                     
T Consensus       164 ~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (309)
T cd07872         164 EVVTLWYRPPDVLLGS-SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYN  242 (309)
T ss_pred             ccccccccCCHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhh
Confidence            4678899999998764 357899999999999999999999998766544333221100                     


Q ss_pred             CCC--------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCCCCc
Q 032711           77 LPP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP  128 (135)
Q Consensus        77 ~~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~~~~  128 (135)
                      .+.        ....++.++.+++.+||..||.+|+++.+++.|+||+........+|.+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~  302 (309)
T cd07872         243 FPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGTRIHSLPES  302 (309)
T ss_pred             cCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcccccccCCcc
Confidence            000        0123577889999999999999999999999999999877666666664

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.78  E-value=9.8e-19  Score=120.89  Aligned_cols=102  Identities=25%  Similarity=0.381  Sum_probs=77.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-------------------   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-------------------   77 (135)
                      ...||..|+|||++.+.  .++.++|+||+|+++++|++|+.||.+.+..+....+.....                   
T Consensus       177 ~~~~t~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (355)
T cd07874         177 PYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE  254 (355)
T ss_pred             CccccCCccCHHHHcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHh
Confidence            35789999999999764  689999999999999999999999987664433222111000                   


Q ss_pred             --C--------------------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           78 --P--------------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        78 --~--------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                        +                    ..+......+.+++.+||..||.+||++.++++||||.....
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~  319 (355)
T cd07874         255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYD  319 (355)
T ss_pred             cCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcccC
Confidence              0                    001113456789999999999999999999999999986544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.78  E-value=1.7e-18  Score=115.11  Aligned_cols=96  Identities=41%  Similarity=0.703  Sum_probs=82.2

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      ..|+..|+|||.+...  .++.++|+|++|++++++++|..||.+.+....+..+.....+..+...+..+.+++.+||+
T Consensus       172 ~~~~~~y~~pe~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  249 (267)
T cd06628         172 LQGSVFWMAPEVVKQT--SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSEAIDFLEKTFE  249 (267)
T ss_pred             cCCCcCccChhHhccC--CCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCcccCHHHHHHHHHHcc
Confidence            4678899999999764  57889999999999999999999998876665555555554455667788999999999999


Q ss_pred             cCCCCCCCHHHHhhCcCC
Q 032711           98 VNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        98 ~~p~~Rps~~~~l~~~~~  115 (135)
                      .+|.+||++.+++.|+||
T Consensus       250 ~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         250 IDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             CCchhCcCHHHHhhCCCC
Confidence            999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.78  E-value=1.4e-18  Score=114.89  Aligned_cols=96  Identities=27%  Similarity=0.565  Sum_probs=84.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      ..|+..|+|||+..+.  .++.++|+|++|++++++++|+.||...+..+....+..+.....+..++..+.+++.+|++
T Consensus       161 ~~~~~~~~~pe~~~~~--~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (256)
T cd08218         161 CIGTPYYLSPEICENR--PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFK  238 (256)
T ss_pred             ccCCccccCHHHhCCC--CCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhh
Confidence            4688899999998764  57889999999999999999999998877777777777666666677888999999999999


Q ss_pred             cCCCCCCCHHHHhhCcCC
Q 032711           98 VNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        98 ~~p~~Rps~~~~l~~~~~  115 (135)
                      .+|.+||++.+++.|+||
T Consensus       239 ~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         239 RNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             CChhhCcCHHHHhhCcCC
Confidence            999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.78  E-value=1.3e-18  Score=114.83  Aligned_cols=96  Identities=29%  Similarity=0.572  Sum_probs=82.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      ..|+..|+|||.+...  .++.++|+||+|++++++++|..||...+.......+........+...+.++.+++.+||.
T Consensus       161 ~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  238 (256)
T cd08220         161 VVGTPCYISPELCEGK--PYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLN  238 (256)
T ss_pred             cccCCcccCchhccCC--CCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcc
Confidence            4678899999999764  57889999999999999999999998877666666665555555667788999999999999


Q ss_pred             cCCCCCCCHHHHhhCcCC
Q 032711           98 VNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        98 ~~p~~Rps~~~~l~~~~~  115 (135)
                      .+|.+||++.+++.|||+
T Consensus       239 ~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         239 LDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             CChhhCCCHHHHhhCCCC
Confidence            999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.78  E-value=7.3e-19  Score=120.51  Aligned_cols=99  Identities=23%  Similarity=0.426  Sum_probs=79.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------cHHHHHHHHHcCCCCCCCCcccHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV--------EWVQALFKIARGELPPIPDSVSRDA   88 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~--------~~~~~~~~i~~~~~~~~~~~~~~~~   88 (135)
                      ..+||..|+|||++.+.  .++.++|+||+|+++|++++|+.||...        ...+.............|..++..+
T Consensus       155 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  232 (329)
T cd05588         155 TFCGTPNYIAPEILRGE--DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA  232 (329)
T ss_pred             cccCCccccCHHHHcCC--CCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHH
Confidence            46799999999999874  6889999999999999999999999531        1122222323333345677788999


Q ss_pred             HHHHHHhcccCCCCCCC------HHHHhhCcCCCC
Q 032711           89 RDFILKCLQVNPNDRPT------AAQLMEHPFVKR  117 (135)
Q Consensus        89 ~~li~~~l~~~p~~Rps------~~~~l~~~~~~~  117 (135)
                      .+++.+||..+|.+|++      +++++.||||..
T Consensus       233 ~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         233 SSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             HHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            99999999999999987      789999999975

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.78  E-value=1.1e-18  Score=117.12  Aligned_cols=96  Identities=27%  Similarity=0.442  Sum_probs=75.6

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC------------------CC-
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE------------------LP-   78 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~------------------~~-   78 (135)
                      ..|+..|+|||++.+.  .++.++|+||+|+++++|++|.++|.+......+..+....                  .. 
T Consensus       167 ~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (288)
T cd07863         167 VVVTLWYRAPEVLLQS--TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSP  244 (288)
T ss_pred             ccccccccCchHhhCC--CCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCC
Confidence            4678899999999764  68999999999999999999999997766554444332210                  00 


Q ss_pred             -------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           79 -------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        79 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                             .....++..+.+++.+||..||.+||++.+++.||||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         245 RGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             CCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                   0112456778999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.78  E-value=4.1e-18  Score=117.33  Aligned_cols=113  Identities=25%  Similarity=0.325  Sum_probs=81.1

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC---------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE---------------------   76 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~---------------------   76 (135)
                      ..|+..|+|||++... ..++.++|+||+|++++++++|..||.+.+.......+....                     
T Consensus       178 ~~~~~~y~aPE~~~~~-~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (342)
T cd07854         178 GLVTKWYRSPRLLLSP-NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRN  256 (342)
T ss_pred             ccccccccCHHHHhCc-cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhh
Confidence            3578889999987653 357889999999999999999999997766544333222110                     


Q ss_pred             ---CCC-----CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCCCCcccc
Q 032711           77 ---LPP-----IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHF  131 (135)
Q Consensus        77 ---~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~~~~~~~  131 (135)
                         ...     .....+.++.+++.+||..+|.+||++++++.|+||.....+...-.++.+|
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~~~~~~~~~~~~  319 (342)
T cd07854         257 DGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCPFDEPVSLHPF  319 (342)
T ss_pred             cccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccCCccccCCCCCc
Confidence               000     0124567889999999999999999999999999998654333333333444

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.78  E-value=1.4e-18  Score=131.21  Aligned_cols=104  Identities=17%  Similarity=0.282  Sum_probs=82.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++......++.++||||+||++|+|++|..||...+....+...............+.++.+||..||
T Consensus       200 s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L  279 (1021)
T PTZ00266        200 SCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLL  279 (1021)
T ss_pred             ccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHh
Confidence            35799999999999764345789999999999999999999999766554444333332222222456789999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      ..+|.+||++.+++.|+|+....+
T Consensus       280 ~~dPeeRPSa~QlL~h~~ik~i~~  303 (1021)
T PTZ00266        280 NLSAKERPSALQCLGYQIIKNVGP  303 (1021)
T ss_pred             cCChhHCcCHHHHhccHHHhhcCC
Confidence            999999999999999999986544

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.78  E-value=1.2e-18  Score=118.57  Aligned_cols=98  Identities=21%  Similarity=0.266  Sum_probs=70.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH---------HHHHHHHHcCC-----------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---------VQALFKIARGE-----------   76 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~---------~~~~~~i~~~~-----------   76 (135)
                      ..+||+.|+|||++.+. ..++.++|+||+|++++++++|++||.....         ...+..+....           
T Consensus       174 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (317)
T cd07868         174 PVVVTFWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDI  252 (317)
T ss_pred             CccccccccCCHHHcCC-CCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHH
Confidence            45789999999999764 3578999999999999999999999854221         11111111000           


Q ss_pred             -----------------CC---------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           77 -----------------LP---------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        77 -----------------~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                                       ..         .........+.+++.+||..||.+|++++++++||||
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         253 KKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             hhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                             00         0001123567899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=7.3e-19  Score=123.12  Aligned_cols=106  Identities=21%  Similarity=0.310  Sum_probs=93.3

Q ss_pred             hhhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-CCCCCcccHHHHHH
Q 032711           13 LRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIPDSVSRDARDF   91 (135)
Q Consensus        13 ~~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~l   91 (135)
                      ..+-++|||+.|.|||++++.  +++..+|.|++|+++||+++|.+||.+.+....+..|.++.- ...|..+++.+.++
T Consensus       574 ~KTwTFcGTpEYVAPEIILnK--GHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~L  651 (732)
T KOG0614|consen  574 RKTWTFCGTPEYVAPEIILNK--GHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDL  651 (732)
T ss_pred             CceeeecCCcccccchhhhcc--CcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHH
Confidence            344579999999999999986  689999999999999999999999999999999988887754 35577889999999


Q ss_pred             HHHhcccCCCCCCC-----HHHHhhCcCCCCCCC
Q 032711           92 ILKCLQVNPNDRPT-----AAQLMEHPFVKRPLP  120 (135)
Q Consensus        92 i~~~l~~~p~~Rps-----~~~~l~~~~~~~~~~  120 (135)
                      +.+++..+|.+|..     +.++.+|.||.+-..
T Consensus       652 ik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdw  685 (732)
T KOG0614|consen  652 IKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDW  685 (732)
T ss_pred             HHHHHhcCcHhhhccccCChHHHHhhhhhhcCCh
Confidence            99999999999975     789999999997554

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.78  E-value=6.8e-20  Score=138.52  Aligned_cols=105  Identities=36%  Similarity=0.605  Sum_probs=93.5

Q ss_pred             cccccccccchhhhhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WVQALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~-~~~~~~~dvws~G~~l~~l~~g~~p~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ..+||+.|||||++.+.. .+...+.||||+|||..||++|+.||...+ .-.++.++..+..++.|..++.+.++|+.+
T Consensus      1397 ~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~ 1476 (1509)
T KOG4645|consen 1397 SMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEH 1476 (1509)
T ss_pred             hhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHH
Confidence            568999999999999754 467888999999999999999999998755 457788899999999999999999999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      ||.-||++|.++.|++.|.|-+.....
T Consensus      1477 Cl~~dP~~Rw~~~qlle~~f~~~~~d~ 1503 (1509)
T KOG4645|consen 1477 CLEQDPKMRWTASQLLEHAFGKSCTDE 1503 (1509)
T ss_pred             HHhcCchhhhHHHHHHHhhcccccccc
Confidence            999999999999999999998875543

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.77  E-value=3.8e-18  Score=112.92  Aligned_cols=97  Identities=27%  Similarity=0.501  Sum_probs=83.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...|+..|++||++...  .++.++|+|++|++++++++|..||...+.......+........+...+..+.+++.+|+
T Consensus       169 ~~~~~~~~~~pE~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l  246 (265)
T cd08217         169 TYVGTPYYMSPEQLNHM--SYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSML  246 (265)
T ss_pred             ccccCCCccChhhhcCC--CCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHc
Confidence            34688999999999764  5788999999999999999999999887765555666666666667788899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCC
Q 032711           97 QVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~  115 (135)
                      ..+|.+||++.++++|||+
T Consensus       247 ~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         247 NVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             cCCcccCCCHHHHhhCCCC
Confidence            9999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.77  E-value=3.2e-18  Score=114.06  Aligned_cols=99  Identities=31%  Similarity=0.553  Sum_probs=77.8

Q ss_pred             cccccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC-CCCCcccHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-PIPDSVSRDARDFI   92 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~li   92 (135)
                      ...|+..|+|||++...   ...++.++|+||+|++++++++|+.||...........+...... ......+..+.+++
T Consensus       170 ~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  249 (272)
T cd06637         170 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFI  249 (272)
T ss_pred             cccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHH
Confidence            45788999999998632   135788999999999999999999999766554444433332221 22345678999999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcCC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      .+||..+|.+||++.+++.||||
T Consensus       250 ~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         250 ESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHHcCCChhhCCCHHHHhhCCCC
Confidence            99999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=2.6e-18  Score=113.90  Aligned_cols=96  Identities=42%  Similarity=0.708  Sum_probs=80.2

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC-CCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG-ELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|+..|+|||.+.+.  .++.++|+||+|++++++++|+.||...+.......+... .....+...+..+.+++.+||
T Consensus       167 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  244 (263)
T cd06625         167 VTGTPYWMSPEVISGE--GYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTF  244 (263)
T ss_pred             CCcCccccCcceeccC--CCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHh
Confidence            4678899999999875  5889999999999999999999999776655554444333 223456678899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCC
Q 032711           97 QVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~  115 (135)
                      ..+|.+||++.+++.|+||
T Consensus       245 ~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         245 VENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             hcCcccCCCHHHHhhCCCC
Confidence            9999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.77  E-value=3.5e-18  Score=115.65  Aligned_cols=108  Identities=24%  Similarity=0.324  Sum_probs=82.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC---------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE---------------------   76 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~---------------------   76 (135)
                      ..++..|+|||++.+. ..++.++|+||+|+++++|++|+.||.+.+..+....+....                     
T Consensus       164 ~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (301)
T cd07873         164 EVVTLWYRPPDILLGS-TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYN  242 (301)
T ss_pred             cceeecccCcHHHhCC-CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccc
Confidence            4568899999998764 357889999999999999999999998766544433221100                     


Q ss_pred             CCC--------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCCC
Q 032711           77 LPP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP  126 (135)
Q Consensus        77 ~~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~~  126 (135)
                      .+.        ....++..+.+++.+||..+|.+|+++.+++.|+||......-..+|
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~~~~~~  300 (301)
T cd07873         243 YPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGERIHKLP  300 (301)
T ss_pred             cCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccchhhcCC
Confidence            000        01245778899999999999999999999999999998776666655

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.77  E-value=3.4e-18  Score=114.99  Aligned_cols=103  Identities=34%  Similarity=0.536  Sum_probs=83.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC--CCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~li~~~   95 (135)
                      ..|+..|+|||.....  .++.++|+|++|++++++++|..||...+.......+........  +...+..+.+++.+|
T Consensus       175 ~~~~~~y~aPE~~~~~--~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  252 (285)
T cd06648         175 LVGTPYWMAPEVISRL--PYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRM  252 (285)
T ss_pred             ccCCccccCHHHhcCC--CCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHH
Confidence            4688999999998764  578999999999999999999999987766555555544432222  233678999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                      |..+|++||++++++.|+|+....+..
T Consensus       253 l~~~p~~Rpt~~~il~~~~~~~~~~~~  279 (285)
T cd06648         253 LVRDPAQRATAAELLNHPFLAKAGPPS  279 (285)
T ss_pred             cccChhhCcCHHHHccCcccccCCCcc
Confidence            999999999999999999999877643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.77  E-value=2.3e-19  Score=122.72  Aligned_cols=99  Identities=22%  Similarity=0.430  Sum_probs=84.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+.......+..... ..+...++++.+++.+||
T Consensus       155 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~li~~~L  231 (325)
T cd05594         155 TFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLSPEAKSLLSGLL  231 (325)
T ss_pred             cccCCcccCCHHHHccC--CCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCC-CCCCCCCHHHHHHHHHHh
Confidence            45799999999999764  689999999999999999999999988776655555544433 456778899999999999


Q ss_pred             ccCCCCCC-----CHHHHhhCcCCCCC
Q 032711           97 QVNPNDRP-----TAAQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rp-----s~~~~l~~~~~~~~  118 (135)
                      ..||.+|+     ++.+++.|+||...
T Consensus       232 ~~dP~~R~~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         232 KKDPKQRLGGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             hcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence            99999997     89999999999863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.77  E-value=1.9e-18  Score=120.58  Aligned_cols=101  Identities=28%  Similarity=0.350  Sum_probs=79.2

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC-CCCC--CCcccHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE-LPPI--PDSVSRDARDFI   92 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~-~~~~--~~~~~~~~~~li   92 (135)
                      .+.+||+.|+|||++.+.  .++.++||||+||++|+|++|..||...+.......+.... ....  ...++.++.+++
T Consensus       206 ~~~~gt~~Y~aPE~~~~~--~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli  283 (381)
T cd05626         206 HSLVGTPNYIAPEVLLRK--GYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLI  283 (381)
T ss_pred             ccccCCccccCHHHHcCC--CCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHH
Confidence            356899999999999764  68999999999999999999999998877655555554322 1122  335789999999


Q ss_pred             HHhc--ccCCCCCCCHHHHhhCcCCCCC
Q 032711           93 LKCL--QVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        93 ~~~l--~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      .+++  ..++..|+++.+++.|+||...
T Consensus       284 ~~ll~~~~~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         284 TKLCCSAEERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             HHHccCcccccCCCCHHHHhcCcccCCC
Confidence            8854  5555669999999999999863

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.77  E-value=1.1e-18  Score=121.80  Aligned_cols=88  Identities=25%  Similarity=0.458  Sum_probs=81.8

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      -..|.|||.+...  .++.++||||+|++|+|+++ |+.|+.+....+.+..+.++.-.+.|..++.++.++|..||..+
T Consensus       367 PIkWtAPEa~~~~--~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~  444 (468)
T KOG0197|consen  367 PIKWTAPEALNYG--KFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHED  444 (468)
T ss_pred             CceecCHHHHhhC--CcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCC
Confidence            3589999999875  79999999999999999988 89999999999999999999888999999999999999999999


Q ss_pred             CCCCCCHHHHh
Q 032711          100 PNDRPTAAQLM  110 (135)
Q Consensus       100 p~~Rps~~~~l  110 (135)
                      |++|||++.+.
T Consensus       445 P~~RPtF~~L~  455 (468)
T KOG0197|consen  445 PEDRPTFETLR  455 (468)
T ss_pred             cccCCCHHHHH
Confidence            99999998664

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.77  E-value=1.1e-18  Score=119.71  Aligned_cols=100  Identities=28%  Similarity=0.509  Sum_probs=79.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WVQALFKIARGELPPIPDSVSRDARDFI   92 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~li   92 (135)
                      ..+||..|+|||++.+. ..++.++||||+|+++++|++|..||....    .......+... ....+..++..+.+++
T Consensus       165 ~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li  242 (332)
T cd05614         165 SFCGTIEYMAPEIIRGK-GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKC-DPPFPSFIGPEAQDLL  242 (332)
T ss_pred             cccCCccccCHHHhcCC-CCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCHHHHHHH
Confidence            45799999999999764 247889999999999999999999996432    12222233332 2355667889999999


Q ss_pred             HHhcccCCCCCC-----CHHHHhhCcCCCCC
Q 032711           93 LKCLQVNPNDRP-----TAAQLMEHPFVKRP  118 (135)
Q Consensus        93 ~~~l~~~p~~Rp-----s~~~~l~~~~~~~~  118 (135)
                      .+||..||.+|+     ++++++.|+||...
T Consensus       243 ~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         243 HKLLRKDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             HHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            999999999999     78899999999863

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.77  E-value=4.8e-18  Score=112.25  Aligned_cols=96  Identities=32%  Similarity=0.636  Sum_probs=81.6

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      ..|++.|+|||+....  .++.++|+|++|++++++++|..||...+.......+............+..+.+++.+|+.
T Consensus       162 ~~~~~~~~ape~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  239 (257)
T cd08225         162 CVGTPYYLSPEICQNR--PYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFK  239 (257)
T ss_pred             cCCCccccCHHHHcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHhc
Confidence            3588899999998764  57899999999999999999999998776666665555555545556678899999999999


Q ss_pred             cCCCCCCCHHHHhhCcCC
Q 032711           98 VNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        98 ~~p~~Rps~~~~l~~~~~  115 (135)
                      .+|++||++.++++|+||
T Consensus       240 ~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         240 VSPRDRPSITSILKRPFL  257 (257)
T ss_pred             cChhhCcCHHHHhhCCCC
Confidence            999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.77  E-value=2.4e-18  Score=117.80  Aligned_cols=100  Identities=32%  Similarity=0.540  Sum_probs=74.8

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--------------------
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--------------------   78 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--------------------   78 (135)
                      .++..|+|||++......++.++|+||+|++++++++|+.||.................+                    
T Consensus       169 ~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (327)
T cd08227         169 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRS  248 (327)
T ss_pred             cceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCccc
Confidence            567789999999764335889999999999999999999999765433322221111100                    


Q ss_pred             -------------------------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           79 -------------------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        79 -------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                                               +....+++.+.+++.+||+.||.+||++.++++||||+..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~  313 (327)
T cd08227         249 GANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  313 (327)
T ss_pred             CCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence                                     0111245678899999999999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.77  E-value=1.6e-18  Score=113.59  Aligned_cols=104  Identities=30%  Similarity=0.525  Sum_probs=88.4

Q ss_pred             hcccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHcCCCCCCC--CcccHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WVQALFKIARGELPPIP--DSVSRDARDF   91 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~-~~~~~~~i~~~~~~~~~--~~~~~~~~~l   91 (135)
                      +...|-+.|||||.+... ...|+..+||||+|+.++|+.+|..||.+.+ ..+.+.++.....+.++  ..+++.+.+|
T Consensus       249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~f  328 (391)
T KOG0983|consen  249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSF  328 (391)
T ss_pred             ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHH
Confidence            346899999999999854 4679999999999999999999999998865 46788888776655444  3478999999


Q ss_pred             HHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           92 ILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      +..||..|+.+||.-.++++|+|+....
T Consensus       329 v~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye  356 (391)
T KOG0983|consen  329 VKDCLTKDHRKRPKYNKLLEHPFIKRYE  356 (391)
T ss_pred             HHHHhhcCcccCcchHHHhcCcceeecc
Confidence            9999999999999999999999987543

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=3.4e-19  Score=122.12  Aligned_cols=101  Identities=29%  Similarity=0.437  Sum_probs=83.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||..|+|||++.+. ..++.++|+||+|+++|+|++|+.||...+.......+..+........++..+.+++.+||
T Consensus       155 ~~~gt~~y~aPE~~~~~-~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L  233 (330)
T cd05586         155 TFCGTTEYLAPEVLLDE-KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLL  233 (330)
T ss_pred             CccCCccccCHHHHcCC-CCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHc
Confidence            46799999999999764 35789999999999999999999999887776666666555443333457889999999999


Q ss_pred             ccCCCCCC----CHHHHhhCcCCCCC
Q 032711           97 QVNPNDRP----TAAQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rp----s~~~~l~~~~~~~~  118 (135)
                      ..+|.+|+    ++.+++.|+||...
T Consensus       234 ~~~P~~R~~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         234 NRNPQHRLGAHRDAVELKEHPFFADI  259 (330)
T ss_pred             CCCHHHCCCCCCCHHHHhcCccccCC
Confidence            99999998    68999999999753

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.77  E-value=3.1e-18  Score=113.61  Aligned_cols=98  Identities=32%  Similarity=0.535  Sum_probs=79.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCC-----CcccHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIP-----DSVSRDARDF   91 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~l   91 (135)
                      ..+|+..|++||++... ..++.++|+|++|++++++++|+.||.+.+.......+.........     ..++..+.++
T Consensus       165 ~~~~~~~y~~Pe~~~~~-~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  243 (267)
T cd06610         165 TFVGTPCWMAPEVMEQV-HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKM  243 (267)
T ss_pred             cccCChhhcChHHHccc-cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHH
Confidence            34688999999998764 35789999999999999999999999877665555544443332222     2457889999


Q ss_pred             HHHhcccCCCCCCCHHHHhhCcCC
Q 032711           92 ILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      +.+|+..+|.+||++.+++.||||
T Consensus       244 i~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         244 ISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HHHHcCCChhhCcCHHHHhhCCCC
Confidence            999999999999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.76  E-value=4.2e-18  Score=116.49  Aligned_cols=99  Identities=21%  Similarity=0.372  Sum_probs=84.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++...  .++.++|+||+|+++++|++|..||.+.+.......+..... ..+..++.++.+++.+||
T Consensus       160 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~li~~~l  236 (323)
T cd05615         160 TFCGTPDYIAPEIIAYQ--PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV-SYPKSLSKEAVSICKGLM  236 (323)
T ss_pred             CccCCccccCHHHHcCC--CCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCCccCCHHHHHHHHHHc
Confidence            45799999999999764  688999999999999999999999988877666666655443 456678899999999999


Q ss_pred             ccCCCCCCC-----HHHHhhCcCCCCC
Q 032711           97 QVNPNDRPT-----AAQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rps-----~~~~l~~~~~~~~  118 (135)
                      ..+|.+|++     .++++.|+||...
T Consensus       237 ~~~p~~R~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         237 TKHPSKRLGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             ccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence            999999997     4789999999964

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.76  E-value=5.6e-18  Score=112.54  Aligned_cols=97  Identities=38%  Similarity=0.677  Sum_probs=80.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC--CCCCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG--ELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~li~~   94 (135)
                      ...|+..|+|||++...  .++.++|+|++|++++++++|..||...+.......+...  ..+..+...+..+.+++.+
T Consensus       167 ~~~~~~~~~~pe~~~~~--~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  244 (265)
T cd06631         167 SMHGTPYWMAPEVINES--GYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTS  244 (265)
T ss_pred             ccCCCccccChhhhcCC--CCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHH
Confidence            34688899999999764  5789999999999999999999999876655444333322  2334566788999999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      ||..+|.+||++.+++.||||
T Consensus       245 ~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         245 CLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             HhcCCcccCCCHHHHhcCCCC
Confidence            999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.76  E-value=1.2e-18  Score=119.04  Aligned_cols=99  Identities=21%  Similarity=0.321  Sum_probs=83.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||...+..+....+..... ..+...+..+.+++.+||
T Consensus       155 ~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~l  231 (323)
T cd05575         155 TFCGTPEYLAPEVLRKQ--PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL-RLKPNISVSARHLLEGLL  231 (323)
T ss_pred             cccCChhhcChhhhcCC--CCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHh
Confidence            35799999999999764  688999999999999999999999988777666666655443 445567899999999999


Q ss_pred             ccCCCCCCCH----HHHhhCcCCCCC
Q 032711           97 QVNPNDRPTA----AQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rps~----~~~l~~~~~~~~  118 (135)
                      ..+|.+|+++    .+++.|+||...
T Consensus       232 ~~~p~~R~~~~~~~~~il~~~~~~~~  257 (323)
T cd05575         232 QKDRTKRLGAKDDFLEIKNHVFFSSI  257 (323)
T ss_pred             hcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence            9999999987    689999999763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.76  E-value=1.4e-18  Score=118.41  Aligned_cols=111  Identities=26%  Similarity=0.438  Sum_probs=92.9

Q ss_pred             hhhhhhhhhhh------hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-
Q 032711            5 TVEGLGNALRR------KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-   77 (135)
Q Consensus         5 ~~~~~~~~~~~------~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-   77 (135)
                      +++|||.+...      .+.||++.|||||++...  +|+.|+|+||+|+++|++++|+.||...+..+.+..+.++.. 
T Consensus       155 KIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~--~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~  232 (429)
T KOG0595|consen  155 KIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQ--QYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEI  232 (429)
T ss_pred             EecccchhhhCCchhHHHHhhCCccccCHHHHHhc--cccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccc
Confidence            45666655443      357999999999999864  799999999999999999999999999988888877776654 


Q ss_pred             -CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           78 -PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        78 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                       +..+...+....+++...+..++..|.++.+.+.|+++..
T Consensus       233 ~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~  273 (429)
T KOG0595|consen  233 VPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAA  273 (429)
T ss_pred             cCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhccc
Confidence             3445667777889999999999999999999999988875

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.76  E-value=1e-18  Score=124.33  Aligned_cols=94  Identities=24%  Similarity=0.351  Sum_probs=80.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH-HHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV-QALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      +.+=|..|.|||+....  .|+..||+||+|++||+|++|..||...... +...++..+..   ...++..+++|+..|
T Consensus       472 tp~~t~~y~APEvl~~~--~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~---s~~vS~~AKdLl~~L  546 (612)
T KOG0603|consen  472 TPALTLQYVAPEVLAIQ--EYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKF---SECVSDEAKDLLQQL  546 (612)
T ss_pred             ccchhhcccChhhhccC--CCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCcc---ccccCHHHHHHHHHh
Confidence            34668899999999864  7999999999999999999999999765544 55566655443   277899999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~  115 (135)
                      |+.+|.+|+++.++..|+|+
T Consensus       547 L~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  547 LQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             ccCChhhCcChhhhccCcch
Confidence            99999999999999999999

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.76  E-value=1.1e-18  Score=124.09  Aligned_cols=111  Identities=25%  Similarity=0.373  Sum_probs=90.6

Q ss_pred             hhhhhhhhhhh-----hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH-HHHHHHHcCCCC
Q 032711            5 TVEGLGNALRR-----KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV-QALFKIARGELP   78 (135)
Q Consensus         5 ~~~~~~~~~~~-----~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~-~~~~~i~~~~~~   78 (135)
                      +|+++|.+...     ++++|||-|||||++..   .|+..+|||++|++++||.++..||...... .++.++.++..+
T Consensus       186 KIGDLGLAtl~r~s~aksvIGTPEFMAPEmYEE---~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP  262 (632)
T KOG0584|consen  186 KIGDLGLATLLRKSHAKSVIGTPEFMAPEMYEE---NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKP  262 (632)
T ss_pred             eecchhHHHHhhccccceeccCccccChHHHhh---hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCH
Confidence            36777766654     34699999999999986   5999999999999999999999999887654 455667777653


Q ss_pred             CCC-CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           79 PIP-DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        79 ~~~-~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      ..- ..-.+++++||.+|+.. ...|+++.++|.|+||....
T Consensus       263 ~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d~  303 (632)
T KOG0584|consen  263 AALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDEDG  303 (632)
T ss_pred             HHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhcccc
Confidence            222 22368899999999999 88999999999999999863

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.76  E-value=4.3e-18  Score=117.19  Aligned_cols=103  Identities=22%  Similarity=0.327  Sum_probs=77.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-------------------   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-------------------   77 (135)
                      ..+||..|+|||++.+. ..++.++|+||+|+++++|++|..||.+.+..+.+..+.....                   
T Consensus       174 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (343)
T cd07878         174 GYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYI  252 (343)
T ss_pred             CccccccccCchHhcCC-ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHh
Confidence            35789999999999763 3578999999999999999999999977655443333221100                   


Q ss_pred             ---CCC--------CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           78 ---PPI--------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        78 ---~~~--------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                         ...        ....++.+.+++.+||..||.+||++.+++.||||.....
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~  306 (343)
T cd07878         253 QSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD  306 (343)
T ss_pred             hccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCC
Confidence               000        1124566789999999999999999999999999987543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.76  E-value=1.9e-18  Score=118.51  Aligned_cols=100  Identities=24%  Similarity=0.426  Sum_probs=78.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------cHHHHHHHHHcCCCCCCCCcccHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV--------EWVQALFKIARGELPPIPDSVSRDA   88 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~--------~~~~~~~~i~~~~~~~~~~~~~~~~   88 (135)
                      ..+||..|+|||++.+.  .++.++|+||+|+++|+|++|+.||...        .................|...+..+
T Consensus       155 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~  232 (329)
T cd05618         155 TFCGTPNYIAPEILRGE--DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA  232 (329)
T ss_pred             cccCCccccCHHHHcCC--CCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHH
Confidence            46799999999999874  6889999999999999999999998521        1122222222233335677788999


Q ss_pred             HHHHHHhcccCCCCCCC------HHHHhhCcCCCCC
Q 032711           89 RDFILKCLQVNPNDRPT------AAQLMEHPFVKRP  118 (135)
Q Consensus        89 ~~li~~~l~~~p~~Rps------~~~~l~~~~~~~~  118 (135)
                      .+++.+||..+|.+|++      +.+++.||||...
T Consensus       233 ~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         233 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             HHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            99999999999999998      5799999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.76  E-value=6.2e-18  Score=114.36  Aligned_cols=101  Identities=34%  Similarity=0.579  Sum_probs=83.0

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--CCCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--PPIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~li~~~   95 (135)
                      ..|+..|+|||.+...  .++.++|+|++|+++|++++|+.||...+.......+.....  ...+..++..+.+++.+|
T Consensus       175 ~~~~~~y~aPE~~~~~--~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  252 (296)
T cd06655         175 MVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRC  252 (296)
T ss_pred             cCCCccccCcchhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHH
Confidence            4688899999998764  578899999999999999999999988776555444433222  234556788999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      |..+|.+||++.+++.|+||+...+
T Consensus       253 l~~dp~~Rpt~~~il~~~~~~~~~~  277 (296)
T cd06655         253 LEMDVEKRGSAKELLQHPFLKLAKP  277 (296)
T ss_pred             hhcChhhCCCHHHHhhChHhhhccc
Confidence            9999999999999999999997664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.76  E-value=2.7e-18  Score=117.65  Aligned_cols=100  Identities=20%  Similarity=0.369  Sum_probs=80.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC------cHHHHHHHHHcCCCCCCCCcccHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV------EWVQALFKIARGELPPIPDSVSRDARD   90 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~   90 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||...      +................+..++..+.+
T Consensus       155 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  232 (327)
T cd05617         155 TFCGTPNYIAPEILRGE--EYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASH  232 (327)
T ss_pred             cccCCcccCCHHHHCCC--CCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            46799999999999764  6899999999999999999999999531      222333333333334567778899999


Q ss_pred             HHHHhcccCCCCCCC------HHHHhhCcCCCCC
Q 032711           91 FILKCLQVNPNDRPT------AAQLMEHPFVKRP  118 (135)
Q Consensus        91 li~~~l~~~p~~Rps------~~~~l~~~~~~~~  118 (135)
                      ++.+||..||.+|++      +++++.|+||...
T Consensus       233 li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         233 VLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             HHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence            999999999999997      5799999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.76  E-value=4.4e-18  Score=114.03  Aligned_cols=99  Identities=31%  Similarity=0.513  Sum_probs=77.7

Q ss_pred             cccccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC-CCCCcccHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-PIPDSVSRDARDFI   92 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~li   92 (135)
                      ...|+..|+|||++...   ...++.++|+|++|++++++++|..||...........+...... .....++..+.+++
T Consensus       180 ~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  259 (282)
T cd06636         180 TFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFI  259 (282)
T ss_pred             cccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHH
Confidence            35688999999998632   135788899999999999999999999776655444443333221 22345778999999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcCC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      .+||..+|.+||++.+++.|+||
T Consensus       260 ~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         260 EGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             HHHhCCChhhCcCHHHHhcCCCC
Confidence            99999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.76  E-value=6.1e-18  Score=114.37  Aligned_cols=103  Identities=34%  Similarity=0.579  Sum_probs=82.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li~~~   95 (135)
                      ..|++.|+|||.+...  .++.++|+|++|++++++++|+.||...+.......+......  ..+..++..+.+++.+|
T Consensus       176 ~~~~~~y~aPE~~~~~--~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  253 (296)
T cd06654         176 MVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC  253 (296)
T ss_pred             ccCCccccCHHHHcCC--CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHH
Confidence            4788999999998764  5788999999999999999999999877654444333322221  23456778899999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                      |..+|.+||++.+++.|+|+....+..
T Consensus       254 l~~~p~~Rpt~~eil~~~~~~~~~~~~  280 (296)
T cd06654         254 LDMDVEKRGSAKELLQHQFLKIAKPLS  280 (296)
T ss_pred             CcCCcccCcCHHHHhhChhhhccCCcc
Confidence            999999999999999999998876644

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.76  E-value=7.3e-18  Score=113.80  Aligned_cols=104  Identities=34%  Similarity=0.485  Sum_probs=83.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC--CCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP--IPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~li~~~   95 (135)
                      ..|+..|+|||.+...  .++.++|+||+|++++++++|..||...+.......+.......  .....+..+.+++.+|
T Consensus       178 ~~~~~~y~aPE~~~~~--~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  255 (292)
T cd06658         178 LVGTPYWMAPEVISRL--PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLM  255 (292)
T ss_pred             eecCccccCHHHHccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHH
Confidence            4688999999998764  57889999999999999999999998776655544443322211  2234677899999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPLPTSW  123 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~~~~~  123 (135)
                      +..+|.+||+++++++|+||....+++.
T Consensus       256 l~~~P~~Rpt~~~il~~~~~~~~~~~~~  283 (292)
T cd06658         256 LVREPSQRATAQELLQHPFLKLAGPPSC  283 (292)
T ss_pred             ccCChhHCcCHHHHhhChhhhccCCccc
Confidence            9999999999999999999998766654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.76  E-value=5.6e-18  Score=117.86  Aligned_cols=100  Identities=25%  Similarity=0.435  Sum_probs=78.0

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc-----------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR-----------------------   74 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~-----------------------   74 (135)
                      .+++..|+|||++.+. ..++.++|+||+|+++++|++|+.||.+.+....+..+..                       
T Consensus       164 ~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~  242 (372)
T cd07853         164 EVVTQYYRAPEILMGS-RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILR  242 (372)
T ss_pred             CCcCCCcCCHHHHcCC-CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHh
Confidence            4678899999999874 3578999999999999999999999987665444333221                       


Q ss_pred             CCC-C-------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           75 GEL-P-------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        75 ~~~-~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      ... .       ......+.++.+++.+||..||.+||++.+++.||||...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         243 GPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             CCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence            000 0       1123356789999999999999999999999999999873

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=2.6e-18  Score=118.16  Aligned_cols=104  Identities=23%  Similarity=0.361  Sum_probs=91.6

Q ss_pred             hhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 032711           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL   93 (135)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~   93 (135)
                      .++++|||+-|+|||.+...  .|+..+|.|++|++||||+.|++||.+.+..+.+..|..... .+|..+++++.++..
T Consensus       506 TTkTFCGTPdYiAPEIi~Yq--PYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv-syPKslSkEAv~ick  582 (683)
T KOG0696|consen  506 TTKTFCGTPDYIAPEIIAYQ--PYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV-SYPKSLSKEAVAICK  582 (683)
T ss_pred             ceeeecCCCcccccceEEec--ccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC-cCcccccHHHHHHHH
Confidence            34578999999999999986  799999999999999999999999999998888888776654 788899999999999


Q ss_pred             HhcccCCCCCCCH-----HHHhhCcCCCCCCC
Q 032711           94 KCLQVNPNDRPTA-----AQLMEHPFVKRPLP  120 (135)
Q Consensus        94 ~~l~~~p~~Rps~-----~~~l~~~~~~~~~~  120 (135)
                      .++..+|.+|..+     .++..|+||+....
T Consensus       583 g~ltK~P~kRLGcg~~ge~di~~H~FFR~iDW  614 (683)
T KOG0696|consen  583 GLLTKHPGKRLGCGPEGERDIREHPFFRRIDW  614 (683)
T ss_pred             HHhhcCCccccCCCCccccchhhCcchhhccH
Confidence            9999999999754     47889999986443

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.76  E-value=7.7e-18  Score=111.78  Aligned_cols=99  Identities=30%  Similarity=0.580  Sum_probs=79.3

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHHHcCCCCCCCCc-ccHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WVQALFKIARGELPPIPDS-VSRDARDF   91 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~-----~~~~~~~i~~~~~~~~~~~-~~~~~~~l   91 (135)
                      ..|+..|++||.+.+.  .++.++|+|++|++++++++|..||...+     ..+....+.....+..+.. .+.++.++
T Consensus       159 ~~~~~~y~~PE~~~~~--~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  236 (265)
T cd06605         159 FVGTSSYMAPERIQGN--DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDF  236 (265)
T ss_pred             ccCChhccCHHHHcCC--CCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHH
Confidence            6788899999999774  68899999999999999999999986542     2233334444433334443 78889999


Q ss_pred             HHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           92 ILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      +.+||..+|.+||++.+++.||||...
T Consensus       237 i~~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         237 VNLCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             HHHHcCCCchhCcCHHHHhhCchhhcc
Confidence            999999999999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.76  E-value=4.7e-18  Score=114.04  Aligned_cols=101  Identities=18%  Similarity=0.260  Sum_probs=79.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH----HHHHHHHcCCCCCCCCcccHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV----QALFKIARGELPPIPDSVSRDARDFI   92 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~li   92 (135)
                      ...||+.|+|||++.+.  .++.++|+||+|+++|++++|+.||......    .....+... ....+..++..+.+++
T Consensus       156 ~~~g~~~y~aPE~~~~~--~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li  232 (280)
T cd05608         156 GYAGTPGFMAPELLQGE--EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND-SVTYPDKFSPASKSFC  232 (280)
T ss_pred             ccCCCcCccCHHHhcCC--CCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc-CCCCcccCCHHHHHHH
Confidence            35789999999999874  6889999999999999999999999764321    122222222 2244566889999999


Q ss_pred             HHhcccCCCCCC-----CHHHHhhCcCCCCCCC
Q 032711           93 LKCLQVNPNDRP-----TAAQLMEHPFVKRPLP  120 (135)
Q Consensus        93 ~~~l~~~p~~Rp-----s~~~~l~~~~~~~~~~  120 (135)
                      .+||..+|.+|+     ++++++.||||+....
T Consensus       233 ~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~  265 (280)
T cd05608         233 EALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNW  265 (280)
T ss_pred             HHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCH
Confidence            999999999999     7899999999987443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.76  E-value=5.7e-18  Score=111.83  Aligned_cols=96  Identities=35%  Similarity=0.641  Sum_probs=76.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li~~~   95 (135)
                      ..|+..|++||++.+.  .++.++|+|++|++++++++|+.||...........+......  ..+...+..+.+++.+|
T Consensus       159 ~~~~~~y~~PE~~~~~--~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  236 (256)
T cd06612         159 VIGTPFWMAPEVIQEI--GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKC  236 (256)
T ss_pred             ccCCccccCHHHHhcC--CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHH
Confidence            4578899999998764  6889999999999999999999999876654444333222221  22345677899999999


Q ss_pred             cccCCCCCCCHHHHhhCcCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~  115 (135)
                      +..+|.+||++.+++.|+||
T Consensus       237 l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         237 LVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             HhcChhhCcCHHHHhcCCCC
Confidence            99999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.76  E-value=3.9e-18  Score=118.39  Aligned_cols=106  Identities=25%  Similarity=0.383  Sum_probs=89.8

Q ss_pred             cccccccccchhhhhccCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC-CCCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNG--GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-PIPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~--~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||.+.....  .-+.+.|||++|+.||.++.|+.||.+....+.+.+|...... +........++++|.
T Consensus       274 ~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~  353 (576)
T KOG0585|consen  274 RTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIK  353 (576)
T ss_pred             hcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHH
Confidence            3699999999999987421  2367899999999999999999999999999999998877652 222346889999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                      ++|..||.+|+++.++..|||........
T Consensus       354 ~lL~KdP~~Ri~l~~ik~Hpwvt~~g~~~  382 (576)
T KOG0585|consen  354 RLLEKDPEQRITLPDIKLHPWVTRDGDSP  382 (576)
T ss_pred             HHhhcChhheeehhhheecceeccCCCCC
Confidence            99999999999999999999999875544

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.76  E-value=6.5e-18  Score=113.74  Aligned_cols=99  Identities=32%  Similarity=0.574  Sum_probs=79.2

Q ss_pred             ccccccccchhhhhccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC--CCCcccHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKN---GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP--IPDSVSRDARDFI   92 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~---~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~li   92 (135)
                      ..|+..|+|||++....   ..++.++|+||+|++++++++|+.||...+....+..+.......  .+......+.+++
T Consensus       188 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  267 (291)
T cd06639         188 SVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFI  267 (291)
T ss_pred             ccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHH
Confidence            46788999999986431   135789999999999999999999998877666665554443322  2345667899999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcCCC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~~~  116 (135)
                      .+|++.+|.+||++.++++||||+
T Consensus       268 ~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         268 SQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HHHhhcChhhCcCHHHHhcCcccC
Confidence            999999999999999999999984

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.75  E-value=5.4e-18  Score=113.45  Aligned_cols=100  Identities=29%  Similarity=0.519  Sum_probs=82.5

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      ..|+..|+|||.+...  .++.++|+|++|++++++++|..||...........+.....+..+...+..+.+++.+||.
T Consensus       161 ~~~~~~y~apE~~~~~--~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (277)
T cd06640         161 FVGTPFWMAPEVIQQS--AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLN  238 (277)
T ss_pred             ccCcccccCHhHhccC--CCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcc
Confidence            4678889999998764  57899999999999999999999998776655554444443444555678889999999999


Q ss_pred             cCCCCCCCHHHHhhCcCCCCCC
Q 032711           98 VNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        98 ~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      .+|.+||++.+++.|+|+....
T Consensus       239 ~~p~~Rp~~~~il~~~~~~~~~  260 (277)
T cd06640         239 KDPSFRPTAKELLKHKFIVKNA  260 (277)
T ss_pred             cCcccCcCHHHHHhChHhhhcc
Confidence            9999999999999999997644

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.75  E-value=1.7e-18  Score=119.72  Aligned_cols=104  Identities=21%  Similarity=0.317  Sum_probs=84.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH---HHHHHHHcCCCCCCCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV---QALFKIARGELPPIPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~li~   93 (135)
                      ..+||.+|||||++.+.  .|+...|.|++||++|+|+.|..||......   +.+.+........++..++++++++..
T Consensus       345 ~rvGT~GYMAPEvl~ne--~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc~  422 (591)
T KOG0986|consen  345 GRVGTVGYMAPEVLQNE--VYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLCE  422 (591)
T ss_pred             cccCcccccCHHHHcCC--cccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHHH
Confidence            34999999999999885  6999999999999999999999999765432   223333333334677889999999999


Q ss_pred             HhcccCCCCCCC-----HHHHhhCcCCCCCCCCC
Q 032711           94 KCLQVNPNDRPT-----AAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        94 ~~l~~~p~~Rps-----~~~~l~~~~~~~~~~~~  122 (135)
                      .+|..||.+|..     +.++.+||||+..+...
T Consensus       423 ~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~r  456 (591)
T KOG0986|consen  423 GLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRR  456 (591)
T ss_pred             HHHccCHHHhccCCCcCcchhhhCcccccCCHhH
Confidence            999999999975     56899999999865543

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=3.2e-18  Score=117.42  Aligned_cols=101  Identities=24%  Similarity=0.373  Sum_probs=82.1

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-CCCC------CcccHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIP------DSVSRDA   88 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-~~~~------~~~~~~~   88 (135)
                      ...+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+..+....+..... ...+      ..++.++
T Consensus       156 ~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~  233 (333)
T cd05600         156 NSVVGSPDYMAPEVLRGK--GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEA  233 (333)
T ss_pred             CCcccCccccChhHhcCC--CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHH
Confidence            346899999999999875  689999999999999999999999988776665554443221 1111      2457899


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           89 RDFILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        89 ~~li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      .+++.+||..+|.+|+++.+++.|+||...
T Consensus       234 ~~li~~~l~~~~~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         234 WDLITKLINDPSRRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             HHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence            999999999999999999999999999974

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.75  E-value=7e-19  Score=119.98  Aligned_cols=99  Identities=26%  Similarity=0.463  Sum_probs=84.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+|++.|+|||++...  .++.++|+||+|+++|+|++|+.||.+.+.......+..... ..+..++..+.+++.+||
T Consensus       157 ~~~g~~~y~aPE~~~~~--~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~li~~~l  233 (318)
T cd05582         157 SFCGTVEYMAPEVVNRR--GHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL-GMPQFLSPEAQSLLRALF  233 (318)
T ss_pred             cccCChhhcCHHHHcCC--CCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHh
Confidence            45789999999999864  578899999999999999999999988877776666665543 456678899999999999


Q ss_pred             ccCCCCCCC-----HHHHhhCcCCCCC
Q 032711           97 QVNPNDRPT-----AAQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rps-----~~~~l~~~~~~~~  118 (135)
                      ..+|.+|++     +.+++.|+||...
T Consensus       234 ~~~P~~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         234 KRNPANRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             hcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence            999999999     6779999999753

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.75  E-value=1.3e-17  Score=110.51  Aligned_cols=97  Identities=26%  Similarity=0.603  Sum_probs=82.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...|+..|+|||.....  .++.++|+|++|++++++++|..||...........+..+..+..+...+.++.+++.+|+
T Consensus       164 ~~~~~~~~~~pe~~~~~--~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  241 (260)
T cd08222         164 TFTGTPYYMSPEALKHQ--GYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSML  241 (260)
T ss_pred             CCCCCcCccCHHHHccC--CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHHHHHh
Confidence            34678899999998654  5788999999999999999999999776666666666555555566678889999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCC
Q 032711           97 QVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~  115 (135)
                      ..+|++||++.+++.||||
T Consensus       242 ~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         242 NKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             cCChhhCcCHHHHhhCCCC
Confidence            9999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.75  E-value=7.4e-18  Score=112.14  Aligned_cols=96  Identities=41%  Similarity=0.768  Sum_probs=76.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC-CCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE-LPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|+..|+|||.+.+.  .++.++|+|++|++++++++|+.||...........+.... .+..+..++..+.+++ +||
T Consensus       169 ~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~  245 (266)
T cd06651         169 VTGTPYWMSPEVISGE--GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCI  245 (266)
T ss_pred             CCccccccCHHHhCCC--CCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHh
Confidence            4588899999999764  57889999999999999999999998766554444443322 2344556778888888 577


Q ss_pred             ccCCCCCCCHHHHhhCcCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~  116 (135)
                      ..+|++||++.+++.||||+
T Consensus       246 ~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         246 FVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             cCChhhCcCHHHHhcCcccc
Confidence            78999999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.75  E-value=1e-17  Score=115.11  Aligned_cols=103  Identities=27%  Similarity=0.458  Sum_probs=77.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHH-------------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFK-------------------------   71 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~-------------------------   71 (135)
                      ...|+..|+|||++.+.  .++.++|+||+|++++++++|+.||...........                         
T Consensus       161 ~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (333)
T cd06650         161 SFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPL  238 (333)
T ss_pred             cCCCCccccCHHHhcCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchh
Confidence            35789999999999764  688999999999999999999999865433221110                         


Q ss_pred             -------------------HHcCCCCCCC-CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           72 -------------------IARGELPPIP-DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        72 -------------------i~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                                         +.....+..+ ...+.++.+|+.+||+.||.+||++.+++.|+||+....+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~~  308 (333)
T cd06650         239 SSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSEAE  308 (333)
T ss_pred             hhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCccc
Confidence                               1111111111 2356788999999999999999999999999999876543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=8.4e-18  Score=111.90  Aligned_cols=99  Identities=31%  Similarity=0.592  Sum_probs=78.2

Q ss_pred             cccccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC--CCcccHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDARDF   91 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~l   91 (135)
                      ...|+..|+|||++...   ...++.++|+|++|++++++++|..||...........+........  +...+..+.++
T Consensus       172 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  251 (275)
T cd06608         172 TFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDF  251 (275)
T ss_pred             CccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHH
Confidence            35688899999988642   13467889999999999999999999987665555555554433222  23367789999


Q ss_pred             HHHhcccCCCCCCCHHHHhhCcCC
Q 032711           92 ILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      +.+||..||.+||++.++++|||+
T Consensus       252 i~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         252 ISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHHHhhcChhhCcCHHHHhcCCCC
Confidence            999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=2.4e-18  Score=118.60  Aligned_cols=99  Identities=30%  Similarity=0.457  Sum_probs=81.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC--CC-CCCCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG--EL-PPIPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~--~~-~~~~~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++.+.  .++.++||||+|+++|+|++|+.||...+.......+...  .. .+....++.++.+++.
T Consensus       189 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~  266 (350)
T cd05573         189 STVGTPDYIAPEVLRGT--PYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLIC  266 (350)
T ss_pred             ccccCccccCHHHHcCC--CCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHH
Confidence            45799999999999875  6899999999999999999999999888766666555541  11 1222336899999999


Q ss_pred             HhcccCCCCCCC-HHHHhhCcCCCCC
Q 032711           94 KCLQVNPNDRPT-AAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~~~p~~Rps-~~~~l~~~~~~~~  118 (135)
                      +|+. +|.+|++ +.+++.||||...
T Consensus       267 ~ll~-dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         267 RLLC-DPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             HHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence            9997 9999999 9999999999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.75  E-value=8.4e-18  Score=112.71  Aligned_cols=97  Identities=28%  Similarity=0.436  Sum_probs=74.0

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC---------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE---------------------   76 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~---------------------   76 (135)
                      ..++..|+|||++.+. ..++.++|+||+|++++++++|+.||.+.........+....                     
T Consensus       161 ~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
T cd07861         161 EVVTLWYRAPEVLLGS-PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTF  239 (285)
T ss_pred             CcccccccChHHhcCC-CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhc
Confidence            3568899999998764 357889999999999999999999998765433322211100                     


Q ss_pred             -------CCCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           77 -------LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        77 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                             .......++.++.+++.+||..||.+||++.+++.|+||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             cccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence                   000123467888999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=3.9e-18  Score=118.21  Aligned_cols=99  Identities=24%  Similarity=0.348  Sum_probs=81.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-CCCC--CcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIP--DSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-~~~~--~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++...  .++.++|+||+||++++|++|..||...+.......+..... ...+  ..++..+.+++.
T Consensus       198 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  275 (364)
T cd05599         198 STVGTPDYIAPEVFLQT--GYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIK  275 (364)
T ss_pred             ccccCccccCHHHHcCC--CCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHH
Confidence            35799999999999764  689999999999999999999999988877666655554322 1222  246789999999


Q ss_pred             HhcccCCCCCCC---HHHHhhCcCCCCC
Q 032711           94 KCLQVNPNDRPT---AAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~~~p~~Rps---~~~~l~~~~~~~~  118 (135)
                      +|+. +|.+|++   +.+++.|+||+..
T Consensus       276 ~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         276 RLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             HHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            9996 8999997   9999999999864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.75  E-value=9.9e-18  Score=112.16  Aligned_cols=97  Identities=27%  Similarity=0.417  Sum_probs=74.3

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC-----------------CCCC
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE-----------------LPPI   80 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~-----------------~~~~   80 (135)
                      ..++..|+|||.+... ..++.++|+||+|++++++++|..||.+.+..+.+..+....                 ....
T Consensus       158 ~~~~~~y~aPE~~~~~-~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (282)
T cd07831         158 YISTRWYRAPECLLTD-GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF  236 (282)
T ss_pred             CCCCcccCChhHhhcC-CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence            4678899999987653 356889999999999999999999998766544333221100                 0000


Q ss_pred             -----------CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           81 -----------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        81 -----------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                                 ....+..+.+++.+||..+|.+||++++++.|+||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence                       12356889999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.75  E-value=7.6e-18  Score=114.58  Aligned_cols=98  Identities=19%  Similarity=0.252  Sum_probs=70.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH---------HHHHHHHHcC------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---------VQALFKIARG------------   75 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~---------~~~~~~i~~~------------   75 (135)
                      ..+||..|+|||++.+. ..++.++|+||+|++++++++|++||.....         ...+..+...            
T Consensus       174 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (317)
T cd07867         174 PVVVTFWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDI  252 (317)
T ss_pred             cceecccccCcHHhcCC-CccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhh
Confidence            35788999999999764 3578999999999999999999999864221         0111111000            


Q ss_pred             ----------------CC---------CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           76 ----------------EL---------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        76 ----------------~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                                      ..         ..........+.+++.+||..||.+||++.++++||||
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         253 RKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                            00         00011234567889999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.75  E-value=1.6e-17  Score=114.01  Aligned_cols=113  Identities=25%  Similarity=0.319  Sum_probs=86.0

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC---C----------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---P----------------   78 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~---~----------------   78 (135)
                      ..++..|+|||.+.+. ..++.++|+|++|++++++++|..||.+.+..+.+..+.....   .                
T Consensus       193 ~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  271 (335)
T PTZ00024        193 KVVTLWYRAPELLMGA-EKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFT  271 (335)
T ss_pred             cccccCCCCChhcccC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccC
Confidence            3567889999998764 3578899999999999999999999988776554443321000   0                


Q ss_pred             --------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCCCCcccc
Q 032711           79 --------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHF  131 (135)
Q Consensus        79 --------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~~~~~~~  131 (135)
                              ......+.++.+++.+||..+|++||++++++.|+||+.........+.|..|
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~~~~~~~~~~~  332 (335)
T PTZ00024        272 PRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLPCDPSQLPFNF  332 (335)
T ss_pred             cCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCCCCcccCChhh
Confidence                    00123467789999999999999999999999999999887776666655544

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.75  E-value=1.2e-17  Score=115.84  Aligned_cols=100  Identities=22%  Similarity=0.325  Sum_probs=78.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-CCCC--CcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIP--DSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-~~~~--~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+..+....+..... ...+  ...+.++.+++.
T Consensus       195 ~~~Gt~~Y~aPE~~~~~--~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~  272 (363)
T cd05628         195 STVGTPDYIAPEVFMQT--GYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLIL  272 (363)
T ss_pred             cccCCccccCHHHHcCC--CCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHH
Confidence            46899999999999874  689999999999999999999999988877776666654321 1222  346788999998


Q ss_pred             Hhcc--cCCCCCCCHHHHhhCcCCCCC
Q 032711           94 KCLQ--VNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~--~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      +++.  .++..||++++++.||||...
T Consensus       273 ~l~~~~~~r~~r~~~~ei~~hp~f~~~  299 (363)
T cd05628         273 RFCCEWEHRIGAPGVEEIKTNPFFEGV  299 (363)
T ss_pred             HHcCChhhcCCCCCHHHHhCCCCCCCC
Confidence            8654  233356899999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.75  E-value=1.2e-18  Score=115.26  Aligned_cols=120  Identities=22%  Similarity=0.344  Sum_probs=93.6

Q ss_pred             hhhhhhhhhhhh------cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHc
Q 032711            5 TVEGLGNALRRK------WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW----VQALFKIAR   74 (135)
Q Consensus         5 ~~~~~~~~~~~~------~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~----~~~~~~i~~   74 (135)
                      ++.++|.+....      +.|-|+.|.|||++...  +|+..+|+||+|+++|-+++|.+||.....    ...-.+|..
T Consensus       204 KLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~e--KydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~  281 (400)
T KOG0604|consen  204 KLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRT  281 (400)
T ss_pred             EecccccccccCCCccccCCcccccccCHHHhCch--hcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhc
Confidence            456777666655      34679999999999876  699999999999999999999999954322    223345666


Q ss_pred             CCCC---CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCCC
Q 032711           75 GELP---PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP  126 (135)
Q Consensus        75 ~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~~  126 (135)
                      +.+.   +-+..++..++++|+++|..+|.+|.++++++.|||++....-.....
T Consensus       282 gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tpl  336 (400)
T KOG0604|consen  282 GQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTPL  336 (400)
T ss_pred             cCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCCc
Confidence            6552   234567899999999999999999999999999999998665444433

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.75  E-value=6e-18  Score=113.39  Aligned_cols=100  Identities=17%  Similarity=0.311  Sum_probs=77.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW----VQALFKIARGELPPIPDSVSRDARDFIL   93 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~li~   93 (135)
                      ..|+..|+|||++...  .++.++|+||+|+++|++++|..||.....    ......+...........++.++.+++.
T Consensus       154 ~~~~~~y~aPE~~~~~--~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (277)
T cd05607         154 RAGTNGYMAPEILKEE--PYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICR  231 (277)
T ss_pred             cCCCCCccCHHHHccC--CCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHH
Confidence            5789999999999775  589999999999999999999999975432    1222222222222222457889999999


Q ss_pred             HhcccCCCCCCCH----HHHhhCcCCCCCC
Q 032711           94 KCLQVNPNDRPTA----AQLMEHPFVKRPL  119 (135)
Q Consensus        94 ~~l~~~p~~Rps~----~~~l~~~~~~~~~  119 (135)
                      +||..+|.+|+++    ++++.|+||....
T Consensus       232 ~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~  261 (277)
T cd05607         232 LFLAKKPEDRLGSREKNDDPRKHEFFKTIN  261 (277)
T ss_pred             HHhccCHhhCCCCccchhhhhcChhhcCCC
Confidence            9999999999999    6778999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.75  E-value=1.6e-17  Score=114.13  Aligned_cols=105  Identities=27%  Similarity=0.422  Sum_probs=77.6

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc---C-------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR---G-------------------   75 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~---~-------------------   75 (135)
                      ..|+..|+|||.+.+. ..++.++|+||+|+++++|++|+.||.+.+.......+..   .                   
T Consensus       169 ~~~~~~y~aPE~~~~~-~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (336)
T cd07849         169 YVATRWYRAPEIMLNS-KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIK  247 (336)
T ss_pred             cCcCCCccChHHhhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHh
Confidence            4688899999988653 3578899999999999999999999976543322211110   0                   


Q ss_pred             --CC-CC-----CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCC
Q 032711           76 --EL-PP-----IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSW  123 (135)
Q Consensus        76 --~~-~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~  123 (135)
                        .. ..     .....+.++.+++.+||..+|.+||++.+++.||||........
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~  303 (336)
T cd07849         248 SLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSD  303 (336)
T ss_pred             hcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCC
Confidence              00 00     01234677899999999999999999999999999997665433

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=7.4e-18  Score=113.36  Aligned_cols=100  Identities=21%  Similarity=0.361  Sum_probs=79.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHH---HHHcCCCCCCCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF---KIARGELPPIPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~li~   93 (135)
                      ..+|+..|+|||++...  .++.++|+||+|+++|++++|..||.+.+......   ..........+..++..+.+++.
T Consensus       160 ~~~~~~~y~aPE~~~~~--~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  237 (285)
T cd05605         160 GRVGTVGYMAPEVVKNE--RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICR  237 (285)
T ss_pred             cccCCCCccCcHHhcCC--CCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHH
Confidence            35789999999999764  68889999999999999999999998765432221   11222223445568889999999


Q ss_pred             HhcccCCCCCC-----CHHHHhhCcCCCCC
Q 032711           94 KCLQVNPNDRP-----TAAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~~~p~~Rp-----s~~~~l~~~~~~~~  118 (135)
                      +||..||.+|+     ++++++.|+||...
T Consensus       238 ~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05605         238 QLLTKDPGFRLGCRGEGAEEVKAHPFFRTA  267 (285)
T ss_pred             HHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence            99999999999     89999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=1.2e-17  Score=111.81  Aligned_cols=101  Identities=35%  Similarity=0.604  Sum_probs=82.3

Q ss_pred             ccccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARDFI   92 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li   92 (135)
                      ..|+..|++||++...   ...++.++|+|++|+++|++++|..||...+.......+.....+  ..+..++.++.+++
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (280)
T cd06611         163 FIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFL  242 (280)
T ss_pred             eecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHH
Confidence            4688999999998632   124677899999999999999999999887766655555544332  23456788999999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      .+||..+|.+||++.++++|+|+...
T Consensus       243 ~~~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         243 KSCLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             HHHhccChhhCcCHHHHhcChhhccc
Confidence            99999999999999999999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.75  E-value=1.1e-17  Score=112.11  Aligned_cols=93  Identities=18%  Similarity=0.411  Sum_probs=79.9

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..++..|+|||.+...  .++.++|+||+|++++++++ |..||.+....+....+........+..++.++.+++.+||
T Consensus       186 ~~~~~~y~aPE~~~~~--~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~  263 (283)
T cd05048         186 SLLPVRWMPPEAILYG--KFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECW  263 (283)
T ss_pred             CcccccccCHHHhccC--cCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHc
Confidence            4567889999998764  68999999999999999998 99999887777777777666666667788999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..+|.+||++.+++.+
T Consensus       264 ~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         264 NEIPARRPRFKDIHTR  279 (283)
T ss_pred             cCChhhCcCHHHHHHH
Confidence            9999999999998763

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.74  E-value=2.1e-17  Score=109.28  Aligned_cols=97  Identities=25%  Similarity=0.504  Sum_probs=83.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...|+..|+|||++.+.  .++.++|+||+|++++++++|..||......+....+..+...+.+...+.++.+++.+||
T Consensus       160 ~~~~~~~y~ape~~~~~--~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  237 (256)
T cd08221         160 TVVGTPYYMSPELCQGV--KYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLL  237 (256)
T ss_pred             ccCCCccccCHhhcCCC--CCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHc
Confidence            35688999999998764  5788899999999999999999999887777777676666665556677899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCC
Q 032711           97 QVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~  115 (135)
                      ..+|.+||++.++++|+|+
T Consensus       238 ~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         238 QQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             ccCcccCCCHHHHhhCcCC
Confidence            9999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.74  E-value=1.4e-17  Score=109.70  Aligned_cols=96  Identities=33%  Similarity=0.683  Sum_probs=83.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      ..|++.|+|||.....  .++.++|+|++|++++++++|..||...+..+....+........+...+..+.+++.+||.
T Consensus       163 ~~~~~~y~~pe~~~~~--~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  240 (258)
T cd08215         163 VVGTPYYLSPELCQNK--PYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQ  240 (258)
T ss_pred             eeeeecccChhHhccC--CCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            4678899999998764  57889999999999999999999998877666666666666666677888999999999999


Q ss_pred             cCCCCCCCHHHHhhCcCC
Q 032711           98 VNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        98 ~~p~~Rps~~~~l~~~~~  115 (135)
                      .+|++||++.+++.||||
T Consensus       241 ~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         241 KDPEERPSIAQILQSPFI  258 (258)
T ss_pred             CChhhCcCHHHHhcCCCC
Confidence            999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.74  E-value=2.6e-17  Score=111.39  Aligned_cols=105  Identities=30%  Similarity=0.485  Sum_probs=84.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li~~   94 (135)
                      ...|+..|+|||++...  .++.++|+|++|++++++++|+.||...........+......  ......+..+.+++.+
T Consensus       176 ~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~  253 (297)
T cd06659         176 SLVGTPYWMAPEVISRT--PYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLER  253 (297)
T ss_pred             ceecCccccCHHHHccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHH
Confidence            35788999999999764  5789999999999999999999999877665555554433221  2233567889999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPLPTSW  123 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~~~~~  123 (135)
                      |+..+|.+||+++++++|+||.......-
T Consensus       254 ~l~~~P~~Rps~~~ll~~~~~~~~~~~~~  282 (297)
T cd06659         254 MLTREPQERATAQELLDHPFLLQTGLPEC  282 (297)
T ss_pred             HhcCCcccCcCHHHHhhChhhccCCCccc
Confidence            99999999999999999999998654433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.74  E-value=3.3e-18  Score=113.26  Aligned_cols=100  Identities=30%  Similarity=0.562  Sum_probs=82.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC--CCC-----------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG--ELP-----------------   78 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~--~~~-----------------   78 (135)
                      .+.|.+|.|||.+.+. ..|+..+|||++||++.||++|.+.|.+..+.+++..|.+.  ...                 
T Consensus       161 YVATRWYRaPELLvGD-tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~  239 (396)
T KOG0593|consen  161 YVATRWYRAPELLVGD-TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVR  239 (396)
T ss_pred             hhhhhhccChhhhccc-CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeee
Confidence            4778999999999985 48999999999999999999999999999988888777542  110                 


Q ss_pred             -CCC----------CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           79 -PIP----------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        79 -~~~----------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                       +.+          ...+.-+.+++..||..||.+|++.++++.|+||.+.
T Consensus       240 lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~  290 (396)
T KOG0593|consen  240 LPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGF  290 (396)
T ss_pred             cCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHH
Confidence             011          1234567899999999999999999999999999753

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.74  E-value=1.3e-17  Score=111.80  Aligned_cols=102  Identities=32%  Similarity=0.496  Sum_probs=81.7

Q ss_pred             cccccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--CCCCCcccHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--PPIPDSVSRDARDF   91 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~l   91 (135)
                      ...|+..|+|||++...   ...++.++|+||+|++++++++|..||...+.......+.....  ...+..++..+.++
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  241 (282)
T cd06643         162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDF  241 (282)
T ss_pred             cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHH
Confidence            35688999999998531   12467899999999999999999999987776555555544332  23345678899999


Q ss_pred             HHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           92 ILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      +.+||..+|.+||++.++++|+|+...
T Consensus       242 i~~~l~~~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         242 LKKCLEKNVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             HHHHccCChhhCcCHHHHhcCCCEecc
Confidence            999999999999999999999999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.74  E-value=8e-18  Score=112.58  Aligned_cols=100  Identities=29%  Similarity=0.529  Sum_probs=81.3

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      ..|+..|+|||.+.+.  .++.++|+|++|++++++++|..|+...........+............+..+.+++.+|+.
T Consensus       161 ~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (277)
T cd06642         161 FVGTPFWMAPEVIKQS--AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLN  238 (277)
T ss_pred             ccCcccccCHHHhCcC--CCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHcc
Confidence            4688899999999764  57889999999999999999999987665544444443333334455677889999999999


Q ss_pred             cCCCCCCCHHHHhhCcCCCCCC
Q 032711           98 VNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        98 ~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      .+|.+||++.+++.|+|+....
T Consensus       239 ~~p~~Rp~~~~il~~~~~~~~~  260 (277)
T cd06642         239 KDPRFRPTAKELLKHKFITRYT  260 (277)
T ss_pred             CCcccCcCHHHHHHhHHHHHHh
Confidence            9999999999999999987643

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.74  E-value=8.6e-18  Score=115.52  Aligned_cols=111  Identities=23%  Similarity=0.299  Sum_probs=81.5

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc---C-------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR---G-------------------   75 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~---~-------------------   75 (135)
                      ..|+..|+|||.+... ..++.++|+|++|++++++++|+.||.+.+.......+..   .                   
T Consensus       168 ~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (337)
T cd07858         168 YVVTRWYRAPELLLNC-SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIR  246 (337)
T ss_pred             cccccCccChHHHhcC-CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHH
Confidence            4678899999998753 2578899999999999999999999976654322221110   0                   


Q ss_pred             --CC------CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCCCCcc
Q 032711           76 --EL------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPH  129 (135)
Q Consensus        76 --~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~~~~~  129 (135)
                        ..      .......+..+.+++.+||..+|.+||++++++.|+||............+.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~~~~~~  308 (337)
T cd07858         247 SLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDEPVCQT  308 (337)
T ss_pred             hcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccCccCCC
Confidence              00      0012346788899999999999999999999999999998666554443333

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.74  E-value=1.9e-17  Score=110.26  Aligned_cols=98  Identities=37%  Similarity=0.770  Sum_probs=76.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH-HHHHHH-HcCCCCCCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV-QALFKI-ARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~-~~~~~i-~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ..|+..|+|||.+......++.++|+||+|++++++++|..||...... .....+ .....+..+...+.++.+++.+|
T Consensus       169 ~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  248 (268)
T cd06624         169 FTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRC  248 (268)
T ss_pred             CCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHH
Confidence            4578899999998764334788999999999999999999998754322 222222 12223345667888999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~  115 (135)
                      |..+|.+||++.+++.||||
T Consensus       249 l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         249 FEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             cCCCchhCCCHHHHHhCCCC
Confidence            99999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.74  E-value=1e-17  Score=116.60  Aligned_cols=102  Identities=28%  Similarity=0.432  Sum_probs=83.0

Q ss_pred             cccccccccchhhhhccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-CCCC--CcccHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKN--GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIP--DSVSRDARDF   91 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~--~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-~~~~--~~~~~~~~~l   91 (135)
                      ..+||+.|+|||++....  ..++.++|+||+|+++|+|++|+.||.+.+....+..+..... ...+  ..++.++.++
T Consensus       202 ~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  281 (370)
T cd05596         202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDL  281 (370)
T ss_pred             CCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHH
Confidence            457999999999987531  2478899999999999999999999998877766666654332 2223  3568999999


Q ss_pred             HHHhcccCCCC--CCCHHHHhhCcCCCCC
Q 032711           92 ILKCLQVNPND--RPTAAQLMEHPFVKRP  118 (135)
Q Consensus        92 i~~~l~~~p~~--Rps~~~~l~~~~~~~~  118 (135)
                      +.+||..+|.+  |+++.+++.|+||...
T Consensus       282 i~~~L~~~p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         282 ICAFLTDREVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             HHHHccChhhccCCCCHHHHhcCcccCCC
Confidence            99999988887  9999999999999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.74  E-value=4.7e-18  Score=118.60  Aligned_cols=99  Identities=29%  Similarity=0.431  Sum_probs=79.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC---CCCCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~li~   93 (135)
                      +.+||+.|+|||++.+.  .++.++|+||+||++|+|++|..||.+.+..+....+.....   .+.....++++.+++.
T Consensus       207 ~~~gt~~Y~aPE~~~~~--~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~  284 (382)
T cd05625         207 SLVGTPNYIAPEVLLRT--GYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLII  284 (382)
T ss_pred             ccccCcccCCHHHhcCC--CCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHH
Confidence            46899999999999864  689999999999999999999999988776655555543221   1223457889999998


Q ss_pred             HhcccCCCCCCC---HHHHhhCcCCCCC
Q 032711           94 KCLQVNPNDRPT---AAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~~~p~~Rps---~~~~l~~~~~~~~  118 (135)
                      +++ .+|.+|++   +++++.||||...
T Consensus       285 ~l~-~~p~~R~~~~~~~ei~~hp~f~~~  311 (382)
T cd05625         285 KLC-RGPEDRLGKNGADEIKAHPFFKTI  311 (382)
T ss_pred             HHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence            876 58999987   9999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.74  E-value=9.7e-18  Score=113.41  Aligned_cols=104  Identities=34%  Similarity=0.560  Sum_probs=82.6

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--CCCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--PPIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~li~~~   95 (135)
                      ..|++.|++||.+.+.  .++.++|+|++|++++++++|..||...+.......+.....  ...+...+..+.+++.+|
T Consensus       175 ~~~~~~y~aPE~~~~~--~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  252 (297)
T cd06656         175 MVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRC  252 (297)
T ss_pred             ccCCccccCHHHHcCC--CCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHH
Confidence            4688899999999764  578999999999999999999999977654333322222211  123456778899999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPLPTSW  123 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~~~~~  123 (135)
                      |..+|.+||++.+++.|+||....+...
T Consensus       253 l~~~p~~Rps~~~il~~~~~~~~~~~~~  280 (297)
T cd06656         253 LEMDVDRRGSAKELLQHPFLKLAKPLSS  280 (297)
T ss_pred             ccCChhhCcCHHHHhcCchhcccccccc
Confidence            9999999999999999999998776554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.74  E-value=3.2e-17  Score=111.32  Aligned_cols=101  Identities=22%  Similarity=0.264  Sum_probs=77.8

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC---------------------
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---------------------   77 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~---------------------   77 (135)
                      .++..|+|||++.+. ..++.++|+|++|++++++++|..||.+.+....+..+.....                     
T Consensus       169 ~~~~~y~aPE~~~~~-~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (309)
T cd07845         169 VVTLWYRAPELLLGC-TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTL  247 (309)
T ss_pred             cccccccChhhhcCC-CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccc
Confidence            456789999998764 3578899999999999999999999988776655544432100                     


Q ss_pred             CCCC--------CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           78 PPIP--------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        78 ~~~~--------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      ...+        ...++.+.+++.+||..||++||++++++.|+||.....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~  298 (309)
T cd07845         248 PKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPL  298 (309)
T ss_pred             cCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCC
Confidence            0000        124678899999999999999999999999999986443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.74  E-value=2.2e-17  Score=109.53  Aligned_cols=99  Identities=21%  Similarity=0.392  Sum_probs=81.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHHHc-CCCCCCCCcccHHHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WVQALFKIAR-GELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~--~~~~~~~i~~-~~~~~~~~~~~~~~~~li~~   94 (135)
                      ..|+..|++||.+...  .++.++|+|++|+++|++++|..||....  .......+.. ......+...+..+.+++.+
T Consensus       152 ~~~~~~~~~PE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  229 (262)
T cd05572         152 FCGTPEYVAPEIILNK--GYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQ  229 (262)
T ss_pred             ccCCcCccChhHhcCC--CCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHH
Confidence            4678899999998764  57899999999999999999999997765  4444444443 22334556668899999999


Q ss_pred             hcccCCCCCCC-----HHHHhhCcCCCCC
Q 032711           95 CLQVNPNDRPT-----AAQLMEHPFVKRP  118 (135)
Q Consensus        95 ~l~~~p~~Rps-----~~~~l~~~~~~~~  118 (135)
                      ||..+|.+|++     +.++++||||+..
T Consensus       230 ~l~~~p~~R~~~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         230 LLRRNPEERLGNLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             HccCChhhCcCCcccCHHHHhcChhhhCC
Confidence            99999999999     9999999999875

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=1.4e-17  Score=111.29  Aligned_cols=102  Identities=29%  Similarity=0.497  Sum_probs=80.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCC-cccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPD-SVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~li~~~   95 (135)
                      ...|+..|+|||.+... ..++.++|+|++|+++|++++|..||.+.........+.....+..+. ..+.++.+++.+|
T Consensus       160 ~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  238 (277)
T cd06917         160 TFVGTPYWMAPEVITEG-KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAAC  238 (277)
T ss_pred             cccCCcceeCHHHhccC-CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHH
Confidence            34688899999998653 346889999999999999999999998776554443333332223333 3778999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      |..+|++||++.+++.|+|+....
T Consensus       239 l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         239 LDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             cCCCcccCcCHHHHhhChHhhccc
Confidence            999999999999999999997644

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.74  E-value=6.8e-18  Score=115.51  Aligned_cols=98  Identities=20%  Similarity=0.336  Sum_probs=82.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+..+.+..+..... ..+...+..+.+++.+||
T Consensus       155 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~l  231 (325)
T cd05602         155 TFCGTPEYLAPEVLHKQ--PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL-QLKPNITNSARHLLEGLL  231 (325)
T ss_pred             cccCCccccCHHHHcCC--CCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc-CCCCCCCHHHHHHHHHHc
Confidence            45799999999999874  688999999999999999999999988777666666554433 345568899999999999


Q ss_pred             ccCCCCCCCHH----HHhhCcCCCC
Q 032711           97 QVNPNDRPTAA----QLMEHPFVKR  117 (135)
Q Consensus        97 ~~~p~~Rps~~----~~l~~~~~~~  117 (135)
                      +.+|.+|+++.    +++.|+||..
T Consensus       232 ~~~p~~R~~~~~~~~~i~~~~~~~~  256 (325)
T cd05602         232 QKDRTKRLGAKDDFMEIKNHIFFSP  256 (325)
T ss_pred             ccCHHHCCCCCCCHHHHhcCcccCC
Confidence            99999999865    7889999865

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.73  E-value=1.9e-17  Score=111.05  Aligned_cols=97  Identities=30%  Similarity=0.494  Sum_probs=73.9

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--------------------   77 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--------------------   77 (135)
                      ..++..|+|||++.+. ..++.++|+|++|++++++++|+.||...+..+...++.....                    
T Consensus       160 ~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07860         160 EVVTLWYRAPEILLGC-KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSF  238 (284)
T ss_pred             ccccccccCCeEEecC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhc
Confidence            3567889999988764 2468889999999999999999999977665443333221100                    


Q ss_pred             C--------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           78 P--------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        78 ~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      .        .....++.++.+++.+|+..||.+||++++++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         239 PKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             ccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            0        0112356788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.73  E-value=3e-17  Score=113.46  Aligned_cols=101  Identities=26%  Similarity=0.412  Sum_probs=76.2

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC---------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE---------------------   76 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~---------------------   76 (135)
                      ..|+..|+|||.+.+.  .++.++|+||+|+++++|++|+.||...+.......+....                     
T Consensus       177 ~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (353)
T cd07850         177 YVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVEN  254 (353)
T ss_pred             CcccccccCHHHHhCC--CCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhc
Confidence            4678899999999875  68999999999999999999999997665433322221100                     


Q ss_pred             -C--C-------------C-----CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           77 -L--P-------------P-----IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        77 -~--~-------------~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                       .  .             +     .+...+..+.+++.+||..||.+||++.+++.|+|++.+..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~  319 (353)
T cd07850         255 RPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYD  319 (353)
T ss_pred             CCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccC
Confidence             0  0             0     01123556889999999999999999999999999986544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.73  E-value=3.8e-18  Score=116.72  Aligned_cols=99  Identities=21%  Similarity=0.326  Sum_probs=83.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++++|++|..||...+..+....+..... ..+...+..+.+++.+|+
T Consensus       155 ~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~ll  231 (325)
T cd05604         155 TFCGTPEYLAPEVIRKQ--PYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL-VLRPGASLTAWSILEELL  231 (325)
T ss_pred             cccCChhhCCHHHHcCC--CCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc-cCCCCCCHHHHHHHHHHh
Confidence            45799999999999774  688999999999999999999999988777666666655443 334467889999999999


Q ss_pred             ccCCCCCCCH----HHHhhCcCCCCC
Q 032711           97 QVNPNDRPTA----AQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rps~----~~~l~~~~~~~~  118 (135)
                      ..+|.+|+++    .+++.|+||...
T Consensus       232 ~~~p~~R~~~~~~~~~i~~h~~f~~~  257 (325)
T cd05604         232 EKDRQRRLGAKEDFLEIQEHPFFESL  257 (325)
T ss_pred             ccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence            9999999976    589999999863

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.73  E-value=3.5e-17  Score=108.12  Aligned_cols=98  Identities=56%  Similarity=0.925  Sum_probs=80.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc-CCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR-GELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...|+..|++||.+.... .++.++|+|++|++++++++|..||...........+.. ......+..++..+.+++.+|
T Consensus       160 ~~~~~~~y~~pe~~~~~~-~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  238 (258)
T cd06632         160 SFKGSPYWMAPEVIAQQG-GYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKC  238 (258)
T ss_pred             ccCCCcceeCHHHhcCCC-CCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHH
Confidence            456888999999987642 378899999999999999999999977665555555444 233345667789999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~  115 (135)
                      |..+|.+||++++++.|||+
T Consensus       239 l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         239 LQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             hhcCcccCcCHHHHhcCCCC
Confidence            99999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.73  E-value=2.8e-17  Score=110.15  Aligned_cols=97  Identities=29%  Similarity=0.529  Sum_probs=74.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC--------------------C
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE--------------------L   77 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~--------------------~   77 (135)
                      ..++..|+|||++.+. ..++.++|+||+|++++++++|..||.+.+..+....+.+..                    .
T Consensus       160 ~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T cd07847         160 YVATRWYRAPELLVGD-TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS  238 (286)
T ss_pred             cccccccCCHHHHhCC-CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence            4578899999998764 357889999999999999999999998766544443322100                    0


Q ss_pred             CCC----------CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           78 PPI----------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        78 ~~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      .+.          ....+..+.+++.+||..+|++||++.+++.|+||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            000          12356778999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.73  E-value=1.9e-17  Score=111.23  Aligned_cols=102  Identities=26%  Similarity=0.482  Sum_probs=78.1

Q ss_pred             ccccccccchhhhhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHHHcCCCCCC----CCcccHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIARGELPPI----PDSVSRDARDF   91 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~-~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~-~~~~~~i~~~~~~~~----~~~~~~~~~~l   91 (135)
                      ..|+..|+|||++.... ..++.++|+|++|++++++++|+.||..... ......+.....+..    +..++.++.++
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  246 (288)
T cd06616         167 DAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNF  246 (288)
T ss_pred             ccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHH
Confidence            46888999999987631 2578899999999999999999999976542 222333322222222    22467889999


Q ss_pred             HHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           92 ILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      +.+||..+|.+||++.+++.|+||....
T Consensus       247 i~~~l~~~p~~Rpt~~~i~~~~~~~~~~  274 (288)
T cd06616         247 INLCLIKDESKRPKYKELLEHPFIKDYE  274 (288)
T ss_pred             HHHHccCChhhCcCHHHHhcChhhhchh
Confidence            9999999999999999999999998643

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.73  E-value=2.9e-17  Score=110.72  Aligned_cols=101  Identities=37%  Similarity=0.579  Sum_probs=79.7

Q ss_pred             ccccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARDFI   92 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li   92 (135)
                      ..|+..|+|||.+...   ...++.++|+||+|+++|++++|..||...+.......+.....+  ..+..++.++.+++
T Consensus       170 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  249 (292)
T cd06644         170 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFL  249 (292)
T ss_pred             ecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHH
Confidence            4678899999998531   134688899999999999999999999776655555544433222  23455678899999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      .+||..+|++||+++++++|+|+...
T Consensus       250 ~~~l~~~p~~Rp~~~~il~~~~~~~~  275 (292)
T cd06644         250 KTALDKHPETRPSAAQLLEHPFVSSV  275 (292)
T ss_pred             HHHhcCCcccCcCHHHHhcCcccccc
Confidence            99999999999999999999999763

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.73  E-value=2.4e-17  Score=109.22  Aligned_cols=99  Identities=34%  Similarity=0.676  Sum_probs=82.1

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---cHHHHHHHHHcCCCCCCCCc-ccHHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV---EWVQALFKIARGELPPIPDS-VSRDARDFIL   93 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~---~~~~~~~~i~~~~~~~~~~~-~~~~~~~li~   93 (135)
                      ..|+..|+|||.+...  .++.++|+|++|++++++++|..||...   ........+........+.. ++..+.+++.
T Consensus       160 ~~~~~~y~~pE~~~~~--~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  237 (264)
T cd06623         160 FVGTVTYMSPERIQGE--SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFIS  237 (264)
T ss_pred             eeecccccCHhhhCCC--CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHH
Confidence            4678899999998764  6788999999999999999999999776   34445555555544455555 7889999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      +|+..+|++||++++++.|+|+...
T Consensus       238 ~~l~~~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         238 ACLQKDPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             HHccCChhhCCCHHHHHhCHHHHhc
Confidence            9999999999999999999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.73  E-value=9e-18  Score=119.71  Aligned_cols=113  Identities=25%  Similarity=0.372  Sum_probs=86.6

Q ss_pred             hhhhhhhhhhhhc----ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC-
Q 032711            5 TVEGLGNALRRKW----HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP-   79 (135)
Q Consensus         5 ~~~~~~~~~~~~~----~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~-   79 (135)
                      ++.|||.+.....    .+-+..|.|||++++-  +|+.+.|+||+||++.||.+|.+.|.+.+..+++..|..-...+ 
T Consensus       331 KVIDFGSSc~~~q~vytYiQSRfYRAPEVILGl--pY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp  408 (586)
T KOG0667|consen  331 KVIDFGSSCFESQRVYTYIQSRFYRAPEVILGL--PYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPP  408 (586)
T ss_pred             eEEecccccccCCcceeeeeccccccchhhccC--CCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCC
Confidence            3556665554433    3557799999999985  89999999999999999999999999998888877664310000 


Q ss_pred             --------------------------------------------------CC-C----------cccHHHHHHHHHhccc
Q 032711           80 --------------------------------------------------IP-D----------SVSRDARDFILKCLQV   98 (135)
Q Consensus        80 --------------------------------------------------~~-~----------~~~~~~~~li~~~l~~   98 (135)
                                                                        .| .          .....+.+|+.+||.+
T Consensus       409 ~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~  488 (586)
T KOG0667|consen  409 PKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEW  488 (586)
T ss_pred             HHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhcc
Confidence                                                              11 0          1123568999999999


Q ss_pred             CCCCCCCHHHHhhCcCCCCCC
Q 032711           99 NPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        99 ~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      ||..|++..++++|||+....
T Consensus       489 dP~~R~tp~qal~Hpfl~~~~  509 (586)
T KOG0667|consen  489 DPAERITPAQALNHPFLTGTS  509 (586)
T ss_pred             CchhcCCHHHHhcCccccccc
Confidence            999999999999999999533

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.73  E-value=1.3e-17  Score=112.21  Aligned_cols=98  Identities=23%  Similarity=0.439  Sum_probs=77.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH---HHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---VQALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ..|+..|+|||++...  .++.++|+||+|++++++++|..||.....   ......+........+...+..+.+++.+
T Consensus       161 ~~g~~~y~aPE~~~~~--~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  238 (285)
T cd05630         161 RVGTVGYMAPEVVKNE--RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKM  238 (285)
T ss_pred             CCCCccccChHHHcCC--CCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHH
Confidence            4789999999999764  688999999999999999999999976432   11222222221223445678889999999


Q ss_pred             hcccCCCCCCC-----HHHHhhCcCCCC
Q 032711           95 CLQVNPNDRPT-----AAQLMEHPFVKR  117 (135)
Q Consensus        95 ~l~~~p~~Rps-----~~~~l~~~~~~~  117 (135)
                      ||..+|.+|++     +++++.|+||+.
T Consensus       239 ~l~~~p~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         239 LLCKDPKERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             HhhcCHHHccCCCCCchHHHHcChhhhc
Confidence            99999999999     899999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.73  E-value=1e-17  Score=114.43  Aligned_cols=98  Identities=21%  Similarity=0.344  Sum_probs=82.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++...  .++.++|+||+|+++|+|++|..||.+.+.......+..... ..+...+..+.+++.+||
T Consensus       155 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~l  231 (321)
T cd05603         155 TFCGTPEYLAPEVLRKE--PYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPL-QLPGGKTVAACDLLVGLL  231 (321)
T ss_pred             cccCCcccCCHHHhcCC--CCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCC-CCCCCCCHHHHHHHHHHc
Confidence            45789999999999764  688999999999999999999999988876666666555433 456677889999999999


Q ss_pred             ccCCCCCCCH----HHHhhCcCCCC
Q 032711           97 QVNPNDRPTA----AQLMEHPFVKR  117 (135)
Q Consensus        97 ~~~p~~Rps~----~~~l~~~~~~~  117 (135)
                      ..+|.+|+++    .+++.|+||..
T Consensus       232 ~~~p~~R~~~~~~~~~~~~~~~~~~  256 (321)
T cd05603         232 HKDQRRRLGAKADFLEIKNHVFFSP  256 (321)
T ss_pred             cCCHhhcCCCCCCHHHHhCCCCcCC
Confidence            9999999875    58999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.73  E-value=2.1e-17  Score=110.72  Aligned_cols=97  Identities=27%  Similarity=0.494  Sum_probs=74.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC--------------------C
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE--------------------L   77 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~--------------------~   77 (135)
                      ..++..|+|||++.+. ..++.++|+|++|++++++++|+.||...+.......+....                    .
T Consensus       159 ~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T cd07835         159 EVVTLWYRAPEILLGS-RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTF  237 (283)
T ss_pred             cccccCCCCCceeecC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhc
Confidence            3567889999988764 246889999999999999999999998766544333321110                    0


Q ss_pred             --------CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           78 --------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        78 --------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                              .......+..+.+++.+|++.+|.+||++++++.|+||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         238 PKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             ccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence                    01123456788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.73  E-value=3.3e-17  Score=110.01  Aligned_cols=105  Identities=33%  Similarity=0.585  Sum_probs=83.1

Q ss_pred             cccccccccchhhhhccC----CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHH---HHHHHcCCCCCCCCcccHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKN----GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQA---LFKIARGELPPIPDSVSRDAR   89 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~----~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~   89 (135)
                      +..|+..|+|||.+....    ..++.++|+|++|++++++++|+.||........   ...+........+..++.++.
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T cd06622         160 TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQ  239 (286)
T ss_pred             cCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHH
Confidence            346788999999986531    1357889999999999999999999976544332   233444444556667889999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           90 DFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      +++.+||..+|.+||++.+++.|+||......
T Consensus       240 ~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~  271 (286)
T cd06622         240 DFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA  271 (286)
T ss_pred             HHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence            99999999999999999999999999876655

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.73  E-value=2.8e-17  Score=109.99  Aligned_cols=101  Identities=29%  Similarity=0.491  Sum_probs=83.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...|+..|++||.+...  .++.++|+|++|++++++++|..||...........+........+..++..+.+++.+|+
T Consensus       160 ~~~~~~~y~~PE~~~~~--~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  237 (277)
T cd06641         160 TFVGTPFWMAPEVIKQS--AYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACL  237 (277)
T ss_pred             cccCCccccChhhhccC--CCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHc
Confidence            34688899999998764  5788999999999999999999999876655555555444444455667889999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      ..+|.+||++.+++.|+||....
T Consensus       238 ~~~p~~Rp~~~~~l~~~~~~~~~  260 (277)
T cd06641         238 NKEPSFRPTAKELLKHKFIVRFA  260 (277)
T ss_pred             cCChhhCcCHHHHHhCHHHhhhh
Confidence            99999999999999999998743

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.73  E-value=5.2e-18  Score=118.13  Aligned_cols=98  Identities=31%  Similarity=0.445  Sum_probs=79.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC---CCCCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++.+.  .++.++||||+||++|+|++|+.||.+.+..+....+.....   .+....++.++.+++.
T Consensus       203 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  280 (376)
T cd05598         203 SLVGTPNYIAPEVLLRT--GYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLIL  280 (376)
T ss_pred             ccCCCccccCHHHHcCC--CCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHH
Confidence            46899999999999774  689999999999999999999999988776665555543322   1223357889999999


Q ss_pred             HhcccCCCCCC---CHHHHhhCcCCCC
Q 032711           94 KCLQVNPNDRP---TAAQLMEHPFVKR  117 (135)
Q Consensus        94 ~~l~~~p~~Rp---s~~~~l~~~~~~~  117 (135)
                      +|+ .+|.+|+   ++.+++.|+||..
T Consensus       281 ~l~-~~p~~R~~~~t~~ell~h~~~~~  306 (376)
T cd05598         281 RLC-CGAEDRLGKNGADEIKAHPFFKG  306 (376)
T ss_pred             HHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence            876 5999999   8999999999986

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.73  E-value=2.8e-17  Score=111.72  Aligned_cols=103  Identities=27%  Similarity=0.476  Sum_probs=76.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc----------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR----------------------   74 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~----------------------   74 (135)
                      ..+|+..|+|||++.+.  .++.++|+|++|++++++++|..||...+.......+..                      
T Consensus       157 ~~~~~~~~~aPE~~~~~--~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (308)
T cd06615         157 SFVGTRSYMSPERLQGT--HYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSP  234 (308)
T ss_pred             cCCCCcCccChhHhcCC--CCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCcc
Confidence            45788999999998764  578899999999999999999999865443221111110                      


Q ss_pred             --------------CCCCCCC-CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           75 --------------GELPPIP-DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        75 --------------~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                                    ...+..+ ..++.++.+++.+||..+|++||++.+++.|+||.....+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~  296 (308)
T cd06615         235 RPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAELE  296 (308)
T ss_pred             chhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcccc
Confidence                          0001111 1356789999999999999999999999999999875444

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.73  E-value=5.2e-17  Score=110.65  Aligned_cols=104  Identities=32%  Similarity=0.590  Sum_probs=82.7

Q ss_pred             cccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC-CCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI-PDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~li~~   94 (135)
                      ...|+..|+|||++... ...++.++|+||+|++++++++|..||...+.......+.....+.. ....+..+.+++.+
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  255 (313)
T cd06633         176 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDY  255 (313)
T ss_pred             CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHH
Confidence            35788899999998531 13578899999999999999999999988776666655554433222 23466789999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      ||+.+|.+||++.+++.|+||....+
T Consensus       256 ~l~~~P~~Rp~~~~~l~~~~~~~~~~  281 (313)
T cd06633         256 CLQKIPQERPASAELLRHDFVRRDRP  281 (313)
T ss_pred             HccCChhhCcCHHHHhcCcccCCCch
Confidence            99999999999999999999987543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.73  E-value=3.9e-17  Score=114.47  Aligned_cols=100  Identities=21%  Similarity=0.304  Sum_probs=72.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-------HHHHHHHHH----------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-------WVQALFKIA----------------   73 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~-------~~~~~~~i~----------------   73 (135)
                      ..+||+.|+|||++...  .++.++|+||+|+++|++++|..||....       ....+..+.                
T Consensus       242 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~  319 (391)
T PHA03212        242 GWAGTIATNAPELLARD--PYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQA  319 (391)
T ss_pred             cccCccCCCChhhhcCC--CCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhH
Confidence            35799999999999764  68999999999999999999988764321       111111110                


Q ss_pred             ----------cCCCC---CCC-----CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           74 ----------RGELP---PIP-----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        74 ----------~~~~~---~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                                .....   ..+     ...+.++.+++.+||..||.+||+++++++|+||...
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~  382 (391)
T PHA03212        320 NLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI  382 (391)
T ss_pred             HHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence                      00000   000     1235678899999999999999999999999999873

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.73  E-value=2.9e-17  Score=113.17  Aligned_cols=102  Identities=29%  Similarity=0.426  Sum_probs=77.9

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC---------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE---------------------   76 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~---------------------   76 (135)
                      ..|+..|+|||++... ..++.++|+||+|++++++++|+.||.+.+....+..+....                     
T Consensus       174 ~~~~~~y~aPE~~~~~-~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (342)
T cd07879         174 YVVTRWYRAPEVILNW-MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIK  252 (342)
T ss_pred             ceeeecccChhhhcCc-cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHh
Confidence            4678889999998763 257889999999999999999999998766444333222110                     


Q ss_pred             -CCC--------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           77 -LPP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        77 -~~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                       .+.        .....+..+.+++.+||+.+|.+||++++++.|+||....+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         253 SLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             hcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence             000        01235677899999999999999999999999999998654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.72  E-value=3e-17  Score=112.36  Aligned_cols=114  Identities=25%  Similarity=0.314  Sum_probs=87.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP------------------   78 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~------------------   78 (135)
                      ...++..|+|||++.+. ..++.++|+|++|++++++++|..||.+.+..+.+..+......                  
T Consensus       165 ~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  243 (330)
T cd07834         165 EYVVTRWYRAPELLLSS-SRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYL  243 (330)
T ss_pred             ccccccCcCCceeeecc-cCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHH
Confidence            34678889999999875 26788999999999999999999999876655444333221100                  


Q ss_pred             ------------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCCCCcccc
Q 032711           79 ------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHF  131 (135)
Q Consensus        79 ------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~~~~~~~  131 (135)
                                  ......+..+.+++.+||..+|.+||++++++.|+||......+.+.+.-..+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~~~~~~~~  308 (330)
T cd07834         244 KSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEPVAKPPF  308 (330)
T ss_pred             hhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccCCCCCCcc
Confidence                        01123567889999999999999999999999999999888877776665444

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.72  E-value=4.3e-17  Score=109.32  Aligned_cols=97  Identities=26%  Similarity=0.421  Sum_probs=71.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHcC-------------------CC
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWVQALFKIARG-------------------EL   77 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~-~~~~~~~~~i~~~-------------------~~   77 (135)
                      ..++..|+|||++.+. ..++.++|+||+|+++++|++|..|+.. .+..+.+..+.+.                   ..
T Consensus       159 ~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
T cd07839         159 EVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPY  237 (284)
T ss_pred             CccccCCcChHHHhCC-cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccccc
Confidence            4568899999998764 3578899999999999999998887543 3333332222110                   00


Q ss_pred             CC---------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           78 PP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        78 ~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      ..         ....++.++.+++.+||..+|.+||++++++.|+||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         238 PMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             CCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            00         112356788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=1.1e-17  Score=116.66  Aligned_cols=99  Identities=24%  Similarity=0.387  Sum_probs=78.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-CCCC--CcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIP--DSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-~~~~--~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++...  .++.++|+||+||++|+|++|..||...+..+.+..+..... ...+  ..++.++.+++.
T Consensus       207 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~  284 (377)
T cd05629         207 STVGTPDYIAPEIFLQQ--GYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIR  284 (377)
T ss_pred             ccCCCccccCHHHHccC--CCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHH
Confidence            35799999999999764  689999999999999999999999988776666655544221 1223  246789999999


Q ss_pred             HhcccCCCCC---CCHHHHhhCcCCCCC
Q 032711           94 KCLQVNPNDR---PTAAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~~~p~~R---ps~~~~l~~~~~~~~  118 (135)
                      +|+. +|.+|   +++.+++.||||...
T Consensus       285 ~lL~-~~~~r~~r~~~~~~l~hp~~~~~  311 (377)
T cd05629         285 RLIT-NAENRLGRGGAHEIKSHPFFRGV  311 (377)
T ss_pred             HHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            9997 66655   599999999999853

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.72  E-value=7.4e-18  Score=116.80  Aligned_cols=99  Identities=23%  Similarity=0.374  Sum_probs=79.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-CCCC--CcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIP--DSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-~~~~--~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+||++|+|++|..||.+.+.......+..... ...+  ...+.++.+++.
T Consensus       195 ~~~gt~~Y~APE~~~~~--~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~  272 (360)
T cd05627         195 STVGTPDYIAPEVFMQT--GYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLIL  272 (360)
T ss_pred             ccCCCccccCHHHHcCC--CCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHH
Confidence            46899999999999875  689999999999999999999999988877666666654321 1222  236789999999


Q ss_pred             HhcccCCCCCC---CHHHHhhCcCCCCC
Q 032711           94 KCLQVNPNDRP---TAAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~~~p~~Rp---s~~~~l~~~~~~~~  118 (135)
                      +++ .+|.+|+   ++++++.||||.+.
T Consensus       273 ~l~-~~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         273 RFC-TDSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             Hhc-cChhhcCCCCCHHHHhcCCCCCCC
Confidence            876 4999998   47899999999874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.72  E-value=6.9e-17  Score=106.58  Aligned_cols=96  Identities=32%  Similarity=0.619  Sum_probs=82.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      ..|+..|++||.+.+.  .++.++|+|++|++++++++|+.||...+..+....+........+...+.++.+++.+|+.
T Consensus       161 ~~~~~~~~~Pe~~~~~--~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (256)
T cd08530         161 QIGTPHYMAPEVWKGR--PYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQ  238 (256)
T ss_pred             ccCCccccCHHHHCCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcC
Confidence            4578899999999764  57889999999999999999999998877666666666666656667788999999999999


Q ss_pred             cCCCCCCCHHHHhhCcCC
Q 032711           98 VNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        98 ~~p~~Rps~~~~l~~~~~  115 (135)
                      .+|.+||++.++++||++
T Consensus       239 ~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         239 VKPKLRPNCDKILASPAV  256 (256)
T ss_pred             CCcccCCCHHHHhcCCCC
Confidence            999999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.72  E-value=3.2e-17  Score=109.35  Aligned_cols=97  Identities=28%  Similarity=0.441  Sum_probs=76.1

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHH----HHHHHHcCCCCCCCCcccHHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQ----ALFKIARGELPPIPDSVSRDARDFIL   93 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~li~   93 (135)
                      ..|+..|+|||++...  .++.++|+||+|++++++++|..||.......    ...... ......+...+..+.+++.
T Consensus       166 ~~~~~~y~aPE~~~~~--~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~  242 (267)
T PHA03390        166 YDGTLDYFSPEKIKGH--NYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNANDFVQ  242 (267)
T ss_pred             CCCCCcccChhhhcCC--CCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHHHHHHHH
Confidence            4688899999999764  57899999999999999999999997543321    121111 2222344568899999999


Q ss_pred             HhcccCCCCCCC-HHHHhhCcCCCC
Q 032711           94 KCLQVNPNDRPT-AAQLMEHPFVKR  117 (135)
Q Consensus        94 ~~l~~~p~~Rps-~~~~l~~~~~~~  117 (135)
                      +||+.+|.+|++ ++++++|+||.+
T Consensus       243 ~~l~~~p~~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        243 SMLKYNINYRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             HHhccChhhCCchHHHHhcCCcccC
Confidence            999999999996 699999999964

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.72  E-value=3.8e-17  Score=109.55  Aligned_cols=99  Identities=24%  Similarity=0.384  Sum_probs=74.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-------------------   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-------------------   77 (135)
                      ...|+..|+|||++... ..++.++|+|++|++++++++|.++|.+......+..+.....                   
T Consensus       159 ~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd07832         159 HQVATRWYRAPELLYGA-RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI  237 (286)
T ss_pred             cccCcccccCceeeecc-ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence            34688899999998654 3568899999999999999999888876654443333221100                   


Q ss_pred             --C--------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCC
Q 032711           78 --P--------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        78 --~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~  116 (135)
                        .        ......+..+.+++.+|+..+|.+||++++++.|+||.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence              0        00123467889999999999999999999999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.72  E-value=1.6e-17  Score=115.89  Aligned_cols=111  Identities=23%  Similarity=0.347  Sum_probs=88.8

Q ss_pred             hhhhhhhh--------hhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC
Q 032711            6 VEGLGNAL--------RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL   77 (135)
Q Consensus         6 ~~~~~~~~--------~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~   77 (135)
                      ++|||.+.        ..+..+-|.+|.|||.+++. ..|+..+|+||+||++.||+.|++.|.+.+..+++..|.+-..
T Consensus       259 iaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~-t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcG  337 (560)
T KOG0600|consen  259 IADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGA-TSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCG  337 (560)
T ss_pred             eccccceeeccCCCCcccccceEEeeccChHHhcCC-cccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhC
Confidence            55666555        23445779999999999997 4899999999999999999999999999998888777643211


Q ss_pred             C---------CCC-------------------CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           78 P---------PIP-------------------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        78 ~---------~~~-------------------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      .         .+|                   ..++..+.+|+..+|..||++|.++++++.++||..
T Consensus       338 SP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t  405 (560)
T KOG0600|consen  338 SPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT  405 (560)
T ss_pred             CCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence            0         011                   234677889999999999999999999999999943

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.72  E-value=1.9e-17  Score=111.77  Aligned_cols=103  Identities=35%  Similarity=0.603  Sum_probs=81.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li~~~   95 (135)
                      ..|++.|++||.+...  .++.++|+|++|++++++++|+.||...+.......+.....+  ..+..++..+.+++.+|
T Consensus       175 ~~~~~~y~~PE~~~~~--~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  252 (293)
T cd06647         175 MVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC  252 (293)
T ss_pred             ccCChhhcCchhhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHH
Confidence            4688889999998764  5788999999999999999999999876654443333222221  22345678899999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                      |..+|.+||++.+++.|+||....+.+
T Consensus       253 l~~~p~~Rp~~~~il~h~~~~~~~~~~  279 (293)
T cd06647         253 LEMDVEKRGSAKELLQHPFLKIAKPLS  279 (293)
T ss_pred             ccCChhhCcCHHHHhcCHHHhcCcccc
Confidence            999999999999999999999877544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.72  E-value=4.9e-17  Score=109.55  Aligned_cols=97  Identities=27%  Similarity=0.419  Sum_probs=75.0

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-------------------CC
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-------------------PP   79 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-------------------~~   79 (135)
                      .+++.|+|||++.+. ..++.++|+|++|+++++|++|..||.+.+.......+.....                   ..
T Consensus       172 ~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (295)
T cd07837         172 IVTLWYRAPEVLLGS-THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQ  250 (295)
T ss_pred             ccccCCCChHHhhCC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCc
Confidence            567789999998754 3578999999999999999999999987665544433321100                   00


Q ss_pred             --------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCC
Q 032711           80 --------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        80 --------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~  116 (135)
                              .....+.++.+++.+||..+|.+||++.+++.|+||.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         251 WKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             ccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence                    0123677899999999999999999999999999984

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.72  E-value=4.3e-17  Score=110.45  Aligned_cols=98  Identities=26%  Similarity=0.378  Sum_probs=73.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-------------------   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-------------------   77 (135)
                      ...|+..|+|||.+.+. ..++.++|+|++|+++++|++|++||.+.+.......+.....                   
T Consensus       185 ~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (311)
T cd07866         185 NLVVTRWYRPPELLLGE-RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGV  263 (311)
T ss_pred             cceeccCcCChHHhhCC-CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhccccccc
Confidence            34678889999998754 3578899999999999999999999987665443333221000                   


Q ss_pred             ---CCCC-------CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           78 ---PPIP-------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        78 ---~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                         ...+       ......+.+++.+||..+|.+||++.+++.|+||
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         264 HSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             ccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence               0000       1234678899999999999999999999999997

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.72  E-value=5.3e-17  Score=109.04  Aligned_cols=100  Identities=26%  Similarity=0.476  Sum_probs=77.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH-----------HHHHHHHHcCCCCCCCCc-c
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-----------VQALFKIARGELPPIPDS-V   84 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~-----------~~~~~~i~~~~~~~~~~~-~   84 (135)
                      ..+|+..|+|||++...  .++.++|+|++|++++++++|..||.....           .+....+........+.. .
T Consensus       161 ~~~~~~~~~aPE~~~~~--~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd06620         161 TFVGTSTYMSPERIQGG--KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDF  238 (284)
T ss_pred             ccccCcccCCHHHHccC--CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhc
Confidence            35789999999998764  678899999999999999999999975432           122333333333233333 6


Q ss_pred             cHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           85 SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        85 ~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      +..+.+++.+|+..+|.+||++.++++|+||...
T Consensus       239 ~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         239 PEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             CHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            7889999999999999999999999999988653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.72  E-value=4.2e-17  Score=114.27  Aligned_cols=104  Identities=22%  Similarity=0.322  Sum_probs=76.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH---HHHHHHHHcC----C-------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---VQALFKIARG----E-------------   76 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~---~~~~~~i~~~----~-------------   76 (135)
                      ..+||+.|+|||++...  .++.++|+|++|+++|+|++|+.||.+...   ...+..+...    .             
T Consensus       246 ~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~  323 (392)
T PHA03207        246 GWSGTLETNSPELLALD--PYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK  323 (392)
T ss_pred             ccccccCccCHhHhcCC--CCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence            45799999999999764  689999999999999999999999965431   1111111110    0             


Q ss_pred             ---------CC--CC-----CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           77 ---------LP--PI-----PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        77 ---------~~--~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                               .+  ..     ...++.++.+++.+||..+|.+||++.+++.||||....+..
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~~  385 (392)
T PHA03207        324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPINL  385 (392)
T ss_pred             HHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccchhh
Confidence                     00  00     123456788999999999999999999999999998754433

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.72  E-value=9.5e-17  Score=110.62  Aligned_cols=104  Identities=25%  Similarity=0.344  Sum_probs=79.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC-------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-------------------   78 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~-------------------   78 (135)
                      ..++..|+|||.+... ..++.++|+||+|++++++++|..||.+.+....+..+......                   
T Consensus       175 ~~~~~~y~aPE~~~~~-~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  253 (343)
T cd07851         175 YVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQ  253 (343)
T ss_pred             CcccccccCHHHHhCC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHH
Confidence            4678899999998753 25788999999999999999999999876655444433221100                   


Q ss_pred             -----------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           79 -----------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        79 -----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                                 ......+..+.+++.+||..+|.+||++.+++.||||.......
T Consensus       254 ~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~  308 (343)
T cd07851         254 SLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPE  308 (343)
T ss_pred             hccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCc
Confidence                       00123477899999999999999999999999999998765543

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.72  E-value=6.2e-17  Score=110.01  Aligned_cols=107  Identities=34%  Similarity=0.545  Sum_probs=84.3

Q ss_pred             cccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC-CCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP-IPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~li~~   94 (135)
                      ...|+..|+|||.+... ...++.++|+||+|++++++++|..||...+.......+.....+. .....+..+.+++.+
T Consensus       170 ~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  249 (308)
T cd06634         170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDS  249 (308)
T ss_pred             cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHH
Confidence            34688899999998631 1357889999999999999999999998776555555554443322 234677889999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPLPTSW  123 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~~~~~  123 (135)
                      ||..+|.+||++++++.|+|+....+...
T Consensus       250 cl~~~P~~Rp~~~~ll~~~~~~~~~~~~~  278 (308)
T cd06634         250 CLQKIPQDRPTSEVLLKHRFVLRERPPTV  278 (308)
T ss_pred             HhhCCcccCCCHHHHhhCccccccCChhH
Confidence            99999999999999999999998655443

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.72  E-value=8.1e-19  Score=118.69  Aligned_cols=113  Identities=27%  Similarity=0.453  Sum_probs=83.1

Q ss_pred             hhhhhhhhhh----hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc--CCCCC
Q 032711            6 VEGLGNALRR----KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR--GELPP   79 (135)
Q Consensus         6 ~~~~~~~~~~----~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~--~~~~~   79 (135)
                      +.++|+++..    .+++.|..|.|||++++-  +++..+||||+||+|+|+.+|...|.+-+..+.+..+.+  ++.+.
T Consensus       253 vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgL--GwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~  330 (415)
T KOG0671|consen  253 VIDFGSATFDHEHHSTIVSTRHYRAPEVILGL--GWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPS  330 (415)
T ss_pred             EEecCCcceeccCcceeeeccccCCchheecc--CcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcH
Confidence            3455554433    346899999999999985  799999999999999999999999977654443332211  11100


Q ss_pred             -------------------------------------------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCC
Q 032711           80 -------------------------------------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        80 -------------------------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~  116 (135)
                                                                 ..+....++.+|+.++|.+||.+|+++.+++.||||+
T Consensus       331 ~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~  410 (415)
T KOG0671|consen  331 RMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFA  410 (415)
T ss_pred             HHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhh
Confidence                                                       0011123578999999999999999999999999998


Q ss_pred             CCCC
Q 032711          117 RPLP  120 (135)
Q Consensus       117 ~~~~  120 (135)
                      ...+
T Consensus       411 ~~~~  414 (415)
T KOG0671|consen  411 RLTP  414 (415)
T ss_pred             cCCC
Confidence            7654

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.72  E-value=2.6e-17  Score=110.69  Aligned_cols=100  Identities=22%  Similarity=0.381  Sum_probs=79.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH---cCCCCCCCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA---RGELPPIPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~---~~~~~~~~~~~~~~~~~li~   93 (135)
                      ...|+..|+|||++.+.  .++.++|+||+|++++++++|..||.+.........+.   .......+...+..+.+++.
T Consensus       160 ~~~g~~~~~aPE~~~~~--~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  237 (285)
T cd05632         160 GRVGTVGYMAPEVLNNQ--RYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICK  237 (285)
T ss_pred             CCCCCcCccChHHhcCC--CCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHH
Confidence            45789999999999764  68899999999999999999999998765543322221   11122345567888999999


Q ss_pred             HhcccCCCCCCC-----HHHHhhCcCCCCC
Q 032711           94 KCLQVNPNDRPT-----AAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~~~p~~Rps-----~~~~l~~~~~~~~  118 (135)
                      +|+..+|.+|++     +.+++.|+||+..
T Consensus       238 ~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         238 MLLTKDPKQRLGCQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             HHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence            999999999999     8899999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.72  E-value=4.6e-17  Score=110.50  Aligned_cols=104  Identities=33%  Similarity=0.585  Sum_probs=82.7

Q ss_pred             cccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC-CCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI-PDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~li~~   94 (135)
                      ...|+..|+|||++... ...++.++|+|++|+++|++++|..||.+.+.......+........ +...+..+.+++.+
T Consensus       170 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  249 (307)
T cd06607         170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDS  249 (307)
T ss_pred             CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHH
Confidence            35678899999988531 23578899999999999999999999988776665555544333222 33467889999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      ||..+|.+||++.+++.|+|+....+
T Consensus       250 ~l~~~p~~Rp~~~~il~~~~~~~~~~  275 (307)
T cd06607         250 CLQKIPQDRPSSEELLKHRFVLRERP  275 (307)
T ss_pred             HhcCChhhCcCHHHHhcChhhcccCC
Confidence            99999999999999999999987553

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.72  E-value=8e-17  Score=108.80  Aligned_cols=103  Identities=31%  Similarity=0.486  Sum_probs=82.2

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li~~~   95 (135)
                      ..|+..|++||.+...  .++.++|+|++|++++++++|..||.+....+....+......  ......+..+.+++.+|
T Consensus       176 ~~~~~~y~~pE~~~~~--~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  253 (292)
T cd06657         176 LVGTPYWMAPELISRL--PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRL  253 (292)
T ss_pred             cccCccccCHHHhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHH
Confidence            4688899999988753  5788999999999999999999999876655544443322211  12335678899999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                      |..+|.+||++++++.|+||....+++
T Consensus       254 l~~~P~~R~~~~~ll~~~~~~~~~~~~  280 (292)
T cd06657         254 LVRDPAQRATAAELLKHPFLAKAGPPS  280 (292)
T ss_pred             HhCCcccCcCHHHHhcChHHhccCCCc
Confidence            999999999999999999999877654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.72  E-value=4e-17  Score=109.65  Aligned_cols=101  Identities=37%  Similarity=0.703  Sum_probs=81.3

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC--CCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~li~~~   95 (135)
                      ..|+..|++||.+.+.  .++.++|+|++|++++++++|..||...+.......+........  +..++..+.+++.+|
T Consensus       176 ~~~~~~y~~PE~~~~~--~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  253 (286)
T cd06614         176 VVGTPYWMAPEVIKRK--DYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKC  253 (286)
T ss_pred             ccCCcccCCHhHhcCC--CCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHH
Confidence            4578899999998764  578999999999999999999999987766555544443333222  223678899999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      +..+|..||++.+++.|+|+.....
T Consensus       254 l~~~p~~Rpt~~~il~~~~~~~~~~  278 (286)
T cd06614         254 LVKDPEKRPSAEELLQHPFLKKACP  278 (286)
T ss_pred             hccChhhCcCHHHHhhChHhhccCc
Confidence            9999999999999999999998443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.72  E-value=7e-17  Score=108.00  Aligned_cols=91  Identities=20%  Similarity=0.445  Sum_probs=77.7

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .+++.|+|||++...  .++.++|+||+|++++++++ |..||.+.+..+....+..+.....+...+..+.+++.+||.
T Consensus       185 ~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  262 (280)
T cd05049         185 MLPIRWMPPESIMYR--KFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWK  262 (280)
T ss_pred             cccceecChhhhccC--CcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcC
Confidence            456789999999764  68999999999999999998 999998877776666666666555566788999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++++
T Consensus       263 ~~p~~Rp~~~eil~  276 (280)
T cd05049         263 RDPQQRINIKDIHE  276 (280)
T ss_pred             CCcccCCCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.72  E-value=7e-17  Score=106.99  Aligned_cols=90  Identities=20%  Similarity=0.317  Sum_probs=76.8

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|+|||.+...  .++.++|+||+|++++++++ |..||...+..+....+..+...+.+...+.++.+++.+||..
T Consensus       160 ~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~  237 (257)
T cd05116         160 WPVKWYAPECMNYY--KFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTY  237 (257)
T ss_pred             CCccccCHhHhccC--CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhcc
Confidence            35789999998653  67889999999999999997 9999988777777777776655566778899999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032711           99 NPNDRPTAAQLME  111 (135)
Q Consensus        99 ~p~~Rps~~~~l~  111 (135)
                      +|.+||++.++..
T Consensus       238 ~p~~Rp~~~~i~~  250 (257)
T cd05116         238 GVDERPGFAVVEL  250 (257)
T ss_pred             CchhCcCHHHHHH
Confidence            9999999998754

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.72  E-value=9.6e-17  Score=106.40  Aligned_cols=98  Identities=42%  Similarity=0.816  Sum_probs=76.9

Q ss_pred             ccccccccchhhhhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHcCCCCCCCCc--ccHHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WVQALFKIARGELPPIPDS--VSRDARDFIL   93 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~-~~~~~~~dvws~G~~l~~l~~g~~p~~~~~-~~~~~~~i~~~~~~~~~~~--~~~~~~~li~   93 (135)
                      ..|+..|++||++.... ..++.++|+|++|++++++++|..||.... .......+.....+..+..  .+..+.+++.
T Consensus       163 ~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  242 (264)
T cd06626         163 LAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLD  242 (264)
T ss_pred             CcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHH
Confidence            46788999999987642 237889999999999999999999997653 3333344444333344443  3788999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      +|++.+|.+||++++++.|+|+
T Consensus       243 ~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         243 RCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHccCCcccCCCHHHHhcCCCC
Confidence            9999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.71  E-value=7.5e-17  Score=109.63  Aligned_cols=102  Identities=31%  Similarity=0.513  Sum_probs=75.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--------------------   77 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--------------------   77 (135)
                      ..++..|+|||++......++.++|+||+|++++++++|+.||..............+..                    
T Consensus       168 ~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (314)
T cd08216         168 SVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSR  247 (314)
T ss_pred             ccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCccc
Confidence            457778999999976433578899999999999999999999987654332221111100                    


Q ss_pred             -------------CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           78 -------------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        78 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                                   ......++.++.+++.+||..+|++||++.+++.||||+...
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~  302 (314)
T cd08216         248 SSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK  302 (314)
T ss_pred             ccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence                         000112345788999999999999999999999999998654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.71  E-value=8.4e-17  Score=107.28  Aligned_cols=98  Identities=40%  Similarity=0.762  Sum_probs=76.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC-CCCCC----CcccHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE-LPPIP----DSVSRDARDFI   92 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~-~~~~~----~~~~~~~~~li   92 (135)
                      ..|+..|+|||++......++.++|+|++|++++++++|..||...........+.... ....+    ..++..+.+++
T Consensus       170 ~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  249 (272)
T cd06629         170 MQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFL  249 (272)
T ss_pred             ccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHH
Confidence            46788999999987642247889999999999999999999997665544444332221 11222    24578999999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcCC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      .+|+..+|..||++.+++.|||+
T Consensus       250 ~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         250 NACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             HHHhcCChhhCCCHHHHhhCCCC
Confidence            99999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.71  E-value=5.1e-17  Score=109.04  Aligned_cols=99  Identities=31%  Similarity=0.523  Sum_probs=76.8

Q ss_pred             cccccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARDF   91 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~l   91 (135)
                      ...|+..|+|||++...   ...++.++|+||+|++++++++|+.||...........+......  ..+...+..+.++
T Consensus       183 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  262 (286)
T cd06638         183 TSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDF  262 (286)
T ss_pred             cccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHH
Confidence            34688999999988532   134788999999999999999999999876654444433322211  1234457789999


Q ss_pred             HHHhcccCCCCCCCHHHHhhCcCC
Q 032711           92 ILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      +.+||+.+|++||++.+++.|+||
T Consensus       263 i~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         263 IRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             HHHHccCCcccCCCHHHHhhcccC
Confidence            999999999999999999999996

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.71  E-value=8.6e-17  Score=106.94  Aligned_cols=97  Identities=40%  Similarity=0.664  Sum_probs=77.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC-CCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE-LPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~li~~~   95 (135)
                      ...|+..|+|||++.+.  .++.++|+|++|++++++++|+.||...........+.... .+..+...+..+.+++.+|
T Consensus       168 ~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  245 (265)
T cd06652         168 SVTGTPYWMSPEVISGE--GYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRI  245 (265)
T ss_pred             cCCCCccccChhhhcCC--CCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHH
Confidence            35688899999999764  57899999999999999999999998766554444443322 2334556778889999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~  116 (135)
                      +. +|.+||+++++++|+|++
T Consensus       246 l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         246 FV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             hc-ChhhCCCHHHHhcCcccC
Confidence            85 899999999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.71  E-value=8.4e-17  Score=105.60  Aligned_cols=96  Identities=42%  Similarity=0.664  Sum_probs=77.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCc--ccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDS--VSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~li~~   94 (135)
                      ...|+..|++||.+...  .++.++|+|++|++++++++|..||...+................+..  ++..+.+++.+
T Consensus       156 ~~~~~~~~~~PE~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  233 (253)
T cd05122         156 TMVGTPYWMAPEVINGK--PYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKK  233 (253)
T ss_pred             ceecCCcccCHHHHcCC--CCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHH
Confidence            45678899999999764  478899999999999999999999987755444444443333333333  37889999999


Q ss_pred             hcccCCCCCCCHHHHhhCcC
Q 032711           95 CLQVNPNDRPTAAQLMEHPF  114 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~  114 (135)
                      |+..+|.+||++.+++.|||
T Consensus       234 ~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         234 CLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             HccCChhhCCCHHHHhcCCC
Confidence            99999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.71  E-value=6.7e-18  Score=115.69  Aligned_cols=100  Identities=24%  Similarity=0.336  Sum_probs=80.4

Q ss_pred             ccccccccchhhhhcc----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-CCC--CCcccHHHHH
Q 032711           18 HVSRWNSLTDQVVNSK----NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPI--PDSVSRDARD   90 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~----~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-~~~--~~~~~~~~~~   90 (135)
                      ..||+.|+|||++...    ...++.++||||+|+++|+|++|..||........+..+..... ...  ....+..+.+
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  242 (330)
T cd05601         163 PVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLD  242 (330)
T ss_pred             ccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHH
Confidence            4789999999998732    13578899999999999999999999988776666665544321 122  2356889999


Q ss_pred             HHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           91 FILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        91 li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      ++.+|+. +|.+|+++.+++.||||...
T Consensus       243 li~~ll~-~p~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         243 LIQSLLC-GQKERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             HHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence            9999998 99999999999999999864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=6.1e-17  Score=107.33  Aligned_cols=100  Identities=23%  Similarity=0.356  Sum_probs=80.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC---CCCCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~li~   93 (135)
                      ...|+..|++||.+.+.  .++.++|+|++|++++++++|..||...+.......+.....   ......++..+.+++.
T Consensus       152 ~~~~~~~y~~pe~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  229 (260)
T cd05611         152 KFVGTPDYLAPETILGV--GDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLIN  229 (260)
T ss_pred             cCCCCcCccChhhhcCC--CCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHH
Confidence            45788899999999875  478999999999999999999999987766555544443322   1223357899999999


Q ss_pred             HhcccCCCCCCC---HHHHhhCcCCCCC
Q 032711           94 KCLQVNPNDRPT---AAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~~~p~~Rps---~~~~l~~~~~~~~  118 (135)
                      +||..+|++||+   +++++.||||...
T Consensus       230 ~~l~~~p~~R~~~~~~~~~l~~~~~~~~  257 (260)
T cd05611         230 RLLCMDPAKRLGANGYQEIKSHPFFKSI  257 (260)
T ss_pred             HHccCCHHHccCCCcHHHHHcChHhhcC
Confidence            999999999995   5799999999764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.71  E-value=3.8e-17  Score=111.89  Aligned_cols=101  Identities=29%  Similarity=0.456  Sum_probs=75.5

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC---------------------
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP---------------------   78 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~---------------------   78 (135)
                      ++..|++||++.+....++.++|+|++|++++++++|+.||..................                     
T Consensus       170 ~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (328)
T cd08226         170 SVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSG  249 (328)
T ss_pred             CccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhh
Confidence            45679999999764335789999999999999999999999776544333222211100                     


Q ss_pred             -------------------------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           79 -------------------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        79 -------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                                               +....++..+.+++.+||..||.+||++.++++|+||.....
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~  316 (328)
T cd08226         250 VDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE  316 (328)
T ss_pred             hhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence                                     011224567899999999999999999999999999986544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.71  E-value=5.3e-17  Score=115.73  Aligned_cols=99  Identities=21%  Similarity=0.427  Sum_probs=71.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-------HHHHHHHHHcC-C-----CCC----
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-------WVQALFKIARG-E-----LPP----   79 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~-------~~~~~~~i~~~-~-----~~~----   79 (135)
                      ..+||..|+|||++.+.  .++.++||||+|+++|+++.|..++....       ....+..+... .     .+.    
T Consensus       321 ~~~GT~~Y~APE~~~~~--~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~  398 (461)
T PHA03211        321 GIAGTVDTNAPEVLAGD--PYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGS  398 (461)
T ss_pred             ccCCCcCCcCHHHHcCC--CCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcch
Confidence            35799999999999774  68999999999999999998776543211       11122222111 0     000    


Q ss_pred             -------------------CC-----CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           80 -------------------IP-----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        80 -------------------~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                                         .+     ..+...+.+|+.+||..||.+||++.+++.|+||..
T Consensus       399 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        399 RLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             HHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence                               00     123457889999999999999999999999999975

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.71  E-value=8.9e-17  Score=107.30  Aligned_cols=96  Identities=31%  Similarity=0.534  Sum_probs=80.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...|+..|++||+....  .++.++|+|++|++++++++|..||........+..+.... ...+...+..+.+++.+||
T Consensus       181 ~~~~~~~~~~Pe~~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l  257 (280)
T cd05581         181 SFVGTAEYVSPELLNEK--PAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLE-YSFPPNFPPDAKDLIEKLL  257 (280)
T ss_pred             cccCCccccCHHHhCCC--CCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcC-CCCCCccCHHHHHHHHHHh
Confidence            45678899999998764  57889999999999999999999998877655554444322 2456677899999999999


Q ss_pred             ccCCCCCCCH----HHHhhCcCC
Q 032711           97 QVNPNDRPTA----AQLMEHPFV  115 (135)
Q Consensus        97 ~~~p~~Rps~----~~~l~~~~~  115 (135)
                      ..+|.+||++    +++++|+||
T Consensus       258 ~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         258 VLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             cCCHhhCCCcccCHHHHhcCCCC
Confidence            9999999999    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.71  E-value=5.4e-17  Score=107.29  Aligned_cols=93  Identities=26%  Similarity=0.559  Sum_probs=80.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      ..|+..|+|||++...  .++.++|+|++|+++++|++|..||...+.......+..+...+.+..++..+.+++.+||.
T Consensus       160 ~~~~~~~~aPE~~~~~--~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  237 (255)
T cd08219         160 YVGTPYYVPPEIWENM--PYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQMFK  237 (255)
T ss_pred             ccCCccccCHHHHccC--CcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHHh
Confidence            5688899999999764  58899999999999999999999998887777776776666666677788899999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032711           98 VNPNDRPTAAQLMEH  112 (135)
Q Consensus        98 ~~p~~Rps~~~~l~~  112 (135)
                      .+|.+||++.+++.-
T Consensus       238 ~~P~~Rp~~~~il~~  252 (255)
T cd08219         238 RNPRSRPSATTILSR  252 (255)
T ss_pred             CCcccCCCHHHHhhc
Confidence            999999999999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.71  E-value=6.2e-17  Score=108.62  Aligned_cols=101  Identities=22%  Similarity=0.326  Sum_probs=78.6

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--VQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ..|+..|+|||.+... ..++.++|+||+|++++++++|..||.....  ...............+...+.++.+++.+|
T Consensus       155 ~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  233 (279)
T cd05633         155 SVGTHGYMAPEVLQKG-TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGL  233 (279)
T ss_pred             cCCCcCccCHHHhcCC-CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHH
Confidence            4689999999998643 3578899999999999999999999965322  222222222222345667889999999999


Q ss_pred             cccCCCCCC-----CHHHHhhCcCCCCCC
Q 032711           96 LQVNPNDRP-----TAAQLMEHPFVKRPL  119 (135)
Q Consensus        96 l~~~p~~Rp-----s~~~~l~~~~~~~~~  119 (135)
                      |..+|.+|+     ++.++++|+||++..
T Consensus       234 l~~~p~~R~~~~~~~~~~~~~h~~~~~~~  262 (279)
T cd05633         234 LQRDVSKRLGCLGRGAQEVKEHVFFKGID  262 (279)
T ss_pred             hcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence            999999999     599999999999844

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=1.1e-16  Score=105.49  Aligned_cols=96  Identities=40%  Similarity=0.835  Sum_probs=82.1

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      ..|+..|++||.....  .++.++|+|++|++++++++|..||...+.......+........+...+..+.+++.+||.
T Consensus       159 ~~~~~~y~~pe~~~~~--~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  236 (254)
T cd06627         159 VVGTPYWMAPEVIEMS--GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQ  236 (254)
T ss_pred             cccchhhcCHhhhcCC--CCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHh
Confidence            4678899999998764  47889999999999999999999998777666665555555556667788999999999999


Q ss_pred             cCCCCCCCHHHHhhCcCC
Q 032711           98 VNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        98 ~~p~~Rps~~~~l~~~~~  115 (135)
                      .+|++||++.+++.|+||
T Consensus       237 ~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         237 KDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             CChhhCcCHHHHhcCCCC
Confidence            999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.71  E-value=2.8e-17  Score=110.64  Aligned_cols=122  Identities=25%  Similarity=0.341  Sum_probs=94.5

Q ss_pred             hhhhhhhhhhhh------cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-
Q 032711            5 TVEGLGNALRRK------WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-   77 (135)
Q Consensus         5 ~~~~~~~~~~~~------~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-   77 (135)
                      +++|+|.+...-      +..-|..|.|||.+.+. ..|+.+.||||.|||+.||+.|++-|.+.+..+++..|.+--. 
T Consensus       166 KicDFGSAK~L~~~epniSYicSRyYRaPELifga-~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~  244 (364)
T KOG0658|consen  166 KICDFGSAKVLVKGEPNISYICSRYYRAPELIFGA-TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGT  244 (364)
T ss_pred             EeccCCcceeeccCCCceeEEEeccccCHHHHcCc-cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCC
Confidence            366676655432      22346789999999987 4799999999999999999999999999887777665543110 


Q ss_pred             ------------------CC---------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCCCC
Q 032711           78 ------------------PP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPT  127 (135)
Q Consensus        78 ------------------~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~~~  127 (135)
                                        +.         .....+++..+|+.+++.++|.+|.++.+++.|+||.........+|.
T Consensus       245 Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~~~~l~~  321 (364)
T KOG0658|consen  245 PTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDPNTKLPN  321 (364)
T ss_pred             CCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCcCccCcC
Confidence                              00         123467899999999999999999999999999999987766555444

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.71  E-value=8.5e-17  Score=107.00  Aligned_cols=97  Identities=31%  Similarity=0.581  Sum_probs=73.7

Q ss_pred             ccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC--C--CCcccHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP--I--PDSVSRDARDFI   92 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~--~--~~~~~~~~~~li   92 (135)
                      ..|+..|+|||++... ...++.++|+||+|++++++++|..||..................+  .  ...++..+.+++
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  245 (267)
T cd06645         166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFV  245 (267)
T ss_pred             ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHH
Confidence            4789999999997521 2357889999999999999999999987655443333332222211  1  124567899999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPF  114 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~  114 (135)
                      .+|+..+|++||++++++.|||
T Consensus       246 ~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         246 KMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             HHHccCCchhCcCHHHHhcCCC
Confidence            9999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.71  E-value=9.1e-17  Score=108.22  Aligned_cols=100  Identities=30%  Similarity=0.451  Sum_probs=82.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...|++.|+|||.+...  ..+.++|+|++|++++++++|..||...+.......+..+. ...+...+..+.+++.+||
T Consensus       157 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l  233 (290)
T cd05580         157 TLCGTPEYLAPEIILSK--GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGK-VRFPSFFSPDAKDLIRNLL  233 (290)
T ss_pred             CCCCCccccChhhhcCC--CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-ccCCccCCHHHHHHHHHHc
Confidence            45788999999998764  57888999999999999999999998777555555554443 3456677899999999999


Q ss_pred             ccCCCCCC-----CHHHHhhCcCCCCCC
Q 032711           97 QVNPNDRP-----TAAQLMEHPFVKRPL  119 (135)
Q Consensus        97 ~~~p~~Rp-----s~~~~l~~~~~~~~~  119 (135)
                      ..+|.+|+     ++.+++.||||....
T Consensus       234 ~~~p~~R~~~~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         234 QVDLTKRLGNLKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             cCCHHHccCcccCCHHHHHcCcccccCC
Confidence            99999999     899999999998644

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.71  E-value=5.7e-17  Score=108.73  Aligned_cols=97  Identities=32%  Similarity=0.543  Sum_probs=73.9

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC--------------------C-
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG--------------------E-   76 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~--------------------~-   76 (135)
                      ..|+..|+|||++.+. ..++.++|+||+|++++++++|.++|......+....+...                    . 
T Consensus       160 ~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T cd07846         160 YVATRWYRAPELLVGD-TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR  238 (286)
T ss_pred             ccceeeccCcHHhccc-cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence            4678899999998764 35788999999999999999999998765544333222210                    0 


Q ss_pred             CC---------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           77 LP---------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        77 ~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      .+         .....++..+.+++.+||..+|++||++.++++|+||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            00         0112456789999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.71  E-value=8.4e-17  Score=107.85  Aligned_cols=103  Identities=25%  Similarity=0.489  Sum_probs=78.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH-------HHHHHHHHcCCCCCC-CCcccHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-------VQALFKIARGELPPI-PDSVSRDA   88 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~-------~~~~~~i~~~~~~~~-~~~~~~~~   88 (135)
                      ..+|+..|+|||++.+.  .++.++|+|++|++++++++|+.||.....       ......+........ ....+.++
T Consensus       152 ~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (279)
T cd06619         152 TYVGTNAYMAPERISGE--QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKF  229 (279)
T ss_pred             CCCCChhhcCceeecCC--CCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHH
Confidence            45789999999999864  588999999999999999999999854221       111222222222222 23467889


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           89 RDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        89 ~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      .+++.+|+..+|.+||+++++++|+|+......
T Consensus       230 ~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~  262 (279)
T cd06619         230 VHFITQCMRKQPKERPAPENLMDHPFIVQYNDG  262 (279)
T ss_pred             HHHHHHHhhCChhhCCCHHHHhcCcccccccCc
Confidence            999999999999999999999999999876443

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=2.7e-17  Score=110.85  Aligned_cols=110  Identities=23%  Similarity=0.411  Sum_probs=91.8

Q ss_pred             hhhhhhhhhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCC-------CCcHHHHHHHHHcCCCCC
Q 032711            7 EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-------GVEWVQALFKIARGELPP   79 (135)
Q Consensus         7 ~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~-------~~~~~~~~~~i~~~~~~~   79 (135)
                      ++++.--.+.++|||+.|+|||.+.+.  .|+..+|.|++|++++||+.|+.||.       ..+..+.+++++......
T Consensus       400 e~l~~gd~tstfcgtpnyiapeilrge--eygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir  477 (593)
T KOG0695|consen  400 EGLGPGDTTSTFCGTPNYIAPEILRGE--EYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR  477 (593)
T ss_pred             cCCCCCcccccccCCCcccchhhhccc--ccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc
Confidence            445444556689999999999999986  69999999999999999999999994       234456677777776668


Q ss_pred             CCCcccHHHHHHHHHhcccCCCCCCC------HHHHhhCcCCCCC
Q 032711           80 IPDSVSRDARDFILKCLQVNPNDRPT------AAQLMEHPFVKRP  118 (135)
Q Consensus        80 ~~~~~~~~~~~li~~~l~~~p~~Rps------~~~~l~~~~~~~~  118 (135)
                      +|.+++..+..++...|+.||.+|..      +.++..|+||+..
T Consensus       478 iprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~i  522 (593)
T KOG0695|consen  478 IPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI  522 (593)
T ss_pred             ccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence            89999999999999999999999963      6789999999853

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.70  E-value=1.2e-16  Score=108.46  Aligned_cols=98  Identities=27%  Similarity=0.512  Sum_probs=79.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--CCCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--PPIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~li~~~   95 (135)
                      ..|+..|+|||.+...  .++.++|+||+|++++++++|..||.+....+....+.....  +......+..+.+++.+|
T Consensus       176 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  253 (305)
T cd05609         176 VCGTPEYIAPEVILRQ--GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRL  253 (305)
T ss_pred             CccCccccCchhccCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHH
Confidence            4678899999998764  578999999999999999999999988776665555544432  222235788899999999


Q ss_pred             cccCCCCCCC---HHHHhhCcCCCC
Q 032711           96 LQVNPNDRPT---AAQLMEHPFVKR  117 (135)
Q Consensus        96 l~~~p~~Rps---~~~~l~~~~~~~  117 (135)
                      |..+|.+||+   +.+++.|+||..
T Consensus       254 l~~~P~~R~~~~~~~~ll~~~~~~~  278 (305)
T cd05609         254 LRQNPLERLGTGGAFEVKQHRFFLG  278 (305)
T ss_pred             hccChhhccCccCHHHHHhCccccC
Confidence            9999999997   688999999965

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.70  E-value=1.6e-16  Score=108.39  Aligned_cols=107  Identities=34%  Similarity=0.551  Sum_probs=85.8

Q ss_pred             cccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC-CCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP-IPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~li~~   94 (135)
                      ...|+..|+|||.+... ...++.++|+|++|++++++++|..||...+.......+....... .....+..+.+++.+
T Consensus       180 ~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  259 (317)
T cd06635         180 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDS  259 (317)
T ss_pred             cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHH
Confidence            34688899999998531 2357889999999999999999999998877666666655544322 234567889999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPLPTSW  123 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~~~~~  123 (135)
                      ||+.+|.+||++.+++.|+|+....+...
T Consensus       260 ~l~~~p~~Rpt~~~il~~~~~~~~~~~~~  288 (317)
T cd06635         260 CLQKIPQDRPTSEELLKHMFVLRERPETV  288 (317)
T ss_pred             HccCCcccCcCHHHHHhChhhhccCcccc
Confidence            99999999999999999999987766554

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.70  E-value=1.4e-16  Score=104.95  Aligned_cols=97  Identities=42%  Similarity=0.774  Sum_probs=79.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHc-CCCCCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WVQALFKIAR-GELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~-~~~~~~~i~~-~~~~~~~~~~~~~~~~li~~   94 (135)
                      ...++..|++||.....  ..+.++|+|++|++++++++|..||.... .......+.. ......+...+..+.+++.+
T Consensus       162 ~~~~~~~y~~pE~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~  239 (260)
T cd06606         162 SVRGTPYWMAPEVIRGE--EYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRK  239 (260)
T ss_pred             CCCCCccccCHhhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHH
Confidence            35678899999999774  47899999999999999999999997765 3333444332 23345566778999999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      |+..+|.+||++.+++.||||
T Consensus       240 ~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         240 CLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             hCcCChhhCCCHHHHhhCCCC
Confidence            999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.70  E-value=7.2e-17  Score=107.28  Aligned_cols=97  Identities=34%  Similarity=0.718  Sum_probs=76.6

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH---HHHHHHHc-CCCCCCCCcccHHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV---QALFKIAR-GELPPIPDSVSRDARDFIL   93 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~---~~~~~i~~-~~~~~~~~~~~~~~~~li~   93 (135)
                      ..|+..|+|||++...  .++.++|+|++|++++++++|..||......   .....+.. ......+...+.++.+++.
T Consensus       168 ~~~~~~~~~PE~~~~~--~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  245 (268)
T cd06630         168 LLGTIAFMAPEVLRGE--QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTL  245 (268)
T ss_pred             cccccceeCHhHhccC--CCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHH
Confidence            4678899999998764  5788999999999999999999998654322   22222222 2223455667889999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~  116 (135)
                      +|+..+|.+||++.+++.||||.
T Consensus       246 ~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         246 RCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHcCCCcccCcCHHHHhcCcccC
Confidence            99999999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.70  E-value=1.1e-16  Score=107.37  Aligned_cols=103  Identities=23%  Similarity=0.335  Sum_probs=80.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--VQALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ...|+..|+|||++... ..++.++|+|++|++++++++|..||.+...  ...............+...+.++.+++.+
T Consensus       154 ~~~~~~~y~aPE~~~~~-~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~  232 (278)
T cd05606         154 ASVGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG  232 (278)
T ss_pred             CcCCCcCCcCcHHhcCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHH
Confidence            35789999999999753 2578899999999999999999999976522  11222222222234556678999999999


Q ss_pred             hcccCCCCCC-----CHHHHhhCcCCCCCCC
Q 032711           95 CLQVNPNDRP-----TAAQLMEHPFVKRPLP  120 (135)
Q Consensus        95 ~l~~~p~~Rp-----s~~~~l~~~~~~~~~~  120 (135)
                      |+..+|.+|+     ++.++++|+||+....
T Consensus       233 ~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~  263 (278)
T cd05606         233 LLQRDVNRRLGCLGRGAQEVKEHPFFRSLDW  263 (278)
T ss_pred             HhhcCHHhccCCCCCCHHHHHhCccccCCCc
Confidence            9999999999     9999999999988654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.70  E-value=1.4e-16  Score=107.24  Aligned_cols=91  Identities=18%  Similarity=0.407  Sum_probs=76.8

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||++...  .++.++|+||+|+++++|++ |..||......+....+..+.....+...+..+.+++.+||+
T Consensus       183 ~~~~~y~aPE~~~~~--~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~  260 (288)
T cd05093         183 MLPIRWMPPESIMYR--KFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQ  260 (288)
T ss_pred             CccccccCHHHhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcc
Confidence            456789999999764  68899999999999999998 899998877766666776666555566788899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.+++.
T Consensus       261 ~~p~~Rpt~~~v~~  274 (288)
T cd05093         261 REPHMRLNIKEIHS  274 (288)
T ss_pred             CChhhCCCHHHHHH
Confidence            99999999998853

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.70  E-value=9.4e-17  Score=107.57  Aligned_cols=111  Identities=24%  Similarity=0.287  Sum_probs=88.0

Q ss_pred             hhhhhhhhhh-------hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-
Q 032711            6 VEGLGNALRR-------KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-   77 (135)
Q Consensus         6 ~~~~~~~~~~-------~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-   77 (135)
                      ++++|.+...       +..+-|.+|.|||.+.+. ..|+..+|+||+||++.|++.+++.|.+....+++.+|.+... 
T Consensus       218 iaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~-~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGt  296 (419)
T KOG0663|consen  218 IADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGA-KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGT  296 (419)
T ss_pred             ecccchhhhhcCCcccCcceEEEeeecCHHHhcCC-cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCC
Confidence            5555554443       335778999999999987 4799999999999999999999999999888777776643110 


Q ss_pred             --------------------CCC---------C-CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           78 --------------------PPI---------P-DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        78 --------------------~~~---------~-~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                                          ...         + ..++....+|++.+|.+||.+|.++++.+.|.||..
T Consensus       297 Pte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e  366 (419)
T KOG0663|consen  297 PSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE  366 (419)
T ss_pred             CccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence                                001         1 114578899999999999999999999999999997

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.70  E-value=1.1e-16  Score=107.77  Aligned_cols=101  Identities=27%  Similarity=0.483  Sum_probs=76.3

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHHHcCCCCCCC------CcccH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----WVQALFKIARGELPPIP------DSVSR   86 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~-----~~~~~~~i~~~~~~~~~------~~~~~   86 (135)
                      ..++..|++||.+...  .++.++|+|++|+++|++++|+.||....     ..+....+.....+..+      ...+.
T Consensus       163 ~~~~~~y~~pE~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (287)
T cd06621         163 FTGTSFYMAPERIQGK--PYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSE  240 (287)
T ss_pred             ccCCccccCHHHhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHH
Confidence            4578899999998764  68899999999999999999999987552     22333333322211111      23457


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           87 DARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        87 ~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      .+.+++.+||..+|.+||++.+++.|+|+.....
T Consensus       241 ~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~  274 (287)
T cd06621         241 EFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK  274 (287)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence            8899999999999999999999999999965443

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.70  E-value=9e-17  Score=109.84  Aligned_cols=89  Identities=19%  Similarity=0.342  Sum_probs=81.7

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      ...||++|.+.++  .|+..+|+|++|+++||+++ |+.|+..-+..+....+..+.-...|.++++++..+|..||...
T Consensus       461 PvkWMslEal~n~--~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWall  538 (563)
T KOG1024|consen  461 PVKWMSLEALQNS--HYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALL  538 (563)
T ss_pred             cccccCHHHHhhh--hhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcC
Confidence            3579999999885  79999999999999999988 89999999999988888888878889999999999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032711          100 PNDRPTAAQLME  111 (135)
Q Consensus       100 p~~Rps~~~~l~  111 (135)
                      |++||+++|+..
T Consensus       539 peeRPsf~Qlv~  550 (563)
T KOG1024|consen  539 PEERPSFSQLVI  550 (563)
T ss_pred             cccCCCHHHHHH
Confidence            999999998753

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.70  E-value=9.3e-17  Score=108.27  Aligned_cols=101  Identities=29%  Similarity=0.441  Sum_probs=77.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC---CC-----------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG---EL-----------------   77 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~---~~-----------------   77 (135)
                      ..|+..|+|||++.+. ..++.++|+|++|++++++++|..||......+....+...   ..                 
T Consensus       163 ~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (294)
T PLN00009        163 EVVTLWYRAPEILLGS-RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAF  241 (294)
T ss_pred             CceeecccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhc
Confidence            4567899999998764 35788999999999999999999999876655444433210   00                 


Q ss_pred             CC--------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           78 PP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        78 ~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      +.        .....+.++.+++.+|+..+|++||++.+++.|+||....
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~  291 (294)
T PLN00009        242 PKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG  291 (294)
T ss_pred             ccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence            00        0123567889999999999999999999999999998754

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=1e-16  Score=106.13  Aligned_cols=98  Identities=34%  Similarity=0.608  Sum_probs=76.5

Q ss_pred             cccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC----CCCCcccHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP----PIPDSVSRDARDF   91 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~l   91 (135)
                      ...|+..|+|||.+... ...++.++|+|++|+++++|++|+.||.+.+.......+......    ..+...+.++.++
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  239 (262)
T cd06613         160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDF  239 (262)
T ss_pred             cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHH
Confidence            34788899999998653 125788999999999999999999999877655555444433221    1123346788999


Q ss_pred             HHHhcccCCCCCCCHHHHhhCcC
Q 032711           92 ILKCLQVNPNDRPTAAQLMEHPF  114 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~~~~  114 (135)
                      +.+||..+|.+||++++++.|+|
T Consensus       240 i~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         240 IKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHHHcCCChhhCCCHHHHhcCCC
Confidence            99999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.70  E-value=1.5e-16  Score=103.58  Aligned_cols=109  Identities=32%  Similarity=0.448  Sum_probs=85.9

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC---------------------
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---------------------   77 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~---------------------   77 (135)
                      +-|.+|.|||.+-+. ..|+..+|+||+||++.|++-|.+-|.+.++.+++..|..-..                     
T Consensus       162 V~TRWYRAPELLfGs-r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~  240 (318)
T KOG0659|consen  162 VVTRWYRAPELLFGS-RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQ  240 (318)
T ss_pred             eeeeeccChHHhccc-hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhc
Confidence            678899999999886 5799999999999999999999998999888888776643110                     


Q ss_pred             -CC-----CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC--CCCCCCCc
Q 032711           78 -PP-----IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP--TSWGLPTP  128 (135)
Q Consensus        78 -~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~--~~~~~~~~  128 (135)
                       +.     +-...+.++.+|+.+++.+||.+|++++|+++|+||+....  ..+.+|.|
T Consensus       241 ~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~~~lp~p  299 (318)
T KOG0659|consen  241 FPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPPSKLPIP  299 (318)
T ss_pred             CCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCChhhCcCC
Confidence             00     11234677899999999999999999999999999996433  33444444

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.70  E-value=1.4e-16  Score=107.62  Aligned_cols=102  Identities=27%  Similarity=0.523  Sum_probs=78.6

Q ss_pred             cccccccchhhhhccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHHHcCCCCCCC--CcccHHHHHHHH
Q 032711           19 VSRWNSLTDQVVNSKN--GGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIARGELPPIP--DSVSRDARDFIL   93 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~--~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~-~~~~~~i~~~~~~~~~--~~~~~~~~~li~   93 (135)
                      .|+..|+|||.+....  ..++.++|+||+|++++++++|+.||..... .+.+..+........+  ...+.++.+++.
T Consensus       175 ~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  254 (296)
T cd06618         175 AGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVD  254 (296)
T ss_pred             CCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHH
Confidence            5678899999987542  3478899999999999999999999976433 2334344433322222  246788999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      +||..+|.+||++++++.|+|+.....
T Consensus       255 ~~l~~~p~~Rp~~~~il~~~~~~~~~~  281 (296)
T cd06618         255 LCLTKDHRKRPKYRELLQHPFIRRYET  281 (296)
T ss_pred             HHccCChhhCCCHHHHhcChhhhccch
Confidence            999999999999999999999987544

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.70  E-value=1.9e-16  Score=106.15  Aligned_cols=92  Identities=20%  Similarity=0.401  Sum_probs=79.0

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+++.|+|||.+...  .++.++|+||+|++++++++ |..||.+....+....+......+.+...+..+.+++.+|+
T Consensus       186 ~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl  263 (283)
T cd05091         186 SLLPIRWMSPEAIMYG--KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECW  263 (283)
T ss_pred             ccCCccccCHHHHhcC--CCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHh
Confidence            3456789999999764  58899999999999999998 88898887777777777777666677788999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      +.+|.+||++.+++.
T Consensus       264 ~~~p~~RP~~~~i~~  278 (283)
T cd05091         264 NEFPSRRPRFKDIHS  278 (283)
T ss_pred             CCCcccCCCHHHHHH
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.70  E-value=1.1e-16  Score=109.88  Aligned_cols=110  Identities=29%  Similarity=0.306  Sum_probs=80.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC---------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG---------------------   75 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~---------------------   75 (135)
                      ...|+..|+|||.+... ..++.++|+||+|++++++++|+.||.+.........+...                     
T Consensus       171 ~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (337)
T cd07852         171 DYVATRWYRAPEILLGS-TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATML  249 (337)
T ss_pred             cccccccccCceeeecc-ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhh
Confidence            35688899999988654 35788999999999999999999999765443322221110                     


Q ss_pred             ------CC---CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCCCC
Q 032711           76 ------EL---PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPT  127 (135)
Q Consensus        76 ------~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~~~  127 (135)
                            ..   .......+.++.+++.+||+.+|.+||++.+++.|+|+............
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~~~~~~  310 (337)
T cd07852         250 DSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPSDEPVL  310 (337)
T ss_pred             hhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCCCCCCC
Confidence                  00   00112257889999999999999999999999999999876554444433

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.70  E-value=1.6e-16  Score=107.06  Aligned_cols=92  Identities=18%  Similarity=0.414  Sum_probs=76.9

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|+..|+|||.+...  .++.++|+||+|++++++++ |..||...+..+....+..+.....+...+..+.+++.+||
T Consensus       185 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  262 (291)
T cd05094         185 TMLPIRWMPPESIMYR--KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCW  262 (291)
T ss_pred             CCcceeecChHHhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHc
Confidence            4567789999999764  68889999999999999998 99999877766666666655555556667889999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      ..+|.+||++.++++
T Consensus       263 ~~~P~~Rpt~~~v~~  277 (291)
T cd05094         263 QREPQQRLNIKEIYK  277 (291)
T ss_pred             ccChhhCcCHHHHHH
Confidence            999999999998864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.70  E-value=2.1e-16  Score=106.66  Aligned_cols=103  Identities=33%  Similarity=0.459  Sum_probs=77.0

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC---------------------
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---------------------   77 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~---------------------   77 (135)
                      .++..|+|||.+.+. ..++.++|+|++|++++++++|.++|.+.+..+.+.++.....                     
T Consensus       163 ~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (298)
T cd07841         163 VVTRWYRAPELLFGA-RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKP  241 (298)
T ss_pred             ccceeeeCHHHHhCC-CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccc
Confidence            456789999988653 3578899999999999999999888876655443333321100                     


Q ss_pred             -CC-----CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           78 -PP-----IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        78 -~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                       ..     .....+..+.+++.+||..+|++||++.+++.|+||.+.....
T Consensus       242 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~  292 (298)
T cd07841         242 FPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPT  292 (298)
T ss_pred             cCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCC
Confidence             00     1123467889999999999999999999999999999865544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.69  E-value=1.8e-16  Score=104.30  Aligned_cols=96  Identities=31%  Similarity=0.510  Sum_probs=80.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...|+..|++||.....  ..+.++|+|++|++++++++|..||...+.......+.... ...+...+..+.+++.+|+
T Consensus       152 ~~~~~~~~~~Pe~~~~~--~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~i~~~l  228 (250)
T cd05123         152 TFCGTPEYLAPEVLLGK--GYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDP-LRFPEFLSPEARDLISGLL  228 (250)
T ss_pred             CCcCCccccChHHhCCC--CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC-CCCCCCCCHHHHHHHHHHh
Confidence            35678899999999764  57889999999999999999999998777655555554433 3566777899999999999


Q ss_pred             ccCCCCCCCH---HHHhhCcCC
Q 032711           97 QVNPNDRPTA---AQLMEHPFV  115 (135)
Q Consensus        97 ~~~p~~Rps~---~~~l~~~~~  115 (135)
                      ..+|++||++   ++++.|+||
T Consensus       229 ~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         229 QKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             cCCHhhCCCcccHHHHHhCCCC
Confidence            9999999999   899999997

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.69  E-value=1.1e-16  Score=111.55  Aligned_cols=102  Identities=26%  Similarity=0.404  Sum_probs=80.3

Q ss_pred             cccccccccchhhhhccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-C--CCCCcccHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKN--GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-P--PIPDSVSRDARDF   91 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~--~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-~--~~~~~~~~~~~~l   91 (135)
                      ..+||+.|+|||++....  ..++.++|+||+|+++|+|++|..||...+.......+..... .  +....++..+.++
T Consensus       202 ~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  281 (371)
T cd05622         202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL  281 (371)
T ss_pred             CcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHH
Confidence            567999999999997642  2378899999999999999999999988877666666654332 1  2234578999999


Q ss_pred             HHHhcccCCC--CCCCHHHHhhCcCCCCC
Q 032711           92 ILKCLQVNPN--DRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        92 i~~~l~~~p~--~Rps~~~~l~~~~~~~~  118 (135)
                      +.+|+..++.  .|+++++++.|+||...
T Consensus       282 i~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         282 ICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             HHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence            9999984443  27899999999999763

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.69  E-value=1.8e-16  Score=106.08  Aligned_cols=90  Identities=20%  Similarity=0.352  Sum_probs=74.5

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      +..|+|||++...  .++.++|+||+|++++++++ |..||.+....+....+........+..++..+.+++.+|+..+
T Consensus       184 ~~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~  261 (277)
T cd05036         184 PIKWMPPEAFLDG--IFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHT  261 (277)
T ss_pred             cHhhCCHHHHhcC--CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCC
Confidence            4579999999764  58999999999999999996 88999877666655555544444556678899999999999999


Q ss_pred             CCCCCCHHHHhhC
Q 032711          100 PNDRPTAAQLMEH  112 (135)
Q Consensus       100 p~~Rps~~~~l~~  112 (135)
                      |++||++.++++|
T Consensus       262 p~~Rps~~~vl~~  274 (277)
T cd05036         262 PEDRPNFATILER  274 (277)
T ss_pred             cccCcCHHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.69  E-value=5.6e-17  Score=112.40  Aligned_cols=99  Identities=22%  Similarity=0.302  Sum_probs=69.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-cH---------HHHHHHHHcC--C-CCCC---
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EW---------VQALFKIARG--E-LPPI---   80 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~-~~---------~~~~~~i~~~--~-~~~~---   80 (135)
                      ...||..|+|||++.+.  .++.++|+||+|+++|+++++..++... ..         ...+..+...  . ....   
T Consensus       215 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  292 (357)
T PHA03209        215 GLAGTVETNAPEVLARD--KYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRD  292 (357)
T ss_pred             cccccccccCCeecCCC--CCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCC
Confidence            35789999999999874  6899999999999999999865544321 10         0111111110  0 0000   


Q ss_pred             ---------------------------CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           81 ---------------------------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        81 ---------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                                                 ....+.++.+++.+||..||.+||++.+++.||||+.
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        293 PGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             CccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence                                       0123556677999999999999999999999999975

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.69  E-value=8.1e-17  Score=112.13  Aligned_cols=102  Identities=27%  Similarity=0.435  Sum_probs=80.4

Q ss_pred             cccccccccchhhhhccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-CCCC--CcccHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKN--GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIP--DSVSRDARDF   91 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~--~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-~~~~--~~~~~~~~~l   91 (135)
                      +.+||+.|+|||++....  ..++.++|+||+|+++|+|++|..||.+.+.......+..... ...+  ..++..+.++
T Consensus       202 ~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~l  281 (370)
T cd05621         202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNL  281 (370)
T ss_pred             cCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHH
Confidence            567999999999997642  2378899999999999999999999988877666666654322 2223  3468899999


Q ss_pred             HHHhcccCCC--CCCCHHHHhhCcCCCCC
Q 032711           92 ILKCLQVNPN--DRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        92 i~~~l~~~p~--~Rps~~~~l~~~~~~~~  118 (135)
                      +.+|+..++.  .|+++.+++.||||...
T Consensus       282 i~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         282 ICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             HHHHccCchhccCCCCHHHHhcCcccCCC
Confidence            9999975553  38899999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.69  E-value=1.8e-16  Score=108.87  Aligned_cols=105  Identities=29%  Similarity=0.412  Sum_probs=78.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc-----------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR-----------------------   74 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~-----------------------   74 (135)
                      .+|+..|+|||.+... ..++.++|+|++|++++++++|+.||...+....+..+..                       
T Consensus       171 ~~~~~~y~~PE~~~~~-~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  249 (334)
T cd07855         171 YVATRWYRAPELLLSL-PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQ  249 (334)
T ss_pred             ccccccccChHHhcCC-cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHh
Confidence            4788899999998653 3578999999999999999999999976654332221111                       


Q ss_pred             --CCCCCC-----CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCC
Q 032711           75 --GELPPI-----PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSW  123 (135)
Q Consensus        75 --~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~  123 (135)
                        ......     ....+.++.+++.+||+.+|.+||++++++.||||........
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~  305 (334)
T cd07855         250 NLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDD  305 (334)
T ss_pred             hcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCcc
Confidence              000011     1235788999999999999999999999999999987655444

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.69  E-value=1.8e-16  Score=106.40  Aligned_cols=98  Identities=29%  Similarity=0.586  Sum_probs=75.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC---------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG---------------------   75 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~---------------------   75 (135)
                      ...|+..|+|||++... ..++.++|+|++|++++++++|..||.+.+..+....+...                     
T Consensus       160 ~~~~~~~~~~PE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd07833         160 DYVATRWYRAPELLVGD-TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV  238 (288)
T ss_pred             CcccccCCcCCchhcCC-CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence            35678889999999764 25789999999999999999999999776554433322110                     


Q ss_pred             CCC----------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           76 ELP----------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        76 ~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      ...          ..+..++.++.+++.+||..+|++||++++++.|+||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence            000          0122347889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.69  E-value=8.4e-17  Score=110.45  Aligned_cols=101  Identities=25%  Similarity=0.436  Sum_probs=79.2

Q ss_pred             ccccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC----CCCCCcccHHHHH
Q 032711           18 HVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL----PPIPDSVSRDARD   90 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~   90 (135)
                      .+||+.|+|||++...   ...++.++|+||+|+++|++++|+.||...+..+.+..+.....    +.....+++++.+
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~  242 (332)
T cd05623         163 AVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKD  242 (332)
T ss_pred             cccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHH
Confidence            5799999999998631   13578899999999999999999999988877777666654332    2223457899999


Q ss_pred             HHHHhcccCCC--CCCCHHHHhhCcCCCCC
Q 032711           91 FILKCLQVNPN--DRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        91 li~~~l~~~p~--~Rps~~~~l~~~~~~~~  118 (135)
                      ++.+|+..++.  .|+++.++++|+||...
T Consensus       243 li~~ll~~~~~r~~r~~~~~~~~h~~f~~~  272 (332)
T cd05623         243 LIRRLICSREHRLGQNGIEDFKQHPFFTGI  272 (332)
T ss_pred             HHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence            99998865443  46899999999999863

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.69  E-value=2.5e-16  Score=104.26  Aligned_cols=98  Identities=30%  Similarity=0.507  Sum_probs=81.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCc--ccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDS--VSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~li~~   94 (135)
                      ...++..|++||.....  .++.++|+|++|++++++++|..||...........+..+.. ..+..  .+..+.+++.+
T Consensus       160 ~~~~~~~~~~Pe~~~~~--~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~  236 (265)
T cd05579         160 RIVGTPDYIAPEVILGQ--GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKI-EWPEDVEVSDEAIDLISK  236 (265)
T ss_pred             CcccCccccCHHHhcCC--CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc-CCCccccCCHHHHHHHHH
Confidence            34678899999998764  478899999999999999999999988776666666554333 22333  38899999999


Q ss_pred             hcccCCCCCCCH---HHHhhCcCCCC
Q 032711           95 CLQVNPNDRPTA---AQLMEHPFVKR  117 (135)
Q Consensus        95 ~l~~~p~~Rps~---~~~l~~~~~~~  117 (135)
                      |++.+|.+||++   .+++.|+||+.
T Consensus       237 ~l~~~p~~Rpt~~~~~~~l~~~~~~~  262 (265)
T cd05579         237 LLVPDPEKRLGAKSIEEIKNHPFFKG  262 (265)
T ss_pred             HhcCCHhhcCCCccHHHHhcCccccC
Confidence            999999999999   99999999975

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.69  E-value=1e-16  Score=106.10  Aligned_cols=97  Identities=27%  Similarity=0.375  Sum_probs=78.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--VQALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ...|+..|++||.+...  .++.++|+|++|++++++++|..||.....  ...+...........+...+..+.+++.+
T Consensus       158 ~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  235 (258)
T cd05578         158 STSGTPGYMAPEVLCRQ--GYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINK  235 (258)
T ss_pred             ccCCChhhcCHHHHccc--CCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHH
Confidence            35678899999999775  578999999999999999999999987653  23333333323345566788999999999


Q ss_pred             hcccCCCCCCCH--HHHhhCcCC
Q 032711           95 CLQVNPNDRPTA--AQLMEHPFV  115 (135)
Q Consensus        95 ~l~~~p~~Rps~--~~~l~~~~~  115 (135)
                      ||..+|.+|+++  .+++.|+||
T Consensus       236 ~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         236 LLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             HccCChhHcCCccHHHHhcCCCC
Confidence            999999999999  999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.69  E-value=1.8e-16  Score=106.25  Aligned_cols=97  Identities=29%  Similarity=0.418  Sum_probs=73.6

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC--------------------C
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE--------------------L   77 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~--------------------~   77 (135)
                      ..++..|++||++... ..++.++|+|++|++++++++|+.||.+.+..+....+....                    .
T Consensus       160 ~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07836         160 EVVTLWYRAPDVLLGS-RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTF  238 (284)
T ss_pred             ccccccccChHHhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccc
Confidence            4568889999998764 357889999999999999999999998766544333221110                    0


Q ss_pred             CC--------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           78 PP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        78 ~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      +.        .....+..+.+++.+|++.+|.+||++.+++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         239 PRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             cCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            00        012346778899999999999999999999999997

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.69  E-value=2.4e-16  Score=108.17  Aligned_cols=101  Identities=26%  Similarity=0.392  Sum_probs=76.0

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC----------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG----------------------   75 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~----------------------   75 (135)
                      ..|+..|+|||..... ..++.++|+||+|++++++++|+.||.+.+....+..+...                      
T Consensus       169 ~~g~~~y~aPE~~~~~-~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (332)
T cd07857         169 YVATRWYRAPEIMLSF-QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIR  247 (332)
T ss_pred             cccCccccCcHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHH
Confidence            5789999999998763 35789999999999999999999998765533222211110                      


Q ss_pred             ---CC-----CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           76 ---EL-----PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        76 ---~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                         ..     .......+..+.+++.+|++.+|.+||++.+++.|||+..+.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~  299 (332)
T cd07857         248 SLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH  299 (332)
T ss_pred             hccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence               00     001123467899999999999999999999999999998654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.69  E-value=2.2e-16  Score=105.62  Aligned_cols=97  Identities=32%  Similarity=0.493  Sum_probs=74.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC-------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-------------------   78 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~-------------------   78 (135)
                      ..++..|++||.+.+. ..++.++|+|++|++++++++|+.+|...+..+.+..+......                   
T Consensus       158 ~~~~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd05118         158 YVVTRWYRAPELLLGD-KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFS  236 (283)
T ss_pred             ccCcccccCcHHHhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhh
Confidence            4577889999998764 35789999999999999999999999776654443332211000                   


Q ss_pred             ----------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           79 ----------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        79 ----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                                ......+.++.+++.+||..+|.+||++++++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         237 FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             hccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence                      0112356789999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.69  E-value=2.9e-16  Score=104.58  Aligned_cols=91  Identities=20%  Similarity=0.388  Sum_probs=76.2

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||++...  .++.++|+||+|++++++++ |..||.+....+....+......+.+..++..+.+++.+||.
T Consensus       169 ~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~  246 (266)
T cd05064         169 KSPVLWAAPEAIQYH--HFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQ  246 (266)
T ss_pred             CCceeecCHHHHhhC--CccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcC
Confidence            346789999998764  68999999999999999775 999998877766666666555556677788999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++++
T Consensus       247 ~~p~~RP~~~~i~~  260 (266)
T cd05064         247 KERGERPRFSQIHS  260 (266)
T ss_pred             CCchhCCCHHHHHH
Confidence            99999999998865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.69  E-value=2.3e-16  Score=106.82  Aligned_cols=97  Identities=28%  Similarity=0.433  Sum_probs=71.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc--CCCC----------------C
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR--GELP----------------P   79 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~--~~~~----------------~   79 (135)
                      ..++..|+|||.+.+. ..++.++|+||+|++++++++|..||.+.+.......+..  +..+                .
T Consensus       183 ~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (310)
T cd07865         183 RVVTLWYRPPELLLGE-RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKME  261 (310)
T ss_pred             cccCccccCcHHhcCC-cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhcc
Confidence            4577889999988654 2468899999999999999999999877654333222111  0000                0


Q ss_pred             C-------------CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           80 I-------------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        80 ~-------------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      .             +......+.+++.+||..+|.+||++.++++|+||
T Consensus       262 ~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         262 LPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             CCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            0             01124567899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.69  E-value=2.5e-16  Score=106.12  Aligned_cols=97  Identities=25%  Similarity=0.385  Sum_probs=73.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--------------------   77 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--------------------   77 (135)
                      ..++..|+|||.+.+. ..++.++|+||+|++++++++|..||..........++.....                    
T Consensus       166 ~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (293)
T cd07843         166 LVVTLWYRAPELLLGA-KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKT  244 (293)
T ss_pred             ccccccccCchhhcCC-ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccc
Confidence            3567889999998764 2468899999999999999999999977655443332211000                    


Q ss_pred             ----------CCCCCc-ccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           78 ----------PPIPDS-VSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        78 ----------~~~~~~-~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                                ...+.. ++..+.+++.+||+.+|++||++.+++.|+||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         245 FTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             cccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence                      011222 57788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.69  E-value=2e-16  Score=105.99  Aligned_cols=96  Identities=27%  Similarity=0.434  Sum_probs=74.2

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC------------------CC
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL------------------PP   79 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~------------------~~   79 (135)
                      ..++..|+|||++.+.  .++.++|+|++|+++++|++|.+||......+.+..+.....                  ..
T Consensus       166 ~~~~~~~~~PE~~~~~--~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (287)
T cd07838         166 VVVTLWYRAPEVLLQS--SYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPS  243 (287)
T ss_pred             ccccccccChHHhccC--CCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhccc
Confidence            3578889999999764  578899999999999999999999987766554444322100                  00


Q ss_pred             C--------CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           80 I--------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        80 ~--------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      .        ....+..+.+++.+||..+|.+||++.+++.|+||
T Consensus       244 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         244 YTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             ccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence            0        01235677899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.69  E-value=2.2e-16  Score=105.73  Aligned_cols=100  Identities=24%  Similarity=0.376  Sum_probs=77.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH---HHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---VQALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ..|+..|++||++.+.  .++.++|+|++|++++++++|+.||.....   ...+...........+...+..+.+++.+
T Consensus       154 ~~~~~~y~~PE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  231 (277)
T cd05577         154 RAGTPGYMAPEVLQGE--VYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEA  231 (277)
T ss_pred             ccCCCCcCCHHHhcCC--CCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHH
Confidence            4677899999998764  588899999999999999999999966543   12222211122234556678999999999


Q ss_pred             hcccCCCCCC-----CHHHHhhCcCCCCCC
Q 032711           95 CLQVNPNDRP-----TAAQLMEHPFVKRPL  119 (135)
Q Consensus        95 ~l~~~p~~Rp-----s~~~~l~~~~~~~~~  119 (135)
                      ||+.+|.+||     ++.+++.||||....
T Consensus       232 ~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~  261 (277)
T cd05577         232 LLQKDPEKRLGCRGGSADEVREHPLFKDLN  261 (277)
T ss_pred             HccCChhHccCCCcccHHHHHhChhhhcCC
Confidence            9999999999     888899999997644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.68  E-value=1.9e-16  Score=107.56  Aligned_cols=98  Identities=26%  Similarity=0.360  Sum_probs=71.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHH---------HHHHHHc-------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQ---------ALFKIAR-------------   74 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~---------~~~~i~~-------------   74 (135)
                      ...++..|+|||++.+. ..++.++|+||+|++++++++|..||.+.....         .+..+..             
T Consensus       174 ~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  252 (316)
T cd07842         174 PVVVTIWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDI  252 (316)
T ss_pred             CccccccccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHH
Confidence            34678899999998764 357889999999999999999999986543211         1100000             


Q ss_pred             -----------C-CCCCCC-----------CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           75 -----------G-ELPPIP-----------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        75 -----------~-~~~~~~-----------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                                 . .....+           ...+.++.+++.+||..+|++||++.+++.||||
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         253 KKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             hhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence                       0 000011           1345678899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.68  E-value=3e-16  Score=103.87  Aligned_cols=90  Identities=24%  Similarity=0.338  Sum_probs=75.9

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|+|||++...  .++.++|+||+|++++++++ |+.||...+..+....+..+.....+...+..+.+++.+||..
T Consensus       163 ~~~~y~aPE~~~~~--~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~  240 (256)
T cd05114         163 FPVKWSPPEVFNFS--KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHE  240 (256)
T ss_pred             CchhhCChhhcccC--ccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccC
Confidence            45579999999764  68899999999999999999 8999988877777777766554445566778899999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032711           99 NPNDRPTAAQLME  111 (135)
Q Consensus        99 ~p~~Rps~~~~l~  111 (135)
                      +|.+||++.++++
T Consensus       241 ~p~~Rps~~~l~~  253 (256)
T cd05114         241 KPEGRPTFAELLR  253 (256)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.68  E-value=2.9e-16  Score=103.97  Aligned_cols=89  Identities=24%  Similarity=0.494  Sum_probs=74.6

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      +..|+|||.+...  .++.++|+||+|++++++++ |..||...+..+....+........+...+..+.+++.+|+..+
T Consensus       161 ~~~y~aPE~~~~~--~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  238 (257)
T cd05060         161 PLKWYAPECINYG--KFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYR  238 (257)
T ss_pred             cccccCHHHhcCC--CCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCC
Confidence            4579999999764  68999999999999999997 99999877766666566555555566778899999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032711          100 PNDRPTAAQLME  111 (135)
Q Consensus       100 p~~Rps~~~~l~  111 (135)
                      |++||++.++.+
T Consensus       239 p~~Rp~~~~l~~  250 (257)
T cd05060         239 PEDRPTFSELES  250 (257)
T ss_pred             hhhCcCHHHHHH
Confidence            999999998864

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.68  E-value=2.6e-16  Score=105.30  Aligned_cols=92  Identities=23%  Similarity=0.386  Sum_probs=76.5

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||.+...  .++.++|+||+|++++++++ |..||.+.+.......+........+...+..+.+++.+|++
T Consensus       182 ~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  259 (277)
T cd05062         182 LLPVRWMSPESLKDG--VFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQ  259 (277)
T ss_pred             ccCHhhcChhHhhcC--CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcC
Confidence            446789999999764  68999999999999999998 788988777666665555555555667788899999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032711           98 VNPNDRPTAAQLMEH  112 (135)
Q Consensus        98 ~~p~~Rps~~~~l~~  112 (135)
                      .+|.+||++.+++.+
T Consensus       260 ~~p~~Rps~~e~l~~  274 (277)
T cd05062         260 YNPKMRPSFLEIISS  274 (277)
T ss_pred             CChhhCcCHHHHHHH
Confidence            999999999998753

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.68  E-value=9.6e-17  Score=107.51  Aligned_cols=104  Identities=29%  Similarity=0.540  Sum_probs=80.1

Q ss_pred             ccccccccchhhhhccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHcCCCCCCC-CcccHHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKN--GGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WVQALFKIARGELPPIP-DSVSRDARDFIL   93 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~--~~~~~~~dvws~G~~l~~l~~g~~p~~~~~-~~~~~~~i~~~~~~~~~-~~~~~~~~~li~   93 (135)
                      ..|+..|+|||++.+..  ..++.++|+|++|++++++++|+.||.... ..+.+..+........+ ..++.++.+++.
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  242 (283)
T cd06617         163 DAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVN  242 (283)
T ss_pred             ccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHH
Confidence            56888999999886521  246889999999999999999999996533 22333333333333333 356789999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      +||..+|.+||++.+++.|+||.....+
T Consensus       243 ~~l~~~p~~Rp~~~~il~~~~~~~~~~~  270 (283)
T cd06617         243 KCLKKNYKERPNYPELLQHPFFELHLSK  270 (283)
T ss_pred             HHccCChhhCcCHHHHhcCchhhhcccc
Confidence            9999999999999999999999986644

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.68  E-value=1.6e-16  Score=119.60  Aligned_cols=88  Identities=19%  Similarity=0.428  Sum_probs=78.6

Q ss_pred             ccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccCC
Q 032711           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP  100 (135)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p  100 (135)
                      ..|||||.+...  .++.++||||+|+++||+++ |..||.+.+..+.+.....+.-.+.|..++..+.++|..||..+|
T Consensus       868 vkWm~PEsl~d~--iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~p  945 (1025)
T KOG1095|consen  868 VKWMPPESLKDG--IFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDP  945 (1025)
T ss_pred             eecCCHHHHhhc--ccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCCh
Confidence            489999999974  79999999999999999999 889999988888887666665667888899999999999999999


Q ss_pred             CCCCCHHHHhh
Q 032711          101 NDRPTAAQLME  111 (135)
Q Consensus       101 ~~Rps~~~~l~  111 (135)
                      .+||++..++.
T Consensus       946 e~RP~F~~i~~  956 (1025)
T KOG1095|consen  946 EDRPSFRTIVE  956 (1025)
T ss_pred             hhCccHHHHHh
Confidence            99999998875

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.68  E-value=5e-16  Score=103.22  Aligned_cols=89  Identities=21%  Similarity=0.444  Sum_probs=73.8

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      +..|+|||.+...  .++.++|+||+|++++++++ |..||.+.+..+....+........+...+..+.+++.+||..+
T Consensus       168 ~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  245 (263)
T cd05052         168 PIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWN  245 (263)
T ss_pred             ccccCCHHHhccC--CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCC
Confidence            5679999998764  67889999999999999998 88999877666555555544444556678899999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032711          100 PNDRPTAAQLME  111 (135)
Q Consensus       100 p~~Rps~~~~l~  111 (135)
                      |++||++.++++
T Consensus       246 p~~Rp~~~~l~~  257 (263)
T cd05052         246 PSDRPSFAEIHQ  257 (263)
T ss_pred             cccCCCHHHHHH
Confidence            999999999865

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.68  E-value=3.7e-16  Score=104.79  Aligned_cols=91  Identities=18%  Similarity=0.352  Sum_probs=76.0

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .+++.|+|||.+.+.  .++.++|+||+|++++++++ |..||......+....+..+.....+..++..+.+++.+||.
T Consensus       185 ~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  262 (280)
T cd05092         185 MLPIRWMPPESILYR--KFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQ  262 (280)
T ss_pred             cccccccCHHHhccC--CcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHcc
Confidence            346789999999764  68999999999999999998 899997777666666666555445566788999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++..
T Consensus       263 ~~P~~Rp~~~~l~~  276 (280)
T cd05092         263 REPQQRMVIKDIHS  276 (280)
T ss_pred             CChhhCCCHHHHHH
Confidence            99999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.68  E-value=3.2e-16  Score=107.71  Aligned_cols=92  Identities=24%  Similarity=0.476  Sum_probs=72.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHH-HHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQAL-FKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ..++..|+|||++...  .++.++||||+|+++|++++ |..||.+......+ ..+..+.....+...+..+.+++.+|
T Consensus       236 ~~~~~~y~aPE~~~~~--~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  313 (338)
T cd05102         236 ARLPLKWMAPESIFDK--VYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLAC  313 (338)
T ss_pred             CCCCccccCcHHhhcC--CCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            3456789999999764  68999999999999999997 99999775433333 33333333445667788999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032711           96 LQVNPNDRPTAAQLME  111 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~  111 (135)
                      |..+|.+||++.++++
T Consensus       314 l~~dp~~RPs~~el~~  329 (338)
T cd05102         314 WQGDPKERPTFSALVE  329 (338)
T ss_pred             ccCChhhCcCHHHHHH
Confidence            9999999999999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.68  E-value=5.5e-17  Score=105.96  Aligned_cols=109  Identities=23%  Similarity=0.400  Sum_probs=90.0

Q ss_pred             hhhhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHHHcCCCCCCC-----Cccc
Q 032711           12 ALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIARGELPPIP-----DSVS   85 (135)
Q Consensus        12 ~~~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~-~~~~~~i~~~~~~~~~-----~~~~   85 (135)
                      +...+..+|-..|||||.+.....+|+.++|+||+|+.++|+.+|..|+.+++. .+++.++..+..+.+.     ...+
T Consensus       221 SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s  300 (361)
T KOG1006|consen  221 SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYS  300 (361)
T ss_pred             HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccC
Confidence            344445688889999999998766799999999999999999999999988765 5677777766654332     2367


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           86 RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        86 ~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      ..+..++..|+..|-+.||+..+++.++|++...-
T Consensus       301 ~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~  335 (361)
T KOG1006|consen  301 FSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAV  335 (361)
T ss_pred             HHHHHHHHHHhhcccccCcchhhhhcCchhhhhhh
Confidence            88999999999999999999999999999986443

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.68  E-value=3.1e-16  Score=108.19  Aligned_cols=102  Identities=26%  Similarity=0.340  Sum_probs=76.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC---------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE---------------------   76 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~---------------------   76 (135)
                      ..|+..|+|||.+.+. ..++.++|+|++|++++++++|+.||...+....+..+....                     
T Consensus       177 ~~~~~~y~aPE~~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (345)
T cd07877         177 YVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ  255 (345)
T ss_pred             cccCCCccCHHHHhCc-cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHH
Confidence            4678899999998763 357889999999999999999999997655433322221100                     


Q ss_pred             ----CC-----CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           77 ----LP-----PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        77 ----~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                          .+     ......++++.+++.+|++.+|.+|+++.+++.|+||.....
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~  308 (345)
T cd07877         256 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  308 (345)
T ss_pred             HhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence                00     001135678899999999999999999999999999986444

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.68  E-value=1.7e-16  Score=105.58  Aligned_cols=97  Identities=30%  Similarity=0.511  Sum_probs=73.3

Q ss_pred             ccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC----CCCCcccHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP----PIPDSVSRDARDFI   92 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~li   92 (135)
                      ..|+..|+|||.+... ...++.++|+||+|++++++++|..||...........+......    .....++..+.+++
T Consensus       166 ~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  245 (267)
T cd06646         166 FIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFV  245 (267)
T ss_pred             cccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHH
Confidence            4688899999988532 234778999999999999999999998765543333332222211    11234678899999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPF  114 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~  114 (135)
                      .+||..+|.+||+++++++|.|
T Consensus       246 ~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         246 KISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HHHhhCChhhCcCHHHHhcCCC
Confidence            9999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.68  E-value=1.5e-16  Score=105.22  Aligned_cols=98  Identities=30%  Similarity=0.490  Sum_probs=74.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH---HHHHHHHHcCCCC---CCCCcccHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---VQALFKIARGELP---PIPDSVSRDARD   90 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~---~~~~~~i~~~~~~---~~~~~~~~~~~~   90 (135)
                      ...++..|+|||++... ..++.++|+|++|+++++|++|..||...+.   .............   .........+.+
T Consensus       157 ~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  235 (260)
T PF00069_consen  157 PFVGTPEYMAPEVLQQG-KKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRD  235 (260)
T ss_dssp             SSSSSGGGSCHHHHTTT-SSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHH
T ss_pred             ccccccccccccccccc-ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHH
Confidence            45789999999998722 3689999999999999999999999987732   2222222221110   111122478999


Q ss_pred             HHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           91 FILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        91 li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      ++.+||+.+|.+||++.++++||||
T Consensus       236 li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  236 LIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             HHHHHccCChhHCcCHHHHhcCCCC
Confidence            9999999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=3.1e-16  Score=107.67  Aligned_cols=101  Identities=26%  Similarity=0.456  Sum_probs=77.3

Q ss_pred             ccccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC----CCCCCcccHHHHH
Q 032711           18 HVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL----PPIPDSVSRDARD   90 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~   90 (135)
                      .+||+.|+|||++...   ...++.++|+||+|+++|+|++|+.||.+.+..+....+.....    +......+..+.+
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  242 (331)
T cd05597         163 AVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKD  242 (331)
T ss_pred             eeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHH
Confidence            4699999999999742   12478899999999999999999999988776666655543321    1222346889999


Q ss_pred             HHHHhcccCCC--CCCCHHHHhhCcCCCCC
Q 032711           91 FILKCLQVNPN--DRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        91 li~~~l~~~p~--~Rps~~~~l~~~~~~~~  118 (135)
                      ++.+|+..++.  .|+++++++.||||...
T Consensus       243 li~~ll~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         243 LIRRLICSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             HHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence            99998865443  47899999999999764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.68  E-value=3.8e-16  Score=105.54  Aligned_cols=96  Identities=23%  Similarity=0.366  Sum_probs=73.7

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc---CCCC-----------------
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR---GELP-----------------   78 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~---~~~~-----------------   78 (135)
                      .++..|++||.+... ..++.++|+|++|++++++++|+.||...+..+.+..+..   ....                 
T Consensus       178 ~~~~~y~~PE~~~~~-~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (302)
T cd07864         178 VITLWYRPPELLLGE-ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKP  256 (302)
T ss_pred             eeccCccChHHhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccccccccccc
Confidence            457789999998754 3578899999999999999999999977665444333222   1100                 


Q ss_pred             ---------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           79 ---------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        79 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                               .....++..+.+++.+||..+|.+||++.+++.|+||
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         257 KKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             ccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence                     0012357889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.68  E-value=1.2e-16  Score=120.04  Aligned_cols=104  Identities=27%  Similarity=0.392  Sum_probs=86.3

Q ss_pred             hcccccccccchhhhhccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-CCCC--CcccHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKN---GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIP--DSVSRDAR   89 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~---~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-~~~~--~~~~~~~~   89 (135)
                      ..-+|||-|++||++...+   +.|+..||.||+|+++|||+.|..||..+.-.+.+.+|..+.. ...|  ..++.+++
T Consensus       234 ~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeak  313 (1317)
T KOG0612|consen  234 SVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAK  313 (1317)
T ss_pred             ccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHH
Confidence            3469999999999998532   4689999999999999999999999999888888988877632 2333  56899999


Q ss_pred             HHHHHhcccCCCCCCC---HHHHhhCcCCCCCCC
Q 032711           90 DFILKCLQVNPNDRPT---AAQLMEHPFVKRPLP  120 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps---~~~~l~~~~~~~~~~  120 (135)
                      +||.+++. +|+.|..   ++++..||||.+..+
T Consensus       314 dLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W  346 (1317)
T KOG0612|consen  314 DLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDW  346 (1317)
T ss_pred             HHHHHHhc-ChhhhcccccHHHHHhCccccCCCh
Confidence            99998764 4667776   999999999998655

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.68  E-value=1e-16  Score=120.90  Aligned_cols=97  Identities=16%  Similarity=0.244  Sum_probs=71.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .+||+.|+|||++.+.  .|+.++||||+||++|||+++..|+.....  ....+.....++...........++.+||.
T Consensus       175 ~~gt~~Y~APE~~~~~--~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~  250 (793)
T PLN00181        175 AMEMSWYTSPEEDNGS--SSNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHRVLPPQILLNWPKEASFCLWLLH  250 (793)
T ss_pred             cCCCcceEChhhhccC--CCCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHhhcChhhhhcCHHHHHHHHHhCC
Confidence            4689999999999774  689999999999999999998887643221  122221111111111224556788999999


Q ss_pred             cCCCCCCCHHHHhhCcCCCCC
Q 032711           98 VNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        98 ~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      .+|.+||++.++++|+||...
T Consensus       251 ~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        251 PEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             CChhhCcChHHHhhchhhhhh
Confidence            999999999999999999864

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.68  E-value=4.6e-16  Score=104.36  Aligned_cols=93  Identities=17%  Similarity=0.407  Sum_probs=77.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..++..|+|||.+.+.  .++.++|+||+|++++++++ |..||.+.........+......+.+..++..+.+++.+|+
T Consensus       186 ~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  263 (283)
T cd05090         186 SLLPIRWMPPEAIMYG--KFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECW  263 (283)
T ss_pred             CCccceecChHHhccC--CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHc
Confidence            3456679999998764  58999999999999999998 88899877766666666666555667778899999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..+|.+||++.+++++
T Consensus       264 ~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         264 QEGPSRRPRFKDIHTR  279 (283)
T ss_pred             ccCcccCcCHHHHHHH
Confidence            9999999999998763

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.68  E-value=6.2e-16  Score=104.11  Aligned_cols=98  Identities=23%  Similarity=0.421  Sum_probs=80.0

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||.+...  .++.++|+||+|++++++++ |..||.+....+....+..+.....+...+..+.+++.+|++
T Consensus       182 ~~~~~y~~pE~~~~~--~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  259 (288)
T cd05061         182 LLPVRWMAPESLKDG--VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQ  259 (288)
T ss_pred             cccccccCHHHhccC--CCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            446679999998764  57899999999999999998 788888777666665555555555566678899999999999


Q ss_pred             cCCCCCCCHHHHhh------CcCCCCC
Q 032711           98 VNPNDRPTAAQLME------HPFVKRP  118 (135)
Q Consensus        98 ~~p~~Rps~~~~l~------~~~~~~~  118 (135)
                      .+|++||++.++++      |++|+..
T Consensus       260 ~~p~~Rps~~~ll~~l~~~~~~~~~~~  286 (288)
T cd05061         260 FNPKMRPTFLEIVNLLKDDLHPSFPEV  286 (288)
T ss_pred             CChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence            99999999999875      7888753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.68  E-value=5e-16  Score=102.56  Aligned_cols=94  Identities=24%  Similarity=0.457  Sum_probs=79.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...++..|+|||.+...  .++.++|+|++|++++++++ |..||...........+........+..++.++.+++.+|
T Consensus       166 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  243 (262)
T cd00192         166 GGKLPIRWMAPESLKDG--IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYELMLSC  243 (262)
T ss_pred             CCCcCccccCHHHhccC--CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHHHHHHHH
Confidence            34578899999998774  68999999999999999998 6899988877666666665555556677889999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032711           96 LQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~  112 (135)
                      +..+|++||++.+++.+
T Consensus       244 l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         244 WQLDPEDRPTFSELVER  260 (262)
T ss_pred             ccCCcccCcCHHHHHHh
Confidence            99999999999999864

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.67  E-value=3.2e-16  Score=104.93  Aligned_cols=97  Identities=25%  Similarity=0.369  Sum_probs=73.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC-------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-------------------   78 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~-------------------   78 (135)
                      ..++..|+|||.+.+. ..++.++|+|++|++++++++|+.||...+.......+......                   
T Consensus       161 ~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd07840         161 RVITLWYRPPELLLGA-TRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLK  239 (287)
T ss_pred             cccccccCCceeeEcc-ccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhcc
Confidence            3567789999987654 35789999999999999999999999876654443332211000                   


Q ss_pred             ---C--------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           79 ---P--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        79 ---~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                         .        ....++..+.+++.+||..+|.+||++++++.|+||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         240 PKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             ccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence               0        011137788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.67  E-value=1.3e-16  Score=106.01  Aligned_cols=91  Identities=24%  Similarity=0.471  Sum_probs=74.9

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .+...|+|||.+...  .++.++||||+|++++|+++ |+.||.+.+..+....+........+..++..+.+++.+||.
T Consensus       166 ~~~~~~~aPE~~~~~--~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~  243 (259)
T PF07714_consen  166 QLPLRYLAPEVLKDG--EYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWS  243 (259)
T ss_dssp             ESGGGGS-HHHHHHS--EESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-
T ss_pred             ccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccceeccchhHHHHHHHHHHcC
Confidence            466789999999875  58999999999999999999 678998887777777776665556677789999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++++
T Consensus       244 ~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  244 HDPEKRPSFQEILQ  257 (259)
T ss_dssp             SSGGGS--HHHHHH
T ss_pred             CChhhCcCHHHHHh
Confidence            99999999999874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.67  E-value=6e-16  Score=102.55  Aligned_cols=91  Identities=19%  Similarity=0.297  Sum_probs=75.6

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|++||+....  .++.++|+||+|++++++++ |..||...+..+....+........+...+..+.+++.+||..
T Consensus       163 ~~~~y~~pe~~~~~--~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  240 (256)
T cd05113         163 FPVRWSPPEVLLYS--KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWHE  240 (256)
T ss_pred             cChhhCCHHHHhcC--cccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCC
Confidence            45679999999764  58889999999999999998 9999987776666666665554445566788999999999999


Q ss_pred             CCCCCCCHHHHhhC
Q 032711           99 NPNDRPTAAQLMEH  112 (135)
Q Consensus        99 ~p~~Rps~~~~l~~  112 (135)
                      +|.+||++.+++.+
T Consensus       241 ~p~~Rp~~~~ll~~  254 (256)
T cd05113         241 KAEERPTFQQLLSS  254 (256)
T ss_pred             CcccCCCHHHHHHh
Confidence            99999999999853

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.67  E-value=6.2e-16  Score=102.54  Aligned_cols=91  Identities=21%  Similarity=0.366  Sum_probs=74.3

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||.+...  .++.++|+||+|++++++++ |..||...........+......+....++.++.+++.+|+.
T Consensus       165 ~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  242 (261)
T cd05072         165 KFPIKWTAPEAINFG--SFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMKTCWK  242 (261)
T ss_pred             ccceecCCHHHhccC--CCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcc
Confidence            345679999998764  57889999999999999998 999998777666666655444334455678899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|++||++.++.+
T Consensus       243 ~~p~~Rp~~~~i~~  256 (261)
T cd05072         243 EKAEERPTFDYLQS  256 (261)
T ss_pred             CCcccCcCHHHHHH
Confidence            99999999998764

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.66  E-value=6.5e-16  Score=103.19  Aligned_cols=92  Identities=22%  Similarity=0.393  Sum_probs=76.9

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..++..|+|||.+...  .++.++|+|++|++++++++ |..||.+.+..+....+........+...+..+.+++.+||
T Consensus       181 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  258 (277)
T cd05032         181 GLLPVRWMAPESLKDG--VFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCW  258 (277)
T ss_pred             CCccccccCHHHHhcC--CCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence            4567889999998764  57899999999999999998 88999877766666555555555667778899999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      ..+|.+||++.+++.
T Consensus       259 ~~~p~~Rpt~~~l~~  273 (277)
T cd05032         259 QYNPKMRPTFLEIVS  273 (277)
T ss_pred             CCChhhCCCHHHHHH
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.66  E-value=2.5e-16  Score=105.34  Aligned_cols=114  Identities=29%  Similarity=0.499  Sum_probs=87.7

Q ss_pred             hcccccccccchhhhhc---cCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-------c-------HH-HHHHHHHcCCC
Q 032711           16 KWHVSRWNSLTDQVVNS---KNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-------E-------WV-QALFKIARGEL   77 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~---~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~-------~-------~~-~~~~~i~~~~~   77 (135)
                      .+.+|+..|||||++.-   ....|+.++|.||+|+++|-|++|.+||.+.       +       .+ ..+..|..+.+
T Consensus       244 ~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkY  323 (463)
T KOG0607|consen  244 LTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKY  323 (463)
T ss_pred             cCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCC
Confidence            35689999999998763   2345899999999999999999999999651       1       12 33445666665


Q ss_pred             CCCC----CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCCCCcccc
Q 032711           78 PPIP----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHF  131 (135)
Q Consensus        78 ~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~~~~~~~  131 (135)
                       ..|    ..++.++++++..++..++.+|.++.+++.|||+....++ ..+|.|..+
T Consensus       324 -eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e-kalptp~v~  379 (463)
T KOG0607|consen  324 -EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE-KALPTPQVL  379 (463)
T ss_pred             -cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh-ccCCCCccc
Confidence             233    3467889999999999999999999999999999976554 555555443

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.66  E-value=3.6e-16  Score=104.70  Aligned_cols=97  Identities=30%  Similarity=0.500  Sum_probs=73.5

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--------------------   77 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--------------------   77 (135)
                      ..|+..|+|||++... ..++.++|+||+|++++++++|+.||......+....+.....                    
T Consensus       158 ~~~~~~~~aPE~~~~~-~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd07830         158 YVSTRWYRAPEILLRS-TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFR  236 (283)
T ss_pred             CCCcccccCceeeecC-cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccc
Confidence            4678899999998654 3578899999999999999999999976655444433221000                    


Q ss_pred             -C--------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           78 -P--------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        78 -~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                       .        ......+..+.+++.+|+..+|.+||++++++.|+||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         237 FPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             ccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence             0        0001225778999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.66  E-value=1e-15  Score=101.54  Aligned_cols=91  Identities=23%  Similarity=0.423  Sum_probs=74.9

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||.....  .++.++|+||+|++++++++ |..||.+.+..+....+......+.+...+..+.+++.+|+.
T Consensus       164 ~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  241 (260)
T cd05070         164 KFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWK  241 (260)
T ss_pred             CCCccccChHHHhcC--CCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcc
Confidence            345679999998764  57889999999999999998 889998877666666665554445566778899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++..
T Consensus       242 ~~p~~Rpt~~~l~~  255 (260)
T cd05070         242 KDPEERPTFEYLQS  255 (260)
T ss_pred             cCcccCcCHHHHHH
Confidence            99999999998753

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.66  E-value=1.3e-15  Score=102.51  Aligned_cols=91  Identities=19%  Similarity=0.472  Sum_probs=75.8

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||++...  .++.++|+||+|++++++++ |..||.+....+....+..+.....+...+.++.+++.+|+.
T Consensus       193 ~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  270 (288)
T cd05050         193 AIPIRWMPPESIFYN--RYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWS  270 (288)
T ss_pred             ccChhhcCHHHHhcC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcc
Confidence            345679999998764  68999999999999999997 778888777666666666665555566788999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++++
T Consensus       271 ~~p~~Rpt~~el~~  284 (288)
T cd05050         271 KLPSDRPSFASINR  284 (288)
T ss_pred             cCcccCCCHHHHHH
Confidence            99999999999864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.66  E-value=1.2e-15  Score=101.22  Aligned_cols=91  Identities=20%  Similarity=0.380  Sum_probs=73.2

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||.+...  .++.++|+||+|++++++++ |.+||...+..+....+..+.....+...+..+.+++.+||.
T Consensus       163 ~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  240 (262)
T cd05058         163 KLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWH  240 (262)
T ss_pred             cCCccccChhHhccC--ccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcC
Confidence            456789999998764  68899999999999999999 456676666655555555554445556678899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|++||++.+++.
T Consensus       241 ~~p~~Rp~~~~il~  254 (262)
T cd05058         241 PKPEMRPTFSELVS  254 (262)
T ss_pred             CChhhCCCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.66  E-value=7.6e-16  Score=102.98  Aligned_cols=97  Identities=29%  Similarity=0.477  Sum_probs=73.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC--------------------CC
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG--------------------EL   77 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~--------------------~~   77 (135)
                      ..++..|+|||.+... ..++.++|+|++|++++++++|..||.+....+.+..+...                    ..
T Consensus       158 ~~~~~~~~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (282)
T cd07829         158 EVVTLWYRAPEILLGS-KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTF  236 (282)
T ss_pred             cccCcCcCChHHhcCC-cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccc
Confidence            3456789999998764 36788999999999999999999999876654443332210                    00


Q ss_pred             CC--------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           78 PP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        78 ~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      +.        .....+..+.+++.+||..+|++||++++++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         237 PKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             cccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            00        011236789999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.66  E-value=1.6e-15  Score=98.88  Aligned_cols=97  Identities=33%  Similarity=0.562  Sum_probs=77.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHcCCCCCCCCc--ccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWVQALFKIARGELPPIPDS--VSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~-~~~~~~~~~i~~~~~~~~~~~--~~~~~~~li~   93 (135)
                      ...|+..|++||.....  .++.++|+|++|++++++++|..||.. .+.......+...........  ++.++.+++.
T Consensus       145 ~~~~~~~~~~pE~~~~~--~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  222 (244)
T smart00220      145 TFVGTPEYMAPEVLLGK--GYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIR  222 (244)
T ss_pred             cccCCcCCCCHHHHccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHH
Confidence            45688899999999753  578899999999999999999999977 443444444443333222222  7789999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      +|+..+|.+||++.+++.|+||
T Consensus       223 ~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      223 KLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             HHccCCchhccCHHHHhhCCCC
Confidence            9999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.66  E-value=9.5e-16  Score=105.72  Aligned_cols=103  Identities=25%  Similarity=0.324  Sum_probs=78.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--------------------   77 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--------------------   77 (135)
                      ..++..|++||++.+. ..++.++|+|++|++++++++|..||.+.+.......+.....                    
T Consensus       175 ~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (343)
T cd07880         175 YVVTRWYRAPEVILNW-MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVK  253 (343)
T ss_pred             cccCCcccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHH
Confidence            4678899999999763 3578899999999999999999999987665433332221100                    


Q ss_pred             ----------CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           78 ----------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        78 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                                .......+..+.+++.+|+..+|.+||++.+++.|+||......
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~  307 (343)
T cd07880         254 KLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP  307 (343)
T ss_pred             hccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence                      00113456778999999999999999999999999999976553

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=1.3e-15  Score=101.22  Aligned_cols=95  Identities=42%  Similarity=0.691  Sum_probs=78.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC-CCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE-LPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|+..|+|||.+.+.  .++.++|+|++|++++++++|..||...........+.... ....+..++..+.+++.+|+
T Consensus       169 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l  246 (264)
T cd06653         169 VTGTPYWMSPEVISGE--GYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIF  246 (264)
T ss_pred             cCCcccccCHhhhcCC--CCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHh
Confidence            4688999999999774  57889999999999999999999998776655555544332 24567788899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCC
Q 032711           97 QVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~  115 (135)
                      .. +..||++.+++.|||.
T Consensus       247 ~~-~~~r~~~~~~~~~~~~  264 (264)
T cd06653         247 VE-EKRRPTAEFLLRHPFV  264 (264)
T ss_pred             cC-cccCccHHHHhcCCCC
Confidence            94 6999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.66  E-value=1.1e-15  Score=101.49  Aligned_cols=89  Identities=20%  Similarity=0.356  Sum_probs=75.4

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      +..|+|||.+...  .++.++|+||+|++++++++ |..||.+....+....+.++.....+...+.++.+++.+||..+
T Consensus       161 ~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~  238 (257)
T cd05115         161 PLKWYAPECINFR--KFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYK  238 (257)
T ss_pred             CcccCCHHHHccC--CCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            4679999998764  57889999999999999996 99999887777666666666555566777899999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032711          100 PNDRPTAAQLME  111 (135)
Q Consensus       100 p~~Rps~~~~l~  111 (135)
                      |++||++.++.+
T Consensus       239 ~~~Rp~~~~i~~  250 (257)
T cd05115         239 WEDRPNFAKVEE  250 (257)
T ss_pred             hhhCcCHHHHHH
Confidence            999999998864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.66  E-value=9.3e-16  Score=103.70  Aligned_cols=89  Identities=21%  Similarity=0.410  Sum_probs=74.6

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      +..|+|||++...  .++.++|+||+|+++++|++ |..||.+.........+..+.....+..++..+.+++.+|+..+
T Consensus       181 ~~~y~aPE~~~~~--~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  258 (297)
T cd05089         181 PVRWMAIESLNYS--VYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDR  258 (297)
T ss_pred             CccccCchhhccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            4569999998764  68899999999999999997 99999887776666666655444556678899999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032711          100 PNDRPTAAQLME  111 (135)
Q Consensus       100 p~~Rps~~~~l~  111 (135)
                      |.+||+++++++
T Consensus       259 p~~Rp~~~~i~~  270 (297)
T cd05089         259 PYERPPFAQISV  270 (297)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.66  E-value=7.9e-16  Score=110.92  Aligned_cols=101  Identities=23%  Similarity=0.237  Sum_probs=72.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCC-CCCC--cHHHHHHHHHcCC-----------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRP-YFGV--EWVQALFKIARGE-----------------   76 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p-~~~~--~~~~~~~~i~~~~-----------------   76 (135)
                      ..+||..|+|||++.+.  .++.++||||+|+++|+|++|..+ +...  +....+..+....                 
T Consensus       327 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  404 (501)
T PHA03210        327 GWVGTVATNSPEILAGD--GYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDY  404 (501)
T ss_pred             cccCCcCCCCchhhcCC--CCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHH
Confidence            35799999999999874  689999999999999999998754 3321  2222222221100                 


Q ss_pred             -----CCCC---------CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           77 -----LPPI---------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        77 -----~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                           ....         ...++..+.+++.+||..||.+||++.+++.||||....
T Consensus       405 i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~  461 (501)
T PHA03210        405 IDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEE  461 (501)
T ss_pred             hhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCC
Confidence                 0000         012345677889999999999999999999999998754

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.65  E-value=1.5e-15  Score=101.90  Aligned_cols=92  Identities=26%  Similarity=0.409  Sum_probs=74.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|+..|++||.+...  .++.++|+||+|+++|++++ |..||.+.........+..+.....+...+....+++.+|+
T Consensus       171 ~~~~~~y~~pE~~~~~--~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~  248 (279)
T cd05111         171 HKTPIKWMALESILFG--RYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYMVMVKCW  248 (279)
T ss_pred             CCCcccccCHHHhccC--CcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHHHHHHHHHc
Confidence            4567789999999764  68999999999999999998 99999877665544445555544555567788899999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      ..+|.+||++.+++.
T Consensus       249 ~~~p~~Rps~~el~~  263 (279)
T cd05111         249 MIDENVRPTFKELAN  263 (279)
T ss_pred             CCCcccCcCHHHHHH
Confidence            999999999999865

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.65  E-value=1.1e-15  Score=102.39  Aligned_cols=91  Identities=20%  Similarity=0.373  Sum_probs=74.3

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||++...  .++.++|+||+|++++++++ |+.||...+..+....+..+.....+...+..+.+++.+|+.
T Consensus       180 ~~~~~y~apE~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  257 (280)
T cd05043         180 NRPVKWMALESLVNK--EYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWA  257 (280)
T ss_pred             CcchhccCHHHHhcC--CCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcC
Confidence            456679999999764  58999999999999999998 999998777666555555444334455678899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|++||++.+++.
T Consensus       258 ~~p~~Rps~~~~~~  271 (280)
T cd05043         258 LDPEERPSFSQLVQ  271 (280)
T ss_pred             CChhhCCCHHHHHH
Confidence            99999999998874

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.65  E-value=8.3e-16  Score=102.37  Aligned_cols=90  Identities=26%  Similarity=0.443  Sum_probs=76.1

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|+|||.+...  .++.++|+||+|++++++++ |..||.+....+....+..+.....+...+..+.+++.+||..
T Consensus       177 ~~~~~~~pe~~~~~--~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  254 (273)
T cd05035         177 MPVKWIAIESLADR--VYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRA  254 (273)
T ss_pred             CCccccCHhhcccC--CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCC
Confidence            45679999998654  67899999999999999998 8889987776666666666655566777889999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032711           99 NPNDRPTAAQLME  111 (135)
Q Consensus        99 ~p~~Rps~~~~l~  111 (135)
                      +|.+||++.+++.
T Consensus       255 ~p~~Rp~~~e~~~  267 (273)
T cd05035         255 DPKDRPTFTKLRE  267 (273)
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.65  E-value=1.2e-15  Score=100.98  Aligned_cols=90  Identities=18%  Similarity=0.345  Sum_probs=74.4

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      +..|+|||.+...  .++.++|+||+|+++|++++ |..||......+....+........+...+.++.+++.+||..+
T Consensus       164 ~~~y~~Pe~~~~~--~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  241 (256)
T cd05059         164 PVKWAPPEVFDYS--RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEK  241 (256)
T ss_pred             CccccCHHHhccC--CCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCC
Confidence            3579999999864  68899999999999999998 78999877666666666554434455668899999999999999


Q ss_pred             CCCCCCHHHHhhC
Q 032711          100 PNDRPTAAQLMEH  112 (135)
Q Consensus       100 p~~Rps~~~~l~~  112 (135)
                      |++||++.++++.
T Consensus       242 p~~Rpt~~~~l~~  254 (256)
T cd05059         242 PEDRPAFKKLLSQ  254 (256)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.65  E-value=1.4e-15  Score=101.19  Aligned_cols=91  Identities=20%  Similarity=0.403  Sum_probs=74.5

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||.+...  .++.++|+|++|++++++++ |..||...+..+....+........+...+..+.+++.+||.
T Consensus       174 ~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  251 (269)
T cd05044         174 LLPVRWMAPESLLDG--KFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWA  251 (269)
T ss_pred             CCCccccCHHHHccC--CcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcccchHHHHHHHHHHcC
Confidence            446789999999764  68999999999999999998 999998776666555555444445566778899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++++
T Consensus       252 ~~p~~Rp~~~~i~~  265 (269)
T cd05044         252 QDPSERPTFDRIQE  265 (269)
T ss_pred             CCcccCCCHHHHHH
Confidence            99999999998864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.65  E-value=8.2e-16  Score=103.21  Aligned_cols=112  Identities=28%  Similarity=0.374  Sum_probs=88.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-------------------   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-------------------   77 (135)
                      +.++|.+|.|||++.+. ..|+..+|+||+||++.||+++++.|.+....+++.+|-.-..                   
T Consensus       179 ~evvTlWYRaPEvLlGs-~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~  257 (323)
T KOG0594|consen  179 PEVVTLWYRAPEVLLGS-TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAP  257 (323)
T ss_pred             ccEEEeeccCHHHhcCC-CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcccccccccc
Confidence            45889999999999986 4689999999999999999999999999988887777643110                   


Q ss_pred             -CCC--C-------CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCCCCcc
Q 032711           78 -PPI--P-------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPH  129 (135)
Q Consensus        78 -~~~--~-------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~~~~~  129 (135)
                       +..  +       ........+++.+|+..+|.+|.++..++.|+||.........+....
T Consensus       258 f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~~~~~~~~  319 (323)
T KOG0594|consen  258 FPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKSSQLLLQA  319 (323)
T ss_pred             CcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccchhhhhccc
Confidence             000  0       112247899999999999999999999999999998766555554443

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.65  E-value=8.3e-16  Score=103.51  Aligned_cols=97  Identities=29%  Similarity=0.395  Sum_probs=71.1

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH-HHHHHHHcC----------------CC---
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV-QALFKIARG----------------EL---   77 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~-~~~~~i~~~----------------~~---   77 (135)
                      ..++..|+|||++.+. ..++.++|+||+|++++++++|..||.+.... +.+..+...                ..   
T Consensus       163 ~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (291)
T cd07870         163 EVVTLWYRPPDVLLGA-TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPE  241 (291)
T ss_pred             ccccccccCCceeecC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccch
Confidence            3578899999998753 25788999999999999999999999765432 222221100                00   


Q ss_pred             --C---C-----C--CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           78 --P---P-----I--PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        78 --~---~-----~--~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                        .   .     .  ....+..+.+++.+|+..+|.+||++.+++.||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         242 WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence              0   0     0  01125678899999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.65  E-value=1.3e-15  Score=102.58  Aligned_cols=96  Identities=30%  Similarity=0.463  Sum_probs=70.3

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHcCC---------------------
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WVQALFKIARGE---------------------   76 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~-~~~~~~~i~~~~---------------------   76 (135)
                      .++..|+|||++.+. ..++.++|+||+|+++++|++|..||.+.. ..+....+....                     
T Consensus       164 ~~~~~~~aPE~~~~~-~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (291)
T cd07844         164 VVTLWYRPPDVLLGS-TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYS  242 (291)
T ss_pred             ccccccCCcHHhhcC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccc
Confidence            467889999998754 357889999999999999999999996654 222222111000                     


Q ss_pred             C---CC-----CCCccc--HHHHHHHHHhcccCCCCCCCHHHHhhCcCC
Q 032711           77 L---PP-----IPDSVS--RDARDFILKCLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        77 ~---~~-----~~~~~~--~~~~~li~~~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      .   ..     ....+.  .++.+++.+||..+|++||++.+++.|+||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         243 FPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             ccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            0   00     001223  778899999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.65  E-value=1.9e-15  Score=100.26  Aligned_cols=91  Identities=21%  Similarity=0.388  Sum_probs=74.6

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||.....  .++.++|+||+|++++++++ |..||.+....+....+......+.+...+..+.+++.+||.
T Consensus       164 ~~~~~y~~Pe~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  241 (260)
T cd05069         164 KFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWK  241 (260)
T ss_pred             ccchhhCCHHHhccC--CcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcc
Confidence            345679999988764  57899999999999999998 889998877666666655544344556788999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++++
T Consensus       242 ~~p~~Rp~~~~i~~  255 (260)
T cd05069         242 KDPDERPTFEYIQS  255 (260)
T ss_pred             CCcccCcCHHHHHH
Confidence            99999999998864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.65  E-value=1.5e-15  Score=100.69  Aligned_cols=91  Identities=23%  Similarity=0.426  Sum_probs=75.3

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||++...  .++.++|+||+|++++++++ |+.||.+.+..+....+......+.+...+.++.+++.+|+.
T Consensus       164 ~~~~~y~~pe~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  241 (260)
T cd05067         164 KFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMRLCWK  241 (260)
T ss_pred             cccccccCHHHhccC--CcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcc
Confidence            456789999998764  57889999999999999998 999998777666665555554445566778899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|++||+++++..
T Consensus       242 ~~p~~Rp~~~~l~~  255 (260)
T cd05067         242 EKPEERPTFEYLRS  255 (260)
T ss_pred             CChhhCCCHHHHHH
Confidence            99999999998864

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.65  E-value=6.8e-17  Score=118.68  Aligned_cols=104  Identities=30%  Similarity=0.551  Sum_probs=91.0

Q ss_pred             hhhhcccccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC--CCCcccHH
Q 032711           13 LRRKWHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP--IPDSVSRD   87 (135)
Q Consensus        13 ~~~~~~~gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~--~~~~~~~~   87 (135)
                      .+..+.+||+.|||||++...   ...|+..+|+||+|+...||..|.+|+.+......++.|.+.+.+.  .|...+.+
T Consensus       178 grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~  257 (953)
T KOG0587|consen  178 GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKK  257 (953)
T ss_pred             ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHH
Confidence            344578999999999999854   2347888999999999999999999999999988998888776643  35677899


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhhCcCCC
Q 032711           88 ARDFILKCLQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        88 ~~~li~~~l~~~p~~Rps~~~~l~~~~~~  116 (135)
                      +.+||..||..|-.+||+..++++|||+.
T Consensus       258 FndFIs~cL~Kd~e~RP~~~~ll~hpFi~  286 (953)
T KOG0587|consen  258 FNDFISTCLVKDYEQRPSTEELLKHPFIT  286 (953)
T ss_pred             HHHHHHHHHhhccccCcchhhhccCCccc
Confidence            99999999999999999999999999998

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.65  E-value=1.7e-15  Score=100.98  Aligned_cols=91  Identities=24%  Similarity=0.366  Sum_probs=75.6

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|++||.....  .++.++|+||+|++++++++ |..||.+.........+..+.....+...+..+.+++.+||.
T Consensus       175 ~~~~~~~~pe~~~~~--~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  252 (272)
T cd05075         175 KMPVKWIAIESLADR--VYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWL  252 (272)
T ss_pred             cCCcccCCHHHccCC--CcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            356689999998764  68999999999999999998 788998776666666666555445566778899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++++
T Consensus       253 ~~p~~Rps~~~l~~  266 (272)
T cd05075         253 LNPKDRPSFETLRC  266 (272)
T ss_pred             CCcccCcCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.64  E-value=1.7e-15  Score=100.19  Aligned_cols=90  Identities=21%  Similarity=0.340  Sum_probs=73.5

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|+|||.+...  .++.++|+|++|+++|++++ |..||...........+..+.....+...+..+.+++.+||..
T Consensus       163 ~~~~~~aPe~~~~~--~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~  240 (256)
T cd05112         163 FPVKWSSPEVFSFS--KYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWKE  240 (256)
T ss_pred             cchhhcCHhHhccC--CcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccc
Confidence            45689999999764  68889999999999999998 8899987776666665554433334555788999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032711           99 NPNDRPTAAQLME  111 (135)
Q Consensus        99 ~p~~Rps~~~~l~  111 (135)
                      +|.+||++.++++
T Consensus       241 ~p~~Rp~~~~~l~  253 (256)
T cd05112         241 RPEDRPSFSLLLH  253 (256)
T ss_pred             ChhhCCCHHHHHH
Confidence            9999999999876

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.64  E-value=1.9e-15  Score=100.01  Aligned_cols=91  Identities=20%  Similarity=0.357  Sum_probs=75.2

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||++...  .++.++|+|++|++++++++ |+.||...+.......+..+.....+...+..+.+++.+|+.
T Consensus       160 ~~~~~y~aPE~~~~~--~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  237 (256)
T cd05082         160 KLPVKWTAPEALREK--KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWH  237 (256)
T ss_pred             ccceeecCHHHHccC--CCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhc
Confidence            345679999998764  68889999999999999997 899998777666666665554445566788999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|++||++.++++
T Consensus       238 ~~p~~Rpt~~~l~~  251 (256)
T cd05082         238 LDAATRPSFLQLRE  251 (256)
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.64  E-value=2e-15  Score=100.48  Aligned_cols=89  Identities=19%  Similarity=0.409  Sum_probs=72.9

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      +..|+|||++...  .++.++|+|++|+++|++++ |..||...+..+....+......+.+...+..+.+++.+|+..+
T Consensus       173 ~~~y~~PE~~~~~--~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~  250 (268)
T cd05063         173 PIRWTAPEAIAYR--KFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQD  250 (268)
T ss_pred             CceecCHHHhhcC--CcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            3469999999764  57899999999999999987 99999777666666666554444445567889999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032711          100 PNDRPTAAQLME  111 (135)
Q Consensus       100 p~~Rps~~~~l~  111 (135)
                      |.+||++.++++
T Consensus       251 p~~Rp~~~~i~~  262 (268)
T cd05063         251 RARRPRFVDIVN  262 (268)
T ss_pred             cccCcCHHHHHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.64  E-value=2.3e-15  Score=100.18  Aligned_cols=93  Identities=27%  Similarity=0.503  Sum_probs=76.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCC-cccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPD-SVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~li~~~   95 (135)
                      ...|+..|++||.+...  .++.++|+||+|+++|++++|+.||...+.......+......+.+. ..+..+.+++.+|
T Consensus       172 ~~~~~~~~~~Pe~~~~~--~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  249 (269)
T cd08528         172 SVVGTILYSCPEIVKNE--PYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSC  249 (269)
T ss_pred             cccCcccCcChhhhcCC--CCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHH
Confidence            45688899999999764  58999999999999999999999998777666555555544433333 5678999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032711           96 LQVNPNDRPTAAQLME  111 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~  111 (135)
                      |..+|++||++.++..
T Consensus       250 l~~~p~~Rp~~~e~~~  265 (269)
T cd08528         250 LTPDAEARPDIIQVSA  265 (269)
T ss_pred             CCCCCccCCCHHHHHH
Confidence            9999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.64  E-value=2e-15  Score=100.02  Aligned_cols=91  Identities=24%  Similarity=0.448  Sum_probs=75.0

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|++||++...  .++.++|+|++|++++++++ |..||...+..+.+..+......+.+...+..+.+++.+||.
T Consensus       165 ~~~~~~~~PE~~~~~--~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  242 (261)
T cd05148         165 KIPYKWTAPEAASHG--TFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLECWA  242 (261)
T ss_pred             CCceEecCHHHHccC--CCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcC
Confidence            345679999998764  67889999999999999998 889998777666666665544445567788999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++.+
T Consensus       243 ~~p~~Rpt~~~l~~  256 (261)
T cd05148         243 AEPEDRPSFKALRE  256 (261)
T ss_pred             CCchhCcCHHHHHH
Confidence            99999999998864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.64  E-value=6.8e-16  Score=106.25  Aligned_cols=101  Identities=23%  Similarity=0.307  Sum_probs=87.4

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      .++||++.|-.||.+.+. ..-++.+|.|++|+++|.+..|..||.+.+....+.+|.++.+.  ....+.++.-||++|
T Consensus       210 qTFCGSPLYASPEIvNG~-PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYr--EP~~PSdA~gLIRwm  286 (668)
T KOG0611|consen  210 QTFCGSPLYASPEIVNGT-PYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYR--EPETPSDASGLIRWM  286 (668)
T ss_pred             HHhcCCcccCCccccCCC-CCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccccc--CCCCCchHHHHHHHH
Confidence            468999999999999886 23378899999999999999999999999988888889888773  233556788999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      |..+|+.|.+++++-.|=|++...
T Consensus       287 LmVNP~RRATieDiAsHWWvNwgy  310 (668)
T KOG0611|consen  287 LMVNPERRATIEDIASHWWVNWGY  310 (668)
T ss_pred             HhcCcccchhHHHHhhhheeeccc
Confidence            999999999999999998887543

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.64  E-value=1.9e-15  Score=100.58  Aligned_cols=91  Identities=21%  Similarity=0.422  Sum_probs=75.0

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|+|||.+...  .++.++|+|++|++++++++ |..||...........+......+.+...+..+.+++.+|+..
T Consensus       170 ~~~~y~~Pe~~~~~--~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  247 (266)
T cd05033         170 IPIRWTAPEAIAYR--KFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQK  247 (266)
T ss_pred             CCccccChhhhccC--CCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCC
Confidence            45679999998764  68899999999999999987 9999977776666666655444455667789999999999999


Q ss_pred             CCCCCCCHHHHhhC
Q 032711           99 NPNDRPTAAQLMEH  112 (135)
Q Consensus        99 ~p~~Rps~~~~l~~  112 (135)
                      +|++||++++++++
T Consensus       248 ~p~~Rp~~~ei~~~  261 (266)
T cd05033         248 DRNERPTFSQIVST  261 (266)
T ss_pred             CcccCcCHHHHHHH
Confidence            99999999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.63  E-value=3.1e-15  Score=98.97  Aligned_cols=92  Identities=30%  Similarity=0.516  Sum_probs=74.3

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHc-CCCCCCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIAR-GELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ..++..|++||.+...  .++.++|+||+|+++++|++ |..||...+..+....+.. ......+...+..+.+++.+|
T Consensus       160 ~~~~~~y~~pE~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  237 (257)
T cd05040         160 LKVPFAWCAPESLRTR--TFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQC  237 (257)
T ss_pred             CCCCceecCHHHhccc--CcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHH
Confidence            4567889999998764  58899999999999999998 9999987766665555443 222334556788999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032711           96 LQVNPNDRPTAAQLME  111 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~  111 (135)
                      +..+|.+||++.+++.
T Consensus       238 l~~~p~~Rps~~~~~~  253 (257)
T cd05040         238 WAHNPADRPTFAALRE  253 (257)
T ss_pred             CCCCcccCCCHHHHHH
Confidence            9999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.63  E-value=3.4e-15  Score=98.38  Aligned_cols=90  Identities=22%  Similarity=0.401  Sum_probs=73.6

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|+|||++...  .++.++|+||+|++++++++ |..||...........+........+...+..+.+++.+|+..
T Consensus       156 ~~~~y~aPE~~~~~--~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  233 (250)
T cd05085         156 IPIKWTAPEALNYG--RYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDY  233 (250)
T ss_pred             CcccccCHHHhccC--CCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccc
Confidence            35679999999764  67889999999999999998 8889987766555555554443445566789999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032711           99 NPNDRPTAAQLME  111 (135)
Q Consensus        99 ~p~~Rps~~~~l~  111 (135)
                      +|.+||++.++.+
T Consensus       234 ~p~~Rp~~~~l~~  246 (250)
T cd05085         234 KPENRPKFSELQK  246 (250)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.63  E-value=2.5e-15  Score=101.02  Aligned_cols=102  Identities=28%  Similarity=0.488  Sum_probs=77.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHcCCCCCCCCcccHHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW----VQALFKIARGELPPIPDSVSRDARDFIL   93 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~li~   93 (135)
                      ..|+..|++||.+.......+.++|+|++|++++++++|..||...+.    .+....+.... .+.+..++..+.+++.
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~  244 (288)
T cd05583         166 FCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK-PPFPKTMSAEARDFIQ  244 (288)
T ss_pred             ccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC-CCCCcccCHHHHHHHH
Confidence            468889999999876422368899999999999999999999864321    12222233222 3556668889999999


Q ss_pred             HhcccCCCCCCCH---HHHhhCcCCCCCCC
Q 032711           94 KCLQVNPNDRPTA---AQLMEHPFVKRPLP  120 (135)
Q Consensus        94 ~~l~~~p~~Rps~---~~~l~~~~~~~~~~  120 (135)
                      +||..+|++||++   .+++.|+||+....
T Consensus       245 ~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~  274 (288)
T cd05583         245 KLLEKDPKKRLGANGADEIKNHPFFQGIDW  274 (288)
T ss_pred             HHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence            9999999999984   56799999987654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.63  E-value=3.1e-15  Score=99.44  Aligned_cols=91  Identities=23%  Similarity=0.385  Sum_probs=73.4

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|++||+....  .++.++|+|++|++++++++ |..||.+.........+......+.+...+..+.+++.+|+.
T Consensus       164 ~~~~~y~~PE~~~~~--~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  241 (262)
T cd05071         164 KFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWR  241 (262)
T ss_pred             cccceecCHhHhccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHHHcc
Confidence            355679999988764  68999999999999999999 888888776666555554443334455678899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.+++.
T Consensus       242 ~~p~~Rp~~~~~~~  255 (262)
T cd05071         242 KEPEERPTFEYLQA  255 (262)
T ss_pred             CCcccCCCHHHHHH
Confidence            99999999998764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.63  E-value=1.8e-15  Score=104.14  Aligned_cols=93  Identities=25%  Similarity=0.475  Sum_probs=72.1

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHH-HHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQAL-FKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ..++..|+|||++.+.  .++.++|+||+|++++++++ |..||.+....+.+ ..+........+.....++.+++.+|
T Consensus       235 ~~~~~~y~aPE~~~~~--~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c  312 (337)
T cd05054         235 ARLPLKWMAPESIFDK--VYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDC  312 (337)
T ss_pred             CCCCccccCcHHhcCC--CCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHH
Confidence            3556789999999774  68999999999999999997 99998764432332 23333333344556778999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032711           96 LQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~  112 (135)
                      |+.+|.+||++.++++|
T Consensus       313 l~~~p~~RPs~~ell~~  329 (337)
T cd05054         313 WHNNPEDRPTFSELVEI  329 (337)
T ss_pred             ccCChhhCcCHHHHHHH
Confidence            99999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.63  E-value=7e-16  Score=105.90  Aligned_cols=101  Identities=24%  Similarity=0.414  Sum_probs=77.8

Q ss_pred             ccccccccchhhhhccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-CCCC---CcccHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKN---GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIP---DSVSRDARD   90 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~---~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-~~~~---~~~~~~~~~   90 (135)
                      .+||+.|+|||++....   ..++.++|+||+|+++|+|++|+.||...+..+....+..... .+.+   ..++.++.+
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~  242 (331)
T cd05624         163 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKD  242 (331)
T ss_pred             ccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHH
Confidence            57999999999987521   2467899999999999999999999988777666666554321 1222   346789999


Q ss_pred             HHHHhcccCCCC--CCCHHHHhhCcCCCCC
Q 032711           91 FILKCLQVNPND--RPTAAQLMEHPFVKRP  118 (135)
Q Consensus        91 li~~~l~~~p~~--Rps~~~~l~~~~~~~~  118 (135)
                      ++.+|+..++.+  |+++++++.|+||...
T Consensus       243 li~~ll~~~~~~~~~~~~~~~~~h~~f~~~  272 (331)
T cd05624         243 LIQRLICSRERRLGQNGIEDFKKHAFFEGI  272 (331)
T ss_pred             HHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence            999999865543  4689999999999763

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.63  E-value=1.7e-15  Score=105.71  Aligned_cols=90  Identities=20%  Similarity=0.403  Sum_probs=70.6

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCC-CCCCCCcccHHHHHHHHHhcc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGE-LPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~li~~~l~   97 (135)
                      ++..|+|||++...  .++.++|+||+|+++++|++ |+.||...........+.... ....+...+.++.+++.+||+
T Consensus       276 ~~~~y~aPE~~~~~--~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  353 (374)
T cd05106         276 LPVKWMAPESIFDC--VYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWN  353 (374)
T ss_pred             CccceeCHHHhcCC--CCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcC
Confidence            45679999999764  68999999999999999997 999997755443333333322 233455568999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++.+
T Consensus       354 ~dp~~RPs~~~l~~  367 (374)
T cd05106         354 LEPTERPTFSQISQ  367 (374)
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999998864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.63  E-value=3e-15  Score=100.23  Aligned_cols=90  Identities=23%  Similarity=0.430  Sum_probs=73.4

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|++||.....  .++.++|+||+|+++|++++ |..||...........+..+...+.+...+..+.+++.+||..
T Consensus       173 ~~~~y~~PE~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  250 (279)
T cd05109         173 VPIKWMALESILHR--RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMI  250 (279)
T ss_pred             cchhhCCHHHhccC--CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCC
Confidence            35679999999764  68999999999999999988 8889877665555544555444455667889999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032711           99 NPNDRPTAAQLME  111 (135)
Q Consensus        99 ~p~~Rps~~~~l~  111 (135)
                      +|.+||++.+++.
T Consensus       251 dp~~Rp~~~~l~~  263 (279)
T cd05109         251 DSECRPRFRELVD  263 (279)
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.63  E-value=1.3e-15  Score=102.59  Aligned_cols=91  Identities=22%  Similarity=0.399  Sum_probs=74.7

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|+|||++...  .++.++|+||+|+++|++++ |..||.+....+....+........+...+..+.+++.+|+..
T Consensus       196 ~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  273 (293)
T cd05053         196 LPVKWMAPEALFDR--VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHE  273 (293)
T ss_pred             CCccccCHHHhccC--CcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccc
Confidence            45679999998764  68899999999999999987 8899987776665555555544455667788999999999999


Q ss_pred             CCCCCCCHHHHhhC
Q 032711           99 NPNDRPTAAQLMEH  112 (135)
Q Consensus        99 ~p~~Rps~~~~l~~  112 (135)
                      +|.+||++.+++.+
T Consensus       274 ~p~~Rps~~eil~~  287 (293)
T cd05053         274 VPSQRPTFKQLVED  287 (293)
T ss_pred             CcccCcCHHHHHHH
Confidence            99999999998863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.63  E-value=2.6e-15  Score=100.16  Aligned_cols=89  Identities=22%  Similarity=0.425  Sum_probs=72.8

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      +..|+|||++...  .++.++|+||+|++++++++ |..||.+.+..+....+........+...+.++.+++.+|+..+
T Consensus       174 ~~~y~apE~~~~~--~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  251 (270)
T cd05047         174 PVRWMAIESLNYS--VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREK  251 (270)
T ss_pred             ccccCChHHHccC--CCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccC
Confidence            4579999998764  68899999999999999997 99999877666666555544333455567788999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032711          100 PNDRPTAAQLME  111 (135)
Q Consensus       100 p~~Rps~~~~l~  111 (135)
                      |.+||++.+++.
T Consensus       252 p~~Rps~~~il~  263 (270)
T cd05047         252 PYERPSFAQILV  263 (270)
T ss_pred             hhhCCCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.63  E-value=3.4e-15  Score=99.51  Aligned_cols=90  Identities=22%  Similarity=0.474  Sum_probs=76.0

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|+|||.+...  .++.++|+||+|++++++++ |..||......+....+..+.....+...+..+.+++.+|+..
T Consensus       170 ~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  247 (270)
T cd05056         170 LPIKWMAPESINFR--RFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAY  247 (270)
T ss_pred             ccccccChhhhccC--CCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCC
Confidence            34579999998764  58899999999999999886 9999988777766666666655566777889999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032711           99 NPNDRPTAAQLME  111 (135)
Q Consensus        99 ~p~~Rps~~~~l~  111 (135)
                      +|.+||++.+++.
T Consensus       248 ~P~~Rpt~~~~~~  260 (270)
T cd05056         248 DPSKRPRFTELKA  260 (270)
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999998865

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.63  E-value=3.4e-15  Score=101.68  Aligned_cols=89  Identities=22%  Similarity=0.411  Sum_probs=73.4

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      +..|+|||++.+.  .++.++|+|++|+++|++++ |..||.+....+....+..+.....+...+.++.+++.+|+..+
T Consensus       199 ~~~y~aPE~~~~~--~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  276 (314)
T cd05099         199 PVKWMAPEALFDR--VYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAV  276 (314)
T ss_pred             CccccCHHHHccC--CcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            4579999999764  68899999999999999998 88899877766666655555444456677889999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032711          100 PNDRPTAAQLME  111 (135)
Q Consensus       100 p~~Rps~~~~l~  111 (135)
                      |.+||++.+++.
T Consensus       277 p~~Rps~~~ll~  288 (314)
T cd05099         277 PTQRPTFKQLVE  288 (314)
T ss_pred             cccCcCHHHHHH
Confidence            999999988764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.63  E-value=2.5e-15  Score=101.11  Aligned_cols=103  Identities=25%  Similarity=0.416  Sum_probs=79.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHcCCCCCCCCcccHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW----VQALFKIARGELPPIPDSVSRDARDFI   92 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~li   92 (135)
                      ...|+..|+|||.+......++.++|+|++|++++++++|..||...+.    ......+.. ...+.+..++..+.+++
T Consensus       165 ~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll  243 (290)
T cd05613         165 SFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK-SEPPYPQEMSALAKDII  243 (290)
T ss_pred             cccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc-cCCCCCccCCHHHHHHH
Confidence            3568899999999876433567889999999999999999999864322    222222222 22345666888999999


Q ss_pred             HHhcccCCCCCC-----CHHHHhhCcCCCCCCC
Q 032711           93 LKCLQVNPNDRP-----TAAQLMEHPFVKRPLP  120 (135)
Q Consensus        93 ~~~l~~~p~~Rp-----s~~~~l~~~~~~~~~~  120 (135)
                      .+|+..+|.+|+     ++++++.|+||.....
T Consensus       244 ~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~  276 (290)
T cd05613         244 QRLLMKDPKKRLGCGPSDADEIKKHPFFQKINW  276 (290)
T ss_pred             HHHhcCCHHHhcCCCCCCHHHHHcCcccccCCH
Confidence            999999999997     8899999999998663

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.63  E-value=4.4e-15  Score=100.01  Aligned_cols=91  Identities=22%  Similarity=0.389  Sum_probs=74.2

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||.+.+.  .++.++|+||+|++++++++ |..||.+.........+........+..++.++.+++.+|+.
T Consensus       190 ~~~~~y~apE~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~  267 (290)
T cd05045         190 RIPVKWMAIESLFDH--IYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWK  267 (290)
T ss_pred             CCCccccCHHHHccC--CcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcc
Confidence            456789999998764  58899999999999999998 999998776665555544443344566788999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.+++.
T Consensus       268 ~~P~~Rp~~~~i~~  281 (290)
T cd05045         268 QEPDKRPTFADISK  281 (290)
T ss_pred             CCcccCCCHHHHHH
Confidence            99999999998864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.62  E-value=3.5e-15  Score=98.40  Aligned_cols=89  Identities=22%  Similarity=0.430  Sum_probs=72.9

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      +..|+|||.+...  .++.++|+|++|++++++++ |..||...........+........+...+..+.+++.+|+..+
T Consensus       158 ~~~y~~PE~~~~~--~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  235 (251)
T cd05041         158 PIKWTAPEALNYG--RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYD  235 (251)
T ss_pred             eeccCChHhhccC--CCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccC
Confidence            4569999998764  68899999999999999998 88888777665555555444334456677899999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032711          100 PNDRPTAAQLME  111 (135)
Q Consensus       100 p~~Rps~~~~l~  111 (135)
                      |.+||+++++++
T Consensus       236 p~~Rp~~~ell~  247 (251)
T cd05041         236 PENRPSFSEIYN  247 (251)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.62  E-value=3e-15  Score=98.78  Aligned_cols=89  Identities=20%  Similarity=0.388  Sum_probs=71.6

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      +..|+|||.+...  .++.++|+|++|++++++++ |..||...........+........+...+..+.+++.+|+..+
T Consensus       159 ~~~y~aPE~~~~~--~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  236 (252)
T cd05084         159 PVKWTAPEALNYG--RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYD  236 (252)
T ss_pred             ceeecCchhhcCC--CCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCC
Confidence            3469999998764  58899999999999999997 88888766655554444444344556677889999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032711          100 PNDRPTAAQLME  111 (135)
Q Consensus       100 p~~Rps~~~~l~  111 (135)
                      |.+||++.++++
T Consensus       237 p~~Rps~~~~~~  248 (252)
T cd05084         237 PGQRPSFSTVHQ  248 (252)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.62  E-value=2.6e-15  Score=102.37  Aligned_cols=91  Identities=24%  Similarity=0.435  Sum_probs=73.1

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|+|||++...  .++.++|+||+|+++|++++ |..||.+....+....+......+.+...+..+.+++.+||..
T Consensus       173 ~~~~y~apE~~~~~--~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  250 (316)
T cd05108         173 VPIKWMALESILHR--IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMI  250 (316)
T ss_pred             cceeecChHHhccC--CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccC
Confidence            35679999999764  68999999999999999987 9999987665554443444444455566788999999999999


Q ss_pred             CCCCCCCHHHHhhC
Q 032711           99 NPNDRPTAAQLMEH  112 (135)
Q Consensus        99 ~p~~Rps~~~~l~~  112 (135)
                      +|.+||++.+++.+
T Consensus       251 ~p~~Rps~~~l~~~  264 (316)
T cd05108         251 DADSRPKFRELIIE  264 (316)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999988764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.62  E-value=3.9e-15  Score=98.79  Aligned_cols=88  Identities=25%  Similarity=0.480  Sum_probs=72.8

Q ss_pred             ccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccCC
Q 032711           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP  100 (135)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p  100 (135)
                      ..|+|||.+...  .++.++|+||+|++++++++ |..||.+.........+......+.+...+..+.+++.+|+..+|
T Consensus       168 ~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  245 (261)
T cd05068         168 IKWTAPEAALYN--RFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDP  245 (261)
T ss_pred             eeccCccccccC--CCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCc
Confidence            479999998764  68899999999999999998 999998877666666655443334556678999999999999999


Q ss_pred             CCCCCHHHHhh
Q 032711          101 NDRPTAAQLME  111 (135)
Q Consensus       101 ~~Rps~~~~l~  111 (135)
                      .+||++.++..
T Consensus       246 ~~Rp~~~~l~~  256 (261)
T cd05068         246 DDRPTFETLQW  256 (261)
T ss_pred             ccCCCHHHHHH
Confidence            99999998864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.62  E-value=3.8e-15  Score=102.19  Aligned_cols=106  Identities=25%  Similarity=0.343  Sum_probs=77.9

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc-----------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR-----------------------   74 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~-----------------------   74 (135)
                      ..++..|+|||.+... ..++.++|+|++|++++++++|..||...........+..                       
T Consensus       165 ~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (328)
T cd07856         165 YVSTRYYRAPEIMLTW-QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQ  243 (328)
T ss_pred             CcccccccCceeeecc-CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHh
Confidence            4678889999987653 3578999999999999999999999976554222111110                       


Q ss_pred             -CC-CCCC-----CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCC
Q 032711           75 -GE-LPPI-----PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWG  124 (135)
Q Consensus        75 -~~-~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~  124 (135)
                       .. ....     ....+..+.+++.+||..+|++||++++++.|+|+.....+...
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~  300 (328)
T cd07856         244 SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDE  300 (328)
T ss_pred             hccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCccc
Confidence             00 0001     12356789999999999999999999999999999876655443

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.62  E-value=3.7e-15  Score=101.23  Aligned_cols=90  Identities=23%  Similarity=0.397  Sum_probs=72.7

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|+|||++.+.  .++.++|+||+|+++|+|++ |..||.+....+....+........+...+.++.+++.+|+..
T Consensus       204 ~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  281 (307)
T cd05098         204 LPVKWMAPEALFDR--IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHA  281 (307)
T ss_pred             CccceeChHHhccC--CCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHccc
Confidence            34679999999764  57899999999999999998 8888877665555544444443455667788999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032711           99 NPNDRPTAAQLME  111 (135)
Q Consensus        99 ~p~~Rps~~~~l~  111 (135)
                      +|.+||++.+++.
T Consensus       282 ~p~~Rps~~evl~  294 (307)
T cd05098         282 VPSQRPTFKQLVE  294 (307)
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.62  E-value=5e-15  Score=98.45  Aligned_cols=93  Identities=26%  Similarity=0.589  Sum_probs=72.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHHHcCCCCCCC-CcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--VQALFKIARGELPPIP-DSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~--~~~~~~i~~~~~~~~~-~~~~~~~~~li~   93 (135)
                      ...|+..|+|||.+...  .++.++|+|++|++++++++|..||.....  ......+.....++.+ ...+..+.+++.
T Consensus       165 ~~~~~~~~~aPE~~~~~--~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  242 (267)
T cd08228         165 SLVGTPYYMSPERIHEN--GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVS  242 (267)
T ss_pred             cCCCCccccChhhhccC--CCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHH
Confidence            45788899999999764  578899999999999999999999865432  3333444433333333 356788999999


Q ss_pred             HhcccCCCCCCCHHHHhh
Q 032711           94 KCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~  111 (135)
                      +||..+|.+||++.++++
T Consensus       243 ~cl~~~p~~Rp~~~~vl~  260 (267)
T cd08228         243 MCIYPDPDQRPDIGYVHQ  260 (267)
T ss_pred             HHCCCCcccCcCHHHHHH
Confidence            999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.62  E-value=1.3e-15  Score=100.00  Aligned_cols=91  Identities=26%  Similarity=0.304  Sum_probs=69.9

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      ..++..|+|||.+...  .++.++|+|++|++++++++|..++......     +........+...+..+.+++.+|++
T Consensus       142 ~~~~~~y~aPE~~~~~--~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~~~l~  214 (237)
T cd05576         142 EAVENMYCAPEVGGIS--EETEACDWWSLGAILFELLTGKTLVECHPSG-----INTHTTLNIPEWVSEEARSLLQQLLQ  214 (237)
T ss_pred             CCcCccccCCcccCCC--CCCchhhHHHHHHHHHHHHHCcchhhcCchh-----cccccccCCcccCCHHHHHHHHHHcc
Confidence            3456779999988653  5788999999999999999998776432211     11111123455678899999999999


Q ss_pred             cCCCCCCCH-----HHHhhCcCC
Q 032711           98 VNPNDRPTA-----AQLMEHPFV  115 (135)
Q Consensus        98 ~~p~~Rps~-----~~~l~~~~~  115 (135)
                      .||.+|+++     ++++.||||
T Consensus       215 ~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         215 FNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             CCHHHhcCCCccchHHHHcCCCC
Confidence            999999985     899999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.62  E-value=3.1e-15  Score=99.20  Aligned_cols=92  Identities=18%  Similarity=0.366  Sum_probs=69.9

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCC-CCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~-~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|+..|+|||++... ..++.++|+||+|+++|++++|. .|+...+......... . ....+.....++.+++.+||
T Consensus       164 ~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~li~~~l  240 (258)
T cd05078         164 LLERIPWVPPECIENP-QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYE-D-RHQLPAPKWTELANLINQCM  240 (258)
T ss_pred             ccccCCccCchhccCC-CCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHH-c-cccCCCCCcHHHHHHHHHHh
Confidence            5678899999999763 35788999999999999999985 5655544433332221 1 22445556688999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      +.+|++||+++++++.
T Consensus       241 ~~~p~~Rps~~~il~~  256 (258)
T cd05078         241 DYEPDFRPSFRAIIRD  256 (258)
T ss_pred             ccChhhCCCHHHHHHh
Confidence            9999999999998863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.62  E-value=7.3e-15  Score=97.37  Aligned_cols=90  Identities=26%  Similarity=0.460  Sum_probs=74.6

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|+|||.+.+.  .++.++|+||+|++++++++ |+.||.+.........+......+.+...+..+.+++.+|+..
T Consensus       166 ~~~~y~~PE~~~~~--~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  243 (261)
T cd05034         166 FPIKWTAPEAANYG--RFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQCWDK  243 (261)
T ss_pred             CCccccCHHHhccC--CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccc
Confidence            34679999999764  57899999999999999998 9999988776666666655544455566788999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032711           99 NPNDRPTAAQLME  111 (135)
Q Consensus        99 ~p~~Rps~~~~l~  111 (135)
                      +|.+||++.++..
T Consensus       244 ~p~~Rp~~~~l~~  256 (261)
T cd05034         244 DPEERPTFEYLQS  256 (261)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999998864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.61  E-value=4.3e-15  Score=102.03  Aligned_cols=91  Identities=22%  Similarity=0.396  Sum_probs=75.2

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|+|||++...  .++.++|+|++|++++++++ |..||.+.+..+....+........+...+.++.+++.+|++.
T Consensus       198 ~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  275 (334)
T cd05100         198 LPVKWMAPEALFDR--VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHA  275 (334)
T ss_pred             cCceEcCHHHhccC--CcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccc
Confidence            34679999999764  68899999999999999998 8888988776666666655544455667788999999999999


Q ss_pred             CCCCCCCHHHHhhC
Q 032711           99 NPNDRPTAAQLMEH  112 (135)
Q Consensus        99 ~p~~Rps~~~~l~~  112 (135)
                      +|.+||++.+++.+
T Consensus       276 ~p~~Rps~~ell~~  289 (334)
T cd05100         276 VPSQRPTFKQLVED  289 (334)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999988764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.61  E-value=4.8e-16  Score=110.67  Aligned_cols=94  Identities=20%  Similarity=0.385  Sum_probs=78.4

Q ss_pred             ccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC----CCCCcccHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP----PIPDSVSRDARDFI   92 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~li   92 (135)
                      .-|...|||||++... ...|+..+|||++|+|+|||++|..||...+...+++++.++...    ......++++++|+
T Consensus       550 p~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll  629 (678)
T KOG0193|consen  550 PHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLL  629 (678)
T ss_pred             CccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHH
Confidence            3567899999999854 246899999999999999999999999976666777877777432    23456778999999


Q ss_pred             HHhcccCCCCCCCHHHHhh
Q 032711           93 LKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~  111 (135)
                      ..||.+++++||.+.+++.
T Consensus       630 ~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  630 SDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HHHHhcCcccCccHHHHHH
Confidence            9999999999999999876

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.61  E-value=5.3e-15  Score=100.25  Aligned_cols=91  Identities=22%  Similarity=0.381  Sum_probs=74.5

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||++.+.  .++.++|+||+|++++++++ |..||.+....+....+........+...+..+.+++.+||.
T Consensus       200 ~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  277 (304)
T cd05101         200 RLPVKWMAPEALFDR--VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWH  277 (304)
T ss_pred             CCCceeeCchhhccC--CCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcc
Confidence            345679999999764  68999999999999999998 788887777666665555444444556678899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++++
T Consensus       278 ~~p~~Rps~~e~l~  291 (304)
T cd05101         278 AIPSHRPTFKQLVE  291 (304)
T ss_pred             cChhhCCCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.61  E-value=7.1e-15  Score=97.01  Aligned_cols=90  Identities=24%  Similarity=0.483  Sum_probs=75.5

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|+|||.....  .++.++|+|++|++++++++ |..||...+.......+........+...+.++.+++.+|+..
T Consensus       166 ~~~~y~~Pe~~~~~--~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  243 (258)
T smart00219      166 LPIRWMAPESLKDG--KFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAE  243 (258)
T ss_pred             CcccccChHHhccC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcC
Confidence            56789999998653  68999999999999999998 7888877666666666666655556667889999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032711           99 NPNDRPTAAQLME  111 (135)
Q Consensus        99 ~p~~Rps~~~~l~  111 (135)
                      +|.+||++.++++
T Consensus       244 ~p~~Rpt~~~ll~  256 (258)
T smart00219      244 DPEDRPTFSELVE  256 (258)
T ss_pred             ChhhCcCHHHHHh
Confidence            9999999999875

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.61  E-value=3.2e-15  Score=101.40  Aligned_cols=91  Identities=22%  Similarity=0.407  Sum_probs=72.9

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|+|||.+...  .++.++|+||+|++++++++ |..||...+..+....+........+...+..+.+++.+|+..
T Consensus       185 ~~~~y~aPE~~~~~--~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  262 (303)
T cd05088         185 LPVRWMAIESLNYS--VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWRE  262 (303)
T ss_pred             CcccccCHHHHhcc--CCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCC
Confidence            35679999988764  57889999999999999998 9999987766655555544333334556778999999999999


Q ss_pred             CCCCCCCHHHHhhC
Q 032711           99 NPNDRPTAAQLMEH  112 (135)
Q Consensus        99 ~p~~Rps~~~~l~~  112 (135)
                      +|++||++++++.+
T Consensus       263 ~p~~Rp~~~~il~~  276 (303)
T cd05088         263 KPYERPSFAQILVS  276 (303)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999988753

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.61  E-value=5.8e-15  Score=97.96  Aligned_cols=91  Identities=21%  Similarity=0.456  Sum_probs=73.9

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||++...  .++.++|+|++|++++++++ |..||.+.+.......+..+...+.+...+.++.+++.+|+.
T Consensus       164 ~~~~~y~~PE~~~~~--~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  241 (260)
T cd05073         164 KFPIKWTAPEAINFG--SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWK  241 (260)
T ss_pred             cccccccCHhHhccC--CcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcc
Confidence            345679999999764  57889999999999999998 899998877665555555544444556788899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.+++.
T Consensus       242 ~~p~~Rp~~~~l~~  255 (260)
T cd05073         242 NRPEERPTFEYIQS  255 (260)
T ss_pred             cCcccCcCHHHHHH
Confidence            99999999988753

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.60  E-value=2.3e-15  Score=100.31  Aligned_cols=111  Identities=26%  Similarity=0.385  Sum_probs=83.1

Q ss_pred             hhhhhhhhhhhc------ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC
Q 032711            6 VEGLGNALRRKW------HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP   79 (135)
Q Consensus         6 ~~~~~~~~~~~~------~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~   79 (135)
                      +.++|.+.....      .+.|..|.|||++.+-  +|...+||||+||++.||+.|...|.+.+..++..++.....-+
T Consensus       159 i~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~--~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtp  236 (369)
T KOG0665|consen  159 ILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTP  236 (369)
T ss_pred             eccchhhcccCcccccCchhheeeccCchheecc--CCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCC
Confidence            455555444333      3678899999999986  59999999999999999999999888776666655543211000


Q ss_pred             ------------------------------CC-----------CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           80 ------------------------------IP-----------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        80 ------------------------------~~-----------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                                                    .|           ......+.+++.+||..+|++|.++.++|.|||++.+
T Consensus       237 d~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw  316 (369)
T KOG0665|consen  237 DPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVW  316 (369)
T ss_pred             CHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeee
Confidence                                          01           1123457899999999999999999999999999843

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.60  E-value=8.7e-15  Score=97.29  Aligned_cols=93  Identities=26%  Similarity=0.572  Sum_probs=71.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHHHcCCCCCC-CCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--VQALFKIARGELPPI-PDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~--~~~~~~i~~~~~~~~-~~~~~~~~~~li~   93 (135)
                      ...|+..|+|||++...  .++.++|+|++|++++++++|..||.+...  ......+......+. +...+..+.+++.
T Consensus       165 ~~~~~~~~~ape~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  242 (267)
T cd08229         165 SLVGTPYYMSPERIHEN--GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVN  242 (267)
T ss_pred             cccCCcCccCHHHhcCC--CccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHH
Confidence            34788899999999764  578899999999999999999999965443  223333333333322 2457789999999


Q ss_pred             HhcccCCCCCCCHHHHhh
Q 032711           94 KCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~  111 (135)
                      +|+..+|.+||++.++++
T Consensus       243 ~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         243 MCINPDPEKRPDITYVYD  260 (267)
T ss_pred             HhcCCCcccCCCHHHHHH
Confidence            999999999999997754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.60  E-value=7.6e-15  Score=97.75  Aligned_cols=89  Identities=21%  Similarity=0.438  Sum_probs=72.7

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      +..|++||.+...  .++.++|+|++|++++++++ |..||......+....+......+.+...+..+.+++.+|++.+
T Consensus       172 ~~~y~~pe~~~~~--~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  249 (267)
T cd05066         172 PIRWTAPEAIAYR--KFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKD  249 (267)
T ss_pred             ceeecCHhHhccC--ccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccC
Confidence            4679999999764  58999999999999999886 99999877665555555554333445567889999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032711          100 PNDRPTAAQLME  111 (135)
Q Consensus       100 p~~Rps~~~~l~  111 (135)
                      |.+||++.++++
T Consensus       250 p~~Rp~~~~i~~  261 (267)
T cd05066         250 RNERPKFEQIVS  261 (267)
T ss_pred             chhCCCHHHHHH
Confidence            999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.60  E-value=5.7e-15  Score=103.06  Aligned_cols=90  Identities=22%  Similarity=0.433  Sum_probs=70.0

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHH-HHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFK-IARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      ++..|+|||++...  .++.++|+||+|++++++++ |..||........... +..+.....+...+.++.+++.+||+
T Consensus       278 ~~~~y~aPE~~~~~--~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  355 (375)
T cd05104         278 LPVKWMAPESIFNC--VYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWD  355 (375)
T ss_pred             CCcceeChhHhcCC--CCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHcc
Confidence            45679999999764  68999999999999999998 8888876544333333 33332233455667899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++++
T Consensus       356 ~dP~~RPs~~eil~  369 (375)
T cd05104         356 ADPLKRPTFKQIVQ  369 (375)
T ss_pred             CChhHCcCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.60  E-value=1e-14  Score=96.78  Aligned_cols=92  Identities=27%  Similarity=0.645  Sum_probs=72.9

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHHHcCCCCCCCC-cccHHHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WVQALFKIARGELPPIPD-SVSRDARDFILK   94 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~--~~~~~~~i~~~~~~~~~~-~~~~~~~~li~~   94 (135)
                      ..|+..|+|||.+.+.  .++.++|+|++|++++++++|+.||....  ..+....+..+...+.+. ..+..+.+++.+
T Consensus       166 ~~~~~~y~apE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  243 (267)
T cd08224         166 LVGTPYYMSPERIHEN--GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSR  243 (267)
T ss_pred             ecCCccccCHHHhccC--CCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHH
Confidence            4688899999998764  68889999999999999999999986543  223334444444444444 677889999999


Q ss_pred             hcccCCCCCCCHHHHhh
Q 032711           95 CLQVNPNDRPTAAQLME  111 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~  111 (135)
                      ||..+|.+||++.+++.
T Consensus       244 cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         244 CINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HcCCCcccCCCHHHHHH
Confidence            99999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.59  E-value=1.1e-14  Score=98.75  Aligned_cols=91  Identities=21%  Similarity=0.431  Sum_probs=71.2

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHc-CCCCCCCCcccHHHHHHHHHhc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIAR-GELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      .++..|+|||.+...  .++.++|+||+|++++++++ |..||.............. ......+...+.++.+++.+|+
T Consensus       204 ~~~~~y~aPE~~~~~--~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  281 (302)
T cd05055         204 RLPVKWMAPESIFNC--VYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCW  281 (302)
T ss_pred             CcccccCCHhhhccC--CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHc
Confidence            456789999998764  57899999999999999998 8999877655444333332 2222344556889999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      ..+|++||++.++++
T Consensus       282 ~~~p~~Rpt~~ell~  296 (302)
T cd05055         282 DADPLKRPTFKQIVQ  296 (302)
T ss_pred             CCCchhCcCHHHHHH
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.59  E-value=1.4e-14  Score=95.87  Aligned_cols=90  Identities=20%  Similarity=0.391  Sum_probs=73.8

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|+|||.+...  .++.++|+||+|++++++++ |..||...........+........+...+..+.+++.+||..
T Consensus       161 ~~~~~~ape~~~~~--~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  238 (256)
T cd05039         161 LPVKWTAPEALREK--KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWEL  238 (256)
T ss_pred             CcccccCchhhcCC--cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhcc
Confidence            45679999998754  67889999999999999997 9999987776666655554433445566789999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032711           99 NPNDRPTAAQLME  111 (135)
Q Consensus        99 ~p~~Rps~~~~l~  111 (135)
                      +|.+||++++++.
T Consensus       239 ~p~~Rp~~~~l~~  251 (256)
T cd05039         239 DPAKRPTFKQLRE  251 (256)
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.59  E-value=1.2e-15  Score=109.64  Aligned_cols=87  Identities=22%  Similarity=0.483  Sum_probs=80.1

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      .+.|||||.+...  +++.++|||=+|+++||++. |..||.+....+.+.++.++.-.+.|..+++.+..++.+||.++
T Consensus       555 PIKWmaPESINfR--rFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWaye  632 (974)
T KOG4257|consen  555 PIKWMAPESINFR--RFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYE  632 (974)
T ss_pred             ceeecCccccchh--cccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCChHHHHHHHHHhccC
Confidence            4689999999875  79999999999999999866 99999999988999999999888999999999999999999999


Q ss_pred             CCCCCCHHHH
Q 032711          100 PNDRPTAAQL  109 (135)
Q Consensus       100 p~~Rps~~~~  109 (135)
                      |.+||.+.++
T Consensus       633 P~kRPrftei  642 (974)
T KOG4257|consen  633 PSKRPRFTEI  642 (974)
T ss_pred             cccCCcHHHH
Confidence            9999998655

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.59  E-value=7.7e-15  Score=107.85  Aligned_cols=87  Identities=23%  Similarity=0.438  Sum_probs=75.3

Q ss_pred             ccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCc-HHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVE-WVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      ..|||||.+...  .|+.++||||+|+++||+++ |..||.+.. ..+.+..+..+.-...|..++.+..++|..||+.+
T Consensus       485 ~kWmApEsl~~~--~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~  562 (609)
T KOG0200|consen  485 VKWMAPESLFDR--VFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNAD  562 (609)
T ss_pred             eeecCHHHhccC--cccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCC
Confidence            359999999874  69999999999999999988 889998865 45555667777777788888999999999999999


Q ss_pred             CCCCCCHHHHh
Q 032711          100 PNDRPTAAQLM  110 (135)
Q Consensus       100 p~~Rps~~~~l  110 (135)
                      |++||++.++.
T Consensus       563 p~~RP~F~~~~  573 (609)
T KOG0200|consen  563 PEDRPTFSECV  573 (609)
T ss_pred             cccCCCHHHHH
Confidence            99999998765

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.59  E-value=1.5e-14  Score=98.04  Aligned_cols=91  Identities=22%  Similarity=0.418  Sum_probs=72.1

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||++.+.  .++.++|+||+|++++++++ |..||.+.........+..+...+.+...+..+.+++.+|+.
T Consensus       172 ~~~~~y~~PE~~~~~--~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~  249 (303)
T cd05110         172 KMPIKWMALECIHYR--KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWM  249 (303)
T ss_pred             ccccccCCHHHhccC--CCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcC
Confidence            346789999998764  68999999999999999987 889987766544444444444444455677889999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.+++.
T Consensus       250 ~~p~~Rp~~~~l~~  263 (303)
T cd05110         250 IDADSRPKFKELAA  263 (303)
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999998765

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.59  E-value=5.5e-15  Score=111.93  Aligned_cols=100  Identities=22%  Similarity=0.376  Sum_probs=79.8

Q ss_pred             hhhcccccccccchhhhhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHcCCCCCC---CCcccHHH
Q 032711           14 RRKWHVSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWVQALFKIARGELPPI---PDSVSRDA   88 (135)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~-~~~~~~~dvws~G~~l~~l~~g~~p~~~-~~~~~~~~~i~~~~~~~~---~~~~~~~~   88 (135)
                      ..+..+||..|+|||++.+.. ..|+.|+|+||+|++++||+.   ||.. ..+...+..+.++..+..   ....-+..
T Consensus       771 ~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e  847 (1351)
T KOG1035|consen  771 DLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEE  847 (1351)
T ss_pred             ccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHH
Confidence            445679999999999998763 269999999999999999985   4643 455667777776665433   23344567


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhhCcCCC
Q 032711           89 RDFILKCLQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        89 ~~li~~~l~~~p~~Rps~~~~l~~~~~~  116 (135)
                      +.+|+++++.||.+||++.++|.+.|+-
T Consensus       848 ~slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  848 ASLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             HHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence            8899999999999999999999998886

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.58  E-value=1.7e-14  Score=96.66  Aligned_cols=89  Identities=27%  Similarity=0.475  Sum_probs=74.7

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      +..|++||.+...  .++.++|+|++|++++++++ |..||.+....+....+......+.+...+..+.+++.+||..+
T Consensus       174 ~~~y~~PE~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  251 (279)
T cd05057         174 PIKWMALESILHR--IYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMID  251 (279)
T ss_pred             cccccCHHHhhcC--CcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            4679999998754  67899999999999999998 99999887766666666666555566677889999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032711          100 PNDRPTAAQLME  111 (135)
Q Consensus       100 p~~Rps~~~~l~  111 (135)
                      |..||++.+++.
T Consensus       252 p~~Rp~~~~l~~  263 (279)
T cd05057         252 AESRPTFKELIN  263 (279)
T ss_pred             hhhCCCHHHHHH
Confidence            999999998764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.58  E-value=1.5e-14  Score=96.37  Aligned_cols=91  Identities=23%  Similarity=0.401  Sum_probs=74.1

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|++||.+...  .++.++|+||+|++++++++ |..||.+.+..+....+........+...+..+.+++.+|+.
T Consensus       176 ~~~~~~~~pe~~~~~--~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~  253 (273)
T cd05074         176 KLPVKWLALESLADN--VYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWS  253 (273)
T ss_pred             cCchhhcCHhHHhcC--ccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcC
Confidence            345679999998764  57889999999999999998 888988777666665555554444455677899999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|++||++.++++
T Consensus       254 ~~p~~Rps~~~~~~  267 (273)
T cd05074         254 PEPKCRPSFQHLRD  267 (273)
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.58  E-value=1.3e-14  Score=96.61  Aligned_cols=92  Identities=21%  Similarity=0.363  Sum_probs=67.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEML-TRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~-~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|+..|+|||.+... ..++.++||||+|+++|+++ .|..|+......+... ...... ........++.+++.+||
T Consensus       168 ~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~li~~cl  244 (262)
T cd05077         168 CVERIPWIAPECVEDS-KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FYEGQC-MLVTPSCKELADLMTHCM  244 (262)
T ss_pred             ccccccccChhhhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HHhcCc-cCCCCChHHHHHHHHHHc
Confidence            3578889999988743 36889999999999999997 4777876654333222 222221 222334578899999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      +.+|.+||++.+++.+
T Consensus       245 ~~dp~~Rp~~~~il~~  260 (262)
T cd05077         245 NYDPNQRPFFRAIMRD  260 (262)
T ss_pred             CCChhhCcCHHHHHHh
Confidence            9999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.58  E-value=1.3e-14  Score=96.67  Aligned_cols=88  Identities=20%  Similarity=0.416  Sum_probs=72.3

Q ss_pred             ccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccCC
Q 032711           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP  100 (135)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p  100 (135)
                      ..|+|||.+...  .++.++|+|++|++++++++ |..||...+..+....+......+.+...+..+.+++.+||..+|
T Consensus       175 ~~y~~PE~~~~~--~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p  252 (269)
T cd05065         175 IRWTAPEAIAYR--KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDR  252 (269)
T ss_pred             eeecCHhHhccC--cccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCCh
Confidence            469999999764  68899999999999999886 999998777666666655443344556678899999999999999


Q ss_pred             CCCCCHHHHhh
Q 032711          101 NDRPTAAQLME  111 (135)
Q Consensus       101 ~~Rps~~~~l~  111 (135)
                      .+||++.+++.
T Consensus       253 ~~Rp~~~~i~~  263 (269)
T cd05065         253 NARPKFGQIVS  263 (269)
T ss_pred             hhCcCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.58  E-value=1.6e-14  Score=97.71  Aligned_cols=90  Identities=16%  Similarity=0.168  Sum_probs=70.1

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH-HH--------HHHHHHcCCCCCCCCcccHHH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQ--------ALFKIARGELPPIPDSVSRDA   88 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~-~~--------~~~~i~~~~~~~~~~~~~~~~   88 (135)
                      ..||+.|+|||+..+.  .++.++||||+|++++++++|+.||.+... ..        ....+.....  .....++.+
T Consensus       193 ~~gt~~y~ape~~~~~--~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  268 (294)
T PHA02882        193 HRGTLYYAGLDAHNGA--CVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKI--KIKNANKFI  268 (294)
T ss_pred             cCCCccccCHHHhCCC--CCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhh--ccCCCCHHH
Confidence            4799999999998764  689999999999999999999999977632 11        1122222221  123457889


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhh
Q 032711           89 RDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        89 ~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      .+++..|+..+|++||+..++++
T Consensus       269 ~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        269 YDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHHHHHHhCCCCCCCCHHHHHH
Confidence            99999999999999999998865

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.58  E-value=2.2e-14  Score=97.25  Aligned_cols=91  Identities=16%  Similarity=0.296  Sum_probs=68.3

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCcHHHHHHHHHc-------CCCCCCCCcccHHHH
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT--RCRPYFGVEWVQALFKIAR-------GELPPIPDSVSRDAR   89 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~--g~~p~~~~~~~~~~~~i~~-------~~~~~~~~~~~~~~~   89 (135)
                      .++..|+|||++...  .++.++|+||+|++++++++  +..||.+.........+..       ......+..++..+.
T Consensus       201 ~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (304)
T cd05096         201 VLPIRWMAWECILMG--KFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLY  278 (304)
T ss_pred             CCCccccCHHHHhcC--CCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHH
Confidence            457789999998764  68999999999999999986  5667776554443322211       111223456778999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhh
Q 032711           90 DFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      +++.+||..+|.+||++.++.+
T Consensus       279 ~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         279 ELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             HHHHHHccCCchhCcCHHHHHH
Confidence            9999999999999999999853

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.57  E-value=2.3e-14  Score=94.71  Aligned_cols=90  Identities=19%  Similarity=0.351  Sum_probs=73.2

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      .+..|+|||.+...  .++.++|+|++|++++++++ |..||......+....+.++.....+...+..+.+++.+||..
T Consensus       159 ~~~~y~~pe~~~~~--~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  236 (254)
T cd05083         159 LPVKWTAPEALKHK--KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWET  236 (254)
T ss_pred             CCceecCHHHhccC--CcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCC
Confidence            34579999998753  68899999999999999997 8999987776665555555443344566788999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032711           99 NPNDRPTAAQLME  111 (135)
Q Consensus        99 ~p~~Rps~~~~l~  111 (135)
                      +|..||++.+++.
T Consensus       237 ~p~~Rp~~~~l~~  249 (254)
T cd05083         237 EPKKRPSFHKLRE  249 (254)
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999998864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.57  E-value=7.6e-16  Score=112.46  Aligned_cols=94  Identities=21%  Similarity=0.436  Sum_probs=84.6

Q ss_pred             ccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccCC
Q 032711           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP  100 (135)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p  100 (135)
                      ..|.|||.+...  +++.++||||+|+|+||+++ |..||=+...++.+..|..+.-.+.|.+++..+..||..||++|.
T Consensus       798 iRWTAPEAIa~R--KFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR  875 (996)
T KOG0196|consen  798 IRWTAPEAIAYR--KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDR  875 (996)
T ss_pred             eeecChhHhhhc--ccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHh
Confidence            589999999986  69999999999999999766 999999999999999999888888999999999999999999999


Q ss_pred             CCCCCHHHHhh--CcCCCC
Q 032711          101 NDRPTAAQLME--HPFVKR  117 (135)
Q Consensus       101 ~~Rps~~~~l~--~~~~~~  117 (135)
                      ..||.+.|++.  +.++++
T Consensus       876 ~~RP~F~qiV~~lDklIrn  894 (996)
T KOG0196|consen  876 NRRPKFAQIVSTLDKLIRN  894 (996)
T ss_pred             hcCCCHHHHHHHHHHHhcC
Confidence            99999999864  445554

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.57  E-value=4.6e-15  Score=103.61  Aligned_cols=114  Identities=28%  Similarity=0.446  Sum_probs=82.3

Q ss_pred             hhhhhhhhhhhhcc----cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCC---CCc---HHHHHHHHH-
Q 032711            5 TVEGLGNALRRKWH----VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVE---WVQALFKIA-   73 (135)
Q Consensus         5 ~~~~~~~~~~~~~~----~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~---~~~---~~~~~~~i~-   73 (135)
                      +|.++||+.....+    +-|.-|.||||+.+.  +|+..+||||++|++|||+||...|.   +.+   ..+.+.+|. 
T Consensus       394 KIaDlGNACW~~khFT~DIQTRQYRapEVllGs--gY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~E  471 (590)
T KOG1290|consen  394 KIADLGNACWVHKHFTEDIQTRQYRAPEVLLGS--GYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIME  471 (590)
T ss_pred             EEeeccchhhhhhhhchhhhhhhccCcceeecC--CCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHH
Confidence            47788988775443    568899999999986  79999999999999999999987763   211   122222221 


Q ss_pred             -----------cCCC-------------------CC----------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCc
Q 032711           74 -----------RGEL-------------------PP----------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHP  113 (135)
Q Consensus        74 -----------~~~~-------------------~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~  113 (135)
                                 .+.+                   .+          .+.....++.+|+.-||+++|.+|+++.++++||
T Consensus       472 LLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hP  551 (590)
T KOG1290|consen  472 LLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHP  551 (590)
T ss_pred             HHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCc
Confidence                       1110                   00          1122345678899999999999999999999999


Q ss_pred             CCCCCCC
Q 032711          114 FVKRPLP  120 (135)
Q Consensus       114 ~~~~~~~  120 (135)
                      |++....
T Consensus       552 wLn~~~~  558 (590)
T KOG1290|consen  552 WLNPVAG  558 (590)
T ss_pred             cccCCCC
Confidence            9996433

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.56  E-value=3.1e-14  Score=95.98  Aligned_cols=92  Identities=23%  Similarity=0.346  Sum_probs=69.9

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCcHHHHHHHHHcC-------CCCCCCCcccHHH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT--RCRPYFGVEWVQALFKIARG-------ELPPIPDSVSRDA   88 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~--g~~p~~~~~~~~~~~~i~~~-------~~~~~~~~~~~~~   88 (135)
                      ..++..|+|||++...  .++.++|+||+|+++|++++  +..||........+..+...       .....+...+.++
T Consensus       192 ~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  269 (296)
T cd05051         192 APLPIRWMAWESVLLG--KFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDI  269 (296)
T ss_pred             CCCCceecCHHHhhcC--CCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHH
Confidence            3456789999998764  68999999999999999987  67788766555444433221       1112334567899


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhh
Q 032711           89 RDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        89 ~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      .+++.+|+..+|.+||++.++++
T Consensus       270 ~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         270 YELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             HHHHHHHhccChhcCCCHHHHHH
Confidence            99999999999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.56  E-value=2.5e-14  Score=100.63  Aligned_cols=92  Identities=23%  Similarity=0.411  Sum_probs=71.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHH-HHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQAL-FKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ..++..|+|||++.+.  .++.++||||+|++++++++ |..||......... ..+..+.....+..++..+.+++.+|
T Consensus       299 ~~~~~~y~aPE~~~~~--~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  376 (400)
T cd05105         299 TFLPVKWMAPESIFDN--LYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKC  376 (400)
T ss_pred             cCCCcceEChhhhcCC--CCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHH
Confidence            3566789999999764  68999999999999999987 88888765433333 33333333345567788999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032711           96 LQVNPNDRPTAAQLME  111 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~  111 (135)
                      |..+|++||++.++.+
T Consensus       377 l~~dP~~RPt~~~l~~  392 (400)
T cd05105         377 WNSEPEKRPSFLHLSD  392 (400)
T ss_pred             CccCHhHCcCHHHHHH
Confidence            9999999999988764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.55  E-value=3.8e-14  Score=103.46  Aligned_cols=104  Identities=14%  Similarity=0.103  Sum_probs=68.2

Q ss_pred             hcccccccccchhhhhccCC--------------------CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHH-Hc
Q 032711           16 KWHVSRWNSLTDQVVNSKNG--------------------GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI-AR   74 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~--------------------~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i-~~   74 (135)
                      ...+|++.|+|||.+.....                    .++.++||||+||++++|+.+..++.  +....+..+ ..
T Consensus       315 ~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~--~~~~~~~~~l~~  392 (566)
T PLN03225        315 KEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD--SNLIQFNRQLKR  392 (566)
T ss_pred             cccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCc--hHHHHHHHHHHh
Confidence            34678999999997653210                    23456799999999999998655432  221111111 11


Q ss_pred             CCC----------C----------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           75 GEL----------P----------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        75 ~~~----------~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      ...          .          ..........++|+.+||..||.+||++.++++||||......
T Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~  459 (566)
T PLN03225        393 NDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGLL  459 (566)
T ss_pred             cCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCcc
Confidence            000          0          0011123345689999999999999999999999999875553

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.55  E-value=4e-14  Score=94.82  Aligned_cols=92  Identities=21%  Similarity=0.339  Sum_probs=69.0

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEML-TRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~-~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..++..|+|||.+... ..++.++|+|++|+++|+++ .|..||...............  ...+......+.+++.+||
T Consensus       180 ~~~~~~~~aPe~~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl  256 (274)
T cd05076         180 RVERIPWIAPECVPGG-NSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKK--HRLPEPSCKELATLISQCL  256 (274)
T ss_pred             cccCCcccCchhhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHhc--cCCCCCCChHHHHHHHHHc
Confidence            3577889999998764 35799999999999999985 688888765543332222211  1233345678999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..+|.+||++.+++.+
T Consensus       257 ~~~p~~Rps~~~il~~  272 (274)
T cd05076         257 TYEPTQRPSFRTILRD  272 (274)
T ss_pred             ccChhhCcCHHHHHHh
Confidence            9999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.55  E-value=1.7e-15  Score=111.02  Aligned_cols=99  Identities=20%  Similarity=0.294  Sum_probs=73.0

Q ss_pred             hhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCcHHHHHHHHHcCCCCCCCCcccH--HHHHH
Q 032711           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSR--DARDF   91 (135)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~l   91 (135)
                      .....||-+|+|||++...  .-+..+|++++||++|..++| ..||....  +.-..|.++..........+  ++.+|
T Consensus       671 ~s~~sGt~GW~APE~L~~~--~~~~avDiFslGCvfyYvltgG~HpFGd~~--~R~~NIl~~~~~L~~L~~~~d~eA~dL  746 (903)
T KOG1027|consen  671 LSGGSGTSGWQAPEQLRED--RKTQAVDIFSLGCVFYYVLTGGSHPFGDSL--ERQANILTGNYTLVHLEPLPDCEAKDL  746 (903)
T ss_pred             ccCCCCcccccCHHHHhcc--ccCcccchhhcCceEEEEecCCccCCCchH--HhhhhhhcCccceeeeccCchHHHHHH
Confidence            3456899999999999875  456789999999999887775 78885532  22223444433111111111  88999


Q ss_pred             HHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           92 ILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      |.+|++++|..||++.+++.||+|=.
T Consensus       747 I~~ml~~dP~~RPsa~~VL~HPlFW~  772 (903)
T KOG1027|consen  747 ISRMLNPDPQLRPSATDVLNHPLFWD  772 (903)
T ss_pred             HHHhcCCCcccCCCHHHHhCCCccCC
Confidence            99999999999999999999998854

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.54  E-value=3.5e-14  Score=95.26  Aligned_cols=91  Identities=21%  Similarity=0.358  Sum_probs=66.8

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH--H-------------HHHHHHcCCCCCCCCc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV--Q-------------ALFKIARGELPPIPDS   83 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~--~-------------~~~~i~~~~~~~~~~~   83 (135)
                      .++..|++||.+...  .++.++|+||+|++++++++|..|+......  +             ....+......+.+..
T Consensus       171 ~~~~~~~~PE~~~~~--~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (283)
T cd05080         171 DSPVFWYAVECLKEN--KFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKN  248 (283)
T ss_pred             CCCceeeCHhHhccc--CCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCC
Confidence            345679999998764  5789999999999999999999887543210  0             0001111122234556


Q ss_pred             ccHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           84 VSRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        84 ~~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      .+..+.+++.+||..+|++||++.+++.
T Consensus       249 ~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         249 CPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             CCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            7889999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.54  E-value=1.4e-14  Score=105.21  Aligned_cols=89  Identities=29%  Similarity=0.519  Sum_probs=80.7

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      -..|.|||.+...  .++.++|+|.+|+.+|||++ |..||.+..-..++..|..+...+.|..++.++.+++..||..+
T Consensus       278 PfAWCaPEsLrh~--kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~csedIY~imk~cWah~  355 (1039)
T KOG0199|consen  278 PFAWCAPESLRHR--KFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHN  355 (1039)
T ss_pred             cccccCHhHhccc--cccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCCChHHHHHHHHHhccCC
Confidence            3579999999875  79999999999999999998 78899999988888888877777888899999999999999999


Q ss_pred             CCCCCCHHHHhh
Q 032711          100 PNDRPTAAQLME  111 (135)
Q Consensus       100 p~~Rps~~~~l~  111 (135)
                      |.+||++..+..
T Consensus       356 paDRptFsair~  367 (1039)
T KOG0199|consen  356 PADRPTFSAIRE  367 (1039)
T ss_pred             ccccccHHHHHH
Confidence            999999998854

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.54  E-value=6.7e-14  Score=93.28  Aligned_cols=93  Identities=19%  Similarity=0.329  Sum_probs=67.5

Q ss_pred             ccccccccchhhhhccC-----CCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCC-----CCCCCcccH
Q 032711           18 HVSRWNSLTDQVVNSKN-----GGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGEL-----PPIPDSVSR   86 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~-----~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~-----~~~~~~~~~   86 (135)
                      ..|+..|+|||++....     ..++.++|+||+|++++++++ |..||......+..........     +......+.
T Consensus       162 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (269)
T cd05087         162 LWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSD  241 (269)
T ss_pred             cCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCCh
Confidence            45677899999986431     135789999999999999996 9999977665544433222211     112234577


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           87 DARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        87 ~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      ...+++.+|+ .+|++||++.+++.
T Consensus       242 ~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         242 RWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHHHHHHHHh-cCcccCCCHHHHHH
Confidence            8889999998 68999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.54  E-value=4.2e-15  Score=105.79  Aligned_cols=104  Identities=24%  Similarity=0.367  Sum_probs=89.7

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      .+.||++-|.|||++.+.. ..++.+|+|++|+++|.+..|..||.+.+..+...+...+.+ .++..++-++.+++.++
T Consensus       212 qt~cgsppyAaPEl~~g~~-y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~-rIp~~ms~dce~lLrk~  289 (596)
T KOG0586|consen  212 QTFCGSPPYAAPELFNGKK-YDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY-RIPFYMSCDCEDLLRKF  289 (596)
T ss_pred             cccCCCCCccChHhhcCcc-cCCcceehhhhhhhheeeeecccccCCcccccccchheeeee-cccceeechhHHHHHHh
Confidence            4679999999999999863 458889999999999999999999988776555555555555 57788899999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      |..+|.+|+++.+++.|.|.......
T Consensus       290 lvl~Pskr~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  290 LVLNPSKRGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             hccCccccCCHHHhhhhcccchhhhh
Confidence            99999999999999999999976665

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.54  E-value=8e-14  Score=94.19  Aligned_cols=91  Identities=21%  Similarity=0.370  Sum_probs=68.3

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCcHHHHHHHHH-------cCCCCCCCCcccHHHH
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT--RCRPYFGVEWVQALFKIA-------RGELPPIPDSVSRDAR   89 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~--g~~p~~~~~~~~~~~~i~-------~~~~~~~~~~~~~~~~   89 (135)
                      .++..|++||+....  .++.++|+||+|+++|++++  |..||......+......       .....+.+..++..+.
T Consensus       193 ~~~~~~~~pe~~~~~--~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (296)
T cd05095         193 VLPIRWMSWESILLG--KFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLY  270 (296)
T ss_pred             cCccccCCHHHHhcC--CccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHH
Confidence            345689999988764  68999999999999999998  678887655443332211       1112233456778999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhh
Q 032711           90 DFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      +++.+||..+|.+||++.++.+
T Consensus       271 ~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         271 KLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHHHHHcCCCcccCCCHHHHHH
Confidence            9999999999999999998864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.53  E-value=7.6e-14  Score=98.22  Aligned_cols=92  Identities=22%  Similarity=0.363  Sum_probs=73.0

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHH-HHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ..|+..|+|||.+...  .++.++|+|++|++++++++ |..||......+... .+..+.....+...+.++.+++.+|
T Consensus       301 ~~~~~~y~aPE~~~~~--~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~c  378 (401)
T cd05107         301 TFLPLKWMAPESIFNN--LYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKC  378 (401)
T ss_pred             cCCCCceeChHHhcCC--CCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence            3567789999999764  57899999999999999998 888987655444333 3333333445666789999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032711           96 LQVNPNDRPTAAQLME  111 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~  111 (135)
                      |..+|..||++.+++.
T Consensus       379 l~~~P~~RPs~~ell~  394 (401)
T cd05107         379 WEEKFEIRPDFSQLVH  394 (401)
T ss_pred             cCCChhHCcCHHHHHH
Confidence            9999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.53  E-value=7.5e-14  Score=93.22  Aligned_cols=93  Identities=25%  Similarity=0.556  Sum_probs=73.2

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCC-CCCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGEL-PPIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~li~~~   95 (135)
                      ..++..|++||.+...  .++.++|+||+|++++++++ |..||...........+..... ...+..++..+.+++.+|
T Consensus       178 ~~~~~~y~~PE~~~~~--~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~  255 (275)
T cd05046         178 ALIPLRWLAPEAVQED--DFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRC  255 (275)
T ss_pred             ceeEEeecChhhhccC--CCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHH
Confidence            3566779999998764  57888999999999999998 7788876665555555443332 233556788999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032711           96 LQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~  112 (135)
                      |..+|.+||++.+++..
T Consensus       256 l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         256 WAVNPKDRPSFSELVSA  272 (275)
T ss_pred             cCCCcccCCCHHHHHHH
Confidence            99999999999998763

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.53  E-value=5.2e-14  Score=101.56  Aligned_cols=88  Identities=19%  Similarity=0.411  Sum_probs=78.2

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      .+.|.|||.+..+  .+..++|||++|++|||+.+ |..||.+.+....+..+.++.-...|..+++...+||+.||+++
T Consensus       429 PIKWTAPEsLAyN--tFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~Ws  506 (1157)
T KOG4278|consen  429 PIKWTAPESLAYN--TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWS  506 (1157)
T ss_pred             cccccCccccccc--ccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCC
Confidence            3689999999875  68999999999999999987 88899999888777777777667788999999999999999999


Q ss_pred             CCCCCCHHHHh
Q 032711          100 PNDRPTAAQLM  110 (135)
Q Consensus       100 p~~Rps~~~~l  110 (135)
                      |..||++.++-
T Consensus       507 PsDRPsFaeiH  517 (1157)
T KOG4278|consen  507 PSDRPSFAEIH  517 (1157)
T ss_pred             cccCccHHHHH
Confidence            99999997764

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.53  E-value=8.7e-14  Score=93.98  Aligned_cols=91  Identities=19%  Similarity=0.287  Sum_probs=68.0

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCcHHHHHHHHH-------cCCCCCCCCcccHHHH
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT--RCRPYFGVEWVQALFKIA-------RGELPPIPDSVSRDAR   89 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~--g~~p~~~~~~~~~~~~i~-------~~~~~~~~~~~~~~~~   89 (135)
                      .++..|+|||++...  .++.++|+||+|++++++++  +..||...........+.       .......+...+..+.
T Consensus       192 ~~~~~y~aPE~~~~~--~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  269 (295)
T cd05097         192 VLPIRWMAWESILLG--KFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVF  269 (295)
T ss_pred             cCceeecChhhhccC--CcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHH
Confidence            446789999998764  58999999999999999988  567776655443332221       1111223445678999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhh
Q 032711           90 DFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      +++.+|+..+|++||++.++++
T Consensus       270 ~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         270 KLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HHHHHHcCCCchhCcCHHHHHH
Confidence            9999999999999999998864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.53  E-value=4.2e-14  Score=94.48  Aligned_cols=104  Identities=26%  Similarity=0.293  Sum_probs=75.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc---------HHHHHHHHHcCCC----------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---------WVQALFKIARGEL----------   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~---------~~~~~~~i~~~~~----------   77 (135)
                      .++-|.+|.|||.+.+. ..|+.+.|+|++||+..|+++-++.|.+..         ..+++.+|..-..          
T Consensus       198 ~VVVTiWYRAPELLLGa-~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~l  276 (438)
T KOG0666|consen  198 PVVVTIWYRAPELLLGA-RHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDL  276 (438)
T ss_pred             ceEEEEEecChHHhccc-ccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhh
Confidence            35779999999999987 479999999999999999999877775421         1223333321000          


Q ss_pred             ---CC-----------CCC------------cccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           78 ---PP-----------IPD------------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        78 ---~~-----------~~~------------~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                         +.           ...            .-++...+|+.++|.+||.+|+++++++.|+||....-+
T Consensus       277 kk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp  346 (438)
T KOG0666|consen  277 KKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP  346 (438)
T ss_pred             hhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence               00           000            113347899999999999999999999999999986444

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.53  E-value=8.3e-15  Score=105.57  Aligned_cols=101  Identities=28%  Similarity=0.365  Sum_probs=78.1

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC---CCCCCcccHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDARDFI   92 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~li   92 (135)
                      ...+||+.|+|||++...  +|+..||.|++|++||||+-|+.||......+...++.....   .+....+++++.++|
T Consensus       829 hslvgt~nyiapevl~r~--g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li  906 (1034)
T KOG0608|consen  829 HSLVGTPNYIAPEVLART--GYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLI  906 (1034)
T ss_pred             hhhcCCCcccChHHhccc--CccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHH
Confidence            456999999999999986  799999999999999999999999987766555444443322   244567899999999


Q ss_pred             HHhcccCCCCCC---CHHHHhhCcCCCCCC
Q 032711           93 LKCLQVNPNDRP---TAAQLMEHPFVKRPL  119 (135)
Q Consensus        93 ~~~l~~~p~~Rp---s~~~~l~~~~~~~~~  119 (135)
                      .+++. +++.|.   .+.++..||||+...
T Consensus       907 ~kLc~-sad~RLGkng~d~vKaHpfFkgID  935 (1034)
T KOG0608|consen  907 QKLCC-SADSRLGKNGADQVKAHPFFKGID  935 (1034)
T ss_pred             HHHhc-ChhhhhcccchhhhhcCccccccc
Confidence            87543 344555   466799999999743

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.52  E-value=6.3e-15  Score=95.39  Aligned_cols=93  Identities=25%  Similarity=0.396  Sum_probs=67.7

Q ss_pred             cccccccchhhhhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH--HHHHHHHcCCC-CCCCCcccHHHHHHHHH
Q 032711           19 VSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV--QALFKIARGEL-PPIPDSVSRDARDFILK   94 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~-~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~--~~~~~i~~~~~-~~~~~~~~~~~~~li~~   94 (135)
                      ..|+.|.|||.+.... ...+.++||||+||++|+++.|..||...-..  +.-..+..... .+.....+..+.+++..
T Consensus       199 ~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~  278 (302)
T KOG2345|consen  199 RCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKS  278 (302)
T ss_pred             hCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHH
Confidence            4578899999987542 23589999999999999999999998532211  00111222222 12334478899999999


Q ss_pred             hcccCCCCCCCHHHHhh
Q 032711           95 CLQVNPNDRPTAAQLME  111 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~  111 (135)
                      |++.||.+||++.+++.
T Consensus       279 mlqvdP~qRP~i~~ll~  295 (302)
T KOG2345|consen  279 MLQVDPNQRPTIPELLS  295 (302)
T ss_pred             HhcCCcccCCCHHHHHH
Confidence            99999999999999874

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.52  E-value=7.6e-16  Score=108.93  Aligned_cols=101  Identities=27%  Similarity=0.350  Sum_probs=82.6

Q ss_pred             hhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC---CCCCCcccHHHHH
Q 032711           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDARD   90 (135)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~   90 (135)
                      ..++++||+.|+|||++.+.  +|+..-|+||+|+++|--++|..||..+.+  +-.+|....+   +..+..++.++.+
T Consensus       722 FRrsVVGTPAYLaPEVLrnk--GyNrSLDMWSVGVIiYVsLSGTFPFNEdEd--IndQIQNAaFMyPp~PW~eis~~Aid  797 (888)
T KOG4236|consen  722 FRRSVVGTPAYLAPEVLRNK--GYNRSLDMWSVGVIIYVSLSGTFPFNEDED--INDQIQNAAFMYPPNPWSEISPEAID  797 (888)
T ss_pred             hhhhhcCCccccCHHHHhhc--cccccccceeeeEEEEEEecccccCCCccc--hhHHhhccccccCCCchhhcCHHHHH
Confidence            34578999999999999986  799999999999999999999999976543  2223333322   2334568899999


Q ss_pred             HHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           91 FILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        91 li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      ||..+|+..-++|.+..+.+.|+|+.+.
T Consensus       798 lIn~LLqVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  798 LINNLLQVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             HHHHHHHHHHHHhcchHhhccchhhhcc
Confidence            9999999999999999999999999863

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.52  E-value=2.6e-14  Score=104.96  Aligned_cols=89  Identities=22%  Similarity=0.349  Sum_probs=72.0

Q ss_pred             cccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC-CCCcccHHHHHHHHHhc
Q 032711           19 VSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP-IPDSVSRDARDFILKCL   96 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~li~~~l   96 (135)
                      ..|+-|.+||++.-. +...+.|+|||++||+||.++....||.+....    .|..+.+.. ....++..+++||..||
T Consensus       216 ~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----aIlng~Y~~P~~p~ys~~l~~LI~~mL  291 (738)
T KOG1989|consen  216 YTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----AILNGNYSFPPFPNYSDRLKDLIRTML  291 (738)
T ss_pred             hCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----eEEeccccCCCCccHHHHHHHHHHHHh
Confidence            468999999998743 235799999999999999999999999876432    355555532 23578899999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      +.+|.+||++-|++.
T Consensus       292 ~~nP~~RPnI~Qv~~  306 (738)
T KOG1989|consen  292 QPNPDERPNIYQVLE  306 (738)
T ss_pred             ccCcccCCCHHHHHH
Confidence            999999999988764

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.52  E-value=7.9e-14  Score=96.21  Aligned_cols=92  Identities=24%  Similarity=0.476  Sum_probs=70.6

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHH-HHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQ-ALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      .++..|+|||++...  .++.++|+|++|++++++++ |..||....... ....+..+.....+...+.++.+++.+||
T Consensus       242 ~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl  319 (343)
T cd05103         242 RLPLKWMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCW  319 (343)
T ss_pred             CCCcceECcHHhcCC--CCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHc
Confidence            345679999998764  68899999999999999997 888887654322 22233333333445556788999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      +.+|.+||++.++++|
T Consensus       320 ~~~p~~Rps~~eil~~  335 (343)
T cd05103         320 HGEPSQRPTFSELVEH  335 (343)
T ss_pred             cCChhhCcCHHHHHHH
Confidence            9999999999999865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.52  E-value=7e-14  Score=93.91  Aligned_cols=92  Identities=22%  Similarity=0.377  Sum_probs=67.2

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---------------cHHHHHHHHHcCCCCCCCC
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV---------------EWVQALFKIARGELPPIPD   82 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~---------------~~~~~~~~i~~~~~~~~~~   82 (135)
                      ..|+..|+|||++.+.  .++.++|+||+|+++++++++..+....               ........+..+...+.+.
T Consensus       172 ~~~~~~y~apE~~~~~--~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (284)
T cd05079         172 LDSPVFWYAPECLIQS--KFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPP  249 (284)
T ss_pred             CCCCccccCHHHhccC--CCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCC
Confidence            4567789999998764  5788999999999999999876543211               0111112222233334456


Q ss_pred             cccHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           83 SVSRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        83 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      ..+..+.+++.+||+.+|.+||++.+++.
T Consensus       250 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~  278 (284)
T cd05079         250 NCPEEVYQLMRKCWEFQPSKRTTFQNLIE  278 (284)
T ss_pred             CCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            68899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.51  E-value=9.7e-15  Score=101.71  Aligned_cols=107  Identities=21%  Similarity=0.280  Sum_probs=82.7

Q ss_pred             hhhcccccccccchhhhhcc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH-HHHH--HHHcCC--CCCCCCcccH
Q 032711           14 RRKWHVSRWNSLTDQVVNSK--NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV-QALF--KIARGE--LPPIPDSVSR   86 (135)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~--~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~-~~~~--~i~~~~--~~~~~~~~~~   86 (135)
                      .+....||.+|++||++.-.  ....+.++||||+|+++|.++.|+.||...-.. +++.  -|.+..  ..+....++.
T Consensus       636 LTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVss  715 (775)
T KOG1151|consen  636 LTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSS  715 (775)
T ss_pred             eecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCH
Confidence            44567999999999987643  356789999999999999999999999765433 3332  122221  2234456889


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           87 DARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        87 ~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      ++.+||++||.+.-+.|....++-.||||.-+.-
T Consensus       716 eAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~r  749 (775)
T KOG1151|consen  716 EAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHIR  749 (775)
T ss_pred             HHHHHHHHHHHhhhhhhhhHHHHccCccccchhh
Confidence            9999999999999999999999999999975443

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.50  E-value=2e-13  Score=90.25  Aligned_cols=92  Identities=18%  Similarity=0.336  Sum_probs=67.0

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..++..|+|||.+......++.++|+||+|++++++++ |..|+................  ..+......+.+++.+||
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l  241 (259)
T cd05037         164 RVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQH--RLPMPDCAELANLINQCW  241 (259)
T ss_pred             cccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCC--CCCCCCchHHHHHHHHHh
Confidence            45678899999987643357899999999999999998 567776654332222222111  122223378899999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      ..+|.+||++.++++
T Consensus       242 ~~~p~~Rpt~~~il~  256 (259)
T cd05037         242 TYDPTKRPSFRAILR  256 (259)
T ss_pred             ccChhhCCCHHHHHH
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.50  E-value=3.1e-13  Score=90.07  Aligned_cols=92  Identities=25%  Similarity=0.391  Sum_probs=67.7

Q ss_pred             cccccccchhhhhcc-----CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCC-----CCCCCcccHH
Q 032711           19 VSRWNSLTDQVVNSK-----NGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGEL-----PPIPDSVSRD   87 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~-----~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~-----~~~~~~~~~~   87 (135)
                      .++..|+|||++...     ...++.++|+||+|++++++++ |..||......+.+..+.....     +..+...+..
T Consensus       163 ~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (269)
T cd05042         163 AVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDR  242 (269)
T ss_pred             CCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHH
Confidence            456779999998642     1246789999999999999998 7788877665555544433322     1223456788


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhh
Q 032711           88 ARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        88 ~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      ..+++..|+ .+|++||++.+++.
T Consensus       243 ~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         243 WYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHHHHHHHh-cCcccccCHHHHHH
Confidence            888999888 59999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.49  E-value=3.3e-13  Score=90.00  Aligned_cols=94  Identities=18%  Similarity=0.343  Sum_probs=69.2

Q ss_pred             cccccccccchhhhhcc-----CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCC-----CCCCCccc
Q 032711           17 WHVSRWNSLTDQVVNSK-----NGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGEL-----PPIPDSVS   85 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~-----~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~-----~~~~~~~~   85 (135)
                      ...|+..|+|||++...     ...++.++|+||+|++++++++ +..||...+..+.+..+.++..     +..+..++
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (268)
T cd05086         160 DKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYS  239 (268)
T ss_pred             CCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCc
Confidence            34678899999988532     1235778999999999999987 5678877666665555443322     12334567


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           86 RDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        86 ~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      ..+.+++..|+ .+|++||+++++++
T Consensus       240 ~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         240 ERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            88899999999 67999999999865

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.48  E-value=1e-13  Score=104.72  Aligned_cols=92  Identities=16%  Similarity=0.149  Sum_probs=67.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--CCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--PPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~li~~   94 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++++|++|..||.................  ......++..+.+++.+
T Consensus       190 ~~vGT~~YmAPE~l~g~--~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~r  267 (932)
T PRK13184        190 KIVGTPDYMAPERLLGV--PASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMK  267 (932)
T ss_pred             CCCCCCCCCCHHHhcCC--CCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHH
Confidence            35799999999999764  689999999999999999999999976544333222111111  11123567889999999


Q ss_pred             hcccCCCCCCCHHHHh
Q 032711           95 CLQVNPNDRPTAAQLM  110 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l  110 (135)
                      |+..+|++|++..+.+
T Consensus       268 cL~~DP~kR~ss~eeL  283 (932)
T PRK13184        268 ALAVDPAERYSSVQEL  283 (932)
T ss_pred             HccCChhhCcCHHHHH
Confidence            9999999998754433

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.47  E-value=8.2e-15  Score=103.39  Aligned_cols=110  Identities=28%  Similarity=0.456  Sum_probs=79.0

Q ss_pred             hhhhhhhhhhhc-----ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHH--HHHcCCCC
Q 032711            6 VEGLGNALRRKW-----HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF--KIARGELP   78 (135)
Q Consensus         6 ~~~~~~~~~~~~-----~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~--~i~~~~~~   78 (135)
                      +++||.+....-     .+-+.+|.|||++.+.  .|+...|+||+||.|||+.+|+..|.+......+.  +=.++.++
T Consensus       578 LCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~--~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p  655 (752)
T KOG0670|consen  578 LCDFGSASFASENEITPYLVSRFYRAPEIILGL--PYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFP  655 (752)
T ss_pred             eccCccccccccccccHHHHHHhccCcceeecC--cccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCc
Confidence            566666555432     2334589999999986  79999999999999999999999998765433321  11222211


Q ss_pred             C------------------------------------------------------CCCc---ccHHHHHHHHHhcccCCC
Q 032711           79 P------------------------------------------------------IPDS---VSRDARDFILKCLQVNPN  101 (135)
Q Consensus        79 ~------------------------------------------------------~~~~---~~~~~~~li~~~l~~~p~  101 (135)
                      .                                                      ++..   .-..+.+|+..|+..||.
T Consensus       656 ~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~  735 (752)
T KOG0670|consen  656 NKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPE  735 (752)
T ss_pred             HHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChh
Confidence            0                                                      1111   123578899999999999


Q ss_pred             CCCCHHHHhhCcCCCC
Q 032711          102 DRPTAAQLMEHPFVKR  117 (135)
Q Consensus       102 ~Rps~~~~l~~~~~~~  117 (135)
                      +|.+..++|+||||..
T Consensus       736 KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  736 KRITVNQALKHPFITE  751 (752)
T ss_pred             hcCCHHHHhcCCcccC
Confidence            9999999999999964

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.46  E-value=3.6e-13  Score=87.94  Aligned_cols=100  Identities=30%  Similarity=0.450  Sum_probs=78.5

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC--C-------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG--E-------------------   76 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~--~-------------------   76 (135)
                      .+-|.+|.+||.+.+. ..|+.+.|+|..||++.+|+++.+-+.+.....++..|..-  .                   
T Consensus       188 rvvTLwYrppEllLG~-r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie  266 (376)
T KOG0669|consen  188 RVVTLWYRPPELLLGD-REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIE  266 (376)
T ss_pred             ceeeeecCCHHHhhcc-cccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhcc
Confidence            4558999999999986 47899999999999999999999888887766665544320  0                   


Q ss_pred             CCCCC-------------CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           77 LPPIP-------------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        77 ~~~~~-------------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      .++++             ..-.+++.+++..++..||.+|+.+.+++.|.||-..
T Consensus       267 ~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd  321 (376)
T KOG0669|consen  267 LEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD  321 (376)
T ss_pred             CCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence            01111             1123478899999999999999999999999999764

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.45  E-value=6.2e-13  Score=89.22  Aligned_cols=89  Identities=16%  Similarity=0.293  Sum_probs=63.9

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH---------------HHH-HHHHcCCCCCCCCcc
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV---------------QAL-FKIARGELPPIPDSV   84 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~---------------~~~-~~i~~~~~~~~~~~~   84 (135)
                      +..|+|||+..+.  .++.++|+|++|+++++++++..++......               ..+ ..+......+.+...
T Consensus       174 ~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (284)
T cd05081         174 PIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGC  251 (284)
T ss_pred             ceEeeCHHHhccC--CcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCC
Confidence            4469999998764  5889999999999999999976554322110               001 111122222345567


Q ss_pred             cHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           85 SRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        85 ~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      +.++.+++.+||..+|++||++.+++.
T Consensus       252 ~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         252 PAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.43  E-value=1.3e-13  Score=106.14  Aligned_cols=93  Identities=15%  Similarity=0.232  Sum_probs=64.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHHH-c---------CCCC---C
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WVQALFKIA-R---------GELP---P   79 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~----~~~~~~~i~-~---------~~~~---~   79 (135)
                      ...|+..|+|||++...  .++.++||||+|+++||+++|+.||....    ......... .         ....   .
T Consensus       837 ~~~~t~~y~aPE~~~~~--~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  914 (968)
T PLN00113        837 KCFISSAYVAPETRETK--DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVS  914 (968)
T ss_pred             CccccccccCcccccCC--CCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCC
Confidence            34678999999998764  68999999999999999999999984321    011111100 0         0000   0


Q ss_pred             CCCcccHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           80 IPDSVSRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        80 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      .......++.+++.+|+..+|.+||+++++++
T Consensus       915 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~  946 (968)
T PLN00113        915 VNQNEIVEVMNLALHCTATDPTARPCANDVLK  946 (968)
T ss_pred             ccHHHHHHHHHHHHhhCcCCchhCcCHHHHHH
Confidence            01112235678889999999999999999875

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.42  E-value=5.3e-13  Score=89.34  Aligned_cols=90  Identities=26%  Similarity=0.434  Sum_probs=66.6

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH--------------HHHH-HHHcCCCCCCCCcc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV--------------QALF-KIARGELPPIPDSV   84 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~--------------~~~~-~i~~~~~~~~~~~~   84 (135)
                      ++..|++||.....  .++.++|+|++|++++++++|..|+......              .... .+......+.+...
T Consensus       174 ~~~~~~~Pe~~~~~--~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (284)
T cd05038         174 SPIFWYAPECLRTS--KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSC  251 (284)
T ss_pred             CcccccCcHHHccC--CCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccC
Confidence            34569999998764  6788999999999999999999887543211              1111 12222222334566


Q ss_pred             cHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           85 SRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        85 ~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      +.++.+++.+|+..+|.+||++.+++.
T Consensus       252 ~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         252 PDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             CHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.40  E-value=5.8e-13  Score=95.28  Aligned_cols=91  Identities=20%  Similarity=0.348  Sum_probs=72.0

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCcHHHHHHHH---HcCC----CCCCCCcccHHHH
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT--RCRPYFGVEWVQALFKI---ARGE----LPPIPDSVSRDAR   89 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~--g~~p~~~~~~~~~~~~i---~~~~----~~~~~~~~~~~~~   89 (135)
                      +-.+.|||+|.+...  .++.++|+|++|+.+||++.  ...||............   ..+.    .+..|..++..+.
T Consensus       700 vlpiRwmawEsillg--kFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~ly  777 (807)
T KOG1094|consen  700 VLPIRWMAWESILLG--KFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLY  777 (807)
T ss_pred             eeeeeehhHHHHHhc--cccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHH
Confidence            445789999999874  79999999999999999755  77898776655444332   2221    2356778899999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhh
Q 032711           90 DFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      +++.+||..+..+||+++++..
T Consensus       778 elml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  778 ELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             HHHHHHhchhhhcCCCHHHHHH
Confidence            9999999999999999998854

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.39  E-value=2.8e-13  Score=95.87  Aligned_cols=87  Identities=25%  Similarity=0.538  Sum_probs=76.0

Q ss_pred             ccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHc-CCCCCCCCcccHHHHHHHHHhcccC
Q 032711           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIAR-GELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      ..|+|||.+...  .|+.++|||++|+++||+.+ |..||.+....+....|.. +...+.+...+.....++.+|+..+
T Consensus       326 irWLAPEtl~~~--~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~  403 (474)
T KOG0194|consen  326 IRWLAPETLNTG--IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKD  403 (474)
T ss_pred             ceecChhhhccC--ccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCC
Confidence            589999999874  79999999999999999988 7889999999888888844 4445667788899999999999999


Q ss_pred             CCCCCCHHHHh
Q 032711          100 PNDRPTAAQLM  110 (135)
Q Consensus       100 p~~Rps~~~~l  110 (135)
                      |..|+++.++.
T Consensus       404 p~~R~tm~~i~  414 (474)
T KOG0194|consen  404 PEDRPTMSTIK  414 (474)
T ss_pred             hhhccCHHHHH
Confidence            99999998764

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.39  E-value=1.1e-12  Score=98.83  Aligned_cols=113  Identities=24%  Similarity=0.411  Sum_probs=92.3

Q ss_pred             hhhhhhhhhhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--CCCCCc
Q 032711            6 VEGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--PPIPDS   83 (135)
Q Consensus         6 ~~~~~~~~~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~   83 (135)
                      |+.+.+...-+.++||+.|+|||++...  +|+..+|.|++|+++|+.+-|+.||+++...+.+.++.....  +.-...
T Consensus       206 I~k~t~Ef~dKqvcgTPeyiaPeVilrq--gygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea  283 (1205)
T KOG0606|consen  206 IEKDTHEFQDKQVCGTPEYIAPEVILRQ--GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEA  283 (1205)
T ss_pred             hHHHHHHhhhccccCCccccChhhhhhh--ccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcC
Confidence            4445566666778999999999999986  699999999999999999999999999988888777665543  222345


Q ss_pred             ccHHHHHHHHHhcccCCCCCC---CHHHHhhCcCCCCCCC
Q 032711           84 VSRDARDFILKCLQVNPNDRP---TAAQLMEHPFVKRPLP  120 (135)
Q Consensus        84 ~~~~~~~li~~~l~~~p~~Rp---s~~~~l~~~~~~~~~~  120 (135)
                      .++++++++.++|..+|..|-   .+-++.+|.||.....
T Consensus       284 ~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw  323 (1205)
T KOG0606|consen  284 LPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDW  323 (1205)
T ss_pred             CCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeeccc
Confidence            689999999999999999885   3457788999987544

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.37  E-value=3.2e-13  Score=92.71  Aligned_cols=101  Identities=29%  Similarity=0.442  Sum_probs=73.7

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHH--------------HcCC----
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKI--------------ARGE----   76 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~-~~~~~~i--------------~~~~----   76 (135)
                      ...+||++|.|||++... +..+.++|+||.|+++..++++..||..... .+.+..+              ..+.    
T Consensus       235 anrAGT~GfRaPEvL~k~-~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~  313 (418)
T KOG1167|consen  235 ANRAGTPGFRAPEVLFRC-PRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLW  313 (418)
T ss_pred             cccCCCCCCCchHHHhhc-cCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeee
Confidence            456899999999999986 4678899999999999999999999864211 1110000              0000    


Q ss_pred             ----CC--------------------CC--------CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           77 ----LP--------------------PI--------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        77 ----~~--------------------~~--------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                          .+                    ..        .+..+..+.+++.+|+..||.+|++++++|+||||..
T Consensus       314 ~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~  386 (418)
T KOG1167|consen  314 QKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE  386 (418)
T ss_pred             ccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence                00                    00        1123447889999999999999999999999999984

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.36  E-value=1.4e-12  Score=94.45  Aligned_cols=103  Identities=30%  Similarity=0.527  Sum_probs=83.2

Q ss_pred             hcccccccccchhhhhc-cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC----CCCcccHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNS-KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP----IPDSVSRDARD   90 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~-~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~   90 (135)
                      ..+.||+.|||||+... ..++|+..+|+|++|+...|+..-.+|.+.......+..+.+..+.+    -+......+.+
T Consensus       170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~  249 (829)
T KOG0576|consen  170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHN  249 (829)
T ss_pred             hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHH
Confidence            35789999999997763 23579999999999999999988888877777666666555544422    23456788999


Q ss_pred             HHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           91 FILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        91 li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      |+..++..+|++||+++.++.|+|+...
T Consensus       250 fvK~altknpKkRptaeklL~h~fvs~~  277 (829)
T KOG0576|consen  250 FVKGALTKNPKKRPTAEKLLQHPFVSQT  277 (829)
T ss_pred             HHHHHhcCCCccCCChhhheeceeeccc
Confidence            9999999999999999999999998864

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.33  E-value=9.9e-12  Score=89.56  Aligned_cols=99  Identities=13%  Similarity=0.157  Sum_probs=66.1

Q ss_pred             cccccccchhhhhccCC--------------------CCCchhhHHHHHHHHHHHHhCCC-CCCCCcHHHH--------H
Q 032711           19 VSRWNSLTDQVVNSKNG--------------------GYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQA--------L   69 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~--------------------~~~~~~dvws~G~~l~~l~~g~~-p~~~~~~~~~--------~   69 (135)
                      .+++.|+|||.+.....                    ....+.|+||+|+++++|+.+.. |+.+......        .
T Consensus       371 ~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~  450 (507)
T PLN03224        371 MLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDL  450 (507)
T ss_pred             CCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchH
Confidence            34789999998864210                    11234799999999999999864 6543211110        0


Q ss_pred             --HHHHc-CCC-CCCCCcccHHHHHHHHHhcccCC---CCCCCHHHHhhCcCCCC
Q 032711           70 --FKIAR-GEL-PPIPDSVSRDARDFILKCLQVNP---NDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        70 --~~i~~-~~~-~~~~~~~~~~~~~li~~~l~~~p---~~Rps~~~~l~~~~~~~  117 (135)
                        ..... ... .......+...++++.++|..++   .+|+|+.+++.||||..
T Consensus       451 ~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        451 NRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             HHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence              11111 111 12334567889999999999766   68999999999999964

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.28  E-value=1.5e-11  Score=76.86  Aligned_cols=100  Identities=25%  Similarity=0.370  Sum_probs=76.0

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCC-------------------CC
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGE-------------------LP   78 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~-------------------~~   78 (135)
                      +-|.+|.+|+++-+. .-|+...|+||.||++.|+.. |.+.|.+.+..+++.+|-...                   ++
T Consensus       162 vvtlwyrppdvlfga-kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp  240 (292)
T KOG0662|consen  162 VVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYP  240 (292)
T ss_pred             eeeeeccCcceeeee-ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccC
Confidence            568899999999886 368999999999999999987 666677766656555543210                   01


Q ss_pred             CCC---------CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           79 PIP---------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        79 ~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      ..+         ..++...++++.+++.-+|.+|++++..++||||....
T Consensus       241 ~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s  290 (292)
T KOG0662|consen  241 IYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS  290 (292)
T ss_pred             CccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence            111         12344678999999999999999999999999998743

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.27  E-value=1.8e-11  Score=90.75  Aligned_cols=88  Identities=24%  Similarity=0.443  Sum_probs=77.4

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccC
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVN   99 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~   99 (135)
                      -+.|||-|.++..  .|++.+|||++|+.+||+++ |..|+.+....++-..+.++.-.+.|...+-++..++.+||..|
T Consensus       863 pikwmale~i~~~--~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid  940 (1177)
T KOG1025|consen  863 PIKWMALESIRIR--KYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPICTIDVYMVMVKCWMID  940 (1177)
T ss_pred             CcHHHHHHHhhcc--CCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCccHHHHHHHHHHhccC
Confidence            4578999999875  79999999999999999999 89999988877777777777777888899999999999999999


Q ss_pred             CCCCCCHHHHh
Q 032711          100 PNDRPTAAQLM  110 (135)
Q Consensus       100 p~~Rps~~~~l  110 (135)
                      +..||.++++-
T Consensus       941 ~~~rp~fkel~  951 (1177)
T KOG1025|consen  941 ADSRPTFKELA  951 (1177)
T ss_pred             cccCccHHHHH
Confidence            99999997653

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.24  E-value=1.4e-11  Score=81.49  Aligned_cols=103  Identities=24%  Similarity=0.414  Sum_probs=76.9

Q ss_pred             hhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc-------------------
Q 032711           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR-------------------   74 (135)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~-------------------   74 (135)
                      ..++.+-|..|.|||.+.+. ..|+..+||||+||+..|++..+..|...+..+++..|..                   
T Consensus       213 hMTqEVVTQYYRAPEiLMGa-RhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~  291 (449)
T KOG0664|consen  213 NMTHEVVTQYYRAPELLMGA-RRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKN  291 (449)
T ss_pred             hhHHHHHHHHhccHHHhhcc-hhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHH
Confidence            33445678899999999986 5799999999999999999998888877665555544322                   


Q ss_pred             ----CCC--CC--------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           75 ----GEL--PP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        75 ----~~~--~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                          ...  +.        .+..-..+...+...++..+|+.|.+.++.+.|++...
T Consensus       292 H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e  348 (449)
T KOG0664|consen  292 HVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE  348 (449)
T ss_pred             HhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence                111  11        12233456777888899999999999999999987653

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.21  E-value=3.4e-11  Score=83.74  Aligned_cols=91  Identities=22%  Similarity=0.437  Sum_probs=62.8

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc---H---HHHH-HHHHcCCC-----CCCC-Ccc-
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---W---VQAL-FKIARGEL-----PPIP-DSV-   84 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~---~---~~~~-~~i~~~~~-----~~~~-~~~-   84 (135)
                      .||.+|+|||.+..  +..+.++||||+|+++.|+++|+.+.....   .   .+-. ..+..+..     +.+. ... 
T Consensus       239 ~gt~gY~~PEy~~~--g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~  316 (361)
T KOG1187|consen  239 MGTFGYLAPEYAST--GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYP  316 (361)
T ss_pred             CCCCccCChhhhcc--CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCC
Confidence            89999999999986  368999999999999999999997765321   1   1100 11112111     1111 122 


Q ss_pred             ----cHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           85 ----SRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        85 ----~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                          -..+..+..+|+..++..||++.++.+
T Consensus       317 ~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  317 DEKEVKKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence                233566778999999999999998754

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.19  E-value=5.4e-11  Score=78.78  Aligned_cols=92  Identities=22%  Similarity=0.330  Sum_probs=74.8

Q ss_pred             cccccccchhhhhccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC-CCCCCCcccHHHHHHHHHhc
Q 032711           19 VSRWNSLTDQVVNSKNGGY-GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE-LPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~-~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~li~~~l   96 (135)
                      .-.+.||+||.+....... -..+|+||+++++||+.+..-||......+...+|.... -..+|...+.....++.-|+
T Consensus       347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icm  426 (448)
T KOG0195|consen  347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICM  426 (448)
T ss_pred             ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHh
Confidence            3367999999998753222 456999999999999999999999988877776665433 35678899999999999999


Q ss_pred             ccCCCCCCCHHHHh
Q 032711           97 QVNPNDRPTAAQLM  110 (135)
Q Consensus        97 ~~~p~~Rps~~~~l  110 (135)
                      +.||.+||.+..+.
T Consensus       427 nedpgkrpkfdmiv  440 (448)
T KOG0195|consen  427 NEDPGKRPKFDMIV  440 (448)
T ss_pred             cCCCCcCCCcceeh
Confidence            99999999987653

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.17  E-value=8.7e-11  Score=76.01  Aligned_cols=101  Identities=27%  Similarity=0.390  Sum_probs=76.1

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHHHcC----------------------
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIARG----------------------   75 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~-~~~~~~~~i~~~----------------------   75 (135)
                      +.+..|.-||.+..- ..|+..-|+||+||++..|.-.+.||+.. +..+++.+|.+-                      
T Consensus       193 VASRyfKGPELLVdy-~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~  271 (338)
T KOG0668|consen  193 VASRYFKGPELLVDY-QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFE  271 (338)
T ss_pred             eehhhcCCchheeec-hhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHh
Confidence            556788999988875 36899999999999999999998888643 334555444320                      


Q ss_pred             ----CCCC----------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           76 ----ELPP----------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        76 ----~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                          ....          ...-.++++.+|+.++|..|-.+|+++.+++.||||.....
T Consensus       272 ~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~  330 (338)
T KOG0668|consen  272 DILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVRE  330 (338)
T ss_pred             hHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHH
Confidence                0000          01124689999999999999999999999999999986443

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.10  E-value=1.7e-10  Score=81.67  Aligned_cols=94  Identities=21%  Similarity=0.379  Sum_probs=67.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      .-+||..||+||.+.++  .|+.++|||++|.+++|++.-   |... .....+.-+..+.+++.-..-.+....|+..+
T Consensus       421 ~~~gt~~YmsPEQi~g~--~y~~kvdIyaLGlil~EL~~~---f~T~~er~~t~~d~r~g~ip~~~~~d~p~e~~ll~~l  495 (516)
T KOG1033|consen  421 QQVGTLLYMSPEQIRGQ--QYSEKVDIYALGLILAELLIQ---FSTQFERIATLTDIRDGIIPPEFLQDYPEEYTLLQQL  495 (516)
T ss_pred             hcccccccCCHHHHhhh--hhhhhcchhhHHHHHHHHHHH---hccHHHHHHhhhhhhcCCCChHHhhcCcHHHHHHHHh
Confidence            45799999999999986  799999999999999999862   2221 22233334444544322222345667999999


Q ss_pred             cccCCCCCCCHHHHhhCcCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~  115 (135)
                      +...|.+||++...-.|.|.
T Consensus       496 ls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  496 LSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             cCCCcccCchHHHHhhhhhc
Confidence            99999999977666556554

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.09  E-value=8.3e-12  Score=91.60  Aligned_cols=106  Identities=20%  Similarity=0.261  Sum_probs=79.6

Q ss_pred             hhhhhcccccccccchhhhhccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHH-HHHc-------CCCCCCCC
Q 032711           12 ALRRKWHVSRWNSLTDQVVNSKNGGY-GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIAR-------GELPPIPD   82 (135)
Q Consensus        12 ~~~~~~~~gt~~~~aPE~~~~~~~~~-~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~-~i~~-------~~~~~~~~   82 (135)
                      ......++|+-.|+|||++...  .| ....|||+.|++++.|..|+.||......+..+ ....       .....+..
T Consensus       478 ~~~~~g~~gS~pY~apE~~~~~--~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  555 (601)
T KOG0590|consen  478 IHESSGIVGSDPYLAPEVLTGK--EYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLS  555 (601)
T ss_pred             hhhhcCcccCCcCcCccccccc--ccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHH
Confidence            3445567899999999999875  45 566999999999999999999986544332211 1100       01112334


Q ss_pred             cccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           83 SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        83 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      .++.+.+.++.++|+.+|.+|.+++++++.+|++.-.
T Consensus       556 ~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  556 LLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             hchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence            5778889999999999999999999999999998643

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.97  E-value=6.5e-10  Score=80.18  Aligned_cols=93  Identities=27%  Similarity=0.471  Sum_probs=76.7

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      |||..|||||++.    ++....|.|++|++.+++++|..||..    +....|.+... ..|..+...+.+++..++..
T Consensus       154 cgt~eymApEI~~----gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~-~~p~~l~~~a~~~~~~l~~r  224 (612)
T KOG0603|consen  154 CGTYEYRAPEIIN----GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAEL-EMPRELSAEARSLFRQLFKR  224 (612)
T ss_pred             ccchhhhhhHhhh----ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhcc-CCchhhhHHHHHHHHHHHhh
Confidence            8999999999997    367789999999999999999999987    45555554443 56777888999999999999


Q ss_pred             CCCCCCCH-----HHHhhCcCCCCCCC
Q 032711           99 NPNDRPTA-----AQLMEHPFVKRPLP  120 (135)
Q Consensus        99 ~p~~Rps~-----~~~l~~~~~~~~~~  120 (135)
                      +|.+|...     .++++|+||.....
T Consensus       225 ~p~nrLg~~~~~~~eik~h~f~~~i~~  251 (612)
T KOG0603|consen  225 NPENRLGAGPDGVDEIKQHEFFQSIDW  251 (612)
T ss_pred             CHHHHhccCcchhHHHhccchheeeeH
Confidence            99999754     57889999986544

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=98.90  E-value=6.8e-10  Score=81.04  Aligned_cols=47  Identities=23%  Similarity=0.323  Sum_probs=42.2

Q ss_pred             hhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 032711           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF   61 (135)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~   61 (135)
                      ...+++||..|.+||+++.. ..|+..+|.||+|+.+|++.+|..||.
T Consensus       179 ~~~S~vGT~~YLhPel~E~q-~~y~~tVDLWS~GvtlY~caTG~lPF~  225 (732)
T KOG4250|consen  179 LFTSLVGTEEYLHPELYERQ-KKYTATVDLWSFGVTLYECATGELPFI  225 (732)
T ss_pred             eeeeecCchhhcChHHHhhc-cCcCceeehhhhhhHHHHHhccCCCCC
Confidence            55678999999999999963 479999999999999999999999984

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=98.86  E-value=4.1e-09  Score=67.35  Aligned_cols=64  Identities=25%  Similarity=0.434  Sum_probs=50.0

Q ss_pred             ccccccccchhhhhcc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHcCCCCCCC
Q 032711           18 HVSRWNSLTDQVVNSK--NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WVQALFKIARGELPPIP   81 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~--~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~-~~~~~~~i~~~~~~~~~   81 (135)
                      ..|.-.|||||.+...  ..+|+.++||||+|+.+.||.+++.||..+. ..+++.++.....+.+|
T Consensus       208 daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~P~Lp  274 (282)
T KOG0984|consen  208 DAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPSPQLP  274 (282)
T ss_pred             hcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCCCCCc
Confidence            4677789999998753  2479999999999999999999999997754 45666666666554444

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.76  E-value=1.2e-08  Score=71.83  Aligned_cols=89  Identities=19%  Similarity=0.362  Sum_probs=57.5

Q ss_pred             ccccccccchhhhhccCCCCC-----chhhHHHHHHHHHHHHhCCC------------CCCC----CcHHHHHHH-H-Hc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYG-----LPADIWSVGCTVLEMLTRCR------------PYFG----VEWVQALFK-I-AR   74 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~-----~~~dvws~G~~l~~l~~g~~------------p~~~----~~~~~~~~~-i-~~   74 (135)
                      -+||..|||||++++.. .+.     ...|||++|.|+||++++..            ||..    ....+.++. + .+
T Consensus       378 qVGT~RYMAPEvLEgai-nl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~k  456 (534)
T KOG3653|consen  378 QVGTRRYMAPEVLEGAI-NLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRK  456 (534)
T ss_pred             hhhhhhhcCHHHHhhhc-ccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhh
Confidence            58999999999999852 333     35899999999999988533            2221    001112211 1 11


Q ss_pred             CCCCCCCCc-----ccHHHHHHHHHhcccCCCCCCCHH
Q 032711           75 GELPPIPDS-----VSRDARDFILKCLQVNPNDRPTAA  107 (135)
Q Consensus        75 ~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rps~~  107 (135)
                      ..-+.+++.     -...+.+.+..||..|++.|.+++
T Consensus       457 K~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  457 KQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             ccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence            112233322     234578889999999999999975

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.74  E-value=4.3e-08  Score=62.22  Aligned_cols=63  Identities=35%  Similarity=0.607  Sum_probs=54.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      ..+...|++||..... ..++.+.|+|++|++++++                                ..+.+++..|+.
T Consensus       153 ~~~~~~~~~pe~~~~~-~~~~~~~D~~~lg~~~~~l--------------------------------~~~~~~l~~~l~  199 (215)
T cd00180         153 IVGTPAYMAPEVLLGK-GYYSEKSDIWSLGVILYEL--------------------------------PELKDLIRKMLQ  199 (215)
T ss_pred             ccCCCCccChhHhccc-CCCCchhhhHHHHHHHHHH--------------------------------HHHHHHHHHHhh
Confidence            4577889999998763 2568889999999999998                                678999999999


Q ss_pred             cCCCCCCCHHHHhhCc
Q 032711           98 VNPNDRPTAAQLMEHP  113 (135)
Q Consensus        98 ~~p~~Rps~~~~l~~~  113 (135)
                      .+|.+|+++.+++.++
T Consensus       200 ~~p~~R~~~~~l~~~~  215 (215)
T cd00180         200 KDPEKRPSAKEILEHL  215 (215)
T ss_pred             CCcccCcCHHHHhhCC
Confidence            9999999999998764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.68  E-value=4e-08  Score=75.05  Aligned_cols=108  Identities=26%  Similarity=0.356  Sum_probs=88.9

Q ss_pred             hhhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--CCCCCcccHHHHH
Q 032711           13 LRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--PPIPDSVSRDARD   90 (135)
Q Consensus        13 ~~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~   90 (135)
                      .....++||+.|.+||..++.  .....+|.|+.|+++++.++|.+||........+..|.....  +..+...+.++.+
T Consensus       990 ~~~~~~~~t~~~laPe~~lg~--~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~ 1067 (1205)
T KOG0606|consen  990 RRKHAVVGTPDYLAPEILLGR--RHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQD 1067 (1205)
T ss_pred             hccccccCCCcccCCcccccc--cCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhh
Confidence            334457899999999999986  678889999999999999999999999888888777765544  2335567889999


Q ss_pred             HHHHhcccCCCCCCCHH---HHhhCcCCCCCCCCC
Q 032711           91 FILKCLQVNPNDRPTAA---QLMEHPFVKRPLPTS  122 (135)
Q Consensus        91 li~~~l~~~p~~Rps~~---~~l~~~~~~~~~~~~  122 (135)
                      ++.+.+..++.+|..+.   ++..|+||+.....+
T Consensus      1068 ~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~ 1102 (1205)
T KOG0606|consen 1068 LINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWEN 1102 (1205)
T ss_pred             hhhhhhccCchhccCcccccccccCCccCCCCccc
Confidence            99999999999998776   788899998755443

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.61  E-value=1.3e-07  Score=66.41  Aligned_cols=95  Identities=24%  Similarity=0.393  Sum_probs=60.1

Q ss_pred             cccccccccchhhhhccC--CCC-C-chhhHHHHHHHHHHHHhC----------CCCCCCC----cHHHHHHH-HHcCCC
Q 032711           17 WHVSRWNSLTDQVVNSKN--GGY-G-LPADIWSVGCTVLEMLTR----------CRPYFGV----EWVQALFK-IARGEL   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~--~~~-~-~~~dvws~G~~l~~l~~g----------~~p~~~~----~~~~~~~~-i~~~~~   77 (135)
                      ..+||-.|||||++...-  ..+ . ..+|||++|.|+||++.+          +.||.+.    ...+.+.. ++-...
T Consensus       379 ~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~  458 (513)
T KOG2052|consen  379 PRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKL  458 (513)
T ss_pred             CccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeeccc
Confidence            458999999999997531  012 2 238999999999998762          3566432    12233322 222222


Q ss_pred             -CCCCCcc-----cHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           78 -PPIPDSV-----SRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        78 -~~~~~~~-----~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                       +.+|...     -..+..+|..||..+|.-|.++-.+.+
T Consensus       459 RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK  498 (513)
T KOG2052|consen  459 RPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK  498 (513)
T ss_pred             CCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence             2233222     245678899999999999998866643

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.59  E-value=1.8e-07  Score=60.35  Aligned_cols=61  Identities=26%  Similarity=0.280  Sum_probs=46.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CcHH-HHHHHHHcCCCC
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWV-QALFKIARGELP   78 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~-~~~~-~~~~~i~~~~~~   78 (135)
                      ...++..|++||.+. ....++.++|+|++|++++++++|+.||.. .+.. .....+..+...
T Consensus       158 ~~~~~~~~~~pe~~~-~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  220 (225)
T smart00221      158 TVKGTPFYLAPEVLL-GGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGVPL  220 (225)
T ss_pred             ceeccCCcCCHhHhc-CCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCCcc
Confidence            456788899999984 223677899999999999999999999977 4444 555566655543

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.56  E-value=5e-08  Score=75.02  Aligned_cols=89  Identities=19%  Similarity=0.273  Sum_probs=59.1

Q ss_pred             ccccccchhhhhccC---------CCCCchhhHHHHHHHHHHHHhC-CCCCCCCcHHHHHHHHHcCC-CC---CCCCccc
Q 032711           20 SRWNSLTDQVVNSKN---------GGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGE-LP---PIPDSVS   85 (135)
Q Consensus        20 gt~~~~aPE~~~~~~---------~~~~~~~dvws~G~~l~~l~~g-~~p~~~~~~~~~~~~i~~~~-~~---~~~~~~~   85 (135)
                      -.-+|+|||.+....         ...+++.||||+||++.|+++. .++|. ..   ++..-.++. ..   -+..-..
T Consensus       189 RRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~-LS---QL~aYr~~~~~~~e~~Le~Ied  264 (1431)
T KOG1240|consen  189 RRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT-LS---QLLAYRSGNADDPEQLLEKIED  264 (1431)
T ss_pred             ceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc-HH---HHHhHhccCccCHHHHHHhCcC
Confidence            345799999887621         1267899999999999999884 55552 11   111111110 00   0001123


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhhC
Q 032711           86 RDARDFILKCLQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        86 ~~~~~li~~~l~~~p~~Rps~~~~l~~  112 (135)
                      +..++++..|++.||.+|.++++.|+.
T Consensus       265 ~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  265 VSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             ccHHHHHHHHHccCchhccCHHHHHHh
Confidence            468999999999999999999998864

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.43  E-value=1e-06  Score=63.28  Aligned_cols=91  Identities=18%  Similarity=0.311  Sum_probs=65.8

Q ss_pred             cccccchhhhhccC-CC----CCchhhHHHHHHHHHHHHhCCCCCCCC----cHHHHHHHHHc-CCCCCCCC-----ccc
Q 032711           21 RWNSLTDQVVNSKN-GG----YGLPADIWSVGCTVLEMLTRCRPYFGV----EWVQALFKIAR-GELPPIPD-----SVS   85 (135)
Q Consensus        21 t~~~~aPE~~~~~~-~~----~~~~~dvws~G~~l~~l~~g~~p~~~~----~~~~~~~~i~~-~~~~~~~~-----~~~   85 (135)
                      ...|.|||.+.... ..    .+.+.|+||+|++++|++..+.||...    ...+.+.++.+ +.....|.     ...
T Consensus       114 ~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~  193 (484)
T KOG1023|consen  114 ALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELP  193 (484)
T ss_pred             HHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcc
Confidence            34689999998741 11    367799999999999999999998653    22355666655 33222221     344


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           86 RDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        86 ~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      ++...++..||..+|.+||++.++..
T Consensus       194 ~~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  194 PELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             hHHHHHHHHhcccChhhCccHHHHHh
Confidence            57888999999999999999988753

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.30  E-value=2.4e-07  Score=62.48  Aligned_cols=78  Identities=18%  Similarity=0.201  Sum_probs=50.2

Q ss_pred             cccccchhhhhcc------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           21 RWNSLTDQVVNSK------NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        21 t~~~~aPE~~~~~------~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      +..|.+||.....      ...++.+.|.|.+|+++|.++++..||...........    .+.... .++...+.+|..
T Consensus       205 ~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~----~f~~C~-~~Pe~v~~LI~~  279 (288)
T PF14531_consen  205 PVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW----DFSRCR-DMPEPVQFLIRG  279 (288)
T ss_dssp             -TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG----GGTTSS----HHHHHHHHH
T ss_pred             CcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc----cchhcC-CcCHHHHHHHHH
Confidence            4678999977552      12478999999999999999999999865432111100    122233 688899999999


Q ss_pred             hcccCCCCC
Q 032711           95 CLQVNPNDR  103 (135)
Q Consensus        95 ~l~~~p~~R  103 (135)
                      +|+.+|.+|
T Consensus       280 lL~~~~~~R  288 (288)
T PF14531_consen  280 LLQRNPEDR  288 (288)
T ss_dssp             HT-SSGGGS
T ss_pred             HccCCcccC
Confidence            999999877

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.22  E-value=2.6e-05  Score=52.35  Aligned_cols=103  Identities=25%  Similarity=0.336  Sum_probs=73.1

Q ss_pred             hhcccccccccchhhhhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHcCCCC--C--CCCcc-
Q 032711           15 RKWHVSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVEW----VQALFKIARGELP--P--IPDSV-   84 (135)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~-~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~----~~~~~~i~~~~~~--~--~~~~~-   84 (135)
                      ....+|+..|++||.+.... ..+....|+|++|+++++++.|..||.....    ......+......  .  ..... 
T Consensus       165 ~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (384)
T COG0515         165 PSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNP  244 (384)
T ss_pred             ccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCcccc
Confidence            35678999999999998731 3578899999999999999999999766552    2333333333221  1  11111 


Q ss_pred             ---cHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           85 ---SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        85 ---~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                         .....+++.+++..+|..|.+..+...+.+...
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  280 (384)
T COG0515         245 ELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAH  280 (384)
T ss_pred             chhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhC
Confidence               257889999999999999999887776654443

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.14  E-value=6e-06  Score=57.98  Aligned_cols=89  Identities=19%  Similarity=0.368  Sum_probs=65.5

Q ss_pred             cccccccchhhhhccCCC---C-CchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHH-HHcCCCCCCCCcccHHHHHHHH
Q 032711           19 VSRWNSLTDQVVNSKNGG---Y-GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFK-IARGELPPIPDSVSRDARDFIL   93 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~---~-~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~li~   93 (135)
                      .|...-||||+.....+.   . -.++|.|+.|.+.||++...-||.+......-.+ -.....+..+..+++.+.+++.
T Consensus       412 GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~  491 (598)
T KOG4158|consen  412 GGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVF  491 (598)
T ss_pred             CCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHH
Confidence            466778999988753221   1 3579999999999999999889866432211111 1223446778999999999999


Q ss_pred             HhcccCCCCCCCHH
Q 032711           94 KCLQVNPNDRPTAA  107 (135)
Q Consensus        94 ~~l~~~p~~Rps~~  107 (135)
                      .+|+.+|++|++..
T Consensus       492 ~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  492 DLLKRDPSKRVSPN  505 (598)
T ss_pred             HHhcCCccccCCcc
Confidence            99999999999853

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=98.02  E-value=3.3e-06  Score=56.44  Aligned_cols=102  Identities=18%  Similarity=0.156  Sum_probs=67.0

Q ss_pred             hhhhhhhhhhhhccc----ccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHH
Q 032711            5 TVEGLGNALRRKWHV----SRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW----VQALFKIA   73 (135)
Q Consensus         5 ~~~~~~~~~~~~~~~----gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~----~~~~~~i~   73 (135)
                      +++++|......+.+    -+..|-+||++.-.   .-...+..|+|.+|++++.+++|+.||.....    .-...+..
T Consensus       163 KlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~  242 (378)
T KOG1345|consen  163 KLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWL  242 (378)
T ss_pred             EeeecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHh
Confidence            355666555544322    24578899977632   11347889999999999999999999975322    22223333


Q ss_pred             cCCCCCCC---CcccHHHHHHHHHhcccCCCCCCCH
Q 032711           74 RGELPPIP---DSVSRDARDFILKCLQVNPNDRPTA  106 (135)
Q Consensus        74 ~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~  106 (135)
                      .+..+..|   ..++..+..+..+.+..+++.|-..
T Consensus       243 ~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki  278 (378)
T KOG1345|consen  243 KRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKI  278 (378)
T ss_pred             cccCccCchhhcccCHHHHHHHHHhcCCcccccchh
Confidence            34333333   3467788888899999999888443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.97  E-value=1e-06  Score=65.30  Aligned_cols=100  Identities=20%  Similarity=0.190  Sum_probs=77.0

Q ss_pred             cccc-cccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHH-HHHHcCC---CCCCCCcccHHHHHH
Q 032711           17 WHVS-RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQAL-FKIARGE---LPPIPDSVSRDARDF   91 (135)
Q Consensus        17 ~~~g-t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~-~~i~~~~---~~~~~~~~~~~~~~l   91 (135)
                      ..+| ++.|+|||...+. .......|+||.|+++..+.+|..|+......... .......   .......+.....++
T Consensus       187 ~~~g~s~~y~a~E~~~~~-~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (601)
T KOG0590|consen  187 DRCGSSPPYGAPEHLSGK-AYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDL  265 (601)
T ss_pred             cccCCCCCCCCcccccch-hhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhc
Confidence            4578 9999999999875 24578899999999999999999988654433221 1111111   123456678888999


Q ss_pred             HHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           92 ILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      +.+++..++..|.+.+++..++|+..
T Consensus       266 l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  266 LHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             ccccccCCchhccccccccccccccc
Confidence            99999999999999999999999988

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=97.85  E-value=3.4e-06  Score=61.41  Aligned_cols=45  Identities=22%  Similarity=0.505  Sum_probs=38.1

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF   61 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~   61 (135)
                      ..++||..|-|||++.+. ...+...|||++|+++|.+....-||.
T Consensus       726 d~f~gtv~~aapevl~g~-~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  726 DVFVGTVDYAAPEVLGGE-KYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             ceeeeeccccchhhhCCC-ccCCCcchhhhhhheeeEEEeccCCCc
Confidence            457999999999999986 344778999999999999888777764

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.33  E-value=0.00016  Score=49.91  Aligned_cols=88  Identities=25%  Similarity=0.254  Sum_probs=57.7

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW----VQALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      .|-++|.+||.-...  ..+..+|||++|+...+|.-+..--.+...    .+.+.....+       .....-+.++.+
T Consensus       243 ~~~~g~~a~~sg~~t--n~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~-------len~lqr~~i~k  313 (458)
T KOG1266|consen  243 TSLPGFSAPESGTTT--NTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIG-------LENGLQRGSITK  313 (458)
T ss_pred             ccCCccccCCcCccc--ccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheee-------ccCccccCcCcc
Confidence            355778888876654  467789999999999998776442221111    1111111100       112223678899


Q ss_pred             hcccCCCCCCCHHHHhhCcCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~  115 (135)
                      |++..|..||++.+++.||++
T Consensus       314 cl~~eP~~rp~ar~llfHpll  334 (458)
T KOG1266|consen  314 CLEGEPNGRPDARLLLFHPLL  334 (458)
T ss_pred             cccCCCCCCcchhhhhcCcee
Confidence            999999999999999999854

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.26  E-value=5.5e-05  Score=56.16  Aligned_cols=99  Identities=16%  Similarity=0.166  Sum_probs=69.8

Q ss_pred             cccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHH-HHHHcC--CCCCCCCcccHHHHHHHHHhc
Q 032711           21 RWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQAL-FKIARG--ELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        21 t~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~-~~i~~~--~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...|.|||.+...  ..+.++|++|+|+.+|.+.. |+.-+...+..... ......  ........++.++.+-+.+++
T Consensus       172 ~~~f~apE~~~~~--~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l  249 (700)
T KOG2137|consen  172 HLNFLAPEYLLGT--TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLL  249 (700)
T ss_pred             Ccccccchhhccc--cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHh
Confidence            3479999999875  56889999999999998874 44444332211111 111111  112334678899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      ..+..-||++..+...+||.+....
T Consensus       250 ~~~~~~rp~~~~l~~~~ff~D~~~~  274 (700)
T KOG2137|consen  250 NGDSAVRPTLDLLLSIPFFSDPGLK  274 (700)
T ss_pred             cCCcccCcchhhhhcccccCCchhh
Confidence            9999999999999999999975543

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.04  E-value=0.047  Score=37.77  Aligned_cols=91  Identities=18%  Similarity=0.115  Sum_probs=62.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHH---HHHcCCCCC-CCCcccHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF---KIARGELPP-IPDSVSRDARDFI   92 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~---~i~~~~~~~-~~~~~~~~~~~li   92 (135)
                      .+.||..|.++.+-.+.  ..+.+.|+||++.++.++..|..||.+........   ......... .....+.....+.
T Consensus       196 ~~rGT~ry~S~~~H~~~--e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (322)
T KOG1164|consen  196 LFRGTLRYASINVHLGI--EQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKIL  273 (322)
T ss_pred             CCCCccccccHHHhCCC--ccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHH
Confidence            35699999999877664  57889999999999999999999997655322222   222111111 2334456667777


Q ss_pred             HHhcccCCCCCCCHHHH
Q 032711           93 LKCLQVNPNDRPTAAQL  109 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~  109 (135)
                      ..+-..+...+|.-..+
T Consensus       274 ~~~~~~~~~~~Pdy~~~  290 (322)
T KOG1164|consen  274 EYIDSLDYEDKPDYEKL  290 (322)
T ss_pred             HHhhccCCcCCCCHHHH
Confidence            66666788888876544

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=95.79  E-value=0.0068  Score=44.46  Aligned_cols=92  Identities=20%  Similarity=0.213  Sum_probs=63.7

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---cHHHHHHHHHcCCC-CCCCCcccHHHHHHHHH
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV---EWVQALFKIARGEL-PPIPDSVSRDARDFILK   94 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~---~~~~~~~~i~~~~~-~~~~~~~~~~~~~li~~   94 (135)
                      .|...|++||...+   .++...|++++|.+..+...+.......   .+..    +..... ...-..........+..
T Consensus       289 ~~~~~Y~~ke~~~~---l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~----~r~~~ip~e~~~~~s~~l~~~~~~  361 (524)
T KOG0601|consen  289 EGDCIYAAKELLNG---LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ----LRQGYIPLEFCEGGSSSLRSVTSQ  361 (524)
T ss_pred             CCCceEeChhhhcc---ccchHhhhcchhhhhHhhHhhcccccCCCCCCccc----cccccCchhhhcCcchhhhhHHHH
Confidence            56778999999976   4899999999999999988876544322   1111    111111 01112334455567888


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      ++..++..|++++.++.+.++..
T Consensus       362 ~~d~~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  362 MLDEDPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             hcCcchhhhhHHHHHhccccccc
Confidence            99999999999999999888774

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=93.40  E-value=0.059  Score=40.06  Aligned_cols=80  Identities=19%  Similarity=0.216  Sum_probs=50.9

Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC-----------CCcccHHHHHHHHHhcccCCCCCCC
Q 032711           37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI-----------PDSVSRDARDFILKCLQVNPNDRPT  105 (135)
Q Consensus        37 ~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rps  105 (135)
                      .++++|||++|.++.++.-|..-+......+....+.+-...+.           -..+......+..+|+...|..||.
T Consensus       108 ~~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l  187 (725)
T KOG1093|consen  108 IGPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPL  187 (725)
T ss_pred             CCcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccc
Confidence            35799999999999998777655444333333332222111110           1123455667778899999999998


Q ss_pred             HHHHhhCcCCC
Q 032711          106 AAQLMEHPFVK  116 (135)
Q Consensus       106 ~~~~l~~~~~~  116 (135)
                      ..++++++-|.
T Consensus       188 ~~~~~k~~i~~  198 (725)
T KOG1093|consen  188 PMELSKRCSFT  198 (725)
T ss_pred             hhHHhcCccHH
Confidence            77777777654

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=87.17  E-value=0.85  Score=33.46  Aligned_cols=91  Identities=15%  Similarity=0.209  Sum_probs=55.8

Q ss_pred             cccccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhC-CCCCCCCc-------HHH-HHHHH-----H-cC-CC
Q 032711           17 WHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTR-CRPYFGVE-------WVQ-ALFKI-----A-RG-EL   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g-~~p~~~~~-------~~~-~~~~i-----~-~~-~~   77 (135)
                      ..+|...|.+||.-.-.   +..-+...|.|.+|+++++++-| ..||.+-.       ..+ .+..-     . .+ ..
T Consensus       175 cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~  254 (637)
T COG4248         175 CPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGL  254 (637)
T ss_pred             cccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCC
Confidence            45889999999976521   11246778999999999999876 77886521       111 11110     0 00 01


Q ss_pred             CCC----C-CcccHHHHHHHHHhcccC--CCCCCCHH
Q 032711           78 PPI----P-DSVSRDARDFILKCLQVN--PNDRPTAA  107 (135)
Q Consensus        78 ~~~----~-~~~~~~~~~li~~~l~~~--p~~Rps~~  107 (135)
                      .+.    | ..+++.+..+..+|+...  +.-||+++
T Consensus       255 ~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~  291 (637)
T COG4248         255 KPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK  291 (637)
T ss_pred             CCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence            111    1 235677888877777443  56899875

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=82.44  E-value=2.4  Score=34.85  Aligned_cols=87  Identities=18%  Similarity=0.307  Sum_probs=56.1

Q ss_pred             ccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcccCCC
Q 032711           22 WNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN  101 (135)
Q Consensus        22 ~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~  101 (135)
                      ..+.++|....+........|+|.+|.....+..+...-....   ....+       .+........+...+|+.-+++
T Consensus       354 ~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~---~~~~~-------l~~~~~~~~~d~~~~~~~~~~~  423 (1351)
T KOG1035|consen  354 EIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSA---VPVSL-------LDVLSTSELLDALPKCLDEDSE  423 (1351)
T ss_pred             cccccccccccccchhhhhhHHHHHHHHHhhhhhcCccccccc---chhhh-------hccccchhhhhhhhhhcchhhh
Confidence            3466677666543233444799999999888877644321111   11111       1111112567788899999999


Q ss_pred             CCCCHHHHhhCcCCCCC
Q 032711          102 DRPTAAQLMEHPFVKRP  118 (135)
Q Consensus       102 ~Rps~~~~l~~~~~~~~  118 (135)
                      +|.++.+++.|+|.+-.
T Consensus       424 ~Rl~~~~ll~~~f~~~~  440 (1351)
T KOG1035|consen  424 ERLSALELLTHPFLRFP  440 (1351)
T ss_pred             hccchhhhhhchhcccc
Confidence            99999999999988753

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=80.49  E-value=0.11  Score=39.46  Aligned_cols=45  Identities=13%  Similarity=0.149  Sum_probs=36.2

Q ss_pred             hhhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 032711           14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPY   60 (135)
Q Consensus        14 ~~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~   60 (135)
                      ..++..+++.++|||+...+  .+....|+|+.+.-..++..|.+|-
T Consensus       386 ~~~t~~~~~~~~~pev~~~~--~~~~~p~~~~~~~~~~~~ap~~pPr  430 (829)
T KOG0576|consen  386 KPRTAIGTPEPLAPEVIQEN--TIDGCPDSGSLAVSAIQMAPGLPPR  430 (829)
T ss_pred             ccccCCCCCCCCCchhhccc--ccccCCCccCCCcchhhcCCCCCCC
Confidence            34567899999999999874  7899999999998777777666554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	135
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		6e-14
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		7e-14
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		4e-12
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		5e-12
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		1e-11
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		1e-11
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-11
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-11
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		3e-11
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		3e-11
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		1e-10
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		3e-10
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		4e-10
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		4e-10
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		6e-10
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		6e-10
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-09
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-09
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-09
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-09
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		2e-09
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		4e-09
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		6e-09
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		6e-09
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		7e-09
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		8e-09
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		9e-09
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		9e-09
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		9e-09
4fie_A	423	Full-Length Human Pak4 Length = 423		9e-09
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		9e-09
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		1e-08
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-08
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-08
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-08
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-08
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		2e-08
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		5e-08
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		7e-08
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		8e-08
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		8e-08
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		1e-07
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		1e-07
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		1e-07
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-07
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		2e-07
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		2e-07
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-07
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-07
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		2e-07
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		2e-07
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-07
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-07
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		2e-07
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		2e-07
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-07
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-07
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-07
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-07
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		2e-07
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		2e-07
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-07
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		2e-07
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-07
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-07
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		2e-07
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-07
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-07
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-07
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		2e-07
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-07
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-07
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		2e-07
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-07
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-07
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		3e-07
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-07
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		3e-07
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		4e-07
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		4e-07
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		4e-07
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		4e-07
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		7e-07
3soa_A	444	Full-Length Human Camkii Length = 444		1e-06
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		2e-06
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-06
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		2e-06
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		2e-06
4exu_A	371	Mapk13, Inactive Form Length = 371		2e-06
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		2e-06
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		3e-06
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		3e-06
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		4e-06
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		4e-06
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		4e-06
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		4e-06
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		4e-06
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		4e-06
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		4e-06
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		5e-06
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		5e-06
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		6e-06
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		6e-06
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		6e-06
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		6e-06
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		7e-06
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		7e-06
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		8e-06
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		8e-06
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		8e-06
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		8e-06
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		8e-06
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		9e-06
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		1e-05
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-05
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-05
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		1e-05
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		1e-05
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-05
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-05
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-05
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-05
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-05
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-05
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-05
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-05
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		1e-05
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		1e-05
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		1e-05
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		1e-05
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		1e-05
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-05
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		1e-05
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-05
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-05
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		1e-05
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-05
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-05
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-05
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-05
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		1e-05
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-05
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-05
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-05
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-05
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-05
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-05
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-05
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-05
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-05
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		1e-05
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		2e-05
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		2e-05
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		2e-05
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		2e-05
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		2e-05
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		2e-05
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		2e-05
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		2e-05
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		2e-05
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		2e-05
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		2e-05
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		2e-05
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		2e-05
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		2e-05
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		2e-05
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		2e-05
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		2e-05
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		2e-05
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		2e-05
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		2e-05
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-05
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		2e-05
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		2e-05
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		2e-05
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		2e-05
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		2e-05
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-05
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-05
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		3e-05
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		3e-05
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		3e-05
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		3e-05
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		3e-05
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		3e-05
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		3e-05
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		3e-05
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		3e-05
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		4e-05
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		4e-05
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		4e-05
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		4e-05
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		4e-05
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		4e-05
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		4e-05
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		4e-05
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		4e-05
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		4e-05
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		4e-05
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		4e-05
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		4e-05
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		4e-05
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		4e-05
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		5e-05
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		5e-05
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		5e-05
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		5e-05
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		5e-05
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		5e-05
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		5e-05
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		5e-05
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		5e-05
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		5e-05
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		5e-05
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		5e-05
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		5e-05
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		5e-05
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		5e-05
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		5e-05
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		5e-05
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		5e-05
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		5e-05
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		5e-05
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		6e-05
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		6e-05
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		6e-05
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		6e-05
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		6e-05
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		7e-05
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		7e-05
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		7e-05
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		8e-05
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		8e-05
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		8e-05
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		8e-05
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		8e-05
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		8e-05
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		8e-05
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		8e-05
3gni_B	389	Structure Of Strad And Mo25 Length = 389		1e-04
2wtk_B	373	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		1e-04
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-04
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-04
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-04
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		2e-04
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-04
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-04
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-04
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		2e-04
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-04
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		2e-04
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		3e-04
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		3e-04
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		3e-04
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		3e-04
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		3e-04
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		3e-04
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-04
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-04
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		4e-04
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		4e-04
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		4e-04
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		4e-04
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		4e-04
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		4e-04
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		4e-04
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		4e-04
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		4e-04
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		4e-04
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		4e-04
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		4e-04
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		4e-04
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		4e-04
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-04
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		4e-04
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		4e-04
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		4e-04
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		4e-04
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		4e-04
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		4e-04
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		4e-04
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		4e-04
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		4e-04
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		4e-04
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		4e-04
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		4e-04
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		4e-04
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		4e-04
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		4e-04
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-04
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		4e-04
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		4e-04
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		4e-04
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		4e-04
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		4e-04
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-04
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		4e-04
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		4e-04
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		5e-04
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		5e-04
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		5e-04
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		5e-04
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		5e-04
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		5e-04
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		5e-04
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		5e-04
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		5e-04
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		5e-04
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		5e-04
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		5e-04
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		5e-04
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		5e-04
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		5e-04
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		5e-04
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		5e-04
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		5e-04
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		5e-04
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		5e-04
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		5e-04
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		5e-04
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		5e-04
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		5e-04
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		5e-04
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		5e-04
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-04
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-04
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		5e-04
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		6e-04
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		6e-04
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		6e-04
4ae6_A	343	Structure And Function Of The Human Sperm-specific		6e-04
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		6e-04
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		6e-04
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		6e-04
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		6e-04
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		6e-04
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		6e-04
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		6e-04
4ae9_A	343	Structure And Function Of The Human Sperm-specific		6e-04
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		6e-04
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		6e-04
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		6e-04
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		6e-04
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		6e-04
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		6e-04
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		6e-04
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		6e-04
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		6e-04
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		7e-04
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		7e-04
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		7e-04
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		7e-04
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		7e-04
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		7e-04
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		7e-04
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		8e-04
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		8e-04
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		8e-04
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		8e-04
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		8e-04
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		9e-04
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		9e-04
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		9e-04
2pl0_A	289	Lck Bound To Imatinib Length = 289		9e-04

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIARGEL-PPIPDSVS 85
           ++++    GYG  ADIWS+GCT++EM T   P++ + E   A+FK+   ++ P IP+S+S
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMS 252
Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
            +A+ FILKC + +P+ R  A  L+   F+K
Sbjct: 253 AEAKAFILKCFEPDPDKRACANDLLVDEFLK 283

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIARGEL-PPIPDSVS 85
           ++++    GYG  ADIWS+GCT++EM T   P++ + E   A+FK+   ++ P IP+S+S
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMS 238
Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
            +A+ FILKC + +P+ R  A  L+   F+K
Sbjct: 239 AEAKAFILKCFEPDPDKRACANDLLVDEFLK 269

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDARD 90
           K+  Y   ADIWS+G T++EM     P+  +  ++ L KIA+ + P +  P   S + RD
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRD 254
Query: 91  FILKCLQVNPNDRPTAAQLMEHPFV 115
           F+   L  NP  RP+AAQL+EHPFV
Sbjct: 255 FLKIALDKNPETRPSAAQLLEHPFV 279

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDARD 90
           K+  Y   ADIWS+G T++EM     P+  +  ++ L KIA+ + P +  P   S + RD
Sbjct: 187 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRD 246
Query: 91  FILKCLQVNPNDRPTAAQLMEHPFV 115
           F+   L  NP  RP+AAQL+EHPFV
Sbjct: 247 FLKIALDKNPETRPSAAQLLEHPFV 271

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV-SRD 87
           ++    G Y    D+WS+G T +E+  R  P F +  + AL+ IA+ E P +     S  
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEY 242
Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 120
            R+F+  CLQ  P DRPT+  L++H FV R  P
Sbjct: 243 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 275

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV-SRD 87
           ++    G Y    D+WS+G T +E+  R  P F +  + AL+ IA+ E P +     S  
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEY 281
Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 120
            R+F+  CLQ  P DRPT+  L++H FV R  P
Sbjct: 282 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 314

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 32  SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDAR 89
           SK+  Y   AD+WS+G T++EM     P+  +  ++ L KIA+ E P +  P   S + +
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK 271
Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFV 115
           DF+ KCL+ N + R T +QL++HPFV
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFV 297

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 32  SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDAR 89
           SK+  Y   AD+WS+G T++EM     P+  +  ++ L KIA+ E P +  P   S + +
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK 271
Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFV 115
           DF+ KCL+ N + R T +QL++HPFV
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFV 297

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 32  SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDAR 89
           SK+  Y   AD+WS+G T++EM     P+  +  ++ L KIA+ E P +  P   S + +
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK 271
Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFV 115
           DF+ KCL+ N + R T +QL++HPFV
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFV 297

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDARDFIL 93
           GY   ADIWS+G T +EM     PY  +  ++A+F I     P    P+  S +  DF+ 
Sbjct: 201 GYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVK 260
Query: 94  KCLQVNPNDRPTAAQLMEHPFVK 116
           +CL  +P  R TA QL++HPFV+
Sbjct: 261 QCLVKSPEQRATATQLLQHPFVR 283

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVS 85
           +VV  K   YG   DIWS+G   +EM+    PY     ++AL+ IA    P +  P+ +S
Sbjct: 186 EVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 243
Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 126
              RDF+ +CL+++   R +A +L++H F+K   P S   P
Sbjct: 244 AIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTP 284

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVS 85
           +VV  K   YG   DIWS+G   +EM+    PY     ++AL+ IA    P +  P+ +S
Sbjct: 187 EVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 244
Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 126
              RDF+ +CL+++   R +A +L++H F+K   P S   P
Sbjct: 245 AIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTP 285

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVS 85
           +VV  K   YG   DIWS+G   +EM+    PY     ++AL+ IA    P +  P+ +S
Sbjct: 187 EVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 244
Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 126
              RDF+ +CL+++   R +A +L++H F+K   P S   P
Sbjct: 245 AIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTP 285

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVS 85
           +VV  K   YG   DIWS+G   +EM+    PY     ++AL+ IA    P +  P+ +S
Sbjct: 186 EVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 243
Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 126
              RDF+ +CL ++   R +A +L++H F+K   P S   P
Sbjct: 244 AIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTP 284

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVS 85
           +VV  K   YG   DIWS+G   +EM+    PY     ++AL+ IA    P +  P+ +S
Sbjct: 186 EVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 243
Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 126
              RDF+ +CL ++   R +A +L++H F+K   P S   P
Sbjct: 244 AIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTP 284

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           K   Y   ADIWS+G T +E+     P+  +  ++ LF I +   P +  + S+  ++F+
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 251
Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKR 117
             CL   P+ RPTA +L++H F+ R
Sbjct: 252 EACLNKEPSFRPTAKELLKHKFILR 276

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           K   Y   ADIWS+G T +E+     P+  +  ++ LF I +   P +  + S+  ++F+
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 236
Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKR 117
             CL   P+ RPTA +L++H F+ R
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFILR 261

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           K   Y   ADIWS+G T +E+     P+  +  ++ LF I +   P +  + S+  ++F+
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 236
Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKR 117
             CL   P+ RPTA +L++H F+ R
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFILR 261

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           K   Y   ADIWS+G T +E+     P+  +  ++ LF I +   P +  + S+  ++F+
Sbjct: 197 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 256
Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKR 117
             CL   P+ RPTA +L++H F+ R
Sbjct: 257 EACLNKEPSFRPTAKELLKHKFILR 281

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           K   Y   ADIWS+G T +E+     P   +  ++ LF I +   P +    S+  ++F+
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFV 248
Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKR 117
             CL  +P  RPTA +L++H F+ R
Sbjct: 249 EACLNKDPRFRPTAKELLKHKFITR 273

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP-IPD--SVSRDARDFIL 93
           YG   DIWS+G  V+EM+    PYF    +QA+ +I R  LPP + D   VS   R F+ 
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI-RDSLPPRVKDLHKVSSVLRGFLD 276
Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 126
             L   P+ R TA +L+ HPF+K   P S  +P
Sbjct: 277 LMLVREPSQRATAQELLGHPFLKLAGPPSCIVP 309

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDS--VSRDARDFILK 94
           Y    DIWS+G  V+EM+    PYF    VQA+ ++     P + +S  VS   RDF+ +
Sbjct: 218 YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLER 277
Query: 95  CLQVNPNDRPTAAQLMEHPFV 115
            L  +P +R TA +L++HPF+
Sbjct: 278 MLVRDPQERATAQELLDHPFL 298

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV-SRDARDFI 92
           +  Y   +D+WS+G T +EM     P   +  ++ALF I R   P +     S+  + FI
Sbjct: 208 DATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFI 267
Query: 93  LKCLQVNPNDRPTAAQLMEHPFVK 116
             CL  N + RP   QLM+HPF++
Sbjct: 268 ESCLVKNHSQRPATEQLMKHPFIR 291

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPY--FGVEWVQALFKIARGELPPIP-DSVSRDARDFI 92
           GY + +DIWS+G T++E+     PY  +G  + Q L ++     P +P D  S +  DF 
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPF-QQLKQVVEEPSPQLPADKFSAEFVDFT 291
Query: 93  LKCLQVNPNDRPTAAQLMEHPF 114
            +CL+ N  +RPT  +LM+HPF
Sbjct: 292 SQCLKKNSKERPTYPELMQHPF 313

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVS---------R 86
           GY   ADIWS G T +E+ T   PY     ++ L    + + P +   V          +
Sbjct: 203 GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK 262
Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
             R  I  CLQ +P  RPTAA+L+ H F ++
Sbjct: 263 SFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVS---------R 86
           GY   ADIWS G T +E+ T   PY     ++ L    + + P +   V          +
Sbjct: 198 GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK 257
Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
             R  I  CLQ +P  RPTAA+L+ H F ++
Sbjct: 258 SFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDS---VSRDARDFIL 93
           YG   DIWS+G  V+EM+    PYF    ++A+ K+ R  LPP   +   VS   + F+ 
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLD 305
Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 126
           + L  +P  R TAA+L++HPF+ +  P +  +P
Sbjct: 306 RLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 338

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           +   Y   ADIWS+G T +E+     P   +  ++ LF I +   P +    ++  ++FI
Sbjct: 193 QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFI 252
Query: 93  LKCLQVNPNDRPTAAQLMEHPF-VKRPLPTSW 123
             CL  +P+ RPTA +L++H F VK    TS+
Sbjct: 253 DACLNKDPSFRPTAKELLKHKFIVKNSKKTSY 284

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDS---VSRDARDFIL 93
           YG   DIWS+G  V+EM+    PYF    ++A+ K+ R  LPP   +   VS   + F+ 
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLD 382
Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 126
           + L  +P  R TAA+L++HPF+ +  P +  +P
Sbjct: 383 RLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 415

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPY--FGVEWVQALFKIARGELPPIP-DSVSRDARDFI 92
           GY + +DIWS+G T++E+     PY  +G  + Q L ++     P +P D  S +  DF 
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPYDSWGTPF-QQLKQVVEEPSPQLPADKFSAEFVDFT 247
Query: 93  LKCLQVNPNDRPTAAQLMEHPF 114
            +CL+ N  +RPT  +LM+HPF
Sbjct: 248 SQCLKKNSKERPTYPELMQHPF 269

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDS---VSRDARDFIL 93
           YG   DIWS+G  V+EM+    PYF    ++A+ K+ R  LPP   +   VS   + F+ 
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLD 262
Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 126
           + L  +P  R TAA+L++HPF+ +  P +  +P
Sbjct: 263 RLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 295

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDS---VSRDARDFIL 93
           YG   DIWS+G  V+EM+    PYF    ++A+ K+ R  LPP   +   VS   + F+ 
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLD 255
Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 126
           + L  +P  R TAA+L++HPF+ +  P +  +P
Sbjct: 256 RLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 288

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDS---VSRDARDFIL 93
           YG   DIWS+G  V+EM+    PYF    ++A+ K+ R  LPP   +   VS   + F+ 
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLD 260
Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 126
           + L  +P  R TAA+L++HPF+ +  P +  +P
Sbjct: 261 RLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 293

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDS---VSRDARDFIL 93
           YG   DIWS+G  V+EM+    PYF    ++A+ K+ R  LPP   +   VS   + F+ 
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLD 251
Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 126
           + L  +P  R TAA+L++HPF+ +  P +  +P
Sbjct: 252 RLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 284

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP---PIPDSVSRDARDF 91
           G Y    D+WS G  +  +L+   P++G      L ++  G+     P   ++S DA+D 
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVKR---PLPTSWGLPT 127
           I K L  +P+ R TA Q +EHP++++     PT   LP+
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPS 295

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 41/85 (48%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           +N  Y   +DIW++GC + E+ T    +        + KI  G  PP+    S D R  +
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLV 257
Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKR 117
            +  + NP DRP+   ++E  F+ +
Sbjct: 258 SQLFKRNPRDRPSVNSILEKGFIAK 282

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQ-ALFKIARGELPPIPDSVSRDARDFILK 94
            +GL +D+WS+GC    +L   RP F  + V+  L K+   +   +P  +S +A+D I +
Sbjct: 188 AHGLESDVWSLGCMFYTLLI-GRPPFDTDTVKNTLNKVVLADYE-MPSFLSIEAKDLIHQ 245
Query: 95  CLQVNPNDRPTAAQLMEHPFVKRPLPT 121
            L+ NP DR + + +++HPF+ R   T
Sbjct: 246 LLRRNPADRLSLSSVLDHPFMSRNSST 272

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR---GELPP-IPDSV-SRDARDF 91
           Y + +DIWS+G +++EM     P        A+F++      E PP +P  V S + +DF
Sbjct: 199 YSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 258
Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVKR 117
           + KCL  NP +R    QLM H F+KR
Sbjct: 259 VNKCLIKNPAERADLKQLMVHAFIKR 284

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPY--FGVEWVQALFKIARGELPPIP-DSVSRDARDFI 92
           GY + +DIWS+G T +E+     PY  +G  + Q L ++     P +P D  S +  DF 
Sbjct: 216 GYSVKSDIWSLGITXIELAILRFPYDSWGTPF-QQLKQVVEEPSPQLPADKFSAEFVDFT 274
Query: 93  LKCLQVNPNDRPTAAQLMEHPF 114
            +CL+ N  +RPT  +L +HPF
Sbjct: 275 SQCLKKNSKERPTYPELXQHPF 296

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV-SRDARDFILKC 95
           Y + +DIWS+G +++EM     P   +   + L  I     P +P +V S + +DF+ KC
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKC 242
Query: 96  LQVNPNDRPTAAQLMEHPFVKR 117
           L  NP +R    QLM H F+KR
Sbjct: 243 LIKNPAERADLKQLMVHAFIKR 264

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ 97
           G   DIWS G  +  +L    P F  E V  LFK  RG +  IP+ ++R     ++  LQ
Sbjct: 189 GPEVDIWSCGVILYALLCGTLP-FDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQ 247
Query: 98  VNPNDRPTAAQLMEHPFVKRPLPT 121
           V+P  R T   + EH + K+ LP+
Sbjct: 248 VDPLKRATIKDIREHEWFKQDLPS 271

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ 97
           G   DIWS G  +  +L    P F  E V  LFK  RG +  IP+ ++R     ++  LQ
Sbjct: 189 GPEVDIWSCGVILYALLCGTLP-FDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQ 247
Query: 98  VNPNDRPTAAQLMEHPFVKRPLPT 121
           V+P  R T   + EH + K+ LP+
Sbjct: 248 VDPLKRATIKDIREHEWFKQDLPS 271

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-PIPD--SVSRDARDF 91
           G Y    D+WS G  +  +L+   P++G      L ++  G+    +P   ++S DA+D 
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVKR 117
           I K L  +P+ R TA Q +EHP++++
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-PIPD--SVSRDARDF 91
           G Y    D+WS G  +  +L+   P++G      L ++  G+    +P   ++S DA+D 
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVKR 117
           I K L  +P+ R TA Q +EHP++++
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
            D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ N 
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT-FPDFVTEGARDLISRLLKHNA 249
Query: 101 NDRPTAAQLMEHPFVK 116
           + R T A+++EHP++K
Sbjct: 250 SQRLTLAEVLEHPWIK 265

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
            D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ N 
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT-FPDFVTEGARDLISRLLKHNA 249
Query: 101 NDRPTAAQLMEHPFVK 116
           + R T A+++EHP++K
Sbjct: 250 SQRLTLAEVLEHPWIK 265

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIARGELPPIPDSV--SRDARDFIL 93
           Y + AD+WS+G +++E+ T   PY   +   + L K+ + E P +P  +  S D + F+ 
Sbjct: 206 YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVK 265
Query: 94  KCLQVNPNDRPTAAQLMEHPFVKR 117
            CL  +   RP   +L+EH F+KR
Sbjct: 266 DCLTKDHRKRPKYNKLLEHSFIKR 289

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 247
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 248 QRPMLREVLEHPWI 261

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDARDFI 92
           GYG   D+W+ G  +  +L    P++    +  L  I  G+     P  D  S   +D I
Sbjct: 281 GYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLI 340
Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKR 117
            + LQV+P  R TA Q ++HPF +R
Sbjct: 341 SRLLQVDPEARLTAEQALQHPFFER 365

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
            D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 248
Query: 101 NDRPTAAQLMEHPFV 115
           + RP   +++EHP++
Sbjct: 249 SQRPMLREVLEHPWI 263

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 251
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 252 QRPMLREVLEHPWI 265

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 251
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 252 QRPXLREVLEHPWI 265

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 272
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 273 QRPMLREVLEHPWI 286

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 248
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 249 QRPMLREVLEHPWI 262

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 192 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 250
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 251 QRPMLREVLEHPWI 264

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 246
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 247 QRPMLREVLEHPWI 260

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 251
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 252 QRPMLREVLEHPWI 265

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 246
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 247 QRPMLREVLEHPWI 260

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
            D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 245
Query: 101 NDRPTAAQLMEHPFV 115
           + RP   +++EHP++
Sbjct: 246 SQRPMLREVLEHPWI 260

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
            D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 245
Query: 101 NDRPTAAQLMEHPFV 115
           + RP   +++EHP++
Sbjct: 246 SQRPMLREVLEHPWI 260

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 272
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 273 QRPMLREVLEHPWI 286

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 205 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 263
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 264 QRPMLREVLEHPWI 277

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
            D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP
Sbjct: 186 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 244
Query: 101 NDRPTAAQLMEHPFV 115
           + RP   +++EHP++
Sbjct: 245 SQRPMLREVLEHPWI 259

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 251
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 252 QRPMLREVLEHPWI 265

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 249
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 250 QRPMLREVLEHPWI 263

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 249
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 250 QRPMLREVLEHPWI 263

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 251
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 252 QRPMLREVLEHPWI 265

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
            D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 248
Query: 101 NDRPTAAQLMEHPFV 115
           + RP   +++EHP++
Sbjct: 249 SQRPMLREVLEHPWI 263

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
            D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 248
Query: 101 NDRPTAAQLMEHPFV 115
           + RP   +++EHP++
Sbjct: 249 SQRPMLREVLEHPWI 263

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 249
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 250 QRPMLREVLEHPWI 263

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 247
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 248 QRPMLREVLEHPWI 261

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
            D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP
Sbjct: 184 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 242
Query: 101 NDRPTAAQLMEHPFV 115
           + RP   +++EHP++
Sbjct: 243 SQRPMLREVLEHPWI 257

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 247
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 248 QRPMLREVLEHPWI 261

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 248
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 249 QRPMLREVLEHPWI 262

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 246
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 247 QRPMLREVLEHPWI 260

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 246
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 247 QRPMLREVLEHPWI 260

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 246
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 247 QRPMLREVLEHPWI 260

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFK-IARGELPPIP---DSVSRDARDFI 92
           YG P D+W  G  +  +L+ C P++G +  + LF+ I +G+    P     +S  A+D +
Sbjct: 210 YGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKGKYKMNPRQWSHISESAKDLV 267
Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 128
            + L ++P +R T  + + HP++K     ++ +  P
Sbjct: 268 RRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLP 303

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFK-IARGELPPIP---DSVSRDARDFI 92
           YG P D+W  G  +  +L+ C P++G +  + LF+ I +G+    P     +S  A+D +
Sbjct: 212 YGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKGKYKMNPRQWSHISESAKDLV 269
Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 128
            + L ++P +R T  + + HP++K     ++ +  P
Sbjct: 270 RRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLP 305

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFK-IARGELPPIP---DSVSRDARDFI 92
           YG P D+W  G  +  +L+ C P++G +  + LF+ I +G+    P     +S  A+D +
Sbjct: 210 YGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKGKYKMNPRQWSHISESAKDLV 267
Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 128
            + L ++P +R T  + + HP++K     ++ +  P
Sbjct: 268 RRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLP 303

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 101
           D+WS+G    E L    P+    +     +I+R E    PD V+  ARD I + L+ NP+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 246
Query: 102 DRPTAAQLMEHPFV 115
            RP   +++EHP++
Sbjct: 247 QRPMLREVLEHPWI 260

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWVQALFKIARGELPPIP-DSVSRDARDF 91
            GY   +DIWS+GC + EM     P++G  +       KI + + PP+P D  S + R  
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQL 270
Query: 92  ILKCLQVNPNDRP 104
           +  C+  +P  RP
Sbjct: 271 VNMCINPDPEKRP 283

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-PIP--DSVSRDARDFIL 93
           YG P D+W+ G  +  +L    P++  +  +   +I  G    P P  D+V+ +A+D I 
Sbjct: 190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 249
Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
           K L +NP+ R TAA+ ++HP++
Sbjct: 250 KMLTINPSKRITAAEALKHPWI 271

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-PIP--DSVSRDARDFIL 93
           YG P D+W+ G  +  +L    P++  +  +   +I  G    P P  D+V+ +A+D I 
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 260
Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
           K L +NP+ R TAA+ ++HP++
Sbjct: 261 KMLTINPSKRITAAEALKHPWI 282

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 56/140 (40%), Gaps = 32/140 (22%)
Query: 8   GLGNALRRKWH--VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW 65
             G  +R+  H  V+ W    D ++ SK   Y    DIWSVGC   EM+     + GV  
Sbjct: 149 AFGIPVRKYTHEVVTLWYRAPDVLMGSKK--YSTTIDIWSVGCIFAEMVNGAPLFPGVSE 206
Query: 66  VQALFKIAR-------------GELP----------PIP-----DSVSRDARDFILKCLQ 97
              L +I R              ELP          P+P       +     D + K L+
Sbjct: 207 ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLK 266
Query: 98  VNPNDRPTAAQLMEHPFVKR 117
           ++PN R TA Q +EH + K 
Sbjct: 267 LDPNQRITAKQALEHAYFKE 286

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 56/140 (40%), Gaps = 32/140 (22%)
Query: 8   GLGNALRRKWH--VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW 65
             G  +R+  H  V+ W    D ++ SK   Y    DIWSVGC   EM+     + GV  
Sbjct: 149 AFGIPVRKYTHEIVTLWYRAPDVLMGSKK--YSTTIDIWSVGCIFAEMVNGTPLFPGVSE 206
Query: 66  VQALFKIAR-------------GELP----------PIP-----DSVSRDARDFILKCLQ 97
              L +I R              ELP          P+P       +     D + K L+
Sbjct: 207 ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLK 266
Query: 98  VNPNDRPTAAQLMEHPFVKR 117
           ++PN R TA Q +EH + K 
Sbjct: 267 LDPNQRITAKQALEHAYFKE 286

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 30/110 (27%)
Query: 37  YGLPADIWSVGCTVLEMLT-----RCRPYF-------------GVEWVQALF-KIARGEL 77
           Y    DIWSVGC + EMLT     + + Y              G E+VQ L  K A+  +
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI 260
Query: 78  PPIPDSVSRD-----------ARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
             +P +  +D           A D + K L+++ + R TAAQ + HPF +
Sbjct: 261 QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 30/110 (27%)
Query: 37  YGLPADIWSVGCTVLEMLT-----RCRPYF-------------GVEWVQALF-KIARGEL 77
           Y    DIWSVGC + EMLT     + + Y              G E+VQ L  K A+  +
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI 278
Query: 78  PPIPDSVSRD-----------ARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
             +P +  +D           A D + K L+++ + R TAAQ + HPF +
Sbjct: 279 QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 56/140 (40%), Gaps = 32/140 (22%)
Query: 8   GLGNALRRKWH--VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW 65
             G  +R+  H  V+ W    D ++ SK   Y    DIWSVGC   EM+     + GV  
Sbjct: 149 AFGIPVRKYTHEVVTLWYRAPDVLMGSKK--YSTTIDIWSVGCIFAEMVNGTPLFPGVSE 206
Query: 66  VQALFKIAR-------------GELP----------PIP-----DSVSRDARDFILKCLQ 97
              L +I R              ELP          P+P       +     D + K L+
Sbjct: 207 ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLK 266
Query: 98  VNPNDRPTAAQLMEHPFVKR 117
           ++PN R TA Q +EH + K 
Sbjct: 267 LDPNQRITAKQALEHAYFKE 286

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---VQALFKIARGELPPIP---DSVSR 86
           K  GY    DIWS+G  +  ML    P+         + L +I  G+        ++VS 
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE 257
Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFV--KRPLPTS 122
            A+D + K L V+P+ R TA Q+++HP+V  K  LP S
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQS 295

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---VQALFKIARGELPPIP---DSVSR 86
           K  GY    DIWS+G  +  ML    P+         + L +I  G+        ++VS 
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE 257
Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFV--KRPLPTS 122
            A+D + K L V+P+ R TA Q+++HP+V  K  LP S
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQS 295

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDARDFIL 93
           Y    D+WS+G  +  +L    P+ G    + L K+ +G+     P   +VS  A+D I 
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIK 273
Query: 94  KCLQVNPNDRPTAAQLMEHPFVK 116
           + LQ +   R +A Q +EHP++K
Sbjct: 274 QMLQFDSQRRISAQQALEHPWIK 296

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 14  RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA 73
           R+K      N +  +V++ K  G+    D+WS+GC +  +L    P+      +   +I 
Sbjct: 177 RKKTLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 234
Query: 74  RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
           + E   IP  ++  A   I K LQ +P  RPT  +L+   F
Sbjct: 235 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 274

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 14  RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA 73
           R+K      N +  +V++ K  G+    D+WS+GC +  +L    P+      +   +I 
Sbjct: 173 RKKTLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 230
Query: 74  RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
           + E   IP  ++  A   I K LQ +P  RPT  +L+   F
Sbjct: 231 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 270

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 14  RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA 73
           R+K      N +  +V++ K  G+    D+WS+GC +  +L    P+      +   +I 
Sbjct: 173 RKKTLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 230
Query: 74  RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
           + E   IP  ++  A   I K LQ +P  RPT  +L+   F
Sbjct: 231 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 270

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEW---VQALFKIARGELPPIPDSVSRDAR--- 89
           GY + +D+WS+G T+ E+ T   PY   +W      L ++ +G+ P + +S  R+     
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPY--PKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSF 262
Query: 90  -DFILKCLQVNPNDRPTAAQLMEHPFV 115
            +F+  CL  + + RP   +L++HPF+
Sbjct: 263 INFVNLCLTKDESKRPKYKELLKHPFI 289

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 14  RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA 73
           R+K      N +  +V++ K  G+    D+WS+GC +  +L    P+      +   +I 
Sbjct: 197 RKKVLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 254
Query: 74  RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
           + E   IP  ++  A   I K LQ +P  RPT  +L+   F
Sbjct: 255 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 294

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 14  RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA 73
           R+K      N +  +V++ K  G+    D+WS+GC +  +L    P+      +   +I 
Sbjct: 195 RKKVLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 252
Query: 74  RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
           + E   IP  ++  A   I K LQ +P  RPT  +L+   F
Sbjct: 253 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 292

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 59/159 (37%), Gaps = 36/159 (22%)
Query: 7   EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV 66
           E   +A +  +   RW    + V+  K  G+    D+WS GC + EM  R   + G  + 
Sbjct: 183 EDTADANKTHYVTHRWYRAPELVMQFK--GFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
Query: 67  QALFKIARGE-LPPIPDSV------SRD------------------------ARDFILKC 95
             L KI      P I D V      +RD                        A D I K 
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKM 300
Query: 96  LQVNPNDRPTAAQLMEHPFVKR---PLPTSWGLPTPHHF 131
           L+ NP  R +  Q + HP+ +    PL  + GL    HF
Sbjct: 301 LEFNPQRRISTEQALRHPYFESLFDPLDLTEGLSERFHF 339

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 14  RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA 73
           R+K      N +  +V++ K  G+    D+WS+GC +  +L    P+      +   +I 
Sbjct: 171 RKKVLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 228
Query: 74  RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
           + E   IP  ++  A   I K LQ +P  RPT  +L+   F
Sbjct: 229 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 268

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 15/94 (15%)
Query: 37  YGLPADIWSVGCTVLEMLT------------RCRPYFGVEWVQALFKIARGELPPIPDSV 84
           Y + +DIWS+G +++EM                RP   +   + L  I     P +P  V
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAI--FELLDYIVNEPPPKLPSGV 237
Query: 85  -SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
            S + +DF+ KCL  NP +R    QLM H F+KR
Sbjct: 238 FSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 271

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 34/129 (26%)
Query: 20  SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI------ 72
           +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I      
Sbjct: 210 TRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGS 266
Query: 73  -------------ARGELPPIPDSV-----------SRDARDFILKCLQVNPNDRPTAAQ 108
                        AR  L  +P                 A D + + L  NPN R T  +
Sbjct: 267 PSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEE 326
Query: 109 LMEHPFVKR 117
            + HP++++
Sbjct: 327 ALAHPYLEQ 335

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 59/159 (37%), Gaps = 36/159 (22%)
Query: 7   EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV 66
           E   +A +  +   RW    + V+  K  G+    D+WS GC + EM  R   + G  + 
Sbjct: 183 EDTADANKTHYVTHRWYRAPELVMQFK--GFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
Query: 67  QALFKIARGE-LPPIPDSV------SRD------------------------ARDFILKC 95
             L KI      P I D V      +RD                        A D I K 
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKM 300
Query: 96  LQVNPNDRPTAAQLMEHPFVKR---PLPTSWGLPTPHHF 131
           L+ NP  R +  Q + HP+ +    PL  + GL    HF
Sbjct: 301 LEFNPQRRISTEQALRHPYFESLFDPLDLTEGLSERFHF 339

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-PIP--DSVSRDARDFIL 93
           YG P D+W+ G  +  +L    P++  +  +   +I  G    P P  D+V+ +A+D I 
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
           K L +NP  R TA++ ++HP++
Sbjct: 243 KMLTINPAKRITASEALKHPWI 264

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-PIP--DSVSRDARDFIL 93
           YG P D+W+ G  +  +L    P++  +  +   +I  G    P P  D+V+ +A+D I 
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
           K L +NP  R TA++ ++HP++
Sbjct: 243 KMLTINPAKRITASEALKHPWI 264

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF-GVEWV--QALFKIARGELPPIP---DSVSRDAR 89
           GY    DIWS+G  +  MLT   P+  G +    + L +I  G+        +SVS  A+
Sbjct: 196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255
Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFV 115
           D + K L V+P+ R TAA ++ HP++
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRHPWI 281

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL 96
           Y   +DIWS+GC + E+     P+      +   KI  G+   IP   S +  + I + L
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252
Query: 97  QVNPNDRPTAAQLMEHPFV 115
            +    RP+  +++E+P +
Sbjct: 253 NLKDYHRPSVEEILENPLI 271

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL 96
           Y   +DIWS+GC + E+     P+      +   KI  G+   IP   S +  + I + L
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252
Query: 97  QVNPNDRPTAAQLMEHPFV 115
            +    RP+  +++E+P +
Sbjct: 253 NLKDYHRPSVEEILENPLI 271

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDARDFIL 93
           Y    D WS+G     +L    P++     +   KI  G      P  D +S  A+DFI 
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFIC 243
Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
             L+ +PN+R T  + + HP++
Sbjct: 244 HLLEKDPNERYTCEKALSHPWI 265

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG----ELPPIPDSVSRDAR 89
           +G Y    D+WS G  +  +L+ C P+ G      L K+ +G    ELP     VS  A+
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-KKVSESAK 259
Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVK 116
           D I K L   P+ R +A   ++H +++
Sbjct: 260 DLIRKXLTYVPSXRISARDALDHEWIQ 286

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL 96
           Y   +DIWS+GC + E+     P+      +   KI  G+   IP   S +  + I + L
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252
Query: 97  QVNPNDRPTAAQLMEHPFV 115
            +    RP+  +++E+P +
Sbjct: 253 NLKDYHRPSVEEILENPLI 271

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPP-IPDSVSRDARDF 91
            G YG  AD++S+G T+LE+      P+ G  W Q    + +G LPP     +S + R  
Sbjct: 229 QGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQ----LRQGYLPPEFTAGLSSELRSV 284
Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVKRP 118
           ++  L+ +P  R TA  L+  P +++P
Sbjct: 285 LVMMLEPDPKLRATAEALLALPVLRQP 311

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 247
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 302

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 244
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 299

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 247
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 302

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 244
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 299

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 31/115 (26%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 120
               AR +   +   +  D R  + + L  +PN R +A   + HPF   V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG----ELPPIPDSVSRDAR 89
           +G Y    D+WS G  +  +L+ C P+ G      L K+ +G    ELP     VS  A+
Sbjct: 224 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-KKVSESAK 282
Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVK 116
           D I K L   P+ R +A   ++H +++
Sbjct: 283 DLIRKMLTYVPSMRISARDALDHEWIQ 309

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG----ELPPIPDSVSRDAR 89
           +G Y    D+WS G  +  +L+ C P+ G      L K+ +G    ELP     VS  A+
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-KKVSESAK 259
Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVK 116
           D I K L   P+ R +A   ++H +++
Sbjct: 260 DLIRKMLTYVPSMRISARDALDHEWIQ 286

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG----ELPPIPDSVSRDAR 89
           +G Y    D+WS G  +  +L+ C P+ G      L K+ +G    ELP     VS  A+
Sbjct: 225 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-KKVSESAK 283
Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVK 116
           D I K L   P+ R +A   ++H +++
Sbjct: 284 DLIRKMLTYVPSMRISARDALDHEWIQ 310

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPD---SVSRDARDFILK 94
           G   D+W++G     +L+   P+ G + ++ L  + R +     D   SVS +A+DFI  
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN 287
Query: 95  CLQVNPNDRPTAAQLMEHPFVK 116
            LQ  P  R T    +EHP++K
Sbjct: 288 LLQKEPRKRLTVHDALEHPWLK 309

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 206 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 262
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 263 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 322
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 323 EVEQALAHPYLEQ 335

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-PIP--DSVSRDARDFIL 93
           YG P DIW+ G  +  +L    P++  +  +   +I  G    P P  D+V+ +A++ I 
Sbjct: 210 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLIN 269
Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
           + L +NP  R TA Q ++HP+V
Sbjct: 270 QMLTINPAKRITADQALKHPWV 291

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPD---SVSRDARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  I+        +   + S  A+DFI +
Sbjct: 189 GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 248
Query: 95  CLQVNPNDRPTAAQLMEHPFVK 116
            L  +P  R T AQ +EH ++K
Sbjct: 249 LLVKDPKRRMTIAQSLEHSWIK 270

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 190 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 246
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 307 EVEQALAHPYLEQ 319

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 191 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 247
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 248 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 307
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 308 EVEQALAHPYLEQ 320

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 192 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 248
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 249 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 308
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 309 EVEQALAHPYLEQ 321

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 183 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 239
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 240 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 299
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 300 EVEQALAHPYLEQ 312

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 190 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 246
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 307 EVEQALAHPYLEQ 319

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 194 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 250
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 251 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 310
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 311 EVEQALAHPYLEQ 323

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 186 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 242
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 243 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 303 EVEQALAHPYLEQ 315

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 190 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 246
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 307 EVEQALAHPYLEQ 319

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 184 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 240
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 241 ILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 300
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 301 EVEQALAHPYLEQ 313

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 206 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 262
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 263 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 322
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 323 EVEQALAHPYLEQ 335

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 184 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 240
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 241 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 300
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 301 EVEQALAHPYLEQ 313

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 186 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 242
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 243 ILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 303 EVEQALAHPYLEQ 315

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 190 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 246
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 307 EVEQALAHPYLEQ 319

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 186 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 242
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 243 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 303 EVEQALAHPYLEQ 315

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 186 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 242
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 243 ILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 303 EVEQALAHPYLEQ 315

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 186 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 242
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 243 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 303 EVEQALAHPYLEQ 315

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 190 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 246
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 307 EVEQALAHPYLEQ 319

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 188 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 244
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 245 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 304
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++++
Sbjct: 305 EVEQALAHPYLEQ 317

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFK-IARGELPPIP---DSVSRDARDF 91
            YG   D+WSVG     +L    P++     Q +F+ I   E   I    D VS +A+D 
Sbjct: 226 AYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDL 285
Query: 92  ILKCLQVNPNDRPTAAQLMEHPFV 115
           + K + ++P  R T  Q ++HP+V
Sbjct: 286 VRKLIVLDPKKRLTTFQALQHPWV 309

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 34/129 (26%)
Query: 20  SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI------ 72
           +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I      
Sbjct: 194 TRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGS 250
Query: 73  -------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRPTAAQ 108
                        AR  L  +P            +    A D + K L  NP+ R    Q
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310
Query: 109 LMEHPFVKR 117
            + HP++++
Sbjct: 311 ALAHPYLEQ 319

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 34/129 (26%)
Query: 20  SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI------ 72
           +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I      
Sbjct: 195 TRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGS 251
Query: 73  -------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRPTAAQ 108
                        AR  L  +P            +    A D + K L  NP+ R    Q
Sbjct: 252 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 311
Query: 109 LMEHPFVKR 117
            + HP++++
Sbjct: 312 ALAHPYLEQ 320

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG----ELPPIPDSVSRDAR 89
           +G Y    D+WS G  +  +L+ C P+ G      L K+ +G    ELP     VS  A+
Sbjct: 207 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK-KVSESAK 265
Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVK 116
           D I K L   P+ R +A   ++H +++
Sbjct: 266 DLIRKMLTYVPSMRISARDALDHEWIQ 292

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E++T+ R PY G+   + L ++ RG   P P        + ++
Sbjct: 181 GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMI 240
Query: 94  KCLQVNPNDRPTAAQL 109
            C + +P +RPT   L
Sbjct: 241 HCWKKDPEERPTFEYL 256

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 188 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 244
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 245 ILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 304
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++ +
Sbjct: 305 EVEQALAHPYLAQ 317

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 34/133 (25%)
Query: 16  KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-- 72
           ++  +RW    + ++NSK  GY    DIWSVGC + EML+  RP F G  ++  L  I  
Sbjct: 188 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 244
Query: 73  -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 104
                            AR  L  +P            +    A D + K L  NP+ R 
Sbjct: 245 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 304
Query: 105 TAAQLMEHPFVKR 117
              Q + HP++ +
Sbjct: 305 EVEQALAHPYLAQ 317

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  ++E++T  R PY G+   + +  + RG   P P++   +  + ++
Sbjct: 187 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMM 246
Query: 94  KCLQVNPNDRPT 105
           +C +  P +RPT
Sbjct: 247 RCWKNRPEERPT 258

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSR 86
           +N  + GYG   D+WS G  +  +L    P++  + +  L  I  G      P  D  S 
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 258
Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
             +D + + L V P  R TA + + HPF ++
Sbjct: 259 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSR 86
           +N  + GYG   D+WS G  +  +L    P++  + +  L  I  G      P  D  S 
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 258
Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
             +D + + L V P  R TA + + HPF ++
Sbjct: 259 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  ++E++T  R PY G+   + +  + RG   P P++   +  + ++
Sbjct: 344 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMM 403
Query: 94  KCLQVNPNDRPT 105
           +C +  P +RPT
Sbjct: 404 RCWKNRPEERPT 415

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 357 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 416
Query: 94  KCLQVNPNDRPTAAQL 109
           +C + +P +RPT   L
Sbjct: 417 QCWRKDPEERPTFEYL 432

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSR 86
           +N  + GYG   D+WS G  +  +L    P++  + +  L  I  G      P  D  S 
Sbjct: 186 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 245
Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
             +D + + L V P  R TA + + HPF ++
Sbjct: 246 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  ++E++T  R PY G+   + +  + RG   P P++   +  + ++
Sbjct: 360 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMM 419
Query: 94  KCLQVNPNDRPT 105
           +C +  P +RPT
Sbjct: 420 RCWKNRPEERPT 431

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 181 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 240
Query: 94  KCLQVNPNDRPTAAQL 109
           +C + +P +RPT   L
Sbjct: 241 QCWRKDPEERPTFEYL 256

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-PIP--DSVSRDAR 89
           +   YG P DIW+ G  +  +L    P++  +  +   +I  G    P P  D+V+ +A+
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFV 115
           + I + L +NP  R TA + ++HP+V
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPWV 264

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 179 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 238
Query: 94  KCLQVNPNDRPTAAQL 109
           +C + +P +RPT   L
Sbjct: 239 QCWRKDPEERPTFEYL 254

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 94  KCLQVNPNDRPTAAQL 109
           +C + +P +RPT   L
Sbjct: 250 QCWRKDPEERPTFEYL 265

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 94  KCLQVNPNDRPTAAQL 109
           +C + +P +RPT   L
Sbjct: 250 QCWRKDPEERPTFEYL 265

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 94  KCLQVNPNDRPTAAQL 109
           +C + +P +RPT   L
Sbjct: 250 QCWRKDPEERPTFEYL 265

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 94  KCLQVNPNDRPTAAQL 109
           +C + +P +RPT   L
Sbjct: 250 QCWRKDPEERPTFEYL 265

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 94  KCLQVNPNDRPTAAQL 109
           +C + +P +RPT   L
Sbjct: 250 QCWRKDPEERPTFEYL 265

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 94  KCLQVNPNDRPTAAQL 109
           +C + +P +RPT   L
Sbjct: 250 QCWRKDPEERPTFEYL 265

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 94  KCLQVNPNDRPTAAQL 109
           +C + +P +RPT   L
Sbjct: 250 QCWRKDPEERPTFEYL 265

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 94  KCLQVNPNDRPTAAQL 109
           +C + +P +RPT   L
Sbjct: 250 QCWRKDPEERPTFEYL 265

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 28/108 (25%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI------------------------ 72
           Y    DIWS+GC   EM+TR   + G   +  LF+I                        
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 73  ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
               AR +   +   +  D R  + + L  +PN R +A   + HPF +
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 43/109 (39%), Gaps = 26/109 (23%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR-----GE--------LP-- 78
              Y  P D+WSVGC   EM  R   + G   V  L KI       GE        LP  
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQ 252
Query: 79  --------PIPDSVS---RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
                   PI   V+      +D +LKCL  NP  R +A   + HP+ +
Sbjct: 253 AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIAR-GELPPIPDSVSRDARD 90
           K   +   +D W  G T+ EM T  + P+ G+   Q L KI + GE  P P+   +D  +
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 250
Query: 91  FILKCLQVNPNDRPTAAQLMEHPFVKRP 118
            +++C    P DRPT   L +     +P
Sbjct: 251 VMVQCWAHKPEDRPTFVALRDFLLEAQP 278

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDS----VSRDARDFIL 93
           G   D+WSVG     +L+   P+ G    + L  +   +   + DS    +S D +DFI 
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN-MDDSAFSGISEDGKDFIR 286
Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
           K L  +PN R T  Q +EHP++
Sbjct: 287 KLLLADPNTRMTIHQALEHPWL 308

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 43/109 (39%), Gaps = 26/109 (23%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR-----GE--------LP-- 78
              Y  P D+WSVGC   EM  R   + G   V  L KI       GE        LP  
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQ 252
Query: 79  --------PIPDSVS---RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
                   PI   V+      +D +LKCL  NP  R +A   + HP+ +
Sbjct: 253 AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 43/109 (39%), Gaps = 26/109 (23%)
Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR-----GE--------LP-- 78
              Y  P D+WSVGC   EM  R   + G   V  L KI       GE        LP  
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQ 252
Query: 79  --------PIPDSVS---RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
                   PI   V+      +D +LKCL  NP  R +A   + HP+ +
Sbjct: 253 AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 439 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 498
Query: 94  KCLQVNPNDRPT 105
           +C +  P +RPT
Sbjct: 499 QCWRKEPEERPT 510

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 187 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 246
Query: 94  KCLQVNPNDRPTAAQL 109
           +C +  P +RPT   L
Sbjct: 247 QCWRKEPEERPTFEYL 262

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF-GVEWV--QALFKIARGELPPIP---DSVSRDAR 89
           GY    DIWS+G  +   LT   P+  G +    + L +I  G+        +SVS  A+
Sbjct: 196 GYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255
Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFV 115
           D + K L V+P+ R TAA ++ HP++
Sbjct: 256 DLVSKXLHVDPHQRLTAALVLRHPWI 281

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDS----VSRDARDFIL 93
           G   D+WSVG     +L+   P+ G    + L  +   +   + DS    +S D +DFI 
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN-MDDSAFSGISEDGKDFIR 392
Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
           K L  +PN R T  Q +EHP++
Sbjct: 393 KLLLADPNTRMTIHQALEHPWL 414

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 415
Query: 94  KCLQVNPNDRPTAAQL 109
           +C +  P +RPT   L
Sbjct: 416 QCWRKEPEERPTFEYL 431

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 415
Query: 94  KCLQVNPNDRPTAAQL 109
           +C +  P +RPT   L
Sbjct: 416 QCWRKEPEERPTFEYL 431

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 415
Query: 94  KCLQVNPNDRPTAAQL 109
           +C +  P +RPT   L
Sbjct: 416 QCWRKEPEERPTFEYL 431

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIAR-GELPPIPDSVSRDARD 90
           K   +   +D W  G T+ EM T  + P+ G+   Q L KI + GE  P P+   +D  +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 246
Query: 91  FILKCLQVNPNDRPTAAQLMEHPFVKRP 118
            +++C    P DRPT   L +     +P
Sbjct: 247 VMVQCWAHKPEDRPTFVALRDFLLEAQP 274

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD---ARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  ++        +  S     A+DFI +
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
Query: 95  CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 126
            L  +P  R T    ++HP++K     + L ++W  P
Sbjct: 254 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 290

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 12  ALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFK 71
           +LRRK      + L  +++  +   +    D+W +G    E+L    P+      +   +
Sbjct: 175 SLRRKTMCGTLDYLPPEMIEGRM--HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRR 232
Query: 72  IARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV----KRPLPTS 122
           I + +L   P SV   A+D I K L+ NP++R   AQ+  HP+V    +R LP S
Sbjct: 233 IVKVDLK-FPASVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVRANSRRVLPPS 286

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD---ARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  ++        +  S     A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 95  CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 126
            L  +P  R T    ++HP++K     + L ++W  P
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 180 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 239
Query: 94  KCLQVNPNDRPTAAQL 109
           +C +  P +RPT   L
Sbjct: 240 QCWRKEPEERPTFEYL 255

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD---ARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  ++        +  S     A+DFI +
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
Query: 95  CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 126
            L  +P  R T    ++HP++K     + L ++W  P
Sbjct: 254 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 290

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 187 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 246
Query: 94  KCLQVNPNDRPTAAQL 109
           +C +  P +RPT   L
Sbjct: 247 QCWRKEPEERPTFEYL 262

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD---ARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  ++        +  S     A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 95  CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 126
            L  +P  R T    ++HP++K     + L ++W  P
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD---ARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  ++        +  S     A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 95  CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 126
            L  +P  R T    ++HP++K     + L ++W  P
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIAR-GELPPIPDSVSRDARD 90
           K   +   +D W  G T+ EM T  + P+ G+   Q L KI + GE  P P+   +D  +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 246
Query: 91  FILKCLQVNPNDRPTAAQLMEHPFVKRP 118
            +++C    P DRPT   L +     +P
Sbjct: 247 VMVQCWAHKPEDRPTFVALRDFLLEAQP 274

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIAR-GELPPIPDSVSRDARD 90
           K   +   +D W  G T+ EM T  + P+ G+   Q L KI + GE  P P+   +D  +
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 256
Query: 91  FILKCLQVNPNDRPTAAQLMEHPFVKRP 118
            +++C    P DRPT   L +     +P
Sbjct: 257 VMVQCWAHKPEDRPTFVALRDFLLEAQP 284

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD---ARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  ++        +  S     A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 95  CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 126
            L  +P  R T    ++HP++K     + L ++W  P
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + 
Sbjct: 183 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 242
Query: 94  KCLQVNPNDRPTAAQL 109
           +C +  P +RPT   L
Sbjct: 243 QCWRKEPEERPTFEYL 258

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIAR-GELPPIPDSVSRDARD 90
           K   +   +D W  G T+ EM T  + P+ G+   Q L KI + GE  P P+   +D  +
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 256
Query: 91  FILKCLQVNPNDRPTAAQLMEHPFVKRP 118
            +++C    P DRPT   L +     +P
Sbjct: 257 VMVQCWAHKPEDRPTFVALRDFLLEAQP 284

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G Y   +D+WS G TV E++T    PY G+   +    + +GE    P   + D    ++
Sbjct: 192 GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMV 251
Query: 94  KCLQVNPNDRPTAAQL 109
           KC  ++ N RPT  +L
Sbjct: 252 KCWMIDENIRPTFKEL 267

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDARDFIL 93
           Y    D WS+G     +L    P++     +   +I + E     P  D +S  A+DFI 
Sbjct: 199 YSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIR 258
Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
             ++ +PN R T  Q   HP++
Sbjct: 259 NLMEKDPNKRYTCEQAARHPWI 280

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 32/127 (25%)
Query: 20  SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR--GEL 77
           +RW    + +V      YG P D+W++GC   E+L+    + G   V  L+ I +  G+L
Sbjct: 165 TRWYRSPELLVGDTQ--YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222
Query: 78  PP----------------IPD------------SVSRDARDFILKCLQVNPNDRPTAAQL 109
            P                IPD            ++S  A   +  CL ++P +R T  QL
Sbjct: 223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQL 282
Query: 110 MEHPFVK 116
           + HP+ +
Sbjct: 283 LHHPYFE 289

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G Y   +D+WS G TV E++T    PY G+   +    + +GE    P   + D    ++
Sbjct: 210 GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMV 269
Query: 94  KCLQVNPNDRPTAAQL 109
           KC  ++ N RPT  +L
Sbjct: 270 KCWMIDENIRPTFKEL 285

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  I+            + S  A+DFI +
Sbjct: 210 GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 269
Query: 95  CLQVNPNDRPTAAQLMEHPFVK 116
            L  +P  R   AQ +EH ++K
Sbjct: 270 LLVKDPKRRMXIAQSLEHSWIK 291

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPD---SVSRDARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  I+        +   + S  A+DFI +
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 255
Query: 95  CLQVNPNDRPTAAQLMEHPFVK 116
            L  +P  R   AQ +EH ++K
Sbjct: 256 LLVKDPKRRMXIAQSLEHSWIK 277

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIAR-GELPPIPDSVSRDARD 90
           K   +   +D W  G T+ EM T  + P+ G+   Q L KI + GE  P P+   +D  +
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 250
Query: 91  FILKCLQVNPNDRPTAAQL 109
            +++C    P DRPT   L
Sbjct: 251 VMVQCWAHKPEDRPTFVAL 269

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP---PIPDSVSRDARDFIL 93
           Y    D WS+G     +L    P++     +   +I + E     P  D +S  A+DFI 
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
             ++ +P  R T  Q ++HP++
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWI 276

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIAR-GELPPIPDSVSRDARD 90
           K   +   +D W  G T+ EM T  + P+ G+   Q L KI + GE  P P+   +D  +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 246
Query: 91  FILKCLQVNPNDRPTAAQL 109
            +++C    P DRPT   L
Sbjct: 247 VMVQCWAHKPEDRPTFVAL 265

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 11/107 (10%)
Query: 40  PADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPD---SVSRDARDFILKCL 96
             D+W++G     +LT   P+ G +  +    I++  +    +   SVS+ A DFI   L
Sbjct: 213 ATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLL 272
Query: 97  QVNPNDRPTAAQLMEHPFVKR--------PLPTSWGLPTPHHFIMQS 135
             NP  RPTA   + H ++++        P  TS    T  H +  S
Sbjct: 273 VKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQDHSVRSS 319

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
           K+G +   +D+WS G  + E+ +   +PY G+   Q L  +  G     PD+      D 
Sbjct: 205 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 264
Query: 92  ILKCLQVNPNDRPTAAQLM 110
           +  C Q NPN RPT  +++
Sbjct: 265 MRMCWQFNPNMRPTFLEIV 283

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP---PIPDSVSRDARDFIL 93
           Y    D WS+G     +L    P++     +   +I + E     P  D +S  A+DFI 
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
             ++ +P  R T  Q ++HP++
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWI 276

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
           K+G +   +D+WS G  + E+ +   +PY G+   Q L  +  G     PD+      D 
Sbjct: 205 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 264
Query: 92  ILKCLQVNPNDRPTAAQLM 110
           +  C Q NPN RPT  +++
Sbjct: 265 MRMCWQFNPNMRPTFLEIV 283

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
           K+G +   +D+WS G  + E+ +   +PY G+   Q L  +  G     PD+      D 
Sbjct: 206 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 265
Query: 92  ILKCLQVNPNDRPTAAQLM 110
           +  C Q NPN RPT  +++
Sbjct: 266 MRMCWQFNPNMRPTFLEIV 284

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP---PIPDSVSRDARDFIL 93
           Y    D WS+G     +L    P++     +   +I + E     P  D +S  A+DFI 
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
             ++ +P  R T  Q ++HP++
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWI 276

>pdb|3GNI|B Chain B, Structure Of Strad And Mo25 Length = 389

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 45/138 (32%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L+ +V+     GY   +DI+SVG T  E+     P+  +   Q L +   G +P + D+ 
Sbjct: 202 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 261
Query: 85  SRDARD---------------------------------------------FILKCLQVN 99
           +  A +                                             F+ +CLQ N
Sbjct: 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN 321
Query: 100 PNDRPTAAQLMEHPFVKR 117
           P+ RP+A+ L+ H F K+
Sbjct: 322 PDARPSASTLLNHSFFKQ 339

>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 373

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 45/138 (32%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L+ +V+     GY   +DI+SVG T  E+     P+  +   Q L +   G +P + D+ 
Sbjct: 186 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 245
Query: 85  SRDARD---------------------------------------------FILKCLQVN 99
           +  A +                                             F+ +CLQ N
Sbjct: 246 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN 305
Query: 100 PNDRPTAAQLMEHPFVKR 117
           P+ RP+A+ L+ H F K+
Sbjct: 306 PDARPSASTLLNHSFFKQ 323

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP---PIPDSVSRDARDFIL 93
           Y    D WS+G     +L    P++     +   +I + E     P  D +S  A+DFI 
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 94  KCLQVNPNDRPTAAQLMEHPFV 115
             ++ +P  R T  Q ++HP++
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWI 276

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD---ARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  ++        +  S     A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 95  CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL 125
            L  +P  R T    ++HP++K P  T   L
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK-PKDTQQAL 284

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD---ARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  ++        +  S     A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 95  CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL 125
            L  +P  R T    ++HP++K P  T   L
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK-PKDTQQAL 284

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD---ARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  ++        +  S     A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 95  CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL 125
            L  +P  R T    ++HP++K P  T   L
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK-PKDTQQAL 284

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD---ARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  ++        +  S     A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 95  CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL 125
            L  +P  R T    ++HP++K P  T   L
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK-PKDTQQAL 284

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD---ARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  ++        +  S     A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 95  CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL 125
            L  +P  R T    ++HP++K P  T   L
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK-PKDTQQAL 284

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD---ARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  ++        +  S     A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 95  CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL 125
            L  +P  R T    ++HP++K P  T   L
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK-PKDTQQAL 284

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Query: 14  RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA 73
           R+K      N +  +V+  K  G+    DIWS+GC +  +L    P+      +   +I 
Sbjct: 198 RKKXLCGTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIK 255
Query: 74  RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
           + E   +P  ++  A   I + L  +P  RP+ A+L+   F
Sbjct: 256 KNEY-SVPRHINPVASALIRRMLHADPTLRPSVAELLTDEF 295

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Query: 14  RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA 73
           R+K      N +  +V+  K  G+    DIWS+GC +  +L    P+      +   +I 
Sbjct: 198 RKKTLCGTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIK 255
Query: 74  RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
           + E   +P  ++  A   I + L  +P  RP+ A+L+   F
Sbjct: 256 KNEY-SVPRHINPVASALIRRMLHADPTLRPSVAELLTDEF 295

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD---ARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  ++        +  S     A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 95  CLQVNPNDRPTAAQLMEHPFVK 116
            L  +P  R T    ++HP++K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK 276

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRD---ARDFILK 94
           GL AD+WS+G     +L+   P+ G    + L  ++        +  S     A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 95  CLQVNPNDRPTAAQLMEHPFVK 116
            L  +P  R T    ++HP++K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK 276

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  E +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           G+    D WS+G  + +MLT   P+ G    + + KI + +L  +P  ++++ARD + K 
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL-NLPPYLTQEARDLLKKL 255
Query: 96  LQVNPNDR-----PTAAQLMEHPFVK 116
           L+ N   R       A ++  HPF +
Sbjct: 256 LKRNAASRLGAGPGDAGEVQAHPFFR 281

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           G+    D WS+G  + +MLT   P+ G    + + KI + +L  +P  ++++ARD + K 
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL-NLPPYLTQEARDLLKKL 255
Query: 96  LQVNPNDR-----PTAAQLMEHPFVK 116
           L+ N   R       A ++  HPF +
Sbjct: 256 LKRNAASRLGAGPGDAGEVQAHPFFR 281

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIA----RGELPPIPDSVSRDARDFILKCL 96
           D+WS+GC +  M     P+  +   +  L  I       E P IP+   +D +D +  CL
Sbjct: 202 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 258
Query: 97  QVNPNDRPTAAQLMEHPFVK 116
           + +P  R +  +L+ HP+V+
Sbjct: 259 KRDPKQRISIPELLAHPYVQ 278

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIP-----DSVSRDARDFILKC 95
           +D++S+GC + E+LT   P+ G   V   ++  R +  PIP     + +S D    +LK 
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSARHEGLSADLDAVVLKA 257
Query: 96  LQVNPNDRPTAAQLMEHPFVK 116
           L  NP +R   A  M    V+
Sbjct: 258 LAKNPENRYQTAAEMRADLVR 278

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Query: 14  RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA 73
           R+K      N +  +V+  K  G+    DIWS+GC +  +L    P+      +   +I 
Sbjct: 198 RKKDLCGTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIK 255
Query: 74  RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
           + E   +P  ++  A   I + L  +P  RP+ A+L+   F
Sbjct: 256 KNEY-SVPRHINPVASALIRRMLHADPTLRPSVAELLTDEF 295

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 256
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 257 WMIDADSRPKFRELI 271

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 202 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 261
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 262 WMIDADSRPKFRELI 276

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIP-----DSVSRDARDFILKC 95
           +D++S+GC + E+LT   P+ G   V   ++  R +  PIP     + +S D    +LK 
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSARHEGLSADLDAVVLKA 257
Query: 96  LQVNPNDRPTAAQLMEHPFVK 116
           L  NP +R   A  M    V+
Sbjct: 258 LAKNPENRYQTAAEMRADLVR 278

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 221 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 280
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 281 WMIDADSRPKFRELI 295

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 259
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 260 WMIDADSRPKFRELI 274

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 257
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 258 WMIDADSRPKFRELI 272

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIP-----DSVSRDARDFILKC 95
           +D++S+GC + E+LT   P+ G   V   ++  R +  PIP     + +S D    +LK 
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSARHEGLSADLDAVVLKA 257
Query: 96  LQVNPNDRPTAAQLMEHPFVK 116
           L  NP +R   A  M    V+
Sbjct: 258 LAKNPENRYQTAAEMRADLVR 278

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 256 WMIDADSRPKFRELI 270

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 257
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 258 WMIDADSRPKFRELI 272

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIP-----DSVSRDARDFILKC 95
           +D++S+GC + E+LT   P+ G   V   ++  R +  PIP     + +S D    +LK 
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSARHEGLSADLDAVVLKA 257
Query: 96  LQVNPNDRPTAAQLMEHPFVK 116
           L  NP +R   A  M    V+
Sbjct: 258 LAKNPENRYQTAAEMRADLVR 278

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 256 WMIDADSRPKFRELI 270

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 257
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 258 WMIDADSRPKFRELI 272

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 258
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 259 WMIDADSRPKFRELI 273

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIA----RGELPPIPDSVSRDARDFILKCL 96
           D+WS+GC +  M     P+  +   +  L  I       E P IP+   +D +D +  CL
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 305
Query: 97  QVNPNDRPTAAQLMEHPFVK 116
           + +P  R +  +L+ HP+V+
Sbjct: 306 KRDPKQRISIPELLAHPYVQ 325

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIA----RGELPPIPDSVSRDARDFILKCL 96
           D+WS+GC +  M     P+  +   +  L  I       E P IP+   +D +D +  CL
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 305
Query: 97  QVNPNDRPTAAQLMEHPFVK 116
           + +P  R +  +L+ HP+V+
Sbjct: 306 KRDPKQRISIPELLAHPYVQ 325

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 256 WMIDADSRPKFRELI 270

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 256 WMIDADSRPKFRELI 270

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 258
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 259 WMIDADSRPKFRELI 273

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 262
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 263 WMIDADSRPKFRELI 277

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 256
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 257 WMIDADSRPKFRELI 271

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 256 WMIDADSRPKFRELI 270

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 262
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 263 WMIDADSRPKFRELI 277

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 258
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 259 WMIDADSRPKFRELI 273

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 262
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 263 WMIDADSRPKFRELI 277

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIP-----DSVSRDARDFILKC 95
           +D++S+GC + E+LT   P+ G   V   ++  R +  PIP     + +S D    +LK 
Sbjct: 217 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSARHEGLSADLDAVVLKA 274
Query: 96  LQVNPNDRPTAAQLMEHPFVK 116
           L  NP +R   A  M    V+
Sbjct: 275 LAKNPENRYQTAAEMRADLVR 295

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 259
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 260 WMIDADSRPKFRELI 274

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Query: 14  RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA 73
           R+K      N +  +V+  K  G+    DIWS+GC +  +L    P+      +   +I 
Sbjct: 182 RKKDLCGTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIK 239
Query: 74  RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
           + E   +P  ++  A   I + L  +P  RP+ A+L+   F
Sbjct: 240 KNEY-SVPRHINPVASALIRRMLHADPTLRPSVAELLTDEF 279

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 190 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 249
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 250 WMIDADSRPKFRELI 264

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 262
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 263 WMIDADSRPKFRELI 277

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 32/111 (28%)
Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI---------------------AR 74
           YG   D+W++GC V EM     P F G   +  L+ I                     A 
Sbjct: 202 YGKAVDVWAIGCLVTEMFMG-EPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260
Query: 75  GELPPIPD---------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
             LP I +          +S    D   KCL ++P+ RP  A+L+ H F +
Sbjct: 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIA----RGELPPIPDSVSRDARDFILKCL 96
           D+WS+GC +  M     P+  +   +  L  I       E P IP+   +D +D +  CL
Sbjct: 205 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 261
Query: 97  QVNPNDRPTAAQLMEHPFVK 116
           + +P  R +  +L+ HP+V+
Sbjct: 262 KRDPKQRISIPELLAHPYVQ 281

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 193 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 252
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 253 WMIDADSRPKFRELI 267

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
           K+G +   +D+WS G  + E+ +   +PY G+   Q L  +  G     PD+      D 
Sbjct: 205 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 264
Query: 92  ILKCLQVNPNDRPTAAQLM 110
           +  C Q NP  RPT  +++
Sbjct: 265 MRMCWQFNPKMRPTFLEIV 283

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
           K+G +   +D+WS G  + E+ +   +PY G+   Q L  +  G     PD+      D 
Sbjct: 205 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 264
Query: 92  ILKCLQVNPNDRPTAAQLM 110
           +  C Q NP  RPT  +++
Sbjct: 265 MRMCWQFNPKMRPTFLEIV 283

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIA----RGELPPIPDSVSRDARDFILKCL 96
           D+WS+GC +  M     P+  +   +  L  I       E P IP+   +D +D +  CL
Sbjct: 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 277
Query: 97  QVNPNDRPTAAQLMEHPFVK 116
           + +P  R +  +L+ HP+V+
Sbjct: 278 KRDPKQRISIPELLAHPYVQ 297

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIA----RGELPPIPDSVSRDARDFILKCL 96
           D+WS+GC +  M     P+  +   +  L  I       E P IP+   +D +D +  CL
Sbjct: 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 277
Query: 97  QVNPNDRPTAAQLMEHPFVK 116
           + +P  R +  +L+ HP+V+
Sbjct: 278 KRDPKQRISIPELLAHPYVQ 297

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIA----RGELPPIPDSVSRDARDFILKCL 96
           D+WS+GC +  M     P+  +   +  L  I       E P IP+   +D +D +  CL
Sbjct: 201 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 257
Query: 97  QVNPNDRPTAAQLMEHPFVK 116
           + +P  R +  +L+ HP+V+
Sbjct: 258 KRDPKQRISIPELLAHPYVQ 277

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
           K+G +   +D+WS G  + E+ +   +PY G+   Q L  +  G     PD+      D 
Sbjct: 205 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 264
Query: 92  ILKCLQVNPNDRPTAAQLM 110
           +  C Q NP  RPT  +++
Sbjct: 265 MRMCWQFNPKMRPTFLEIV 283

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 24  SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDS 83
           +L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P  
Sbjct: 204 ALAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSH 260
Query: 84  VSRDARDFILKCLQVNPNDR 103
            S D +D +   LQV+   R
Sbjct: 261 FSSDLKDLLRNLLQVDLTKR 280

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 42  DIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIA----RGELPPIPDSVSRDARDFILKCL 96
           D+WS+GC +  M     P+  +   +  L  I       E P IP+   +D +D +  CL
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 305
Query: 97  QVNPNDRPTAAQLMEHPFVK 116
           + +P  R +  +L+ HP+V+
Sbjct: 306 KRDPKQRISIPELLAHPYVQ 325

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF--GVEWVQALF--KIARGELPPIPDSV 84
           +V   + G+    D WS+G  + E+LT   P+   G +  QA    +I + E PP P  +
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE-PPYPQEM 289
Query: 85  SRDARDFILKCLQVNPNDR-----PTAAQLMEHPFVKR 117
           S  A+D I + L  +P  R       A ++ EH F ++
Sbjct: 290 SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 37  YGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           Y   +D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC
Sbjct: 230 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 289
Query: 96  LQVNPNDRPTAAQLM 110
             ++ + RP   +L+
Sbjct: 290 WMIDADSRPKFRELI 304

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 226 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 282
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 283 SSDLKDLLRNLLQVDLTKR 301

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
           K+G +   +D+WS G  + E+ +   +PY G+   Q L  +  G     PD+      D 
Sbjct: 202 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 261
Query: 92  ILKCLQVNPNDRPTAAQLM 110
           +  C Q NP  RPT  +++
Sbjct: 262 MRMCWQFNPKMRPTFLEIV 280

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSV 84
           +V+N+ N  YG   D WS G  +  +L    P+ GV     + ++   +L    P  + +
Sbjct: 244 EVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVL 303
Query: 85  SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           S  ARD +   L  N ++R  A + ++HP++ +
Sbjct: 304 SPLARDLLSNLLNRNVDERFDAMRALQHPWISQ 336

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 33  KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
           K+G +   +D+WS G  + E+ +   +PY G+   Q L  +  G     PD+      D 
Sbjct: 204 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 263
Query: 92  ILKCLQVNPNDRPTAAQLM 110
           +  C Q NP  RPT  +++
Sbjct: 264 MRMCWQFNPKMRPTFLEIV 282

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 191 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 247
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 248 SSDLKDLLRNLLQVDLTKR 266

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 226 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 282
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 283 SSDLKDLLRNLLQVDLTKR 301

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 198 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 254
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 255 SSDLKDLLRNLLQVDLTKR 273

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 226 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 282
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 283 SSDLKDLLRNLLQVDLTKR 301

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIIISK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 39/135 (28%)
Query: 20  SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF----------------GV 63
           SR+    + +V+ ++  Y L  D+WS+GC    M+ R  P+F                G 
Sbjct: 209 SRYFKGPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 266
Query: 64  EWVQALFKIARGELPPIPDS---------------------VSRDARDFILKCLQVNPND 102
           + + A     R EL P  ++                     VS +A DF+ K L+ +  +
Sbjct: 267 DGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQE 326
Query: 103 RPTAAQLMEHPFVKR 117
           R TA + M HP+ ++
Sbjct: 327 RLTALEAMTHPYFQQ 341

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 198 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 254
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 255 SSDLKDLLRNLLQVDLTKR 273

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 192 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 248
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 249 SSDLKDLLRNLLQVDLTKR 267

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ 97
           G   D+WS G  +  ML R  P F  E +  LFK     +  +P  +S  A   I + L 
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLP-FDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLI 248
Query: 98  VNPNDRPTAAQLMEHPFVKRPLP 120
           VNP +R +  ++M+  + K  LP
Sbjct: 249 VNPLNRISIHEIMQDDWFKVDLP 271

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 200 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 256
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 257 SSDLKDLLRNLLQVDLTKR 275

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV 84
           L  +++ SK  GY    D W++G  + EM     P+F  + +Q   KI  G++   P   
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 85  SRDARDFILKCLQVNPNDR 103
           S D +D +   LQV+   R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ 97
           G   D+WS G  +  ML R  P F  E +  LFK     +  +P  +S  A   I + L 
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLP-FDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLI 249
Query: 98  VNPNDRPTAAQLMEHPFVKRPLP 120
           VNP +R +  ++M+  + K  LP
Sbjct: 250 VNPLNRISIHEIMQDDWFKVDLP 272

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 42  DIWSVGCTVLEMLTRCRPYFG--VEWVQ--ALFKIARGELPPIPDSVSRDARDFILKCLQ 97
           DIWS G  +  +LT C P+ G  +E VQ  A +K     +   P  ++  A D + + L 
Sbjct: 207 DIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP--LTPQAVDLLKQMLT 264
Query: 98  VNPNDRPTAAQLMEHPFVKR 117
            +P  RP+AAQ++ H + K+
Sbjct: 265 KDPERRPSAAQVLHHEWFKQ 284

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ 97
           G   D+WS G  +  ML R  P F  E +  LFK     +  +P  +S  A   I + L 
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLP-FDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLI 239
Query: 98  VNPNDRPTAAQLMEHPFVKRPLP 120
           VNP +R +  ++M+  + K  LP
Sbjct: 240 VNPLNRISIHEIMQDDWFKVDLP 262

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ 97
           G   D+WS G  +  ML R  P F  E +  LFK     +  +P  +S  A   I + L 
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLP-FDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLI 243
Query: 98  VNPNDRPTAAQLMEHPFVKRPLP 120
           VNP +R +  ++M+  + K  LP
Sbjct: 244 VNPLNRISIHEIMQDDWFKVDLP 266

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 78  PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           P +P  V S + +DF+ KCL  NP +R    QLM H F+KR
Sbjct: 263 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 78  PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           P +P  V S + +DF+ KCL  NP +R    QLM H F+KR
Sbjct: 263 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 7   EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEW 65
           +G  + L  KW      SL D +       Y + +D+W+ G T+ E++TR + PY G+E 
Sbjct: 195 QGCASKLPVKWLA--LESLADNL-------YTVHSDVWAFGVTMWEIMTRGQTPYAGIEN 245
Query: 66  VQALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPT 105
            +    +  G     P     +  D + +C   +P  RP+
Sbjct: 246 AEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPS 285

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 78  PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           P +P +V S + +DF+ KCL  NP +R    QLM H F+KR
Sbjct: 325 PKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 365

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 78  PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           P +P  V S + +DF+ KCL  NP +R    QLM H F+KR
Sbjct: 290 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 330

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
           GY    D W++G  + EM     P+F  + +Q   KI  G++   P   S D +D +   
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNL 272
Query: 96  LQVNPNDR 103
           LQV+   R
Sbjct: 273 LQVDLTKR 280

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 78  PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           P +P  V S + +DF+ KCL  NP +R    QLM H F+KR
Sbjct: 263 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 78  PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           P +P  V S + +DF+ KCL  NP +R    QLM H F+KR
Sbjct: 263 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 35  GGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           G + + +D+WS G  + E++T  R PY G+   + +  + RG     PD+   +    + 
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 254
Query: 94  KCLQVNPNDRPT 105
            C +  P DRPT
Sbjct: 255 LCWKERPEDRPT 266

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	135
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-45
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-40
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-36
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-33
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-32
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	8e-32
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	9e-32
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-31
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-31
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-29
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-29
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-27
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-27
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	3e-27
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-27
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-27
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	5e-27
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-26
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-26
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-26
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-25
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-24
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-24
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-23
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-23
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-23
3aln_A	327	Dual specificity mitogen-activated protein kinase;	5e-23
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-22
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-22
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-21
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-21
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	8e-21
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-20
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	8e-20
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-19
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-19
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-19
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-19
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-19
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-19
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-19
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-19
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	6e-19
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	9e-19
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-18
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-18
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-18
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	8e-18
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	9e-18
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-17
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-17
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-17
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	5e-17
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	6e-17
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	7e-17
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	9e-17
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-16
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-16
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-16
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-16
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-16
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-16
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-16
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-16
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	6e-16
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	6e-16
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	6e-16
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	7e-16
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	8e-16
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	9e-16
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	9e-16
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-15
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-15
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-15
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-15
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-15
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-15
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-15
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-15
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	3e-15
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	4e-15
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	5e-15
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	7e-15
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	7e-15
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-14
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-14
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-14
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-14
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	4e-14
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	4e-14
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	6e-14
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-14
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	8e-14
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	8e-14
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-13
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-13
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-13
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-13
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	3e-13
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-13
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-13
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-13
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	4e-13
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	4e-13
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-13
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	5e-13
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	5e-13
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	6e-13
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	8e-13
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	9e-13
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	9e-13
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-12
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-12
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-12
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-12
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-12
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	3e-12
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	4e-12
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	5e-12
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	5e-12
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	6e-12
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	7e-12
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	7e-12
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	7e-12
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	8e-12
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-11
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-11
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-11
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-11
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-11
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	2e-11
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-11
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-11
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-11
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	3e-11
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-11
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	4e-11
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	6e-11
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	6e-11
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	8e-11
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	9e-11
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-10
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-10
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-10
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-10
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-10
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-10
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-10
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	7e-10
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	7e-10
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-09
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-09
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-09
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	3e-09
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-09
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-09
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	6e-09
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	8e-09
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-08
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-08
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	4e-08
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-08
3rp9_A	458	Mitogen-activated protein kinase; structural genom	4e-08
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	5e-08
3soc_A	322	Activin receptor type-2A; structural genomics cons	6e-08
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	7e-08
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	7e-08
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	9e-08
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-07
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-07
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-07
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-07
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-07
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-07
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-07
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-07
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-07
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-07
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-07
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-07
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-07
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-07
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-07
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-07
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-07
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-07
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-07
3pls_A	298	Macrophage-stimulating protein receptor; protein k	4e-07
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	5e-07
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	5e-07
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	6e-07
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	7e-07
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	7e-07
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-06
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-06
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-06
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-06
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-06
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-06
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-06
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-06
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-06
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-06
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-06
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	4e-06
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-06
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-06
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	6e-06
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	6e-06
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	6e-06
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	6e-06
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	7e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	9e-06
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-05
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-05
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-05
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	5e-05
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	6e-05
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	6e-05
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	9e-05
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-04

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  148 bits (376), Expect = 1e-45
 Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIARGEL-PPIPDSVSR 86
           +++    GYG  ADIWS+GCT++EM T   P++ + E   A+FK+   ++ P IP+S+S 
Sbjct: 194 IIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSA 253

Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
           +A+ FILKC + +P+ R  A  L+   F+K      
Sbjct: 254 EAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKK 289

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  136 bits (344), Expect = 2e-40
 Identities = 26/98 (26%), Positives = 35/98 (35%), Gaps = 4/98 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE--LPPIPDSVSRDARD 90
                    DIWS  C +L ML  C P+          KIA     +  IP S +     
Sbjct: 229 MGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQ 288

Query: 91  FILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 128
            I + L+  P  R +A +L         L    GL +P
Sbjct: 289 AIQEGLRKEPVHRASAMELRRKVGKA--LQEVGGLKSP 324

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  124 bits (313), Expect = 4e-36
 Identities = 17/86 (19%), Positives = 36/86 (41%), Gaps = 2/86 (2%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP--IPDSVSRDARDF 91
              Y    D+++ G  +LEM T   PY   +    +++     + P         + ++ 
Sbjct: 203 EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 262

Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVKR 117
           I  C++ N ++R +   L+ H F + 
Sbjct: 263 IEGCIRQNKDERYSIKDLLNHAFFQE 288

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  117 bits (296), Expect = 2e-33
 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP-IPDSVSRDARDFI 92
            G YG  AD++S+G T+LE+        G E  Q L    +G LPP     +S + R  +
Sbjct: 229 QGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLR---QGYLPPEFTAGLSSELRSVL 285

Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKRP 118
           +  L+ +P  R TA  L+  P +++P
Sbjct: 286 VMMLEPDPKLRATAEALLALPVLRQP 311

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  115 bits (289), Expect = 1e-32
 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 5/85 (5%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           N  +   ADI+++  TV+           G +W     +I +G LP IP  +S++  + +
Sbjct: 205 NYTHLPKADIFALALTVVCAAGAEPLPRNGDQW----HEIRQGRLPRIPQVLSQEFTELL 260

Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKR 117
              +  +P  RP+A  L++H  +  
Sbjct: 261 KVMIHPDPERRPSAMALVKHSVLLS 285

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  114 bits (287), Expect = 8e-32
 Identities = 24/85 (28%), Positives = 41/85 (48%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           +N  Y   +DIW++GC + E+ T    +        + KI  G  PP+    S D R  +
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLV 257

Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKR 117
            +  + NP DRP+   ++E  F+ +
Sbjct: 258 SQLFKRNPRDRPSVNSILEKGFIAK 282

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  114 bits (286), Expect = 9e-32
 Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 2/115 (1%)

Query: 23  NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIARGELP-PI 80
           +  + +            +D+WS+GC +  M     P+  +   +  L  I         
Sbjct: 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 242

Query: 81  PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHFIMQS 135
           PD   +D +D +  CL+ +P  R +  +L+ HP+V+        +       M+ 
Sbjct: 243 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKY 297

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  114 bits (287), Expect = 1e-31
 Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 2/115 (1%)

Query: 23  NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIARGELP-PI 80
           +  + +            +D+WS+GC +  M     P+  +   +  L  I         
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 289

Query: 81  PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHFIMQS 135
           PD   +D +D +  CL+ +P  R +  +L+ HP+V+        +       M+ 
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKY 344

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  112 bits (281), Expect = 3e-31
 Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 2/97 (2%)

Query: 23  NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIARGELP-PI 80
           +  + +            +D+WS+GC +  M     P+  +   +  L  I         
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 261

Query: 81  PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           PD   +D +D +  CL+ +P  R +  +L+ HP+V+ 
Sbjct: 262 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 298

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  106 bits (267), Expect = 3e-29
 Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 4/102 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWVQALFKIARGELPPIPDSV-SRDAR 89
              GY   +DIWS+GC + EM     P++G  +       KI + + PP+P    S + R
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR 268

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVKRP-LPTSWGLPTPHH 130
             +  C+  +P  RP    + +          +S      HH
Sbjct: 269 QLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLEHHHHHH 310

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  105 bits (264), Expect = 5e-29
 Identities = 21/85 (24%), Positives = 38/85 (44%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
               Y   +DIWS+GC + E+     P+      +   KI  G+   IP   S +  + I
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEII 248

Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKR 117
            + L +    RP+  +++E+P +  
Sbjct: 249 TRMLNLKDYHRPSVEEILENPLILE 273

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  103 bits (258), Expect = 1e-27
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI-PDSVSRD 87
           ++    G Y    D+WS+G T +E+  R  P F +  + AL+ IA+ E P +     S  
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEY 281

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
            R+F+  CLQ  P DRPT+  L++H FV R  P +
Sbjct: 282 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPT 316

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  101 bits (254), Expect = 2e-27
 Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 2/92 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDARD 90
           K+  Y   ADIWS+G T++EM     P+  +  ++ L KIA+ + P +  P   S + RD
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRD 254

Query: 91  FILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
           F+   L  NP  RP+AAQL+EHPFV       
Sbjct: 255 FLKIALDKNPETRPSAAQLLEHPFVSSITSNK 286

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  101 bits (254), Expect = 3e-27
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDARD 90
           +  GY   ADIWS+G T +EM     PY  +  ++A+F I     P    P+  S +  D
Sbjct: 198 QEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTD 257

Query: 91  FILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
           F+ +CL  +P  R TA QL++HPFV+     S
Sbjct: 258 FVKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  101 bits (253), Expect = 4e-27
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 2/92 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDARD 90
               YG   DIWS+G   +EM+    PY     ++AL+ IA    P +  P+ +S   RD
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 248

Query: 91  FILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
           F+ +CL+++   R +A +L++H F+K   P S
Sbjct: 249 FLNRCLEMDVEKRGSAKELLQHQFLKIAKPLS 280

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  100 bits (251), Expect = 5e-27
 Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
            +  YG   D++++G  + E+L  C   F  E  +    +  G    I D   +  +  +
Sbjct: 194 SSQDYGKEVDLYALGLILAELLHVCDTAF--ETSKFFTDLRDG---IISDIFDKKEKTLL 248

Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKRPLP 120
            K L   P DRP  ++++    V +  P
Sbjct: 249 QKLLSKKPEDRPNTSEILRTLTVWKKSP 276

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  100 bits (252), Expect = 5e-27
 Identities = 28/85 (32%), Positives = 47/85 (55%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           K   Y   ADIWS+G T +E+     P+  +  ++ LF I +   P +  + S+  ++F+
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 251

Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKR 117
             CL   P+ RPTA +L++H F+ R
Sbjct: 252 EACLNKEPSFRPTAKELLKHKFILR 276

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 99.7 bits (249), Expect = 1e-26
 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 2/92 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDARD 90
               Y    DIWS+G  V+EM+    PYF    VQA+ ++     P +     VS   RD
Sbjct: 214 SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRD 273

Query: 91  FILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
           F+ + L  +P +R TA +L++HPF+ +     
Sbjct: 274 FLERMLVRDPQERATAQELLDHPFLLQTGLPE 305

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  101 bits (253), Expect = 2e-26
 Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 3/90 (3%)

Query: 32  SKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWVQALFKIARGEL--PPIPDSVSRDA 88
                     DI+S GC    +++     FG     QA   +    L            A
Sbjct: 201 DCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIA 260

Query: 89  RDFILKCLQVNPNDRPTAAQLMEHPFVKRP 118
           R+ I K + ++P  RP+A  +++HPF    
Sbjct: 261 RELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 98.2 bits (245), Expect = 7e-26
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 1/96 (1%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI-PDSVSR 86
               + +  Y   +D+WS+G T +EM     P   +  ++ALF I R   P +     S+
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSK 261

Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
             + FI  CL  N + RP   QLM+HPF++      
Sbjct: 262 KFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNER 297

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 95.9 bits (239), Expect = 4e-25
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 5/92 (5%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIARGELPPIPDSVSRDARDF 91
               Y    DI+S+G  + E+     P+   +E V+ L  +   + PP+           
Sbjct: 203 HGNSYSHKVDIFSLGLILFEL---LYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVM 259

Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVKR-PLPTS 122
           +   L  +P +RP A  ++E+   +    P  
Sbjct: 260 VQDMLSPSPMERPEAINIIENAVFEDLDFPGK 291

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 94.3 bits (235), Expect = 1e-24
 Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 6/97 (6%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVS 85
           V++   G Y    D++S+G    EM+       G+E V  L K+    +   P   D+  
Sbjct: 201 VLDGT-GHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVSIEFPPDFDDNKM 257

Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
           +  +  I   +  +PN RP A  L+   ++       
Sbjct: 258 KVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDE 294

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 93.5 bits (233), Expect = 3e-24
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 9/103 (8%)

Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV----- 84
           V  +  GY   ADIWS G T +E+ T   PY     ++ L    + + P +   V     
Sbjct: 197 VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEM 256

Query: 85  ----SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSW 123
                +  R  I  CLQ +P  RPTAA+L+ H F ++     +
Sbjct: 257 LKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEF 299

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 92.4 bits (230), Expect = 1e-23
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV-QALFKIARGELPPIPDSV-- 84
              +     Y + AD+WS+G +++E+ T   PY   +   + L K+ + E P +P  +  
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGF 256

Query: 85  SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           S D + F+  CL  +   RP   +L+EH F+KR
Sbjct: 257 SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 90.4 bits (225), Expect = 4e-23
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 2/89 (2%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WVQALFKIARGELPPIPDSV-SRDA 88
                GY + +DIWS+G T++E+     PY       Q L ++     P +P    S + 
Sbjct: 184 ELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEF 243

Query: 89  RDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
            DF  +CL+ N  +RPT  +LM+HPF   
Sbjct: 244 VDFTSQCLKKNSKERPTYPELMQHPFFTL 272

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 90.8 bits (226), Expect = 5e-23
 Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 5/92 (5%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV-QALFKIARGELPPIPDSV----S 85
           ++   GY + +D+WS+G T+ E+ T   PY     V   L ++ +G+ P + +S     S
Sbjct: 200 SASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFS 259

Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
               +F+  CL  + + RP   +L++HPF+  
Sbjct: 260 PSFINFVNLCLTKDESKRPKYKELLKHPFILM 291

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 89.6 bits (222), Expect = 1e-22
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
               Y    DI+S+G  + E+L         E V+ +  +   + P +           +
Sbjct: 249 HGNNYSHKVDIFSLGLILFELLYSFSTQM--ERVRIITDVRNLKFPLLFTQKYPQEHMMV 306

Query: 93  LKCLQVNPNDRPTAAQLMEHPFVK 116
              L  +P +RP A  ++E+   +
Sbjct: 307 QDMLSPSPTERPEATDIIENAIFE 330

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 89.5 bits (222), Expect = 3e-22
 Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 7/100 (7%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL------P 78
           L +              DI+S+GC    +L++ +  FG +       I RG         
Sbjct: 204 LEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG-DKYSRESNIIRGIFSLDEMKC 262

Query: 79  PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP 118
               S+  +A D I + +  +P  RPTA +++ HP     
Sbjct: 263 LHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK 302

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 86.9 bits (215), Expect = 2e-21
 Identities = 30/134 (22%), Positives = 47/134 (35%), Gaps = 45/134 (33%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSV---- 84
           V+     GY   +DI+SVG T  E+     P+  +   Q L +   G +P + D+     
Sbjct: 206 VLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPA 265

Query: 85  -----------------------------------------SRDARDFILKCLQVNPNDR 103
                                                    S     F+ +CLQ NP+ R
Sbjct: 266 EELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDAR 325

Query: 104 PTAAQLMEHPFVKR 117
           P+A+ L+ H F K+
Sbjct: 326 PSASTLLNHSFFKQ 339

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 85.7 bits (213), Expect = 3e-21
 Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 10/113 (8%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRD 87
           V++ K  G+    D+WS+GC +  +L    P F    ++  + +I + E   IP  ++  
Sbjct: 186 VLSKK--GHSFEVDVWSIGCIMYTLLVGKPP-FETSCLKETYLRIKKNEYS-IPKHINPV 241

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLPTPHHFIMQS 135
           A   I K LQ +P  RPT  +L+   F         LP +     P   I  S
Sbjct: 242 AASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPS 294

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 83.7 bits (208), Expect = 8e-21
 Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRD 87
           +       +GL +D+WS+GC    +L    P F  + V+    K+   +   +P  +S +
Sbjct: 183 IATRS--AHGLESDVWSLGCMFYTLLIGRPP-FDTDTVKNTLNKVVLADYE-MPSFLSIE 238

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
           A+D I + L+ NP DR + + +++HPF+ R   T 
Sbjct: 239 AKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTK 273

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 83.1 bits (206), Expect = 3e-20
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 8/102 (7%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRD 87
           V++ K  G+    D+WS+GC +  +L    P F    ++  + +I + E   IP  ++  
Sbjct: 212 VLSKK--GHSFEVDVWSIGCIMYTLLVGKPP-FETSCLKETYLRIKKNEYS-IPKHINPV 267

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKR-PLPTSWGLPTP 128
           A   I K LQ +P  RPT  +L+   F     +P    LP  
Sbjct: 268 AASLIQKMLQTDPTARPTINELLNDEFFTSGYIPAR--LPIT 307

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 82.8 bits (205), Expect = 8e-20
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 5/88 (5%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSVSRDAR 89
              Y    D+WS G  +  +L    P FG +  Q +  K+ +G+         ++S +A+
Sbjct: 221 KKKYNEKCDVWSCGVIMYILLCGYPP-FGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAK 279

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           + I   L  + N R TA + +   ++K+
Sbjct: 280 ELIKLMLTYDYNKRCTAEEALNSRWIKK 307

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 82.8 bits (205), Expect = 1e-19
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSVSRDAR 89
              Y    D+WS+G  +  +L    P FG +  Q +  K+ +G+     P   +VS  A+
Sbjct: 211 RKKYDEKCDVWSIGVILFILLAGYPP-FGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAK 269

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVK 116
           D I + LQ +   R +A Q +EHP++K
Sbjct: 270 DLIKQMLQFDSQRRISAQQALEHPWIK 296

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 81.8 bits (202), Expect = 1e-19
 Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 5/93 (5%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSV 84
           V+N+ N  YG   D WS G  +  +L    P+ G         ++   +L    P  + +
Sbjct: 245 VLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPG-VNDADTISQVLNKKLCFENPNYNVL 303

Query: 85  SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           S  ARD +   L  N ++R  A + ++HP++ +
Sbjct: 304 SPLARDLLSNLLNRNVDERFDAMRALQHPWISQ 336

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 80.7 bits (200), Expect = 1e-19
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 3/89 (3%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDA 88
           ++  +   +    D+WS+G    E L    P+    + +   +I+R E    PD V+  A
Sbjct: 178 MIEGR--MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGA 234

Query: 89  RDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           RD I + L+ NP+ RP   +++EHP++  
Sbjct: 235 RDLISRLLKHNPSQRPMLREVLEHPWITA 263

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 80.7 bits (200), Expect = 1e-19
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL--PPIPDSVSRDARD 90
                   DIWS G  +  +LT C P+ G   ++ +  K    E         ++  A D
Sbjct: 199 KRDVTFKCDIWSAGVVMYFLLTGCLPFTG-TSLEEVQQKATYKEPNYAVECRPLTPQAVD 257

Query: 91  FILKCLQVNPNDRPTAAQLMEHPFVK 116
            + + L  +P  RP+AAQ++ H + K
Sbjct: 258 LLKQMLTKDPERRPSAAQVLHHEWFK 283

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 81.6 bits (201), Expect = 2e-19
 Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 8/98 (8%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIARGELPPIPD---- 82
           + +N+    +    + W +G ++  +     P+  V   ++  +K     +P        
Sbjct: 261 EFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFG 320

Query: 83  ---SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
               +    +  I + L  +   R    + ME P   +
Sbjct: 321 SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ 358

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 81.7 bits (202), Expect = 2e-19
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSVSR 86
           +    GY    D WS+G  +   L+   P+       +L  +I  G+    P +   VS 
Sbjct: 315 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 374

Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
            A D + K L V+P  R T  + + HP+++
Sbjct: 375 KALDLVKKLLVVDPKARFTTEEALRHPWLQ 404

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 81.2 bits (200), Expect = 2e-19
 Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 5/85 (5%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           +        D W++G  +  +     P      +     I R        ++ +  R  +
Sbjct: 286 RRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRS-----CKNIPQPVRALL 340

Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKR 117
              L+    DR    Q ME P  ++
Sbjct: 341 EGFLRYPKEDRLLPLQAMETPEYEQ 365

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 81.3 bits (201), Expect = 3e-19
 Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 5/100 (5%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSVSRDAR 89
           +G Y    D+WS G  +  +L+ C P+ G      +  K+ +G+     P    VS  A+
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSGCPPFNG-ANEYDILKKVEKGKYTFELPQWKKVSESAK 259

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPH 129
           D I K L   P+ R +A   ++H +++        +  P 
Sbjct: 260 DLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPS 299

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 80.5 bits (199), Expect = 6e-19
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSVSRDAR 89
            G Y    D+WS G  +  +L+   P F  +    +  ++  G+     P   ++S DA+
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPP-FYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVK 116
           D I K L  +P+ R TA Q +EHP+++
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQ 281

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 78.9 bits (195), Expect = 9e-19
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 3/96 (3%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIARGEL-PPIPDSVSRDA 88
              +       D+WS+GC +  M+    PY  V +   ++    + +L  P     S   
Sbjct: 217 VQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSAL 276

Query: 89  RDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPTSW 123
              +   + V+P+ RP    L+     ++ P P   
Sbjct: 277 WQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQH 312

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 77.2 bits (191), Expect = 4e-18
 Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALF-KIARGEL---PPIPDSVSRD 87
               Y    D WS+G     +L  C  P F  E    LF KI  G      P  D +S  
Sbjct: 180 AQKPYSKAVDCWSIGVITYILL--CGYPPFYEETESKLFEKIKEGYYEFESPFWDDISES 237

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
           A+DFI   L+ +PN+R T  + + HP++ 
Sbjct: 238 AKDFICHLLEKDPNERYTCEKALSHPWID 266

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 76.5 bits (189), Expect = 5e-18
 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 5/93 (5%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRD 87
           ++  K   +    D+W  G    E L    P F          +I   +L   P  +S  
Sbjct: 183 MIEGK--THDEKVDLWCAGVLCYEFLVGMPP-FDSPSHTETHRRIVNVDLK-FPPFLSDG 238

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 120
           ++D I K L+ +P  R     +MEHP+VK    
Sbjct: 239 SKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR 271

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 77.1 bits (190), Expect = 5e-18
 Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 6/97 (6%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-PIPDSVSRDARDF 91
            N   G   DIW++GC +  +  R  P+       A  +I  G+   P  D+        
Sbjct: 226 SNFPIGEKQDIWALGCILYLLCFRQHPFED----GAKLRIVNGKYSIPPHDTQYTVFHSL 281

Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 128
           I   LQVNP +R + A+++           +    +P
Sbjct: 282 IRAMLQVNPEERLSIAEVVHQLQEIAAAR-NVNPKSP 317

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 77.0 bits (190), Expect = 8e-18
 Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 6/85 (7%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSVSRDARDF 91
            YG P D+W  G  +  +L+ C P++G +  + LF  I +G+    P     +S  A+D 
Sbjct: 209 PYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKGKYKMNPRQWSHISESAKDL 266

Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVK 116
           + + L ++P +R T  + + HP++K
Sbjct: 267 VRRMLMLDPAERITVYEALNHPWLK 291

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 76.6 bits (189), Expect = 9e-18
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSVSR 86
           +    GY    D WS+G  +   L+   P+       +L  +I  G+    P +   VS 
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249

Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
            A D + K L V+P  R T  + + HP+++
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQ 279

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 75.7 bits (187), Expect = 1e-17
 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 5/93 (5%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSVSRDAR 89
            G YG   D WS G  +  +L    P+        +  KI  G          +VS  A 
Sbjct: 181 EGLYGPECDEWSAGVMMYVLLCGYPPFSA-PTDSEVMLKIREGTFTFPEKDWLNVSPQAE 239

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
             I + L  +P  R T+ Q +EH + ++ L +S
Sbjct: 240 SLIRRLLTKSPKQRITSLQALEHEWFEKQLSSS 272

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 75.8 bits (187), Expect = 2e-17
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 4/88 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSVSRDA 88
           +   YG   D+WSVG     +L    P++     Q +F +I   E     P  D VS +A
Sbjct: 223 RGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNA 282

Query: 89  RDFILKCLQVNPNDRPTAAQLMEHPFVK 116
           +D + K + ++P  R T  Q ++HP+V 
Sbjct: 283 KDLVRKLIVLDPKKRLTTFQALQHPWVT 310

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 75.2 bits (185), Expect = 3e-17
 Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 19/107 (17%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---------- 77
             ++++   G   DIWS+G  +  M     P+     +  LF  I    +          
Sbjct: 221 FFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFL 280

Query: 78  --------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
                       + +S +  DF+   L+ NP +R T+   ++H ++ 
Sbjct: 281 YPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLA 327

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 73.8 bits (182), Expect = 5e-17
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 5/87 (5%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL--PPIP-DSVSRDAR 89
            G Y    D+WS G  +  +L+   P++G +    +  ++  G+         ++S DA+
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFYG-KNEYDILKRVETGKYAFDLPQWRTISDDAK 254

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVK 116
           D I K L  +P+ R TA Q +EHP+++
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQ 281

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 73.8 bits (182), Expect = 6e-17
 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%)

Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSVS 85
           +N  + GYG   D+WS G  +  +L    P F       +   I  G      P  D  S
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPP-FWHRKQMLMLRMIMSGNYQFGSPEWDDYS 257

Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
              +D + + L V P  R TA + + HPF ++
Sbjct: 258 DTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 74.6 bits (184), Expect = 7e-17
 Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 5/85 (5%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELP-PIP--DSVSRDARDF 91
            YG P D+W+ G  +  +L    P++  E    L+ +I  G    P P  D+V+ +A+D 
Sbjct: 189 PYGKPVDLWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL 247

Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVK 116
           I K L +NP+ R TAA+ ++HP++ 
Sbjct: 248 INKMLTINPSKRITAAEALKHPWIS 272

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 73.5 bits (181), Expect = 9e-17
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 17/107 (15%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG------VEWVQALF-KIARGEL---PPIPD 82
              GY    D+WS+G  +  ML+   P+              +  KI +G+         
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWK 241

Query: 83  SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK-------RPLPTS 122
           +VS++A+D I   L V+PN R   + L  + +++        PL T 
Sbjct: 242 NVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTP 288

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 73.5 bits (181), Expect = 1e-16
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGV--EWVQALF-KIARGELP-PIP--DSVSRDAR 89
           GY    DIWS+G  +  MLT   P+     +  + +  +I  G+        +SVS  A+
Sbjct: 196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           D + K L V+P+ R TAA ++ HP++  
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRHPWIVH 283

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 73.6 bits (180), Expect = 2e-16
 Identities = 14/83 (16%), Positives = 26/83 (31%), Gaps = 5/83 (6%)

Query: 35  GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILK 94
                  D W++G  +  +     P      +     I R        ++ +  R  +  
Sbjct: 292 TLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRS-----CKNIPQPVRALLEG 346

Query: 95  CLQVNPNDRPTAAQLMEHPFVKR 117
            L+    DR    Q ME P  ++
Sbjct: 347 FLRYPKEDRLLPLQAMETPEYEQ 369

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 73.2 bits (180), Expect = 2e-16
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSVSRDARDF 91
           GYG   D+W+ G  +  +L    P F       +   I  G+     P  D  S   +D 
Sbjct: 281 GYGKEVDLWACGVILFTLLAGSPP-FWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDL 339

Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVKR 117
           I + LQV+P  R TA Q ++HPF +R
Sbjct: 340 ISRLLQVDPEARLTAEQALQHPFFER 365

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 71.8 bits (177), Expect = 3e-16
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 5/85 (5%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARG--ELPPIP-DSVSRDARDF 91
            Y  P DIW+ G  +  +L    P++  E    L+ +I  G  + P    D+V+ +A+  
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFWD-EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL 241

Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVK 116
           I   L VNP  R TA Q ++ P++ 
Sbjct: 242 IDSMLTVNPKKRITADQALKVPWIC 266

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 71.8 bits (177), Expect = 3e-16
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSV 84
           +VN +    GL AD+WS+G     +L+   P+ G E  Q     I+            + 
Sbjct: 182 IVNYE--PLGLEADMWSIGVITYILLSGASPFLG-ETKQETLTNISAVNYDFDEEYFSNT 238

Query: 85  SRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
           S  A+DFI + L  +P  R T AQ +EH ++K
Sbjct: 239 SELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 72.3 bits (178), Expect = 3e-16
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 5/85 (5%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELP-PIP--DSVSRDARDF 91
            Y  P DIW+ G  +  +L    P++  E    L+ +I  G    P P  D+V+ +A+  
Sbjct: 206 PYSKPVDIWACGVILYILLVGYPPFWD-EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL 264

Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVK 116
           I   L VNP  R TA Q ++ P++ 
Sbjct: 265 IDSMLTVNPKKRITADQALKVPWIC 289

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 71.9 bits (177), Expect = 3e-16
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 11/95 (11%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLE--MLTRCRPYFGVEWVQALF-KIARGEL---PPIPD 82
           ++N          D+W++G  ++   +LT   P+ G E  Q  +  I++  +        
Sbjct: 204 ILNYD--PITTATDMWNIG--IIAYMLLTHTSPFVG-EDNQETYLNISQVNVDYSEETFS 258

Query: 83  SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           SVS+ A DFI   L  NP  RPTA   + H ++++
Sbjct: 259 SVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 71.9 bits (177), Expect = 3e-16
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 7/90 (7%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWVQALF-KIARGELP-PIP--DSVSR 86
              Y    D+WS+G  +  +L    P++    +     +  +I  G+   P P    VS 
Sbjct: 172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 231

Query: 87  DARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
           + +  I   L+  P  R T  + M HP++ 
Sbjct: 232 EVKMLIRNLLKTEPTQRMTITEFMNHPWIM 261

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 71.2 bits (175), Expect = 6e-16
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 13/103 (12%)

Query: 35  GGY-GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
             Y  LPA +WS+G  + +M+    P+   +      +I   EL   P  VS D    I 
Sbjct: 213 HQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELH-FPAHVSPDCCALIR 265

Query: 94  KCLQVNPNDRPTAAQLMEHPFVKR-----PLPTSWGLPTPHHF 131
           +CL   P+ RP+  +++  P+++      PL  S G P P  +
Sbjct: 266 RCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNPSKGGPAPLAW 308

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 71.5 bits (176), Expect = 6e-16
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 7/94 (7%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSV 84
           V            D+WS+G  V  +L+   P+   E  Q +   I   E          +
Sbjct: 174 VHQHD--VVSTATDMWSLGTLVYVLLSGINPFLA-ETNQQIIENIMNAEYTFDEEAFKEI 230

Query: 85  SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP 118
           S +A DF+ + L      R TA++ ++HP++K+ 
Sbjct: 231 SIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 70.7 bits (174), Expect = 7e-16
 Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 36  GY-GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFIL 93
            Y G   DIWS G  +  +L    P F  E V  LF KI  G    IP+ ++R     ++
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLP-FDDEHVPTLFKKIRGGVFY-IPEYLNRSVATLLM 243

Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLP 120
             LQV+P  R T   + EH + K+ LP
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQDLP 270

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 71.1 bits (175), Expect = 8e-16
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 7/92 (7%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSV 84
           +VN +    GL AD+WS+G     +L+   P+ G +  Q     ++            + 
Sbjct: 188 IVNYE--PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNT 244

Query: 85  SRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
           S  A+DFI + L  +P  R T    ++HP++K
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 70.8 bits (174), Expect = 9e-16
 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 29  VVNSKNGGY-GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELP-PIPDSVS 85
            ++     + G   D+W++G T+   +    P F  E +  L  KI    L  P    ++
Sbjct: 208 SLSETRKIFSGKALDVWAMGVTLYCFVFGQCP-FMDERIMCLHSKIKSQALEFPDQPDIA 266

Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
            D +D I + L  NP  R    ++  HP+V R
Sbjct: 267 EDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 70.8 bits (174), Expect = 9e-16
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 4/102 (3%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRD 87
           + N  +   G   DIWS G T+  + T   P+ G + +  LF  I +G    IP      
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG-DNIYKLFENIGKGSYA-IPGDCGPP 239

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPTSWGLPTP 128
             D +   L+  P  R +  Q+ +H  F K+  P    +P P
Sbjct: 240 LSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIP 281

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 70.4 bits (173), Expect = 1e-15
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 7/83 (8%)

Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ 97
           G  A +WS+G  + +M+    P+   E      +I RG++      VS + +  I  CL 
Sbjct: 227 GRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF-FRQRVSSECQHLIRWCLA 279

Query: 98  VNPNDRPTAAQLMEHPFVKRPLP 120
           + P+DRPT  ++  HP+++  L 
Sbjct: 280 LRPSDRPTFEEIQNHPWMQDVLL 302

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 70.9 bits (174), Expect = 1e-15
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 5/92 (5%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSV 84
           ++V+ +    G   D+W++G     +L+   P+ G + ++ L  + R +         SV
Sbjct: 220 EIVDRE--PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV 277

Query: 85  SRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
           S +A+DFI   LQ  P  R T    +EHP++K
Sbjct: 278 SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 70.8 bits (174), Expect = 1e-15
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 7/92 (7%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSV 84
           +VN +    GL AD+WS+G     +L+   P F  +  Q     I               
Sbjct: 189 IVNYE--PLGLEADMWSIGVITYILLSGASP-FLGDTKQETLANITAVSYDFDEEFFSQT 245

Query: 85  SRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
           S  A+DFI K L      R T  + + HP++ 
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 70.4 bits (173), Expect = 1e-15
 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSV 84
           +VN +    GL AD+WS+G     +L+   P+ G +  Q     I               
Sbjct: 189 IVNYE--PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANITSVSYDFDEEFFSHT 245

Query: 85  SRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
           S  A+DFI K L      R T  + + HP++ 
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 70.6 bits (173), Expect = 1e-15
 Identities = 30/128 (23%), Positives = 45/128 (35%), Gaps = 43/128 (33%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQA------------------------ 68
           +   Y + +DIWS+G +++EM     P    +  +                         
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262

Query: 69  ------------------LFKIARGELPPIPDSV-SRDARDFILKCLQVNPNDRPTAAQL 109
                             L  I     P +P  V S + +DF+ KCL  NP +R    QL
Sbjct: 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 322

Query: 110 MEHPFVKR 117
           M H F+KR
Sbjct: 323 MVHAFIKR 330

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 70.0 bits (172), Expect = 2e-15
 Identities = 29/112 (25%), Positives = 42/112 (37%), Gaps = 19/112 (16%)

Query: 36  GYGLPADIWSVG-------C-------TVLEMLTRCRPYFGVEWVQALF-KIARGELP-P 79
            Y    D+WS+G                        R          LF  I  G+   P
Sbjct: 202 IYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFP 261

Query: 80  IP--DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPH 129
                 +S  A+D I K L  +   R +AAQ+++HP+V+   P +  LPTP 
Sbjct: 262 DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN-TLPTPM 312

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 70.1 bits (172), Expect = 2e-15
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 14/101 (13%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFG---VEWVQALF-KIARGELP-PIP--DSVSRDA 88
            Y    D+WS+G  +  +L    P++          +  +I  G+   P P    VS DA
Sbjct: 205 KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDA 264

Query: 89  RDFILKCLQVNPNDRPTAAQLMEHPFVK-------RPLPTS 122
           +  I   L+ +P +R T  Q M HP++         PL T+
Sbjct: 265 KQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 305

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 69.6 bits (171), Expect = 2e-15
 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 4/87 (4%)

Query: 36  GY-GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFIL 93
            Y G   D+WS G  +  ML    P F  E++  LF K+       +PD +S  A+  I 
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLP-FDDEFIPNLFKKVNSCVYV-MPDFLSPGAQSLIR 240

Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLP 120
           + +  +P  R T  ++   P+    LP
Sbjct: 241 RMIVADPMQRITIQEIRRDPWFNVNLP 267

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 69.2 bits (170), Expect = 3e-15
 Identities = 29/117 (24%), Positives = 41/117 (35%), Gaps = 33/117 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR--------------------- 74
           YG   D+W++GC V EM     P F G   +  L+ I                       
Sbjct: 202 YGKAVDVWAIGCLVTEMFMG-EPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260

Query: 75  GELPPIPD---------SVSRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPT 121
             LP I +          +S    D   KCL ++P+ RP  A+L+ H  F       
Sbjct: 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAE 317

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 69.4 bits (170), Expect = 4e-15
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 4/87 (4%)

Query: 36  GY-GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFIL 93
            Y G   DIWS G  +  +L    P F  + V  LF KI  G     P  ++      + 
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLP-FDDDHVPTLFKKICDGIFY-TPQYLNPSVISLLK 248

Query: 94  KCLQVNPNDRPTAAQLMEHPFVKRPLP 120
             LQV+P  R T   + EH + K+ LP
Sbjct: 249 HMLQVDPMKRATIKDIREHEWFKQDLP 275

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 69.3 bits (170), Expect = 5e-15
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 6/91 (6%)

Query: 29  VVNSKNG-GYGLPADIWSVGCTVLEMLTRCRPYFGV--EWVQALF-KIARGELPPIPDSV 84
           + +S+ G GY    D WS+G T  E+L   RPY        + +        +   P + 
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVV-TYPSAW 243

Query: 85  SRDARDFILKCLQVNPNDR-PTAAQLMEHPF 114
           S++    + K L+ NP+ R    + +   P+
Sbjct: 244 SQEMVSLLKKLLEPNPDQRFSQLSDVQNFPY 274

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 68.6 bits (168), Expect = 7e-15
 Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 14/104 (13%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWVQALF-KIARGELP-PIP--DSVS 85
               Y    D+WS+G  +  +L    P++    +     +  +I  G+   P P    VS
Sbjct: 236 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 295

Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEHPFVK-------RPLPTS 122
            + +  I   L+  P  R T  + M HP++         PL TS
Sbjct: 296 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 339

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 68.7 bits (168), Expect = 7e-15
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL---PPIPDSV 84
           V   K    G   D+WSVG     +L+   P+ G E        +   +          +
Sbjct: 327 VAEGKP--VGYYTDMWSVGVLSYILLSGLSPFGG-ENDDETLRNVKSCDWNMDDSAFSGI 383

Query: 85  SRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
           S D +DFI K L  +PN R T  Q +EHP++ 
Sbjct: 384 SEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 68.1 bits (167), Expect = 1e-14
 Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 3/84 (3%)

Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFILKCL 96
           G   D+WS+G  +  +++   P F  + ++ L  ++ RG+   IP  +S D  + + + L
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKRFL 249

Query: 97  QVNPNDRPTAAQLMEHPFVKRPLP 120
            +NP  R T  Q+M+  ++     
Sbjct: 250 VLNPIKRGTLEQIMKDRWINAGHE 273

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 67.2 bits (165), Expect = 2e-14
 Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 45/134 (33%)

Query: 23  NSLTDQVV-----------NSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALF 70
           +   D+V                  YG P D+W++GC   E+L+   P + G   V  L+
Sbjct: 157 DYYDDEVATRWYRSPELLVGDTQ--YGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLY 213

Query: 71  KIAR-------------GELP-----PIPD------------SVSRDARDFILKCLQVNP 100
            I +                       IPD            ++S  A   +  CL ++P
Sbjct: 214 LIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDP 273

Query: 101 NDRPTAAQLMEHPF 114
            +R T  QL+ HP+
Sbjct: 274 TERLTCEQLLHHPY 287

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 67.4 bits (165), Expect = 2e-14
 Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLE--MLTRCRPYFGVEWVQALF-KIARGEL---PPIP 81
           +VVN        P D+WSVG  V+   +L+   P+ G +        I            
Sbjct: 258 EVVNYD--FVSFPTDMWSVG--VIAYMLLSGLSPFLG-DNDAETLNNILACRWDLEDEEF 312

Query: 82  DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
             +S +A++FI K L    + R +A++ ++HP++ 
Sbjct: 313 QDISEEAKEFISKLLIKEKSWRISASEALKHPWLS 347

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 66.8 bits (164), Expect = 2e-14
 Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 30/114 (26%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR-------------GELP---- 78
           Y    D+WS GC   E+    RP F G +    L +I R              +LP    
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238

Query: 79  ----PIPDSV-------SRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLP 120
               P   S+       +   RD +   L+ NP  R +A + ++HP F     P
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 66.5 bits (163), Expect = 4e-14
 Identities = 27/115 (23%), Positives = 39/115 (33%), Gaps = 32/115 (27%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR-------------GELP---- 78
           Y    DIWS+ C   EML +  P F G   +  LFKI                 LP    
Sbjct: 215 YSTSVDIWSIACIWAEMLMK-TPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQ 273

Query: 79  ------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLP 120
                        +   +  +  D +   L+++P  R +A   +EHP F      
Sbjct: 274 SFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDFD 328

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 66.1 bits (162), Expect = 4e-14
 Identities = 33/130 (25%), Positives = 48/130 (36%), Gaps = 37/130 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR-------------GELP---- 78
           Y    DIWS GC + EM+T  +P F G    + L  I                +LP    
Sbjct: 186 YSTSIDIWSCGCILAEMITG-KPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNP 244

Query: 79  ----------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPT 121
                              + +  +  DF+   LQ+NP+ R +A Q + HP F +     
Sbjct: 245 NIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHA 304

Query: 122 S-WGLPTPHH 130
           S  G  + HH
Sbjct: 305 SMGGSRSHHH 314

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 65.9 bits (161), Expect = 6e-14
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 7/83 (8%)

Query: 38  GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ 97
           G   ++WS+G T+  ++    P+  +E      +     +   P  VS++    +   LQ
Sbjct: 208 GPELEMWSLGVTLYTLVFEENPFCELE------ETVEAAIH-PPYLVSKELMSLVSGLLQ 260

Query: 98  VNPNDRPTAAQLMEHPFVKRPLP 120
             P  R T  +L+  P+V +P+ 
Sbjct: 261 PVPERRTTLEKLVTDPWVTQPVN 283

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 65.3 bits (160), Expect = 7e-14
 Identities = 18/89 (20%), Positives = 31/89 (34%), Gaps = 5/89 (5%)

Query: 36  GY-GLPADIWSVGCTVLEMLTRCRPYF--GVEWVQALFKIARGELPPIP-DSVSRDARDF 91
            +   P D+WS G  +  ML    P +    +  Q        +    P   +       
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241

Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVKRPLP 120
           + K L  NP+ R T   + +  +  +PL 
Sbjct: 242 LHKILVENPSARITIPDIKKDRWYNKPLK 270

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 65.4 bits (160), Expect = 8e-14
 Identities = 18/89 (20%), Positives = 31/89 (34%), Gaps = 5/89 (5%)

Query: 36  GY-GLPADIWSVGCTVLEMLTRCRPYF--GVEWVQALFKIARGELPPIP-DSVSRDARDF 91
            +   P D+WS G  +  ML    P +    +  Q        +    P   +       
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241

Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVKRPLP 120
           + K L  NP+ R T   + +  +  +PL 
Sbjct: 242 LHKILVENPSARITIPDIKKDRWYNKPLK 270

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 65.4 bits (160), Expect = 8e-14
 Identities = 29/115 (25%), Positives = 43/115 (37%), Gaps = 37/115 (32%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR--------------------- 74
           Y    D+WS+GC +  M+ R  P+F G +    L +IA+                     
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 267

Query: 75  -----GELPPIP----------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
                G                  VS +A DF+ K L+ +   R TA + MEHP+
Sbjct: 268 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 322

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 64.6 bits (158), Expect = 2e-13
 Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 31/112 (27%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI------------------ARG- 75
            Y    D+W+ GC   EMLT  +  F G   ++ +  I                      
Sbjct: 201 NYTKAIDMWAAGCIFAEMLTG-KTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVY 259

Query: 76  --ELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
                  P          +SR+A DF+ + L  +P DR TA + + HP++  
Sbjct: 260 IRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSI 311

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 64.2 bits (157), Expect = 2e-13
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 11/93 (11%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRD 87
           ++  K       +D+W++GC + +++    P+        +F KI + E    P+     
Sbjct: 203 LLTEK--SACKSSDLWALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEY-DFPEKFFPK 258

Query: 88  ARDFILKCLQVNPNDRPT------AAQLMEHPF 114
           ARD + K L ++   R           L  HPF
Sbjct: 259 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 291

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 64.4 bits (157), Expect = 2e-13
 Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 30/108 (27%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-------------------ARGE 76
           Y    D+WS+GC   E++   +P F G   +  L +I                       
Sbjct: 219 YTPSIDLWSIGCVFGELILG-KPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVR 277

Query: 77  LPPI---------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV 115
            P +         P+     A D + + L+  P+ R    + M HPF 
Sbjct: 278 FPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 64.2 bits (157), Expect = 2e-13
 Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 33/113 (29%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI--------------------AR 74
            Y    D+WS GC + E+  R RP F G ++   L  I                    AR
Sbjct: 199 KYSRAMDVWSCGCILAELFLR-RPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAR 257

Query: 75  G---ELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
                LP  P          V+    D + + L  +P  R TA + +EHP+++
Sbjct: 258 EYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 63.9 bits (156), Expect = 3e-13
 Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 32/112 (28%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-------------------ARG 75
            Y    DIWSVGC + EMLT  +  F G +++  L +I                   A+ 
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTG-KTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 258

Query: 76  ---ELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
               LP  P           S  A D + K L+++ + R TAAQ + HPF +
Sbjct: 259 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 63.7 bits (156), Expect = 3e-13
 Identities = 31/115 (26%), Positives = 41/115 (35%), Gaps = 31/115 (26%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR-------------GELP---- 78
           Y    DIWS+GC   EM+TR R  F G   +  LF+I R               +P    
Sbjct: 181 YSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239

Query: 79  --------PIPDSV---SRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPT 121
                        V     D R  + + L  +PN R +A   + HP F     P 
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 63.8 bits (156), Expect = 3e-13
 Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 31/122 (25%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR-------------GELP---- 78
           YG+  D+W+VGC + E+L R  P+  G   +  L +I                 LP    
Sbjct: 190 YGVGVDMWAVGCILAELLLR-VPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 248

Query: 79  -------PIPDSV---SRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPTSWG-LP 126
                  P+         D  D I      NP  R TA Q ++   F  RP PT    LP
Sbjct: 249 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLP 308

Query: 127 TP 128
            P
Sbjct: 309 RP 310

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 63.8 bits (156), Expect = 4e-13
 Identities = 24/112 (21%), Positives = 35/112 (31%), Gaps = 33/112 (29%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-------------------ARGE 76
           Y    DIWSVGC   EM+    P F G      L +I                      +
Sbjct: 209 YTTAVDIWSVGCIFAEMMLG-EPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVD 267

Query: 77  LPPIP------------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
           L                   +++A D +   LQ  P +R    + + HP+  
Sbjct: 268 LYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFD 319

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 63.6 bits (155), Expect = 4e-13
 Identities = 23/107 (21%), Positives = 33/107 (30%), Gaps = 30/107 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-------------------ARGE 76
           Y    D+WS GC + E+L   +P F G   V  L +I                      +
Sbjct: 234 YTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 292

Query: 77  LPPIP---------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
            P I               +A     + L+  P  R T  +   H F
Sbjct: 293 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 63.5 bits (155), Expect = 4e-13
 Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 32/112 (28%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-------------------ARG 75
            Y    DIWSVGC + EM+T  +  F G + +  L +I                   A+ 
Sbjct: 202 RYTQTVDIWSVGCIMAEMITG-KTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 260

Query: 76  ---ELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
               LP +          + S  A + + K L ++   R TA + + HP+ +
Sbjct: 261 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 63.5 bits (155), Expect = 4e-13
 Identities = 28/113 (24%), Positives = 40/113 (35%), Gaps = 33/113 (29%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIA--------------------- 73
           G+    D+WS GC + EM  R +  F G  +   L KI                      
Sbjct: 210 GFTKLVDMWSAGCVMAEMFNR-KALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARD 268

Query: 74  --RGELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
             R  L  +P         +    A D I K L+ NP  R +  Q + HP+ +
Sbjct: 269 YLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 63.5 bits (155), Expect = 5e-13
 Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 32/112 (28%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-------------------ARG 75
           GY    DIWSVGC + EML+  RP F G  ++  L  I                   AR 
Sbjct: 208 GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266

Query: 76  ---ELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
               LP            +    A D + K L  NP+ R    Q + HP+++
Sbjct: 267 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 63.6 bits (155), Expect = 5e-13
 Identities = 26/134 (19%), Positives = 42/134 (31%), Gaps = 47/134 (35%)

Query: 36  GYGLPADIWSVGCTVLEMLT---------------------------------------R 56
            +G  ADIWS  C + E++T                                        
Sbjct: 211 PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKY 270

Query: 57  CRPYF---GVEWVQALFKIARGE-----LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQ 108
            R +F   G+    +  K    E             +++  DF+   LQ++P  R  A  
Sbjct: 271 TRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330

Query: 109 LMEHPFVKRPLPTS 122
           L+ HP++K  L   
Sbjct: 331 LVNHPWLKDTLGME 344

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 63.1 bits (154), Expect = 6e-13
 Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 32/112 (28%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-------------------ARG 75
            Y    DIWSVGC + E+LT  R  F G + +  L  I                   AR 
Sbjct: 206 HYNQTVDIWSVGCIMAELLTG-RTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264

Query: 76  ---ELPPIPD--------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
               L  +P           +  A D + K L ++ + R TAAQ + H +  
Sbjct: 265 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 62.5 bits (153), Expect = 8e-13
 Identities = 32/107 (29%), Positives = 41/107 (38%), Gaps = 30/107 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR-------------GELP---- 78
           Y    DIWSVGC   EM+    P F GV     L +I R              ELP    
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236

Query: 79  --------PIPDSV---SRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
                   P    +        D + K L+++PN R TA Q +EH +
Sbjct: 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 62.6 bits (153), Expect = 9e-13
 Identities = 36/123 (29%), Positives = 43/123 (34%), Gaps = 30/123 (24%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR-------------GELP---- 78
           Y  P D+WSVGC   EM  R +P F G   V  L KI                 LP    
Sbjct: 196 YATPVDLWSVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF 254

Query: 79  ------PIPDSV---SRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPT-SWGLPT 127
                 PI   V       +D +LKCL  NP  R +A   + HP F        +     
Sbjct: 255 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKENLDSHL 314

Query: 128 PHH 130
           P  
Sbjct: 315 PPS 317

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 62.3 bits (152), Expect = 9e-13
 Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA---RGELPPIPDSVS 85
            + ++   Y   AD +S    +  +LT   P+    + +  F       G  P IP+   
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCP 256

Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEH 112
              R+ I  C   +P  RP  + +++ 
Sbjct: 257 PRLRNVIELCWSGDPKKRPHFSYIVKE 283

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 62.3 bits (152), Expect = 1e-12
 Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 30/107 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-------------------ARGE 76
           Y    DIWS GC + E++   +P F G   +  L +I                      +
Sbjct: 219 YTTNIDIWSTGCVMAELMQG-QPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHK 277

Query: 77  LPPIP---------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
            P I               DA D I + L+  P+ R TA + + HPF
Sbjct: 278 FPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 61.6 bits (150), Expect = 2e-12
 Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPD-SVSRDARDFILKCLQVN 99
           +D++++G    E+  R  P+        ++++  G  P +    + ++  D +L C    
Sbjct: 224 SDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFE 283

Query: 100 PNDRPTAAQLMEH 112
             +RPT  +LM+ 
Sbjct: 284 QEERPTFTKLMDM 296

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 30/108 (27%), Positives = 40/108 (37%), Gaps = 31/108 (28%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR-------------GELP---- 78
           Y    DIWS+GC   EM+T  +P F GV     L KI                ELP    
Sbjct: 197 YSTSVDIWSIGCIFAEMITG-KPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255

Query: 79  ---------PIPDSV---SRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
                    P    +    ++  D +   L  +PN R +A   M HP+
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 61.3 bits (149), Expect = 2e-12
 Identities = 18/106 (16%), Positives = 31/106 (29%), Gaps = 28/106 (26%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF----GVEWVQALFKIARGELP------------- 78
            YG   D+WS+G T     T   P+          + ++KI  G+               
Sbjct: 199 KYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGP 258

Query: 79  -------PIPDSVSRDARD----FILKCLQVNPNDRPTAAQLMEHP 113
                  P+  S+SR  +      +   L+ +        Q     
Sbjct: 259 IDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 61.2 bits (149), Expect = 3e-12
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 10/95 (10%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV---EWVQALF-KIARGELPPIPDSV 84
           +V   + G+    D WS+G  + E+LT   P+           +  +I + E P  P  +
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP-YPQEM 289

Query: 85  SRDARDFILKCLQVNPNDR----PT-AAQLMEHPF 114
           S  A+D I + L  +P  R    P  A ++ EH F
Sbjct: 290 SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 61.0 bits (149), Expect = 3e-12
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 8/85 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFILK 94
           G+    D WS+G  + +MLT   P F  E  +    KI + +L  +P  ++++ARD + K
Sbjct: 197 GHNRAVDWWSLGALMYDMLT-GAPPFTGENRKKTIDKILKCKLN-LPPYLTQEARDLLKK 254

Query: 95  CLQVNPNDR----PT-AAQLMEHPF 114
            L+ N   R    P  A ++  HPF
Sbjct: 255 LLKRNAASRLGAGPGDAGEVQAHPF 279

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 61.1 bits (148), Expect = 4e-12
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 9/91 (9%)

Query: 32  SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--VQALF-KIARGELPPIPDSVSRDA 88
            K   Y   AD +S+GC + ++L    P+   +      +        +  +PDS S + 
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-ELPDSFSPEL 421

Query: 89  RDFILKCLQVNPNDR-----PTAAQLMEHPF 114
           R  +   LQ + N R       A ++ E PF
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 452

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 60.8 bits (148), Expect = 5e-12
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 10/93 (10%)

Query: 36  GY-GLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFK-----IARGELPPIPDS--VSRD 87
            Y G  AD+WS G T+  ML    P F        ++     I   +   IPD   +S +
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVGAYP-FEDPEEPRDYRKTIQRILSVKYS-IPDDIRISPE 250

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 120
               I +    +P  R +  ++  H +  + LP
Sbjct: 251 CCHLISRIFVADPATRISIPEIKTHSWFLKNLP 283

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 60.3 bits (147), Expect = 5e-12
 Identities = 30/122 (24%), Positives = 37/122 (30%), Gaps = 31/122 (25%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR-------------GELP---- 78
           Y    D+W VGC   EM T  RP F G    + L  I R                     
Sbjct: 178 YSTQIDMWGVGCIFYEMATG-RPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT 236

Query: 79  ---------PIPDSVSR---DARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 126
                     +     R   D  D + K LQ    +R +A   M+HPF          LP
Sbjct: 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLP 296

Query: 127 TP 128
             
Sbjct: 297 DT 298

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 60.3 bits (147), Expect = 6e-12
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFILK 94
           G+   AD WS G  + EMLT     F  +  +     I + +L  +P  +S +A+  +  
Sbjct: 202 GHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKETMTMILKAKLG-MPQFLSPEAQSLLRM 259

Query: 95  CLQVNPNDR----PT-AAQLMEHPF 114
             + NP +R    P    ++  H F
Sbjct: 260 LFKRNPANRLGAGPDGVEEIKRHSF 284

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 59.9 bits (146), Expect = 7e-12
 Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 28/105 (26%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR-------------GELP---- 78
           Y  P D+WSVGC   EM  R +P F G      L KI                 LP    
Sbjct: 196 YATPVDMWSVGCIFAEMFRR-KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAF 254

Query: 79  ------PIPDSV---SRDARDFILKCLQVNPNDRPTAAQLMEHPF 114
                 P+   V          +L+ L  NP+ R +A + ++H +
Sbjct: 255 PPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 60.0 bits (146), Expect = 7e-12
 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 3/92 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIPDSVSRDARDF 91
           ++      +D++S G  + E+ T  +P+  +   Q +  +        IP +++      
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAI 271

Query: 92  ILKCLQVNPNDRPTAAQLMEH--PFVKRPLPT 121
           I  C    P  RP+ A +M+   P +K  +P 
Sbjct: 272 IEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 60.0 bits (146), Expect = 7e-12
 Identities = 15/82 (18%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--VQALFKIARGELPPIPDSVSRDARD 90
           +   Y    D++S G  + E++TR +P+  +     + ++ +  G  PP+  ++ +    
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIES 235

Query: 91  FILKCLQVNPNDRPTAAQLMEH 112
            + +C   +P+ RP+  ++++ 
Sbjct: 236 LMTRCWSKDPSQRPSMEEIVKI 257

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 59.9 bits (146), Expect = 8e-12
 Identities = 29/128 (22%), Positives = 41/128 (32%), Gaps = 35/128 (27%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIAR-------------GELP---- 78
           YG P D+W  GC + EM TR  P   G      L  I++                     
Sbjct: 206 YGPPIDLWGAGCIMAEMWTR-SPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEK 264

Query: 79  -----PIPDSV---------SRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLPTSW 123
                     V            A D I K L ++P  R  +   + H  F   P+P+  
Sbjct: 265 LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDL 324

Query: 124 -GLPTPHH 130
            G+ + H 
Sbjct: 325 KGMLSTHL 332

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 59.2 bits (144), Expect = 1e-11
 Identities = 17/81 (20%), Positives = 37/81 (45%), Gaps = 1/81 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA-RGELPPIPDSVSRDARDF 91
           +   +   +D+WS G  + E+LT   P+ G++ +   + +A      PIP +        
Sbjct: 187 RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKL 246

Query: 92  ILKCLQVNPNDRPTAAQLMEH 112
           +  C   +P+ RP+   +++ 
Sbjct: 247 MEDCWNPDPHSRPSFTNILDQ 267

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 59.3 bits (144), Expect = 1e-11
 Identities = 23/125 (18%), Positives = 40/125 (32%), Gaps = 43/125 (34%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-------------------- 72
             GY    DIWSVGC + EM+      F G + +    K+                    
Sbjct: 200 GMGYKENVDIWSVGCIMGEMIKG-GVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 258

Query: 73  ----ARGELPPIP-----------------DSVSRDARDFILKCLQVNPNDRPTAAQLME 111
                R +                         +  ARD + K L ++ + R +  + ++
Sbjct: 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318

Query: 112 HPFVK 116
           HP++ 
Sbjct: 319 HPYIN 323

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 59.5 bits (144), Expect = 1e-11
 Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 43/125 (34%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-------------------- 72
             GY    DIWSVGC + EM+   +  F G +++    K+                    
Sbjct: 237 GMGYKENVDIWSVGCIMGEMVRH-KILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295

Query: 73  ----ARGELPPIP-----------------DSVSRDARDFILKCLQVNPNDRPTAAQLME 111
                R +   +                     +  ARD + K L ++P  R +    ++
Sbjct: 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355

Query: 112 HPFVK 116
           HP++ 
Sbjct: 356 HPYIN 360

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 58.8 bits (143), Expect = 2e-11
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 7/84 (8%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFILK 94
            Y    D W +G  + EML    P F       ++  I    L  +  +++  AR  +  
Sbjct: 215 PYDRTVDWWCLGAVLYEMLY-GLPPFYSRNTAEMYDNILNKPLQ-LKPNITNSARHLLEG 272

Query: 95  CLQVNPNDR----PTAAQLMEHPF 114
            LQ +   R        ++  H F
Sbjct: 273 LLQKDRTKRLGAKDDFMEIKSHVF 296

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 58.9 bits (143), Expect = 2e-11
 Identities = 21/126 (16%), Positives = 44/126 (34%), Gaps = 45/126 (35%)

Query: 36  GYGLPADIWSVGCTVLEMLT-----------------------------------RCRPY 60
           G+ + +D+WS GC + E+ T                                       Y
Sbjct: 235 GWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKY 294

Query: 61  FGVEWVQALF---------KIARGELPPIPDSVSRDA-RDFILKCLQVNPNDRPTAAQLM 110
              + ++  +              +  P+   +  +   DF+   LQ++P  RP+ A+L+
Sbjct: 295 VNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELL 354

Query: 111 EHPFVK 116
           +H F++
Sbjct: 355 KHKFLE 360

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 58.9 bits (143), Expect = 2e-11
 Identities = 26/138 (18%), Positives = 46/138 (33%), Gaps = 43/138 (31%)

Query: 36  GYGLPADIWSVGCTVLEMLT--------------------------------RCRPYF-- 61
           G+  P D+WS+GC + E                                   R + YF  
Sbjct: 215 GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYK 274

Query: 62  -GVEW--VQALFKIARGELPPIPDSVSRDAR------DFILKCLQVNPNDRPTAAQLMEH 112
            G+ W    +  +  +    P+   + +D+       D + + L+ +P  R T A+ + H
Sbjct: 275 GGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH 334

Query: 113 PFVKRPLPTSWGLPTPHH 130
           PF     P      T  +
Sbjct: 335 PFFAGLTPEERSFHTSRN 352

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 58.4 bits (142), Expect = 2e-11
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 1/83 (1%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA-RGELPPIPDSVSRDAR 89
                     AD+WS    + E++TR  P+  +  ++   K+A  G  P IP  +S    
Sbjct: 182 KKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVS 241

Query: 90  DFILKCLQVNPNDRPTAAQLMEH 112
             +  C+  +P  RP    ++  
Sbjct: 242 KLMKICMNEDPAKRPKFDMIVPI 264

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 58.8 bits (143), Expect = 2e-11
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 8/85 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFILK 94
            YG   D W +G  + EM+   R  F  +  + LF  I   E+   P ++S +A+  +  
Sbjct: 181 DYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHERLFELILMEEIR-FPRTLSPEAKSLLAG 238

Query: 95  CLQVNPNDR----PTAAQ-LMEHPF 114
            L+ +P  R    P+ A+ +MEH F
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRF 263

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 58.6 bits (142), Expect = 3e-11
 Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 10/98 (10%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGEL----PP 79
           L         G YG   D W++G    EM     P++  +     + KI   +     P 
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA-DSTAETYGKIVHYKEHLSLPL 293

Query: 80  IPDSVSRDARDFILKCLQVNPNDR---PTAAQLMEHPF 114
           + + V  +ARDFI + L   P  R     A     HPF
Sbjct: 294 VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPF 330

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 58.6 bits (142), Expect = 3e-11
 Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 8/92 (8%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWVQALFKIARGELPPIPDSVSRDAR 89
               Y    D +++G T+ EM+    P+         + L +    +    PD  S  ++
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASK 421

Query: 90  DFILKCLQVNPNDR-----PTAAQLMEHPFVK 116
           DF    LQ +P  R      +   L  HP  +
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLFR 453

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 58.6 bits (142), Expect = 3e-11
 Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 8/90 (8%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDAR 89
           KN  Y    D W++GC + EM+    P+   +      ++ R          +  S  AR
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQAR 417

Query: 90  DFILKCLQVNPNDR-----PTAAQLMEHPF 114
               + L  +P +R      +A ++ EHP 
Sbjct: 418 SLCSQLLCKDPAERLGCRGGSAREVKEHPL 447

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 57.9 bits (141), Expect = 4e-11
 Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 10/92 (10%)

Query: 29  VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRD 87
           VV++K   Y    D WS G  + EML    P++        + KI   EL   P   + D
Sbjct: 174 VVSTK--PYNKSIDWWSFGILIYEMLAGYTPFYD-SNTMKTYEKILNAEL-RFPPFFNED 229

Query: 88  ARDFILKCLQVNPNDR-----PTAAQLMEHPF 114
            +D + + +  + + R          +  HP+
Sbjct: 230 VKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 57.3 bits (139), Expect = 6e-11
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 8/87 (9%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFI 92
           + GY    D W++G  + EM     P+F  +    ++ KI  G++   P   S D +D +
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKVR-FPSHFSSDLKDLL 269

Query: 93  LKCLQVNPNDR-----PTAAQLMEHPF 114
              LQV+   R          +  H +
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 57.2 bits (139), Expect = 6e-11
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 4/81 (4%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFILK 94
            Y    D WS G  + EML   +  F  +  + LF  I        P  + ++A+D ++K
Sbjct: 194 KYNHSVDWWSFGVLLYEMLI-GQSPFHGQDEEELFHSIRMDNPF-YPRWLEKEAKDLLVK 251

Query: 95  CLQVNPNDRPTAAQ-LMEHPF 114
                P  R      + +HP 
Sbjct: 252 LFVREPEKRLGVRGDIRQHPL 272

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 57.4 bits (139), Expect = 8e-11
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFILK 94
            YG   D W +G  + EM+   R  F  +  + LF  I   E+   P ++  +A+  +  
Sbjct: 325 DYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHEKLFELILMEEIR-FPRTLGPEAKSLLSG 382

Query: 95  CLQVNPNDR----PT-AAQLMEHPF 114
            L+ +P  R       A ++M+H F
Sbjct: 383 LLKKDPKQRLGGGSEDAKEIMQHRF 407

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 56.9 bits (138), Expect = 9e-11
 Identities = 27/126 (21%), Positives = 42/126 (33%), Gaps = 43/126 (34%)

Query: 36  GYGLPADIWSVGCTVLEMLT--------------------------------RCRPYF-- 61
           G+  P D+WS+GC ++E                                   R R YF  
Sbjct: 210 GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHH 269

Query: 62  -GVEWVQ---ALFKIARGELP-----PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
             ++W +   A   ++R   P        D       D I K L+ +P  R T  + ++H
Sbjct: 270 DRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329

Query: 113 PFVKRP 118
           PF    
Sbjct: 330 PFFDLL 335

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 56.6 bits (137), Expect = 1e-10
 Identities = 31/128 (24%), Positives = 45/128 (35%), Gaps = 48/128 (37%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKI-------------------AR- 74
            Y    D+WS+GC + E+L   +P F G   +  L +I                   A+ 
Sbjct: 207 KYTKGIDMWSLGCILGEILCG-KPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKT 265

Query: 75  -----GELPPIPDS---------------------VSRDARDFILKCLQVNPNDRPTAAQ 108
                 E   I  S                      + +A D + K LQ NPN R +A  
Sbjct: 266 MIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISAND 325

Query: 109 LMEHPFVK 116
            ++HPFV 
Sbjct: 326 ALKHPFVS 333

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 56.5 bits (137), Expect = 1e-10
 Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 9/86 (10%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFILK 94
            YG   D W++G  + EML      F  E    LF  I   E+   P  +  DA   +  
Sbjct: 200 LYGPAVDWWAMGVLLYEMLC-GHAPFEAENEDDLFEAILNDEVV-YPTWLHEDATGILKS 257

Query: 95  CLQVNPNDR----PTAA--QLMEHPF 114
            +  NP  R           ++ HPF
Sbjct: 258 FMTKNPTMRLGSLTQGGEHAILRHPF 283

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 56.1 bits (136), Expect = 2e-10
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 8/85 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFILK 94
            YG   D W+ G  + EML   +  F  E    LF  I    +   P S+S++A      
Sbjct: 197 PYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDELFQSIMEHNVA-YPKSMSKEAVAICKG 254

Query: 95  CLQVNPNDR----PTAAQ-LMEHPF 114
            +  +P  R    P   + + EH F
Sbjct: 255 LMTKHPGKRLGCGPEGERDIKEHAF 279

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 55.4 bits (134), Expect = 2e-10
 Identities = 17/78 (21%), Positives = 39/78 (50%), Gaps = 7/78 (8%)

Query: 41  ADIWSVGCTVL-EMLTRCRPYFGVEWV-QALFKIARGELPP----IPDSVSRDARDFILK 94
           +D+++ G  VL E++T   PY  +    Q +  + RG L P    +  +  +  +  + +
Sbjct: 206 SDVYAFG-IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAE 264

Query: 95  CLQVNPNDRPTAAQLMEH 112
           CL+   ++RP+  +++  
Sbjct: 265 CLKKKRDERPSFPRILAE 282

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 55.6 bits (134), Expect = 3e-10
 Identities = 18/110 (16%), Positives = 31/110 (28%), Gaps = 28/110 (25%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYF----GVEWVQALFKIARGELP-------- 78
                 YG   D+WS+G T     T   P+          + ++KI  G+          
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQK 253

Query: 79  ------------PIPDSVSRDARD----FILKCLQVNPNDRPTAAQLMEH 112
                       P+  S+SR  +      +   L+ +        Q    
Sbjct: 254 AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 55.6 bits (134), Expect = 3e-10
 Identities = 29/142 (20%), Positives = 42/142 (29%), Gaps = 49/142 (34%)

Query: 37  YGLPADIWSVGCTVLEMLTRCRPYF----------GVEWVQALFKIAR------------ 74
           Y    DIW++GC   E+LT   P F                 L +I              
Sbjct: 213 YTKAIDIWAIGCIFAELLTS-EPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWED 271

Query: 75  -GELP------------------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQL 109
             ++P                                 A   + K L ++P  R T+ Q 
Sbjct: 272 IKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 331

Query: 110 MEHP-FVKRPLPTSWGLPTPHH 130
           M+ P F++ PLPTS        
Sbjct: 332 MQDPYFLEDPLPTSDVFAGCQI 353

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 54.4 bits (131), Expect = 7e-10
 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 6/93 (6%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE----LPPIPDS 83
           Q +    G YG   D WS+G  + EML    P++    V+   KI   +     P     
Sbjct: 249 QAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTD 308

Query: 84  VSRDARDFILKCLQVNPN--DRPTAAQLMEHPF 114
           VS +A+D I + +    +   +       +HPF
Sbjct: 309 VSENAKDLIRRLICSREHRLGQNGIEDFKKHPF 341

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 54.3 bits (131), Expect = 7e-10
 Identities = 21/148 (14%), Positives = 39/148 (26%), Gaps = 63/148 (42%)

Query: 36  GYGLPADIWSVGCTV---------------LEML------------------TRCRPYFG 62
            Y L  D+WS+GC +               ++ +                   + R +F 
Sbjct: 234 PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFE 293

Query: 63  --------------------VEWVQALFKIARGELPPIPDSVSRDA----------RDFI 92
                                   + L  I   E        + ++          +D I
Sbjct: 294 KLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLI 353

Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKRPLP 120
           L+ L  +P  R      ++H F K+   
Sbjct: 354 LRMLDYDPKTRIQPYYALQHSFFKKTAD 381

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 54.3 bits (130), Expect = 1e-09
 Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 8/85 (9%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFILK 94
            YG   D W+ G  + EML   +  F  E    LF  I    +   P S+S++A      
Sbjct: 518 PYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDELFQSIMEHNVA-YPKSMSKEAVAICKG 575

Query: 95  CLQVNPNDR-----PTAAQLMEHPF 114
            +  +P  R          + EH F
Sbjct: 576 LMTKHPGKRLGCGPEGERDIKEHAF 600

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 54.0 bits (130), Expect = 1e-09
 Identities = 25/144 (17%), Positives = 44/144 (30%), Gaps = 58/144 (40%)

Query: 36  GYGLPADIWSVGCTV---------------LEML------------------TRCRPYFG 62
            YG+P D+WS+GC +                + L                   R + +  
Sbjct: 275 RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334

Query: 63  VEWVQALFKIARGELPPIPDSVSRDAR-------------------------DFILKCLQ 97
            +       +       +  +  R  R                         DF+ +CL+
Sbjct: 335 SKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE 394

Query: 98  VNPNDRPTAAQLMEHPFVKRPLPT 121
            +P  R T  Q + HP+++R LP 
Sbjct: 395 WDPAVRMTPGQALRHPWLRRRLPK 418

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 53.4 bits (128), Expect = 2e-09
 Identities = 29/126 (23%), Positives = 42/126 (33%), Gaps = 47/126 (37%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCR---PYFGVEWVQALFKIAR-----GELPP-------- 79
           GY  PADIWS  C   E+ T      P+ G E+ +    IA      G++P         
Sbjct: 269 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKY 328

Query: 80  -------------------------------IPDSVSRDARDFILKCLQVNPNDRPTAAQ 108
                                               +    DF+L  L++ P  R TAA+
Sbjct: 329 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE 388

Query: 109 LMEHPF 114
            + HP+
Sbjct: 389 CLRHPW 394

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 52.7 bits (127), Expect = 3e-09
 Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEW--------VQALF-KIARGELPPIPDSVSR 86
            YG   D W++G  + EM+    P+  V             LF  I   ++  IP S+S 
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-IPRSLSV 287

Query: 87  DARDFILKCLQVNPNDR------PTAAQLMEHPF 114
            A   +   L  +P +R         A +  HPF
Sbjct: 288 KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 321

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 52.6 bits (127), Expect = 3e-09
 Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 16/94 (17%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEW--------VQALF-KIARGELPPIPDSVSR 86
            YG   D W++G  + EM+    P+  V             LF  I   ++  IP S+S 
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-IPRSLSV 244

Query: 87  DARDFILKCLQVNPNDR------PTAAQLMEHPF 114
            A   +   L  +P +R         A +  HPF
Sbjct: 245 KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 278

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 52.3 bits (126), Expect = 4e-09
 Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 2/81 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA--RGELPPIPDSVSRDARD 90
               Y    D++S G  + E++ R             F +          P +       
Sbjct: 195 NGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFP 254

Query: 91  FILKCLQVNPNDRPTAAQLME 111
             ++C  ++P  RP+  +L  
Sbjct: 255 ITVRCCDLDPEKRPSFVKLEH 275

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 52.0 bits (124), Expect = 6e-09
 Identities = 13/87 (14%), Positives = 22/87 (25%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           +   Y +  D WS G    E +T  RP+             R +                
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVK 255

Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKRPL 119
              +   PN            +++  L
Sbjct: 256 FSSVLPTPNHLSGILAGKLERWLQCML 282

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 51.5 bits (124), Expect = 8e-09
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIP----DSVSRDARDFILKCLQ 97
           DI+S+G  + EML    P+ G   V    K  +  +P +       + +   + IL+  +
Sbjct: 194 DIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATE 253

Query: 98  VNPNDRPTAAQLM 110
            +  +R    Q M
Sbjct: 254 KDKANRYKTIQEM 266

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 51.1 bits (123), Expect = 1e-08
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 11/96 (11%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGE 76
           RW    SL D V  +        +D+WS G  + E+ T    PY G+   Q L  +  G 
Sbjct: 205 RWMSPESLKDGVFTTY-------SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 257

Query: 77  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
           L   PD+      + +  C Q NP  RP+  +++  
Sbjct: 258 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 49.6 bits (119), Expect = 3e-08
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 42  DIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPD---SVSRDARDFILKCLQV 98
           D++S+GC + E+LT   P+ G   V   ++  R +  P       +S D    +LK L  
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAK 260

Query: 99  NPNDRPTAAQLM 110
           NP +R   A  M
Sbjct: 261 NPENRYQTAAEM 272

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 49.8 bits (119), Expect = 4e-08
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + +C +  P
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 422

Query: 101 NDRPTAAQLME 111
            +RPT   L  
Sbjct: 423 EERPTFEYLQA 433

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 49.3 bits (118), Expect = 4e-08
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGE 76
           +W    SL D +           +D+W+ G T+ E++TR   PY G+E  +    +  G 
Sbjct: 204 KWLALESLADNLYTVH-------SDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN 256

Query: 77  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
               P     +  D + +C   +P  RP+   L   
Sbjct: 257 RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRME 292

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 49.4 bits (118), Expect = 4e-08
 Identities = 32/165 (19%), Positives = 42/165 (25%), Gaps = 74/165 (44%)

Query: 25  LTDQVV-----------NSKNGGYGLPADIWSVGCTVLEMLTRC----------RPYF-- 61
           LT  VV             +N  Y    D+WS+GC   E+L              P F  
Sbjct: 240 LTGHVVTRWYRAPELILLQEN--YTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPG 297

Query: 62  -------------------GVEWVQALFKI-------------------AR---GELPPI 80
                                     L  I                   A+      P  
Sbjct: 298 SSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKR 357

Query: 81  P--------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
                     + S DA   + + L  NPN R T  + + HPF K 
Sbjct: 358 EGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 49.0 bits (117), Expect = 5e-08
 Identities = 28/139 (20%), Positives = 37/139 (26%), Gaps = 58/139 (41%)

Query: 37  YGLPADIWSVGCTVLEMLT----------RCRPYF-GVEWVQA----------------- 68
           Y    DIWS GC   E+L              P F G                       
Sbjct: 229 YTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQ 288

Query: 69  LFKI-------------------ARG---ELPPIP--------DSVSRDARDFILKCLQV 98
           L  I                           P            S+S D  + +   L+ 
Sbjct: 289 LNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKF 348

Query: 99  NPNDRPTAAQLMEHPFVKR 117
           NPN R T  Q ++HP++K 
Sbjct: 349 NPNKRITIDQALDHPYLKD 367

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 48.6 bits (116), Expect = 6e-08
 Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 22/93 (23%)

Query: 41  ADIWSVGCTVLEMLTRCRPYFG-VEWVQALFKIARGEL----------------PPIPDS 83
            D++++G  + E+ +RC    G V+     F+   G+                 P + D 
Sbjct: 219 IDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDY 278

Query: 84  VSRDA-----RDFILKCLQVNPNDRPTAAQLME 111
             + A      + I +C   +   R +A  + E
Sbjct: 279 WQKHAGMAMLCETIEECWDHDAEARLSAGCVGE 311

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 48.8 bits (117), Expect = 7e-08
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 42  DIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    + KC  ++ 
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDA 260

Query: 101 NDRPTAAQLMEH 112
           + RP   +L+  
Sbjct: 261 DSRPKFRELIIE 272

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 48.8 bits (116), Expect = 7e-08
 Identities = 13/81 (16%), Positives = 22/81 (27%), Gaps = 5/81 (6%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC 95
            +    D + V  TV  ML         E  +   +     LP +         +F    
Sbjct: 261 PWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDMW-----NEFFHVM 315

Query: 96  LQVNPNDRPTAAQLMEHPFVK 116
           L +       +  L+     K
Sbjct: 316 LNIPDCHHLPSLDLLRQKLKK 336

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 48.3 bits (115), Expect = 9e-08
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  + E+ T+ R PY G+   + L ++ RG   P P        D + +C +  P
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 505

Query: 101 NDRPTAAQLME 111
            +RPT   L  
Sbjct: 506 EERPTFEYLQA 516

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 48.2 bits (115), Expect = 1e-07
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 9/88 (10%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF-KIARGELP---PIPDSVSRDAR 89
           +G YG   D WSVG  + EML    P++  + +   + KI   +     P  + +S++A+
Sbjct: 247 DGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMNHKNSLTFPDDNDISKEAK 305

Query: 90  DFILKCLQVNPNDR---PTAAQLMEHPF 114
           + I      +   R       ++  H F
Sbjct: 306 NLI-CAFLTDREVRLGRNGVEEIKRHLF 332

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 47.9 bits (114), Expect = 1e-07
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 11/95 (11%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGE 76
           +W    S+  +   S        +D+W  G  + E+L    +P+ GV+    + +I  GE
Sbjct: 557 KWMAPESINFRRFTSA-------SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 609

Query: 77  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLME 111
             P+P +        + KC   +P+ RP   +L  
Sbjct: 610 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 47.8 bits (114), Expect = 1e-07
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 23/107 (21%)

Query: 27  DQVVNSKNGGYGLPADIWSVGCTVL-EMLTRCRPYFGVEWVQALFK-------------- 71
           D+ +N  +    + AD++S G  +L E+  RC     VE  Q  +               
Sbjct: 219 DESLNRNHFQSYIMADMYSFGL-ILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMRE 277

Query: 72  --IARGELPPIPDSVSRDA-----RDFILKCLQVNPNDRPTAAQLME 111
               +   P  P+  S D         + +C   NP  R TA ++ +
Sbjct: 278 IVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKK 324

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 17/96 (17%), Positives = 40/96 (41%), Gaps = 11/96 (11%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGE 76
           RW    S+      ++       +D+W+ G  + E+ +    PY+G+   + ++ +  G 
Sbjct: 241 RWMPPESIFYNRYTTE-------SDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGN 293

Query: 77  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
           +   P++   +  + +  C    P DRP+   +   
Sbjct: 294 ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI 329

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 11/96 (11%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGE 76
           +W    SL D+V  SK       +D+W+ G T+ E+ TR   PY GV+  +    +  G 
Sbjct: 214 KWIAIESLADRVYTSK-------SDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH 266

Query: 77  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
               P+    +  + +  C + +P DRPT + L   
Sbjct: 267 RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ 302

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+W  G  + E+L    +P+ GV+    + +I  GE  P+P +        + KC   +P
Sbjct: 199 DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDP 258

Query: 101 NDRPTAAQLME 111
           + RP   +L  
Sbjct: 259 SRRPRFTELKA 269

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 4/73 (5%)

Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPD---SVSRDARDFILKCLQ 97
           ADI+++ C + E LT   PY G + +  +       +P        +       I + + 
Sbjct: 216 ADIYALTCVLYECLTGSPPYQG-DQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMA 274

Query: 98  VNPNDRPTAAQLM 110
            NP DR      +
Sbjct: 275 KNPEDRYVTCGDL 287

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G T+ E L+   +PY  ++  + +  I +G+    P     +    +  C     
Sbjct: 195 DVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKW 254

Query: 101 NDRPTAAQLME 111
            DRP    + +
Sbjct: 255 EDRPDFLTVEQ 265

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G TV E++T    PY G+   +    + +GE    P   + D    ++KC  ++ 
Sbjct: 199 DVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDE 258

Query: 101 NDRPTAAQLMEH 112
           N RPT  +L   
Sbjct: 259 NIRPTFKELANE 270

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 47.0 bits (112), Expect = 2e-07
 Identities = 10/77 (12%), Positives = 22/77 (28%), Gaps = 6/77 (7%)

Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEW---VQALFKIARGELPP---IPDSVSRDARDFILK 94
            DI  +G ++  +L    P         +    +   G+      I   +         +
Sbjct: 183 DDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAAR 242

Query: 95  CLQVNPNDRPTAAQLME 111
            +Q +   R  +  L  
Sbjct: 243 SVQGDGGIRSASTLLNL 259

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 42  DIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G TV E++T   +PY G+   +    + +GE  P P   + D    ++KC  ++ 
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA 260

Query: 101 NDRPTAAQLMEH 112
           + RP   +L+  
Sbjct: 261 DSRPKFRELIIE 272

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  + E+ T  + P++ +   +A+  I +G     P +   +    +  C Q  P
Sbjct: 242 DVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREP 301

Query: 101 NDRPTAAQLMEH 112
             R +   +   
Sbjct: 302 QQRHSIKDVHAR 313

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGE 76
           +W    SL  Q   +K       +D+WS G  + E++TR   PY  V        + +G 
Sbjct: 197 KWMALESLQTQKFTTK-------SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 249

Query: 77  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
               P+       + +LKC       RP+ ++L+  
Sbjct: 250 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 285

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 47.0 bits (112), Expect = 3e-07
 Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 11/96 (11%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGE 76
           +W    +  + +  SK        D WS G  + E+ +    PY      + L  +  G 
Sbjct: 251 KWMPPEAFMEGIFTSK-------TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 303

Query: 77  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
               P +        + +C Q  P DRP  A ++E 
Sbjct: 304 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 339

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 11/96 (11%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGE 76
           +W    +L D+V   +       +D+WS G  + E+ T    PY G+   +    +  G 
Sbjct: 224 KWMAPEALFDRVYTHQ-------SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH 276

Query: 77  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
               P + + +    +  C    P+ RPT  QL+E 
Sbjct: 277 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 19/120 (15%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGE 76
           +W    +  + +  SK        D WS G  + E+ +    PY      + L  +  G 
Sbjct: 210 KWMPPEAFMEGIFTSK-------TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 262

Query: 77  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH--------PFVKRPLPTSWGLPTP 128
               P +        + +C Q  P DRP  A ++E           +   LP  +G    
Sbjct: 263 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVE 322

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 46.7 bits (111), Expect = 4e-07
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+W+ G  + E+ T    PY G++  Q    + +      P+       + +  C Q NP
Sbjct: 401 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 460

Query: 101 NDRPTAAQLMEH 112
           +DRP+ A++ + 
Sbjct: 461 SDRPSFAEIHQA 472

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 46.7 bits (111), Expect = 4e-07
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGE 76
           +W    SL  Q   +K       +D+WS G  + E++TR   PY  V        + +G 
Sbjct: 261 KWMALESLQTQKFTTK-------SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 313

Query: 77  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
               P+       + +LKC       RP+ ++L+  
Sbjct: 314 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 349

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 46.6 bits (111), Expect = 4e-07
 Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 23/104 (22%)

Query: 30  VNSKNGGYGLPADIWSVGCTVL-EMLTRCR----------PYFGVEWVQALFKIAR---- 74
           +           DIW+ G  VL E+  R            P++ V      F+  R    
Sbjct: 193 IQVDCFDSYKRVDIWAFG-LVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVC 251

Query: 75  --GELPPIPDSVSRDA-----RDFILKCLQVNPNDRPTAAQLME 111
              + P IP+    D         + +C   NP+ R TA ++ +
Sbjct: 252 VDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  + E  +   +PY G++  +    + +GE    P    R+  D +  C   + 
Sbjct: 202 DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDV 261

Query: 101 NDRPTAAQLME 111
            +RP  A +  
Sbjct: 262 ENRPGFAAVEL 272

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 8/90 (8%)

Query: 24  SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPD 82
           SL      +K       +D+WS G  + E+LTR   PY  ++       +A+G   P P+
Sbjct: 199 SLQTYRFTTK-------SDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPE 251

Query: 83  SVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
                    + +C + +P  RPT   L+  
Sbjct: 252 YCPDSLYQVMQQCWEADPAVRPTFRVLVGE 281

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 46.5 bits (111), Expect = 5e-07
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  + E  +    PY  +   Q    + +G   P P+         + +C    P
Sbjct: 297 DVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEP 356

Query: 101 NDRPTAAQLME 111
             RP+ + + +
Sbjct: 357 GQRPSFSTIYQ 367

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 46.1 bits (110), Expect = 5e-07
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  + E+ T  + P+F +   + +  I +G +   P    ++  D +L C Q  P
Sbjct: 217 DVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREP 276

Query: 101 NDRPTAAQLME 111
             R    ++ +
Sbjct: 277 QQRLNIKEIYK 287

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 46.0 bits (110), Expect = 6e-07
 Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+W     + E+L+   +P+F +E    +  + +G+  P PD         + +C   +P
Sbjct: 196 DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDP 255

Query: 101 NDRPTAAQLME 111
           +DRP   +L+ 
Sbjct: 256 SDRPRFTELVC 266

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 45.8 bits (109), Expect = 7e-07
 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 11/96 (11%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGE 76
           +W    +L D+V   +       +D+WS G  + E+ T    PY G+   +    +  G 
Sbjct: 270 KWMAPEALFDRVYTHQ-------SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH 322

Query: 77  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
               P + + +    +  C    P+ RPT  QL+E 
Sbjct: 323 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 358

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 46.1 bits (109), Expect = 7e-07
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G T+ E L+   +PY  ++  + +  I +G+    P     +    +  C     
Sbjct: 521 DVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKW 580

Query: 101 NDRPTAAQLME 111
            DRP    + +
Sbjct: 581 EDRPDFLTVEQ 591

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 45.6 bits (108), Expect = 1e-06
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 7/70 (10%)

Query: 41  ADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
            DI++VG T+  +        G  +V  L       +    DS  R     + + +  +P
Sbjct: 257 TDIYTVGRTLAALTLDLPTRNG-RYVDGL--PEDDPVLKTYDSYGR----LLRRAIDPDP 309

Query: 101 NDRPTAAQLM 110
             R T A+ M
Sbjct: 310 RQRFTTAEEM 319

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 11/96 (11%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGE 76
           +W    +L D++   +       +D+WS G  + E+ T    PY GV   +    +  G 
Sbjct: 258 KWMAPEALFDRIYTHQ-------SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 310

Query: 77  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
               P + + +    +  C    P+ RPT  QL+E 
Sbjct: 311 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+W+ G  + E+ T    PY G++  Q    + +      P+       + +  C Q NP
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNP 253

Query: 101 NDRPTAAQLMEH 112
           +DRP+ A++ + 
Sbjct: 254 SDRPSFAEIHQA 265

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 45.0 bits (107), Expect = 1e-06
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  + E+++   RPY+ +     +  +  G   P P          +L C Q + 
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDR 291

Query: 101 NDRPTAAQLME 111
           N+RP   Q++ 
Sbjct: 292 NNRPKFEQIVS 302

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 45.0 bits (107), Expect = 1e-06
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  + E+ +  R PY  +     + ++ +G     PD       D +  C  ++ 
Sbjct: 368 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDA 427

Query: 101 NDRPTAAQLME 111
             RPT  QL E
Sbjct: 428 ATRPTFLQLRE 438

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 44.8 bits (106), Expect = 2e-06
 Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 21/106 (19%)

Query: 27  DQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR----------PYFGVEWVQALFK----- 71
           D  +N K+      ADI+++G    E+  RC           PY+ +       +     
Sbjct: 224 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV 283

Query: 72  -IARGELPPIPDSVSRDA-----RDFILKCLQVNPNDRPTAAQLME 111
              +   P IP+              + +C   N   R TA ++ +
Sbjct: 284 VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 329

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  + E+ +    PY  +     + ++ +G     PD       + +  C  ++ 
Sbjct: 196 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDA 255

Query: 101 NDRPTAAQLMEH 112
             RP+  QL E 
Sbjct: 256 AMRPSFLQLREQ 267

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  + E++T   RPY+ +   + +  I  G   P P          +++C Q   
Sbjct: 232 DVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQER 291

Query: 101 NDRPTAAQLME 111
             RP  A ++ 
Sbjct: 292 ARRPKFADIVS 302

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 11/96 (11%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGE 76
           +W    SL D +  ++       +D+WS G  + E++T    PY G+   +    +  G 
Sbjct: 217 KWMAIESLFDHIYTTQ-------SDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH 269

Query: 77  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
               PD+ S +    +L+C +  P+ RP  A + + 
Sbjct: 270 RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 15/86 (17%)

Query: 42  DIWSVGCTVLEMLTRCR---------------PYFGVEWVQALFKIARGELPPIPDSVSR 86
           D+WS G T+ E+LT C                 +  +   + +  +  G+  P P +   
Sbjct: 211 DVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPD 270

Query: 87  DARDFILKCLQVNPNDRPTAAQLMEH 112
           +    + KC +  P++R +   L+E 
Sbjct: 271 EVYQLMRKCWEFQPSNRTSFQNLIEG 296

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 43.8 bits (104), Expect = 3e-06
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  + E+L    RPY+ +     +  +  G   P P          +L C   + 
Sbjct: 236 DVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDR 295

Query: 101 NDRPTAAQLME 111
             RP  +Q++ 
Sbjct: 296 AQRPRFSQIVS 306

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 43.8 bits (104), Expect = 4e-06
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIAR-GELPPIPDSVSRDARDFILKCLQVN 99
           D W  G T+ EM T  + P+ G+   Q L KI + GE  P P+   +D  + +++C    
Sbjct: 206 DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHK 265

Query: 100 PNDRPTAAQLME 111
           P DRPT   L +
Sbjct: 266 PEDRPTFVALRD 277

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 43.4 bits (103), Expect = 4e-06
 Identities = 15/87 (17%), Positives = 25/87 (28%), Gaps = 16/87 (18%)

Query: 42  DIWSVGCTVLEMLTRCR----------------PYFGVEWVQALFKIARGELPPIPDSVS 85
           D+WS G  + E+ T                       +     +  +      P PD   
Sbjct: 199 DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCP 258

Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEH 112
            +    + +C   N N RP+   L   
Sbjct: 259 DEIYMIMTECWNNNVNQRPSFRDLALR 285

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 43.5 bits (103), Expect = 4e-06
 Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  ++E++T  R PY G+   + +  + RG   P P++   +  + +++C +  P
Sbjct: 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRP 426

Query: 101 NDRPTAAQLME 111
            +RPT   +  
Sbjct: 427 EERPTFEYIQS 437

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 43.0 bits (102), Expect = 6e-06
 Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           DIWS G  + E+ +    PY G      +  I   ++ P PD         +++C    P
Sbjct: 212 DIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFP 271

Query: 101 NDRPTAAQLMEH 112
           + RP    +   
Sbjct: 272 SRRPRFKDIHSR 283

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 43.1 bits (102), Expect = 6e-06
 Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 15/85 (17%)

Query: 42  DIWSVGCTVLEMLTRCR---------------PYFGVEWVQALFKIARGELPPIPDSVSR 86
           D+WS G T+ E+LT C                    +  ++    + RGE  P PD    
Sbjct: 219 DVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPA 278

Query: 87  DARDFILKCLQVNPNDRPTAAQLME 111
           +    +  C +   + RPT   L+ 
Sbjct: 279 EVYHLMKNCWETEASFRPTFENLIP 303

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 43.0 bits (102), Expect = 6e-06
 Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 12/97 (12%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVE-WVQALFKIARG 75
           +W    ++ D+V   +       +D+WS G  + E+ +    PY GV+   +   ++  G
Sbjct: 215 KWMAPETIFDRVYTIQ-------SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 267

Query: 76  ELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
                PD  + +    +L C    P+ RPT ++L+EH
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 43.1 bits (102), Expect = 6e-06
 Identities = 15/86 (17%), Positives = 25/86 (29%), Gaps = 16/86 (18%)

Query: 42  DIWSVGCTVLEMLTRCR----------------PYFGVEWVQALFKIARGELPPIPDSVS 85
           D+WS G  + E+ T                       +     +  +      P PD   
Sbjct: 230 DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCP 289

Query: 86  RDARDFILKCLQVNPNDRPTAAQLME 111
            +    + +C   N N RP+   L  
Sbjct: 290 DEIYMIMTECWNNNVNQRPSFRDLAL 315

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+W+ G  + E+ +    PY      + + K+++G     P   S      +  C    P
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELP 246

Query: 101 NDRPTAAQLME 111
             RPT  QL+ 
Sbjct: 247 EKRPTFQQLLS 257

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 42.6 bits (100), Expect = 9e-06
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 9/91 (9%)

Query: 24  SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFK-IARGELPPIP 81
           ++ D+V   +       +D+WS G  + E+ +    PY GV+  +   + +  G     P
Sbjct: 266 TIFDRVYTIQ-------SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 318

Query: 82  DSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
           D  + +    +L C    P+ RPT ++L+EH
Sbjct: 319 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 42.1 bits (99), Expect = 1e-05
 Identities = 19/112 (16%), Positives = 33/112 (29%), Gaps = 25/112 (22%)

Query: 25  LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRC---RPYFGVEWVQALFK---------- 71
           L   V            D++++G    E+  RC    P   V   Q  F+          
Sbjct: 200 LEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFE 259

Query: 72  ------IARGELPPIPDSVSRDA------RDFILKCLQVNPNDRPTAAQLME 111
                     + P  P++   ++      ++ I  C   +   R TA    E
Sbjct: 260 DMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEE 311

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 12/97 (12%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFK-IARG 75
           +W    S+ + V   +       +D+WS G  + E+ +    PY G+      +K I  G
Sbjct: 212 KWMAPESIFNCVYTFE-------SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 264

Query: 76  ELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
                P+    +  D +  C   +P  RPT  Q+++ 
Sbjct: 265 FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  + E+ +    PY      + +  I+ G     P   S      +  C +  P
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERP 246

Query: 101 NDRPTAAQLME 111
            DRP  ++L+ 
Sbjct: 247 EDRPAFSRLLR 257

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 2e-05
 Identities = 25/137 (18%), Positives = 43/137 (31%), Gaps = 32/137 (23%)

Query: 3   RETVEGLGNALRRKWHVSRW-NSLT--DQVVNSKNGGYGLPADIW---SVGCTVLEMLTR 56
           +  +  +   LRR      + N L     V N+K          W   ++ C +L + TR
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAK---------AWNAFNLSCKIL-LTTR 273

Query: 57  CRPYFGVEWVQALFKIARGELPPIPDSVS---RDARDFILKCLQVNPNDRPTAAQLMEHP 113
              +  V     L       +     S++    + +  +LK L   P D P       +P
Sbjct: 274 ---FKQV--TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT-NP 327

Query: 114 FV-------KRPLPTSW 123
                     R    +W
Sbjct: 328 RRLSIIAESIRDGLATW 344

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 40.7 bits (96), Expect = 4e-05
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           D+WS G  + E++T    PY G+   + +  + RG     PD+   +    +  C +  P
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP 251

Query: 101 NDRPTAAQLMEH 112
            DRPT   L   
Sbjct: 252 EDRPTFDYLRSV 263

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 40.7 bits (96), Expect = 4e-05
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 12/97 (12%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFK-IARG 75
           +W    SL + +   K       +D+WS G  + E+ +    PY G+      +K I  G
Sbjct: 239 KWMAPESLFEGIYTIK-------SDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNG 291

Query: 76  ELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
                P   + +    +  C   +   RP+   L   
Sbjct: 292 FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 328

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 40.3 bits (95), Expect = 5e-05
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQVNP 100
           DIW+ G  + E+ +  + PY      +    IA+G     P   S      +  C     
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKA 262

Query: 101 NDRPTAAQLMEH 112
           ++RPT   L+ +
Sbjct: 263 DERPTFKILLSN 274

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 40.3 bits (95), Expect = 6e-05
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 11/96 (11%)

Query: 21  RW---NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGE 76
           RW    SL   V  +        +D+WS G  + E+++    PY G+   +   K+ +G 
Sbjct: 206 RWMAIESLNYSVYTTN-------SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 258

Query: 77  LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
               P +   +  D + +C +  P +RP+ AQ++  
Sbjct: 259 RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 40.0 bits (94), Expect = 6e-05
 Identities = 16/85 (18%), Positives = 27/85 (31%), Gaps = 15/85 (17%)

Query: 42  DIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELP--------------PIPDSVSR 86
           D+WS G  + E+ T C            +    R                  P P +   
Sbjct: 212 DVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPA 271

Query: 87  DARDFILKCLQVNPNDRPTAAQLME 111
           +  + +  C   +P DRP+ + L  
Sbjct: 272 EVHELMKLCWAPSPQDRPSFSALGP 296

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 39.6 bits (93), Expect = 9e-05
 Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 7/73 (9%)

Query: 42  DIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGE-LP-PIPDSVSRDARDFILKCLQV 98
           D WS G T+ E+ +   +P   ++  + L        LP P    +     + I  C+  
Sbjct: 200 DKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAEL----ANLINNCMDY 255

Query: 99  NPNDRPTAAQLME 111
            P+ RP+   ++ 
Sbjct: 256 EPDHRPSFRAIIR 268

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 38.0 bits (89), Expect = 3e-04
 Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 13/93 (13%)

Query: 24  SLTDQVVNSKNGGYGLPADIWSVGCTVL--EMLTR-CRPYFGVE-WVQALFKIARGELPP 79
           S+ D V   +       +D+WS G  +L  E+ +    PY G+    +    +  G    
Sbjct: 237 SIFDCVYTVQ-------SDVWSYG--ILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMA 287

Query: 80  IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
            P    ++    +  C  + P  RPT  Q+   
Sbjct: 288 QPAFAPKNIYSIMQACWALEPTHRPTFQQICSF 320

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	135
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.95
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.95
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.94
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.94
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.94
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.94
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.92
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.92
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.92
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.91
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.9
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.9
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.9
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.89
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.89
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.88
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.88
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.88
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.88
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.87
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.86
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.86
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.86
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.86
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.86
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.86
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.86
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.86
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.85
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.85
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.85
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.85
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.85
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.85
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.85
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.85
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.85
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.85
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.85
3niz_A	311	Rhodanese family protein; structural genomics, str	99.85
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.85
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.85
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.85
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.85
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.84
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.84
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.84
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.84
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.84
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.84
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.84
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.84
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.84
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.84
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.84
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.84
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.84
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.84
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.84
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.83
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.83
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.83
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.83
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.83
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.83
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.83
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.83
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.83
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.83
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.83
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.83
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.83
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.83
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.83
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.83
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.83
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.83
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.83
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.83
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.83
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.82
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.82
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.82
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.82
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.82
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.82
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.82
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.82
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.82
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.82
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.82
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.82
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.82
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.82
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.82
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.82
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.82
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.82
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.81
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.81
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.81
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.81
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.81
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.81
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.81
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.81
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.81
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.81
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.81
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.81
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.81
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.81
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.81
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.81
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.81
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.81
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.81
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.8
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.8
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.8
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.8
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.8
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.8
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.8
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.8
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.8
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.8
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.8
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.8
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.8
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.8
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.8
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.79
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.79
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.79
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.79
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.79
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.79
3bhy_A	283	Death-associated protein kinase 3; death associate	99.79
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.79
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.79
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.79
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.79
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.79
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.78
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.78
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.77
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.77
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.77
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.77
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.77
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.77
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.77
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.76
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.76
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.76
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.75
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.75
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.75
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.75
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.75
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.75
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.75
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.75
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.75
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.75
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.75
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.75
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.74
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.74
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.74
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.74
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.74
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.74
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.74
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.74
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.74
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.74
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.74
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.74
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.74
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.73
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.73
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.73
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.73
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.73
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.73
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.73
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.72
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.72
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.72
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.72
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.72
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.72
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.71
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.71
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.71
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.71
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.7
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.7
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.7
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.7
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.7
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.7
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.7
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.7
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.7
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.7
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.7
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.69
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.69
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.69
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.69
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.69
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.69
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.68
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.68
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.67
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.67
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.67
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.66
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.66
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.66
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.66
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.65
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.65
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.65
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.64
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.64
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.64
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.63
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.63
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.62
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.62
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.62
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.62
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.62
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.61
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.6
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.6
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.58
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.57
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.57
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.55
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.48
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.43
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.34
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.34
3uqc_A	286	Probable conserved transmembrane protein; structur	99.15
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	96.85
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	94.65
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	91.84

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.95  E-value=7.8e-28  Score=162.13  Aligned_cols=111  Identities=21%  Similarity=0.346  Sum_probs=95.2

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      .+++||+.|||||++.+.  .|+.++|+||+||++|+|++|..||.+.+..+.+..+.+... ..|..+++++.+|+.+|
T Consensus       192 ~~~~GTp~YmAPEvl~~~--~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~p~~~s~~~~dli~~l  268 (311)
T 4aw0_A          192 NSFVGTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY-DFPEKFFPKARDLVEKL  268 (311)
T ss_dssp             CCCCSCGGGCCHHHHHHS--CBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-CCCTTCCHHHHHHHHHH
T ss_pred             cCcccCcccCCHHHHcCC--CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-CCCcccCHHHHHHHHHH
Confidence            457999999999999885  689999999999999999999999999888888888887765 56778999999999999


Q ss_pred             cccCCCCCCCHHH------HhhCcCCCCCCCCCCCCCCcc
Q 032711           96 LQVNPNDRPTAAQ------LMEHPFVKRPLPTSWGLPTPH  129 (135)
Q Consensus        96 l~~~p~~Rps~~~------~l~~~~~~~~~~~~~~~~~~~  129 (135)
                      |..||.+|++++|      +++||||++-.......-.|+
T Consensus       269 L~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~~~~pP  308 (311)
T 4aw0_A          269 LVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP  308 (311)
T ss_dssp             SCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSCCC
T ss_pred             ccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHHhcCCCCC
Confidence            9999999999987      588999998655444333343

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.95  E-value=3e-27  Score=161.31  Aligned_cols=104  Identities=31%  Similarity=0.473  Sum_probs=90.7

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC--CCCcccHHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP--IPDSVSRDARDFIL   93 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~li~   93 (135)
                      .+.+||+.|||||++.+.  .|+.++||||+||++|+|++|..||.+.+..+.+..+.....+.  .+..+++++.+|+.
T Consensus       228 ~~~~GTp~YmAPEvl~~~--~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~  305 (346)
T 4fih_A          228 KSLVGTPYWMAPELISRL--PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD  305 (346)
T ss_dssp             CCCCSCGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHH
T ss_pred             cccccCcCcCCHHHHCCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHH
Confidence            457999999999999875  69999999999999999999999999988888887777654432  33567899999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      +||..||.+|+++.|+++||||+...+.
T Consensus       306 ~~L~~dP~~R~ta~e~l~Hp~~~~~~~p  333 (346)
T 4fih_A          306 RLLVRDPAQRATAAELLKHPFLAKAGPP  333 (346)
T ss_dssp             HHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred             HHcCCChhHCcCHHHHhcCHhhcCCCCC
Confidence            9999999999999999999999986553

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.94  E-value=1.5e-27  Score=163.01  Aligned_cols=101  Identities=25%  Similarity=0.501  Sum_probs=93.4

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ++.+||+.|||||++.+.  .|+.++||||+||++|+|++|+.||.+.+..+.+.++..+..++.+..++.++.+|+.+|
T Consensus       183 ~~~~GT~~YmAPE~l~~~--~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~~~  260 (350)
T 4b9d_A          183 RACIGTPYYLSPEICENK--PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQL  260 (350)
T ss_dssp             HHHHSCCTTCCHHHHTTC--CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHH
T ss_pred             cccCCCccccCHHHHCCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHH
Confidence            456899999999999875  699999999999999999999999999998888889988888778888999999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      |..||.+||++.++++||||...
T Consensus       261 L~~dP~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          261 FKRNPRDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             TCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             ccCChhHCcCHHHHhcCHHhhcC
Confidence            99999999999999999999753

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.94  E-value=2.4e-27  Score=157.62  Aligned_cols=102  Identities=26%  Similarity=0.344  Sum_probs=85.1

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      .+.+||+.|||||++.+. ..++.++||||+||++|+|++|+.||.+.+.......+..+.. ..+..+++++.+++.+|
T Consensus       169 ~~~~GT~~Y~APE~~~~~-~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~  246 (275)
T 3hyh_A          169 KTSCGSPNYAAPEVISGK-LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY-TLPKFLSPGAAGLIKRM  246 (275)
T ss_dssp             ------CTTSCHHHHSSS-SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-CCCTTSCHHHHHHHHHH
T ss_pred             CCeeECcccCChhhhcCC-CCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHH
Confidence            457999999999999875 2346899999999999999999999998888777777776654 56778899999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      |..||.+||+++|+++||||+...
T Consensus       247 L~~dP~~R~s~~eil~hpw~k~~~  270 (275)
T 3hyh_A          247 LIVNPLNRISIHEIMQDDWFKVDL  270 (275)
T ss_dssp             SCSSGGGSCCHHHHHHCHHHHTTC
T ss_pred             ccCChhHCcCHHHHHcCcccccCC
Confidence            999999999999999999998654

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.94  E-value=1.1e-26  Score=156.28  Aligned_cols=101  Identities=25%  Similarity=0.404  Sum_probs=90.6

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      .+.+||+.|||||++.+.  .|+.++|+||+||++|+|++|..||.+.+..+.+..+.+... ..|..+++++.+|+.+|
T Consensus       184 ~~~~GT~~YmAPE~~~~~--~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~  260 (304)
T 3ubd_A          184 YSFCGTVEYMAPEVVNRR--GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL-GMPQFLSPEAQSLLRML  260 (304)
T ss_dssp             CSCCCCGGGCCHHHHHTS--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHH
T ss_pred             cccccCcccCCHHHhccC--CCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCC-CCCCcCCHHHHHHHHHH
Confidence            457999999999999875  699999999999999999999999999988888888877665 56778999999999999


Q ss_pred             cccCCCCCCC-----HHHHhhCcCCCCCC
Q 032711           96 LQVNPNDRPT-----AAQLMEHPFVKRPL  119 (135)
Q Consensus        96 l~~~p~~Rps-----~~~~l~~~~~~~~~  119 (135)
                      |..||.+|++     ++|+++||||++..
T Consensus       261 L~~dP~~R~ta~~~~~~eil~Hp~f~~id  289 (304)
T 3ubd_A          261 FKRNPANRLGAGPDGVEEIKRHSFFSTID  289 (304)
T ss_dssp             TCSSGGGSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             cccCHHHCCCCCcCCHHHHHcCccccCCC
Confidence            9999999998     57999999998743

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.94  E-value=1.7e-26  Score=161.07  Aligned_cols=104  Identities=31%  Similarity=0.474  Sum_probs=91.1

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARDFIL   93 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li~   93 (135)
                      .+.+||+.|||||++.+.  .|+.++||||+||++|+|++|..||.+.+..+.+..+.....+  ..+..++.++.+|+.
T Consensus       305 ~~~~GTp~YmAPEvl~~~--~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~  382 (423)
T 4fie_A          305 KSLVGTPYWMAPELISRL--PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD  382 (423)
T ss_dssp             CCCEECTTTCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHH
T ss_pred             cccccCcCcCCHHHHCCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHH
Confidence            457999999999999875  6999999999999999999999999999888888777765443  334578999999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      +||..||.+|+++.++++||||....+.
T Consensus       383 ~~L~~dP~~R~ta~ell~Hp~~~~~~~p  410 (423)
T 4fie_A          383 RLLVRDPAQRATAAELLKHPFLAKAGPP  410 (423)
T ss_dssp             HHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred             HHcCCChhHCcCHHHHhcCHHhcCCCCC
Confidence            9999999999999999999999986543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.94  E-value=1.6e-26  Score=154.68  Aligned_cols=110  Identities=20%  Similarity=0.360  Sum_probs=86.7

Q ss_pred             hhhhhhhhhh-----hhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHH-HHHHHHcCCCC
Q 032711            5 TVEGLGNALR-----RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQ-ALFKIARGELP   78 (135)
Q Consensus         5 ~~~~~~~~~~-----~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~-~~~~i~~~~~~   78 (135)
                      ++.|||.+..     ..+.+||+.|||||++.+   .|+.++||||+||++|+|++|+.||.+.+... ....+..+..+
T Consensus       172 Kl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~---~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~  248 (290)
T 3fpq_A          172 KIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE---KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP  248 (290)
T ss_dssp             EECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT---CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC
T ss_pred             EEEeCcCCEeCCCCccCCcccCccccCHHHcCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC
Confidence            3566665532     245789999999999864   59999999999999999999999997755444 44444444332


Q ss_pred             -CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           79 -PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        79 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                       ..+...++++.+|+.+||..||.+||++.++++||||+.
T Consensus       249 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          249 ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence             234556789999999999999999999999999999975

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.92  E-value=4e-25  Score=153.69  Aligned_cols=104  Identities=27%  Similarity=0.367  Sum_probs=85.7

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC----------------
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP----------------   79 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~----------------   79 (135)
                      .+.+||+.|+|||++.+. ..|+.++||||+||++|+|++|+.||.+.+..+.+..|......+                
T Consensus       220 ~~~~GT~~Y~APEv~~~~-~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~  298 (398)
T 4b99_A          220 TEYVATRWYRAPELMLSL-HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAY  298 (398)
T ss_dssp             CSSCCCCTTCCHHHHTTC-SCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHH
T ss_pred             ccceeChHhcCHHHhcCC-CCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhh
Confidence            357999999999999875 357999999999999999999999999988877776664321100                


Q ss_pred             --------------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           80 --------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        80 --------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                                    .....+.++.+|+.+||..||.+|+++.++++||||+....
T Consensus       299 ~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  353 (398)
T 4b99_A          299 IQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD  353 (398)
T ss_dssp             HHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCC
T ss_pred             hhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCC
Confidence                          01235788999999999999999999999999999997544

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.92  E-value=3.1e-25  Score=150.99  Aligned_cols=101  Identities=27%  Similarity=0.384  Sum_probs=85.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li~~   94 (135)
                      +++||+.|||||++.+.  .|+.++||||+||++|+|++|..||.+.+......++.....+  ..+..+++.+.+++.+
T Consensus       215 ~~~GT~~YmAPE~~~~~--~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~  292 (336)
T 4g3f_A          215 YIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQE  292 (336)
T ss_dssp             CCCCCGGGCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHH
T ss_pred             ccccCccccCHHHHCCC--CCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHH
Confidence            46899999999999875  6999999999999999999999999887665566666665442  3567889999999999


Q ss_pred             hcccCCCCCCCHHHH-------------hhCcCCCCCC
Q 032711           95 CLQVNPNDRPTAAQL-------------MEHPFVKRPL  119 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~-------------l~~~~~~~~~  119 (135)
                      ||..||.+||++.|+             ++|||+....
T Consensus       293 ~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~  330 (336)
T 4g3f_A          293 GLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYK  330 (336)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCC
T ss_pred             HccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCC
Confidence            999999999999987             4689987643

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.92  E-value=1.9e-24  Score=148.74  Aligned_cols=101  Identities=26%  Similarity=0.320  Sum_probs=77.7

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHHHcC-------------------
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIARG-------------------   75 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~-~~~~~~~~i~~~-------------------   75 (135)
                      .+.+||+.|+|||++.+. ..|+.++|+||+||++|+|++|+.||... +..+.+..|...                   
T Consensus       204 ~~~~GT~~Y~APE~l~~~-~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~  282 (361)
T 4f9c_A          204 APRAGTPGFRAPEVLTKC-PNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILC  282 (361)
T ss_dssp             --CCCCGGGCCHHHHTTC-SCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEE
T ss_pred             cccccCccccCHHHHcCC-CCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccc
Confidence            456899999999999874 36899999999999999999999999643 334443333210                   


Q ss_pred             --C--------------------------------CCCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           76 --E--------------------------------LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        76 --~--------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                        .                                .......+++++.+|+.+||..||.+|++++|+++||||+.
T Consensus       283 ~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          283 SKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD  358 (361)
T ss_dssp             SSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred             cccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence              0                                00112356789999999999999999999999999999986

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.91  E-value=3.5e-24  Score=144.60  Aligned_cols=94  Identities=18%  Similarity=0.370  Sum_probs=85.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      +.+||+.|||||++...  .|+.++||||+|+++||+++ |..||.+.+..+....+..+...+.|..++..+.+++.+|
T Consensus       206 ~~~gt~~ymAPE~l~~~--~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C  283 (308)
T 4gt4_A          206 NSLLPIRWMAPEAIMYG--KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIEC  283 (308)
T ss_dssp             SSCBCGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccccCCcccCHHHHhCC--CCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHH
Confidence            46899999999999875  79999999999999999998 8999999988888888888777778889999999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032711           96 LQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~  112 (135)
                      |+.||.+||++.+++.+
T Consensus       284 ~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          284 WNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cCCChhHCcCHHHHHHH
Confidence            99999999999998763

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.90  E-value=4.4e-24  Score=154.37  Aligned_cols=105  Identities=27%  Similarity=0.371  Sum_probs=91.1

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC---CCCCcccHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP---PIPDSVSRDARDFI   92 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~li   92 (135)
                      .+.+||+.|||||++.+.  .|+.++||||+||++|+|++|..||.+.+..+.+..+......   ..+..++.++.+|+
T Consensus       314 ~~~~GT~~y~APEv~~~~--~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli  391 (573)
T 3uto_A          314 KVTTGTAEFAAPEVAEGK--PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI  391 (573)
T ss_dssp             EEECSSGGGCCHHHHTTC--CBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHH
T ss_pred             eeeEECccccCHHHhCCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHH
Confidence            346899999999999875  6899999999999999999999999999988888888776542   22356789999999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                      .+||..||.+|+++.++++||||+......
T Consensus       392 ~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~~  421 (573)
T 3uto_A          392 RKLLLADPNTRMTIHQALEHPWLTPGNAPG  421 (573)
T ss_dssp             HTTSCSSGGGSCCHHHHHHSTTTSCCCCTT
T ss_pred             HHHccCChhHCcCHHHHhcCcCcCCCCCCC
Confidence            999999999999999999999999755443

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.90  E-value=8.7e-24  Score=143.79  Aligned_cols=94  Identities=16%  Similarity=0.333  Sum_probs=84.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ..+||+.|||||++.+.  .|+.++||||+|+++|||++ |+.||.+.+..+.+..+..+...+.|..+++++.+++.+|
T Consensus       219 ~~~gt~~ymAPE~~~~~--~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c  296 (329)
T 4aoj_A          219 RTMLPIRWMPPESILYR--KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGC  296 (329)
T ss_dssp             -CCCCGGGCCHHHHTTC--CCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHH
T ss_pred             cccccccccChhhhcCC--CCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHH
Confidence            46899999999999875  79999999999999999998 8999999888888888888777778888999999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032711           96 LQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~  112 (135)
                      |+.||.+||++.+++.+
T Consensus       297 l~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          297 WQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             CCSSTTTSCCHHHHHHH
T ss_pred             cCcChhHCcCHHHHHHH
Confidence            99999999999998753

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.90  E-value=9.2e-24  Score=142.00  Aligned_cols=91  Identities=16%  Similarity=0.390  Sum_probs=83.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      .+||+.|||||++...  .|+.++||||+|+++|||++ |+.||.+.+..+....+..+..++.|..++.++.+++.+||
T Consensus       190 ~~gt~~ymAPE~~~~~--~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl  267 (299)
T 4asz_A          190 TMLPIRWMPPESIMYR--KFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCW  267 (299)
T ss_dssp             EEECGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             eecChhhcCHHHHcCC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHc
Confidence            4689999999999875  79999999999999999998 89999999888888888888777788889999999999999


Q ss_pred             ccCCCCCCCHHHHh
Q 032711           97 QVNPNDRPTAAQLM  110 (135)
Q Consensus        97 ~~~p~~Rps~~~~l  110 (135)
                      +.||.+||++.++.
T Consensus       268 ~~dP~~RPs~~~i~  281 (299)
T 4asz_A          268 QREPHMRKNIKGIH  281 (299)
T ss_dssp             CSSGGGSCCHHHHH
T ss_pred             CCChhHCcCHHHHH
Confidence            99999999999884

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.89  E-value=9.3e-24  Score=144.78  Aligned_cols=94  Identities=23%  Similarity=0.444  Sum_probs=80.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHH-HHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWV-QALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      +.+||+.|||||++.+.  .|+.++||||+||++|||++ |..||.+.+.. .....+..+..+..|..+++++.+++.+
T Consensus       246 ~~~gt~~ymAPE~l~~~--~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~  323 (353)
T 4ase_A          246 DARLPLKWMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD  323 (353)
T ss_dssp             TEEECGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHH
T ss_pred             cccccccccCHHHHhcC--CCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHH
Confidence            45789999999999875  79999999999999999998 89999876543 3344555666667788899999999999


Q ss_pred             hcccCCCCCCCHHHHhhC
Q 032711           95 CLQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~  112 (135)
                      ||+.||.+||++.++++|
T Consensus       324 c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          324 CWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HcCcChhHCcCHHHHHHH
Confidence            999999999999999876

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.89  E-value=9.8e-24  Score=141.90  Aligned_cols=98  Identities=19%  Similarity=0.312  Sum_probs=75.2

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ++.+||+.|||||++.+.  .|+.++||||+||++|||++   ||.+... ...+..+.....++......+...+|+.+
T Consensus       188 ~~~~GT~~YmAPE~~~~~--~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~  262 (299)
T 4g31_A          188 TGQVGTKLYMSPEQIHGN--SYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQD  262 (299)
T ss_dssp             ----CCCTTSCHHHHTTC--CCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHH
T ss_pred             CCcccCccccCHHHHcCC--CCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHH
Confidence            346899999999999875  69999999999999999995   7765432 23344445444433334456778899999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      ||..||.+||++.++++|+||...
T Consensus       263 ~L~~dP~~Rps~~eil~h~~~~~~  286 (299)
T 4g31_A          263 MLSPSPMERPEAINIIENAVFEDL  286 (299)
T ss_dssp             HTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred             HcCCChhHCcCHHHHhcCHhhCCC
Confidence            999999999999999999999864

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.88  E-value=1.1e-22  Score=137.17  Aligned_cols=95  Identities=16%  Similarity=0.351  Sum_probs=74.9

Q ss_pred             hcccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHH-HHcCCC----CCCCCcccHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFK-IARGEL----PPIPDSVSRDAR   89 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~-i~~~~~----~~~~~~~~~~~~   89 (135)
                      .+.+||+.|||||++... ...|+.++||||+||++|||++|+.||.+.+....+.. +..+..    ...+..++..+.
T Consensus       192 ~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~  271 (307)
T 3omv_A          192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMK  271 (307)
T ss_dssp             --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHH
T ss_pred             cccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHH
Confidence            456899999999999753 23589999999999999999999999987665444433 333322    234567889999


Q ss_pred             HHHHHhcccCCCCCCCHHHHh
Q 032711           90 DFILKCLQVNPNDRPTAAQLM  110 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps~~~~l  110 (135)
                      +++.+||+.+|.+||++.+++
T Consensus       272 ~li~~cl~~dP~~RPs~~ei~  292 (307)
T 3omv_A          272 RLVADCVKKVKEERPLFPQIL  292 (307)
T ss_dssp             HHHHHHTCSSSTTSCCHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHH
Confidence            999999999999999999774

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.88  E-value=1e-22  Score=148.47  Aligned_cols=101  Identities=23%  Similarity=0.325  Sum_probs=83.9

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc---HHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WVQALFKIARGELPPIPDSVSRDARDFI   92 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~li   92 (135)
                      .+.+||+.|||||++... ..|+.++|+||+||++|+|++|..||.+.+   .......+..... ..|..+++++.+|+
T Consensus       348 ~t~~GTp~YmAPEvl~~~-~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~-~~p~~~S~~a~dLI  425 (689)
T 3v5w_A          348 HASVGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-ELPDSFSPELRSLL  425 (689)
T ss_dssp             CSCCSCGGGCCHHHHSTT-CCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCC-CCCTTSCHHHHHHH
T ss_pred             CCccCCcCccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC-CCCccCCHHHHHHH
Confidence            457999999999999753 368999999999999999999999997543   2333444444443 56788999999999


Q ss_pred             HHhcccCCCCCCC-----HHHHhhCcCCCCC
Q 032711           93 LKCLQVNPNDRPT-----AAQLMEHPFVKRP  118 (135)
Q Consensus        93 ~~~l~~~p~~Rps-----~~~~l~~~~~~~~  118 (135)
                      .+||..||.+|++     +++++.||||++.
T Consensus       426 ~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          426 EGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  456 (689)
T ss_dssp             HHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred             HHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence            9999999999998     7999999999974

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.88  E-value=8.4e-22  Score=134.01  Aligned_cols=103  Identities=20%  Similarity=0.334  Sum_probs=89.4

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...+||+.|+|||++.+. ...+.++||||+|+++++|++|..||.+.+.......+..+.. ..|..++.++.+++.+|
T Consensus       171 ~~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~  248 (328)
T 3fe3_A          171 DAFCGAPPYAAPELFQGK-KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKRF  248 (328)
T ss_dssp             GTTSSSGGGCCHHHHHTC-CCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHH
T ss_pred             ccccCCcceeCcccccCC-CcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHH
Confidence            456899999999999875 2335889999999999999999999999888777777776655 56677899999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      |..||.+||+++++++||||+....
T Consensus       249 L~~dP~~R~t~~eil~h~~~~~~~~  273 (328)
T 3fe3_A          249 LVLNPIKRGTLEQIMKDRWINAGHE  273 (328)
T ss_dssp             CCSSTTTSCCHHHHTTCTTTTTTCT
T ss_pred             CCCChhHCcCHHHHhcCHhhcCCCc
Confidence            9999999999999999999987543

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.87  E-value=5.9e-22  Score=137.22  Aligned_cols=104  Identities=26%  Similarity=0.303  Sum_probs=82.8

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC----------------
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP----------------   79 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~----------------   79 (135)
                      ...+||+.|+|||++.+. ..++.++||||+||++++|++|+.||.+.+....+..+......+                
T Consensus       188 ~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~  266 (388)
T 3oz6_A          188 TDYVATRWYRAPEILLGS-TKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTM  266 (388)
T ss_dssp             --CCCGGGGCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHH
T ss_pred             cCCcccCCcCCHHHhcCC-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHH
Confidence            346899999999999864 368999999999999999999999999887766665543211000                


Q ss_pred             ------------------------------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           80 ------------------------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        80 ------------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                                                    .+...+.++.+|+.+||..||.+||+++++++||||+....
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~  337 (388)
T 3oz6_A          267 IESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHN  337 (388)
T ss_dssp             HHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCC
T ss_pred             HHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcC
Confidence                                          11256788999999999999999999999999999986444

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.86  E-value=2e-21  Score=132.60  Aligned_cols=100  Identities=24%  Similarity=0.438  Sum_probs=87.8

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      .+.+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+.......+..... ..+..++.++.+++.+|
T Consensus       163 ~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~l  239 (337)
T 1o6l_A          163 KTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKSLLAGL  239 (337)
T ss_dssp             CCCEECGGGCCGGGGSSS--CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHH
T ss_pred             cccccChhhCChhhhcCC--CCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHH
Confidence            456899999999999874  689999999999999999999999998887777777666544 56677899999999999


Q ss_pred             cccCCCCCC-----CHHHHhhCcCCCCC
Q 032711           96 LQVNPNDRP-----TAAQLMEHPFVKRP  118 (135)
Q Consensus        96 l~~~p~~Rp-----s~~~~l~~~~~~~~  118 (135)
                      |..||.+|+     ++.++++|+||...
T Consensus       240 L~~dP~~R~g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          240 LKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             TCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             hhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence            999999999     89999999999863

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.86  E-value=6.5e-22  Score=135.78  Aligned_cols=101  Identities=21%  Similarity=0.337  Sum_probs=86.9

Q ss_pred             hhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ..+.+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+..+....+..... ..+..++..+.+++.+
T Consensus       181 ~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~li~~  257 (353)
T 3txo_A          181 TATFCGTPDYIAPEILQEM--LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV-VYPTWLHEDATGILKS  257 (353)
T ss_dssp             -----CCGGGCCHHHHHHH--HCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHH
T ss_pred             ccccCCCcCeEChhhcCCC--CcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHH
Confidence            3457899999999999875  689999999999999999999999999888888888877655 5567789999999999


Q ss_pred             hcccCCCCCCCH------HHHhhCcCCCCC
Q 032711           95 CLQVNPNDRPTA------AQLMEHPFVKRP  118 (135)
Q Consensus        95 ~l~~~p~~Rps~------~~~l~~~~~~~~  118 (135)
                      ||..+|.+|+++      +++++||||+..
T Consensus       258 lL~~dP~~R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          258 FMTKNPTMRLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             HTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred             HhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence            999999999998      899999999863

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.86  E-value=3.1e-21  Score=132.80  Aligned_cols=101  Identities=26%  Similarity=0.354  Sum_probs=87.1

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC---CCcccHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI---PDSVSRDARDFI   92 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~li   92 (135)
                      ...+||+.|+|||++...  .++.++|+||+|+++|+|++|..||.+.+..+.+..+........   +..++..+.+|+
T Consensus       176 ~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  253 (361)
T 2yab_A          176 KNIFGTPEFVAPEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFI  253 (361)
T ss_dssp             CCCCSCGGGCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHH
T ss_pred             ccCCCCccEECchHHcCC--CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHH
Confidence            346899999999999874  689999999999999999999999999888887777776654211   245788999999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      .+||..||.+||++.++++||||...
T Consensus       254 ~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          254 RKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             HHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             HHHCCCChhHCcCHHHHhcCcCcCCC
Confidence            99999999999999999999999853

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.86  E-value=1.8e-21  Score=130.57  Aligned_cols=103  Identities=32%  Similarity=0.531  Sum_probs=86.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--CCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--PPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~li~~   94 (135)
                      ..+||+.|+|||++.+.  .++.++||||+|+++|+|++|..||.+.+.......+.....  ...+..++..+.+++.+
T Consensus       175 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  252 (297)
T 3fxz_A          175 TMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR  252 (297)
T ss_dssp             CCCSCGGGCCHHHHHCS--CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHH
T ss_pred             CccCCcCccChhhhcCC--CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHH
Confidence            45899999999999875  689999999999999999999999988877666555443322  23456788999999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      ||..||.+||++.++++|+||+...+.
T Consensus       253 ~l~~dp~~Rps~~ell~h~~~~~~~~~  279 (297)
T 3fxz_A          253 CLEMDVEKRGSAKELLQHQFLKIAKPL  279 (297)
T ss_dssp             HSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred             HccCChhHCcCHHHHhhChhhcccCcc
Confidence            999999999999999999999986553

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.86  E-value=2.2e-21  Score=131.55  Aligned_cols=114  Identities=24%  Similarity=0.295  Sum_probs=88.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC---CCCC--------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG---ELPP--------------   79 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~---~~~~--------------   79 (135)
                      ..+||+.|+|||++.+. ..++.++|+||+|+++++|++|..||.+.+..+....+...   ....              
T Consensus       159 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  237 (324)
T 3mtl_A          159 NEVVTLWYRPPDILLGS-TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY  237 (324)
T ss_dssp             ----CGGGCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred             cccCcccccChhhhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence            35789999999999764 36899999999999999999999999988776655544321   1000              


Q ss_pred             ------------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCCCCcccc
Q 032711           80 ------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHF  131 (135)
Q Consensus        80 ------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~~~~~~~  131 (135)
                                  ....++.++.+|+.+||..||.+||+++++++||||..........+.+..+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~~~~~  301 (324)
T 3mtl_A          238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDTTSI  301 (324)
T ss_dssp             CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTTSSSCTTSCG
T ss_pred             ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccccccCCCCCcH
Confidence                        0123577889999999999999999999999999999988877777776543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.86  E-value=4.1e-21  Score=130.12  Aligned_cols=99  Identities=23%  Similarity=0.420  Sum_probs=88.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      +.+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+.......+..... ..+..++.++.+++.+||
T Consensus       162 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~li~~lL  238 (318)
T 1fot_A          162 TLCGTPDYIAPEVVSTK--PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL-RFPPFFNEDVKDLLSRLI  238 (318)
T ss_dssp             CCCSCTTTCCHHHHTTC--CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHT
T ss_pred             cccCCccccCHhHhcCC--CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHh
Confidence            56899999999999874  689999999999999999999999998888777777776654 556778999999999999


Q ss_pred             ccCCCCCC-----CHHHHhhCcCCCCC
Q 032711           97 QVNPNDRP-----TAAQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rp-----s~~~~l~~~~~~~~  118 (135)
                      ..+|.+|+     ++++++.||||+..
T Consensus       239 ~~dp~~R~~~~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          239 TRDLSQRLGNLQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             CSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             ccCHHHcCCCcCCCHHHHhcCccccCC
Confidence            99999999     89999999999863

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.86  E-value=3.5e-21  Score=131.14  Aligned_cols=108  Identities=22%  Similarity=0.323  Sum_probs=88.0

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC---CCcccHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI---PDSVSRDARDFI   92 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~li   92 (135)
                      ....||+.|+|||++......++.++||||+|+++++|++|..||.+.+..+....+........   ...++..+.+++
T Consensus       232 ~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  311 (345)
T 3hko_A          232 TTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLL  311 (345)
T ss_dssp             ---CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHH
T ss_pred             cccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHH
Confidence            35679999999999976434689999999999999999999999998888777766665544221   124688999999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcCCCCCCCCCC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPFVKRPLPTSW  123 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~  123 (135)
                      .+||..+|.+||++.++++||||+.......
T Consensus       312 ~~~l~~~p~~Rps~~~~l~hp~~~~~~~~~~  342 (345)
T 3hko_A          312 SNLLNRNVDERFDAMRALQHPWISQFSDKIY  342 (345)
T ss_dssp             HHHSCSCTTTSCCHHHHHHSHHHHTTSSCSS
T ss_pred             HHHcCCChhHCCCHHHHhcChhhccChHhhE
Confidence            9999999999999999999999998665443

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.86  E-value=3.5e-21  Score=132.14  Aligned_cols=99  Identities=21%  Similarity=0.372  Sum_probs=87.8

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+..+....+..... ..+..++.++.+++.+|
T Consensus       179 ~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~l  255 (353)
T 2i0e_A          179 KTFCGTPDYIAPEIIAYQ--PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV-AYPKSMSKEAVAICKGL  255 (353)
T ss_dssp             CCCCSCGGGCCHHHHTTC--CBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHH
T ss_pred             ccccCCccccChhhhcCC--CcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHH
Confidence            457899999999999874  689999999999999999999999999888877777776654 56678899999999999


Q ss_pred             cccCCCCCCC-----HHHHhhCcCCCC
Q 032711           96 LQVNPNDRPT-----AAQLMEHPFVKR  117 (135)
Q Consensus        96 l~~~p~~Rps-----~~~~l~~~~~~~  117 (135)
                      |..+|.+|++     +++++.|+||+.
T Consensus       256 L~~dP~~R~~~~~~~~~~i~~h~~f~~  282 (353)
T 2i0e_A          256 MTKHPGKRLGCGPEGERDIKEHAFFRY  282 (353)
T ss_dssp             TCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred             hhcCHHHcCCCCCCCHHHHhcCccccC
Confidence            9999999995     689999999985

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.85  E-value=4.8e-21  Score=134.96  Aligned_cols=99  Identities=28%  Similarity=0.527  Sum_probs=86.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC---CCCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP---PIPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++...  .++.++||||+|+++|+|++|..||.+.+.......+..+...   +....++.++.+++.
T Consensus       172 ~~~gt~~Y~APE~l~~~--~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  249 (444)
T 3soa_A          172 GFAGTPGYLSPEVLRKD--PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN  249 (444)
T ss_dssp             CSCSCGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHH
T ss_pred             cccCCcccCCHHHhcCC--CCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHH
Confidence            45899999999999774  6899999999999999999999999998888877777766542   222467899999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      +||..||.+||++.++++||||..
T Consensus       250 ~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          250 KMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             HHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             HHcCCChhHCCCHHHHhcCccccC
Confidence            999999999999999999999974

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.85  E-value=1.6e-21  Score=133.52  Aligned_cols=100  Identities=19%  Similarity=0.375  Sum_probs=88.6

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+.......+..... ..+..++.++.+++.+|
T Consensus       176 ~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~l  252 (345)
T 1xjd_A          176 NTFCGTPDYIAPEILLGQ--KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP-FYPRWLEKEAKDLLVKL  252 (345)
T ss_dssp             CCCCSCGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHH
T ss_pred             cCCCCCcccCChhhhcCC--CCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCC-CCCcccCHHHHHHHHHH
Confidence            456899999999999875  689999999999999999999999998888777777766554 45677899999999999


Q ss_pred             cccCCCCCCCHH-HHhhCcCCCCC
Q 032711           96 LQVNPNDRPTAA-QLMEHPFVKRP  118 (135)
Q Consensus        96 l~~~p~~Rps~~-~~l~~~~~~~~  118 (135)
                      |..+|.+|+++. ++++||||+..
T Consensus       253 L~~dp~~R~~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          253 FVREPEKRLGVRGDIRQHPLFREI  276 (345)
T ss_dssp             SCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             hcCCHhHcCCChHHHHcCccccCC
Confidence            999999999998 99999999864

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.85  E-value=5.4e-21  Score=134.62  Aligned_cols=100  Identities=22%  Similarity=0.429  Sum_probs=88.5

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...+||+.|+|||++.+.  .++.++||||+|+++++|++|..||.+.+.......+..... ..+..+++++.+++.+|
T Consensus       307 ~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~li~~~  383 (446)
T 4ejn_A          307 KTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAKSLLSGL  383 (446)
T ss_dssp             CCSSSCGGGCCHHHHHTS--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHH
T ss_pred             ccccCCccccCHhhcCCC--CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCC-CCCccCCHHHHHHHHHH
Confidence            456899999999999874  689999999999999999999999998887777776665554 46677899999999999


Q ss_pred             cccCCCCCC-----CHHHHhhCcCCCCC
Q 032711           96 LQVNPNDRP-----TAAQLMEHPFVKRP  118 (135)
Q Consensus        96 l~~~p~~Rp-----s~~~~l~~~~~~~~  118 (135)
                      |..||.+|+     ++.++++||||...
T Consensus       384 L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          384 LKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             TCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             cccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            999999999     99999999999864

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.85  E-value=3.1e-21  Score=131.02  Aligned_cols=102  Identities=23%  Similarity=0.349  Sum_probs=79.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC----------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI----------------   80 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~----------------   80 (135)
                      ..+||..|+|||++.+. ..++.++||||+|++++++++|..||.+....+.+..+......+.                
T Consensus       196 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (329)
T 3gbz_A          196 HEIITLWYRPPEILLGS-RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQS  274 (329)
T ss_dssp             ----CCTTCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred             CCcCCccccCHHHhcCC-CCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhh
Confidence            35789999999999864 3589999999999999999999999998887666655432110000                


Q ss_pred             -------------CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           81 -------------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        81 -------------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                                   +..++.++.+|+.+||..||.+||++.++++||||+...
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  326 (329)
T 3gbz_A          275 FPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND  326 (329)
T ss_dssp             CCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSC
T ss_pred             hhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCC
Confidence                         011568899999999999999999999999999999754

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.85  E-value=7.8e-21  Score=128.97  Aligned_cols=106  Identities=24%  Similarity=0.331  Sum_probs=87.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC---CCCCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++...  .++.++|+|++|+++++|++|..||.+.+.......+.....   ......++..+.+++.
T Consensus       192 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  269 (327)
T 3lm5_A          192 EIMGTPEYLAPEILNYD--PITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQ  269 (327)
T ss_dssp             --CCCGGGCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHH
T ss_pred             cccCCcCccCCeeecCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHH
Confidence            45799999999999764  689999999999999999999999998887776666554433   2233567899999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPLPTSWG  124 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~  124 (135)
                      +||..+|.+||++.++++|+||+........
T Consensus       270 ~~L~~dP~~Rpt~~~ll~h~~~~~~~~~~~~  300 (327)
T 3lm5_A          270 SLLVKNPEKRPTAEICLSHSWLQQWDFENLF  300 (327)
T ss_dssp             HHSCSSGGGSCCHHHHTTCGGGCCCCTTCC-
T ss_pred             HHcCCChhhCcCHHHHhCCHhhccccccccc
Confidence            9999999999999999999999876554443

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.85  E-value=6.1e-21  Score=130.80  Aligned_cols=98  Identities=26%  Similarity=0.441  Sum_probs=88.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      +.+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+.......+..+.. ..+..++..+.+++.+||
T Consensus       197 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~li~~lL  273 (350)
T 1rdq_E          197 TLCGTPEALAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLL  273 (350)
T ss_dssp             CCEECGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTCCHHHHHHHHHHS
T ss_pred             cccCCccccCHHHhcCC--CCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHh
Confidence            46899999999999875  689999999999999999999999999888877777777654 566778999999999999


Q ss_pred             ccCCCCCCC-----HHHHhhCcCCCC
Q 032711           97 QVNPNDRPT-----AAQLMEHPFVKR  117 (135)
Q Consensus        97 ~~~p~~Rps-----~~~~l~~~~~~~  117 (135)
                      ..||.+|++     +++++.|+||..
T Consensus       274 ~~dp~~R~~~~~~~~~ei~~h~~f~~  299 (350)
T 1rdq_E          274 QVDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             CSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             hcCHHhccCCccCCHHHHHhCcCcCC
Confidence            999999998     999999999986

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.85  E-value=5e-21  Score=128.72  Aligned_cols=101  Identities=25%  Similarity=0.373  Sum_probs=80.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--C--C-------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--P--P-------------   79 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--~--~-------------   79 (135)
                      ..+||+.|+|||++.+.  .++.++||||+|+++++|++|..||.+.+.......+.....  .  .             
T Consensus       178 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  255 (308)
T 3g33_A          178 PVVVTLWYRAPEVLLQS--TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFP  255 (308)
T ss_dssp             GGGCCCSSCCHHHHHTS--CCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSC
T ss_pred             CccccccccCchHHcCC--CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccC
Confidence            45889999999999875  689999999999999999999999998887766655432110  0  0             


Q ss_pred             ---------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           80 ---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        80 ---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                               ....++..+.+++.+||..||.+||++.++++|+||....
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          256 PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             CCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred             CCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence                     0124678899999999999999999999999999998753

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.85  E-value=2.7e-21  Score=134.53  Aligned_cols=101  Identities=23%  Similarity=0.382  Sum_probs=82.1

Q ss_pred             hhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc---------HHHHHHHHHcCCCCCCCCccc
Q 032711           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---------WVQALFKIARGELPPIPDSVS   85 (135)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~---------~~~~~~~i~~~~~~~~~~~~~   85 (135)
                      ..+.+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||....         .......+.... ...|..++
T Consensus       210 ~~~~~gt~~Y~aPE~l~~~--~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~s  286 (396)
T 4dc2_A          210 TSTFCGTPNYIAPEILRGE--DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIPRSLS  286 (396)
T ss_dssp             BCCCCBCGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC-CCCCTTSC
T ss_pred             cccccCCcccCCchhhcCC--CCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc-cCCCCcCC
Confidence            3457899999999999875  68999999999999999999999996321         122333344433 35677899


Q ss_pred             HHHHHHHHHhcccCCCCCCCH------HHHhhCcCCCCC
Q 032711           86 RDARDFILKCLQVNPNDRPTA------AQLMEHPFVKRP  118 (135)
Q Consensus        86 ~~~~~li~~~l~~~p~~Rps~------~~~l~~~~~~~~  118 (135)
                      .++.+++.+||..||.+|+++      ++++.||||+..
T Consensus       287 ~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          287 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             HHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             HHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence            999999999999999999985      799999999864

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.85  E-value=2.3e-21  Score=137.27  Aligned_cols=102  Identities=27%  Similarity=0.448  Sum_probs=79.1

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC----------------
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP----------------   79 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~----------------   79 (135)
                      ...+||+.|+|||++.+.  .|+.++||||+|+++++|++|+.||.+.+..+.+..+......+                
T Consensus       221 ~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~  298 (464)
T 3ttj_A          221 TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV  298 (464)
T ss_dssp             ----CCCTTCCHHHHTTC--CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHH
T ss_pred             CCCcccccccCHHHHcCC--CCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHh
Confidence            346899999999999875  68999999999999999999999999888766665543311100                


Q ss_pred             --------------CCCc-----------ccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           80 --------------IPDS-----------VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        80 --------------~~~~-----------~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                                    .+..           .+.++.+|+.+||..||.+||++.++++||||+...
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~  363 (464)
T 3ttj_A          299 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY  363 (464)
T ss_dssp             TTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred             hcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhcc
Confidence                          0000           145789999999999999999999999999998644

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.85  E-value=5e-21  Score=129.44  Aligned_cols=110  Identities=24%  Similarity=0.270  Sum_probs=83.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC--CC-C---------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG--EL-P---------------   78 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~--~~-~---------------   78 (135)
                      ..+||+.|+|||++.+. ..++.++||||+|+++++|++|..||.+.+..+.+..+...  .. .               
T Consensus       167 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  245 (317)
T 2pmi_A          167 SEVVTLWYRAPDVLMGS-RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPN  245 (317)
T ss_dssp             CCCSCCTTCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTT
T ss_pred             CCcccccccCchHhhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccc
Confidence            35789999999999764 35899999999999999999999999988776655544321  00 0               


Q ss_pred             ---------------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCCCC
Q 032711           79 ---------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPT  127 (135)
Q Consensus        79 ---------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~~~  127 (135)
                                     ..+..++.++.+++.+||..||.+||++.++++||||..........++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~~~~~  309 (317)
T 2pmi_A          246 IQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHASMGGS  309 (317)
T ss_dssp             CCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC-------
T ss_pred             cccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccchhhcccc
Confidence                           0112467889999999999999999999999999999987766555544

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.85  E-value=5.5e-21  Score=128.97  Aligned_cols=103  Identities=29%  Similarity=0.404  Sum_probs=80.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc---CCCCC--------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR---GELPP--------------   79 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~---~~~~~--------------   79 (135)
                      ..+||+.|+|||++.+. ..++.++|+||+|++++++++|..||.+....+.+..+..   ...+.              
T Consensus       178 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  256 (311)
T 3niz_A          178 HEVVTLWYRAPDVLMGS-KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR  256 (311)
T ss_dssp             CCCCCCTTCCHHHHTTC-CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSC
T ss_pred             CCcccCCcCCHHHhcCC-CCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhc
Confidence            35789999999999764 3689999999999999999999999977654444333321   11100              


Q ss_pred             ------------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           80 ------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        80 ------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                                  ....++.++.+++.+||..||.+||++.++++||||+...+
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  309 (311)
T 3niz_A          257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDP  309 (311)
T ss_dssp             CCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred             ccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence                        01235678999999999999999999999999999998654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.85  E-value=4.1e-21  Score=134.77  Aligned_cols=115  Identities=26%  Similarity=0.398  Sum_probs=84.5

Q ss_pred             hhhhhhhhhh----hhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC-
Q 032711            5 TVEGLGNALR----RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP-   79 (135)
Q Consensus         5 ~~~~~~~~~~----~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~-   79 (135)
                      ++.|+|.+..    ..+.+||+.|+|||++.+.  .++.++||||+|+++++|++|..||.+.+..+.+..+......+ 
T Consensus       242 kL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~  319 (429)
T 3kvw_A          242 KVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGA--RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPS  319 (429)
T ss_dssp             EECCCTTCEETTCCCCSSCSCGGGCCHHHHHTB--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred             EEeecccceecCCcccccCCCCCccChHHHhCC--CCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence            3455554422    2345899999999999875  68999999999999999999999998887766554433210000 


Q ss_pred             ---------------------------------------------------------CCCcccHHHHHHHHHhcccCCCC
Q 032711           80 ---------------------------------------------------------IPDSVSRDARDFILKCLQVNPND  102 (135)
Q Consensus        80 ---------------------------------------------------------~~~~~~~~~~~li~~~l~~~p~~  102 (135)
                                                                               .+...++.+.+|+.+||..||.+
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~  399 (429)
T 3kvw_A          320 QKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAV  399 (429)
T ss_dssp             HHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTT
T ss_pred             HHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhh
Confidence                                                                     01123677899999999999999


Q ss_pred             CCCHHHHhhCcCCCCCCCC
Q 032711          103 RPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus       103 Rps~~~~l~~~~~~~~~~~  121 (135)
                      ||++.++++||||+...+.
T Consensus       400 Rpta~e~L~Hpw~~~~~~~  418 (429)
T 3kvw_A          400 RMTPGQALRHPWLRRRLPK  418 (429)
T ss_dssp             SCCHHHHHTSTTTC-----
T ss_pred             CCCHHHHhCChhhccCCCC
Confidence            9999999999999986543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.85  E-value=7.9e-21  Score=139.68  Aligned_cols=101  Identities=21%  Similarity=0.357  Sum_probs=90.3

Q ss_pred             hhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ..+.+||+.|+|||++...  .|+.++|+||+|+++|+|++|..||.+.+..+.+..|..... ..+..++.++.+|+.+
T Consensus       499 ~~~~~GT~~Y~APE~l~~~--~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~  575 (674)
T 3pfq_A          499 TKTFCGTPDYIAPEIIAYQ--PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV-AYPKSMSKEAVAICKG  575 (674)
T ss_dssp             BCCCCSCSSSCCHHHHTCC--CBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCC-CCCTTSCHHHHHHHHH
T ss_pred             cccccCCCcccCHhhhcCC--CCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC-CCCccCCHHHHHHHHH
Confidence            3457899999999999774  689999999999999999999999999888888888877654 5677899999999999


Q ss_pred             hcccCCCCCCCH-----HHHhhCcCCCCC
Q 032711           95 CLQVNPNDRPTA-----AQLMEHPFVKRP  118 (135)
Q Consensus        95 ~l~~~p~~Rps~-----~~~l~~~~~~~~  118 (135)
                      ||..||.+|+++     ++++.|+||+..
T Consensus       576 lL~~dP~~R~~~~~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          576 LMTKHPGKRLGCGPEGERDIKEHAFFRYI  604 (674)
T ss_dssp             HSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred             HccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence            999999999997     899999999864

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.85  E-value=1.1e-20  Score=131.37  Aligned_cols=108  Identities=22%  Similarity=0.357  Sum_probs=86.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC-------------------CC
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG-------------------EL   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~-------------------~~   77 (135)
                      ..+||+.|+|||++.+. ..++.++||||+|+++++|++|..||.+.+..+.+..+.+.                   ..
T Consensus       200 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~  278 (394)
T 4e7w_A          200 SYICSRYYRAPELIFGA-TNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKF  278 (394)
T ss_dssp             SSCSCGGGCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCC
T ss_pred             ccccCcCccCHHHHcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhcc
Confidence            45789999999999764 35899999999999999999999999988776665554321                   00


Q ss_pred             CC---------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCC
Q 032711           78 PP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL  125 (135)
Q Consensus        78 ~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~  125 (135)
                      +.         .+...+.++.+++.+||..||.+||++.+++.||||..........
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~~  335 (394)
T 4e7w_A          279 PQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEARM  335 (394)
T ss_dssp             CCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSSCCCC
T ss_pred             ccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhccccccC
Confidence            00         1234678999999999999999999999999999999766554444

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.85  E-value=7.7e-21  Score=133.02  Aligned_cols=108  Identities=19%  Similarity=0.291  Sum_probs=85.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC--------------C-----C
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG--------------E-----L   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~--------------~-----~   77 (135)
                      ..+||+.|+|||++.+. ..++.++||||+||++|+|++|+.||.+.+..+.+..+.+.              .     .
T Consensus       215 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~  293 (420)
T 1j1b_A          215 SYICSRYYRAPELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF  293 (420)
T ss_dssp             SCCSCTTSCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCC
T ss_pred             eeeeCCCcCCHHHHcCC-CCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhcc
Confidence            45789999999999764 36899999999999999999999999988766655544321              0     0


Q ss_pred             CC---------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCC
Q 032711           78 PP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL  125 (135)
Q Consensus        78 ~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~  125 (135)
                      +.         .+...+.++.+|+.+||..||.+|+++.+++.|+||.........+
T Consensus       294 p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~~  350 (420)
T 1j1b_A          294 PQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKL  350 (420)
T ss_dssp             CCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCTTCCC
T ss_pred             CccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccccccccC
Confidence            00         1234678999999999999999999999999999998765544443

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.84  E-value=8.2e-21  Score=129.92  Aligned_cols=100  Identities=23%  Similarity=0.389  Sum_probs=81.6

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---------cHHHHHHHHHcCCCCCCCCcccH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV---------EWVQALFKIARGELPPIPDSVSR   86 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~---------~~~~~~~~i~~~~~~~~~~~~~~   86 (135)
                      .+.+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||...         ........+.... ...+..++.
T Consensus       168 ~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~s~  244 (345)
T 3a8x_A          168 STFCGTPNYIAPEILRGE--DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIPRSLSV  244 (345)
T ss_dssp             CCCCSCGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-CCCCTTSCH
T ss_pred             cccCCCccccCccccCCC--CCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-CCCCCCCCH
Confidence            356899999999999875  6899999999999999999999999642         2222333444443 356778899


Q ss_pred             HHHHHHHHhcccCCCCCCCH------HHHhhCcCCCCC
Q 032711           87 DARDFILKCLQVNPNDRPTA------AQLMEHPFVKRP  118 (135)
Q Consensus        87 ~~~~li~~~l~~~p~~Rps~------~~~l~~~~~~~~  118 (135)
                      .+.+++.+||..||.+|+++      .+++.||||...
T Consensus       245 ~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          245 KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             HHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence            99999999999999999985      799999999864

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.84  E-value=2.6e-21  Score=133.77  Aligned_cols=112  Identities=25%  Similarity=0.391  Sum_probs=83.5

Q ss_pred             hhhhhhhhhh----hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC--
Q 032711            6 VEGLGNALRR----KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP--   79 (135)
Q Consensus         6 ~~~~~~~~~~----~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~--   79 (135)
                      +.|+|.....    ...+||+.|+|||++.+.  .++.++||||+|+++++|++|..||.+.+..+.+..+......+  
T Consensus       202 L~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~  279 (382)
T 2vx3_A          202 IVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGM--PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPA  279 (382)
T ss_dssp             ECCCTTCEETTCCCCSSCSCGGGCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCH
T ss_pred             EEeccCceecccccccccCCccccChHHHcCC--CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence            4455544322    346899999999999875  68999999999999999999999999887766655543210000  


Q ss_pred             ---------------CCC----------------------------------------------cccHHHHHHHHHhccc
Q 032711           80 ---------------IPD----------------------------------------------SVSRDARDFILKCLQV   98 (135)
Q Consensus        80 ---------------~~~----------------------------------------------~~~~~~~~li~~~l~~   98 (135)
                                     .+.                                              .....+.+|+.+||..
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~  359 (382)
T 2vx3_A          280 HILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDY  359 (382)
T ss_dssp             HHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCS
T ss_pred             HHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCC
Confidence                           000                                              0013678999999999


Q ss_pred             CCCCCCCHHHHhhCcCCCCCC
Q 032711           99 NPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        99 ~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      ||.+||++.++++||||+...
T Consensus       360 dP~~Rpta~e~L~hp~f~~~~  380 (382)
T 2vx3_A          360 DPKTRIQPYYALQHSFFKKTA  380 (382)
T ss_dssp             CTTTSCCHHHHTTSGGGCC--
T ss_pred             ChhhCCCHHHHhcCcccccCC
Confidence            999999999999999998754

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.84  E-value=1.3e-20  Score=128.00  Aligned_cols=100  Identities=25%  Similarity=0.460  Sum_probs=87.6

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...+||+.|+|||++...  .++.++|+||+|+++|+|++|..||.+.+.......+..... ..+..++..+.+++.+|
T Consensus       179 ~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~li~~~  255 (327)
T 3a62_A          179 HTFCGTIEYMAPEILMRS--GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL-NLPPYLTQEARDLLKKL  255 (327)
T ss_dssp             CTTSSCCTTSCHHHHTTS--CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-CCCTTSCHHHHHHHHHH
T ss_pred             cccCCCcCccCHhhCcCC--CCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHH
Confidence            346899999999999774  689999999999999999999999998888777777766554 45677899999999999


Q ss_pred             cccCCCCCC-----CHHHHhhCcCCCCC
Q 032711           96 LQVNPNDRP-----TAAQLMEHPFVKRP  118 (135)
Q Consensus        96 l~~~p~~Rp-----s~~~~l~~~~~~~~  118 (135)
                      |..+|.+||     ++.++++||||...
T Consensus       256 L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          256 LKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             SCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             HhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence            999999999     78899999999864

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.84  E-value=8.4e-21  Score=129.95  Aligned_cols=112  Identities=21%  Similarity=0.275  Sum_probs=86.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-------------------   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-------------------   77 (135)
                      ...||+.|+|||++.+. ..++.++||||+|++++++++|..||.+.+....+..+.....                   
T Consensus       190 ~~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (360)
T 3e3p_A          190 AYICSRYYRAPELIFGN-QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDL  268 (360)
T ss_dssp             STTSCGGGCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGG
T ss_pred             cccCCcceeCHHHHcCC-CCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccc
Confidence            35789999999999764 3589999999999999999999999998877665554432100                   


Q ss_pred             ------------CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCCCCcc
Q 032711           78 ------------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPH  129 (135)
Q Consensus        78 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~~~~~  129 (135)
                                  .......+.++.+++.+||..||.+||++.++++||||..........+...
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~~~~~~~  332 (360)
T 3e3p_A          269 YNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPATKLPNNK  332 (360)
T ss_dssp             GCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCTTCCCTTSC
T ss_pred             cccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCccccCCCCC
Confidence                        0111225678999999999999999999999999999998666555444433

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.84  E-value=1.9e-20  Score=129.97  Aligned_cols=102  Identities=25%  Similarity=0.424  Sum_probs=87.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC---CCCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP---PIPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++...  .++.++||||+|+++|+|++|..||.+.+..+.+..+......   .....++.++.+++.
T Consensus       209 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  286 (387)
T 1kob_A          209 VTTATAEFAAPEIVDRE--PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIK  286 (387)
T ss_dssp             EECSSGGGCCHHHHTTC--CBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHH
T ss_pred             eeccCCCccCchhccCC--CCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHH
Confidence            34799999999999874  6899999999999999999999999998877777776655432   233567899999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      +||..||.+||++.++++|+||.....
T Consensus       287 ~~L~~dP~~Rpt~~ell~hp~~~~~~~  313 (387)
T 1kob_A          287 NLLQKEPRKRLTVHDALEHPWLKGDHS  313 (387)
T ss_dssp             TTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred             HHcCCChhHCcCHHHHhhCccccCCcc
Confidence            999999999999999999999987543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.84  E-value=1.3e-20  Score=127.88  Aligned_cols=100  Identities=25%  Similarity=0.399  Sum_probs=84.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC---CCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP---IPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++...  .++.++|+||+|+++++|++|..||.+....+....+.......   .....+..+.+++.
T Consensus       176 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  253 (326)
T 2y0a_A          176 NIFGTPEFVAPEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR  253 (326)
T ss_dssp             CCCSCTTTCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHH
T ss_pred             cccCCcCcCCceeecCC--CCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHH
Confidence            45799999999999764  68999999999999999999999999888777776665544321   12457889999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      +||..||.+||++.++++||||...
T Consensus       254 ~~L~~dP~~Rpt~~e~l~hp~~~~~  278 (326)
T 2y0a_A          254 RLLVKDPKKRMTIQDSLQHPWIKPK  278 (326)
T ss_dssp             HHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             HHccCChhhCCCHHHHhcCCCccCC
Confidence            9999999999999999999999864

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.84  E-value=6.3e-21  Score=131.21  Aligned_cols=99  Identities=25%  Similarity=0.407  Sum_probs=85.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC---CCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI---PDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++.+.  .++.++||||+|+++|+|++|..||.+.+.......+..+.....   ...++.++.+++.
T Consensus       189 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  266 (362)
T 2bdw_A          189 GFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID  266 (362)
T ss_dssp             CSCSCTTTCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHH
T ss_pred             cCCCCccccCHHHHccC--CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHH
Confidence            45899999999999874  689999999999999999999999998887777777766654211   2357899999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      +||..||.+||++.++++||||..
T Consensus       267 ~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          267 SMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             HHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             HHcCCChhhCcCHHHHhcCcccCC
Confidence            999999999999999999999975

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.84  E-value=1.5e-20  Score=125.39  Aligned_cols=100  Identities=28%  Similarity=0.432  Sum_probs=79.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC---CCC---------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG---ELP---------------   78 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~---~~~---------------   78 (135)
                      ..+||+.|+|||++.+. ..++.++|+||+|+++++|++|..||.+.+..+.+..+...   ...               
T Consensus       159 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (288)
T 1ob3_A          159 HEIVTLWYRAPDVLMGS-KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN  237 (288)
T ss_dssp             ---CCCTTCCHHHHTTC-CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred             cccccccccCchheeCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccc
Confidence            34789999999999764 35899999999999999999999999888776655544321   000               


Q ss_pred             ----------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           79 ----------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        79 ----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                                .....++..+.+++.+||..||.+||++.++++||||+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             cccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence                      011346788999999999999999999999999999985

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.84  E-value=1.4e-20  Score=133.58  Aligned_cols=103  Identities=24%  Similarity=0.350  Sum_probs=88.3

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      .+.+||+.|+|||++.+. ...+.++|+||+|+++|+|++|..||.+.+.......+..+.. ..+..++..+.+++.+|
T Consensus       173 ~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~Li~~~  250 (476)
T 2y94_A          173 RTSCGSPNYAAPEVISGR-LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIF-YTPQYLNPSVISLLKHM  250 (476)
T ss_dssp             CCCCSCSTTCCHHHHTTC-CBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCC-CCCTTCCHHHHHHHHHH
T ss_pred             cccCCCcCeEChhhccCC-CCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCc-CCCccCCHHHHHHHHHH
Confidence            356899999999999875 2347899999999999999999999988877777777766654 45667889999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      |..||.+||++.+++.||||....+
T Consensus       251 L~~dP~~Rpt~~eil~hp~~~~~~~  275 (476)
T 2y94_A          251 LQVDPMKRATIKDIREHEWFKQDLP  275 (476)
T ss_dssp             TCSSTTTSCCHHHHHTCHHHHTTCC
T ss_pred             cCCCchhCcCHHHHHhCHHhhhcCc
Confidence            9999999999999999999987554

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.84  E-value=7.6e-21  Score=130.69  Aligned_cols=104  Identities=25%  Similarity=0.377  Sum_probs=81.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC--C------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG--E------------------   76 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~--~------------------   76 (135)
                      ..+||+.|+|||++... ..++.++||||+|+++++|++|..||.+.+..+.+..+...  .                  
T Consensus       190 ~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  268 (364)
T 3qyz_A          190 EYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL  268 (364)
T ss_dssp             CCCSCGGGCCHHHHHTB-CSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHH
T ss_pred             ccccccCCCCCHHhcCC-CCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHH
Confidence            45899999999998764 35899999999999999999999999876654444333210  0                  


Q ss_pred             ----C-CC-----CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           77 ----L-PP-----IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        77 ----~-~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                          . ..     ....++.++.+++.+||..||.+||++.++++||||......
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~  323 (364)
T 3qyz_A          269 LSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP  323 (364)
T ss_dssp             HTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCCG
T ss_pred             HhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccCc
Confidence                0 00     113467889999999999999999999999999999986543

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=2.6e-20  Score=127.22  Aligned_cols=105  Identities=23%  Similarity=0.273  Sum_probs=83.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC---C---------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---P---------------   78 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~---~---------------   78 (135)
                      ..+||+.|+|||++.+. ..++.++|+||+|+++++|++|.+||.+.+..+.+..+.....   .               
T Consensus       171 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  249 (346)
T 1ua2_A          171 HQVVTRWYRAPELLFGA-RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF  249 (346)
T ss_dssp             CSCCCCTTCCHHHHTTC-SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC
T ss_pred             cccccccccCchHhhCC-CCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccc
Confidence            35789999999999764 3589999999999999999999999988877666655432100   0               


Q ss_pred             ----CC-----CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           79 ----PI-----PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        79 ----~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                          ..     ....+..+.+++.+||..||.+||++.++++|+||.......
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~~~  302 (346)
T 1ua2_A          250 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPT  302 (346)
T ss_dssp             CCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCCC
T ss_pred             cccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCCCC
Confidence                00     134568899999999999999999999999999998754433

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.84  E-value=2.3e-20  Score=126.45  Aligned_cols=101  Identities=32%  Similarity=0.485  Sum_probs=85.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC--CCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP--IPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~li~~   94 (135)
                      ..+||+.|+|||++...  .++.++|+||+|+++++|++|..||.+.+.......+.....+.  ....++..+.+++.+
T Consensus       200 ~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  277 (321)
T 2c30_A          200 SLVGTPYWMAPEVISRS--LYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLER  277 (321)
T ss_dssp             CCCSCGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHH
T ss_pred             cccCCccccCHhhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHH
Confidence            45899999999999764  68999999999999999999999998887776666665554322  234578899999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      ||..||.+||++.++++||||....
T Consensus       278 ~l~~dp~~Rps~~ell~hp~~~~~~  302 (321)
T 2c30_A          278 MLVRDPQERATAQELLDHPFLLQTG  302 (321)
T ss_dssp             HSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred             HccCChhhCcCHHHHhcChhhccCC
Confidence            9999999999999999999998654

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.84  E-value=2e-20  Score=125.47  Aligned_cols=103  Identities=21%  Similarity=0.356  Sum_probs=87.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...||+.|+|||++.+....++.++|+||+|++++++++|..||.+.+.......+..... ..+..++..+.+++.+||
T Consensus       170 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~l~~li~~~l  248 (305)
T 2wtk_C          170 TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSY-AIPGDCGPPLSDLLKGML  248 (305)
T ss_dssp             CCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC-CCCSSSCHHHHHHHHHHT
T ss_pred             cCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCC-CCCCccCHHHHHHHHHHc
Confidence            4568999999999976422347799999999999999999999998887777777766654 456778899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      ..||.+||++.++++|+||....+
T Consensus       249 ~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          249 EYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             CSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             cCChhhCCCHHHHhcCcccccCCC
Confidence            999999999999999999987555

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.84  E-value=1.7e-20  Score=129.63  Aligned_cols=100  Identities=20%  Similarity=0.316  Sum_probs=87.8

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      .+.+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+..+....+..... ..+..++..+.+++.+|
T Consensus       197 ~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~l  273 (373)
T 2r5t_A          197 STFCGTPEYLAPEVLHKQ--PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL-QLKPNITNSARHLLEGL  273 (373)
T ss_dssp             CSBSCCCCCCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCC-CCCSSSCHHHHHHHHHH
T ss_pred             ccccCCccccCHHHhCCC--CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc-CCCCCCCHHHHHHHHHH
Confidence            456899999999999875  689999999999999999999999999888877777776654 45667899999999999


Q ss_pred             cccCCCCCCCH----HHHhhCcCCCCC
Q 032711           96 LQVNPNDRPTA----AQLMEHPFVKRP  118 (135)
Q Consensus        96 l~~~p~~Rps~----~~~l~~~~~~~~  118 (135)
                      |..||.+|+++    .+++.|+||+..
T Consensus       274 L~~dp~~R~~~~~~~~~i~~h~~f~~~  300 (373)
T 2r5t_A          274 LQKDRTKRLGAKDDFMEIKSHVFFSLI  300 (373)
T ss_dssp             TCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred             cccCHHhCCCCCCCHHHHhCCccccCC
Confidence            99999999986    689999999863

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.84  E-value=5.4e-21  Score=132.38  Aligned_cols=103  Identities=30%  Similarity=0.486  Sum_probs=76.2

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--------------------   77 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--------------------   77 (135)
                      .+||+.|+|||++.+....++.++||||+|+++++|++|..||.+.+.......+..+..                    
T Consensus       195 ~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (389)
T 3gni_B          195 SVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSR  274 (389)
T ss_dssp             CTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------------------
T ss_pred             ccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccc
Confidence            478999999999987433689999999999999999999999976543322222111100                    


Q ss_pred             -------------------------CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           78 -------------------------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        78 -------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                                               .+.+..++..+.+|+.+||..||.+||++.++++||||.....
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~  342 (389)
T 3gni_B          275 SVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR  342 (389)
T ss_dssp             -------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred             cccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence                                     0123456788999999999999999999999999999987543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.83  E-value=3.2e-20  Score=125.85  Aligned_cols=107  Identities=16%  Similarity=0.177  Sum_probs=82.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH-HHHHHHHcC-CCCCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV-QALFKIARG-ELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~-~~~~~i~~~-~~~~~~~~~~~~~~~li~~   94 (135)
                      ..+||+.|+|||++.+. ..++.++||||+|+++++|++|..||...... .....+... ........++..+.+++.+
T Consensus       166 ~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (323)
T 3tki_A          166 KMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK  244 (323)
T ss_dssp             SCCSCGGGSCHHHHHCS-SBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHH
T ss_pred             CCccCcCccCcHHhccC-CCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHH
Confidence            46899999999999875 23477899999999999999999999765543 222222222 2223335678999999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWG  124 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~  124 (135)
                      ||..||.+||++.++++|+||.........
T Consensus       245 ~L~~dP~~R~t~~eil~h~~~~~~~~~~~~  274 (323)
T 3tki_A          245 ILVENPSARITIPDIKKDRWYNKPLKKGAK  274 (323)
T ss_dssp             HSCSSTTTSCCHHHHTTCTTTTCCCCCCCC
T ss_pred             HccCChhhCcCHHHHhhChhhccccccccc
Confidence            999999999999999999999876544433

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.83  E-value=1.6e-20  Score=124.96  Aligned_cols=103  Identities=23%  Similarity=0.369  Sum_probs=88.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...|++.|+|||++.+.  .++.++|+|++|++++++++|..||...+.......+..... ..+..++..+.+++.+||
T Consensus       171 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l  247 (284)
T 2vgo_A          171 TMCGTLDYLPPEMIEGK--THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL-KFPPFLSDGSKDLISKLL  247 (284)
T ss_dssp             CCCSCGGGCCHHHHTTC--CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC-CCCTTSCHHHHHHHHHHS
T ss_pred             cccCCCCcCCHHHhccC--CCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcccc-CCCCcCCHHHHHHHHHHh
Confidence            45789999999999874  678999999999999999999999988877666666655443 456778899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                      ..+|.+||++.++++|+||.......
T Consensus       248 ~~~p~~Rps~~~ll~h~~~~~~~~~~  273 (284)
T 2vgo_A          248 RYHPPQRLPLKGVMEHPWVKANSRRV  273 (284)
T ss_dssp             CSSGGGSCCHHHHHTCHHHHHHCCCC
T ss_pred             hcCHhhCCCHHHHhhCHHHHhhcccc
Confidence            99999999999999999998755433

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.83  E-value=1.4e-20  Score=124.87  Aligned_cols=103  Identities=25%  Similarity=0.466  Sum_probs=87.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...|++.|+|||++.+.  .++.++|+|++|++++++++|..||...+.......+..... ..+...+..+.+++.+||
T Consensus       166 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l  242 (279)
T 3fdn_A          166 DLCGTLDYLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLISRLL  242 (279)
T ss_dssp             --CCCCTTCCHHHHTTC--CCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC-CCCTTSCHHHHHHHHHHC
T ss_pred             ccCCCCCccCHhHhccC--CCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCC-CCCCcCCHHHHHHHHHHh
Confidence            45789999999999764  678999999999999999999999998887777766655443 456778899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                      ..+|.+||++.++++||||.......
T Consensus       243 ~~~p~~Rps~~e~l~h~~~~~~~~~~  268 (279)
T 3fdn_A          243 KHNPSQRPMLREVLEHPWITANSSKP  268 (279)
T ss_dssp             CSSGGGSCCHHHHHHCHHHHHHCSSC
T ss_pred             ccChhhCCCHHHHhhCccccCCccCc
Confidence            99999999999999999998755433

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.83  E-value=2.1e-20  Score=130.11  Aligned_cols=104  Identities=20%  Similarity=0.228  Sum_probs=74.8

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH---------HHHHHHHHcC---CCCC----
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---------VQALFKIARG---ELPP----   79 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~---------~~~~~~i~~~---~~~~----   79 (135)
                      ...+||+.|+|||++.+. ..++.++||||+|+++|+|++|..||.+...         .+.+..+...   ....    
T Consensus       193 ~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~  271 (405)
T 3rgf_A          193 DPVVVTFWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWED  271 (405)
T ss_dssp             ----CCCTTCCHHHHTTC-CSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGG
T ss_pred             CCceecCcccCchhhcCC-CcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcch
Confidence            346899999999999874 3589999999999999999999999965432         1222222110   0000    


Q ss_pred             ------------------------------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           80 ------------------------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        80 ------------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                                                    .....+..+.+|+.+||..||.+||++.++++||||.....
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~  342 (405)
T 3rgf_A          272 IKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPL  342 (405)
T ss_dssp             GGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred             hhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCC
Confidence                                          00112567889999999999999999999999999987543

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.83  E-value=3.3e-20  Score=122.98  Aligned_cols=102  Identities=23%  Similarity=0.415  Sum_probs=89.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...|+..|+|||++...  .++.++|+||+|++++++++|..||...+.......+..+.....+..++.++.+++.+||
T Consensus       175 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l  252 (279)
T 2w5a_A          175 TFVGTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML  252 (279)
T ss_dssp             HHHSCCTTCCHHHHHCC---CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             ccCCCccccChHHhccC--CCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcccCHHHHHHHHHHc
Confidence            35789999999999874  6899999999999999999999999988877777777777766777788999999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      ..+|.+||++.++++|+|+....+
T Consensus       253 ~~~p~~Rps~~~ll~~~~~~~~~~  276 (279)
T 2w5a_A          253 NLKDYHRPSVEEILENPLILEHHH  276 (279)
T ss_dssp             CSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred             CCCcccCCCHHHHHhChhhhhhcc
Confidence            999999999999999999987543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.83  E-value=4.2e-20  Score=126.50  Aligned_cols=103  Identities=25%  Similarity=0.389  Sum_probs=81.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHH-HHHHHHcCCCC---CCCCcccHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQ-ALFKIARGELP---PIPDSVSRDARDFI   92 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~-~~~~i~~~~~~---~~~~~~~~~~~~li   92 (135)
                      ..+||+.|+|||++.+.  .++.++||||+|+++|++++|..||.+..... ....+......   +....++.++.+++
T Consensus       209 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  286 (349)
T 2w4o_A          209 TVCGTPGYCAPEILRGC--AYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLV  286 (349)
T ss_dssp             ----CGGGSCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHH
T ss_pred             cccCCCCccCHHHhcCC--CCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHH
Confidence            46799999999999874  68999999999999999999999997655433 44455544332   22356789999999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      .+||..||.+||++.++++||||......
T Consensus       287 ~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~  315 (349)
T 2w4o_A          287 RKLIVLDPKKRLTTFQALQHPWVTGKAAN  315 (349)
T ss_dssp             HTTSCSSGGGSCCHHHHHHSTTTTSTTCC
T ss_pred             HHHccCChhhCcCHHHHhcCcccCCCccc
Confidence            99999999999999999999999976543

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.83  E-value=1.1e-20  Score=129.25  Aligned_cols=100  Identities=31%  Similarity=0.481  Sum_probs=83.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC---CcHHHHHHHHHcCCCCC---CCCcccHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG---VEWVQALFKIARGELPP---IPDSVSRDARD   90 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~---~~~~~~~~~i~~~~~~~---~~~~~~~~~~~   90 (135)
                      +.+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+   ....+....+..+....   .+..++..+.+
T Consensus       179 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  256 (342)
T 2qr7_A          179 TPCYTANFVAPEVLERQ--GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD  256 (342)
T ss_dssp             CSSCCSSCCCHHHHHHH--HHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHH
T ss_pred             ccCCCccccCHHHhcCC--CCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHH
Confidence            46889999999999875  588999999999999999999999975   34455666666655422   23568899999


Q ss_pred             HHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           91 FILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        91 li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      ++.+||..||.+||++.++++||||..+
T Consensus       257 li~~~L~~dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          257 LVSKMLHVDPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             HHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred             HHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence            9999999999999999999999999764

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.83  E-value=2.8e-20  Score=128.21  Aligned_cols=104  Identities=31%  Similarity=0.390  Sum_probs=83.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-------------------   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-------------------   77 (135)
                      ..+||+.|+|||++.+. ..++.++|+||+|++++++++|..||.+.+..+.+..+.....                   
T Consensus       200 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  278 (371)
T 4exu_A          200 GYVVTRWYRAPEVILSW-MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI  278 (371)
T ss_dssp             CTTCCCTTSCHHHHSCC-SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHH
T ss_pred             CcccCccccCHHHhcCC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhh
Confidence            45789999999999863 3689999999999999999999999998776655544432100                   


Q ss_pred             ---C--------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           78 ---P--------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        78 ---~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                         .        ......+..+.+|+.+||..||.+||++.++++||||......
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~  333 (371)
T 4exu_A          279 QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDP  333 (371)
T ss_dssp             HHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCG
T ss_pred             hccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCCCc
Confidence               0        0123467899999999999999999999999999999875543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.83  E-value=2.6e-20  Score=127.56  Aligned_cols=104  Identities=35%  Similarity=0.560  Sum_probs=86.8

Q ss_pred             cccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC-CCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP-IPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~li~~   94 (135)
                      ..+||+.|+|||++... ...++.++||||+|+++++|++|..||.+.+.......+.....+. .+..++..+.+++.+
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  288 (348)
T 1u5q_A          209 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDS  288 (348)
T ss_dssp             CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHH
T ss_pred             cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Confidence            46899999999998631 2368999999999999999999999999888777666666554432 345678999999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      ||..+|.+||+++++++|+|+....+
T Consensus       289 ~l~~dP~~Rps~~~ll~h~~~~~~~~  314 (348)
T 1u5q_A          289 CLQKIPQDRPTSEVLLKHRFVLRERP  314 (348)
T ss_dssp             HTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred             HcccChhhCcCHHHHhhChhhhccCC
Confidence            99999999999999999999987544

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.83  E-value=5.1e-20  Score=122.73  Aligned_cols=99  Identities=24%  Similarity=0.385  Sum_probs=80.1

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--CCCCCcccHHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--PPIPDSVSRDARDFIL   93 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~li~   93 (135)
                      ....||+.|+|||++..   .++.++|+||+|++++++++|..||.+.+.......+.....  .......++.+.+++.
T Consensus       184 ~~~~~t~~y~aPE~~~~---~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  260 (285)
T 3is5_A          184 TNAAGTALYMAPEVFKR---DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLK  260 (285)
T ss_dssp             ---CTTGGGCCHHHHTT---CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHH
T ss_pred             cCcccccCcCChHHhcc---CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHH
Confidence            34678999999999864   589999999999999999999999998877666555544332  1222346889999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      +||..||.+||++.+++.||||+.
T Consensus       261 ~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          261 QMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             HHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             HHccCChhhCcCHHHHhcCHHhhc
Confidence            999999999999999999999975

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.83  E-value=4.8e-20  Score=127.01  Aligned_cols=103  Identities=25%  Similarity=0.339  Sum_probs=83.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC--------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE--------------------   76 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~--------------------   76 (135)
                      ..+||..|+|||++.+. ..++.++|+||+|+++++|++|+.||.+.+..+.+..+....                    
T Consensus       184 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~  262 (367)
T 1cm8_A          184 GYVVTRWYRAPEVILNW-MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYM  262 (367)
T ss_dssp             SSCSCGGGCCTHHHHTT-TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHH
T ss_pred             cCcCCCCcCCHHHHhCC-CCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHH
Confidence            45889999999999874 368999999999999999999999999887766555443210                    


Q ss_pred             ----------CCCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           77 ----------LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        77 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                                ........+..+.+++.+||..||.+||++++++.||||.....
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~  316 (367)
T 1cm8_A          263 KGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD  316 (367)
T ss_dssp             HHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred             HhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcC
Confidence                      00122456889999999999999999999999999999987544

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.83  E-value=6.5e-20  Score=124.04  Aligned_cols=100  Identities=25%  Similarity=0.346  Sum_probs=85.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC---CCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI---PDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~li~   93 (135)
                      ...||+.|+|||++...  .++.++|+||+|++++++++|..||.+....+....+........   ....+..+.+++.
T Consensus       177 ~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  254 (321)
T 2a2a_A          177 NIFGTPEFVAPEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIR  254 (321)
T ss_dssp             CCCSCGGGCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHH
T ss_pred             ccCCCCCccCcccccCC--CCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHH
Confidence            45799999999999764  689999999999999999999999998887777776665543211   2457888999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      +||..||.+||++.+++.||||...
T Consensus       255 ~~l~~dp~~Rps~~e~l~hp~~~~~  279 (321)
T 2a2a_A          255 KLLVKETRKRLTIQEALRHPWITPV  279 (321)
T ss_dssp             TTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred             HHcCCChhhCcCHHHHhcCccccCC
Confidence            9999999999999999999999864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.83  E-value=1.4e-20  Score=129.94  Aligned_cols=100  Identities=25%  Similarity=0.369  Sum_probs=85.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC---CCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP---IPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++...  .++.++||||+|+++++|++|..||.+.+..+.+..+.......   ....++.++.+++.
T Consensus       247 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  324 (373)
T 2x4f_A          247 VNFGTPEFLAPEVVNYD--FVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFIS  324 (373)
T ss_dssp             CCCSSCTTCCHHHHTTC--BCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHH
T ss_pred             cccCCCcEeChhhccCC--CCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHH
Confidence            34799999999999764  68999999999999999999999999988877777776654422   12457899999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      +||..+|.+||++.++++||||...
T Consensus       325 ~~L~~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          325 KLLIKEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             TTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred             HHcCCChhhCCCHHHHhcCcCcCCC
Confidence            9999999999999999999999863

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.83  E-value=3.4e-20  Score=126.75  Aligned_cols=103  Identities=24%  Similarity=0.295  Sum_probs=80.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC---CCCCCCCc----------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG---ELPPIPDS----------   83 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~---~~~~~~~~----------   83 (135)
                      ..+||+.|+|||++.+. ..++.++||||+|+++++|++|..||.+.+.......+...   ........          
T Consensus       187 ~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  265 (351)
T 3mi9_A          187 NRVVTLWYRPPELLLGE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKL  265 (351)
T ss_dssp             SSCSCGGGCCHHHHTTC-CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSS
T ss_pred             CcccccCccCchhhcCC-CCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhccc
Confidence            45789999999999764 35799999999999999999999999988776655544321   11111110          


Q ss_pred             ------------------ccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           84 ------------------VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        84 ------------------~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                                        .++.+.+++.+||..||.+||++.++++||||.....
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  320 (351)
T 3mi9_A          266 ELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPM  320 (351)
T ss_dssp             CCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSC
T ss_pred             ccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCC
Confidence                              1567899999999999999999999999999986443

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.83  E-value=2.8e-20  Score=124.60  Aligned_cols=100  Identities=21%  Similarity=0.338  Sum_probs=82.1

Q ss_pred             cccccccccchhhhhccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC-CCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGG-YGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-PIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~-~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~li~~   94 (135)
                      ...||+.|+|||++...... ++.++|+||+|+++++|++|..||.+.+.......+...... +....++..+.+++.+
T Consensus       196 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  275 (298)
T 2zv2_A          196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITR  275 (298)
T ss_dssp             CCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHH
T ss_pred             CCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHH
Confidence            45799999999999764211 377899999999999999999999888776666555554432 2335678999999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~  116 (135)
                      ||..||.+||++.++++||||.
T Consensus       276 ~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          276 MLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             HTCSCTTTSCCHHHHTTCHHHH
T ss_pred             HhhcChhhCCCHHHHhcCcccc
Confidence            9999999999999999999985

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.83  E-value=4e-20  Score=122.84  Aligned_cols=103  Identities=25%  Similarity=0.411  Sum_probs=87.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC---CCCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP---PIPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~li~   93 (135)
                      ...||+.|+|||++.+.  .++.++|+||+|++++++++|..||.+.+.......+......   +....++..+.+++.
T Consensus       166 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  243 (284)
T 3kk8_A          166 GFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID  243 (284)
T ss_dssp             CSCSCGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHH
T ss_pred             CCCCCcCCcCchhhcCC--CCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHH
Confidence            35789999999999874  6899999999999999999999999988877777666655432   222467899999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      +||..+|.+||++.++++|+||......
T Consensus       244 ~~l~~dp~~Rps~~~~l~h~~~~~~~~~  271 (284)
T 3kk8_A          244 SMLTVNPKKRITADQALKVPWICNRERV  271 (284)
T ss_dssp             HHSCSSTTTSCCHHHHTTSHHHHSCCCG
T ss_pred             HHcccChhhCCCHHHHhcCccccCChhH
Confidence            9999999999999999999999875543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.83  E-value=1.1e-19  Score=124.36  Aligned_cols=104  Identities=30%  Similarity=0.396  Sum_probs=82.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC---------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG---------------------   75 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~---------------------   75 (135)
                      ..+||+.|+|||++.+. ..++.++|+||+|++++++++|..||.+.+..+.+..+...                     
T Consensus       182 ~~~~t~~y~aPE~~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  260 (353)
T 3coi_A          182 GYVVTRWYRAPEVILSW-MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI  260 (353)
T ss_dssp             --CCSBCCSCHHHHSCC-SCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHH
T ss_pred             ccccCcCcCCHHHHhCc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHH
Confidence            35789999999999763 36899999999999999999999999887765554443220                     


Q ss_pred             ---------CCCCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           76 ---------ELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        76 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                               .........+..+.+++.+||..||.+||++.+++.||||......
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~  315 (353)
T 3coi_A          261 QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDP  315 (353)
T ss_dssp             HTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCG
T ss_pred             HhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhccCc
Confidence                     1112234578899999999999999999999999999999875543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.83  E-value=4.5e-21  Score=132.18  Aligned_cols=102  Identities=25%  Similarity=0.385  Sum_probs=78.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC----------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI----------------   80 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~----------------   80 (135)
                      ..+||+.|+|||++.+.  .++.++||||+|+++++|++|..||.+.+....+..+......+.                
T Consensus       185 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  262 (371)
T 2xrw_A          185 PYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE  262 (371)
T ss_dssp             -----CTTCCHHHHTTC--CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHH
T ss_pred             CceecCCccCHHHhcCC--CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHh
Confidence            45899999999999874  689999999999999999999999998887766665543221110                


Q ss_pred             -------------------CC------cccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           81 -------------------PD------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        81 -------------------~~------~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                                         +.      ..+..+.+|+.+||..||.+||++.++++||||+....
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~  327 (371)
T 2xrw_A          263 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYD  327 (371)
T ss_dssp             SSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred             hCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhhcC
Confidence                               00      01467899999999999999999999999999986544

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.83  E-value=9.9e-21  Score=134.39  Aligned_cols=102  Identities=24%  Similarity=0.397  Sum_probs=87.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC---CCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP---IPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++.+   .++.++||||+|+++|+|++|..||.+.+..+....+..+....   ....++..+.+++.
T Consensus       187 ~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  263 (484)
T 3nyv_A          187 DKIGTAYYIAPEVLHG---TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR  263 (484)
T ss_dssp             HHTTGGGTCCHHHHHT---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHH
T ss_pred             cCCCCccccCceeecC---CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHH
Confidence            4579999999999976   48999999999999999999999999988888888877765421   22457899999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      +||..+|.+||++.+++.||||......
T Consensus       264 ~~L~~dp~~R~s~~e~l~h~~~~~~~~~  291 (484)
T 3nyv_A          264 KMLTYVPSMRISARDALDHEWIQTYTKE  291 (484)
T ss_dssp             HHTCSSGGGSCCHHHHHTSHHHHHHTC-
T ss_pred             HHCCCChhHCcCHHHHhhChhhcccccc
Confidence            9999999999999999999999875543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.83  E-value=2.9e-20  Score=124.21  Aligned_cols=103  Identities=24%  Similarity=0.362  Sum_probs=77.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCC-CCCcHHHHHHHHHcC---CC---------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPY-FGVEWVQALFKIARG---EL---------------   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~-~~~~~~~~~~~i~~~---~~---------------   77 (135)
                      ..+||+.|+|||++.+. ..++.++|+||+|+++++|++|..|+ .+.+..+.+..+...   ..               
T Consensus       160 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  238 (292)
T 3o0g_A          160 AEVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP  238 (292)
T ss_dssp             SCCSCGGGCCHHHHTTC-SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred             CCccccCCcChHHHcCC-CCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccc
Confidence            35789999999999764 34799999999999999999887775 444444444443221   00               


Q ss_pred             ----------CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           78 ----------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        78 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                                ......++..+.+++.+||..||.+||+++++++||||+...+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~p  291 (292)
T 3o0g_A          239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP  291 (292)
T ss_dssp             CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC--
T ss_pred             cccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCCC
Confidence                      0112246788999999999999999999999999999987543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.83  E-value=7.9e-21  Score=128.79  Aligned_cols=101  Identities=22%  Similarity=0.320  Sum_probs=86.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC---CCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI---PDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+.......+........   ...++.++.+++.
T Consensus       162 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  239 (321)
T 1tki_A          162 LLFTAPEYYAPEVHQHD--VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVD  239 (321)
T ss_dssp             EEESCGGGSCHHHHTTC--EECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHH
T ss_pred             cccCChhhcCcHHhcCC--CCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHH
Confidence            35789999999999774  579999999999999999999999999888777777766654322   2457889999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      +||..||.+||++.++++||||....
T Consensus       240 ~~L~~dp~~Rpt~~e~l~hp~~~~~~  265 (321)
T 1tki_A          240 RLLVKERKSRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             TTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred             HHcCCChhHCcCHHHHhcChhhccCc
Confidence            99999999999999999999998643

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.82  E-value=2.7e-20  Score=129.98  Aligned_cols=103  Identities=26%  Similarity=0.401  Sum_probs=85.9

Q ss_pred             hcccccccccchhhhhccCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC---CCCCCCcccHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNG--GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE---LPPIPDSVSRDARD   90 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~--~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~   90 (135)
                      .+.+||+.|+|||++.....  .++.++|+||+|+++|+|++|..||.+.+.......+....   ..+....++.++.+
T Consensus       227 ~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~  306 (410)
T 3v8s_A          227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKN  306 (410)
T ss_dssp             CSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHH
T ss_pred             cCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHH
Confidence            36789999999999986421  27889999999999999999999999988877777765432   22334568999999


Q ss_pred             HHHHhcccCCCC--CCCHHHHhhCcCCCCC
Q 032711           91 FILKCLQVNPND--RPTAAQLMEHPFVKRP  118 (135)
Q Consensus        91 li~~~l~~~p~~--Rps~~~~l~~~~~~~~  118 (135)
                      ++.+||..+|.+  |++++++++||||+..
T Consensus       307 li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          307 LICAFLTDREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             HHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             HHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence            999999988888  9999999999999874

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.82  E-value=3.8e-20  Score=124.48  Aligned_cols=103  Identities=25%  Similarity=0.468  Sum_probs=77.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC--C------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG--E------------------   76 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~--~------------------   76 (135)
                      ..+||..|+|||++.+. ..++.++|+||+|++++++++|..||.+....+....+...  .                  
T Consensus       161 ~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (311)
T 4agu_A          161 DEVATRWYRSPELLVGD-TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV  239 (311)
T ss_dssp             -----GGGCCHHHHHTC-SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTC
T ss_pred             CCcCCccccChHHHhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccC
Confidence            45789999999999864 36899999999999999999999999887766554433211  0                  


Q ss_pred             CCCC----------CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           77 LPPI----------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        77 ~~~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      ..+.          ...++..+.+++.+||..||.+||+++++++||||.....
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  293 (311)
T 4agu_A          240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE  293 (311)
T ss_dssp             CCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred             cCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence            0000          1346778999999999999999999999999999997543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.82  E-value=2.8e-20  Score=127.42  Aligned_cols=98  Identities=26%  Similarity=0.553  Sum_probs=81.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC---CCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI---PDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++...  .++.++||||+|+++|+|++|..||.+.. ......+..+.....   ...++..+.+++.
T Consensus       192 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  268 (351)
T 3c0i_A          192 GRVGTPHFMAPEVVKRE--PYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESAKDLVR  268 (351)
T ss_dssp             CCCSCGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCCHHHHTTSCHHHHHHHH
T ss_pred             CCcCCcCccCHHHHcCC--CCCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCCccccccCCHHHHHHHH
Confidence            45799999999999874  68999999999999999999999998754 344445555544222   1457889999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      +||..||.+||++.++++||||..
T Consensus       269 ~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          269 RMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             HHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             HHCCCChhHCcCHHHHhcChhhcC
Confidence            999999999999999999999985

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.82  E-value=2.1e-20  Score=132.81  Aligned_cols=103  Identities=25%  Similarity=0.442  Sum_probs=88.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC---CCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP---IPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++.+   .++.++||||+|+++|++++|..||.+.+..+.+..+..+....   ....++..+.+++.
T Consensus       182 ~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  258 (486)
T 3mwu_A          182 DRIGTAYYIAPEVLRG---TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR  258 (486)
T ss_dssp             CCTTGGGGCCGGGGGS---CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHH
T ss_pred             CCcCCCCCCCHHHhCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHH
Confidence            4589999999999975   48999999999999999999999999988888887777665422   22457899999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                      +||..+|.+||++.+++.||||.......
T Consensus       259 ~~L~~dp~~R~t~~~~l~hp~~~~~~~~~  287 (486)
T 3mwu_A          259 KMLTFHPSLRITATQCLEHPWIQKYSSET  287 (486)
T ss_dssp             HHTCSSTTTSCCHHHHHHCHHHHHTCCCC
T ss_pred             HHcCCChhhCcCHHHHhcCHhhccCcccC
Confidence            99999999999999999999998765443

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.82  E-value=3.5e-20  Score=124.87  Aligned_cols=103  Identities=26%  Similarity=0.421  Sum_probs=77.1

Q ss_pred             cccccccccchhhhhccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCc---------------HHHHHHHHHcCCCC
Q 032711           17 WHVSRWNSLTDQVVNSKN---GGYGLPADIWSVGCTVLEMLTRCRPYFGVE---------------WVQALFKIARGELP   78 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~---~~~~~~~dvws~G~~l~~l~~g~~p~~~~~---------------~~~~~~~i~~~~~~   78 (135)
                      ..+||+.|+|||++....   ..++.++||||+|+++++|++|..||.+..               .......+..... 
T Consensus       180 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-  258 (316)
T 2ac3_A          180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKY-  258 (316)
T ss_dssp             --CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCC-
T ss_pred             cccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCc-
Confidence            356999999999997410   147889999999999999999999997643               1223344444433 


Q ss_pred             CCC----CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           79 PIP----DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        79 ~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      ..+    ..++..+.+++.+||..||.+||++.++++||||....+
T Consensus       259 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~  304 (316)
T 2ac3_A          259 EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP  304 (316)
T ss_dssp             CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC----
T ss_pred             ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCC
Confidence            222    357889999999999999999999999999999997543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.82  E-value=2.5e-20  Score=127.76  Aligned_cols=109  Identities=24%  Similarity=0.390  Sum_probs=82.0

Q ss_pred             hhhhhhhhhh----hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC--
Q 032711            6 VEGLGNALRR----KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP--   79 (135)
Q Consensus         6 ~~~~~~~~~~----~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~--   79 (135)
                      +.++|.....    ...+||+.|+|||++.+.  .++.++||||+|+++|+|++|+.||.+.+..+.+..+.......  
T Consensus       203 l~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~  280 (360)
T 3llt_A          203 LIDFGCATFKSDYHGSIINTRQYRAPEVILNL--GWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPK  280 (360)
T ss_dssp             ECCCTTCEETTSCCCSCCSCGGGCCHHHHTTC--CCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCH
T ss_pred             EEeccCceecCCCCcCccCcccccCcHHHcCC--CCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCH
Confidence            4455544322    345789999999999875  68999999999999999999999998877665554443211100  


Q ss_pred             -----------------------CC--------------------CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCC
Q 032711           80 -----------------------IP--------------------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        80 -----------------------~~--------------------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~  116 (135)
                                             .+                    ......+.+|+.+||..||.+||++.++++||||+
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          281 NMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence                                   00                    01125677999999999999999999999999985

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.82  E-value=7.8e-20  Score=125.85  Aligned_cols=101  Identities=27%  Similarity=0.474  Sum_probs=83.5

Q ss_pred             hcccccccccchhhhhcc----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC---CCcccHHH
Q 032711           16 KWHVSRWNSLTDQVVNSK----NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI---PDSVSRDA   88 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~----~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~   88 (135)
                      ...+||+.|+|||++.+.    ...++.++|+||+|+++|+|++|..||.+.+.......+..+.....   ....+..+
T Consensus       257 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  336 (365)
T 2y7j_A          257 RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTV  336 (365)
T ss_dssp             CCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHH
T ss_pred             ccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHH
Confidence            346899999999998742    12478899999999999999999999988877766666665544221   24567889


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhhCcCCC
Q 032711           89 RDFILKCLQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        89 ~~li~~~l~~~p~~Rps~~~~l~~~~~~  116 (135)
                      .+++.+||..||.+||++.++++||||.
T Consensus       337 ~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          337 KDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             HHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence            9999999999999999999999999996

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.82  E-value=3.5e-20  Score=128.22  Aligned_cols=100  Identities=21%  Similarity=0.373  Sum_probs=82.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC-------------------C
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE-------------------L   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~-------------------~   77 (135)
                      ...||..|+|||++.+. ..++.++||||+|+++++|++|..||.+.+..+.+..+....                   .
T Consensus       200 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~  278 (383)
T 3eb0_A          200 AYICSRFYRAPELMLGA-TEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRF  278 (383)
T ss_dssp             CCCCCSSCCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCC
T ss_pred             CcccCCCccCHHHhcCC-CCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccC
Confidence            45789999999999864 358999999999999999999999999887776665543210                   0


Q ss_pred             CC---------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           78 PP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        78 ~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      +.         .+...+..+.+++.+||..+|.+||++.++++||||..
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          279 PTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             CCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             CccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence            00         23457888999999999999999999999999999975

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.82  E-value=5.2e-20  Score=127.75  Aligned_cols=104  Identities=22%  Similarity=0.431  Sum_probs=82.1

Q ss_pred             hcccccccccchhhhhcc---------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHcCCC-CCCCCcc
Q 032711           16 KWHVSRWNSLTDQVVNSK---------NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WVQALFKIARGEL-PPIPDSV   84 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~---------~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~-~~~~~~~i~~~~~-~~~~~~~   84 (135)
                      ...+||+.|+|||++...         ...++.++||||+|+++|+|++|..||.... ....+..+..... ...+...
T Consensus       214 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (390)
T 2zmd_A          214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP  293 (390)
T ss_dssp             CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCS
T ss_pred             CCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccc
Confidence            346899999999999751         1258899999999999999999999997653 3344444444332 3445666


Q ss_pred             cHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           85 SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        85 ~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      +..+.+++.+||..||.+||++.++++||||....
T Consensus       294 ~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          294 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             hHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence            88999999999999999999999999999998644

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.82  E-value=1.3e-21  Score=133.49  Aligned_cols=103  Identities=24%  Similarity=0.317  Sum_probs=81.4

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...+||+.|+|||++.+. ...+.++||||+|+++|++++|..||.+.........+... ....+..++..+.+++.+|
T Consensus       165 ~~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~  242 (336)
T 3h4j_B          165 KTSCGSPNYAAPEVINGK-LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSC-VYVMPDFLSPGAQSLIRRM  242 (336)
T ss_dssp             CCCTTSTTTSCGGGSCCS-GGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSS-CCCCCTTSCHHHHHHHHTT
T ss_pred             ccccCCcCcCCHHHHcCC-CCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC-CCCCcccCCHHHHHHHHHH
Confidence            356899999999999864 22378999999999999999999999765433222222222 2245667899999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      |..||.+||+++++++||||+...+
T Consensus       243 L~~dP~~Rpt~~eil~hp~~~~~~~  267 (336)
T 3h4j_B          243 IVADPMQRITIQEIRRDPWFNVNLP  267 (336)
T ss_dssp             SCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred             cCCChhHCcCHHHHHhChhhccCCc
Confidence            9999999999999999999987544

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.82  E-value=5.3e-20  Score=126.41  Aligned_cols=102  Identities=26%  Similarity=0.435  Sum_probs=75.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHHHc--CCC-----------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE------WVQALFKIAR--GEL-----------   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~------~~~~~~~i~~--~~~-----------   77 (135)
                      ..+||+.|+|||++.+.  .++.++||||+|+++|+|++|..||...+      ....+..+..  +..           
T Consensus       194 ~~~~t~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  271 (373)
T 1q8y_A          194 NSIQTREYRSPEVLLGA--PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYT  271 (373)
T ss_dssp             SCCSCGGGCCHHHHHTC--CCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTH
T ss_pred             CCCCCccccCcHHHhCC--CCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchh
Confidence            45789999999999875  68999999999999999999999997543      1122222111  000           


Q ss_pred             ----------------------------CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           78 ----------------------------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        78 ----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                                                  ...+...+..+.+|+.+||..||.+||++.++++||||.....
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  342 (373)
T 1q8y_A          272 RTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG  342 (373)
T ss_dssp             HHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTT
T ss_pred             hhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccC
Confidence                                        0122345678889999999999999999999999999998544

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.82  E-value=7e-20  Score=127.99  Aligned_cols=104  Identities=27%  Similarity=0.428  Sum_probs=82.9

Q ss_pred             cccccccccchhhhhcc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC----CCCCCCCcccHH
Q 032711           17 WHVSRWNSLTDQVVNSK-----NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG----ELPPIPDSVSRD   87 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~-----~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~----~~~~~~~~~~~~   87 (135)
                      ..+||+.|+|||++...     ...++.++|+||+|+++|+|++|..||.+.+..+....+...    ..+..+..++.+
T Consensus       222 ~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~  301 (412)
T 2vd5_A          222 VAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEE  301 (412)
T ss_dssp             SCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHH
T ss_pred             eeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHH
Confidence            46899999999999841     135899999999999999999999999988877776666532    222334578999


Q ss_pred             HHHHHHHhcccCCCCC---CCHHHHhhCcCCCCCCCC
Q 032711           88 ARDFILKCLQVNPNDR---PTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        88 ~~~li~~~l~~~p~~R---ps~~~~l~~~~~~~~~~~  121 (135)
                      +.+++.+||. +|.+|   +++++++.||||+.....
T Consensus       302 ~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~  337 (412)
T 2vd5_A          302 ARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWD  337 (412)
T ss_dssp             HHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCST
T ss_pred             HHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHH
Confidence            9999999999 99888   589999999999875443

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.82  E-value=7.8e-20  Score=122.71  Aligned_cols=102  Identities=25%  Similarity=0.448  Sum_probs=86.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC---CCCCcccHHHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP---PIPDSVSRDARDFILK   94 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~li~~   94 (135)
                      ..||+.|+|||++.+.  .++.++|+||+|++++++++|..||...........+..+...   +.+..++..+.+++.+
T Consensus       167 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  244 (304)
T 2jam_A          167 ACGTPGYVAPEVLAQK--PYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICH  244 (304)
T ss_dssp             HHSCCCBCCTTTBSSC--SCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHH
T ss_pred             ccCCCCccChHHhccC--CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHH
Confidence            4689999999999764  6899999999999999999999999888877777666665432   2345678999999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      ||..||.+||++.+++.|+||......
T Consensus       245 ~l~~dp~~Rps~~~~l~h~~~~~~~~~  271 (304)
T 2jam_A          245 LLEKDPNERYTCEKALSHPWIDGNTAL  271 (304)
T ss_dssp             HHCSSTTTSCCHHHHHTSHHHHSSCSC
T ss_pred             HcCCChhHCcCHHHHhcCccccCCCcc
Confidence            999999999999999999999875543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.82  E-value=5.4e-20  Score=131.00  Aligned_cols=99  Identities=27%  Similarity=0.435  Sum_probs=86.0

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC---CCcccHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI---PDSVSRDARDFI   92 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~li   92 (135)
                      ...+||+.|+|||++..   .++.++||||+|+++|++++|..||.+....+....+..+.....   ...++..+.+++
T Consensus       196 ~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  272 (494)
T 3lij_A          196 KERLGTAYYIAPEVLRK---KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLI  272 (494)
T ss_dssp             CCCCSCTTTCCHHHHTT---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHH
T ss_pred             cccCCCcCeeCHHHHcc---cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHH
Confidence            34579999999999864   589999999999999999999999999888888877776655322   245789999999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      .+||..+|.+||++.++++||||..
T Consensus       273 ~~~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          273 KQMLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             HHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             HHHCCCChhhCccHHHHhcCccccc
Confidence            9999999999999999999999975

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.82  E-value=9.8e-20  Score=124.36  Aligned_cols=104  Identities=23%  Similarity=0.383  Sum_probs=82.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc---CCC----------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR---GEL----------------   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~---~~~----------------   77 (135)
                      ..+||+.|+|||++... ..++.++|+||+|++++++++|..||.+.+....+..+..   ...                
T Consensus       181 ~~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (353)
T 2b9h_A          181 EFVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREY  259 (353)
T ss_dssp             CCCCCGGGCCHHHHHSC-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHH
T ss_pred             hccccccccCCeeeccC-CCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHH
Confidence            35789999999998763 3689999999999999999999999988776554433321   000                


Q ss_pred             ----CC--------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           78 ----PP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        78 ----~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                          ..        ....++.++.+++.+||..||.+||++.++++||||......
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~  315 (353)
T 2b9h_A          260 IKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDP  315 (353)
T ss_dssp             HHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred             hhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCc
Confidence                00        113567889999999999999999999999999999976543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.82  E-value=5.5e-20  Score=123.33  Aligned_cols=100  Identities=29%  Similarity=0.507  Sum_probs=87.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...||+.|+|||++...  .++.++|+|++|++++++++|..||...........+........+..++..+.+++.+||
T Consensus       178 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  255 (303)
T 3a7i_A          178 TFVGTPFWMAPEVIKQS--AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACL  255 (303)
T ss_dssp             CCCSCGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHHHHHHC
T ss_pred             ccCCCcCccCHHHHhcC--CCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHHHHHHc
Confidence            45789999999999764  6889999999999999999999999888777776666666665667788999999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      ..+|.+||++.++++|+||...
T Consensus       256 ~~dp~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          256 NKEPSFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             CSSGGGSCCHHHHTTCHHHHHH
T ss_pred             CCChhhCcCHHHHhhChhhhcC
Confidence            9999999999999999999754

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.82  E-value=8.2e-20  Score=120.83  Aligned_cols=108  Identities=16%  Similarity=0.173  Sum_probs=80.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH-HHHHHHHcCC-CCCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV-QALFKIARGE-LPPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~-~~~~~i~~~~-~~~~~~~~~~~~~~li~~   94 (135)
                      ...|++.|+|||++... ..++.++|+||+|++++++++|..||...... .....+.... .......++..+.+++.+
T Consensus       166 ~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (276)
T 2yex_A          166 KMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK  244 (276)
T ss_dssp             CCCSCGGGCCGGGGTCS-SBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHH
T ss_pred             CCccccCccChHHHhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHH
Confidence            45789999999999864 23477899999999999999999999765532 2222222222 122234678899999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCCCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL  125 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~  125 (135)
                      ||..+|.+||++.++++|+||..........
T Consensus       245 ~l~~~p~~Rps~~~il~~~~~~~~~~~~~~~  275 (276)
T 2yex_A          245 ILVENPSARITIPDIKKDRWYNKPLKKGAKR  275 (276)
T ss_dssp             HSCSSTTTSCCHHHHTTCTTTTCCCC-----
T ss_pred             HCCCCchhCCCHHHHhcCccccChhhccCCC
Confidence            9999999999999999999999876554443

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.81  E-value=6.6e-20  Score=125.14  Aligned_cols=103  Identities=22%  Similarity=0.432  Sum_probs=79.8

Q ss_pred             cccccccccchhhhhcc---------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHcCC-CCCCCCccc
Q 032711           17 WHVSRWNSLTDQVVNSK---------NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WVQALFKIARGE-LPPIPDSVS   85 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---------~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~-~~~~~~~i~~~~-~~~~~~~~~   85 (135)
                      ..+||+.|+|||++...         ...++.++||||+|+++++|++|..||.... .......+.... ....+...+
T Consensus       168 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (343)
T 3dbq_A          168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE  247 (343)
T ss_dssp             --CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSC
T ss_pred             CCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCC
Confidence            45899999999999751         1357899999999999999999999997643 333444443322 234566678


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           86 RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        86 ~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      ..+.+++.+||..||.+||++.++++||||....
T Consensus       248 ~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  281 (343)
T 3dbq_A          248 KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  281 (343)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             HHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence            8999999999999999999999999999998543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.81  E-value=7.4e-20  Score=128.69  Aligned_cols=103  Identities=23%  Similarity=0.413  Sum_probs=84.6

Q ss_pred             cccccccccchhhhhc---cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC----CCCCCCCcccHHHH
Q 032711           17 WHVSRWNSLTDQVVNS---KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG----ELPPIPDSVSRDAR   89 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~---~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~----~~~~~~~~~~~~~~   89 (135)
                      ..+||+.|+|||++..   ....++.++|+||+|+++|+|++|+.||.+.+..+....+...    ..+.....++.++.
T Consensus       235 ~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~  314 (437)
T 4aw2_A          235 VAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAK  314 (437)
T ss_dssp             SCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHH
T ss_pred             cccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHH
Confidence            3689999999999972   1235899999999999999999999999998887777666432    22333355899999


Q ss_pred             HHHHHhcccCCCC--CCCHHHHhhCcCCCCCC
Q 032711           90 DFILKCLQVNPND--RPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        90 ~li~~~l~~~p~~--Rps~~~~l~~~~~~~~~  119 (135)
                      +|+.+||..+|.+  |++++++++||||++..
T Consensus       315 dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~  346 (437)
T 4aw2_A          315 DLIRRLICSREHRLGQNGIEDFKKHPFFSGID  346 (437)
T ss_dssp             HHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCC
T ss_pred             HHHHHHhcccccccCCCCHHHHhCCCccCCCC
Confidence            9999999888877  99999999999998644

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.81  E-value=5.6e-20  Score=122.63  Aligned_cols=98  Identities=18%  Similarity=0.376  Sum_probs=78.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHH-HHHHcCCCC-CCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQAL-FKIARGELP-PIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~-~~i~~~~~~-~~~~~~~~~~~~li~~   94 (135)
                      ...||+.|+|||++.+   .++.++|+||+|++++++++|..||......... ..+.....+ ..+...++.+.+++.+
T Consensus       189 ~~~~t~~y~aPE~~~~---~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  265 (290)
T 1t4h_A          189 AVIGTPEFMAPEMYEE---KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG  265 (290)
T ss_dssp             ESCSSCCCCCGGGGGT---CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHH
T ss_pred             cccCCcCcCCHHHHhc---cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHH
Confidence            3579999999998864   4899999999999999999999999875544333 333333221 2344566889999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      ||..+|.+||++.++++||||+.
T Consensus       266 ~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          266 CIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HccCChhhCCCHHHHhhCccccc
Confidence            99999999999999999999986

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.81  E-value=2.6e-19  Score=121.05  Aligned_cols=103  Identities=28%  Similarity=0.409  Sum_probs=83.7

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC------------------
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL------------------   77 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~------------------   77 (135)
                      ....||..|+|||++...  .++.++|+||+|++++++++|..||.+......+..+.....                  
T Consensus       177 ~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  254 (326)
T 1blx_A          177 TSVVVTLWYRAPEVLLQS--SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF  254 (326)
T ss_dssp             CCCCCCCTTCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGS
T ss_pred             cccccccceeCHHHHhcC--CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhh
Confidence            346789999999999874  689999999999999999999999998877666555432100                  


Q ss_pred             --------CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           78 --------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        78 --------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                              ......++..+.+++.+||..+|.+||++.+++.|+||.....
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~  305 (326)
T 1blx_A          255 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER  305 (326)
T ss_dssp             CCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             cccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence                    0122457888999999999999999999999999999987543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.81  E-value=5.4e-20  Score=121.93  Aligned_cols=100  Identities=26%  Similarity=0.369  Sum_probs=85.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCC---CcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIP---DSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~li~   93 (135)
                      ...||+.|+|||++.+   .++.++|+||+|++++++++|..||...+..+....+..+......   ..++..+.+++.
T Consensus       167 ~~~~t~~y~aPE~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  243 (277)
T 3f3z_A          167 TKVGTPYYVSPQVLEG---LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIR  243 (277)
T ss_dssp             CCCSCTTTCCHHHHTT---CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHH
T ss_pred             ccCCCCCccChHHhcc---cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHH
Confidence            4579999999999865   4899999999999999999999999988887777777666542221   257889999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      +||..+|.+||++.++++|+||....
T Consensus       244 ~~l~~dp~~R~s~~~~l~h~~~~~~~  269 (277)
T 3f3z_A          244 RLLTKSPKQRITSLQALEHEWFEKQL  269 (277)
T ss_dssp             HHTCSSTTTSCCHHHHTTSHHHHHHH
T ss_pred             HHccCChhhCcCHHHHhcCHHHhccc
Confidence            99999999999999999999998643

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.81  E-value=6.7e-20  Score=130.82  Aligned_cols=103  Identities=19%  Similarity=0.293  Sum_probs=88.4

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC---CCcccHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI---PDSVSRDARDFI   92 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~li   92 (135)
                      ...+||+.|+|||++..   .++.++||||+|+++|++++|..||.+.+..+.+..+..+.....   ...++.++.+++
T Consensus       206 ~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  282 (504)
T 3q5i_A          206 RDRLGTAYYIAPEVLKK---KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELI  282 (504)
T ss_dssp             CCCCSCTTTCCHHHHTT---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHH
T ss_pred             ccccCCcCCCCHHHhcc---CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHH
Confidence            34689999999999864   589999999999999999999999999888888888877655221   245789999999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      .+||..+|.+||++++++.||||+.....
T Consensus       283 ~~~L~~dp~~R~t~~e~l~h~~~~~~~~~  311 (504)
T 3q5i_A          283 KLMLTYDYNKRCTAEEALNSRWIKKYANN  311 (504)
T ss_dssp             HHHTCSSTTTSCCHHHHHTSHHHHHTCCC
T ss_pred             HHHcCCChhHCCCHHHHhcCHhhhhchhc
Confidence            99999999999999999999999875543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.81  E-value=4.4e-20  Score=125.29  Aligned_cols=103  Identities=25%  Similarity=0.419  Sum_probs=67.2

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH-------HHHHHHHHcCCCCCCC---Cccc
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-------VQALFKIARGELPPIP---DSVS   85 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~-------~~~~~~i~~~~~~~~~---~~~~   85 (135)
                      ...+||+.|+|||++...  .++.++|+||+|++++++++|..||.+.+.       .+....+..+......   ..++
T Consensus       167 ~~~~~t~~y~aPE~~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s  244 (325)
T 3kn6_A          167 KTPCFTLHYAAPELLNQN--GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVS  244 (325)
T ss_dssp             -----------------C--CCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSC
T ss_pred             cccCCCcCccCHHHhcCC--CCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCC
Confidence            345789999999999774  689999999999999999999999976432       3445555555442211   2468


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           86 RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        86 ~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      .++.+++.+||..||.+||++++++.|+||.....
T Consensus       245 ~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~  279 (325)
T 3kn6_A          245 QEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ  279 (325)
T ss_dssp             HHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCC
T ss_pred             HHHHHHHHHHCCCChhHCCCHHHHhcChhhccCcc
Confidence            89999999999999999999999999999987544

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.81  E-value=5.2e-20  Score=126.88  Aligned_cols=103  Identities=25%  Similarity=0.278  Sum_probs=80.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-------------------   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-------------------   77 (135)
                      ..+||..|+|||++.+. ..++.++||||+|+++++|++|+.||.+.+....+..+.....                   
T Consensus       188 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~  266 (367)
T 2fst_X          188 GYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYI  266 (367)
T ss_dssp             ---CCCTTCCHHHHTTC-CSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHH
T ss_pred             CcCcCcCccChHHHcCC-cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHH
Confidence            45899999999999864 3689999999999999999999999998877665554432100                   


Q ss_pred             ---CC--------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           78 ---PP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        78 ---~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                         ..        .....+..+.+|+.+||..||.+||++.+++.||||.....
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~  320 (367)
T 2fst_X          267 QSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  320 (367)
T ss_dssp             HTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             hccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccC
Confidence               00        01245788999999999999999999999999999997544

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.81  E-value=3.1e-19  Score=119.52  Aligned_cols=103  Identities=37%  Similarity=0.550  Sum_probs=83.5

Q ss_pred             cccccccccchhhhhc---cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNS---KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARDF   91 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~---~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~l   91 (135)
                      ...||..|+|||++..   ....++.++|+|++|++++++++|..||...+.......+......  ..+..++..+.++
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  255 (302)
T 2j7t_A          176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDF  255 (302)
T ss_dssp             ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHH
T ss_pred             cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHH
Confidence            4579999999999852   1236789999999999999999999999988877666666555432  2345678899999


Q ss_pred             HHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           92 ILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      +.+||..+|.+||++.++++||||....
T Consensus       256 i~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          256 LKIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             HHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             HHHHcccChhhCCCHHHHhcChHHhhhc
Confidence            9999999999999999999999998744

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.81  E-value=9.3e-20  Score=124.24  Aligned_cols=102  Identities=24%  Similarity=0.410  Sum_probs=79.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc--CCCC----------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR--GELP----------------   78 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~--~~~~----------------   78 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++++|++|..||...+.......+..  +..+                
T Consensus       198 ~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  275 (355)
T 2eu9_A          198 TIVATRHYRPPEVILEL--GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKG  275 (355)
T ss_dssp             SSCSCGGGCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETT
T ss_pred             CCcCCCcccCCeeeecC--CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhccc
Confidence            45899999999999864  689999999999999999999999988776544433221  1100                


Q ss_pred             -------------------------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           79 -------------------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        79 -------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                                               ......+..+.+++.+||..||.+||++.++++||||....+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  342 (355)
T 2eu9_A          276 GLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTP  342 (355)
T ss_dssp             EECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCH
T ss_pred             ccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCCh
Confidence                                     001122457889999999999999999999999999997654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.81  E-value=1.4e-19  Score=124.38  Aligned_cols=103  Identities=22%  Similarity=0.328  Sum_probs=74.8

Q ss_pred             hcccccccccchhhhhccCCCCCc-hhhHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHcCCC-CCCCCcccHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGL-PADIWSVGCTVLEMLTRCRPYFGVEW----VQALFKIARGEL-PPIPDSVSRDAR   89 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~-~~dvws~G~~l~~l~~g~~p~~~~~~----~~~~~~i~~~~~-~~~~~~~~~~~~   89 (135)
                      ...+||+.|+|||++.+.  .+.. ++||||+|+++|+|++|+.||.+...    ......+..... .+....++..+.
T Consensus       175 ~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  252 (361)
T 3uc3_A          175 KSTVGTPAYIAPEVLLRQ--EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECC  252 (361)
T ss_dssp             ------CTTSCHHHHHCS--SCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHH
T ss_pred             CCCcCCCCcCChhhhcCC--CCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHH
Confidence            345799999999999875  4544 48999999999999999999976433    334444444333 223345789999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           90 DFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      +++.+||..+|.+||++.++++||||....+
T Consensus       253 ~li~~~L~~dP~~Rps~~ell~hp~f~~~~~  283 (361)
T 3uc3_A          253 HLISRIFVADPATRISIPEIKTHSWFLKNLP  283 (361)
T ss_dssp             HHHHHHSCSCTTTSCCHHHHHTSHHHHTTCC
T ss_pred             HHHHHHccCChhHCcCHHHHHhCcchhcCCc
Confidence            9999999999999999999999999976544

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.81  E-value=7.1e-20  Score=121.20  Aligned_cols=102  Identities=26%  Similarity=0.404  Sum_probs=79.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...|++.|+|||++.+. ...+.++|+|++|++++++++|..||...+.......+..... ..+..++..+.+++.+||
T Consensus       169 ~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l  246 (276)
T 2h6d_A          169 TSCGSPNYAAPEVISGR-LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVF-YIPEYLNRSVATLLMHML  246 (276)
T ss_dssp             --------CCTGGGTTS-CCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHT
T ss_pred             cccCCccccCHHHHcCC-CCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc-cCchhcCHHHHHHHHHHc
Confidence            35789999999999874 2336899999999999999999999988877666666655543 456678899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      ..+|.+||++.++++|+||....+
T Consensus       247 ~~~p~~Rps~~~~l~h~~~~~~~~  270 (276)
T 2h6d_A          247 QVDPLKRATIKDIREHEWFKQDLP  270 (276)
T ss_dssp             CSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred             cCChhhCCCHHHHHhChhhccCch
Confidence            999999999999999999987543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.81  E-value=1.1e-19  Score=123.73  Aligned_cols=100  Identities=26%  Similarity=0.489  Sum_probs=86.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...||+.|+|||++.+.  .++.++|+|++|+++++|++|..||......+....+..... ..+..++..+.+++.+||
T Consensus       200 ~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l  276 (335)
T 2owb_A          200 VLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY-SIPKHINPVAASLIQKML  276 (335)
T ss_dssp             CCCSCCSSCCHHHHHTS--CBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC-CCCTTSCHHHHHHHHHHT
T ss_pred             ccCCCccccCHHHhccC--CCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCC-CCCccCCHHHHHHHHHHc
Confidence            35789999999999875  688999999999999999999999988877766666655544 456678899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      ..||.+||++.++++|+||....
T Consensus       277 ~~dp~~Rps~~ell~~~~~~~~~  299 (335)
T 2owb_A          277 QTDPTARPTINELLNDEFFTSGY  299 (335)
T ss_dssp             CSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             cCChhHCcCHHHHhcCccccCCC
Confidence            99999999999999999998643

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.81  E-value=7e-20  Score=127.50  Aligned_cols=102  Identities=21%  Similarity=0.382  Sum_probs=76.6

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH----HHHHHHHcCCCC---CCCCcccHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV----QALFKIARGELP---PIPDSVSRDA   88 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~----~~~~~i~~~~~~---~~~~~~~~~~   88 (135)
                      .+.+||+.|+|||++...  .++.++||||+|+++|+|++|..||.+.+..    .....+..+...   .....++.++
T Consensus       221 ~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  298 (400)
T 1nxk_A          221 TTPCYTPYYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV  298 (400)
T ss_dssp             ------CTTCCGGGSCCC--CSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred             ccCCCCCCccCHhhcCCC--CCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHH
Confidence            356889999999999764  6899999999999999999999999764321    122333333331   1224678999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           89 RDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        89 ~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      .+|+.+||..||.+||++.+++.|+||....
T Consensus       299 ~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          299 KMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             HHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence            9999999999999999999999999998643

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.81  E-value=1.7e-19  Score=125.01  Aligned_cols=102  Identities=21%  Similarity=0.386  Sum_probs=82.5

Q ss_pred             hcccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCc---HHHHHHHHHcCCCCCCCCcccHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WVQALFKIARGELPPIPDSVSRDARDF   91 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~l   91 (135)
                      ...+||+.|+|||++... +..++.++|+||+|+++|+|++|..||....   .......+... ....+..++..+.++
T Consensus       172 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~-~~~~p~~~s~~~~~l  250 (384)
T 4fr4_A          172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT-VVTYPSAWSQEMVSL  250 (384)
T ss_dssp             CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHC-CCCCCTTSCHHHHHH
T ss_pred             eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhc-ccCCCCcCCHHHHHH
Confidence            457899999999999753 2358899999999999999999999997432   23333333333 335677889999999


Q ss_pred             HHHhcccCCCCCCC-HHHHhhCcCCCCC
Q 032711           92 ILKCLQVNPNDRPT-AAQLMEHPFVKRP  118 (135)
Q Consensus        92 i~~~l~~~p~~Rps-~~~~l~~~~~~~~  118 (135)
                      +.+||..+|.+|++ +++++.||||...
T Consensus       251 i~~lL~~dP~~R~s~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          251 LKKLLEPNPDQRFSQLSDVQNFPYMNDI  278 (384)
T ss_dssp             HHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred             HHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence            99999999999998 8999999999864

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.81  E-value=1.4e-19  Score=122.63  Aligned_cols=100  Identities=26%  Similarity=0.401  Sum_probs=78.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc--CCC-----------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR--GEL-----------------   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~--~~~-----------------   77 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|++++++++|..||...+..+....+..  +..                 
T Consensus       193 ~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  270 (339)
T 1z57_A          193 TLVSTRHYRAPEVILAL--GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHD  270 (339)
T ss_dssp             SSCSCGGGCCHHHHTTS--CCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETT
T ss_pred             cccCCccccChHHhhCC--CCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhc
Confidence            45789999999999874  689999999999999999999999988766544433211  100                 


Q ss_pred             ------------------------CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           78 ------------------------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        78 ------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                                              .......+..+.+++.+||..||.+||++.++++||||...
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          271 RLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             EECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             cccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence                                    00112235678899999999999999999999999999864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.81  E-value=1.5e-19  Score=120.80  Aligned_cols=100  Identities=26%  Similarity=0.489  Sum_probs=86.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...||+.|+|||++...  .++.++|+|++|++++++++|..||......+....+..... ..+..++..+.+++.+||
T Consensus       174 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l  250 (294)
T 2rku_A          174 VLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY-SIPKHINPVAASLIQKML  250 (294)
T ss_dssp             CCCSCCSSCCHHHHTTS--CBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC-CCCTTSCHHHHHHHHHHT
T ss_pred             cccCCCCcCCcchhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccC-CCccccCHHHHHHHHHHc
Confidence            35789999999999764  578999999999999999999999988877766666655543 556778899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      ..+|.+||++.+++.|+||....
T Consensus       251 ~~~p~~Rps~~~ll~~~~~~~~~  273 (294)
T 2rku_A          251 QTDPTARPTINELLNDEFFTSGY  273 (294)
T ss_dssp             CSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             ccChhhCcCHHHHhhChheecCC
Confidence            99999999999999999998644

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.81  E-value=8.9e-20  Score=121.42  Aligned_cols=101  Identities=29%  Similarity=0.464  Sum_probs=78.4

Q ss_pred             ccccccccchhhhhc--cCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHHHcCCC-CCCCCcccHHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNS--KNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIARGEL-PPIPDSVSRDARDFIL   93 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~--~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~-~~~~~~~~i~~~~~-~~~~~~~~~~~~~li~   93 (135)
                      ..||+.|+|||++..  ....++.++|+||+|++++++++|..||... .............. ......++.++.+++.
T Consensus       169 ~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  248 (290)
T 3fme_A          169 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS  248 (290)
T ss_dssp             -CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHH
T ss_pred             cCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHH
Confidence            479999999999732  1236889999999999999999999999763 33344444333333 2334568899999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      +||..+|.+||++.++++||||...
T Consensus       249 ~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          249 QCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             HHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHhhcChhhCcCHHHHHhCcccccC
Confidence            9999999999999999999999753

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.81  E-value=2.9e-19  Score=125.41  Aligned_cols=106  Identities=27%  Similarity=0.366  Sum_probs=74.8

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhC-----------CCCCCCCc-----------------HHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-----------CRPYFGVE-----------------WVQ   67 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g-----------~~p~~~~~-----------------~~~   67 (135)
                      ...+||+.|+|||++... ..++.++||||+||++++|++|           .++|.+.+                 ...
T Consensus       209 ~~~~gt~~Y~APE~~~~~-~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~  287 (432)
T 3n9x_A          209 TSHVVTRWYRAPELILLQ-ENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRD  287 (432)
T ss_dssp             --CCCCCTTCCHHHHTTC-SCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHH
T ss_pred             cCCCCCccccCHHHHhcC-CCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHH
Confidence            567899999999998654 3689999999999999999974           34443321                 111


Q ss_pred             HHHHHHc------------------------CCC-CCC-----CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           68 ALFKIAR------------------------GEL-PPI-----PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        68 ~~~~i~~------------------------~~~-~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      ++..+..                        ... ...     ....+.++.+|+.+||..||.+||+++++++||||..
T Consensus       288 ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  367 (432)
T 3n9x_A          288 QLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD  367 (432)
T ss_dssp             HHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTT
T ss_pred             HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhh
Confidence            2111110                        000 000     1347889999999999999999999999999999997


Q ss_pred             CCCCC
Q 032711          118 PLPTS  122 (135)
Q Consensus       118 ~~~~~  122 (135)
                      .....
T Consensus       368 ~~~~~  372 (432)
T 3n9x_A          368 VRKKK  372 (432)
T ss_dssp             TCCTT
T ss_pred             ccCcc
Confidence            65433

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.80  E-value=2.5e-19  Score=126.41  Aligned_cols=104  Identities=28%  Similarity=0.389  Sum_probs=72.3

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-----------CCCCCCCCcH-------------------
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-----------RCRPYFGVEW-------------------   65 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-----------g~~p~~~~~~-------------------   65 (135)
                      ...+||+.|+|||++... ..++.++||||+||++|+|++           |+++|.+.+.                   
T Consensus       241 ~~~~gt~~Y~aPE~~~~~-~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~  319 (458)
T 3rp9_A          241 TGHVVTRWYRAPELILLQ-ENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRG  319 (458)
T ss_dssp             ----CCCTTCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHH
T ss_pred             cCCcccccccChHHhhCC-CCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccC
Confidence            346889999999988653 368999999999999999998           5666654321                   


Q ss_pred             -HHHHHHHHc--C--------------------CCC--------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcC
Q 032711           66 -VQALFKIAR--G--------------------ELP--------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF  114 (135)
Q Consensus        66 -~~~~~~i~~--~--------------------~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~  114 (135)
                       .+.+..+..  +                    ..+        ......+.++.+|+.+||..||.+|++++++++|||
T Consensus       320 ~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~  399 (458)
T 3rp9_A          320 NRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPF  399 (458)
T ss_dssp             HHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             CHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHh
Confidence             112211110  0                    000        011345789999999999999999999999999999


Q ss_pred             CCCCCC
Q 032711          115 VKRPLP  120 (135)
Q Consensus       115 ~~~~~~  120 (135)
                      |.....
T Consensus       400 f~~~~~  405 (458)
T 3rp9_A          400 FKEVRI  405 (458)
T ss_dssp             GTTTCC
T ss_pred             hhhcCC
Confidence            997644

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.80  E-value=1.1e-19  Score=121.58  Aligned_cols=104  Identities=30%  Similarity=0.512  Sum_probs=77.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC---------CCCcccHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP---------IPDSVSRD   87 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~   87 (135)
                      ...||+.|+|||++... ..++.++|+|++|++++++++|..||...................         ....++..
T Consensus       185 ~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (303)
T 2vwi_A          185 TFVGTPCWMAPEVMEQV-RGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKS  263 (303)
T ss_dssp             ---CCCTTCCHHHHHHH-HCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHH
T ss_pred             ccCCCccccCHHHhccc-cCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHH
Confidence            45799999999998753 257899999999999999999999998766544443333322211         22456789


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           88 ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        88 ~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      +.+++.+||..||.+||++.++++|+||......
T Consensus       264 ~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~  297 (303)
T 2vwi_A          264 FRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNK  297 (303)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHHTSTTC------
T ss_pred             HHHHHHHHccCChhhCcCHHHHhhChhhhcCCCC
Confidence            9999999999999999999999999999875543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.80  E-value=5.6e-20  Score=127.08  Aligned_cols=111  Identities=27%  Similarity=0.434  Sum_probs=79.9

Q ss_pred             hhhhhhhhhhh----hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHHHc
Q 032711            5 TVEGLGNALRR----KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE------WVQALFKIAR   74 (135)
Q Consensus         5 ~~~~~~~~~~~----~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~------~~~~~~~i~~   74 (135)
                      ++.++|.....    ...+||+.|+|||++.+.  .++.++||||+|+++|+|++|..||...+      ....+..+..
T Consensus       236 kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~  313 (397)
T 1wak_A          236 KIADLGNACWVHKHFTEDIQTRQYRSLEVLIGS--GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIE  313 (397)
T ss_dssp             EECCGGGCEETTBCSCSCCSCGGGCCHHHHHTS--CCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHH
T ss_pred             EeccccccccccccCccCCCCCcccCChhhcCC--CCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHH
Confidence            34555544322    345789999999999875  68999999999999999999999996533      2222222211


Q ss_pred             --CCCC---------------------------------------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCc
Q 032711           75 --GELP---------------------------------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHP  113 (135)
Q Consensus        75 --~~~~---------------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~  113 (135)
                        +..+                                       ..+...+..+.+|+.+||..||.+||++.++++||
T Consensus       314 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  393 (397)
T 1wak_A          314 LLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP  393 (397)
T ss_dssp             HHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSG
T ss_pred             hcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCc
Confidence              1000                                       01223346788999999999999999999999999


Q ss_pred             CCCC
Q 032711          114 FVKR  117 (135)
Q Consensus       114 ~~~~  117 (135)
                      ||+.
T Consensus       394 ~~~~  397 (397)
T 1wak_A          394 WLNS  397 (397)
T ss_dssp             GGGC
T ss_pred             cccC
Confidence            9963

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.80  E-value=5.7e-20  Score=123.95  Aligned_cols=95  Identities=24%  Similarity=0.408  Sum_probs=76.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC-CCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-PIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~li~~~   95 (135)
                      ...||+.|+|||++.+   .++.++||||+|++++++++|..++.+...   ...+...... ..+..++.++.+++.+|
T Consensus       215 ~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~~  288 (311)
T 3p1a_A          215 VQEGDPRYMAPELLQG---SYGTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQGYLPPEFTAGLSSELRSVLVMM  288 (311)
T ss_dssp             CCCCCGGGCCGGGGGT---CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---HHHHTTTCCCHHHHTTSCHHHHHHHHHH
T ss_pred             ccCCCccccCHhHhcC---CCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHhccCCCcccccCCCHHHHHHHHHH
Confidence            4579999999999875   589999999999999999999777655432   2223322221 22356789999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      |..+|.+||++.++++||||+.
T Consensus       289 L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          289 LEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             SCSSTTTSCCHHHHHTSGGGSC
T ss_pred             cCCChhhCcCHHHHHhCccccC
Confidence            9999999999999999999986

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.80  E-value=2e-19  Score=119.36  Aligned_cols=97  Identities=21%  Similarity=0.285  Sum_probs=79.0

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      ..||..|+|||++... ..++.++||||+|++++++++|.+++....   ....+.....+..+..++..+.+++.+||.
T Consensus       190 ~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  265 (289)
T 1x8b_A          190 EEGDSRFLANEVLQEN-YTHLPKADIFALALTVVCAAGAEPLPRNGD---QWHEIRQGRLPRIPQVLSQEFTELLKVMIH  265 (289)
T ss_dssp             CCCCGGGCCHHHHTTC-CTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HHHHHHTTCCCCCSSCCCHHHHHHHHHHTC
T ss_pred             cCCCccccChhHhcCC-CCCCchhhHHHHHHHHHHHhcCCCCCcchh---HHHHHHcCCCCCCCcccCHHHHHHHHHHhC
Confidence            4689999999999864 356789999999999999999987765543   233445555566777889999999999999


Q ss_pred             cCCCCCCCHHHHhhCcCCCCC
Q 032711           98 VNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        98 ~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      .||.+||++.++++||||...
T Consensus       266 ~dp~~Rps~~~ll~h~~~~~~  286 (289)
T 1x8b_A          266 PDPERRPSAMALVKHSVLLSA  286 (289)
T ss_dssp             SSGGGSCCHHHHHTCTTC---
T ss_pred             CCcccCCCHHHHhhChHhhhh
Confidence            999999999999999999874

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.80  E-value=3e-20  Score=123.19  Aligned_cols=100  Identities=26%  Similarity=0.475  Sum_probs=60.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...||+.|+|||++.+.  .++.++|+|++|++++++++|..||...........+.... ...+..++.++.+++.+||
T Consensus       171 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l  247 (278)
T 3cok_A          171 TLCGTPNYISPEIATRS--AHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLAD-YEMPSFLSIEAKDLIHQLL  247 (278)
T ss_dssp             -----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSC-CCCCTTSCHHHHHHHHHHS
T ss_pred             eccCCCCcCCcchhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcc-cCCccccCHHHHHHHHHHc
Confidence            45789999999999764  57889999999999999999999997755433333332222 2446678899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      ..||.+||++.++++||||....
T Consensus       248 ~~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          248 RRNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             CSSGGGSCCHHHHTTSTTTC---
T ss_pred             ccCHhhCCCHHHHhcCccccCCC
Confidence            99999999999999999998643

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.80  E-value=1.7e-19  Score=129.73  Aligned_cols=99  Identities=19%  Similarity=0.312  Sum_probs=82.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHHHcCCCCCCCCcccHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WVQALFKIARGELPPIPDSVSRDARDFI   92 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~li   92 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+    .......+..... ..+..++..+.+++
T Consensus       348 ~~~GT~~Y~APE~l~~~--~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li  424 (543)
T 3c4z_A          348 GYAGTPGFMAPELLLGE--EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV-TYPDKFSPASKDFC  424 (543)
T ss_dssp             CCCSCTTTSCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCC-CCCTTSCHHHHHHH
T ss_pred             cccCCccccChhhhcCC--CCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhccc-CCCcccCHHHHHHH
Confidence            45899999999999874  68999999999999999999999997642    3344444544433 56678899999999


Q ss_pred             HHhcccCCCCCCC-----HHHHhhCcCCCCC
Q 032711           93 LKCLQVNPNDRPT-----AAQLMEHPFVKRP  118 (135)
Q Consensus        93 ~~~l~~~p~~Rps-----~~~~l~~~~~~~~  118 (135)
                      .+||..+|.+|++     +.+++.||||+..
T Consensus       425 ~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          425 EALLQKDPEKRLGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             HHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred             HHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence            9999999999996     4789999999963

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.80  E-value=2.5e-19  Score=119.56  Aligned_cols=104  Identities=34%  Similarity=0.630  Sum_probs=81.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH-HHHHH-HHcCCCCCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV-QALFK-IARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~-~~~~~-i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ...|++.|+|||++......++.++|+|++|++++++++|..||...... ..... .........+..++..+.+++.+
T Consensus       182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  261 (295)
T 2clq_A          182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK  261 (295)
T ss_dssp             CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHH
T ss_pred             ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHH
Confidence            45789999999999764224789999999999999999999999654322 22222 22233345677789999999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      ||..+|.+||++.+++.|+||.....
T Consensus       262 ~l~~dp~~Rps~~~ll~~~~~~~~~~  287 (295)
T 2clq_A          262 CFEPDPDKRACANDLLVDEFLKVSSK  287 (295)
T ss_dssp             TTCSSTTTSCCHHHHHTSGGGCC---
T ss_pred             HccCChhhCCCHHHHhcChhhhhccc
Confidence            99999999999999999999987543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.80  E-value=2.5e-19  Score=120.60  Aligned_cols=101  Identities=34%  Similarity=0.568  Sum_probs=84.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li~~   94 (135)
                      ...|++.|+|||++...  .++.++|+|++|++++++++|..||...+.......+......  ..+..++..+.+++.+
T Consensus       184 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  261 (314)
T 3com_A          184 TVIGTPFWMAPEVIQEI--GYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQ  261 (314)
T ss_dssp             CCCSCGGGCCHHHHSSS--CBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHH
T ss_pred             ccCCCCCccChhhcCCC--CCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHH
Confidence            45789999999999774  6899999999999999999999999887776655555444332  2345578899999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      ||..+|.+||++.+++.|+||....
T Consensus       262 ~l~~dp~~Rpt~~~ll~~~~~~~~~  286 (314)
T 3com_A          262 CLVKSPEQRATATQLLQHPFVRSAK  286 (314)
T ss_dssp             HTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred             HccCChhhCcCHHHHHhCHHHhcCC
Confidence            9999999999999999999998754

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=5.9e-19  Score=121.05  Aligned_cols=102  Identities=25%  Similarity=0.419  Sum_probs=80.4

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHHHcCCCCCCCCcccHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WVQALFKIARGELPPIPDSVSRDARDF   91 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~l   91 (135)
                      ...+||+.|+|||++.+....++.++||||+|+++|+|++|..||....    .......+.... ...+..++..+.++
T Consensus       218 ~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l  296 (355)
T 1vzo_A          218 YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE-PPYPQEMSALAKDL  296 (355)
T ss_dssp             CGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC-CCCCTTSCHHHHHH
T ss_pred             cCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccC-CCCCcccCHHHHHH
Confidence            3468999999999998643357899999999999999999999996432    233333333332 35667788999999


Q ss_pred             HHHhcccCCCCCC-----CHHHHhhCcCCCCC
Q 032711           92 ILKCLQVNPNDRP-----TAAQLMEHPFVKRP  118 (135)
Q Consensus        92 i~~~l~~~p~~Rp-----s~~~~l~~~~~~~~  118 (135)
                      +.+||..||.+||     ++.++++|+||...
T Consensus       297 i~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          297 IQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             HHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             HHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence            9999999999999     99999999999864

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.80  E-value=4.2e-19  Score=118.64  Aligned_cols=106  Identities=24%  Similarity=0.406  Sum_probs=85.0

Q ss_pred             cccccccccchhhhhcc----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC---CCCcccHHHH
Q 032711           17 WHVSRWNSLTDQVVNSK----NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP---IPDSVSRDAR   89 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~----~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~   89 (135)
                      ...|++.|+|||++...    ...++.++|+|++|++++++++|..||...+.......+.......   ....++..+.
T Consensus       182 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  261 (298)
T 1phk_A          182 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK  261 (298)
T ss_dssp             CCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHH
T ss_pred             cccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHH
Confidence            45789999999998631    2357889999999999999999999998887776666665554421   1245788999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCC
Q 032711           90 DFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS  122 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~  122 (135)
                      +++.+||..+|.+||++.++++|+||.......
T Consensus       262 ~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~  294 (298)
T 1phk_A          262 DLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEE  294 (298)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHTTSGGGCTTC---
T ss_pred             HHHHHHccCCcccCCCHHHHHhChHhhhccchh
Confidence            999999999999999999999999999765543

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.80  E-value=9.8e-20  Score=131.54  Aligned_cols=100  Identities=23%  Similarity=0.391  Sum_probs=82.5

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHHHcCCCCCCCCcccHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WVQALFKIARGELPPIPDSVSRDARDF   91 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~l   91 (135)
                      ...+||+.|+|||++.+.  .++.++|+||+|+++|+|++|..||.+.+    .......+... ....+..++.++.++
T Consensus       343 ~~~~GT~~Y~APEvl~~~--~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~-~~~~p~~~s~~~~dL  419 (576)
T 2acx_A          343 KGRVGTVGYMAPEVVKNE--RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-PEEYSERFSPQARSL  419 (576)
T ss_dssp             ECCCSCGGGCCHHHHTTC--EESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC-CCCCCTTSCHHHHHH
T ss_pred             cccCCCccccCHHHHcCC--CCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc-cccCCccCCHHHHHH
Confidence            346899999999999874  68999999999999999999999997653    23333334333 235567789999999


Q ss_pred             HHHhcccCCCCCC-----CHHHHhhCcCCCCC
Q 032711           92 ILKCLQVNPNDRP-----TAAQLMEHPFVKRP  118 (135)
Q Consensus        92 i~~~l~~~p~~Rp-----s~~~~l~~~~~~~~  118 (135)
                      +.+||..||.+|+     ++.++++||||+..
T Consensus       420 I~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i  451 (576)
T 2acx_A          420 CSQLLCKDPAERLGCRGGSAREVKEHPLFKKL  451 (576)
T ss_dssp             HHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred             HHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence            9999999999999     78999999999863

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.80  E-value=2.5e-19  Score=121.19  Aligned_cols=102  Identities=29%  Similarity=0.543  Sum_probs=81.3

Q ss_pred             cccccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC-CCCcccHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP-IPDSVSRDARDFI   92 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~li   92 (135)
                      ...||+.|+|||++...   ...++.++|+|++|++++++++|..||...+.......+.....+. ....++..+.+++
T Consensus       188 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  267 (326)
T 2x7f_A          188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFI  267 (326)
T ss_dssp             ---CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHH
T ss_pred             cccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHHH
Confidence            45789999999998731   1357899999999999999999999998887766666665544332 3456789999999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      .+||..+|.+||++.++++||||...
T Consensus       268 ~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          268 ESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             HHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             HHHhccChhhCCCHHHHhhChHHhhC
Confidence            99999999999999999999999864

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.80  E-value=1.2e-19  Score=122.20  Aligned_cols=101  Identities=25%  Similarity=0.372  Sum_probs=81.1

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC-------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-------------------   78 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~-------------------   78 (135)
                      ..|+..|+|||++... ..++.++|+||+|++++++++|..||.+.+..+....+......                   
T Consensus       184 ~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (320)
T 2i6l_A          184 GLVTKWYRSPRLLLSP-NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRN  262 (320)
T ss_dssp             GGSCCTTCCHHHHHCT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHH
T ss_pred             ccccccccCcHHhcCc-ccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccc
Confidence            4678899999998764 36899999999999999999999999887766555444322110                   


Q ss_pred             ----------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           79 ----------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        79 ----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                                .....++.++.+++.+||..||.+||++.++++||||+...
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          263 DMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS  313 (320)
T ss_dssp             HTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred             cccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence                      01235788999999999999999999999999999998643

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.80  E-value=6.1e-20  Score=124.66  Aligned_cols=101  Identities=27%  Similarity=0.465  Sum_probs=80.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC--C------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG--E------------------   76 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~--~------------------   76 (135)
                      ...||..|+|||++.+. ..++.++|+||+|++++++++|..||.+....+....+...  .                  
T Consensus       183 ~~~~t~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (331)
T 4aaa_A          183 DEVATRWYRAPELLVGD-VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV  261 (331)
T ss_dssp             -CCCCCTTCCHHHHTTC-TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTC
T ss_pred             CCcCCccccCcccccCC-CCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccc
Confidence            45789999999999764 36799999999999999999999999887766555443211  0                  


Q ss_pred             -CCC---------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           77 -LPP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        77 -~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                       .+.         ....++..+.+++.+||..||.+||++.++++||||...
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          262 RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             CCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred             cCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence             000         012467889999999999999999999999999999763

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.79  E-value=9.6e-20  Score=127.46  Aligned_cols=102  Identities=25%  Similarity=0.355  Sum_probs=74.7

Q ss_pred             hcccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH-HHHHHHHcCCCCCC---CCcccHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV-QALFKIARGELPPI---PDSVSRDARD   90 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~-~~~~~i~~~~~~~~---~~~~~~~~~~   90 (135)
                      ...+||+.|+|||++... ...++.++|+||+|+++++|++|..||...... .....+..+.....   ...++..+.+
T Consensus       299 ~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  378 (419)
T 3i6u_A          299 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD  378 (419)
T ss_dssp             ------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHH
T ss_pred             cccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHH
Confidence            356899999999998641 236788999999999999999999999764432 22233333333222   2457889999


Q ss_pred             HHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           91 FILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        91 li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      ++.+||..+|.+||++.++++||||..
T Consensus       379 li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          379 LVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HHHHHccCChhHCcCHHHHhCCcccCC
Confidence            999999999999999999999999975

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.79  E-value=4.1e-19  Score=121.75  Aligned_cols=103  Identities=27%  Similarity=0.413  Sum_probs=79.0

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHH--------------------------
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQAL--------------------------   69 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~--------------------------   69 (135)
                      ....||+.|+|||++.+.  .++.++||||+|+++++|++|..||...+.....                          
T Consensus       188 ~~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (360)
T 3eqc_A          188 NSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN  265 (360)
T ss_dssp             ---CCCCTTCCHHHHTTC--CCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------------
T ss_pred             cCCCCCCCeECHHHHcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccc
Confidence            346899999999999874  6899999999999999999999999765543221                          


Q ss_pred             ----------------HHHHcCCCCCC-CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           70 ----------------FKIARGELPPI-PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        70 ----------------~~i~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                                      ..+........ ...++.++.+++.+||..||.+||++.++++||||+....
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  333 (360)
T 3eqc_A          266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA  333 (360)
T ss_dssp             --------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred             ccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchH
Confidence                            11222222222 2346889999999999999999999999999999986443

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.79  E-value=3.7e-19  Score=121.22  Aligned_cols=95  Identities=21%  Similarity=0.327  Sum_probs=77.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++.+. ..++.++||||+|+++|++++|..||.....      .. ......+..++.++.+++.+||
T Consensus       188 ~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~-~~~~~~~~~~~~~l~~li~~~L  259 (335)
T 3dls_A          188 TFCGTIEYCAPEVLMGN-PYRGPELEMWSLGVTLYTLVFEENPFCELEE------TV-EAAIHPPYLVSKELMSLVSGLL  259 (335)
T ss_dssp             EECSCGGGCCHHHHTTC-CBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GT-TTCCCCSSCCCHHHHHHHHHHT
T ss_pred             ccCCCccccChhhhcCC-CCCCCcccchhHHHHHHHHHhCCCchhhHHH------HH-hhccCCCcccCHHHHHHHHHHc
Confidence            45799999999999875 2348899999999999999999999976432      11 1122445668899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      ..+|.+||++.++++||||....
T Consensus       260 ~~dP~~Rps~~ell~hp~~~~~~  282 (335)
T 3dls_A          260 QPVPERRTTLEKLVTDPWVTQPV  282 (335)
T ss_dssp             CSSGGGSCCHHHHHHCTTTTCCC
T ss_pred             cCChhhCcCHHHHhcCccccCCc
Confidence            99999999999999999998643

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.79  E-value=2.3e-19  Score=119.55  Aligned_cols=100  Identities=26%  Similarity=0.468  Sum_probs=84.3

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC---CCCcccHHHHHHHHH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP---IPDSVSRDARDFILK   94 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~li~~   94 (135)
                      ..|++.|+|||++.+   .++.++|+|++|++++++++|..||.+.+.......+..+....   ....++.++.+++.+
T Consensus       183 ~~~~~~y~aPE~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  259 (287)
T 2wei_A          183 RIGTAYYIAPEVLRG---TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK  259 (287)
T ss_dssp             HHHHHTTCCHHHHTT---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHH
T ss_pred             ccCcccccChHHhcC---CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHH
Confidence            357889999999865   48899999999999999999999999888777777666655421   124578999999999


Q ss_pred             hcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           95 CLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      ||..+|.+||++.+++.||||.....
T Consensus       260 ~l~~dp~~Rps~~ell~hp~~~~~~~  285 (287)
T 2wei_A          260 MLTFHPSLRITATQCLEHPWIQKYSS  285 (287)
T ss_dssp             HTCSSGGGSCCHHHHHHSHHHHHHCC
T ss_pred             HcccChhhCcCHHHHhcCHHHhcccc
Confidence            99999999999999999999986543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.79  E-value=4.1e-19  Score=122.32  Aligned_cols=98  Identities=18%  Similarity=0.254  Sum_probs=85.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...||+.|+|||++.+.  .++.++||||+|+++++|++ |..||.+....+....+..+.....+..++..+.+++.+|
T Consensus       245 ~~~~t~~y~aPE~~~~~--~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~  322 (367)
T 3l9p_A          245 CAMLPVKWMPPEAFMEG--IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQC  322 (367)
T ss_dssp             GGGSCGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CcCCcccEECHHHhcCC--CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHH
Confidence            35678899999999875  68999999999999999998 9999998888888877777766666778899999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~  116 (135)
                      |..+|.+||++.+++++.+..
T Consensus       323 l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          323 WQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCCHhHCcCHHHHHHHHHHH
Confidence            999999999999998875443

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.79  E-value=3.2e-19  Score=118.45  Aligned_cols=100  Identities=28%  Similarity=0.397  Sum_probs=83.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC---CCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP---IPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~li~   93 (135)
                      ...|++.|+|||++...  .++.++|+|++|++++++++|..||.+.+.......+.......   .....+..+.+++.
T Consensus       170 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  247 (283)
T 3bhy_A          170 NIFGTPEFVAPEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIR  247 (283)
T ss_dssp             --CCCGGGCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHH
T ss_pred             ccCCCcCccCcceecCC--CCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHH
Confidence            45789999999999764  68999999999999999999999999888777666665544321   12456788999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      +||..+|.+||++.+++.|+||...
T Consensus       248 ~~l~~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          248 RLLVKDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             TTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             HHccCCHhHCcCHHHHHhCHHHHHH
Confidence            9999999999999999999999864

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.79  E-value=5.4e-19  Score=121.19  Aligned_cols=102  Identities=26%  Similarity=0.419  Sum_probs=78.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC---------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG---------------------   75 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~---------------------   75 (135)
                      ...||+.|+|||++.+. ..++.++|+||+|++++++++|+.||.+.+..+....+...                     
T Consensus       192 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  270 (362)
T 3pg1_A          192 HYVTHRWYRAPELVMQF-KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYL  270 (362)
T ss_dssp             ----CGGGCCHHHHTTC-TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHT
T ss_pred             eecccceecCcHHhcCC-CCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHH
Confidence            45789999999999863 36899999999999999999999999887765555443210                     


Q ss_pred             --CCCC--------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           76 --ELPP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        76 --~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                        ....        .....+..+.+++.+||..||.+||++.++++||||+...
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          271 RNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             TTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             HhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence              0000        1234577899999999999999999999999999999753

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.79  E-value=4.8e-19  Score=119.28  Aligned_cols=105  Identities=22%  Similarity=0.420  Sum_probs=79.0

Q ss_pred             cccccccccchhhhhcc---------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHcCC-CCCCCCccc
Q 032711           17 WHVSRWNSLTDQVVNSK---------NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE-WVQALFKIARGE-LPPIPDSVS   85 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---------~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~-~~~~~~~i~~~~-~~~~~~~~~   85 (135)
                      ..+||+.|+|||++...         ...++.++|+||+|++++++++|..||.... .......+.... ....+...+
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (313)
T 3cek_A          187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE  266 (313)
T ss_dssp             ---CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSC
T ss_pred             CCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccch
Confidence            45789999999998751         1257889999999999999999999997653 333333333322 234556678


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           86 RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        86 ~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      ..+.+++.+||..+|.+||++.++++|+||......
T Consensus       267 ~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~  302 (313)
T 3cek_A          267 KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP  302 (313)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC---
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHhcCccccCCCCc
Confidence            899999999999999999999999999999875443

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.79  E-value=6e-19  Score=118.81  Aligned_cols=101  Identities=28%  Similarity=0.511  Sum_probs=77.2

Q ss_pred             cccccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHHHcCCCCCCC--CcccHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIARGELPPIP--DSVSRDARD   90 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g~~p~~~~-~~~~~~~~i~~~~~~~~~--~~~~~~~~~   90 (135)
                      ...||+.|+|||++...   ...++.++|||++|++++++++|..||... ........+........+  ..++..+.+
T Consensus       183 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  262 (318)
T 2dyl_A          183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQS  262 (318)
T ss_dssp             ----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHH
T ss_pred             ccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHH
Confidence            35789999999999631   135789999999999999999999999764 344555555554443333  457899999


Q ss_pred             HHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           91 FILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        91 li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      ++.+||..||.+||++.++++|+||..
T Consensus       263 li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          263 FVKDCLTKDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             HHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred             HHHHHccCChhHCcCHHHHhhCHHHHh
Confidence            999999999999999999999999975

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.79  E-value=4.2e-19  Score=121.02  Aligned_cols=101  Identities=20%  Similarity=0.341  Sum_probs=82.0

Q ss_pred             cccccccccchhhhhccCCCCCc-hhhHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHHHcCCCCCCC-------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGL-PADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIARGELPPIP-------------   81 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~-~~dvws~G~~l~~l~~g~~p~~~~~~-~~~~~~i~~~~~~~~~-------------   81 (135)
                      ...|+..|+|||++.+. ..++. ++|+||+|++++++++|..||..... .+....+..... ..+             
T Consensus       209 ~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~  286 (348)
T 2pml_X          209 GSRGTYEFMPPEFFSNE-SSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNI-EYPLDRNHFLYPLTNK  286 (348)
T ss_dssp             SSCSCGGGCCGGGGSSC-CCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCC-CCCCSSSSSTTTTCC-
T ss_pred             CCCCCcCccCchhhcCC-CCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCc-CCccchhhhhcccccc
Confidence            45789999999999864 24555 89999999999999999999987665 555555554433 222             


Q ss_pred             ------CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           82 ------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        82 ------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                            ..++..+.+++.+||..+|.+||++.++++||||....
T Consensus       287 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~  330 (348)
T 2pml_X          287 KSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN  330 (348)
T ss_dssp             -------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             ccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCC
Confidence                  55789999999999999999999999999999998743

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.79  E-value=2.6e-19  Score=125.78  Aligned_cols=102  Identities=20%  Similarity=0.293  Sum_probs=74.2

Q ss_pred             hcccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARDF   91 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~l   91 (135)
                      ...+||+.|+|||++... ...++.++||||+|++++++++ |..||...........+......  ......+..+.++
T Consensus       184 ~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  263 (432)
T 3p23_A          184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIAREL  263 (432)
T ss_dssp             --CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHH
T ss_pred             cccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHH
Confidence            346799999999999742 1356789999999999999999 88888654433222222111111  1223345668899


Q ss_pred             HHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           92 ILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      +.+||..||.+||++.++++||||..
T Consensus       264 i~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          264 IEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             HHHHHhCCHhhCCCHHHHHhCccccC
Confidence            99999999999999999999999975

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.78  E-value=3.3e-19  Score=120.12  Aligned_cols=102  Identities=24%  Similarity=0.343  Sum_probs=82.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC---CCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP---IPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||++.+.  .++.++||||+|+++|+|++|..||.+.+.......+......+   ....++.++.+++.
T Consensus       178 ~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  255 (311)
T 3ork_A          178 AVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVL  255 (311)
T ss_dssp             ----CCTTCCHHHHHTC--CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHH
T ss_pred             ccCcCcccCCHHHhcCC--CCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHH
Confidence            45799999999999875  68999999999999999999999999888776665555443322   13457889999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      +||..||.+||+..+++.|+|+.....
T Consensus       256 ~~l~~dP~~R~~~~~~l~~~l~~~~~~  282 (311)
T 3ork_A          256 KALAKNPENRYQTAAEMRADLVRVHNG  282 (311)
T ss_dssp             HHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred             HHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence            999999999999999999999886443

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.78  E-value=1.5e-19  Score=122.23  Aligned_cols=97  Identities=16%  Similarity=0.306  Sum_probs=74.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|++++++++|..++..  .......+.....+......++.+.+++.+||
T Consensus       235 ~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  310 (332)
T 3qd2_B          235 GQVGTKLYMSPEQIHGN--NYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKFPLLFTQKYPQEHMMVQDML  310 (332)
T ss_dssp             SCC-CGGGSCHHHHHCC--CCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHH
T ss_pred             ccCCCcCccChHHhcCC--CCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCCCcccccCChhHHHHHHHHc
Confidence            35799999999999875  689999999999999999998665421  12233333333332223445678899999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      ..||.+||++.++++|+||+.
T Consensus       311 ~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          311 SPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             CSSGGGSCCHHHHHHSTTCCC
T ss_pred             cCCCCcCCCHHHHhhchhhhc
Confidence            999999999999999999975

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.77  E-value=6e-19  Score=119.48  Aligned_cols=102  Identities=26%  Similarity=0.415  Sum_probs=77.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHH-------------HcCCCC----
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWVQALFKI-------------ARGELP----   78 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~-~~~~~~~~i-------------~~~~~~----   78 (135)
                      ..+|+..|+|||++.+. ..++.++||||+|+++++|++|..||... +..+.+..+             ......    
T Consensus       189 ~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (330)
T 3nsz_A          189 VRVASRYFKGPELLVDY-QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR  267 (330)
T ss_dssp             SCCSCGGGCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTH
T ss_pred             cccccccccChhhhcCC-CcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccc
Confidence            45789999999999764 36899999999999999999999998543 222222211             111100    


Q ss_pred             -------------------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           79 -------------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        79 -------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                                         ..+..++.++.+|+.+||..||.+||+++++++||||....
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          268 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             HHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             hhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence                               01122688999999999999999999999999999999754

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.77  E-value=4e-20  Score=127.37  Aligned_cols=112  Identities=10%  Similarity=0.067  Sum_probs=80.7

Q ss_pred             hhhhhhhhhhh----cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHH--HHHH---HHc--
Q 032711            6 VEGLGNALRRK----WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQ--ALFK---IAR--   74 (135)
Q Consensus         6 ~~~~~~~~~~~----~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~--~~~~---i~~--   74 (135)
                      +.|+|.+....    ...||+.|+|||++.+....++.++||||+|+++|+|++|+.||.+.....  ....   ...  
T Consensus       235 L~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~  314 (371)
T 3q60_A          235 LGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGT  314 (371)
T ss_dssp             ECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCC
T ss_pred             EEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccc
Confidence            44555443322    345679999999997622368999999999999999999999997653210  0000   000  


Q ss_pred             -CCCCCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           75 -GELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        75 -~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                       ....+....++..+.+++.+||..||.+||++.++++||||..
T Consensus       315 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  358 (371)
T 3q60_A          315 DSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ  358 (371)
T ss_dssp             CSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred             cccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence             0011223467899999999999999999999999999999975

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.77  E-value=1.1e-18  Score=122.56  Aligned_cols=99  Identities=21%  Similarity=0.320  Sum_probs=73.0

Q ss_pred             cccccccccchhhhhcc-----CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCC--CCC----CCcc
Q 032711           17 WHVSRWNSLTDQVVNSK-----NGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGEL--PPI----PDSV   84 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~-----~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~--~~~----~~~~   84 (135)
                      ..+||+.|+|||++.+.     ...++.++||||+|++++++++ |..||.......  ..+.....  ...    ...+
T Consensus       191 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~  268 (434)
T 2rio_A          191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSL  268 (434)
T ss_dssp             ----CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHH
T ss_pred             CCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcccccccccccc
Confidence            45799999999999751     1368999999999999999998 899996654322  12222222  111    1234


Q ss_pred             cHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           85 SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        85 ~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      +.++.+++.+||..||.+||++.++++||||..
T Consensus       269 ~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          269 IAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             HHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             hHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence            678999999999999999999999999999964

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.77  E-value=1.2e-18  Score=117.75  Aligned_cols=102  Identities=21%  Similarity=0.386  Sum_probs=79.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|++.|+|||++.+.  .++.++||||+|++++++++ |..||.+.+..+....+........+..++..+.+++.+||
T Consensus       199 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  276 (323)
T 3qup_A          199 SKLPVKWLALESLADN--LYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCW  276 (323)
T ss_dssp             --CCGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHTT
T ss_pred             ccCcccccCchhhcCC--CCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCCCCccCHHHHHHHHHHc
Confidence            3567789999999875  68999999999999999999 89999887777777777666666677788999999999999


Q ss_pred             ccCCCCCCC-------HHHHhhCcCCCCCCCC
Q 032711           97 QVNPNDRPT-------AAQLMEHPFVKRPLPT  121 (135)
Q Consensus        97 ~~~p~~Rps-------~~~~l~~~~~~~~~~~  121 (135)
                      ..||.+||+       +++++.|+|+......
T Consensus       277 ~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~  308 (323)
T 3qup_A          277 SADPKQRPSFTCLRMELENILGHLSVLSTSQD  308 (323)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHHC---------
T ss_pred             cCChhhCcCHHHHHHHHHHHHHHhhhcCCCCC
Confidence            999999999       6778889999875443

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.77  E-value=2.1e-18  Score=113.68  Aligned_cols=104  Identities=19%  Similarity=0.340  Sum_probs=82.5

Q ss_pred             hhhhhhhhhcccccccccchhhhhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc-CCCCCCCCccc
Q 032711            8 GLGNALRRKWHVSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR-GELPPIPDSVS   85 (135)
Q Consensus         8 ~~~~~~~~~~~~gt~~~~aPE~~~~~~-~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~   85 (135)
                      |++.........||+.|+|||++.+.. ..++.++||||+|++++++++|..||.+.+.......+.. ...+..+..++
T Consensus       158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (271)
T 3kmu_A          158 DVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGIS  237 (271)
T ss_dssp             GSCCTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCC
T ss_pred             cceeeecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCC
Confidence            444444555678999999999998641 1233479999999999999999999998887766555543 33445677889


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           86 RDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        86 ~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      ..+.+++.+||..+|.+||++.++++
T Consensus       238 ~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          238 PHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999999875

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.77  E-value=3.8e-18  Score=115.06  Aligned_cols=101  Identities=19%  Similarity=0.329  Sum_probs=80.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH-cCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA-RGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...||+.|+|||++.+.  .++.++||||+|+++|++++|..||.+.+.......+. .......+..++..+.+++.+|
T Consensus       198 ~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  275 (309)
T 3p86_A          198 SAAGTPEWMAPEVLRDE--PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGC  275 (309)
T ss_dssp             ----CCTTSCHHHHTTC--CCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHH
T ss_pred             cCCCCccccChhhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHH
Confidence            45799999999999875  68999999999999999999999999888776665553 3333466778899999999999


Q ss_pred             cccCCCCCCCHHHHhh--CcCCCCCC
Q 032711           96 LQVNPNDRPTAAQLME--HPFVKRPL  119 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~--~~~~~~~~  119 (135)
                      |..+|.+||++.++++  ..++....
T Consensus       276 l~~dP~~Rps~~~ll~~L~~~~~~~~  301 (309)
T 3p86_A          276 WTNEPWKRPSFATIMDLLRPLIKSAV  301 (309)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred             ccCChhhCcCHHHHHHHHHHHHHhCC
Confidence            9999999999999976  45555433

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.77  E-value=1.3e-18  Score=117.61  Aligned_cols=101  Identities=26%  Similarity=0.352  Sum_probs=78.2

Q ss_pred             cccccccccchhhhhc-cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH-HHHHHHHcCCCCCC---CCcccHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNS-KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV-QALFKIARGELPPI---PDSVSRDARDF   91 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~-~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~-~~~~~i~~~~~~~~---~~~~~~~~~~l   91 (135)
                      ...||+.|+|||++.. ....++.++|+||+|++++++++|..||...... .....+..+.....   +..++..+.++
T Consensus       175 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  254 (322)
T 2ycf_A          175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDL  254 (322)
T ss_dssp             HHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHH
T ss_pred             cccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHH
Confidence            4578999999999853 1236789999999999999999999999764332 22223333333221   24578899999


Q ss_pred             HHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           92 ILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      +.+||..||.+||++.++++|+||..
T Consensus       255 i~~~l~~dP~~Rps~~~~l~h~~~~~  280 (322)
T 2ycf_A          255 VKKLLVVDPKARFTTEEALRHPWLQD  280 (322)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred             HHHHcccCHhhCCCHHHHhhCcCcCC
Confidence            99999999999999999999999975

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.76  E-value=1.1e-18  Score=118.00  Aligned_cols=95  Identities=25%  Similarity=0.384  Sum_probs=78.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...||+.|+|||++... ..++.++|+|++|++++++++|..||.....      +.... ...+..++.++.+++.+||
T Consensus       207 ~~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~-~~~~~~~~~~~~~li~~~l  278 (320)
T 3a99_A          207 DFDGTRVYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQ-VFFRQRVSSECQHLIRWCL  278 (320)
T ss_dssp             CCCSCGGGSCHHHHHHS-CBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHCC-CCCSSCCCHHHHHHHHHHT
T ss_pred             CCCCCccCCChHHhccC-CCCCccchHHhHHHHHHHHHHCCCCCCChhh------hhccc-ccccccCCHHHHHHHHHHc
Confidence            35789999999999875 2347889999999999999999999966431      22222 2345678899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      ..+|.+||++.++++|+||....
T Consensus       279 ~~dp~~Rps~~~ll~hp~~~~~~  301 (320)
T 3a99_A          279 ALRPSDRPTFEEIQNHPWMQDVL  301 (320)
T ss_dssp             CSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             cCChhhCcCHHHHhcCHhhcCcc
Confidence            99999999999999999998754

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.76  E-value=2.9e-18  Score=115.39  Aligned_cols=97  Identities=23%  Similarity=0.388  Sum_probs=76.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...|+..|+|||++... ...+.++|+|++|++++++++|+.||.....      +.... ...+..++..+.+++.+||
T Consensus       197 ~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~-~~~~~~~~~~~~~li~~~l  268 (312)
T 2iwi_A          197 DFDGTRVYSPPEWISRH-QYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAE-LHFPAHVSPDCCALIRRCL  268 (312)
T ss_dssp             CCCSCTTTSCHHHHHHS-CBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHTC-CCCCTTSCHHHHHHHHHHT
T ss_pred             ccCCcccccCceeeecC-CCCCccchHHHHHHHHHHHHHCCCCCCChHH------Hhhhc-cCCcccCCHHHHHHHHHHc
Confidence            45789999999999875 2335689999999999999999999965432      11222 2455678899999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRPLPT  121 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~~~~  121 (135)
                      ..+|.+||++.++++|+||......
T Consensus       269 ~~~p~~Rps~~e~l~~~~~~~~~~~  293 (312)
T 2iwi_A          269 APKPSSRPSLEEILLDPWMQTPAED  293 (312)
T ss_dssp             CSSTTTSCCHHHHHHSTTTCC----
T ss_pred             cCChhhCcCHHHHhcChhhcCchhc
Confidence            9999999999999999999975543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.76  E-value=1.1e-19  Score=125.39  Aligned_cols=106  Identities=16%  Similarity=0.142  Sum_probs=78.3

Q ss_pred             hhhhhhhhhh----hcccccccccchhhhhcc---------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHH
Q 032711            6 VEGLGNALRR----KWHVSRWNSLTDQVVNSK---------NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI   72 (135)
Q Consensus         6 ~~~~~~~~~~----~~~~gt~~~~aPE~~~~~---------~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i   72 (135)
                      +.|+|.....    ...+| +.|+|||++...         ...++.++||||+|+++|+|++|+.||.+.+.......+
T Consensus       247 L~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~  325 (377)
T 3byv_A          247 LTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWI  325 (377)
T ss_dssp             ECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGG
T ss_pred             EEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhh
Confidence            4555544432    34578 999999999863         014899999999999999999999999765433222222


Q ss_pred             HcCCCCCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           73 ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      .     .....++..+.+++.+||..||.+||++.++++||||..
T Consensus       326 ~-----~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          326 F-----RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             G-----SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             h-----hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence            1     223567899999999999999999999999999999975

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.75  E-value=2.6e-18  Score=118.48  Aligned_cols=92  Identities=22%  Similarity=0.376  Sum_probs=79.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..||+.|+|||++.+.  .++.++||||+|+++|+|++ |..||.+....+....+..+.....+..++..+.+++.+||
T Consensus       265 ~~~t~~y~aPE~~~~~--~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  342 (370)
T 2psq_A          265 GRLPVKWMAPEALFDR--VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCW  342 (370)
T ss_dssp             TTSCGGGCCHHHHHTC--CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             CCcccceECHhHhcCC--CCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence            4567889999999874  68999999999999999998 99999887766666666666656677788999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      ..+|.+||++.++++
T Consensus       343 ~~dP~~Rpt~~ell~  357 (370)
T 2psq_A          343 HAVPSQRPTFKQLVE  357 (370)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCChhhCcCHHHHHH
Confidence            999999999999875

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.75  E-value=2.8e-18  Score=118.65  Aligned_cols=93  Identities=23%  Similarity=0.374  Sum_probs=81.5

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..||..|+|||++.+.  .++.++||||+|++++++++ |..||.+.+..+....+........+..++.++.+++.+||
T Consensus       253 ~~~t~~y~aPE~~~~~--~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  330 (382)
T 3tt0_A          253 GRLPVKWMAPEALFDR--IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCW  330 (382)
T ss_dssp             CCCGGGGSCHHHHHSC--CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHT
T ss_pred             CCCCcceeCHHHhcCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHc
Confidence            4567889999999874  68999999999999999999 99999988877777777766666677888999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..+|.+||++.+++++
T Consensus       331 ~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          331 HAVPSQRPTFKQLVED  346 (382)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             CCChhhCcCHHHHHHH
Confidence            9999999999988764

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.75  E-value=6.7e-18  Score=111.47  Aligned_cols=93  Identities=20%  Similarity=0.317  Sum_probs=81.1

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|+..|+|||++...  .++.++|+||+|++++++++ |..||.+.........+........+...+..+.+++.+||
T Consensus       167 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  244 (269)
T 4hcu_A          167 TKFPVKWASPEVFSFS--RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW  244 (269)
T ss_dssp             TTCCGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             cccccccCCHHHhcCC--CCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHc
Confidence            4567789999999875  68999999999999999999 99999988888777777766555667778999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..+|.+||++.+++++
T Consensus       245 ~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          245 RERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCCcccCcCHHHHHHH
Confidence            9999999999998864

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.75  E-value=3.6e-19  Score=121.26  Aligned_cols=102  Identities=24%  Similarity=0.410  Sum_probs=60.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHH----HHHHcCCC---CCCCCcccHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQAL----FKIARGEL---PPIPDSVSRDAR   89 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~----~~i~~~~~---~~~~~~~~~~~~   89 (135)
                      ..+||+.|+|||++...  .++.++|+||+|++++++++|..||.........    ..+.....   .+....++..+.
T Consensus       188 ~~~~t~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (336)
T 3fhr_A          188 TPCYTPYYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAK  265 (336)
T ss_dssp             ----------------C--HHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHH
T ss_pred             cCCCCcCccChhhhCCC--CCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHH
Confidence            45789999999999664  6889999999999999999999999765433221    11111111   122346789999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           90 DFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      +++.+||..+|.+||++.++++||||.....
T Consensus       266 ~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  296 (336)
T 3fhr_A          266 QLIRLLLKTDPTERLTITQFMNHPWINQSMV  296 (336)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHHSHHHHTGGG
T ss_pred             HHHHHHCCCChhHCcCHHHHhcCcccccccc
Confidence            9999999999999999999999999987543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.75  E-value=1.5e-18  Score=116.87  Aligned_cols=95  Identities=20%  Similarity=0.215  Sum_probs=64.6

Q ss_pred             cccccccccchhhhhccC----CCCCchhhHHHHHHHHHHHHhCCCCCCC----------C-----cHHHHHHHHHcCCC
Q 032711           17 WHVSRWNSLTDQVVNSKN----GGYGLPADIWSVGCTVLEMLTRCRPYFG----------V-----EWVQALFKIARGEL   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~----~~~~~~~dvws~G~~l~~l~~g~~p~~~----------~-----~~~~~~~~i~~~~~   77 (135)
                      +.+||+.|||||++.+..    ..++.++||||+||++|||++|.+|+..          .     ........+.....
T Consensus       171 ~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  250 (303)
T 3hmm_A          171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL  250 (303)
T ss_dssp             ---CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC
T ss_pred             cccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccC
Confidence            358999999999997531    1357789999999999999999765432          1     11222222332222


Q ss_pred             -CCCCCc-----ccHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           78 -PPIPDS-----VSRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        78 -~~~~~~-----~~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                       +..|..     ....+.+++.+||..||.+||++.++++
T Consensus       251 rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~  290 (303)
T 3hmm_A          251 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             CCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence             233322     3356789999999999999999999875

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.75  E-value=5.9e-18  Score=111.70  Aligned_cols=94  Identities=20%  Similarity=0.492  Sum_probs=78.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-CCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~li~~~   95 (135)
                      ...||+.|+|||++.+.  .++.++|+||+|++++++++|..||.+.+.......+..... ...+..++..+.+++.+|
T Consensus       173 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  250 (271)
T 3dtc_A          173 SAAGAYAWMAPEVIRAS--MFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDC  250 (271)
T ss_dssp             ---CCGGGSCHHHHHHC--CCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCCccceeCHHHhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHH
Confidence            35789999999999875  689999999999999999999999998877666655544433 455677889999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032711           96 LQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~  112 (135)
                      |..+|.+||++.+++++
T Consensus       251 l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          251 WNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             hcCCcccCcCHHHHHHH
Confidence            99999999999999864

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.75  E-value=1.7e-18  Score=117.35  Aligned_cols=94  Identities=24%  Similarity=0.396  Sum_probs=78.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...|+..|+|||++...  .++.++|+||+|+++|++++ |..||.+.........+........+..++..+.+++.+|
T Consensus       176 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  253 (325)
T 3kex_A          176 EAKTPIKWMALESIHFG--KYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKC  253 (325)
T ss_dssp             ---CCTTTSCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTTTTHHHHHH
T ss_pred             CCCCcccccChHHhccC--CCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHH
Confidence            34678899999999875  68999999999999999999 9999988776666666666655566777888999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032711           96 LQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~  112 (135)
                      |..+|.+||++.+++++
T Consensus       254 l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          254 WMIDENIRPTFKELANE  270 (325)
T ss_dssp             TCSCTTTSCCHHHHHHH
T ss_pred             cCCChhhCcCHHHHHHH
Confidence            99999999999998764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.75  E-value=2.2e-18  Score=117.94  Aligned_cols=94  Identities=23%  Similarity=0.444  Sum_probs=77.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHH-HHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWV-QALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ...||+.|+|||++.+.  .++.++||||+|+++++|++ |..||.+.... .....+........+..++.++.+++.+
T Consensus       254 ~~~~t~~y~aPE~~~~~--~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  331 (359)
T 3vhe_A          254 DARLPLKWMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD  331 (359)
T ss_dssp             -CEECGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHH
T ss_pred             ccCCCceeEChhhhcCC--CCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence            35678899999999874  68999999999999999998 99999876543 3333444455556677789999999999


Q ss_pred             hcccCCCCCCCHHHHhhC
Q 032711           95 CLQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~  112 (135)
                      ||..+|.+||++.++++|
T Consensus       332 ~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          332 CWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HccCChhhCCCHHHHHHH
Confidence            999999999999999865

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.75  E-value=6e-18  Score=115.04  Aligned_cols=93  Identities=16%  Similarity=0.436  Sum_probs=82.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...||+.|+|||++...  .++.++|+||+|+++|++++ |..||.+....+....+..+.....+..++..+.+++.+|
T Consensus       235 ~~~~t~~y~aPE~~~~~--~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  312 (343)
T 1luf_A          235 NDAIPIRWMPPESIFYN--RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLC  312 (343)
T ss_dssp             -CCBCGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCcccceecChhhhccC--CcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHH
Confidence            35678899999999875  68999999999999999998 9999998888777777777776677788899999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032711           96 LQVNPNDRPTAAQLME  111 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~  111 (135)
                      |..+|.+||++.++++
T Consensus       313 l~~~p~~Rps~~~~~~  328 (343)
T 1luf_A          313 WSKLPADRPSFCSIHR  328 (343)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             cccCcccCCCHHHHHH
Confidence            9999999999998875

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.75  E-value=2e-18  Score=115.00  Aligned_cols=92  Identities=18%  Similarity=0.312  Sum_probs=80.3

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .||+.|+|||++...  .++.++|+||+|++++++++ |..||.+.+..+....+........+..++..+.+++.+||.
T Consensus       174 ~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~  251 (287)
T 1u59_A          174 KWPLKWYAPECINFR--KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWI  251 (287)
T ss_dssp             CCCGGGCCHHHHHHC--EECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTC
T ss_pred             cccccccCHHHhccC--CCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHHHHHHHHHHcC
Confidence            567889999999864  58999999999999999998 999998877777777777666666778899999999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032711           98 VNPNDRPTAAQLMEH  112 (135)
Q Consensus        98 ~~p~~Rps~~~~l~~  112 (135)
                      .+|.+||++.+++++
T Consensus       252 ~~p~~Rps~~~l~~~  266 (287)
T 1u59_A          252 YKWEDRPDFLTVEQR  266 (287)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             CChhhCcCHHHHHHH
Confidence            999999999998865

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.75  E-value=4.8e-18  Score=115.07  Aligned_cols=97  Identities=19%  Similarity=0.260  Sum_probs=84.0

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|++.|+|||++...  .++.++|+|++|++++++++ |..||...........+........+..++..+.+++.+||
T Consensus       205 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  282 (327)
T 2yfx_A          205 AMLPVKWMPPEAFMEG--IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCW  282 (327)
T ss_dssp             GGSCGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             cCCCcceeCHhHhcCC--CCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHh
Confidence            4678899999999874  68999999999999999998 99999888777777777766665667788999999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~  116 (135)
                      ..+|.+||++.+++++.+..
T Consensus       283 ~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          283 QHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             CSSGGGSCCHHHHHHHHHHH
T ss_pred             cCChhhCcCHHHHHHHHHHH
Confidence            99999999999999876554

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.75  E-value=5.7e-18  Score=113.09  Aligned_cols=99  Identities=21%  Similarity=0.341  Sum_probs=71.6

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHHHcCCC---CCCCCcccHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIARGEL---PPIPDSVSRDARDF   91 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~-~~~~~~i~~~~~---~~~~~~~~~~~~~l   91 (135)
                      ....||+.|+|||++.+. ..++.++|+|++|++++++++   ||..... ......+.....   ...+...+..+.++
T Consensus       188 ~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  263 (303)
T 1zy4_A          188 TSAIGTAMYVATEVLDGT-GHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKI  263 (303)
T ss_dssp             ------CTTSCHHHHTSC-SCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHH
T ss_pred             ccCCCcccccCcccccCC-CCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCccccccchHHHHHH
Confidence            345789999999999864 368999999999999999997   5543322 333334433222   22344567789999


Q ss_pred             HHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           92 ILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      +.+||..||.+||++.++++||||...
T Consensus       264 i~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (303)
T 1zy4_A          264 IRLLIDHDPNKRPGARTLLNSGWLPVK  290 (303)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred             HHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence            999999999999999999999999763

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.74  E-value=3.3e-18  Score=116.01  Aligned_cols=91  Identities=19%  Similarity=0.409  Sum_probs=79.7

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .||+.|+|||++...  .++.++||||+|++++++++ |..||.+....+....+......+.+..++..+.+++.+||.
T Consensus       215 ~~t~~y~aPE~~~~~--~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  292 (325)
T 3kul_A          215 KIPIRWTAPEAIAFR--TFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWH  292 (325)
T ss_dssp             -CCGGGSCHHHHHHC--EECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCcccccCHhHhcCC--CCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHHHHHHHHcc
Confidence            456789999999874  68999999999999999998 999999888888777777766666777889999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++++
T Consensus       293 ~dp~~Rps~~eil~  306 (325)
T 3kul_A          293 KDRAQRPRFSQIVS  306 (325)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999998875

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.74  E-value=7.7e-19  Score=118.93  Aligned_cols=101  Identities=25%  Similarity=0.491  Sum_probs=61.9

Q ss_pred             ccccccccchhhhhcc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH-HHHHHHHcCCCCCC----CCcccHHHHH
Q 032711           18 HVSRWNSLTDQVVNSK--NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV-QALFKIARGELPPI----PDSVSRDARD   90 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~--~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~-~~~~~i~~~~~~~~----~~~~~~~~~~   90 (135)
                      ..||+.|+|||++...  ...++.++|+||+|++++++++|..||.+.+.. +....+..+.....    ...++..+.+
T Consensus       185 ~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  264 (327)
T 3aln_A          185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFIN  264 (327)
T ss_dssp             ---------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHH
T ss_pred             CCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHH
Confidence            4789999999998421  135889999999999999999999999775432 22222222222222    2357889999


Q ss_pred             HHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           91 FILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        91 li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      ++.+||..||.+||++.++++||||...
T Consensus       265 li~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          265 FVNLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence            9999999999999999999999999753

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.74  E-value=8.4e-18  Score=122.56  Aligned_cols=90  Identities=19%  Similarity=0.310  Sum_probs=78.7

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .+++.|+|||++...  .++.++||||+|+++|+|++ |..||.+.+..+....+..+.....+..++..+.+++.+||.
T Consensus       500 ~~~~~y~APE~~~~~--~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~  577 (613)
T 2ozo_A          500 KWPLKWYAPECINFR--KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWI  577 (613)
T ss_dssp             --CCTTSCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTC
T ss_pred             CCccceeCHhhhcCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcC
Confidence            456789999999874  68999999999999999998 999999888777777777776667778899999999999999


Q ss_pred             cCCCCCCCHHHHh
Q 032711           98 VNPNDRPTAAQLM  110 (135)
Q Consensus        98 ~~p~~Rps~~~~l  110 (135)
                      .+|.+||++.+++
T Consensus       578 ~dP~~RPs~~~l~  590 (613)
T 2ozo_A          578 YKWEDRPDFLTVE  590 (613)
T ss_dssp             SSTTTSCCHHHHH
T ss_pred             CChhHCcCHHHHH
Confidence            9999999999875

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.74  E-value=4.9e-18  Score=115.22  Aligned_cols=93  Identities=24%  Similarity=0.415  Sum_probs=78.9

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..||..|+|||++.+.  .++.++||||+|++++++++ |..||.+.........+........+...+..+.+++.+||
T Consensus       179 ~~~t~~y~aPE~~~~~--~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  256 (327)
T 3poz_A          179 GKVPIKWMALESILHR--IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW  256 (327)
T ss_dssp             -CCCGGGSCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHT
T ss_pred             CCccccccChHHhccC--CCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHc
Confidence            3567899999999875  68999999999999999999 99999887766665566666555667788999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..+|.+||++.+++.+
T Consensus       257 ~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          257 MIDADSRPKFRELIIE  272 (327)
T ss_dssp             CSCGGGSCCHHHHHHH
T ss_pred             CCChhhCCCHHHHHHH
Confidence            9999999999998754

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.74  E-value=8.4e-18  Score=122.99  Aligned_cols=92  Identities=20%  Similarity=0.332  Sum_probs=80.5

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..||+.|+|||++...  .++.++||||+|+++++|++ |..||.+.+..+....+..+.....+..++.++.+++.+||
T Consensus       532 ~~~t~~y~APE~~~~~--~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl  609 (635)
T 4fl3_A          532 GKWPVKWYAPECINYY--KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCW  609 (635)
T ss_dssp             ---CGGGSCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCceeeeChhhhcCC--CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence            3567889999999875  68999999999999999998 99999998888888888777766778889999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      ..+|.+||++.++++
T Consensus       610 ~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          610 TYDVENRPGFAAVEL  624 (635)
T ss_dssp             CSSTTTSCCHHHHHH
T ss_pred             CCCHhHCcCHHHHHH
Confidence            999999999998864

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.74  E-value=1.2e-17  Score=112.75  Aligned_cols=94  Identities=22%  Similarity=0.361  Sum_probs=81.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...||+.|+|||++.+.  .++.++|+||+|++++++++ |..||.+.+.......+........+..++..+.+++.+|
T Consensus       199 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  276 (322)
T 1p4o_A          199 KGLLPVRWMSPESLKDG--VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMC  276 (322)
T ss_dssp             SSEECGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCCCCCccChhhhccC--CCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHH
Confidence            34668899999999874  68999999999999999999 8899988887777777777666667778899999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032711           96 LQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~  112 (135)
                      |..+|.+||++.+++++
T Consensus       277 l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          277 WQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cCCCcccCcCHHHHHHH
Confidence            99999999999998764

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.74  E-value=5.6e-18  Score=112.52  Aligned_cols=92  Identities=22%  Similarity=0.449  Sum_probs=78.5

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+++.|+|||++...  .++.++|+||+|++++++++ |..||.+....+....+......+.+..++..+.+++.+||
T Consensus       177 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l  254 (281)
T 1mp8_A          177 GKLPIKWMAPESINFR--RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW  254 (281)
T ss_dssp             --CCGGGCCHHHHHHC--CCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCcccccChhhcccC--CCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence            3567789999999874  68999999999999999996 99999887766667677766666677888999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      ..+|.+||++.++++
T Consensus       255 ~~~p~~Rps~~~l~~  269 (281)
T 1mp8_A          255 AYDPSRRPRFTELKA  269 (281)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             cCChhhCcCHHHHHH
Confidence            999999999998875

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.74  E-value=1.4e-17  Score=110.65  Aligned_cols=93  Identities=19%  Similarity=0.271  Sum_probs=81.0

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..||+.|+|||++...  .++.++|+||+|++++++++ |..||...+.......+........+...+..+.+++.+||
T Consensus       181 ~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  258 (283)
T 3gen_A          181 SKFPVRWSPPEVLMYS--KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCW  258 (283)
T ss_dssp             TTSCGGGCCHHHHHHC--CCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTT
T ss_pred             CccCcccCCHHHhccC--CCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHHHHHc
Confidence            3567789999999875  68999999999999999998 99999988887777777776655667778899999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..+|.+||++.++++|
T Consensus       259 ~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          259 HEKADERPTFKILLSN  274 (283)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCChhHCcCHHHHHHH
Confidence            9999999999998864

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.74  E-value=2.4e-17  Score=112.12  Aligned_cols=91  Identities=20%  Similarity=0.388  Sum_probs=78.8

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .|+..|+|||++...  .++.++|+||+|++++++++ |..||.+....+....+..+...+.+..++..+.+++.+||.
T Consensus       211 ~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  288 (333)
T 1mqb_A          211 KIPIRWTAPEAISYR--KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQ  288 (333)
T ss_dssp             CCCGGGSCHHHHHSC--CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTC
T ss_pred             CccccccCchhcccC--CCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCHHHHHHHHHHcC
Confidence            457789999999864  68999999999999999998 999998888777777777665556677889999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++++
T Consensus       289 ~~p~~Rps~~~l~~  302 (333)
T 1mqb_A          289 QERARRPKFADIVS  302 (333)
T ss_dssp             SSTTTSCCHHHHHH
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999988765

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.74  E-value=2.1e-17  Score=116.64  Aligned_cols=91  Identities=21%  Similarity=0.456  Sum_probs=80.0

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||++...  .++.++||||+|++++++++ |..||.+.+..+....+..+...+.+..++..+.+++.+||.
T Consensus       346 ~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~  423 (454)
T 1qcf_A          346 KFPIKWTAPEAINFG--SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWK  423 (454)
T ss_dssp             SSCGGGSCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTC
T ss_pred             cccccccCHHHhccC--CCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcc
Confidence            457789999999874  68999999999999999999 999999888877777777666566677889999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.+++.
T Consensus       424 ~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          424 NRPEERPTFEYIQS  437 (454)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhHCcCHHHHHH
Confidence            99999999998864

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.74  E-value=7.3e-18  Score=112.48  Aligned_cols=91  Identities=20%  Similarity=0.341  Sum_probs=79.5

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .|++.|+|||++...  .++.++|+||+|++++++++ |..||.+.+.......+........+..++..+.+++.+||.
T Consensus       181 ~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  258 (291)
T 1xbb_A          181 KWPVKWYAPECINYY--KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWT  258 (291)
T ss_dssp             CCCGGGCCHHHHHHC--EEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCceeeChHHhccC--CCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            456889999999874  57899999999999999999 999999888777777777666666777889999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++++
T Consensus       259 ~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          259 YDVENRPGFAAVEL  272 (291)
T ss_dssp             SSTTTSCCHHHHHH
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999998864

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.74  E-value=7.3e-18  Score=111.16  Aligned_cols=92  Identities=21%  Similarity=0.311  Sum_probs=80.1

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .|++.|+|||++.+.  .++.++|+||+|++++++++ |..||...........+........+...+..+.+++.+||.
T Consensus       166 ~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  243 (268)
T 3sxs_A          166 KFPVKWSAPEVFHYF--KYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWH  243 (268)
T ss_dssp             CCCGGGCCHHHHHHS--EEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHTTC
T ss_pred             CcCcccCCHHHHhcc--CCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHHHHcC
Confidence            456679999999874  58899999999999999998 999999888877777777766666677788999999999999


Q ss_pred             cCCCCCCCHHHHhhC
Q 032711           98 VNPNDRPTAAQLMEH  112 (135)
Q Consensus        98 ~~p~~Rps~~~~l~~  112 (135)
                      .+|.+||++.+++++
T Consensus       244 ~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          244 ELPEKRPTFQQLLSS  258 (268)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             CChhhCcCHHHHHHH
Confidence            999999999999864

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.74  E-value=6.7e-18  Score=112.08  Aligned_cols=93  Identities=19%  Similarity=0.410  Sum_probs=78.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|++.|+|||++...  .++.++|+||+|++++++++ |+.||......+....+......+.+..++..+.+++.+||
T Consensus       174 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  251 (281)
T 3cc6_A          174 TRLPIKWMSPESINFR--RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCW  251 (281)
T ss_dssp             CCCCGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCCcceeCchhhccC--CCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence            4567889999999864  68999999999999999998 99999876655555556555555667778999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..+|.+||++.+++.+
T Consensus       252 ~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          252 DYDPSDRPRFTELVCS  267 (281)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCCchhCcCHHHHHHH
Confidence            9999999999998753

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.73  E-value=1.8e-17  Score=109.12  Aligned_cols=92  Identities=21%  Similarity=0.316  Sum_probs=79.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|+..|+|||++...  .++.++|+||+|++++++++ |..||...+.......+..+.....+...+..+.+++.+||
T Consensus       165 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l  242 (267)
T 3t9t_A          165 TKFPVKWASPEVFSFS--RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW  242 (267)
T ss_dssp             TTCCGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             ccccccccChhhhcCC--CccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHHHHc
Confidence            4567789999999874  68999999999999999999 89999888877777777766555566778899999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      ..+|.+||++.++++
T Consensus       243 ~~~p~~Rps~~~ll~  257 (267)
T 3t9t_A          243 RERPEDRPAFSRLLR  257 (267)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             cCChhhCcCHHHHHH
Confidence            999999999999875

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.73  E-value=3.3e-17  Score=115.64  Aligned_cols=99  Identities=21%  Similarity=0.368  Sum_probs=83.3

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..++..|+|||++...  .++.++||||+|+++|++++ |..||.+....+....+..+...+.+..++..+.+++.+||
T Consensus       341 ~~~~~~y~aPE~~~~~--~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  418 (452)
T 1fmk_A          341 AKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW  418 (452)
T ss_dssp             --CCGGGSCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             CcccccccCHhHHhcC--CCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence            3467789999999874  68999999999999999999 99999988887777777766656667788999999999999


Q ss_pred             ccCCCCCCCHHHHhh--CcCCCCC
Q 032711           97 QVNPNDRPTAAQLME--HPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~--~~~~~~~  118 (135)
                      ..+|.+||++++++.  ..++...
T Consensus       419 ~~dP~~Rpt~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          419 RKEPEERPTFEYLQAFLEDYFTST  442 (452)
T ss_dssp             CSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             cCChhhCcCHHHHHHHHHHHhccC
Confidence            999999999999875  4555543

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.73  E-value=2.9e-17  Score=110.54  Aligned_cols=93  Identities=17%  Similarity=0.449  Sum_probs=75.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--cHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV--EWVQALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ...||+.|+|||++.+.  .++.++||||+|++++++++|..||...  ........+........+..++..+.+++.+
T Consensus       162 ~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  239 (307)
T 2eva_A          162 NNKGSAAWMAPEVFEGS--NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTR  239 (307)
T ss_dssp             ---CCTTSSCHHHHTCC--CCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHH
T ss_pred             cCCCCCceEChhhhCCC--CCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHH
Confidence            35789999999999864  6899999999999999999999999753  2333444455555556667789999999999


Q ss_pred             hcccCCCCCCCHHHHhh
Q 032711           95 CLQVNPNDRPTAAQLME  111 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~  111 (135)
                      ||..+|.+||++.++++
T Consensus       240 ~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          240 CWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HhcCChhhCcCHHHHHH
Confidence            99999999999999875

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.73  E-value=1.2e-17  Score=113.33  Aligned_cols=92  Identities=24%  Similarity=0.404  Sum_probs=78.9

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..||+.|+|||++.+.  .++.++||||+|+++|++++ |..||.+.........+......+.+..++..+.+++.+||
T Consensus       179 ~~~t~~y~aPE~~~~~--~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  256 (327)
T 3lzb_A          179 GKVPIKWMALESILHR--IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCW  256 (327)
T ss_dssp             -CCCGGGSCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHT
T ss_pred             CCccccccCHHHHcCC--CCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHc
Confidence            3567789999999875  68999999999999999999 99999887766666666666666677788999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      ..+|.+||++.++++
T Consensus       257 ~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          257 MIDADSRPKFRELII  271 (327)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCChhHCcCHHHHHH
Confidence            999999999998875

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.73  E-value=1.3e-17  Score=115.08  Aligned_cols=91  Identities=20%  Similarity=0.398  Sum_probs=75.1

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||++...  .++.++||||+|+++|++++ |..||.+....+....+..+...+.+..++..+.+++.+||.
T Consensus       211 ~~~~~y~aPE~~~~~--~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~  288 (373)
T 2qol_A          211 KIPIRWTSPEAIAYR--KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQ  288 (373)
T ss_dssp             ---CTTSCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHHHHHHHHHHTC
T ss_pred             CcCCCccChhhhccC--CcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHhC
Confidence            346789999999875  68999999999999999987 999998888777776666554455667789999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++++
T Consensus       289 ~dp~~RPs~~~i~~  302 (373)
T 2qol_A          289 KDRNNRPKFEQIVS  302 (373)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             cChhhCcCHHHHHH
Confidence            99999999988764

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.73  E-value=1e-17  Score=115.66  Aligned_cols=90  Identities=19%  Similarity=0.362  Sum_probs=78.3

Q ss_pred             ccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhccc
Q 032711           20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQV   98 (135)
Q Consensus        20 gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~   98 (135)
                      ++..|+|||++...  .++.++||||+|+++|++++ |..||.+.........+..+...+.+..++..+.+++.+||..
T Consensus       277 ~~~~y~aPE~~~~~--~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  354 (377)
T 3cbl_A          277 VPVKWTAPEALNYG--RYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAY  354 (377)
T ss_dssp             EEGGGSCHHHHHHC--EEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             CCcCcCCHhHhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCC
Confidence            46779999999864  68999999999999999998 9999998887777666666665667778899999999999999


Q ss_pred             CCCCCCCHHHHhh
Q 032711           99 NPNDRPTAAQLME  111 (135)
Q Consensus        99 ~p~~Rps~~~~l~  111 (135)
                      +|.+||++.++++
T Consensus       355 dP~~Rps~~~i~~  367 (377)
T 3cbl_A          355 EPGQRPSFSTIYQ  367 (377)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             CchhCcCHHHHHH
Confidence            9999999998864

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.73  E-value=7.7e-19  Score=122.70  Aligned_cols=106  Identities=14%  Similarity=0.140  Sum_probs=79.4

Q ss_pred             hhhhhhhhh----hhcccccccccchhhhhcc--------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Q 032711            6 VEGLGNALR----RKWHVSRWNSLTDQVVNSK--------NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIA   73 (135)
Q Consensus         6 ~~~~~~~~~----~~~~~gt~~~~aPE~~~~~--------~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~   73 (135)
                      +.|+|....    ....+| +.|+|||++...        ...++.++||||+|+++|+|++|+.||...+.......+.
T Consensus       252 L~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~  330 (413)
T 3dzo_A          252 LTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIF  330 (413)
T ss_dssp             ECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGG
T ss_pred             EEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHH
Confidence            455554332    234578 999999999421        1247889999999999999999999997765332222221


Q ss_pred             cCCCCCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           74 RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        74 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                           .....++..+.+++.+||..+|.+||++.++++|+||..
T Consensus       331 -----~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          331 -----RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             -----SSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             -----hhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence                 122357799999999999999999999999999999874

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.72  E-value=9.4e-18  Score=112.77  Aligned_cols=93  Identities=22%  Similarity=0.380  Sum_probs=79.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|++.|+|||++.+.  .++.++|+||+|+++++|++ |..||.+.........+........+..++..+.+++.+||
T Consensus       212 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  289 (314)
T 2ivs_A          212 GRIPVKWMAIESLFDH--IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCW  289 (314)
T ss_dssp             CCSCGGGCCHHHHHHC--EECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCcccccChhhhcCC--CcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHc
Confidence            3567889999999874  68999999999999999999 99999887766666666666555667788999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..+|.+||++.+++++
T Consensus       290 ~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          290 KQEPDKRPVFADISKD  305 (314)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCChhhCcCHHHHHHH
Confidence            9999999999998753

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.72  E-value=1.5e-17  Score=112.67  Aligned_cols=93  Identities=22%  Similarity=0.387  Sum_probs=79.3

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+++.|+|||++...  .++.++|+||+|++++++++ |..||.+.+.......+..+.....+..++..+.+++.+||
T Consensus       201 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  278 (327)
T 1fvr_A          201 GRLPVRWMAIESLNYS--VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCW  278 (327)
T ss_dssp             --CCTTTCCHHHHHHC--EECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHT
T ss_pred             CCCCccccChhhhccc--cCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHc
Confidence            3567889999999874  57999999999999999998 99999988877777777666555667788999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..+|.+||++.+++++
T Consensus       279 ~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          279 REKPYERPSFAQILVS  294 (327)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCChhhCcCHHHHHHH
Confidence            9999999999988753

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.72  E-value=1.9e-17  Score=116.84  Aligned_cols=92  Identities=21%  Similarity=0.359  Sum_probs=79.2

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..++..|+|||++...  .++.++||||+|+++|++++ |..||.+....+....+..+.....+..++..+.+++.+||
T Consensus       346 ~~~~~~y~aPE~~~~~--~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl  423 (450)
T 1k9a_A          346 GKLPVKWTAPEALREK--KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCW  423 (450)
T ss_dssp             -CCCTTTSCHHHHHSS--CCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCCcceeCHHHhcCC--CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHc
Confidence            3668899999999874  68999999999999999998 99999887766666667666556677889999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      ..+|.+||++.+++.
T Consensus       424 ~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          424 HLDAATRPTFLQLRE  438 (450)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCChhHCcCHHHHHH
Confidence            999999999998864

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.72  E-value=4.8e-18  Score=116.01  Aligned_cols=94  Identities=13%  Similarity=0.091  Sum_probs=70.3

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--cHHHHHH---HHHcCCCC-----CCCCccc
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV--EWVQALF---KIARGELP-----PIPDSVS   85 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~--~~~~~~~---~i~~~~~~-----~~~~~~~   85 (135)
                      ....||+.|+|||++.+.  .++.++||||+|+++|++++|..||.+.  +......   ........     .....++
T Consensus       218 ~~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (345)
T 2v62_A          218 KGHNGTIEFTSLDAHKGV--ALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSC  295 (345)
T ss_dssp             GCSCSCTTTCCHHHHHTC--CCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCC
T ss_pred             cccCCCccccCHHHhcCC--CCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccH
Confidence            445899999999999874  6899999999999999999999999542  2221111   11111100     0112678


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           86 RDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        86 ~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      .++.+++.+||..+|.+||++.++++
T Consensus       296 ~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          296 CEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            89999999999999999999998875

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.72  E-value=1.8e-17  Score=110.26  Aligned_cols=95  Identities=19%  Similarity=0.373  Sum_probs=75.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHHHc-CCCCCCCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--VQALFKIAR-GELPPIPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~--~~~~~~i~~-~~~~~~~~~~~~~~~~li~   93 (135)
                      ...||+.|+|||++......++.++|+||+|+++|++++|..||.....  ......+.. ......+..++..+.+++.
T Consensus       185 ~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  264 (287)
T 4f0f_A          185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIE  264 (287)
T ss_dssp             CCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHH
T ss_pred             ccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHH
Confidence            3578999999999854334578899999999999999999999976543  222333332 3334567788999999999


Q ss_pred             HhcccCCCCCCCHHHHhh
Q 032711           94 KCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~  111 (135)
                      +||..||.+||++.++++
T Consensus       265 ~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          265 LCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHTCSSGGGSCCHHHHHH
T ss_pred             HHhcCChhhCcCHHHHHH
Confidence            999999999999999875

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.71  E-value=2.4e-17  Score=112.04  Aligned_cols=93  Identities=22%  Similarity=0.373  Sum_probs=80.0

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|++.|+|||++.+.  .++.++||||+|++++++++ |..||.+....+....+........+..++..+.+++.+||
T Consensus       219 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  296 (334)
T 2pvf_A          219 GRLPVKWMAPEALFDR--VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCW  296 (334)
T ss_dssp             CCCCGGGCCHHHHHHC--EECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCcccceeChHHhcCC--CcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHc
Confidence            3567889999999874  58999999999999999999 99999888877777666666655667788999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..+|.+||++.+++++
T Consensus       297 ~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          297 HAVPSQRPTFKQLVED  312 (334)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCChhhCcCHHHHHHH
Confidence            9999999999988753

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.71  E-value=3.5e-17  Score=108.50  Aligned_cols=92  Identities=18%  Similarity=0.337  Sum_probs=77.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..++..|+|||++...  .++.++|+||+|++++++++ |..||...+..+....+..+.....+..++..+.+++.+||
T Consensus       174 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  251 (278)
T 1byg_A          174 GKLPVKWTAPEALREK--KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCW  251 (278)
T ss_dssp             --CCTTTSCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCccccccCHHHhCCC--CCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHh
Confidence            4678899999999874  68999999999999999998 99999887666666666655555667788999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      ..+|.+||++.++++
T Consensus       252 ~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          252 HLDAAMRPSFLQLRE  266 (278)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             cCChhhCCCHHHHHH
Confidence            999999999998864

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.71  E-value=1.7e-17  Score=114.57  Aligned_cols=92  Identities=18%  Similarity=0.347  Sum_probs=75.6

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|++.|+|||++...  .++.++||||+|+++|++++ |.+||.+.+..+....+..+.....+..++..+.+++.+||
T Consensus       256 ~~~~~~y~aPE~~~~~--~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl  333 (373)
T 3c1x_A          256 AKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW  333 (373)
T ss_dssp             --CCGGGSCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCcccccChHHhcCC--CCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence            4567889999999875  68999999999999999999 67788766555555556666555667778999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      ..+|.+||++.++++
T Consensus       334 ~~dp~~RPs~~ell~  348 (373)
T 3c1x_A          334 HPKAEMRPSFSELVS  348 (373)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCChhhCcCHHHHHH
Confidence            999999999998875

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.71  E-value=2.6e-17  Score=110.76  Aligned_cols=93  Identities=22%  Similarity=0.362  Sum_probs=78.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|++.|+|||++...  .++.++|+||+|++++++++ |..||.+.........+........+..++..+.+++.+||
T Consensus       209 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  286 (313)
T 3brb_A          209 AKMPVKWIAIESLADR--VYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCW  286 (313)
T ss_dssp             --CCGGGSCHHHHHSS--CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCBTTCCHHHHHHHHHTT
T ss_pred             cCCCccccCchhhcCC--CccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHc
Confidence            4567889999999874  68999999999999999999 88899887766666666666555667788999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..+|.+||++.+++.+
T Consensus       287 ~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          287 RTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             CCChhhCcCHHHHHHH
Confidence            9999999999998753

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.70  E-value=3.9e-17  Score=109.82  Aligned_cols=93  Identities=24%  Similarity=0.468  Sum_probs=76.3

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHH-HHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWV-QALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ..||+.|+|||++.+.  .++.++|+||+|++++++++ |..||.+.... .....+........+...+..+.+++.+|
T Consensus       210 ~~~t~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  287 (316)
T 2xir_A          210 ARLPLKWMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDC  287 (316)
T ss_dssp             EEECGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCcceeecCchhhccc--cccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHH
Confidence            4678899999999875  68999999999999999998 99999775532 33344444544556677899999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032711           96 LQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~  112 (135)
                      |..+|.+||++.++++|
T Consensus       288 l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          288 WHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cCCChhhCcCHHHHHHH
Confidence            99999999999999864

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.70  E-value=7.2e-17  Score=107.79  Aligned_cols=92  Identities=17%  Similarity=0.255  Sum_probs=72.9

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH----------------HHHHHHHcCCCCCCC
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV----------------QALFKIARGELPPIP   81 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~----------------~~~~~i~~~~~~~~~   81 (135)
                      ..|+..|+|||++.+.  .++.++||||+|++++++++|..|+......                .....+......+.+
T Consensus       177 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (295)
T 3ugc_A          177 GESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP  254 (295)
T ss_dssp             TTCGGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCC
T ss_pred             CCCccceeCcHHhcCC--CCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCC
Confidence            4567789999999875  6899999999999999999998887543211                122233344445667


Q ss_pred             CcccHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           82 DSVSRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        82 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      ..++.++.+++.+||..+|.+||++.++++
T Consensus       255 ~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          255 DGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            788999999999999999999999998864

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.70  E-value=5.7e-17  Score=107.44  Aligned_cols=92  Identities=23%  Similarity=0.382  Sum_probs=78.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|+..|+|||++...  .++.++|+||+|++++++++ |..||.+....+....+........+..++..+.+++.+||
T Consensus       170 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  247 (279)
T 1qpc_A          170 AKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW  247 (279)
T ss_dssp             CCCCTTTSCHHHHHHC--EECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCccCccChhhhccC--CCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHHHHHh
Confidence            3567789999999864  58999999999999999999 89999888877777777666555667788999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      ..+|.+||++.++++
T Consensus       248 ~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          248 KERPEDRPTFDYLRS  262 (279)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             ccChhhCCCHHHHHH
Confidence            999999999998865

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.70  E-value=1.1e-16  Score=107.85  Aligned_cols=94  Identities=17%  Similarity=0.360  Sum_probs=77.7

Q ss_pred             ccccccccchhhhhcc-------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC-CCcccHHHH
Q 032711           18 HVSRWNSLTDQVVNSK-------NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI-PDSVSRDAR   89 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~-------~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~   89 (135)
                      ..|++.|+|||++...       ...++.++||||+|++++++++|..||...........+.....+.. +..++.++.
T Consensus       194 ~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  273 (319)
T 2y4i_B          194 QNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEIS  273 (319)
T ss_dssp             CSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHH
T ss_pred             CCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHH
Confidence            4689999999999752       13478899999999999999999999998887777766665544332 335778899


Q ss_pred             HHHHHhcccCCCCCCCHHHHhh
Q 032711           90 DFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      +++.+||..+|.+||++.++++
T Consensus       274 ~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          274 DILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             HHHHHHHCSSTTTSCCHHHHHH
T ss_pred             HHHHHHhcCChhhCcCHHHHHH
Confidence            9999999999999999999875

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.70  E-value=7e-17  Score=116.10  Aligned_cols=98  Identities=21%  Similarity=0.371  Sum_probs=83.3

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..++..|+|||++...  .++.++||||+|+++|+|++ |..||.+....+....+..+...+.+..++..+.+++.+||
T Consensus       424 ~~~~~~y~aPE~~~~~--~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  501 (535)
T 2h8h_A          424 AKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW  501 (535)
T ss_dssp             TTSCGGGSCHHHHHHC--CCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CcCcccccCHHHhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence            3567789999999874  68999999999999999999 89999988877777777766555667788999999999999


Q ss_pred             ccCCCCCCCHHHHhh--CcCCCC
Q 032711           97 QVNPNDRPTAAQLME--HPFVKR  117 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~--~~~~~~  117 (135)
                      ..+|.+||++++++.  ..++..
T Consensus       502 ~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          502 RKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             CSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             CCChhHCcCHHHHHHHHHHHhhc
Confidence            999999999999875  345544

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.70  E-value=5.7e-17  Score=107.83  Aligned_cols=91  Identities=20%  Similarity=0.399  Sum_probs=77.3

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .|++.|+|||++...  .++.++|+||+|++++++++ |..||.+.+.......+........+..++..+.+++.+||.
T Consensus       173 ~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  250 (288)
T 3kfa_A          173 KFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ  250 (288)
T ss_dssp             EECGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             ccccCcCChhhhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHhC
Confidence            467789999999875  68999999999999999999 999998776655555565555556677889999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++++
T Consensus       251 ~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          251 WNPSDRPSFAEIHQ  264 (288)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999998865

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.70  E-value=2.9e-17  Score=111.79  Aligned_cols=93  Identities=18%  Similarity=0.322  Sum_probs=75.6

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHH-HHcCCCCCCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFK-IARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ..||+.|+|||++.+.  .++.++||||+|+++++|++ |..||.+......... +........+...+..+.+++.+|
T Consensus       234 ~~~t~~y~aPE~~~~~--~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  311 (344)
T 1rjb_A          234 ARLPVKWMAPESLFEG--IYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSC  311 (344)
T ss_dssp             EEECGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccCccCccCHHHhccC--CCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            4567889999999874  68999999999999999998 9999977654333333 333434455677899999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032711           96 LQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~  112 (135)
                      |..+|.+||++.+++++
T Consensus       312 l~~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          312 WAFDSRKRPSFPNLTSF  328 (344)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cCCCchhCcCHHHHHHH
Confidence            99999999999998864

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.70  E-value=2.5e-17  Score=109.59  Aligned_cols=92  Identities=25%  Similarity=0.498  Sum_probs=76.9

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCC-CCCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGEL-PPIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~li~~~   95 (135)
                      ..|+..|+|||++...  .++.++|+||+|++++++++ |..||.+.+.......+..... .+.+..++..+.+++.+|
T Consensus       184 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  261 (291)
T 1u46_A          184 RKVPFAWCAPESLKTR--TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQC  261 (291)
T ss_dssp             --CCGGGCCHHHHHHC--EEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCCceeeCchhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHH
Confidence            4577789999999874  57899999999999999999 9999998887777666654432 345567889999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032711           96 LQVNPNDRPTAAQLME  111 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~  111 (135)
                      |..+|.+||++.++++
T Consensus       262 l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          262 WAHKPEDRPTFVALRD  277 (291)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             ccCCcccCcCHHHHHH
Confidence            9999999999999875

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.70  E-value=5e-17  Score=108.41  Aligned_cols=94  Identities=13%  Similarity=0.117  Sum_probs=70.9

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH---HHHHHHHH----cCCCCCCCCcccHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---VQALFKIA----RGELPPIPDSVSRDA   88 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~---~~~~~~i~----~~~~~~~~~~~~~~~   88 (135)
                      ....||+.|+|||++.+.  .++.++||||+|++++++++|+.||.+...   ...+..+.    ..........++..+
T Consensus       173 ~~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  250 (296)
T 3uzp_A          173 KNLTGTARYASINTHLGI--EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEF  250 (296)
T ss_dssp             CCCCSCTTTCCHHHHTTC--CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHH
T ss_pred             cccccccccCChhhhcCC--CCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHH
Confidence            345799999999999875  589999999999999999999999975321   11111111    111111235678999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhh
Q 032711           89 RDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        89 ~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      .+++.+||..+|.+||++.++++
T Consensus       251 ~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          251 ATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhcCcCcCCCHHHHHH
Confidence            99999999999999999988764

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.70  E-value=6.6e-17  Score=108.04  Aligned_cols=93  Identities=18%  Similarity=0.329  Sum_probs=76.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...||+.|+|||.+.+.  .++.++|+||+|++++++++ +.+||...+..+....+........+..++..+.+++.+|
T Consensus       191 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  268 (298)
T 3f66_A          191 GAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC  268 (298)
T ss_dssp             -CCBCGGGSCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCCCccccChHHhcCC--CCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHH
Confidence            34677889999999875  68999999999999999999 6667766665556666666665566777899999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032711           96 LQVNPNDRPTAAQLME  111 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~  111 (135)
                      |..+|.+||++.++++
T Consensus       269 l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          269 WHPKAEMRPSFSELVS  284 (298)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             cCCChhhCcCHHHHHH
Confidence            9999999999998875

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.70  E-value=3.9e-17  Score=109.01  Aligned_cols=93  Identities=11%  Similarity=0.088  Sum_probs=71.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc---HHHHHHHHHcC----CCCCCCCcccHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WVQALFKIARG----ELPPIPDSVSRDAR   89 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~---~~~~~~~i~~~----~~~~~~~~~~~~~~   89 (135)
                      ...||+.|+|||++.+.  .++.++||||+|++++++++|..||.+.+   ....+..+...    ........++..+.
T Consensus       177 ~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  254 (298)
T 1csn_A          177 NLSGTARYMSINTHLGR--EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFY  254 (298)
T ss_dssp             CCCSCTTTCCHHHHTTC--CCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHH
T ss_pred             CCCCCcccCCchhhcCC--CCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHH
Confidence            45799999999999774  68999999999999999999999997632   23333332211    11122346789999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhh
Q 032711           90 DFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      +++.+||..+|.+||++.++++
T Consensus       255 ~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          255 KYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHhcCCcccCCCHHHHHH
Confidence            9999999999999999988764

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.69  E-value=1.8e-17  Score=111.87  Aligned_cols=98  Identities=16%  Similarity=0.235  Sum_probs=72.9

Q ss_pred             cccccccccchhhhhcc------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHHHcCCCC--------
Q 032711           17 WHVSRWNSLTDQVVNSK------NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WVQALFKIARGELP--------   78 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~------~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~----~~~~~~~i~~~~~~--------   78 (135)
                      ...||..|+|||++...      ...++.++||||+|+++|++++|..||....    ..+....+..+...        
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  253 (319)
T 4euu_A          174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQK  253 (319)
T ss_dssp             CCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEEC
T ss_pred             ecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhc
Confidence            45799999999998731      2368899999999999999999999996422    23344444332211        


Q ss_pred             ----------------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcC
Q 032711           79 ----------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF  114 (135)
Q Consensus        79 ----------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~  114 (135)
                                      .....++..+.+++.+||..||.+|+++.++++|+-
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          254 AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             STTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             ccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence                            111234567889999999999999999999998863

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.69  E-value=5.8e-17  Score=108.03  Aligned_cols=93  Identities=12%  Similarity=0.108  Sum_probs=70.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH---HHHHHH----HcCCCCCCCCcccHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV---QALFKI----ARGELPPIPDSVSRDAR   89 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~---~~~~~i----~~~~~~~~~~~~~~~~~   89 (135)
                      ...||+.|+|||++.+.  .++.++||||+|++++++++|..||.+.+..   .....+    ...........++..+.
T Consensus       174 ~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  251 (296)
T 4hgt_A          174 NLTGTARYASINTHLGI--EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFA  251 (296)
T ss_dssp             CCCSCGGGCCHHHHTTC--CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHH
T ss_pred             ccCCCccccchHHhcCC--CCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHH
Confidence            45799999999999875  6899999999999999999999999763211   111111    11111112245688999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhh
Q 032711           90 DFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      +++.+||..+|.+||++.++++
T Consensus       252 ~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          252 TYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHHhcCCCCCCCHHHHHH
Confidence            9999999999999999988764

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.69  E-value=1.3e-16  Score=106.69  Aligned_cols=95  Identities=18%  Similarity=0.282  Sum_probs=72.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC----CCCcccHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP----IPDSVSRDARDFI   92 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~li   92 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++|++++|..||.+.+.............+.    .+..++..+.+++
T Consensus       171 ~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  248 (294)
T 4eqm_A          171 HVLGTVQYFSPEQAKGE--ATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVI  248 (294)
T ss_dssp             ----CCSSCCHHHHHTC--CCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHH
T ss_pred             ccccCccccCHhHhcCC--CCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHH
Confidence            45799999999999875  68899999999999999999999999888766655555444322    2456789999999


Q ss_pred             HHhcccCCCCCCCHHHHhhCc
Q 032711           93 LKCLQVNPNDRPTAAQLMEHP  113 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~  113 (135)
                      .+||..+|.+||+..+.+.+.
T Consensus       249 ~~~l~~dp~~R~~~~~~l~~~  269 (294)
T 4eqm_A          249 LRATEKDKANRYKTIQEMKDD  269 (294)
T ss_dssp             HHHSCSSGGGSCSSHHHHHHH
T ss_pred             HHHhcCCHhHccccHHHHHHH
Confidence            999999999999444444333

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.69  E-value=4.2e-17  Score=116.29  Aligned_cols=91  Identities=20%  Similarity=0.399  Sum_probs=77.6

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .++..|+|||++...  .++.++||||+|+++|+|++ |..||.+.+.......+........+..++..+.+++.+||.
T Consensus       380 ~~~~~y~aPE~~~~~--~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  457 (495)
T 1opk_A          380 KFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ  457 (495)
T ss_dssp             CCCGGGCCHHHHHHC--EECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             cCCcceeCHhHHhcC--CCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            456789999999874  68999999999999999998 999998877666665666555556677889999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .+|.+||++.++++
T Consensus       458 ~dP~~RPs~~el~~  471 (495)
T 1opk_A          458 WNPSDRPSFAEIHQ  471 (495)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             cChhHCcCHHHHHH
Confidence            99999999999875

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.69  E-value=1.3e-16  Score=106.42  Aligned_cols=93  Identities=22%  Similarity=0.357  Sum_probs=76.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCC-CCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~-~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...|+..|+|||.+.+.  .++.++|+||+|++++++++|. ++|...+.......+........+...+..+.+++.+|
T Consensus       187 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  264 (298)
T 3pls_A          187 HARLPVKWTALESLQTY--RFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQC  264 (298)
T ss_dssp             CTTCGGGGSCHHHHTTC--CCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCCCccccChhhhccC--CCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHH
Confidence            34678899999999874  6899999999999999999954 55555555555555666655566777899999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032711           96 LQVNPNDRPTAAQLME  111 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~  111 (135)
                      |..+|.+||++.++++
T Consensus       265 l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          265 WEADPAVRPTFRVLVG  280 (298)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             ccCChhhCcCHHHHHH
Confidence            9999999999998764

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.69  E-value=1.3e-16  Score=117.11  Aligned_cols=92  Identities=22%  Similarity=0.449  Sum_probs=80.3

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..|++.|+|||++...  .++.++||||+|++++++++ |..||.+.+..+....+..+...+.+..++..+.+++.+||
T Consensus       552 ~~~t~~y~aPE~~~~~--~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l  629 (656)
T 2j0j_A          552 GKLPIKWMAPESINFR--RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW  629 (656)
T ss_dssp             --CCGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCCcceeCHHHhcCC--CCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHc
Confidence            4567889999999875  68999999999999999997 99999988888877777777666778889999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      ..+|.+||++.++++
T Consensus       630 ~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          630 AYDPSRRPRFTELKA  644 (656)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCChhHCcCHHHHHH
Confidence            999999999998874

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.68  E-value=1.8e-16  Score=105.69  Aligned_cols=95  Identities=16%  Similarity=0.405  Sum_probs=71.6

Q ss_pred             cccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHH-HHHHcCCCC----CCCCcccHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQAL-FKIARGELP----PIPDSVSRDARD   90 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~-~~i~~~~~~----~~~~~~~~~~~~   90 (135)
                      ...||+.|+|||++... ...++.++||||+|++++++++|..||.+....... ..+......    .....++..+.+
T Consensus       181 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  260 (289)
T 3og7_A          181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR  260 (289)
T ss_dssp             ---CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHH
T ss_pred             ccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHH
Confidence            35789999999998632 235788999999999999999999999875544333 333333322    234467899999


Q ss_pred             HHHHhcccCCCCCCCHHHHhh
Q 032711           91 FILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        91 li~~~l~~~p~~Rps~~~~l~  111 (135)
                      ++.+||..+|.+||++.++++
T Consensus       261 li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          261 LMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCChhhCCCHHHHHH
Confidence            999999999999999999875

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.68  E-value=1.2e-16  Score=107.33  Aligned_cols=92  Identities=21%  Similarity=0.387  Sum_probs=73.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHH-HHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALF-KIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ..||+.|+|||++.+.  .++.++|+||+|+++++|++ |..||.+........ .+........+...+..+.+++.+|
T Consensus       207 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  284 (313)
T 1t46_A          207 ARLPVKWMAPESIFNC--VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTC  284 (313)
T ss_dssp             SEECGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHH
T ss_pred             CCCcceeeChHHhcCC--CCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHH
Confidence            3567789999999874  68999999999999999998 999997765433333 2333333345667889999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032711           96 LQVNPNDRPTAAQLME  111 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~  111 (135)
                      |..+|.+||++.++++
T Consensus       285 l~~dp~~Rps~~ell~  300 (313)
T 1t46_A          285 WDADPLKRPTFKQIVQ  300 (313)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             cCCCchhCcCHHHHHH
Confidence            9999999999999875

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.67  E-value=7.2e-17  Score=109.43  Aligned_cols=92  Identities=20%  Similarity=0.380  Sum_probs=73.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHH-HcCCCCCCCCcccHHHHHHHHHh
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKI-ARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ..||+.|+|||++.+.  .++.++||||+|+++++|++ |..||.+.........+ ........+...+..+.+++.+|
T Consensus       226 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  303 (333)
T 2i1m_A          226 ARLPVKWMAPESIFDC--VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQAC  303 (333)
T ss_dssp             CEECGGGSCHHHHHHC--CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCCccccCHHHhccC--CCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            4567789999999875  68999999999999999998 88999776543333333 33333445667789999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032711           96 LQVNPNDRPTAAQLME  111 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~  111 (135)
                      |..+|.+||++.++++
T Consensus       304 l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          304 WALEPTHRPTFQQICS  319 (333)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             hccChhhCcCHHHHHH
Confidence            9999999999999875

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.67  E-value=4.3e-17  Score=110.41  Aligned_cols=92  Identities=20%  Similarity=0.363  Sum_probs=73.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH---------------HHHHHHHHcCCCCCCCC
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW---------------VQALFKIARGELPPIPD   82 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~---------------~~~~~~i~~~~~~~~~~   82 (135)
                      ..||..|+|||++.+.  .++.++||||+|++++++++|..||.....               ......+........+.
T Consensus       190 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (327)
T 3lxl_A          190 GQSPIFWYAPESLSDN--IFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPP  267 (327)
T ss_dssp             CCSCGGGSCHHHHHHC--EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCT
T ss_pred             CCccccccCHHHhccC--CCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCC
Confidence            4578889999999875  579999999999999999999998855332               12223334444456677


Q ss_pred             cccHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           83 SVSRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        83 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      .++..+.+++.+||..+|.+||++.++++
T Consensus       268 ~~~~~l~~li~~~l~~dP~~Rps~~ell~  296 (327)
T 3lxl_A          268 ACPAEVHELMKLCWAPSPQDRPSFSALGP  296 (327)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            88999999999999999999999999864

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.67  E-value=4.9e-16  Score=104.38  Aligned_cols=93  Identities=27%  Similarity=0.602  Sum_probs=70.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHHHcCCCCCCC-CcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WVQALFKIARGELPPIP-DSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~--~~~~~~~i~~~~~~~~~-~~~~~~~~~li~   93 (135)
                      ...|+..|+|||++...  .++.++|+|++|++++++++|..||.+..  .......+........+ ..++.++.+++.
T Consensus       195 ~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  272 (310)
T 2wqm_A          195 SLVGTPYYMSPERIHEN--GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVN  272 (310)
T ss_dssp             ----CCSSCCHHHHTTC--CCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHH
T ss_pred             ccCCCeeEeChHHhCCC--CCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHH
Confidence            35789999999999864  68999999999999999999999996542  23344445444443333 567899999999


Q ss_pred             HhcccCCCCCCCHHHHhh
Q 032711           94 KCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~  111 (135)
                      +||..||.+||++.++++
T Consensus       273 ~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          273 MCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             HHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCChhhCCCHHHHHH
Confidence            999999999999998875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.66  E-value=7.8e-17  Score=107.21  Aligned_cols=92  Identities=17%  Similarity=0.363  Sum_probs=70.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..||..|+|||++.+. ..++.++||||+|++++++++| .+|+...+...........  ...+...+.++.+++.+||
T Consensus       177 ~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l  253 (289)
T 4fvq_A          177 LQERIPWVPPECIENP-KNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR--HQLPAPKAAELANLINNCM  253 (289)
T ss_dssp             HHHTTTTSCHHHHHCG-GGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT--CCCCCCSSCTTHHHHHHHS
T ss_pred             cCCcCcccCHHHhCCC-CCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhcc--CCCCCCCCHHHHHHHHHHc
Confidence            4688899999999863 2589999999999999999995 4555555544443333222  2345556778999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..||.+||++.+++++
T Consensus       254 ~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          254 DYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             CCChhHCcCHHHHHHH
Confidence            9999999999999863

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.66  E-value=5.8e-17  Score=111.35  Aligned_cols=93  Identities=11%  Similarity=0.084  Sum_probs=68.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHHH---cCCCC------CCCCcccH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIA---RGELP------PIPDSVSR   86 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~-~~~~~~i~---~~~~~------~~~~~~~~   86 (135)
                      ..+||+.|+|||++.+.  .++.++||||+|+++|+|++|..||.+... ........   .....      .....++.
T Consensus       220 ~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (364)
T 3op5_A          220 CHDGTIEFTSIDAHNGV--APSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPG  297 (364)
T ss_dssp             CCCCCTTTCCHHHHTTC--CCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCH
T ss_pred             ccCCCCCccCHHHhCCC--CCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHH
Confidence            34599999999999875  589999999999999999999999975321 11110000   00000      01245688


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           87 DARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        87 ~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      ++.+++..||..+|.+||++.++++
T Consensus       298 ~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          298 EIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            9999999999999999999987753

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.66  E-value=2.5e-16  Score=106.80  Aligned_cols=93  Identities=12%  Similarity=0.129  Sum_probs=69.9

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---cHHHHHHHHHcCCCC----CCCCcccHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV---EWVQALFKIARGELP----PIPDSVSRDA   88 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~---~~~~~~~~i~~~~~~----~~~~~~~~~~   88 (135)
                      ...+||+.|+|||++.+.  .++.++|+||+|+++++|++|..||.+.   ...+.+..+......    ......+ ++
T Consensus       175 ~~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~  251 (330)
T 2izr_A          175 KSLTGTARYMSINTHLGK--EQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EM  251 (330)
T ss_dssp             CCCCSCTTTCCHHHHTTC--CCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HH
T ss_pred             CCcCCCccccChHHHcCC--CCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HH
Confidence            356899999999999874  6899999999999999999999999763   333333333221110    0112244 89


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhh
Q 032711           89 RDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        89 ~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      .+++.+||..+|.+||++.++.+
T Consensus       252 ~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          252 ATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCCHHHHHH
Confidence            99999999999999999887654

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.66  E-value=4.4e-17  Score=110.30  Aligned_cols=93  Identities=22%  Similarity=0.268  Sum_probs=54.1

Q ss_pred             cccccccccchhhhhc-cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNS-KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~-~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...||+.|+|||++.. ....++.++||||+|++++++++|..||...........   ....+.+...+..+.+++.+|
T Consensus       209 ~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~  285 (337)
T 3ll6_A          209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG---KYSIPPHDTQYTVFHSLIRAM  285 (337)
T ss_dssp             ---------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------------CCCCTTCCSSGGGHHHHHHH
T ss_pred             cccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcC---cccCCcccccchHHHHHHHHH
Confidence            4468999999999842 123578999999999999999999999976544332221   111233455667789999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032711           96 LQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~  112 (135)
                      |..+|.+||++.+++++
T Consensus       286 l~~~p~~Rps~~e~l~~  302 (337)
T 3ll6_A          286 LQVNPEERLSIAEVVHQ  302 (337)
T ss_dssp             SCSSGGGSCCHHHHHHH
T ss_pred             ccCChhhCcCHHHHHHH
Confidence            99999999999999875

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.65  E-value=5.2e-16  Score=106.14  Aligned_cols=91  Identities=14%  Similarity=0.161  Sum_probs=69.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc--HHHHHHH---HHcCCCCCC------CCcccH
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WVQALFK---IARGELPPI------PDSVSR   86 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~--~~~~~~~---i~~~~~~~~------~~~~~~   86 (135)
                      ..||+.|+|||++.+.  .++.++||||+|+++|+|++|..||....  .......   +..... ..      ...++.
T Consensus       228 ~~gt~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  304 (352)
T 2jii_A          228 HEGDLEFISMDLHKGC--GPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPG-PFVGPCGHWIRPSE  304 (352)
T ss_dssp             TCSCTTTCCHHHHTTC--CCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCC-CEECTTSCEECCCH
T ss_pred             ccCCccccCHHHHccC--CCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChh-hhhhhccccCCCcH
Confidence            4899999999999874  68999999999999999999999997653  2222211   111111 11      124689


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           87 DARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        87 ~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      .+.+++.+||..+|.+||+++++++
T Consensus       305 ~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          305 TLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             HHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHHhCChhhCCCHHHHHH
Confidence            9999999999999999999998754

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.65  E-value=3.9e-16  Score=105.03  Aligned_cols=93  Identities=20%  Similarity=0.257  Sum_probs=69.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--CCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--PPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~li~~   94 (135)
                      ...|++.|+|||++.+.  .++.++|+|++|++++++++|..||.+.+.......+.....  ...+..++..+.+++.+
T Consensus       194 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  271 (309)
T 2h34_A          194 NTVGTLYYMAPERFSES--HATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIAR  271 (309)
T ss_dssp             ---CCGGGCCGGGTCC------CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHH
T ss_pred             ccCCCcCccCHHHHcCC--CCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHH
Confidence            45789999999999764  678999999999999999999999988765543333333322  12345678899999999


Q ss_pred             hcccCCCCCC-CHHHHhh
Q 032711           95 CLQVNPNDRP-TAAQLME  111 (135)
Q Consensus        95 ~l~~~p~~Rp-s~~~~l~  111 (135)
                      ||..+|.+|| ++++++.
T Consensus       272 ~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          272 GMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             HTCSSGGGSCSSHHHHHH
T ss_pred             hccCCHHHHHHhHHHHHH
Confidence            9999999999 8887764

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.65  E-value=1.3e-16  Score=107.79  Aligned_cols=93  Identities=23%  Similarity=0.334  Sum_probs=73.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH---------------HHHHHHHcCCCCCCC
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV---------------QALFKIARGELPPIP   81 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~---------------~~~~~i~~~~~~~~~   81 (135)
                      ...|+..|+|||++.+.  .++.++|+||+|++++++++|..||......               .....+......+.+
T Consensus       196 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (318)
T 3lxp_A          196 DGDSPVFWYAPECLKEY--KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRP  273 (318)
T ss_dssp             -CCCCGGGCCHHHHHHC--EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCC
T ss_pred             CCCCCceeeChHHhcCC--CCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCC
Confidence            34678889999999874  5889999999999999999999998653211               112223344445667


Q ss_pred             CcccHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           82 DSVSRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        82 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      ..++..+.+++.+||..+|.+||++.++++
T Consensus       274 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          274 DKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            788999999999999999999999998874

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.64  E-value=2e-16  Score=105.77  Aligned_cols=93  Identities=20%  Similarity=0.358  Sum_probs=73.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------------cH-HHHHHHHHcCCCCCCC
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV--------------EW-VQALFKIARGELPPIP   81 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~--------------~~-~~~~~~i~~~~~~~~~   81 (135)
                      ...||..|+|||++.+.  .++.++|+||+|++++++++|..|+...              .. ......+........+
T Consensus       188 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (302)
T 4e5w_A          188 DRDSPVFWYAPECLMQS--KFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCP  265 (302)
T ss_dssp             CTTCCGGGCCHHHHHHC--EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCC
T ss_pred             CCCCCccccCCeeecCC--CCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCC
Confidence            34678889999999875  6889999999999999999998765321              11 2223334444445667


Q ss_pred             CcccHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           82 DSVSRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        82 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      ..++..+.+++.+||..||.+||++.++++
T Consensus       266 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          266 PNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            788999999999999999999999999875

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.64  E-value=3.1e-16  Score=111.54  Aligned_cols=92  Identities=14%  Similarity=0.152  Sum_probs=70.9

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc---HHHHHHHHHcC----CCCCCCCcccHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WVQALFKIARG----ELPPIPDSVSRDAR   89 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~---~~~~~~~i~~~----~~~~~~~~~~~~~~   89 (135)
                      ..+||..|+|||++.+.  .++.++|||++|+++|+|++|+.||.+..   ....+..+...    ........++.++.
T Consensus       172 ~~~gt~~Y~aPE~~~~~--~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~  249 (483)
T 3sv0_A          172 NLTGTARYASVNTHLGI--EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFA  249 (483)
T ss_dssp             CCCSCTTTCCHHHHTTC--CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHH
T ss_pred             ccCCCccccCHHHhcCC--CCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHH
Confidence            56799999999999875  68999999999999999999999997643   22233222211    11122245788999


Q ss_pred             HHHHHhcccCCCCCCCHHHHh
Q 032711           90 DFILKCLQVNPNDRPTAAQLM  110 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps~~~~l  110 (135)
                      +++.+||..+|.+||++.+++
T Consensus       250 ~li~~cl~~dP~~RPs~~el~  270 (483)
T 3sv0_A          250 SYFHYCRSLRFDDKPDYSYLK  270 (483)
T ss_dssp             HHHHHHHTCCTTCCCCHHHHH
T ss_pred             HHHHHHhcCChhhCcCHHHHH
Confidence            999999999999999998764

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.64  E-value=7.1e-17  Score=109.07  Aligned_cols=93  Identities=17%  Similarity=0.205  Sum_probs=68.5

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH------HHH-HHHHcCCCC---------CCC
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV------QAL-FKIARGELP---------PIP   81 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~------~~~-~~i~~~~~~---------~~~   81 (135)
                      ..||+.|+|||++.+.  .++.++||||+|++++++++|+.||.+....      ... .........         ..+
T Consensus       201 ~~gt~~y~aPE~~~~~--~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (321)
T 2qkw_B          201 VKGTLGYIDPEYFIKG--RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIR  278 (321)
T ss_dssp             CEEETTTCCHHHHHHC--BCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSC
T ss_pred             cCCCccccCHHHhcCC--CCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccC
Confidence            4689999999999874  6899999999999999999999998653211      111 111111110         112


Q ss_pred             CcccHHHHHHHHHhcccCCCCCCCHHHHhhC
Q 032711           82 DSVSRDARDFILKCLQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        82 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~  112 (135)
                      ...+..+.+++.+||..||.+||++.+++++
T Consensus       279 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          279 PESLRKFGDTAVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             HHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            3345678899999999999999999999864

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.63  E-value=3.3e-16  Score=105.98  Aligned_cols=94  Identities=17%  Similarity=0.213  Sum_probs=66.5

Q ss_pred             ccccccccchhhhhccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCc----------------HHHHHHHHHcCCCC
Q 032711           18 HVSRWNSLTDQVVNSKN---GGYGLPADIWSVGCTVLEMLTRCRPYFGVE----------------WVQALFKIARGELP   78 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~---~~~~~~~dvws~G~~l~~l~~g~~p~~~~~----------------~~~~~~~i~~~~~~   78 (135)
                      .+||+.|+|||++.+..   ..++.++||||+|+++|++++|+.||.+..                .......+......
T Consensus       193 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (322)
T 3soc_A          193 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKR  272 (322)
T ss_dssp             CCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCC
T ss_pred             CccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCC
Confidence            57999999999997631   134567899999999999999999986431                11222222222221


Q ss_pred             C-CCC-----cccHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           79 P-IPD-----SVSRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        79 ~-~~~-----~~~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      + .+.     ..+..+.+++.+||..||.+||++.++++
T Consensus       273 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          273 PVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             CCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            1 111     23456899999999999999999999875

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.63  E-value=8.5e-16  Score=102.64  Aligned_cols=94  Identities=22%  Similarity=0.387  Sum_probs=67.2

Q ss_pred             ccccccccchhhhhccCC----CCCchhhHHHHHHHHHHHHhC----------CCCCCCCc----HHHHHHHHH-cC-CC
Q 032711           18 HVSRWNSLTDQVVNSKNG----GYGLPADIWSVGCTVLEMLTR----------CRPYFGVE----WVQALFKIA-RG-EL   77 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~----~~~~~~dvws~G~~l~~l~~g----------~~p~~~~~----~~~~~~~i~-~~-~~   77 (135)
                      .+||+.|+|||++.+...    .++.++||||+|+++|+|++|          ..||....    ......... .. ..
T Consensus       177 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~  256 (301)
T 3q4u_A          177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQR  256 (301)
T ss_dssp             CCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC
T ss_pred             cccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCC
Confidence            489999999999986421    234689999999999999999          78885421    122222222 11 11


Q ss_pred             CCCC-----CcccHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           78 PPIP-----DSVSRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        78 ~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      +..+     ...+..+.+++.+||..||.+||++.++++
T Consensus       257 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          257 PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             CCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            2222     224578999999999999999999999875

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.62  E-value=3.4e-16  Score=105.41  Aligned_cols=96  Identities=17%  Similarity=0.249  Sum_probs=70.6

Q ss_pred             cccccccccchhhhhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH--HHHHHHHcCCCCCCCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV--QALFKIARGELPPIPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~-~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~li~   93 (135)
                      ...||+.|+|||++.... ..++.++|||++|++++++++|..||......  .....+......+.+..++..+.+++.
T Consensus       202 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  281 (317)
T 2buj_A          202 AQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLN  281 (317)
T ss_dssp             HHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHH
T ss_pred             cccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHH
Confidence            346799999999987531 12688999999999999999999998532110  111222222223344567899999999


Q ss_pred             HhcccCCCCCCCHHHHhhC
Q 032711           94 KCLQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~  112 (135)
                      +||..+|.+||++.+++++
T Consensus       282 ~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          282 SMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHhhcChhhCCCHHHHHHH
Confidence            9999999999999999864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.62  E-value=1.5e-15  Score=102.02  Aligned_cols=90  Identities=16%  Similarity=0.233  Sum_probs=68.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHH-----HHHHHHcCCCCCCCCcccHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQ-----ALFKIARGELPPIPDSVSRDARDF   91 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~l   91 (135)
                      ..+||+.|+|||++.+.  .++.++||||+|++++++++|..|+.......     ........   ..+..++..+.++
T Consensus       181 ~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l  255 (310)
T 3s95_A          181 TVVGNPYWMAPEMINGR--SYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR---YCPPNCPPSFFPI  255 (310)
T ss_dssp             CCCSCGGGCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH---TCCTTCCTTHHHH
T ss_pred             ccCCCcceeCHHHhcCC--CCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc---cCCCCCCHHHHHH
Confidence            56899999999999874  68999999999999999999988875421100     00000000   2345677889999


Q ss_pred             HHHhcccCCCCCCCHHHHhh
Q 032711           92 ILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        92 i~~~l~~~p~~Rps~~~~l~  111 (135)
                      +.+||..||.+||++.++++
T Consensus       256 i~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          256 TVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHH
Confidence            99999999999999998865

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.62  E-value=2e-16  Score=106.13  Aligned_cols=92  Identities=16%  Similarity=0.184  Sum_probs=68.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHH----HHHHHHc----------CCCCCCCC
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQ----ALFKIAR----------GELPPIPD   82 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~----~~~~i~~----------~~~~~~~~   82 (135)
                      ...||+.|+|||++.+   .++.++|+||+|++++++++|..||.......    ....+..          ......+.
T Consensus       194 ~~~g~~~y~aPE~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (307)
T 2nru_A          194 RIVGTTAYMAPEALRG---EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADS  270 (307)
T ss_dssp             SCCSCGGGCCHHHHTT---EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCH
T ss_pred             ccCCCcCcCChHHhcC---CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccch
Confidence            3578999999999865   47899999999999999999999997643211    1111111          11112233


Q ss_pred             cccHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           83 SVSRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        83 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      ..+..+.+++.+||..+|.+||++.++++
T Consensus       271 ~~~~~l~~li~~cl~~~p~~Rps~~~l~~  299 (307)
T 2nru_A          271 TSVEAMYSVASQCLHEKKNKRPDIKKVQQ  299 (307)
T ss_dssp             HHHHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            45677889999999999999999999875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.62  E-value=5.7e-16  Score=102.65  Aligned_cols=95  Identities=20%  Similarity=0.422  Sum_probs=74.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ...|++.|+|||++.+.  .++.++|+|++|++++++++|..|+...  ......+...   ..+..++..+.+++.+||
T Consensus       180 ~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~li~~~l  252 (284)
T 2a19_B          180 RSKGTLRYMSPEQISSQ--DYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRDG---IISDIFDKKEKTLLQKLL  252 (284)
T ss_dssp             CCCSCCTTSCHHHHHCS--CCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHHTT---CCCTTSCHHHHHHHHHHT
T ss_pred             ccCCcccccChhhhccC--CCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhhcc---cccccCCHHHHHHHHHHc
Confidence            45789999999999874  6899999999999999999998876432  2222233332   234567889999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      ..+|.+||++.+++++.+.-..
T Consensus       253 ~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          253 SKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHTC
T ss_pred             cCChhhCcCHHHHHHHHHHHhh
Confidence            9999999999999987654443

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.62  E-value=1.6e-16  Score=116.38  Aligned_cols=99  Identities=19%  Similarity=0.270  Sum_probs=72.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHH---------HH-----cCC-----C
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFK---------IA-----RGE-----L   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~---------i~-----~~~-----~   77 (135)
                      ...||+.|+|||++.+.  .++.++|+||+|+++|++++|..||...........         +.     .+.     .
T Consensus       182 ~~~gt~~Y~APE~l~~~--~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~  259 (676)
T 3qa8_A          182 EFVGTLQYLAPELLEQK--KYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSV  259 (676)
T ss_dssp             CCCSCCTTCSSCSSCCS--CCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSS
T ss_pred             cccCCcccCChHHhccC--CCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccc
Confidence            45789999999999764  689999999999999999999999976543221100         00     000     0


Q ss_pred             CC----CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           78 PP----IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        78 ~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      .+    ....++..+.+++.+||..||.+||++.+++.|+||..
T Consensus       260 lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          260 LPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             SCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             cCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence            01    12235788999999999999999999999999999874

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.61  E-value=2.6e-15  Score=101.69  Aligned_cols=94  Identities=22%  Similarity=0.343  Sum_probs=66.5

Q ss_pred             cccccccccchhhhhccCCCCCc------hhhHHHHHHHHHHHHhC----------CCCCCCCc----HHHHHHH-HHcC
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGL------PADIWSVGCTVLEMLTR----------CRPYFGVE----WVQALFK-IARG   75 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~------~~dvws~G~~l~~l~~g----------~~p~~~~~----~~~~~~~-i~~~   75 (135)
                      ..+||+.|+|||++.+.  .+..      ++||||+|+++|+|++|          ..||....    ....... +...
T Consensus       205 ~~~gt~~y~aPE~~~~~--~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  282 (337)
T 3mdy_A          205 TRVGTKRYMPPEVLDES--LNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIK  282 (337)
T ss_dssp             SSCSCGGGCCHHHHTTC--CCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS
T ss_pred             CCccCcceeChhhcccc--cCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhh
Confidence            45799999999999864  3333      39999999999999999          66765421    1122222 2222


Q ss_pred             CC-CCCC-----CcccHHHHHHHHHhcccCCCCCCCHHHHhhC
Q 032711           76 EL-PPIP-----DSVSRDARDFILKCLQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        76 ~~-~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~  112 (135)
                      .. +..+     ..++..+.+++.+||..||.+||++.+++++
T Consensus       283 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          283 KLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             CCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            11 2222     2456778999999999999999999998764

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.60  E-value=1.1e-15  Score=103.24  Aligned_cols=94  Identities=14%  Similarity=0.215  Sum_probs=67.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc--------HHHHHHHHHcCCC----------CC
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--------WVQALFKIARGEL----------PP   79 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~--------~~~~~~~i~~~~~----------~~   79 (135)
                      ..||+.|+|||++...  .++.++||||+|++++++++|..||....        .............          ..
T Consensus       195 ~~gt~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (326)
T 3uim_A          195 VRGTIGHIAPEYLSTG--KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGN  272 (326)
T ss_dssp             CCSCGGGCCHHHHHHS--EECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTS
T ss_pred             ccCCcCccCHHHhccC--CCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccc
Confidence            4699999999999774  58999999999999999999999995211        1111111111100          01


Q ss_pred             CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCc
Q 032711           80 IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHP  113 (135)
Q Consensus        80 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~  113 (135)
                      .+...+..+.+++.+||..+|.+||++.++++|-
T Consensus       273 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L  306 (326)
T 3uim_A          273 YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML  306 (326)
T ss_dssp             CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHh
Confidence            1223346788999999999999999999998764

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.60  E-value=1.5e-15  Score=102.78  Aligned_cols=92  Identities=17%  Similarity=0.255  Sum_probs=71.1

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH----------------HHHHHHHcCCCCCCC
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV----------------QALFKIARGELPPIP   81 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~----------------~~~~~i~~~~~~~~~   81 (135)
                      ..|+..|+|||++.+.  .++.++||||+|++++++++|..|+......                .....+......+.+
T Consensus       208 ~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (326)
T 2w1i_A          208 GESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRP  285 (326)
T ss_dssp             CSCCGGGCCHHHHHHC--EEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCC
T ss_pred             CCCceeEECchhhcCC--CCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCC
Confidence            3567789999999874  5889999999999999999998887542110                111223333334566


Q ss_pred             CcccHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           82 DSVSRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        82 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      ..++..+.+++.+||..+|.+||++.++++
T Consensus       286 ~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          286 DGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            778999999999999999999999998874

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.58  E-value=1e-15  Score=103.86  Aligned_cols=101  Identities=19%  Similarity=0.298  Sum_probs=67.4

Q ss_pred             cccccccccchhhhhccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCc-----------------HHHHHHHHH-
Q 032711           17 WHVSRWNSLTDQVVNSKN-----GGYGLPADIWSVGCTVLEMLTRCRPYFGVE-----------------WVQALFKIA-   73 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~-----~~~~~~~dvws~G~~l~~l~~g~~p~~~~~-----------------~~~~~~~i~-   73 (135)
                      ..+||+.|+|||++.+..     ..++.++||||+|+++|+|++|..||....                 ......... 
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
T 3g2f_A          187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVS  266 (336)
T ss_dssp             CTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHT
T ss_pred             cCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhc
Confidence            457999999999997521     135678999999999999999976653211                 011111111 


Q ss_pred             cCC-CCCCCC------cccHHHHHHHHHhcccCCCCCCCHHHHhh------CcCCCC
Q 032711           74 RGE-LPPIPD------SVSRDARDFILKCLQVNPNDRPTAAQLME------HPFVKR  117 (135)
Q Consensus        74 ~~~-~~~~~~------~~~~~~~~li~~~l~~~p~~Rps~~~~l~------~~~~~~  117 (135)
                      ... .+..+.      ..+..+.+++.+||..||.+||++.++++      ++|.++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~  323 (336)
T 3g2f_A          267 REKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN  323 (336)
T ss_dssp             TSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred             ccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence            111 112222      24557999999999999999999999853      555554

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.57  E-value=1.9e-15  Score=104.99  Aligned_cols=95  Identities=16%  Similarity=0.223  Sum_probs=69.9

Q ss_pred             cccccccccchhhhhccC------CCCCchhhHHHHHHHHHHHHhCCCCCCCC----cHHHHHHHHHcCCCCC-------
Q 032711           17 WHVSRWNSLTDQVVNSKN------GGYGLPADIWSVGCTVLEMLTRCRPYFGV----EWVQALFKIARGELPP-------   79 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~------~~~~~~~dvws~G~~l~~l~~g~~p~~~~----~~~~~~~~i~~~~~~~-------   79 (135)
                      ..+||..|+|||++....      ..++.++|+||+|+++|++++|..||...    ...+.+..+..+....       
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  253 (396)
T 4eut_A          174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQK  253 (396)
T ss_dssp             CSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEEC
T ss_pred             cccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhhee
Confidence            457999999999987410      14678999999999999999999998542    2234455554443211       


Q ss_pred             -----------------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           80 -----------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        80 -----------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                                       ....++..+.+++.+||..||.+|+++.++++
T Consensus       254 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          254 AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             STTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             ccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence                             11234567889999999999999999998754

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.57  E-value=1e-14  Score=99.08  Aligned_cols=96  Identities=21%  Similarity=0.298  Sum_probs=67.7

Q ss_pred             cccccccccchhhhhccCC----CCCchhhHHHHHHHHHHHHhC----------CCCCCCCc-----HHHHHHHHHcCCC
Q 032711           17 WHVSRWNSLTDQVVNSKNG----GYGLPADIWSVGCTVLEMLTR----------CRPYFGVE-----WVQALFKIARGEL   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~----~~~~~~dvws~G~~l~~l~~g----------~~p~~~~~-----~~~~~~~i~~~~~   77 (135)
                      ...||+.|+|||++.....    .++.++||||+|+++|+|++|          ..||....     .......+.....
T Consensus       210 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  289 (342)
T 1b6c_B          210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL  289 (342)
T ss_dssp             SCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC
T ss_pred             cCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHh
Confidence            4579999999999976411    123689999999999999998          67875532     2222333322222


Q ss_pred             -CCCCC-----cccHHHHHHHHHhcccCCCCCCCHHHHhhC
Q 032711           78 -PPIPD-----SVSRDARDFILKCLQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        78 -~~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~~~l~~  112 (135)
                       +..+.     .....+.+++.+||..+|.+||++.+++++
T Consensus       290 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          290 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence             22222     334678899999999999999999998764

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.55  E-value=2e-15  Score=101.09  Aligned_cols=85  Identities=21%  Similarity=0.423  Sum_probs=62.0

Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC---CCCCC----CcccHHHHHHHHHhcccCCCCCCCHHH
Q 032711           36 GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE---LPPIP----DSVSRDARDFILKCLQVNPNDRPTAAQ  108 (135)
Q Consensus        36 ~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~---~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~  108 (135)
                      .++.++|+||+|+++++|++|..||.+.+.......+....   ....+    ..++.++.+++.+||..||.+||++.+
T Consensus       174 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e  253 (299)
T 3m2w_A          174 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE  253 (299)
T ss_dssp             GGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             cCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHH
Confidence            57889999999999999999999997655433221111110   01112    457889999999999999999999999


Q ss_pred             HhhCcCCCCCCC
Q 032711          109 LMEHPFVKRPLP  120 (135)
Q Consensus       109 ~l~~~~~~~~~~  120 (135)
                      +++||||.....
T Consensus       254 ~l~hp~~~~~~~  265 (299)
T 3m2w_A          254 FMNHPWIMQSTK  265 (299)
T ss_dssp             HHTSHHHHTGGG
T ss_pred             HhcChhhccccc
Confidence            999999987543

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.43  E-value=5.6e-14  Score=96.47  Aligned_cols=84  Identities=14%  Similarity=0.042  Sum_probs=61.6

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...+||+.|+|||++.+.  .++.++||||+|+++|+|++|+.||........  . .....  ..........+++..|
T Consensus       243 ~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--~-~~~~~--~~~~~~~~~~~~~~~~  315 (365)
T 3e7e_A          243 TAKCETSGFQCVEMLSNK--PWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC--K-PEGLF--RRLPHLDMWNEFFHVM  315 (365)
T ss_dssp             CCSSCTTSCCCHHHHTTC--CBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE--E-ECSCC--TTCSSHHHHHHHHHHH
T ss_pred             eeecCCCCCCChHHhcCC--CCCccccHHHHHHHHHHHHhCCCccccCCCCce--e-echhc--cccCcHHHHHHHHHHH
Confidence            346799999999999875  589999999999999999999999854321100  0 00111  1113456778999999


Q ss_pred             cccCCCCCCCH
Q 032711           96 LQVNPNDRPTA  106 (135)
Q Consensus        96 l~~~p~~Rps~  106 (135)
                      +..+|..|+..
T Consensus       316 l~~~p~~r~~~  326 (365)
T 3e7e_A          316 LNIPDCHHLPS  326 (365)
T ss_dssp             HCCCCTTCCCC
T ss_pred             cCCCCCCcchH
Confidence            99999999653

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.34  E-value=1.2e-13  Score=101.87  Aligned_cols=89  Identities=15%  Similarity=0.111  Sum_probs=66.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC-CCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP-IPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~li~~~   95 (135)
                      ..+||+.|+|||++...   ++.++||||+|+++++|++|..+|.+....        ..... .....+..+.+++.+|
T Consensus       236 ~~~gt~~y~aPE~~~~~---~~~~sDi~slG~~l~~l~~g~~~~~~~~~~--------~~~~~~~~~~~~~~l~~li~~~  304 (681)
T 2pzi_A          236 YLYGTPGFQAPEIVRTG---PTVATDIYTVGRTLAALTLDLPTRNGRYVD--------GLPEDDPVLKTYDSYGRLLRRA  304 (681)
T ss_dssp             CCCCCTTTSCTTHHHHC---SCHHHHHHHHHHHHHHHHSCCCEETTEECS--------SCCTTCHHHHHCHHHHHHHHHH
T ss_pred             ccCCCccccCHHHHcCC---CCCceehhhhHHHHHHHHhCCCCCcccccc--------cccccccccccCHHHHHHHhhh
Confidence            45799999999999763   588999999999999999998887642110        00000 0012356789999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~  116 (135)
                      |..||.+||+..+.+.|+|+.
T Consensus       305 l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          305 IDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             TCSSGGGSCSSHHHHHHHHHH
T ss_pred             ccCChhhCCCHHHHHHHHHHH
Confidence            999999999877777776653

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.34  E-value=5.1e-13  Score=90.75  Aligned_cols=104  Identities=15%  Similarity=0.183  Sum_probs=72.0

Q ss_pred             hhhhhhhhhhh--hcccccccccchhhhhccCCCCCchhhHHHHHHH-HHHHHhCCCCCCCCcHH-HHHHHHHcCC-CCC
Q 032711            5 TVEGLGNALRR--KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCT-VLEMLTRCRPYFGVEWV-QALFKIARGE-LPP   79 (135)
Q Consensus         5 ~~~~~~~~~~~--~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~-l~~l~~g~~p~~~~~~~-~~~~~i~~~~-~~~   79 (135)
                      ++.|+|.+...  ...+||+.|+|||++.+.   .+.++||||+++. .++++.|..||.+..+. .....+.... ...
T Consensus       222 kL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~---~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  298 (336)
T 2vuw_A          222 SIIDYTLSRLERDGIVVFCDVSMDEDLFTGD---GDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT  298 (336)
T ss_dssp             EECCCTTCBEEETTEEECCCCTTCSGGGCCC---SSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSS
T ss_pred             EEeeccccEecCCCcEEEeecccChhhhcCC---CccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCc
Confidence            45666655432  345899999999999874   3889999998766 66788888888543321 1222332211 111


Q ss_pred             -----CCCcccHHHHHHHHHhcccCCCCCCCHHHHh-hCcCCC
Q 032711           80 -----IPDSVSRDARDFILKCLQVNPNDRPTAAQLM-EHPFVK  116 (135)
Q Consensus        80 -----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l-~~~~~~  116 (135)
                           .+..+++++.+|+.+||..+     ++.+++ +||||+
T Consensus       299 ~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          299 KCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             ccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence                 12246788999999999976     999999 999985

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.15  E-value=8.2e-12  Score=83.27  Aligned_cols=75  Identities=16%  Similarity=0.187  Sum_probs=54.8

Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHH---HHHcCCCC---CCCCcccHHHHHHHHHhcccCCCCCCCHHHH
Q 032711           36 GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF---KIARGELP---PIPDSVSRDARDFILKCLQVNPNDRPTAAQL  109 (135)
Q Consensus        36 ~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~---~i~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~  109 (135)
                      .++.++|+||+|+++|+|++|+.||.+.+..+.+.   +.......   .....++..+.+++.+||..||.+| ++.++
T Consensus       178 ~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el  256 (286)
T 3uqc_A          178 DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTL  256 (286)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHH
Confidence            37889999999999999999999997754321110   00011111   1234678899999999999999999 99988


Q ss_pred             hh
Q 032711          110 ME  111 (135)
Q Consensus       110 l~  111 (135)
                      ++
T Consensus       257 ~~  258 (286)
T 3uqc_A          257 LN  258 (286)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=96.85  E-value=2e-05  Score=57.34  Aligned_cols=37  Identities=5%  Similarity=-0.022  Sum_probs=15.9

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT   55 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~   55 (135)
                      .+.+||+.|+|||++.+.   +...+|+|++|+.++++.+
T Consensus       397 ~t~vGTp~YmAPE~l~g~---~~~~~d~~s~g~~~~~l~~  433 (569)
T 4azs_A          397 TNLVQSFFVFVNELFAEN---KSWNGFWRSAPVHPFNLPQ  433 (569)
T ss_dssp             HHHHHHHHHHHHHHC--------------------CCCCT
T ss_pred             cCceechhhccHHHhCCC---CCCcccccccccchhhhcc
Confidence            456899999999999763   6778999999988766543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=94.65  E-value=0.0028  Score=45.84  Aligned_cols=45  Identities=20%  Similarity=0.242  Sum_probs=35.2

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPY   60 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~   60 (135)
                      .+.+||+.|+|||++......|+..+|+|+..+-..+...++.+|
T Consensus       494 ~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          494 KAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             hhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            467899999999999862225788889999988888777666555

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=91.84  E-value=0.49  Score=30.43  Aligned_cols=29  Identities=17%  Similarity=0.109  Sum_probs=18.7

Q ss_pred             ccchhhhhccCCCCCchhhHHHHHHHHHHHHh
Q 032711           24 SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT   55 (135)
Q Consensus        24 ~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~   55 (135)
                      +.+||....   ..+.+.-|+++|+++|..+-
T Consensus       103 ~~~pe~~~~---~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A          103 PVAGKLGYS---QCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             ----CCSSS---SSCHHHHHHHHHHHHHHHHT
T ss_pred             CCChhhccc---cchHHHHHHHHHHHHHHHhh
Confidence            556666532   34678899999999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	135
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-30
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-30
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	7e-30
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-28
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	7e-28
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-27
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-27
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-26
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-26
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	5e-26
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	7e-26
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-25
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-25
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-23
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-23
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	8e-23
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-22
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-22
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-22
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-22
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	5e-22
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	6e-22
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	7e-22
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	8e-22
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-21
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-21
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-21
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-21
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-21
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-21
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-21
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-21
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	6e-21
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-21
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-21
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	8e-21
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	9e-21
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-20
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-20
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-20
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-20
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-20
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-20
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-20
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-19
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-19
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	7e-19
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	8e-19
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-18
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-18
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-18
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-17
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-17
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-17
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	9e-17
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-16
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-16
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-15
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-14
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-13
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-13
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	6e-13

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (268), Expect = 6e-30
 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI--PDSVSRDARD 90
               YG   DIWS+G   +EM+    PY     ++AL+ IA    P +  P+ +S   RD
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD 248

Query: 91  FILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
           F+ +CL ++   R +A +L++H F+K   P S
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQHQFLKIAKPLS 280

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  107 bits (268), Expect = 6e-30
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 20  SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP 79
           + +    + ++    G Y    D+WS+G T +E+  R  P F +  + AL+ IA+ E P 
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA 233

Query: 80  I-PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 122
           +     S   R+F+  CLQ  P DRPT+  L++H FV R  P +
Sbjct: 234 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPT 277

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 7e-30
 Identities = 21/83 (25%), Positives = 38/83 (45%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
               Y   +DIWS+GC + E+     P+      +   KI  G+   IP   S +  + I
Sbjct: 187 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEII 246

Query: 93  LKCLQVNPNDRPTAAQLMEHPFV 115
            + L +    RP+  +++E+P +
Sbjct: 247 TRMLNLKDYHRPSVEEILENPLI 269

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (258), Expect = 2e-28
 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 2/89 (2%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDA 88
            SK+  Y   AD+WS+G T++EM     P+  +  ++ L KIA+ E P    P   S + 
Sbjct: 186 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 245

Query: 89  RDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           +DF+ KCL+ N + R T +QL++HPFV  
Sbjct: 246 KDFLKKCLEKNVDARWTTSQLLQHPFVTV 274

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 7e-28
 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDAR 89
           ++       D+WS+G  V  +L+   P+      Q +  I   E          +S +A 
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM 235

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 120
           DF+ + L      R TA++ ++HP++K+ + 
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWLKQKIE 266

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 1e-27
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           +   +    D+WS+G    E L    P+    + +   +I+R E    PD V+  ARD I
Sbjct: 177 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE-FTFPDFVTEGARDLI 235

Query: 93  LKCLQVNPNDRPTAAQLMEHPFVK 116
            + L+ NP+ RP   +++EHP++ 
Sbjct: 236 SRLLKHNPSQRPMLREVLEHPWIT 259

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  100 bits (250), Expect = 2e-27
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 3/90 (3%)

Query: 31  NSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRD 87
           N  + GYG   D+WS G  +  +L    P++  + +  L  I  G      P  D  S  
Sbjct: 186 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT 245

Query: 88  ARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
            +D + + L V P  R TA + + HPF ++
Sbjct: 246 VKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.8 bits (243), Expect = 1e-26
 Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP--IPDSVSRDARDF 91
              Y    D+++ G  +LEM T   PY   +    +++     + P         + ++ 
Sbjct: 186 EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 245

Query: 92  ILKCLQVNPNDRPTAAQLMEHPFVK 116
           I  C++ N ++R +   L+ H F +
Sbjct: 246 IEGCIRQNKDERYSIKDLLNHAFFQ 270

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 98.6 bits (245), Expect = 1e-26
 Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 3/99 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDAR 89
               Y    D WS+G     +L    P++     +   +I + E     P  D +S  A+
Sbjct: 182 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 241

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 128
           DFI   ++ +P  R T  Q ++HP++         +   
Sbjct: 242 DFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQS 280

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.1 bits (241), Expect = 5e-26
 Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 8/102 (7%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDAR 89
                GL AD+WS+G     +L+   P+ G    + L  ++            + S  A+
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 248

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 126
           DFI + L  +P  R T    ++HP++K     + L ++W  P
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 290

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 97.4 bits (242), Expect = 7e-26
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 3/87 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDAR 89
                G   D+W++G     +L+   P+ G + ++ L  + R +         SVS +A+
Sbjct: 201 DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK 260

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVK 116
           DFI   LQ  P  R T    +EHP++K
Sbjct: 261 DFIKNLLQKEPRKRLTVHDALEHPWLK 287

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.5 bits (237), Expect = 1e-25
 Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 2/91 (2%)

Query: 32  SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR--GELPPIPDSVSRDAR 89
            +   +  P D+WS G  +  ML    P+         +   +           +     
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 237

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 120
             + K L  NP+ R T   + +  +  +PL 
Sbjct: 238 ALLHKILVENPSARITIPDIKKDRWYNKPLK 268

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 97.1 bits (241), Expect = 1e-25
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 3/88 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL---PPIPDSVSRDAR 89
           +    G   D+WSVG     +L+   P+ G    + L  +   +          +S D +
Sbjct: 198 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 257

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVKR 117
           DFI K L  +PN R T  Q +EHP++  
Sbjct: 258 DFIRKLLLADPNTRMTIHQALEHPWLTP 285

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 2e-23
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 1/85 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
                   +D+W++GC + +++    P+          KI + E    P+     ARD +
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE-YDFPEKFFPKARDLV 241

Query: 93  LKCLQVNPNDRPTAAQLMEHPFVKR 117
            K L ++   R    ++  +  +K 
Sbjct: 242 EKLLVLDATKRLGCEEMEGYGPLKA 266

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.3 bits (221), Expect = 2e-23
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 1/81 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
           +   +   +D+WS G  + E+ +  R PY  +     + ++ +G     PD       + 
Sbjct: 173 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEV 232

Query: 92  ILKCLQVNPNDRPTAAQLMEH 112
           +  C  ++   RP+  QL E 
Sbjct: 233 MKNCWHLDAAMRPSFLQLREQ 253

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.2 bits (218), Expect = 8e-23
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 3/91 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIARGELPPIPDSVSRDARDF 91
             G + + +D+WS G  + E+ T+ R  + G+   + L ++ RG   P P        D 
Sbjct: 187 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 246

Query: 92  ILKCLQVNPNDRPTAAQLME--HPFVKRPLP 120
           + +C +  P +RPT   L      +     P
Sbjct: 247 MCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 277

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.3 bits (218), Expect = 1e-22
 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
               Y    D WS G  + EML    P+ G +  + LF   R + P  P  + ++A+D +
Sbjct: 176 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHG-QDEEELFHSIRMDNPFYPRWLEKEAKDLL 234

Query: 93  LKCLQVNPNDRPTAA-QLMEHPFVK 116
           +K     P  R      + +HP  +
Sbjct: 235 VKLFVREPEKRLGVRGDIRQHPLFR 259

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.9 bits (215), Expect = 2e-22
 Identities = 16/99 (16%), Positives = 40/99 (40%), Gaps = 6/99 (6%)

Query: 28  QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG-----ELPPIPD 82
            +       Y   +D+++ G  + E++T   PY  +     +  +        +L  +  
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 236

Query: 83  SVSRDARDFILKCLQVNPNDRPTAAQLMEHP-FVKRPLP 120
           +  +  +  + +CL+   ++RP   Q++     + R LP
Sbjct: 237 NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP 275

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.1 bits (215), Expect = 3e-22
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 1/81 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIARGELPPIPDSVSRDARDF 91
           +   +   +D+WS G  + E++TR  P +  V        + +G     P+       + 
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEV 266

Query: 92  ILKCLQVNPNDRPTAAQLMEH 112
           +LKC       RP+ ++L+  
Sbjct: 267 MLKCWHPKAEMRPSFSELVSR 287

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.8 bits (214), Expect = 4e-22
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 8/108 (7%)

Query: 17  WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE 76
                   +   +V   + G+    D WS+G  + E+LT   P+       +  +I+R  
Sbjct: 189 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI 248

Query: 77  L---PPIPDSVSRDARDFILKCLQVNPNDRP-----TAAQLMEHPFVK 116
           L   PP P  +S  A+D I + L  +P  R       A ++ EH F +
Sbjct: 249 LKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ 296

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.0 bits (212), Expect = 5e-22
 Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 1/81 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
               +   +D+W  G  + E+L     P+ GV+    + +I  GE  P+P +        
Sbjct: 182 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL 241

Query: 92  ILKCLQVNPNDRPTAAQLMEH 112
           + KC   +P+ RP   +L   
Sbjct: 242 MTKCWAYDPSRRPRFTELKAQ 262

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 6e-22
 Identities = 17/86 (19%), Positives = 36/86 (41%), Gaps = 4/86 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
               +   +D+WS G  + E  +  + PY G++  +    + +GE    P    R+  D 
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDL 242

Query: 92  ILKCLQVNPNDRPTAAQL---MEHPF 114
           +  C   +  +RP  A +   + + +
Sbjct: 243 MNLCWTYDVENRPGFAAVELRLRNYY 268

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.7 bits (214), Expect = 7e-22
 Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 7/95 (7%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG------VEWVQALFKIARGELP-PIPDSVS 85
               Y    D+WS+G  +  +L    P++          ++   ++ + E P P    VS
Sbjct: 186 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 245

Query: 86  RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 120
            + +  I   L+  P  R T  + M HP++ +   
Sbjct: 246 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 280

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.6 bits (211), Expect = 8e-22
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIAR-GELPPIPDSVSRDARD 90
           K   +   +D W  G T+ EM T  + P+ G+   Q L KI + GE  P P+   +D  +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 246

Query: 91  FILKCLQVNPNDRPTAAQLMEH 112
            +++C    P DRPT   L + 
Sbjct: 247 VMVQCWAHKPEDRPTFVALRDF 268

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.2 bits (210), Expect = 1e-21
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 4/88 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
               +   +D+WS G T+ E L+  + PY  ++  + +  I +G+    P     +    
Sbjct: 185 NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYAL 244

Query: 92  ILKCLQVNPNDRPTAAQL---MEHPFVK 116
           +  C      DRP    +   M   +  
Sbjct: 245 MSDCWIYKWEDRPDFLTVEQRMRACYYS 272

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.7 bits (209), Expect = 1e-21
 Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 1/81 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
               +   +DIW+ G  + E+ +  + PY      +    IA+G     P   S      
Sbjct: 174 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTI 233

Query: 92  ILKCLQVNPNDRPTAAQLMEH 112
           +  C     ++RPT   L+ +
Sbjct: 234 MYSCWHEKADERPTFKILLSN 254

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 84.8 bits (209), Expect = 2e-21
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP---IPDSVSRDAR 89
           +       +D++S+GC + E+LT   P+ G   V   ++  R +  P     + +S D  
Sbjct: 187 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLD 246

Query: 90  DFILKCLQVNPNDRPTAAQLMEHPFVK 116
             +LK L  NP +R   A  M    V+
Sbjct: 247 AVVLKALAKNPENRYQTAAEMRADLVR 273

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.6 bits (211), Expect = 2e-21
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 6/89 (6%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
           ++  YG   D W +G  + EM+    P++  +  +    I   E    P ++S +A+  +
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE-IRFPRTLSPEAKSLL 236

Query: 93  LKCLQVNPNDRP-----TAAQLMEHPFVK 116
              L+ +P  R       A ++MEH F  
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.4 bits (208), Expect = 2e-21
 Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 7/83 (8%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           +  +G  A +WS+G  + +M+    P+   E      +I RG++      VS + +  I 
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF-FRQRVSSECQHLIR 236

Query: 94  KCLQVNPNDRPTAAQLMEHPFVK 116
            CL + P+DRPT  ++  HP+++
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWMQ 259

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 84.8 bits (209), Expect = 2e-21
 Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 6/89 (6%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFI 92
               Y    D WS G  + EML    P++    ++   KI   E    P   + D +D +
Sbjct: 174 STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE-LRFPPFFNEDVKDLL 232

Query: 93  LKCLQVNPNDR-----PTAAQLMEHPFVK 116
            + +  + + R          +  HP+ K
Sbjct: 233 SRLITRDLSQRLGNLQNGTEDVKNHPWFK 261

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.0 bits (207), Expect = 3e-21
 Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 1/81 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
               Y   +D+WS G  + E+ +  + PY      + +  I+ G     P   S      
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQI 234

Query: 92  ILKCLQVNPNDRPTAAQLMEH 112
           +  C +  P DRP  ++L+  
Sbjct: 235 MNHCWKERPEDRPAFSRLLRQ 255

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.5 bits (208), Expect = 3e-21
 Identities = 28/110 (25%), Positives = 37/110 (33%), Gaps = 26/110 (23%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP------------- 79
               Y  P D+WSVGC   EM  R   + G   V  L KI      P             
Sbjct: 188 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 247

Query: 80  -------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
                            +    +D +LKCL  NP  R +A   + HP+ +
Sbjct: 248 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.7 bits (206), Expect = 6e-21
 Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 1/81 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
               Y   +D+WS G  + E+++    PY G+   +   K+ +G     P +   +  D 
Sbjct: 199 NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDL 258

Query: 92  ILKCLQVNPNDRPTAAQLMEH 112
           + +C +  P +RP+ AQ++  
Sbjct: 259 MRQCWREKPYERPSFAQILVS 279

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.7 bits (206), Expect = 6e-21
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
            +  Y   +D+WS G TV E++T    PY G+   +    + +GE  P P   + D    
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 245

Query: 92  ILKCLQVNPNDRPTAAQLMEH 112
           ++KC  ++ + RP   +L+  
Sbjct: 246 MVKCWMIDADSRPKFRELIIE 266

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 83.7 bits (206), Expect = 6e-21
 Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 1/80 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
               Y   +D+W+ G  + E+ +    PY+G+   + ++ +  G +   P++   +  + 
Sbjct: 215 FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNL 274

Query: 92  ILKCLQVNPNDRPTAAQLME 111
           +  C    P DRP+   +  
Sbjct: 275 MRLCWSKLPADRPSFCSIHR 294

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.4 bits (205), Expect = 8e-21
 Identities = 31/123 (25%), Positives = 43/123 (34%), Gaps = 29/123 (23%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP---------------- 79
            YG+  D+W+VGC + E+L R     G   +  L +I      P                
Sbjct: 177 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 236

Query: 80  -----------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK-RPLPT-SWGLP 126
                      I  +   D  D I      NP  R TA Q ++  +   RP PT    LP
Sbjct: 237 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLP 296

Query: 127 TPH 129
            P+
Sbjct: 297 RPN 299

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.0 bits (204), Expect = 9e-21
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 1/81 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFK-IARGELPPIPDSVSRDARDF 91
            +  Y   +D+WS G  + E+ T     +    V+ LFK +  G     P + + +    
Sbjct: 210 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMM 269

Query: 92  ILKCLQVNPNDRPTAAQLMEH 112
           +  C    P+ RPT  QL+E 
Sbjct: 270 MRDCWHAVPSQRPTFKQLVED 290

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 83.2 bits (205), Expect = 1e-20
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 15  RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWVQALFKI 72
           +       +      V  K   Y   AD +S+GC + ++L    P+     +    + ++
Sbjct: 161 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM 220

Query: 73  ARGELPPIPDSVSRDARDFILKCLQVNPNDRPT-----AAQLMEHPFVK 116
                  +PDS S + R  +   LQ + N R       A ++ E PF +
Sbjct: 221 TLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 269

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.0 bits (202), Expect = 2e-20
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIARGELPPIPDSVSRDARDF 91
             G + + +D+WS G  + E++T  R  + G+   + +  + RG     PD+   +    
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL 242

Query: 92  ILKCLQVNPNDRPTAAQLM---EHPF 114
           +  C +  P DRPT   L    E  F
Sbjct: 243 MRLCWKERPEDRPTFDYLRSVLEDFF 268

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 81.9 bits (201), Expect = 2e-20
 Identities = 32/136 (23%), Positives = 45/136 (33%), Gaps = 28/136 (20%)

Query: 9   LGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQA 68
            G  +R+  H           V   +  Y    DIWSVGC   EM+     + GV     
Sbjct: 150 FGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ 209

Query: 69  LFKIARGELPP----------------------------IPDSVSRDARDFILKCLQVNP 100
           L +I R    P                                +     D + K L+++P
Sbjct: 210 LMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDP 269

Query: 101 NDRPTAAQLMEHPFVK 116
           N R TA Q +EH + K
Sbjct: 270 NQRITAKQALEHAYFK 285

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.8 bits (201), Expect = 3e-20
 Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 31/119 (26%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP------------- 79
               Y    DIWS+GC   EM+TR   + G   +  LF+I R    P             
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235

Query: 80  ---------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK---RPLP 120
                          +   +  D R  + + L  +PN R +A   + HPF +   +P+P
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 81.7 bits (201), Expect = 3e-20
 Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 1/81 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
           +   +   +D+WS G  + E+++    PY+ +     +  I +    P P          
Sbjct: 206 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQL 265

Query: 92  ILKCLQVNPNDRPTAAQLMEH 112
           +L C Q + N RP   Q++  
Sbjct: 266 MLDCWQKDRNHRPKFGQIVNT 286

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.4 bits (200), Expect = 5e-20
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 7/93 (7%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGELPPIPDSVSRDARDF 91
           K+G +   +D+WS G  + E+ T    PY G+   Q L  +  G L   PD+      + 
Sbjct: 208 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL 267

Query: 92  ILKCLQVNPNDRPTAAQLME------HPFVKRP 118
           +  C Q NP  RP+  +++        P  +  
Sbjct: 268 MRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 300

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.3 bits (200), Expect = 6e-20
 Identities = 29/128 (22%), Positives = 44/128 (34%), Gaps = 43/128 (33%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG------------------------------ 62
           +   Y + +DIWS+G +++EM     P                                 
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 235

Query: 63  ------------VEWVQALFKIARGELPPIPDS-VSRDARDFILKCLQVNPNDRPTAAQL 109
                       +   + L  I     P +P    S + +DF+ KCL  NP +R    QL
Sbjct: 236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295

Query: 110 MEHPFVKR 117
           M H F+KR
Sbjct: 296 MVHAFIKR 303

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.2 bits (197), Expect = 1e-19
 Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFKIARGEL-PPIPDSVSRDARD 90
             G Y + +D+WS G  + E+ +    PY G+      +K+ +       P   + +   
Sbjct: 239 FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYI 298

Query: 91  FILKCLQVNPNDRPTAAQLMEH 112
            +  C   +   RP+   L   
Sbjct: 299 IMQSCWAFDSRKRPSFPNLTSF 320

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.6 bits (195), Expect = 3e-19
 Identities = 26/118 (22%), Positives = 37/118 (31%), Gaps = 32/118 (27%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPD------------- 82
            YG P D+W  GC + EM TR     G      L  I++      P+             
Sbjct: 198 DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEK 257

Query: 83  ------------------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR-PLPT 121
                                  A D I K L ++P  R  +   + H F    P+P+
Sbjct: 258 LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPS 315

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 7e-19
 Identities = 25/136 (18%), Positives = 37/136 (27%), Gaps = 34/136 (25%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPD---------- 82
               Y    D+WS GC + E+L     + G   V  L +I +    P  +          
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255

Query: 83  ------------------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR------P 118
                                 +A     + L+  P  R T  +   H F          
Sbjct: 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVK 315

Query: 119 LPTSWGLPTPHHFIMQ 134
           LP     P   +F  Q
Sbjct: 316 LPNGRDTPALFNFTTQ 331

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.0 bits (191), Expect = 8e-19
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWVQALFK-IARGELPPIPDSVSRDARD 90
            +  Y + +D+WS G  + E+ +    PY GV+  +   + +  G     PD  + +   
Sbjct: 209 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ 268

Query: 91  FILKCLQVNPNDRPTAAQLMEH 112
            +L C    P+ RPT ++L+EH
Sbjct: 269 TMLDCWHGEPSQRPTFSELVEH 290

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 77.5 bits (190), Expect = 2e-18
 Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 6/88 (6%)

Query: 34  NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFIL 93
           + GY    D W++G  + EM     P+F  + +Q   KI  G+    P   S D +D + 
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-VRFPSHFSSDLKDLLR 270

Query: 94  KCLQVNPNDR-----PTAAQLMEHPFVK 116
             LQV+   R          +  H +  
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFA 298

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 76.7 bits (188), Expect = 2e-18
 Identities = 14/80 (17%), Positives = 36/80 (45%), Gaps = 1/80 (1%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-PPIPDSVSRDARDF 91
               + + +D+W+ G  + E+ T     +    +  ++++   +     P+       + 
Sbjct: 189 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYEL 248

Query: 92  ILKCLQVNPNDRPTAAQLME 111
           +  C Q NP+DRP+ A++ +
Sbjct: 249 MRACWQWNPSDRPSFAEIHQ 268

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.4 bits (187), Expect = 2e-18
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 3/89 (3%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFK-IARGELPPIPDSVSRDARDF 91
               +   +D+WS G  + E++T     +       + K I  G   P P          
Sbjct: 186 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQL 245

Query: 92  ILKCLQVNPNDRPTAAQLME--HPFVKRP 118
           +++C Q     RP  A ++      ++ P
Sbjct: 246 MMQCWQQERARRPKFADIVSILDKLIRAP 274

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.6 bits (182), Expect = 1e-17
 Identities = 26/120 (21%), Positives = 40/120 (33%), Gaps = 29/120 (24%)

Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIARGELPP--------- 79
           V      Y    D+WS GC   E+    RP F G +    L +I R    P         
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231

Query: 80  -------------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 120
                              +   ++   RD +   L+ NP  R +A + ++HP+     P
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP 291

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 73.3 bits (179), Expect = 3e-17
 Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 10/95 (10%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE-------LPPIPDSVS 85
                    D+ S+G  ++       P+ G++      K  R         +  +     
Sbjct: 186 LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYP 245

Query: 86  RDARDFILKCLQVNPNDRPTAA---QLMEHPFVKR 117
            +   ++  C  +  +D+P  +   QL  + F ++
Sbjct: 246 SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 280

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (179), Expect = 6e-17
 Identities = 29/134 (21%), Positives = 46/134 (34%), Gaps = 31/134 (23%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPD---------- 82
               Y    DIWSVGC + E+LT    + G + +  L  I R    P  +          
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 251

Query: 83  --------------------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR-PLPT 121
                                 +  A D + K L ++ + R TAAQ + H +  +   P 
Sbjct: 252 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311

Query: 122 SWGLPTPHHFIMQS 135
              +  P+    +S
Sbjct: 312 DEPVADPYDQSFES 325

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.5 bits (177), Expect = 9e-17
 Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 30/117 (25%)

Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP---------- 79
           V      Y    DIWSVGC + EM+T    + G + +  L +I +    P          
Sbjct: 189 VILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 248

Query: 80  --------------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 116
                               I  + S  A + + K L ++   R TA + + HP+ +
Sbjct: 249 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 305

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (176), Expect = 1e-16
 Identities = 26/112 (23%), Positives = 40/112 (35%), Gaps = 30/112 (26%)

Query: 36  GYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP---------------- 79
           GY    DIWSVGC + EML+    + G  ++  L  I      P                
Sbjct: 189 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 248

Query: 80  --------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 117
                         +  +    A D + K L  NP+ R    Q + HP++++
Sbjct: 249 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 300

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 2e-16
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 2/81 (2%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEWVQALFKIARGEL-PPIPDSVSRDARD 90
            N  Y   +D+WS G  + E+ +     + G+      +K+ +       P+    +  D
Sbjct: 220 FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYD 279

Query: 91  FILKCLQVNPNDRPTAAQLME 111
            +  C   +P  RPT  Q+++
Sbjct: 280 IMKTCWDADPLKRPTFKQIVQ 300

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (170), Expect = 1e-15
 Identities = 28/144 (19%), Positives = 46/144 (31%), Gaps = 42/144 (29%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPD---------- 82
              GY    DIWSVGC + EM+     + G +++    K+      P P+          
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250

Query: 83  -------------------------------SVSRDARDFILKCLQVNPNDRPTAAQLME 111
                                            +  ARD + K L ++P  R +    ++
Sbjct: 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310

Query: 112 HPFVKR-PLPTSWGLPTPHHFIMQ 134
           HP++     P     P P  +  Q
Sbjct: 311 HPYINVWYDPAEVEAPPPQIYDKQ 334

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 66.0 bits (160), Expect = 2e-14
 Identities = 29/124 (23%), Positives = 42/124 (33%), Gaps = 37/124 (29%)

Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWVQALFKIA 73
           +      Y    D+WS+GC +  M+ R  P+F                G E +       
Sbjct: 200 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 259

Query: 74  RGELPP---------------------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 112
             EL P                         VS +A DF+ K L+ +   R TA + MEH
Sbjct: 260 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319

Query: 113 PFVK 116
           P+  
Sbjct: 320 PYFY 323

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 3e-13
 Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 21/103 (20%)

Query: 30  VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALF------------------- 70
           +N K+      ADI+++G    E+  RC      E  Q  +                   
Sbjct: 188 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 247

Query: 71  KIARGELPPIPDS--VSRDARDFILKCLQVNPNDRPTAAQLME 111
           +  R  +P    S    R     + +C   N   R TA ++ +
Sbjct: 248 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.0 bits (149), Expect = 6e-13
 Identities = 24/137 (17%), Positives = 41/137 (29%), Gaps = 47/137 (34%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFG------------------------------ 62
               +G  ADIWS  C + E++T    +                                
Sbjct: 202 LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRN 261

Query: 63  -------VEWVQALFKIARGELPP----------IPDSVSRDARDFILKCLQVNPNDRPT 105
                        L  I++ +  P               +++  DF+   LQ++P  R  
Sbjct: 262 GKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 321

Query: 106 AAQLMEHPFVKRPLPTS 122
           A  L+ HP++K  L   
Sbjct: 322 AGGLVNHPWLKDTLGME 338

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 61.7 bits (149), Expect = 6e-13
 Identities = 10/86 (11%), Positives = 23/86 (26%), Gaps = 7/86 (8%)

Query: 33  KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR-------GELPPIPDSVS 85
                    D+ ++G   +  L    P+ G++      K  R         L  +     
Sbjct: 186 LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFP 245

Query: 86  RDARDFILKCLQVNPNDRPTAAQLME 111
            +   ++     +  +  P    L  
Sbjct: 246 EEFYKYMHYARNLAFDATPDYDYLQG 271

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	135
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.94
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.94
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.93
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.93
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.92
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.92
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.92
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.92
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.92
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.92
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.92
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.91
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.91
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.91
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.91
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.91
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.9
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.9
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.9
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.89
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.89
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.88
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.88
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.88
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.87
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.87
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.87
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.87
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.87
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.86
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.86
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.86
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.86
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.86
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.86
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.86
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.86
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.85
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.85
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.85
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.85
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.85
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.85
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.85
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.85
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.84
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.84
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.84
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.84
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.82
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.82
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.81
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.81
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.81
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.81
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.79
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.78
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.76
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.68
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.66

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.1e-27  Score=153.59  Aligned_cols=98  Identities=24%  Similarity=0.461  Sum_probs=87.6

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...+||+.|+|||++.+.  .|+.++||||+|+++|+|++|..||.+.+..+....+..+.....+..+++++.+++.+|
T Consensus       172 ~~~~gt~~Y~APE~l~~~--~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~s~~l~~li~~~  249 (269)
T d2java1         172 KAFVGTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRM  249 (269)
T ss_dssp             ----CCCSCCCHHHHTTC--CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHH
T ss_pred             ccCCCCcccCCHHHHcCC--CCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHH
Confidence            346899999999999774  689999999999999999999999999888888888888877777888999999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFV  115 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~  115 (135)
                      |..||.+||++.|+++|||+
T Consensus       250 L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         250 LNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             TCSSGGGSCCHHHHHTSTTC
T ss_pred             cCCChhHCcCHHHHHhCCcC
Confidence            99999999999999999996

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.3e-26  Score=153.69  Aligned_cols=112  Identities=21%  Similarity=0.350  Sum_probs=93.3

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      .+.+||+.|+|||++.+.  .|+.++||||+||++|+|++|..||.+.+..+....+.+... ..|..+++++.+|+.+|
T Consensus       168 ~~~~GT~~Y~APE~~~~~--~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~  244 (288)
T d1uu3a_         168 NSFVGTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKL  244 (288)
T ss_dssp             --CCCCGGGCCHHHHHTC--CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC-CCCTTCCHHHHHHHHTT
T ss_pred             ccccCCccccCceeeccC--CCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCC-CCCccCCHHHHHHHHHH
Confidence            356899999999999875  689999999999999999999999999888888888877664 56778899999999999


Q ss_pred             cccCCCCCCCHHH------HhhCcCCCCCCCCCCCCCCccc
Q 032711           96 LQVNPNDRPTAAQ------LMEHPFVKRPLPTSWGLPTPHH  130 (135)
Q Consensus        96 l~~~p~~Rps~~~------~l~~~~~~~~~~~~~~~~~~~~  130 (135)
                      |..||.+||+++|      +++||||++..........|+.
T Consensus       245 L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~~l~~~~pP~  285 (288)
T d1uu3a_         245 LVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPK  285 (288)
T ss_dssp             SCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSCCCC
T ss_pred             ccCCHhHCcCHHHHcCCHHHHcCCccCCCCHHHhhcCCCCC
Confidence            9999999999987      5789999886544443333443

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.2e-26  Score=152.05  Aligned_cols=98  Identities=27%  Similarity=0.502  Sum_probs=88.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++.+.  .|+.++||||+||++|+|++|+.||.+.+..+.+..+.+... ..|..+++++.+++.+||
T Consensus       163 ~~~Gt~~Y~APE~~~~~--~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~L  239 (263)
T d2j4za1         163 TLCGTLDYLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLISRLL  239 (263)
T ss_dssp             ETTEEGGGCCHHHHTTC--CCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC-CCCTTSCHHHHHHHHHHT
T ss_pred             ccCCCCcccCHHHHcCC--CCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-CCCccCCHHHHHHHHHHc
Confidence            45899999999999875  689999999999999999999999998888887777776654 567778999999999999


Q ss_pred             ccCCCCCCCHHHHhhCcCCCC
Q 032711           97 QVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~~~~~~  117 (135)
                      ..||.+||++.|+++||||+.
T Consensus       240 ~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         240 KHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             CSSGGGSCCHHHHHTCHHHHH
T ss_pred             cCCHhHCcCHHHHHcCcCcCC
Confidence            999999999999999999975

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=1e-25  Score=150.44  Aligned_cols=103  Identities=23%  Similarity=0.418  Sum_probs=85.3

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC---CCCCcccHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP---PIPDSVSRDARDFI   92 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~li   92 (135)
                      .+.+||+.|+|||++.+.  .|+.++||||+||++|+|++|..||.+.+..+....+.+....   +.+..+++++.+|+
T Consensus       167 ~~~~GT~~y~APE~~~~~--~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  244 (307)
T d1a06a_         167 STACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI  244 (307)
T ss_dssp             ------CTTSCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHH
T ss_pred             eeeeeCccccCcHHHcCC--CCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHH
Confidence            346899999999999875  6899999999999999999999999998888877777766542   23456889999999


Q ss_pred             HHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           93 LKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        93 ~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      .+||..||.+||++.|+++||||++...
T Consensus       245 ~~~L~~dP~~R~s~~eil~hp~~~~~~~  272 (307)
T d1a06a_         245 RHLMEKDPEKRFTCEQALQHPWIAGDTA  272 (307)
T ss_dssp             HHHSCSSGGGSCCHHHHHHSTTTTSSCC
T ss_pred             HHHccCCHhHCcCHHHHhcCHhhCCCCc
Confidence            9999999999999999999999986443

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=9.6e-26  Score=149.72  Aligned_cols=103  Identities=32%  Similarity=0.533  Sum_probs=87.7

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--CCCCCcccHHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--PPIPDSVSRDARDFIL   93 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~li~   93 (135)
                      ...+||+.|+|||++.+.  .|+.++||||+||++|+|++|..||.+.+....+..+.....  ...+..++.++.+|+.
T Consensus       174 ~~~~gt~~Y~aPE~~~~~--~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~  251 (293)
T d1yhwa1         174 STMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN  251 (293)
T ss_dssp             CCCCSCGGGCCHHHHSSS--CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHH
T ss_pred             cccccCCCccChhhhcCC--CCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHH
Confidence            345899999999999874  689999999999999999999999998887777666554433  2345678899999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      +||..||.+||++.++++||||+...+
T Consensus       252 ~~L~~dP~~R~s~~eil~Hp~~~~~~~  278 (293)
T d1yhwa1         252 RCLDMDVEKRGSAKELLQHQFLKIAKP  278 (293)
T ss_dssp             HHTCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             HHccCChhHCcCHHHHhcCHhhCCCCC
Confidence            999999999999999999999986443

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=6.9e-26  Score=151.42  Aligned_cols=115  Identities=33%  Similarity=0.529  Sum_probs=93.9

Q ss_pred             hhhhhhhhhh---hcccccccccchhhhhcc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC-C
Q 032711            6 VEGLGNALRR---KWHVSRWNSLTDQVVNSK-NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP-I   80 (135)
Q Consensus         6 ~~~~~~~~~~---~~~~gt~~~~aPE~~~~~-~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~-~   80 (135)
                      +.|+|.+...   ...+||+.|+|||++.+. ...|+.++||||+||++|+|++|..||.+.+..+.+..+.....+. .
T Consensus       156 l~DFG~a~~~~~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~  235 (309)
T d1u5ra_         156 LGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ  235 (309)
T ss_dssp             ECCCTTCBSSSSBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCS
T ss_pred             EeecccccccCCCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC
Confidence            4555544332   346899999999999753 2358999999999999999999999999988887777777665543 3


Q ss_pred             CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           81 PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        81 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      +..++..+.+|+.+||..||.+||+++++++||||....+
T Consensus       236 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~~  275 (309)
T d1u5ra_         236 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP  275 (309)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred             CCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCCCC
Confidence            4567899999999999999999999999999999986543

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.1e-25  Score=146.61  Aligned_cols=104  Identities=15%  Similarity=0.177  Sum_probs=81.6

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHH-HHHHcCC-CCCCCCcccHHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQAL-FKIARGE-LPPIPDSVSRDARDFIL   93 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~-~~i~~~~-~~~~~~~~~~~~~~li~   93 (135)
                      .+.+||+.|+|||++.+. ..++.++||||+|+++|+|++|+.||......... ..+.... .......++.++.+++.
T Consensus       163 ~~~~GT~~Y~APE~~~~~-~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~  241 (271)
T d1nvra_         163 NKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH  241 (271)
T ss_dssp             CCCCSCGGGSCTHHHHCS-SBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHH
T ss_pred             cceeeCcCccCHhHhcCC-CCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHH
Confidence            356899999999999875 23467899999999999999999999765543322 2222222 22334567899999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      +||..||.+||+++++++||||+....
T Consensus       242 ~~L~~dP~~R~t~~eil~hpwf~~~l~  268 (271)
T d1nvra_         242 KILVENPSARITIPDIKKDRWYNKPLK  268 (271)
T ss_dssp             HHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             HHcCCChhHCcCHHHHhcCHhhCcCCC
Confidence            999999999999999999999986443

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.8e-25  Score=146.94  Aligned_cols=108  Identities=21%  Similarity=0.374  Sum_probs=85.1

Q ss_pred             hhhhhhhhh-----hhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH-HHHHHHHcCCCC-
Q 032711            6 VEGLGNALR-----RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV-QALFKIARGELP-   78 (135)
Q Consensus         6 ~~~~~~~~~-----~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~-~~~~~i~~~~~~-   78 (135)
                      +.|+|.+..     ..+.+||+.|+|||++.+   .++.++||||+||++|+|++|..||.+.... .....+..+..+ 
T Consensus       156 l~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~---~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~  232 (270)
T d1t4ha_         156 IGDLGLATLKRASFAKAVIGTPEFMAPEMYEE---KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA  232 (270)
T ss_dssp             ECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT---CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG
T ss_pred             EeecCcceeccCCccCCcccCccccCHHHhCC---CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCc
Confidence            455555532     234689999999999865   5899999999999999999999999775544 444455444332 


Q ss_pred             CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCC
Q 032711           79 PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK  116 (135)
Q Consensus        79 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~  116 (135)
                      ..+...++++.+++.+||..||++||+++|+++||||+
T Consensus       233 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         233 SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             ccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence            23445678999999999999999999999999999985

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.1e-25  Score=145.91  Aligned_cols=103  Identities=33%  Similarity=0.525  Sum_probs=87.8

Q ss_pred             hcccccccccchhhhhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC--CCCCcccHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSK---NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP--PIPDSVSRDARD   90 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~---~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~   90 (135)
                      .+.+||+.|+|||++...   ...|+.++||||+||++|+|++|..||.+.+..+.+..+.+...+  ..+..++.++.+
T Consensus       168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~  247 (288)
T d2jfla1         168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKD  247 (288)
T ss_dssp             TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHH
T ss_pred             cccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHH
Confidence            467899999999998532   235889999999999999999999999988877777777766543  335678899999


Q ss_pred             HHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           91 FILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        91 li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      |+.+||+.||.+||+++++++||||+..
T Consensus       248 li~~~L~~dp~~R~t~~ell~hp~~~~~  275 (288)
T d2jfla1         248 FLKKCLEKNVDARWTTSQLLQHPFVTVD  275 (288)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTTSGGGCCC
T ss_pred             HHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            9999999999999999999999999753

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.1e-24  Score=145.14  Aligned_cols=101  Identities=29%  Similarity=0.429  Sum_probs=84.0

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC------------------
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL------------------   77 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~------------------   77 (135)
                      ...+||+.|+|||++.+.  .|+.++||||+||++|+|++|..||.+.+..+.+..+.....                  
T Consensus       173 ~~~~gT~~Y~APE~~~~~--~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  250 (305)
T d1blxa_         173 TSVVVTLWYRAPEVLLQS--SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF  250 (305)
T ss_dssp             CCCCCCCTTCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGS
T ss_pred             CCcccChhhcCcchhcCC--CCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhh
Confidence            457899999999999875  699999999999999999999999998887776665532100                  


Q ss_pred             --------CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           78 --------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        78 --------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                              .......+..+.+|+.+||..||.+|||+.|+++||||+..
T Consensus       251 ~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i  299 (305)
T d1blxa_         251 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL  299 (305)
T ss_dssp             CCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             ccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCc
Confidence                    01234567889999999999999999999999999999863

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=9.5e-25  Score=147.34  Aligned_cols=98  Identities=23%  Similarity=0.442  Sum_probs=88.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      +.+||+.|+|||++.+.  .|+.++|+||+||++|+|++|+.||.+.+..+....+..+.. ..|..+++++.+|+.+||
T Consensus       164 ~~~GT~~Y~aPE~~~~~--~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~dli~~~L  240 (337)
T d1o6la_         164 TFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKSLLAGLL  240 (337)
T ss_dssp             CCEECGGGCCGGGGSSS--CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHT
T ss_pred             cceeCHHHhhhhhccCC--CCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCC-CCCccCCHHHHHHHHhhc
Confidence            47899999999999875  689999999999999999999999999988877777776664 667789999999999999


Q ss_pred             ccCCCCCCC-----HHHHhhCcCCCC
Q 032711           97 QVNPNDRPT-----AAQLMEHPFVKR  117 (135)
Q Consensus        97 ~~~p~~Rps-----~~~~l~~~~~~~  117 (135)
                      ..||.+|++     ++++++||||..
T Consensus       241 ~~dP~~R~~~~~~~~~eil~Hp~f~~  266 (337)
T d1o6la_         241 KKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             CSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             cCCchhhcccccccHHHHHcCccccc
Confidence            999999995     899999999976

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.3e-24  Score=144.61  Aligned_cols=103  Identities=24%  Similarity=0.299  Sum_probs=83.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-------------------   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-------------------   77 (135)
                      ..+||+.|+|||++... ..|+.++||||+||++|+|++|..||.+.+..+.+..+.....                   
T Consensus       159 ~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~  237 (299)
T d1ua2a_         159 HQVVTRWYRAPELLFGA-RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF  237 (299)
T ss_dssp             CSCCCCTTCCHHHHTTC-SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC
T ss_pred             ceecChhhccHHHHccC-CCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhh
Confidence            35799999999999764 3689999999999999999999999998887777665542100                   


Q ss_pred             ---CCC-----CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           78 ---PPI-----PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        78 ---~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                         +..     ....+.++.+|+.+||..||.+|||++|+++||||+....
T Consensus       238 ~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~  288 (299)
T d1ua2a_         238 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG  288 (299)
T ss_dssp             CCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSC
T ss_pred             ccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCC
Confidence               000     1245788999999999999999999999999999987543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.91  E-value=9.1e-25  Score=148.12  Aligned_cols=102  Identities=26%  Similarity=0.361  Sum_probs=88.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC---CCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP---IPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~li~   93 (135)
                      +.+||+.|+|||++.+.  .|+.++||||+||++|+|++|..||.+.+..+.+..+.......   ....++.++.+|+.
T Consensus       184 ~~~gT~~Y~aPEv~~~~--~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  261 (350)
T d1koaa2         184 VTTGTAEFAAPEVAEGK--PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR  261 (350)
T ss_dssp             EECSCTTTCCHHHHHTC--CBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHH
T ss_pred             eecCcccccCHHHHcCC--CCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHH
Confidence            46899999999999875  68999999999999999999999999988888887777665422   22457889999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                      +||..||.+||++.+++.||||+....
T Consensus       262 ~~L~~dP~~R~t~~eil~hp~~~~~~~  288 (350)
T d1koaa2         262 KLLLADPNTRMTIHQALEHPWLTPGNA  288 (350)
T ss_dssp             HHCCSSGGGSCCHHHHHHSTTTSCTTC
T ss_pred             HHccCChhHCcCHHHHhcCcccCCCCC
Confidence            999999999999999999999987544

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.2e-24  Score=145.76  Aligned_cols=99  Identities=23%  Similarity=0.420  Sum_probs=89.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      +.+||+.|+|||++.+.  .|+.++||||+||++|+|++|..||.+.+..+....+..... ..+..+++++.+++.+||
T Consensus       160 ~~~Gt~~Y~APE~l~~~--~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~L  236 (316)
T d1fota_         160 TLCGTPDYIAPEVVSTK--PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL-RFPPFFNEDVKDLLSRLI  236 (316)
T ss_dssp             CCCSCTTTCCHHHHTTC--CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHT
T ss_pred             cccCcccccCHHHHcCC--CCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHh
Confidence            57899999999999875  689999999999999999999999999988888888877665 566778999999999999


Q ss_pred             ccCCCCCC-----CHHHHhhCcCCCCC
Q 032711           97 QVNPNDRP-----TAAQLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rp-----s~~~~l~~~~~~~~  118 (135)
                      ..||.+|+     +++++++||||++.
T Consensus       237 ~~dp~~R~~~~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         237 TRDLSQRLGNLQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             CSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             hhCHHhccccchhhHHHHHcCcccccC
Confidence            99999996     89999999999874

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.2e-24  Score=144.32  Aligned_cols=101  Identities=25%  Similarity=0.382  Sum_probs=87.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCC---CCCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPP---IPDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~li~   93 (135)
                      +.+||+.|+|||++.+.  .++.++||||+|+++|+|++|..||.+.+..+.+..+.......   .+..++..+.+|+.
T Consensus       175 ~~~~t~~y~APE~~~~~--~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  252 (293)
T d1jksa_         175 NIFGTPEFVAPEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR  252 (293)
T ss_dssp             CCCCCGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHH
T ss_pred             ccCCCCcccCHHHHcCC--CCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHH
Confidence            46899999999999874  68999999999999999999999999988888887777665422   23467889999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                      +||..||.+||+++++++||||+...
T Consensus       253 ~~L~~dP~~R~s~~eil~hp~~~~~~  278 (293)
T d1jksa_         253 RLLVKDPKKRMTIQDSLQHPWIKPKD  278 (293)
T ss_dssp             TTSCSSGGGSCCHHHHHHSTTTCC--
T ss_pred             HHccCChhHCcCHHHHhcCcccCCCC
Confidence            99999999999999999999998643

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=1.8e-24  Score=146.66  Aligned_cols=110  Identities=26%  Similarity=0.419  Sum_probs=93.3

Q ss_pred             hhhhhhhhhh----hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCC
Q 032711            6 VEGLGNALRR----KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIP   81 (135)
Q Consensus         6 ~~~~~~~~~~----~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~   81 (135)
                      +.|+|.+...    .+.+||+.|+|||++.+.  .|+.++||||+||++|+|++|..||.+.+....+..+..... ..+
T Consensus       182 L~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~--~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~-~~p  258 (350)
T d1rdqe_         182 VTDFGFAKRVKGRTWTLCGTPEALAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFP  258 (350)
T ss_dssp             ECCCTTCEECSSCBCCCEECGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCC
T ss_pred             eeeceeeeecccccccccCccccCCHHHHcCC--CCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCC-CCC
Confidence            4555544322    346899999999999875  689999999999999999999999999888888888777654 556


Q ss_pred             CcccHHHHHHHHHhcccCCCCCC-----CHHHHhhCcCCCCC
Q 032711           82 DSVSRDARDFILKCLQVNPNDRP-----TAAQLMEHPFVKRP  118 (135)
Q Consensus        82 ~~~~~~~~~li~~~l~~~p~~Rp-----s~~~~l~~~~~~~~  118 (135)
                      ..+++++.+++.+||..||.+|+     +++++++||||++.
T Consensus       259 ~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         259 SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence            78899999999999999999995     89999999999864

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.1e-24  Score=146.20  Aligned_cols=99  Identities=19%  Similarity=0.376  Sum_probs=88.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..+||+.|+|||++.+.  .|+.++||||+||++|+|++|+.||.+.+.......+..+.. ..|..+++++.+|+.+||
T Consensus       162 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-~~p~~~s~~~~dli~~~L  238 (320)
T d1xjda_         162 TFCGTPDYIAPEILLGQ--KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP-FYPRWLEKEAKDLLVKLF  238 (320)
T ss_dssp             CCCSCGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHS
T ss_pred             ccCCCCCcCCHHHHcCC--CCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-CCCccCCHHHHHHHHHhc
Confidence            35899999999999875  689999999999999999999999999888888777776654 567778999999999999


Q ss_pred             ccCCCCCCCHH-HHhhCcCCCCC
Q 032711           97 QVNPNDRPTAA-QLMEHPFVKRP  118 (135)
Q Consensus        97 ~~~p~~Rps~~-~~l~~~~~~~~  118 (135)
                      ..||.+||++. ++++||||+..
T Consensus       239 ~~dP~~R~s~~~~l~~hpff~~~  261 (320)
T d1xjda_         239 VREPEKRLGVRGDIRQHPLFREI  261 (320)
T ss_dssp             CSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             ccCCCCCcCHHHHHHhCchhccC
Confidence            99999999996 89999999863

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.90  E-value=7.2e-24  Score=143.77  Aligned_cols=111  Identities=26%  Similarity=0.428  Sum_probs=93.5

Q ss_pred             hhhhhhhhh------hhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC-
Q 032711            6 VEGLGNALR------RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-   78 (135)
Q Consensus         6 ~~~~~~~~~------~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~-   78 (135)
                      +.|+|.+..      ..+.+||+.|+|||++.+.  .|+.++||||+||++|+|++|..||.+.+..+.+..+...... 
T Consensus       170 L~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~  247 (352)
T d1koba_         170 IIDFGLATKLNPDEIVKVTTATAEFAAPEIVDRE--PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEF  247 (352)
T ss_dssp             ECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTC--CBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCC
T ss_pred             EeecccceecCCCCceeeccCcccccCHHHHcCC--CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence            455664432      2346899999999999875  6899999999999999999999999998888888887766542 


Q ss_pred             --CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           79 --PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        79 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                        ..+..+++++.+|+.+||..||.+||++.++++||||+..
T Consensus       248 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         248 DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence              2335688999999999999999999999999999999864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.90  E-value=1.2e-23  Score=143.31  Aligned_cols=112  Identities=23%  Similarity=0.350  Sum_probs=86.9

Q ss_pred             hhhhhhhhh-----hhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH--HHHHHHHcCCCC
Q 032711            6 VEGLGNALR-----RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV--QALFKIARGELP   78 (135)
Q Consensus         6 ~~~~~~~~~-----~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~--~~~~~i~~~~~~   78 (135)
                      +.|+|.+..     ....+||+.|+|||++... ..|+.++||||+||++|+|++|+.||.+.+..  ..+.........
T Consensus       148 l~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~-~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~  226 (364)
T d1omwa3         148 ISDLGLACDFSKKKPHASVGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV  226 (364)
T ss_dssp             ECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCC
T ss_pred             EeeeceeeecCCCcccccccccccchhHHhhcC-CCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCC
Confidence            455554432     2346899999999999753 36899999999999999999999999765432  222233333334


Q ss_pred             CCCCcccHHHHHHHHHhcccCCCCCCC-----HHHHhhCcCCCCC
Q 032711           79 PIPDSVSRDARDFILKCLQVNPNDRPT-----AAQLMEHPFVKRP  118 (135)
Q Consensus        79 ~~~~~~~~~~~~li~~~l~~~p~~Rps-----~~~~l~~~~~~~~  118 (135)
                      ..+..+++++.+|+.+||..||.+|++     ++++++||||++.
T Consensus       227 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         227 ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             CCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred             CCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence            567789999999999999999999999     7999999999864

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1e-23  Score=141.56  Aligned_cols=103  Identities=29%  Similarity=0.458  Sum_probs=77.4

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHH---------------------------
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQA---------------------------   68 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~---------------------------   68 (135)
                      .+.+||+.|+|||++.+.  .|+.++||||+||++|+|++|+.||.+.+....                           
T Consensus       161 ~~~~GT~~Y~APEvl~~~--~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (322)
T d1s9ja_         161 NSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS  238 (322)
T ss_dssp             ---CCSSCCCCHHHHHCS--CCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-----------------------
T ss_pred             ccccCCccccCchHHcCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccc
Confidence            457999999999999885  699999999999999999999999976432111                           


Q ss_pred             ---------------HHHHHcCCCCCCC-CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           69 ---------------LFKIARGELPPIP-DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        69 ---------------~~~i~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                                     ...+.....+..+ ...+.++.+|+.+||..||.+||+++|+++||||+....
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~~  306 (322)
T d1s9ja_         239 SYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA  306 (322)
T ss_dssp             -------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred             ccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCCc
Confidence                           1111111111122 235789999999999999999999999999999986433

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7e-24  Score=139.43  Aligned_cols=95  Identities=24%  Similarity=0.403  Sum_probs=79.3

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      .+.+||+.|+|||++.+. ..++.++||||+||++|+|++|..||.+.+      .+.+... ..+..++.++.+++.+|
T Consensus       167 ~~~~GT~~y~aPE~~~~~-~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i~~~~~-~~~~~~s~~~~~li~~~  238 (273)
T d1xwsa_         167 TDFDGTRVYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV-FFRQRVSSECQHLIRWC  238 (273)
T ss_dssp             CCCCSCGGGSCHHHHHHS-CBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCC-CCSSCCCHHHHHHHHHH
T ss_pred             cccccCCCcCCHHHHcCC-CCCCcccccccceeeehhHhhCCCCCCCch------HHhhccc-CCCCCCCHHHHHHHHHH
Confidence            346899999999999875 245678999999999999999999997643      2233332 45667899999999999


Q ss_pred             cccCCCCCCCHHHHhhCcCCCCC
Q 032711           96 LQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      |..||.+|||++|+++||||+..
T Consensus       239 L~~dp~~R~s~~eil~hp~~~~~  261 (273)
T d1xwsa_         239 LALRPSDRPTFEEIQNHPWMQDV  261 (273)
T ss_dssp             TCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             ccCCHhHCcCHHHHhcCHhhCCC
Confidence            99999999999999999999864

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=5.4e-24  Score=140.27  Aligned_cols=97  Identities=19%  Similarity=0.331  Sum_probs=83.7

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...||+.|+|||++...  .++.++||||+|+++||+++ |..||.+.+..+....+.++..++.|..++.++.+++.+|
T Consensus       169 ~~~gt~~y~APE~l~~~--~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~c  246 (277)
T d1xbba_         169 HGKWPVKWYAPECINYY--KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC  246 (277)
T ss_dssp             --CCCGGGCCHHHHHHC--EEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccCCCceecCchhhcCC--CCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHH
Confidence            35789999999999874  68999999999999999997 8999999888777777877777778888999999999999


Q ss_pred             cccCCCCCCCHHHHh---hCcCC
Q 032711           96 LQVNPNDRPTAAQLM---EHPFV  115 (135)
Q Consensus        96 l~~~p~~Rps~~~~l---~~~~~  115 (135)
                      |..||.+||++++++   +|.|+
T Consensus       247 l~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         247 WTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             TCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             cCCCHhHCcCHHHHHHHhhCHHh
Confidence            999999999999884   45443

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.88  E-value=6.6e-23  Score=134.99  Aligned_cols=103  Identities=25%  Similarity=0.463  Sum_probs=87.1

Q ss_pred             hcccccccccchhhhhcc----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC---CCCCcccHHH
Q 032711           16 KWHVSRWNSLTDQVVNSK----NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP---PIPDSVSRDA   88 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~----~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~   88 (135)
                      ...+||+.|+|||.+.+.    ...++.++||||+|+++|+|++|..||.+.+.......+..+...   +....+++++
T Consensus       167 ~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  246 (277)
T d1phka_         167 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTV  246 (277)
T ss_dssp             CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHH
T ss_pred             eeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHH
Confidence            346899999999998742    235788999999999999999999999999888877777766542   2234688999


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           89 RDFILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        89 ~~li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      .+++.+||..+|.+||++.++++||||+..
T Consensus       247 ~~li~~~L~~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         247 KDLVSRFLVVQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             HHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence            999999999999999999999999999864

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.4e-22  Score=135.65  Aligned_cols=100  Identities=25%  Similarity=0.347  Sum_probs=78.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC--CC-CCC-------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG--EL-PPI-------------   80 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~--~~-~~~-------------   80 (135)
                      +.+||+.|+|||++.+. ..|+.++||||+|+++++|++|+.||.+.+.......+...  .. ...             
T Consensus       180 ~~~gT~~Y~aPE~~~~~-~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  258 (318)
T d3blha1         180 NRVVTLWYRPPELLLGE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKL  258 (318)
T ss_dssp             SCCSCGGGCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC------
T ss_pred             ceecCHHHhhHHHHcCC-CCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhh
Confidence            35799999999999865 36899999999999999999999999887766555443221  11 000             


Q ss_pred             ------C---------CcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           81 ------P---------DSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        81 ------~---------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                            .         ...++.+.+|+.+||..||++|+|++|++.||||..
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~  310 (318)
T d3blha1         259 ELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS  310 (318)
T ss_dssp             -CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSS
T ss_pred             cccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhcc
Confidence                  0         012556789999999999999999999999999985

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.6e-22  Score=132.65  Aligned_cols=114  Identities=25%  Similarity=0.386  Sum_probs=87.3

Q ss_pred             hhhhhhhhhhh-------cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC-
Q 032711            6 VEGLGNALRRK-------WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL-   77 (135)
Q Consensus         6 ~~~~~~~~~~~-------~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~-   77 (135)
                      +.|+|.+....       ..+||+.|+|||++... ..++.++|+||+|+++|+|++|+.||.+.+..+.+..+.+... 
T Consensus       143 l~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~-~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~  221 (298)
T d1gz8a_         143 LADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC-KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT  221 (298)
T ss_dssp             ECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             eccCCcceeccCCcccceeecccceeeehhhhccc-cCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCC
Confidence            45565553332       24899999999998875 3568899999999999999999999998887766655432100 


Q ss_pred             -C---------------C-----------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           78 -P---------------P-----------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        78 -~---------------~-----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                       .               .           ....++.++.+|+.+||..||.+||+++|+++||||+....
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~  291 (298)
T d1gz8a_         222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK  291 (298)
T ss_dssp             CCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             CchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCC
Confidence             0               0           01245688999999999999999999999999999986543

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=7.3e-23  Score=135.30  Aligned_cols=98  Identities=18%  Similarity=0.292  Sum_probs=85.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...||+.|+|||++...  .++.++||||+|+++||+++ |..||.+.+..+....+..+..+..|..++.++.+++.+|
T Consensus       171 ~~~gt~~y~aPE~~~~~--~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c  248 (285)
T d1u59a_         171 AGKWPLKWYAPECINFR--KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDC  248 (285)
T ss_dssp             SSCCCGGGCCHHHHHHC--EECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHT
T ss_pred             ccccCccccChHHHhCC--CCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHH
Confidence            34688999999999875  68999999999999999997 8999998887777778887777778888999999999999


Q ss_pred             cccCCCCCCCHHHH---hhCcCCC
Q 032711           96 LQVNPNDRPTAAQL---MEHPFVK  116 (135)
Q Consensus        96 l~~~p~~Rps~~~~---l~~~~~~  116 (135)
                      |..+|.+||++.++   +++.|++
T Consensus       249 l~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         249 WIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cCCCHhHCcCHHHHHHHHHHHHHH
Confidence            99999999999887   4566654

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.87  E-value=4.2e-22  Score=131.52  Aligned_cols=99  Identities=28%  Similarity=0.424  Sum_probs=79.6

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCC--------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGEL--------------------   77 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~--------------------   77 (135)
                      ..|++.|+|||.+... ..++.++|+||+|+++++|++|+.||.+.+..+.+.++.....                    
T Consensus       160 ~~~~~~y~~pE~~~~~-~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T d1ob3a_         160 EIVTLWYRAPDVLMGS-KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF  238 (286)
T ss_dssp             --CCCTTCCHHHHTTC-CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred             ecccchhhhHHHHhCC-CCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccc
Confidence            4789999999999875 3679999999999999999999999988877666655432000                    


Q ss_pred             --------CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCC
Q 032711           78 --------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR  117 (135)
Q Consensus        78 --------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~  117 (135)
                              ......+++.+.+|+.+||+.||++||+++|+++||||+.
T Consensus       239 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             ccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence                    0112446789999999999999999999999999999973

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.3e-22  Score=130.43  Aligned_cols=93  Identities=19%  Similarity=0.271  Sum_probs=84.2

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..||+.|+|||++...  .++.++||||+|+++|||++ |+.||.+.+..+....+..+.....|...++++.+++.+||
T Consensus       161 ~~~t~~y~aPE~~~~~--~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl  238 (258)
T d1k2pa_         161 SKFPVRWSPPEVLMYS--KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCW  238 (258)
T ss_dssp             SCCCGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTT
T ss_pred             cCCCCCcCCcHHhcCC--CCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccccHHHHHHHHHHc
Confidence            5689999999999875  68999999999999999998 89999998888888888877766778888999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..+|++||+++++++|
T Consensus       239 ~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         239 HEKADERPTFKILLSN  254 (258)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCCHhHCcCHHHHHHH
Confidence            9999999999999876

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3e-23  Score=139.89  Aligned_cols=99  Identities=20%  Similarity=0.406  Sum_probs=77.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHH----HcCCCCCCC----CcccHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKI----ARGELPPIP----DSVSRDA   88 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i----~~~~~~~~~----~~~~~~~   88 (135)
                      ..+||+.|+|||++.+.  .|+.++||||+||++|+|++|..||.+.+.......+    ..... ..+    ..+++++
T Consensus       172 ~~~gt~~y~aPE~~~~~--~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~s~~~  248 (335)
T d2ozaa1         172 TPCYTPYYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY-EFPNPEWSEVSEEV  248 (335)
T ss_dssp             CCSCCCSSCCCCCCCGG--GGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSS-SCCTTHHHHSCHHH
T ss_pred             cccCCcccCCcHHHcCC--CCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCC-CCCCcccccCCHHH
Confidence            46899999999999875  6899999999999999999999999765433332222    21221 122    2468899


Q ss_pred             HHHHHHhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           89 RDFILKCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        89 ~~li~~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      .+|+.+||..||.+||++.+++.||||...
T Consensus       249 ~~li~~~L~~dP~~R~s~~eil~hp~~~~~  278 (335)
T d2ozaa1         249 KMLIRNLLKTEPTQRMTITEFMNHPWIMQS  278 (335)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHHSHHHHTT
T ss_pred             HHHHHHHccCChhHCcCHHHHHcCHHhhCC
Confidence            999999999999999999999999999753

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=8e-22  Score=130.11  Aligned_cols=92  Identities=20%  Similarity=0.380  Sum_probs=77.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCC-CCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~-~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..||+.|+|||++.+.  .++.++||||+|+++|||+++. +++...+..+....+..+..++.+..++..+.+++.+||
T Consensus       173 ~~gt~~Y~APE~l~~~--~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  250 (283)
T d1mqba_         173 GKIPIRWTAPEAISYR--KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCW  250 (283)
T ss_dssp             -CCCGGGSCHHHHHSC--CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHT
T ss_pred             CCCCccccCHHHHccC--CCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhHHHHHHHHHHHC
Confidence            4689999999999874  7899999999999999999854 555556666666677766666777889999999999999


Q ss_pred             ccCCCCCCCHHHHhh
Q 032711           97 QVNPNDRPTAAQLME  111 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~  111 (135)
                      ..+|++||++.++++
T Consensus       251 ~~~p~~RPt~~eil~  265 (283)
T d1mqba_         251 QQERARRPKFADIVS  265 (283)
T ss_dssp             CSSTTTSCCHHHHHH
T ss_pred             cCCHhHCcCHHHHHH
Confidence            999999999999865

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=9.2e-23  Score=136.80  Aligned_cols=100  Identities=22%  Similarity=0.314  Sum_probs=87.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCCCC---CCcccHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELPPI---PDSVSRDARDFIL   93 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~li~   93 (135)
                      ..+||+.|+|||...+.  .|+.++||||+||++|+|++|..||.+.+..+.+..+.+......   ...++.++.+|+.
T Consensus       162 ~~~~t~~y~ape~~~~~--~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  239 (321)
T d1tkia_         162 LLFTAPEYYAPEVHQHD--VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVD  239 (321)
T ss_dssp             EEESCGGGSCHHHHTTC--EECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHH
T ss_pred             ccccccccccchhccCC--CCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHH
Confidence            35789999999999875  689999999999999999999999999988888888877665221   2357899999999


Q ss_pred             HhcccCCCCCCCHHHHhhCcCCCCC
Q 032711           94 KCLQVNPNDRPTAAQLMEHPFVKRP  118 (135)
Q Consensus        94 ~~l~~~p~~Rps~~~~l~~~~~~~~  118 (135)
                      +||..||.+||++.++++||||...
T Consensus       240 ~~L~~dp~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         240 RLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             TTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             HHccCChhHCcCHHHHhcCHhhccC
Confidence            9999999999999999999999753

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.8e-22  Score=131.67  Aligned_cols=94  Identities=21%  Similarity=0.432  Sum_probs=82.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...||+.|+|||++...  .++.++||||+|+++|||++ |.+||.+.+..+....+..+...+.+..++.++.+++.+|
T Consensus       168 ~~~gt~~y~apE~l~~~--~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c  245 (273)
T d1mp8a_         168 KGKLPIKWMAPESINFR--RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKC  245 (273)
T ss_dssp             ---CCGGGCCHHHHHHC--CCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             ceecCcccchhhHhccC--CCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence            45789999999999875  68999999999999999987 8999988887777777887777778888999999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032711           96 LQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~  112 (135)
                      |..||.+||++.+++++
T Consensus       246 l~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         246 WAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cCCCHhHCcCHHHHHHH
Confidence            99999999999998864

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.7e-22  Score=135.69  Aligned_cols=94  Identities=17%  Similarity=0.300  Sum_probs=78.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHH-cCCCCCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIA-RGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~li~~   94 (135)
                      +..||+.|+|||++...  .++.++||||+||++|||++ |..||.+.+....+..+. .+..++.|..+++++.+|+.+
T Consensus       225 ~~~gt~~y~aPE~l~~~--~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~  302 (325)
T d1rjba_         225 NARLPVKWMAPESLFEG--IYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQS  302 (325)
T ss_dssp             TEEECGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             cccCCCccCChHHHcCC--CCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHH
Confidence            34679999999999875  68999999999999999997 899998766544554444 333456677889999999999


Q ss_pred             hcccCCCCCCCHHHHhhC
Q 032711           95 CLQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~  112 (135)
                      ||+.+|.+||+++++++|
T Consensus       303 cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         303 CWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HcCCChhHCcCHHHHHHH
Confidence            999999999999999865

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=8.1e-22  Score=133.53  Aligned_cols=108  Identities=19%  Similarity=0.287  Sum_probs=85.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC-------------------CC
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG-------------------EL   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~-------------------~~   77 (135)
                      +.+||..|+|||++.+. ..++.++||||+||++|+|++|..||...+..+.+..+.+.                   ..
T Consensus       181 ~~~gt~~y~aPE~~~~~-~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~  259 (350)
T d1q5ka_         181 SYICSRYYRAPELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKF  259 (350)
T ss_dssp             SCCSCTTSCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCC
T ss_pred             cccccccccChHHhhcc-cCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccc
Confidence            45899999999998764 36899999999999999999999999888776665544320                   00


Q ss_pred             C---------CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCCCCCCC
Q 032711           78 P---------PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL  125 (135)
Q Consensus        78 ~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~~~~~~  125 (135)
                      .         ......++++.+|+.+||..||.+|||+.|+++||||+........+
T Consensus       260 ~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~  316 (350)
T d1q5ka_         260 PQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKL  316 (350)
T ss_dssp             CCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCTTCCC
T ss_pred             cccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccCCCCCC
Confidence            0         01234678999999999999999999999999999998754444333

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.2e-21  Score=132.39  Aligned_cols=102  Identities=26%  Similarity=0.351  Sum_probs=81.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCC--------------------
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGE--------------------   76 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~--------------------   76 (135)
                      ..+||+.|+|||++.+. ..++.++||||+||++++|++|..||.+.+....+..+....                    
T Consensus       177 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (346)
T d1cm8a_         177 GYVVTRWYRAPEVILNW-MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYM  255 (346)
T ss_dssp             SSCSCGGGCCTHHHHTT-TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHH
T ss_pred             cccccccccCHHHHcCC-CCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhh
Confidence            46899999999999864 357899999999999999999999998877655543322100                    


Q ss_pred             -----C-----CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           77 -----L-----PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        77 -----~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                           .     .......++.+.+|+.+||..||.+|||+.++++||||+...
T Consensus       256 ~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         256 KGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             HHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             ccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence                 0     012245678999999999999999999999999999998643

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7e-22  Score=129.17  Aligned_cols=93  Identities=20%  Similarity=0.317  Sum_probs=78.7

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..||+.|+|||++...  .|+.++||||+|+++||+++ |.+++...+..+....+..+.....|...++++.+++.+||
T Consensus       162 ~~gt~~y~aPE~l~~~--~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl  239 (263)
T d1sm2a_         162 TKFPVKWASPEVFSFS--RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW  239 (263)
T ss_dssp             ---CTTSCCHHHHTTC--CCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             eecCcccCChHHhcCC--CCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHc
Confidence            5789999999999874  69999999999999999998 56677777777777777777666677788999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..||.+||++++++++
T Consensus       240 ~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         240 KERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCCHhHCcCHHHHHHH
Confidence            9999999999999874

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=1.5e-21  Score=129.71  Aligned_cols=93  Identities=19%  Similarity=0.379  Sum_probs=80.8

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..||+.|+|||++...  .++.++||||+|+++|||++ |..||.+....+....+..+...+.+..++..+.+++.+||
T Consensus       193 ~~~t~~y~aPE~~~~~--~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  270 (299)
T d1jpaa_         193 GKIPIRWTAPEAIQYR--KFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCW  270 (299)
T ss_dssp             ---CGGGSCHHHHHSC--CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             ccCCccccCHHHHhcC--CCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHc
Confidence            3578899999999874  68999999999999999997 89999998888888888777666778889999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      +.+|.+||++.+++++
T Consensus       271 ~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         271 QKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             CSSTTTSCCHHHHHHH
T ss_pred             CCCHhHCcCHHHHHHH
Confidence            9999999999988753

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=5.9e-22  Score=130.37  Aligned_cols=97  Identities=18%  Similarity=0.427  Sum_probs=76.5

Q ss_pred             hcccccccccchhhhhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHH-HHHHcCCCC----CCCCcccHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKN-GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQAL-FKIARGELP----PIPDSVSRDAR   89 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~-~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~-~~i~~~~~~----~~~~~~~~~~~   89 (135)
                      .+..||+.|+|||++.... ..|+.++||||+|+++|||++|+.||.+.+....+ ..+..+...    ..+..+++++.
T Consensus       164 ~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~  243 (276)
T d1uwha_         164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK  243 (276)
T ss_dssp             --CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHH
T ss_pred             cccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHH
Confidence            4568999999999997532 35899999999999999999999999876654443 333333322    24566889999


Q ss_pred             HHHHHhcccCCCCCCCHHHHhhC
Q 032711           90 DFILKCLQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps~~~~l~~  112 (135)
                      +++.+||..+|.+||++.+++++
T Consensus       244 ~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         244 RLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999999999999999999865

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.4e-21  Score=131.09  Aligned_cols=103  Identities=23%  Similarity=0.354  Sum_probs=80.6

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH---HHHHHHHcCCCCCCCCcccHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWV---QALFKIARGELPPIPDSVSRDARDFI   92 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~li   92 (135)
                      .+..|++.|++||.+......++.++||||+||++|+|++|+.||.+.+..   ..+.........+.+..++.++.+|+
T Consensus       188 ~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  267 (322)
T d1vzoa_         188 YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLI  267 (322)
T ss_dssp             CGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred             cccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCCHHHHHHH
Confidence            346799999999999875445788999999999999999999999765432   22222222233456678999999999


Q ss_pred             HHhcccCCCCCCC-----HHHHhhCcCCCCC
Q 032711           93 LKCLQVNPNDRPT-----AAQLMEHPFVKRP  118 (135)
Q Consensus        93 ~~~l~~~p~~Rps-----~~~~l~~~~~~~~  118 (135)
                      .+||..||.+|++     ++|+++||||+..
T Consensus       268 ~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i  298 (322)
T d1vzoa_         268 QRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  298 (322)
T ss_dssp             HHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             HHHcccCHHHcCCCCcccHHHHHcCHhhcCC
Confidence            9999999999994     8999999999863

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3.6e-22  Score=131.13  Aligned_cols=98  Identities=22%  Similarity=0.374  Sum_probs=83.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...||+.|+|||++...  .++.++||||+|+++|||++| .+++...+..+....+..+..+..+..++.++.+++.+|
T Consensus       169 ~~~gt~~y~APE~~~~~--~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c  246 (272)
T d1qpca_         169 GAKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLC  246 (272)
T ss_dssp             TCCCCTTTSCHHHHHHC--EECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccCCcccccChHHHhCC--CCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHHHHHH
Confidence            35789999999999874  689999999999999999995 555666667777777777766677888999999999999


Q ss_pred             cccCCCCCCCHHHHhh--CcCCC
Q 032711           96 LQVNPNDRPTAAQLME--HPFVK  116 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~--~~~~~  116 (135)
                      |..+|.+||++.++++  ++||.
T Consensus       247 l~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         247 WKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCCCHhHCcCHHHHHHHhhhhhh
Confidence            9999999999999986  67764

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6.8e-22  Score=132.32  Aligned_cols=93  Identities=24%  Similarity=0.415  Sum_probs=80.5

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..||+.|+|||++.+.  .|+.++||||+|+++|||++ |..||.+.+..+....+..+..++.+..++..+.+++.+||
T Consensus       173 ~~gt~~y~APE~l~~~--~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl  250 (317)
T d1xkka_         173 GKVPIKWMALESILHR--IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW  250 (317)
T ss_dssp             --CCTTTSCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCTTBCHHHHHHHHHHT
T ss_pred             cccCccccChHHHhcC--CCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHhC
Confidence            4689999999999875  68999999999999999998 78899887766666667677666778889999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..+|.+||++.+++.|
T Consensus       251 ~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         251 MIDADSRPKFRELIIE  266 (317)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             CCChhhCcCHHHHHHH
Confidence            9999999999998765

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.3e-21  Score=128.03  Aligned_cols=100  Identities=21%  Similarity=0.367  Sum_probs=84.4

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..||+.|+|||++...  .++.++||||+|+++|||++| .+++.+....+.+..+.++...+.+..++.++.+++.+||
T Consensus       174 ~~gt~~y~aPE~~~~~--~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  251 (285)
T d1fmka3         174 AKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW  251 (285)
T ss_dssp             --CCGGGSCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             ccccccccChHHHhCC--CCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccCHHHHHHHHHHc
Confidence            5789999999999874  689999999999999999995 4555666667777777777666778889999999999999


Q ss_pred             ccCCCCCCCHHHHhh--CcCCCCCC
Q 032711           97 QVNPNDRPTAAQLME--HPFVKRPL  119 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~--~~~~~~~~  119 (135)
                      +.||++||++++++.  ++||....
T Consensus       252 ~~dP~~Rps~~~i~~~L~~~~~~~~  276 (285)
T d1fmka3         252 RKEPEERPTFEYLQAFLEDYFTSTE  276 (285)
T ss_dssp             CSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             ccCHhHCcCHHHHHHHHhhhhcCCC
Confidence            999999999999876  88887654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=2.5e-21  Score=128.74  Aligned_cols=93  Identities=16%  Similarity=0.432  Sum_probs=83.1

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCC-CCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~-~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      +..|++.|+|||++...  .|+.++||||+|+++|||+++. +||.+.+..+....+..+..+..+..+++++.+++.+|
T Consensus       201 ~~~~~~~y~aPE~~~~~--~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~c  278 (301)
T d1lufa_         201 NDAIPIRWMPPESIFYN--RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLC  278 (301)
T ss_dssp             -CCBCGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             CCCcCcCcCCHHHHccC--CCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHH
Confidence            45788999999999875  6999999999999999999985 68888888888888888887778888999999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032711           96 LQVNPNDRPTAAQLME  111 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~  111 (135)
                      |+.+|.+||++.++++
T Consensus       279 l~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         279 WSKLPADRPSFCSIHR  294 (301)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             cCCChhHCcCHHHHHH
Confidence            9999999999999864

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=8.3e-22  Score=130.87  Aligned_cols=94  Identities=23%  Similarity=0.440  Sum_probs=78.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCcHHH-HHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQ-ALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g-~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ..+||+.|+|||++.+.  .++.++||||+|+++|||+++ .+||.+.+... ....+..+..+..+..+++++.+++.+
T Consensus       195 ~~~gt~~y~APE~l~~~--~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  272 (299)
T d1ywna1         195 DARLPLKWMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD  272 (299)
T ss_dssp             SCCCGGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHH
T ss_pred             ceeeCccccchhHhhcC--CCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHH
Confidence            45899999999999875  689999999999999999986 56787655433 334455565567788899999999999


Q ss_pred             hcccCCCCCCCHHHHhhC
Q 032711           95 CLQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~~  112 (135)
                      ||..||.+||++.++++|
T Consensus       273 cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         273 CWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HcCCChhHCcCHHHHHHH
Confidence            999999999999999875

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=4.5e-22  Score=135.03  Aligned_cols=102  Identities=24%  Similarity=0.378  Sum_probs=76.6

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHc---------------------
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIAR---------------------   74 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~---------------------   74 (135)
                      ...+||+.|+|||++.+.  .++.++||||+||++++|++|+.||.+.+......++..                     
T Consensus       176 ~~~~~t~~y~aPE~l~~~--~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  253 (355)
T d2b1pa1         176 TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV  253 (355)
T ss_dssp             -----CCTTCCHHHHTTC--CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHH
T ss_pred             ccccccccccChhhhcCC--CCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHh
Confidence            445899999999999874  689999999999999999999999988776555443321                     


Q ss_pred             -CCCCC-------------C------CCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           75 -GELPP-------------I------PDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        75 -~~~~~-------------~------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                       .....             .      ....+.++.+|+.+||..||++||+++|+++||||+...
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~  318 (355)
T d2b1pa1         254 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY  318 (355)
T ss_dssp             HTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred             hcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence             00000             0      011356789999999999999999999999999998643

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.4e-21  Score=130.96  Aligned_cols=104  Identities=25%  Similarity=0.373  Sum_probs=80.7

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcC--------------------
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARG--------------------   75 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~--------------------   75 (135)
                      ...+||+.|+|||++... ..++.++|+||+|+++++|++|..||.+.+..+........                    
T Consensus       170 ~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (345)
T d1pmea_         170 TEYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY  248 (345)
T ss_dssp             CCCCSCGGGCCGGGTTTB-CSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHH
T ss_pred             ccccccceechHHHhhcC-CCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcc
Confidence            446799999999998765 36789999999999999999999999877654443332110                    


Q ss_pred             ----CC-C-----CCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           76 ----EL-P-----PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        76 ----~~-~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                          .. .     .....++.++.+|+.+||..||.+||+++++++||||.....
T Consensus       249 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~  303 (345)
T d1pmea_         249 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD  303 (345)
T ss_dssp             HHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             cccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCC
Confidence                00 0     012345678999999999999999999999999999986544

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.85  E-value=1.6e-21  Score=128.30  Aligned_cols=98  Identities=24%  Similarity=0.365  Sum_probs=74.0

Q ss_pred             hhcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC---CCCCcccHHHHHH
Q 032711           15 RKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP---PIPDSVSRDARDF   91 (135)
Q Consensus        15 ~~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~l   91 (135)
                      ....+||+.|+|||++.+.  .++.++||||+|+++|+|++|..||.+.+..+....+......   .....++.++.++
T Consensus       171 ~~~~~Gt~~Y~aPE~~~~~--~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~l  248 (277)
T d1o6ya_         171 TAAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAV  248 (277)
T ss_dssp             --------TTCCHHHHTTC--CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHH
T ss_pred             cccccCcccccCHHHHcCC--CCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHH
Confidence            3456899999999999774  6899999999999999999999999998887777666555432   2345688999999


Q ss_pred             HHHhcccCCCCCC-CHHHHhhCcCC
Q 032711           92 ILKCLQVNPNDRP-TAAQLMEHPFV  115 (135)
Q Consensus        92 i~~~l~~~p~~Rp-s~~~~l~~~~~  115 (135)
                      +.+||..||.+|| ++++++ |+|.
T Consensus       249 i~~~L~~dp~~R~~sa~~l~-~~l~  272 (277)
T d1o6ya_         249 VLKALAKNPENRYQTAAEMR-ADLV  272 (277)
T ss_dssp             HHHHTCSSGGGSCSSHHHHH-HHHH
T ss_pred             HHHHccCCHhHCHhHHHHHH-HHHH
Confidence            9999999999999 566554 4443

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3.7e-21  Score=129.97  Aligned_cols=104  Identities=25%  Similarity=0.276  Sum_probs=82.7

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHcCCCC-----------------
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFKIARGELP-----------------   78 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~i~~~~~~-----------------   78 (135)
                      .+..|+..|+|||+..+. ..++.++|+||+|+++|+|++|..||.+.+.......+......                 
T Consensus       176 ~~~~g~~~y~apE~~~~~-~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  254 (348)
T d2gfsa1         176 TGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY  254 (348)
T ss_dssp             SSSCHHHHTSCHHHHTTC-SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHH
T ss_pred             ccccccccccCchhhcCC-ccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhh
Confidence            346789999999998775 35689999999999999999999999887766555444321110                 


Q ss_pred             -----C--------CCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           79 -----P--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        79 -----~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                           .        .....++.+.+|+.+||..||.+|+|+.|+++||||+....
T Consensus       255 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~  309 (348)
T d2gfsa1         255 IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  309 (348)
T ss_dssp             HTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             hhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCC
Confidence                 0        01346788999999999999999999999999999986543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=5.2e-21  Score=127.07  Aligned_cols=93  Identities=23%  Similarity=0.359  Sum_probs=82.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...|++.|+|||++.+.  .|+.++||||+|+++|+|++ |..||.+.+.......+..+..+..+..+++.+.+++.+|
T Consensus       196 ~~~~~~~y~aPE~l~~~--~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c  273 (299)
T d1fgka_         196 NGRLPVKWMAPEALFDR--IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDC  273 (299)
T ss_dssp             TSCCGGGGSCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHH
T ss_pred             cCCCChhhhhhhHhcCC--CCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHH
Confidence            46789999999999874  79999999999999999997 7888888887777777777766777888999999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032711           96 LQVNPNDRPTAAQLME  111 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~  111 (135)
                      |+.+|.+||++.++++
T Consensus       274 l~~dP~~Rps~~eil~  289 (299)
T d1fgka_         274 WHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             ccCCHhHCcCHHHHHH
Confidence            9999999999999875

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.4e-21  Score=128.36  Aligned_cols=93  Identities=25%  Similarity=0.490  Sum_probs=79.3

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCC-CCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGEL-PPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~li~~   94 (135)
                      ...|+..|+|||++.+.  .++.++||||+|+++|||++ |..||.+.+..+....+.+... ++.+..++..+.+++.+
T Consensus       173 ~~~~~~~~~aPE~~~~~--~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~  250 (273)
T d1u46a_         173 HRKVPFAWCAPESLKTR--TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQ  250 (273)
T ss_dssp             ---CCGGGCCHHHHHHC--EEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHH
T ss_pred             ccccCcccCCHHHHhCC--CCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHHHHHHHH
Confidence            34678899999999875  68999999999999999997 8999999998888877765543 45667789999999999


Q ss_pred             hcccCCCCCCCHHHHhh
Q 032711           95 CLQVNPNDRPTAAQLME  111 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~  111 (135)
                      ||..||++||++.++++
T Consensus       251 cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         251 CWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HcCCChhHCcCHHHHHH
Confidence            99999999999999863

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3e-21  Score=126.13  Aligned_cols=93  Identities=18%  Similarity=0.321  Sum_probs=80.2

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...++..|+|||++.+.  .++.++||||+|+++|||++ |+.||...+..+....+..+..++.+..+++++.+++.+|
T Consensus       159 ~~~~~~~y~aPE~l~~~--~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c  236 (262)
T d1byga_         159 TGKLPVKWTAPEALREK--KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNC  236 (262)
T ss_dssp             ---CCTTTSCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             cccccccCCChHHHhCC--CCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHH
Confidence            35788999999999874  68999999999999999998 7888888777777777777766778888999999999999


Q ss_pred             cccCCCCCCCHHHHhh
Q 032711           96 LQVNPNDRPTAAQLME  111 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~  111 (135)
                      |..||.+||++.++++
T Consensus       237 l~~dP~~Rps~~~l~~  252 (262)
T d1byga_         237 WHLDAAMRPSFLQLRE  252 (262)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             cccCHhHCcCHHHHHH
Confidence            9999999999998875

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.5e-20  Score=124.24  Aligned_cols=94  Identities=22%  Similarity=0.352  Sum_probs=83.7

Q ss_pred             hcccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHH
Q 032711           16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTR-CRPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ....||+.|+|||.+.+.  .++.++||||+|+++|||++| .+||.+.+..+.+..+.++..++.+..++..+.+++.+
T Consensus       193 ~~~~~t~~y~aPe~l~~~--~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~  270 (308)
T d1p4oa_         193 GKGLLPVRWMSPESLKDG--VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRM  270 (308)
T ss_dssp             GSSEECGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             cceecccccCCHHHHccC--CCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCCCcccchHHHHHHHHH
Confidence            345789999999999875  689999999999999999997 57888888888888888877777788899999999999


Q ss_pred             hcccCCCCCCCHHHHhh
Q 032711           95 CLQVNPNDRPTAAQLME  111 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~  111 (135)
                      ||+.+|++||+++++++
T Consensus       271 cl~~~P~~RPs~~~il~  287 (308)
T d1p4oa_         271 CWQYNPKMRPSFLEIIS  287 (308)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HcCCChhHCcCHHHHHH
Confidence            99999999999999986

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=9.5e-21  Score=126.31  Aligned_cols=94  Identities=21%  Similarity=0.375  Sum_probs=81.0

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCC-CCCCCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHh
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRC-RPYFGVEWVQALFKIARGELPPIPDSVSRDARDFILKC   95 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~-~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~   95 (135)
                      ...||..|+|||.+...  .++.++||||+|+++|+|++|. +||.+.+..+....+..+..+..+..+++++.+++.+|
T Consensus       185 ~~~gt~~y~aPE~l~~~--~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c  262 (309)
T d1fvra_         185 MGRLPVRWMAIESLNYS--VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQC  262 (309)
T ss_dssp             ---CCTTTCCHHHHHHC--EECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHH
T ss_pred             ceecCCcccchHHhccC--CCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHH
Confidence            34689999999999874  6899999999999999999965 57888888888888877766677888999999999999


Q ss_pred             cccCCCCCCCHHHHhhC
Q 032711           96 LQVNPNDRPTAAQLMEH  112 (135)
Q Consensus        96 l~~~p~~Rps~~~~l~~  112 (135)
                      |..||++||++++++++
T Consensus       263 l~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         263 WREKPYERPSFAQILVS  279 (309)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cCCChhHCcCHHHHHHH
Confidence            99999999999999865

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.81  E-value=3.6e-20  Score=124.28  Aligned_cols=102  Identities=27%  Similarity=0.414  Sum_probs=77.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHHHc-------------CCC-----
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-VQALFKIAR-------------GEL-----   77 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~-~~~~~~i~~-------------~~~-----   77 (135)
                      ..+||+.|+|||++.+. ..++.++|+||+|++++++++|..||..... ......+..             ...     
T Consensus       188 ~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~  266 (328)
T d3bqca1         188 VRVASRYFKGPELLVDY-QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR  266 (328)
T ss_dssp             SCCSCGGGCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGG
T ss_pred             ccccCccccCcccccCC-CCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcc
Confidence            45789999999999875 3579999999999999999999999976432 222111110             000     


Q ss_pred             ------------------CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCC
Q 032711           78 ------------------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL  119 (135)
Q Consensus        78 ------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~  119 (135)
                                        ......+++++.+|+.+||..||.+|+|++|+++||||....
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~  326 (328)
T d3bqca1         267 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  326 (328)
T ss_dssp             GGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSC
T ss_pred             cchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence                              001123578899999999999999999999999999998754

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=5.1e-20  Score=121.62  Aligned_cols=91  Identities=18%  Similarity=0.321  Sum_probs=75.9

Q ss_pred             cccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCC-CCCcHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhcc
Q 032711           19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPY-FGVEWVQALFKIARGELPPIPDSVSRDARDFILKCLQ   97 (135)
Q Consensus        19 ~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~   97 (135)
                      .|++.|+|||++...  .|+.++||||+|+++|+|++|..|+ .+.+.......+..+..++.+..+++++.+++.+||+
T Consensus       177 ~g~~~y~aPE~~~~~--~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~  254 (287)
T d1opja_         177 KFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ  254 (287)
T ss_dssp             EECGGGCCHHHHHHC--CCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             cccccccChHHHcCC--CCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcC
Confidence            578899999999875  6899999999999999999966655 4555555555555555567778899999999999999


Q ss_pred             cCCCCCCCHHHHhh
Q 032711           98 VNPNDRPTAAQLME  111 (135)
Q Consensus        98 ~~p~~Rps~~~~l~  111 (135)
                      .||.+||++.++++
T Consensus       255 ~dP~~Rps~~ei~~  268 (287)
T d1opja_         255 WNPSDRPSFAEIHQ  268 (287)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CCHhHCcCHHHHHH
Confidence            99999999999865

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.81  E-value=3e-20  Score=125.94  Aligned_cols=109  Identities=24%  Similarity=0.414  Sum_probs=76.6

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH------HHHHHHH---Hc---------C---
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW------VQALFKI---AR---------G---   75 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~------~~~~~~i---~~---------~---   75 (135)
                      ..+||+.|+|||++...  .++.++|+||+|+++++|++|+.||...+.      .+.+...   ..         .   
T Consensus       188 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~  265 (362)
T d1q8ya_         188 NSIQTREYRSPEVLLGA--PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYT  265 (362)
T ss_dssp             SCCSCGGGCCHHHHHTC--CCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTH
T ss_pred             cccccccccChhhcccc--CCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhccccc
Confidence            45799999999999874  689999999999999999999999864321      1111111   00         0   


Q ss_pred             -----------CC---------------CCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC-CCCCCCC
Q 032711           76 -----------EL---------------PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP-TSWGLPT  127 (135)
Q Consensus        76 -----------~~---------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~-~~~~~~~  127 (135)
                                 ..               .......++++.+|+.+||..||.+|||+.|+++||||+.... .....|.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~~~~~~~~p~  344 (362)
T d1q8ya_         266 RTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPD  344 (362)
T ss_dssp             HHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTCTTCCCTT
T ss_pred             ccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCCCcccCCCCC
Confidence                       00               0011234677899999999999999999999999999985543 3344443

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=9.9e-20  Score=120.17  Aligned_cols=102  Identities=26%  Similarity=0.441  Sum_probs=77.5

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHc--CC------------------
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG-VEWVQALFKIAR--GE------------------   76 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~-~~~~~~~~~i~~--~~------------------   76 (135)
                      ..++..|.|||++... ..++.++||||+||++++|++|+.||.. .+..+.+..+..  ..                  
T Consensus       161 ~~~~~~~~~pe~~~~~-~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (292)
T d1unla_         161 EVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY  239 (292)
T ss_dssp             CCSCGGGCCHHHHTTC-SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC
T ss_pred             eccccchhhhhHhccC-CCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccccc
Confidence            3577899999998875 3579999999999999999999988654 444444443321  00                  


Q ss_pred             --------CCCCCCcccHHHHHHHHHhcccCCCCCCCHHHHhhCcCCCCCCC
Q 032711           77 --------LPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP  120 (135)
Q Consensus        77 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~~~~~~~  120 (135)
                              .......++..+.+|+.+||..||.+|||++|+++||||+...+
T Consensus       240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~~  291 (292)
T d1unla_         240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP  291 (292)
T ss_dssp             CCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCSC
T ss_pred             ccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCCC
Confidence                    00122346788999999999999999999999999999986443

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.1e-19  Score=121.30  Aligned_cols=93  Identities=17%  Similarity=0.323  Sum_probs=76.1

Q ss_pred             ccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHHHcCCCCCCCCcccHHHHHHHHHhc
Q 032711           18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWVQALFKIARGELPPIPDSVSRDARDFILKCL   96 (135)
Q Consensus        18 ~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l   96 (135)
                      ..||+.|+|||.+...  .++.++||||+|+++||+++|..||... +..+....+..+..+..|..+++++.+++.+||
T Consensus       194 ~~gt~~y~aPE~~~~~--~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl  271 (311)
T d1r0pa_         194 AKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW  271 (311)
T ss_dssp             SSCCGGGSCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             ccccccccChHHHhcC--CCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHHHHHHHHHc
Confidence            4689999999999874  6899999999999999999977776543 334445556666666777888999999999999


Q ss_pred             ccCCCCCCCHHHHhhC
Q 032711           97 QVNPNDRPTAAQLMEH  112 (135)
Q Consensus        97 ~~~p~~Rps~~~~l~~  112 (135)
                      ..||++||++.+++++
T Consensus       272 ~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         272 HPKAEMRPSFSELVSR  287 (311)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             CCCHhHCcCHHHHHHH
Confidence            9999999999999876

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=9.7e-20  Score=121.48  Aligned_cols=93  Identities=22%  Similarity=0.387  Sum_probs=75.5

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHH-HHcCCCCCCCCcccHHHHHHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWVQALFK-IARGELPPIPDSVSRDARDFILK   94 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~-g~~p~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~li~~   94 (135)
                      ..+||+.|+|||++...  .++.++||||+|+++|+|++ |.+++.+.+..+.+.. +..+..+..+...+.++.+|+.+
T Consensus       206 ~~~gt~~y~aPE~~~~~--~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~  283 (311)
T d1t46a_         206 NARLPVKWMAPESIFNC--VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKT  283 (311)
T ss_dssp             SSEECGGGCCHHHHHHC--CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHH
T ss_pred             ecccChHHcCHHHhcCC--CCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHH
Confidence            46789999999999874  68999999999999999998 5666666555444443 34444455667789999999999


Q ss_pred             hcccCCCCCCCHHHHhh
Q 032711           95 CLQVNPNDRPTAAQLME  111 (135)
Q Consensus        95 ~l~~~p~~Rps~~~~l~  111 (135)
                      ||..||.+||+++++++
T Consensus       284 cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         284 CWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HcCCChhHCcCHHHHHH
Confidence            99999999999999874

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.76  E-value=6.2e-19  Score=116.85  Aligned_cols=98  Identities=12%  Similarity=0.127  Sum_probs=72.4

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHH---HH----cCCCCCCCCcccHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWVQALFK---IA----RGELPPIPDSVSRDAR   89 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~~~~~~~~---i~----~~~~~~~~~~~~~~~~   89 (135)
                      +.+||+.|+|||++.+.  .++.++||||+|+++++|++|+.||...........   ..    ..........+++++.
T Consensus       172 ~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  249 (299)
T d1ckia_         172 NLTGTARYASINTHLGI--EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFA  249 (299)
T ss_dssp             SCCCCSSSCCHHHHTTB--CCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHH
T ss_pred             CcCCCccccCHHHHhCC--CCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHH
Confidence            45899999999999875  689999999999999999999999977554322211   11    1111122356789999


Q ss_pred             HHHHHhcccCCCCCCCHHHH---hhCcCCC
Q 032711           90 DFILKCLQVNPNDRPTAAQL---MEHPFVK  116 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps~~~~---l~~~~~~  116 (135)
                      +++.+||..+|++||+++++   +++.|.+
T Consensus       250 ~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         250 TYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             HHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence            99999999999999998754   5666543

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.68  E-value=3.4e-17  Score=108.19  Aligned_cols=92  Identities=11%  Similarity=0.092  Sum_probs=69.8

Q ss_pred             cccccccccchhhhhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc---HHHHHHHHHc----CCCCCCCCcccHHHH
Q 032711           17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE---WVQALFKIAR----GELPPIPDSVSRDAR   89 (135)
Q Consensus        17 ~~~gt~~~~aPE~~~~~~~~~~~~~dvws~G~~l~~l~~g~~p~~~~~---~~~~~~~i~~----~~~~~~~~~~~~~~~   89 (135)
                      ..+||+.|+|||++.+.  .++.++|+||+|+++|+|++|+.||.+..   ......++..    .........+++++.
T Consensus       172 ~~~GT~~y~aPE~~~~~--~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~  249 (293)
T d1csna_         172 NLSGTARYMSINTHLGR--EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFY  249 (293)
T ss_dssp             CCCSCTTTCCHHHHTTC--CCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHH
T ss_pred             ceEEchhhcCHHHhcCC--CCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHH
Confidence            46899999999999875  68999999999999999999999997533   2222222221    111122345788999


Q ss_pred             HHHHHhcccCCCCCCCHHHHh
Q 032711           90 DFILKCLQVNPNDRPTAAQLM  110 (135)
Q Consensus        90 ~li~~~l~~~p~~Rps~~~~l  110 (135)
                      +++..|+..+|++||+.+.+.
T Consensus       250 ~ii~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         250 KYMHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             HHHHHHHHCCTTCCCCHHHHH
T ss_pred             HHHHHHhcCCcccCcCHHHHH
Confidence            999999999999999876543

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1e-16  Score=106.39  Aligned_cols=96  Identities=20%  Similarity=0.223  Sum_probs=65.2

Q ss_pred             hcccccccccchhhhhccCC----CCCchhhHHHHHHHHHHHHhCCCCCCC---------------CcHHHHHHHHHcCC
Q 032711           16 KWHVSRWNSLTDQVVNSKNG----GYGLPADIWSVGCTVLEMLTRCRPYFG---------------VEWVQALFKIARGE   76 (135)
Q Consensus        16 ~~~~gt~~~~aPE~~~~~~~----~~~~~~dvws~G~~l~~l~~g~~p~~~---------------~~~~~~~~~i~~~~   76 (135)
                      ...+||+.|+|||++.+...    .++.++||||+|+++||+++|..|+..               .........+....
T Consensus       170 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (303)
T d1vjya_         170 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK  249 (303)
T ss_dssp             --CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC
T ss_pred             cceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccc
Confidence            34689999999999876421    256789999999999999999776532               11122222222222


Q ss_pred             C-CCCCCc-----ccHHHHHHHHHhcccCCCCCCCHHHHhh
Q 032711           77 L-PPIPDS-----VSRDARDFILKCLQVNPNDRPTAAQLME  111 (135)
Q Consensus        77 ~-~~~~~~-----~~~~~~~li~~~l~~~p~~Rps~~~~l~  111 (135)
                      . +..+..     ....+.+++.+||..||.+||++.++++
T Consensus       250 ~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~  290 (303)
T d1vjya_         250 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             CCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             cCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            2 222222     2346889999999999999999999865