Your job contains 1 sequence.
>032720
MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA
IDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITS
SHFDTKVRALARKYL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032720
(135 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2198983 - symbol:AT1G80500 "AT1G80500" species... 654 3.7e-64 1
UNIPROTKB|Q3T0F2 - symbol:TRAPPC2 "Trafficking protein pa... 349 7.7e-32 1
UNIPROTKB|E2QV03 - symbol:TRAPPC2 "Trafficking protein pa... 349 7.7e-32 1
UNIPROTKB|F1SRI0 - symbol:TRAPPC2 "Trafficking protein pa... 349 7.7e-32 1
UNIPROTKB|P0DI81 - symbol:TRAPPC2 "Trafficking protein pa... 348 9.8e-32 1
UNIPROTKB|P0DI82 - symbol:TRAPPC2P1 "Trafficking protein ... 348 9.8e-32 1
RGD|1306925 - symbol:Trappc2 "trafficking protein particl... 348 9.8e-32 1
DICTYBASE|DDB_G0282887 - symbol:trappc2 "trafficking prot... 337 1.4e-30 1
POMBASE|SPBC11G11.04 - symbol:trs20 "TRAPP complex subuni... 337 1.4e-30 1
UNIPROTKB|G5EA75 - symbol:TRAPPC2 "Trafficking protein pa... 334 3.0e-30 1
RGD|6499350 - symbol:LOC100910318 "trafficking protein pa... 328 1.3e-29 1
UNIPROTKB|G1K394 - symbol:TRAPPC2 "Trafficking protein pa... 327 1.6e-29 1
ZFIN|ZDB-GENE-060929-1266 - symbol:trappc2 "trafficking p... 326 2.1e-29 1
UNIPROTKB|Q5ZKP4 - symbol:TRAPPC2 "Trafficking protein pa... 310 1.0e-27 1
FB|FBgn0263604 - symbol:l(3)72Dh "lethal (3) 72Dh" specie... 309 1.3e-27 1
UNIPROTKB|F5H785 - symbol:TRAPPC2 "Trafficking protein pa... 280 1.6e-24 1
WB|WBGene00021046 - symbol:sedl-1 species:6239 "Caenorhab... 273 8.7e-24 1
UNIPROTKB|O02173 - symbol:sedl-1 "Probable trafficking pr... 273 8.7e-24 1
SGD|S000000458 - symbol:TRS20 "Subunit of the transport p... 172 2.9e-22 2
CGD|CAL0004070 - symbol:orf19.3314 species:5476 "Candida ... 229 4.0e-19 1
UNIPROTKB|Q5A920 - symbol:TRS20 "Putative uncharacterized... 229 4.0e-19 1
ASPGD|ASPL0000007051 - symbol:AN11500 species:162425 "Eme... 121 2.0e-16 2
UNIPROTKB|E1BYR2 - symbol:TRAPPC2L "Uncharacterized prote... 149 1.2e-10 1
UNIPROTKB|E5RFG0 - symbol:TRAPPC2 "Trafficking protein pa... 148 1.5e-10 1
UNIPROTKB|F1S6M0 - symbol:TRAPPC2L "Uncharacterized prote... 148 1.5e-10 1
RGD|1304906 - symbol:Trappc2l "trafficking protein partic... 148 1.5e-10 1
MGI|MGI:1916295 - symbol:Trappc2l "trafficking protein pa... 147 2.0e-10 1
DICTYBASE|DDB_G0292690 - symbol:trappc2l "trafficking pro... 145 3.2e-10 1
UNIPROTKB|A6H7F7 - symbol:TRAPPC2L "Trafficking protein p... 143 5.2e-10 1
UNIPROTKB|Q9UL33 - symbol:TRAPPC2L "Trafficking protein p... 141 8.4e-10 1
UNIPROTKB|E2RB28 - symbol:TRAPPC2L "Uncharacterized prote... 139 1.4e-09 1
TAIR|locus:2051457 - symbol:AT2G20930 "AT2G20930" species... 137 2.2e-09 1
FB|FBgn0033605 - symbol:CG9067 species:7227 "Drosophila m... 132 7.6e-09 1
UNIPROTKB|F1MIB4 - symbol:TRAPPC2L "Trafficking protein p... 132 7.6e-09 1
UNIPROTKB|H3BP13 - symbol:TRAPPC2L "Trafficking protein p... 129 3.1e-08 1
UNIPROTKB|H3BUK6 - symbol:TRAPPC2L "Trafficking protein p... 123 6.8e-08 1
UNIPROTKB|H3BQQ8 - symbol:TRAPPC2L "Trafficking protein p... 118 2.3e-07 1
UNIPROTKB|H3BPS1 - symbol:TRAPPC2L "Trafficking protein p... 93 0.00010 1
>TAIR|locus:2198983 [details] [associations]
symbol:AT1G80500 "AT1G80500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 EMBL:CP002684 GO:GO:0005622
GO:GO:0006888 SUPFAM:SSF64356 OMA:VGHNDNP PANTHER:PTHR12403
IPI:IPI00548390 RefSeq:NP_178165.2 UniGene:At.43306
ProteinModelPortal:F4HTY0 SMR:F4HTY0 PRIDE:F4HTY0
EnsemblPlants:AT1G80500.1 GeneID:844389 KEGG:ath:AT1G80500
Uniprot:F4HTY0
Length = 135
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 126/135 (93%), Positives = 131/135 (97%)
Query: 1 MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60
MA TACFIIV RN+IPIYEAEVGSA KREDAAQLHQFILHAALD+VQDLAWTTSAMFLK+
Sbjct: 1 MANTACFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60
Query: 61 IDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120
+DRFNDLVVSVYVTAGHTR MLLHDSRN+DGIKSFFQEVHELYIKILLNPLYLPGSRITS
Sbjct: 61 VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120
Query: 121 SHFDTKVRALARKYL 135
SHFDTKVRALARKYL
Sbjct: 121 SHFDTKVRALARKYL 135
>UNIPROTKB|Q3T0F2 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9913 "Bos taurus" [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0006351 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 OMA:VGHNDNP PANTHER:PTHR12403
EMBL:BC102418 IPI:IPI00696352 RefSeq:NP_001029968.1
UniGene:Bt.13900 ProteinModelPortal:Q3T0F2 SMR:Q3T0F2 STRING:Q3T0F2
PRIDE:Q3T0F2 Ensembl:ENSBTAT00000014509 GeneID:616748
KEGG:bta:616748 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 HOVERGEN:HBG006717 InParanoid:Q3T0F2
OrthoDB:EOG49GKHT NextBio:20900300 Uniprot:Q3T0F2
Length = 140
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 66/138 (47%), Positives = 96/138 (69%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSR 117
LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK +NP Y P S
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120
Query: 118 ITSSHFDTKVRALARKYL 135
I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138
>UNIPROTKB|E2QV03 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9615 "Canis lupus familiaris" [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0006351 GO:GO:0006888
SUPFAM:SSF64356 PANTHER:PTHR12403 Uniprot:E2QV03
Length = 140
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 66/138 (47%), Positives = 96/138 (69%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSR 117
LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK +NP Y P S
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120
Query: 118 ITSSHFDTKVRALARKYL 135
I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138
>UNIPROTKB|F1SRI0 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9823 "Sus scrofa" [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0006351 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 PANTHER:PTHR12403
GeneTree:ENSGT00510000047168 EMBL:AY610478 EMBL:AK344004
EMBL:CU633939 RefSeq:NP_001231738.1 UniGene:Ssc.8205
ProteinModelPortal:F1SRI0 SMR:F1SRI0 PRIDE:F1SRI0
Ensembl:ENSSSCT00000033348 Ensembl:ENSSSCT00000034259
GeneID:100513447 KEGG:ssc:100513447 Uniprot:F1SRI0
Length = 140
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 66/138 (47%), Positives = 96/138 (69%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSR 117
LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK +NP Y P S
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120
Query: 118 ITSSHFDTKVRALARKYL 135
I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138
>UNIPROTKB|P0DI81 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0044325 "ion channel binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 GO:GO:0006355
GO:GO:0006351 GO:GO:0001501 GO:GO:0006888 SUPFAM:SSF64356
EMBL:AC003037 EMBL:AF157065 EMBL:AF157062 EMBL:AF157063
EMBL:AF157064 EMBL:AK310542 EMBL:DA542477 EMBL:DB101396
EMBL:BC016915 EMBL:BC052618 IPI:IPI00005119 IPI:IPI00940542
IPI:IPI01025157 RefSeq:NP_001011658.1 RefSeq:NP_001122307.2
RefSeq:NP_055378.1 UniGene:Hs.592238 UniGene:Hs.622292
ProteinModelPortal:P0DI81 SMR:P0DI81 IntAct:P0DI81 PRIDE:P0DI81
DNASU:6399 Ensembl:ENST00000358231 Ensembl:ENST00000359680
Ensembl:ENST00000380579 Ensembl:ENST00000419678
Ensembl:ENST00000458511 GeneID:6399 KEGG:hsa:6399 UCSC:uc010nem.2
UCSC:uc022btf.1 CTD:6399 GeneCards:GC0XM013640 HGNC:HGNC:23068
HPA:CAB004665 MIM:300202 MIM:313400 neXtProt:NX_P0DI81 OMA:VGHNDNP
ChiTaRS:TRAPPC2 GenomeRNAi:6399 NextBio:24860 ArrayExpress:P0DI81
Bgee:P0DI81 CleanEx:HS_TRAPPC2 Genevestigator:O14582
GermOnline:ENSG00000196459 PANTHER:PTHR12403 Uniprot:P0DI81
Length = 140
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 66/138 (47%), Positives = 96/138 (69%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSR 117
LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK +NP Y P S
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFSMNPFYEPNSP 120
Query: 118 ITSSHFDTKVRALARKYL 135
I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138
>UNIPROTKB|P0DI82 [details] [associations]
symbol:TRAPPC2P1 "Trafficking protein particle complex
subunit 2 protein TRAPPC2P1" species:9606 "Homo sapiens"
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005783 GO:GO:0005634 GO:GO:0005794 GO:GO:0048471
GO:GO:0006351 GO:GO:0006888 SUPFAM:SSF64356 IPI:IPI00005119
RefSeq:NP_001011658.1 RefSeq:NP_055378.1 UniGene:Hs.592238
UniGene:Hs.622292 DNASU:6399 GeneID:6399 KEGG:hsa:6399 CTD:6399
HPA:CAB004665 GenomeRNAi:6399 NextBio:24860 CleanEx:HS_TRAPPC2
PANTHER:PTHR12403 EMBL:AF291676 EMBL:AF058918 EMBL:AC003002
EMBL:BC008889 EMBL:BC032809 UniGene:Hs.446620
ProteinModelPortal:P0DI82 SMR:P0DI82 STRING:O14582 PRIDE:P0DI82
Ensembl:ENST00000543226 GeneCards:GC19P057874 HGNC:HGNC:10710
neXtProt:NX_P0DI82 ArrayExpress:P0DI82 Bgee:P0DI82 Uniprot:P0DI82
Length = 140
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 66/138 (47%), Positives = 96/138 (69%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSR 117
LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK +NP Y P S
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFSMNPFYEPNSP 120
Query: 118 ITSSHFDTKVRALARKYL 135
I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138
>RGD|1306925 [details] [associations]
symbol:Trappc2 "trafficking protein particle complex 2"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0030008 "TRAPP
complex" evidence=ISO] [GO:0044325 "ion channel binding"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
RGD:1306925 GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 CTD:6399
PANTHER:PTHR12403 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 HOVERGEN:HBG006717 OrthoDB:EOG49GKHT
EMBL:CH474014 EMBL:BC091429 IPI:IPI00212787 RefSeq:NP_001020136.1
UniGene:Rn.8274 SMR:Q5BJL8 STRING:Q5BJL8 Ensembl:ENSRNOT00000068113
GeneID:501550 KEGG:rno:501550 UCSC:RGD:1306925 InParanoid:Q5BJL8
NextBio:709167 Genevestigator:Q5BJL8 Uniprot:Q5BJL8
Length = 140
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 66/138 (47%), Positives = 96/138 (69%)
Query: 1 MATTACFIIVSRNEIPIYEAEV---GSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSR 117
LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK +NP Y P S
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120
Query: 118 ITSSHFDTKVRALARKYL 135
I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138
>DICTYBASE|DDB_G0282887 [details] [associations]
symbol:trappc2 "trafficking protein particle complex
subunit 2" species:44689 "Dictyostelium discoideum" [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 dictyBase:DDB_G0282887
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0006888 SUPFAM:SSF64356 OMA:VGHNDNP
PANTHER:PTHR12403 eggNOG:COG5603 HSSP:Q9CQP2 RefSeq:XP_639381.1
ProteinModelPortal:Q54RV6 STRING:Q54RV6 EnsemblProtists:DDB0266387
GeneID:8623820 KEGG:ddi:DDB_G0282887 Uniprot:Q54RV6
Length = 133
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 62/132 (46%), Positives = 94/132 (71%)
Query: 3 TTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKAID 62
+T F+I+ +N+ P+YE E V++++ L Q+I H +LDIV++ W ++ M+LK ID
Sbjct: 2 STFTFLIIGKNDNPLYEIEFPITVQKKETYVL-QYIAHGSLDIVEEHVWKSNNMYLKIID 60
Query: 63 RFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSH 122
+FN + +S +VTAGH +F+LLH+ +++D IK+FF EVH+LY+KILLNP Y ITS+
Sbjct: 61 KFNKVQISSFVTAGHIKFLLLHEKKDEDAIKNFFVEVHDLYLKILLNPFYEYNKPITSTA 120
Query: 123 FDTKVRALARKY 134
FD KVR + KY
Sbjct: 121 FDAKVRKIGTKY 132
>POMBASE|SPBC11G11.04 [details] [associations]
symbol:trs20 "TRAPP complex subunit Trs20 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005801 "cis-Golgi network" evidence=IC] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0030008 "TRAPP complex" evidence=ISO] [GO:0032313
"regulation of Rab GTPase activity" evidence=IC] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
PomBase:SPBC11G11.04 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0006886 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006888
GO:GO:0032313 SUPFAM:SSF64356 GO:GO:0030008 OMA:VGHNDNP
PANTHER:PTHR12403 eggNOG:COG5603 HOGENOM:HOG000214139 HSSP:Q9CQP2
PIR:T39331 RefSeq:NP_595722.1 ProteinModelPortal:Q9USZ5
STRING:Q9USZ5 EnsemblFungi:SPBC11G11.04.1 GeneID:2539833
KEGG:spo:SPBC11G11.04 OrthoDB:EOG479JHG NextBio:20800981
Uniprot:Q9USZ5
Length = 136
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 64/135 (47%), Positives = 94/135 (69%)
Query: 4 TACFIIVSRNEIPIYEAEVGSAVKREDAA---QLHQFILHAALDIVQDLAWTTSAMFLKA 60
TA I+ + P+YE E+G ++ D + L+QFI+H++LDIV L WT++A ++K
Sbjct: 2 TAYAAIIGTKDNPVYELEMGPINEKLDRSLNSHLNQFIVHSSLDIVDQLQWTSNAFYMKT 61
Query: 61 IDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120
ID+F+++ +S YVT + RFMLLH +++ D IK FFQE+HELYIK L++P Y P I S
Sbjct: 62 IDQFHEMYISAYVTPSNMRFMLLHQNQSADNIKLFFQELHELYIKTLMSPFYQPNQPIRS 121
Query: 121 SHFDTKVRALARKYL 135
FD KVR++AR+YL
Sbjct: 122 QAFDLKVRSIARRYL 136
>UNIPROTKB|G5EA75 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9823 "Sus scrofa" [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006722 InterPro:IPR011012
Pfam:PF04628 GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356
OMA:VGHNDNP PANTHER:PTHR12403 GeneTree:ENSGT00510000047168
EMBL:CU633939 Ensembl:ENSSSCT00000013263 Uniprot:G5EA75
Length = 144
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 66/142 (46%), Positives = 96/142 (67%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGHT----RFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYL 113
LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK +NP Y
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHILIYMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYE 120
Query: 114 PGSRITSSHFDTKVRALARKYL 135
P S I SS FD KV+ L +K+L
Sbjct: 121 PNSPIRSSAFDRKVQFLGKKHL 142
>RGD|6499350 [details] [associations]
symbol:LOC100910318 "trafficking protein particle complex
subunit 2-like" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 GO:GO:0006351
GO:GO:0006888 SUPFAM:SSF64356 EMBL:CH473948 OMA:VGHNDNP
PANTHER:PTHR12403 GeneTree:ENSGT00510000047168 OrthoDB:EOG49GKHT
EMBL:AC105470 IPI:IPI00817107 RefSeq:NP_001258040.1
RefSeq:NP_001258041.1 Ensembl:ENSRNOT00000006006 GeneID:100910318
KEGG:rno:100910318 Uniprot:D3ZVF4
Length = 140
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 61/138 (44%), Positives = 94/138 (68%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G +++ L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKTESKDEHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSR 117
LK +D+FN+ VS +VTAGH R ++LHD R +DGIK+FF +V++LYIK +NP Y P S
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRLIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120
Query: 118 ITSSHFDTKVRALARKYL 135
I S+ F+ KV+ L +K+L
Sbjct: 121 IRSTAFERKVQFLGKKHL 138
>UNIPROTKB|G1K394 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 EMBL:AC003037
HGNC:HGNC:23068 ChiTaRS:TRAPPC2 PANTHER:PTHR12403
ProteinModelPortal:G1K394 SMR:G1K394 PRIDE:G1K394
Ensembl:ENST00000453655 ArrayExpress:G1K394 Bgee:G1K394
Uniprot:G1K394
Length = 147
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 66/145 (45%), Positives = 96/145 (66%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGHT-------RFMLLHDSRNDDGIKSFFQEVHELYIKILLNP 110
LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK +NP
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHILTFLVKMRFIMLHDIRQEDGIKNFFTDVYDLYIKFSMNP 120
Query: 111 LYLPGSRITSSHFDTKVRALARKYL 135
Y P S I SS FD KV+ L +K+L
Sbjct: 121 FYEPNSPIRSSAFDRKVQFLGKKHL 145
>ZFIN|ZDB-GENE-060929-1266 [details] [associations]
symbol:trappc2 "trafficking protein particle
complex 2" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 ZFIN:ZDB-GENE-060929-1266
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 PANTHER:PTHR12403 eggNOG:COG5603
GeneTree:ENSGT00510000047168 HOGENOM:HOG000214139
HOVERGEN:HBG006717 OrthoDB:EOG49GKHT EMBL:BC124169 IPI:IPI00806101
RefSeq:NP_001070243.1 UniGene:Dr.16486 ProteinModelPortal:Q08CN0
SMR:Q08CN0 STRING:Q08CN0 Ensembl:ENSDART00000099693 GeneID:767808
KEGG:dre:767808 InParanoid:Q08CN0 NextBio:20918186
ArrayExpress:Q08CN0 Bgee:Q08CN0 Uniprot:Q08CN0
Length = 140
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 60/138 (43%), Positives = 95/138 (68%)
Query: 1 MATTACFIIVSRNEIPIYEAEV---GSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F++V ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVMVGHHDNPVFELEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSR 117
LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LY+K +NP Y +
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFNDVYDLYVKFAMNPFYEVNAP 120
Query: 118 ITSSHFDTKVRALARKYL 135
I S+ F+ KV+ L +K+L
Sbjct: 121 IRSTAFERKVQFLGKKHL 138
>UNIPROTKB|Q5ZKP4 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9031 "Gallus gallus" [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 OMA:VGHNDNP PANTHER:PTHR12403
eggNOG:COG5603 GeneTree:ENSGT00510000047168 HOGENOM:HOG000214139
HOVERGEN:HBG006717 OrthoDB:EOG49GKHT EMBL:AJ720040
EMBL:AADN02011353 IPI:IPI00570779 RefSeq:NP_001006263.1
UniGene:Gga.7014 STRING:Q5ZKP4 Ensembl:ENSGALT00000026761
GeneID:418634 KEGG:gga:418634 InParanoid:Q5ZKP4 NextBio:20821790
Uniprot:Q5ZKP4
Length = 140
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 60/138 (43%), Positives = 91/138 (65%)
Query: 1 MATTACFIIVSRNEIPIYEAEV---GSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSR 117
LK +D+FN+ VS + H RF++LHD R +DGIK+FF +V++LYIK +NP Y S
Sbjct: 61 LKTVDKFNEWFVSAFAFVLHMRFIMLHDVRQEDGIKNFFNDVYDLYIKFAMNPFYELNSP 120
Query: 118 ITSSHFDTKVRALARKYL 135
I SS F+ KV+ L +K+L
Sbjct: 121 IRSSAFERKVQFLGKKHL 138
>FB|FBgn0263604 [details] [associations]
symbol:l(3)72Dh "lethal (3) 72Dh" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IGI] [GO:0033227 "dsRNA transport"
evidence=IMP] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 EMBL:AE014296
GO:GO:0006888 GO:GO:0033227 SUPFAM:SSF64356 GO:GO:0007224
OMA:VGHNDNP PANTHER:PTHR12403 eggNOG:COG5603
GeneTree:ENSGT00510000047168 HSSP:Q9CQP2 EMBL:AY071561
RefSeq:NP_648841.1 UniGene:Dm.18901 ProteinModelPortal:Q9VUZ1
IntAct:Q9VUZ1 MINT:MINT-822446 STRING:Q9VUZ1 PaxDb:Q9VUZ1
EnsemblMetazoa:FBtr0075491 GeneID:39769 KEGG:dme:Dmel_CG5161
UCSC:CG5161-RA FlyBase:FBgn0036573 InParanoid:Q9VUZ1
OrthoDB:EOG43BK56 PhylomeDB:Q9VUZ1 GenomeRNAi:39769 NextBio:815287
Bgee:Q9VUZ1 Uniprot:Q9VUZ1
Length = 139
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 62/136 (45%), Positives = 88/136 (64%)
Query: 3 TTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLK 59
+T F+IV +N+ PIYE E V +++ED L QFI HAALD+V + W T+ M LK
Sbjct: 2 STYYFVIVGQNDNPIYEKEFSTVNKELRKEDHRHLTQFIAHAALDLVDEHKWKTANMQLK 61
Query: 60 AIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRIT 119
+IDRFN VS ++TA RF+++HD++ND+GIK+FF E+++ YIK +N Y + I
Sbjct: 62 SIDRFNQWFVSAFITASQIRFIIVHDNKNDEGIKNFFNEMYDTYIKNSMNAFYRINTPIK 121
Query: 120 SSHFDTKVRALARKYL 135
S F+ K RKYL
Sbjct: 122 SPMFEKKSEIFGRKYL 137
>UNIPROTKB|F5H785 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 EMBL:AC003037
HGNC:HGNC:23068 ChiTaRS:TRAPPC2 PANTHER:PTHR12403 IPI:IPI00979652
ProteinModelPortal:F5H785 SMR:F5H785 Ensembl:ENST00000519885
ArrayExpress:F5H785 Bgee:F5H785 Uniprot:F5H785
Length = 113
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 51/109 (46%), Positives = 78/109 (71%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKI 106
LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK+
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKV 109
>WB|WBGene00021046 [details] [associations]
symbol:sedl-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] InterPro:IPR006722 InterPro:IPR011012
Pfam:PF04628 GO:GO:0005783 GO:GO:0005794 GO:GO:0048471
GO:GO:0006888 SUPFAM:SSF64356 OMA:VGHNDNP PANTHER:PTHR12403
eggNOG:COG5603 GeneTree:ENSGT00510000047168 HOGENOM:HOG000214139
EMBL:FO080991 PIR:T29507 RefSeq:NP_508272.1 HSSP:Q9CQP2
ProteinModelPortal:O02173 SMR:O02173 IntAct:O02173 STRING:O02173
PaxDb:O02173 EnsemblMetazoa:W05H7.3 GeneID:180478
KEGG:cel:CELE_W05H7.3 UCSC:W05H7.3 CTD:180478 WormBase:W05H7.3
InParanoid:O02173 NextBio:909558 Uniprot:O02173
Length = 141
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 63/140 (45%), Positives = 82/140 (58%)
Query: 1 MATTAC-FIIVSRNEIPIYEAE--VGSAVKREDAAQLH--QFILHAALDIVQDLAWTTSA 55
MAT F I+ + PI+E + VG +E H +I HAALDIV + A TTS
Sbjct: 1 MATKEFYFAIIGHCDQPIFEMDFPVGEKKTKESEGTRHLNHYIGHAALDIVDEHALTTSQ 60
Query: 56 MFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPG 115
M+LK +D+FN+ VS +VTA RF++LH R D+GIK FFQE++E YIK +NP Y
Sbjct: 61 MYLKMVDKFNEWYVSAFVTASRIRFIMLHTHRADEGIKQFFQEMYETYIKHAMNPFYEID 120
Query: 116 SRITSSHFDTKVRALARKYL 135
I S F+ K RKYL
Sbjct: 121 DVIESPAFEQKATLYGRKYL 140
>UNIPROTKB|O02173 [details] [associations]
symbol:sedl-1 "Probable trafficking protein particle
complex subunit 2" species:6239 "Caenorhabditis elegans"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005794
GO:GO:0048471 GO:GO:0006888 SUPFAM:SSF64356 OMA:VGHNDNP
PANTHER:PTHR12403 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 EMBL:FO080991 PIR:T29507 RefSeq:NP_508272.1
HSSP:Q9CQP2 ProteinModelPortal:O02173 SMR:O02173 IntAct:O02173
STRING:O02173 PaxDb:O02173 EnsemblMetazoa:W05H7.3 GeneID:180478
KEGG:cel:CELE_W05H7.3 UCSC:W05H7.3 CTD:180478 WormBase:W05H7.3
InParanoid:O02173 NextBio:909558 Uniprot:O02173
Length = 141
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 63/140 (45%), Positives = 82/140 (58%)
Query: 1 MATTAC-FIIVSRNEIPIYEAE--VGSAVKREDAAQLH--QFILHAALDIVQDLAWTTSA 55
MAT F I+ + PI+E + VG +E H +I HAALDIV + A TTS
Sbjct: 1 MATKEFYFAIIGHCDQPIFEMDFPVGEKKTKESEGTRHLNHYIGHAALDIVDEHALTTSQ 60
Query: 56 MFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPG 115
M+LK +D+FN+ VS +VTA RF++LH R D+GIK FFQE++E YIK +NP Y
Sbjct: 61 MYLKMVDKFNEWYVSAFVTASRIRFIMLHTHRADEGIKQFFQEMYETYIKHAMNPFYEID 120
Query: 116 SRITSSHFDTKVRALARKYL 135
I S F+ K RKYL
Sbjct: 121 DVIESPAFEQKATLYGRKYL 140
>SGD|S000000458 [details] [associations]
symbol:TRS20 "Subunit of the transport protein particle
(TRAPP) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0000407
"pre-autophagosomal structure" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA;IGI;IMP] [GO:0030008
"TRAPP complex" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016192 "vesicle-mediated transport" evidence=IEA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 SGD:S000000458
GO:GO:0005783 GO:GO:0006914 EMBL:BK006936 GO:GO:0006888 EMBL:X70529
SUPFAM:SSF64356 GO:GO:0000407 GO:GO:0030008 OMA:VGHNDNP
PANTHER:PTHR12403 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 OrthoDB:EOG479JHG EMBL:Z36123 PIR:S32957
RefSeq:NP_009813.1 ProteinModelPortal:P38334 SMR:P38334
DIP:DIP-1711N IntAct:P38334 MINT:MINT-407365 STRING:P38334
PaxDb:P38334 EnsemblFungi:YBR254C GeneID:852556 KEGG:sce:YBR254C
CYGD:YBR254c NextBio:971655 Genevestigator:P38334
GermOnline:YBR254C Uniprot:P38334
Length = 175
Score = 172 (65.6 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 36/90 (40%), Positives = 56/90 (62%)
Query: 53 TSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLH-DSRN------DDGIKSFFQEVHELYIK 105
T +L +D F L ++ Y++ +F+++H +S N D+ ++SF+QEVHELY+K
Sbjct: 84 TDNCYLGKVDHFYGLAITAYISYSGMKFVMIHGNSANSSVVIDDNNMRSFYQEVHELYVK 143
Query: 106 ILLNPLYLPGSRITSSHFDTKVRALARKYL 135
L+NP Y I S FD++VR LARK+L
Sbjct: 144 TLMNPFYKITDPIRSPAFDSRVRTLARKHL 173
Score = 101 (40.6 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 7 FIIVSRNEIPIYEAEVGSAVKRE----DAAQLHQFILHAALDIVQDLAW 51
F I+ + + P+YE E +A + D +L+ FILHA+LDIV+DL W
Sbjct: 5 FAIIGKKDNPVYEIEFTNAENPQGFPQDLKELNPFILHASLDIVEDLQW 53
>CGD|CAL0004070 [details] [associations]
symbol:orf19.3314 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0030008
"TRAPP complex" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 CGD:CAL0004070 GO:GO:0005622
GO:GO:0006888 EMBL:AACQ01000045 EMBL:AACQ01000042 SUPFAM:SSF64356
PANTHER:PTHR12403 eggNOG:COG5603 HOGENOM:HOG000214139
RefSeq:XP_718137.1 RefSeq:XP_718406.1 ProteinModelPortal:Q5A920
STRING:Q5A920 GeneID:3639907 GeneID:3640214 KEGG:cal:CaO19.10824
KEGG:cal:CaO19.3314 Uniprot:Q5A920
Length = 150
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 45/107 (42%), Positives = 68/107 (63%)
Query: 29 EDAAQLHQFILHAALDIVQDLAWTTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRN 88
+ +L FI +++LD++ D A+TT+ + L ID+F L ++ YV +F+L ++S+
Sbjct: 44 QSTKELLPFIANSSLDLIDDQAFTTNVLNLGKIDQFYGLSINAYVLQSQVKFILCYNSKE 103
Query: 89 DDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDTKVRALARKYL 135
+ IK FFQEV+ELY K L+NP Y I S FD K++ LARKYL
Sbjct: 104 ESTIKQFFQEVNELYTKCLMNPFYNVDDAIVSPDFDLKIKQLARKYL 150
>UNIPROTKB|Q5A920 [details] [associations]
symbol:TRS20 "Putative uncharacterized protein TRS20"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 CGD:CAL0004070 GO:GO:0005622
GO:GO:0006888 EMBL:AACQ01000045 EMBL:AACQ01000042 SUPFAM:SSF64356
PANTHER:PTHR12403 eggNOG:COG5603 HOGENOM:HOG000214139
RefSeq:XP_718137.1 RefSeq:XP_718406.1 ProteinModelPortal:Q5A920
STRING:Q5A920 GeneID:3639907 GeneID:3640214 KEGG:cal:CaO19.10824
KEGG:cal:CaO19.3314 Uniprot:Q5A920
Length = 150
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 45/107 (42%), Positives = 68/107 (63%)
Query: 29 EDAAQLHQFILHAALDIVQDLAWTTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRN 88
+ +L FI +++LD++ D A+TT+ + L ID+F L ++ YV +F+L ++S+
Sbjct: 44 QSTKELLPFIANSSLDLIDDQAFTTNVLNLGKIDQFYGLSINAYVLQSQVKFILCYNSKE 103
Query: 89 DDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDTKVRALARKYL 135
+ IK FFQEV+ELY K L+NP Y I S FD K++ LARKYL
Sbjct: 104 ESTIKQFFQEVNELYTKCLMNPFYNVDDAIVSPDFDLKIKQLARKYL 150
>ASPGD|ASPL0000007051 [details] [associations]
symbol:AN11500 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030008 "TRAPP complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005622 EMBL:BN001301
GO:GO:0006888 SUPFAM:SSF64356 PANTHER:PTHR12403
HOGENOM:HOG000214139 EnsemblFungi:CADANIAT00006889 OMA:MYLKHID
Uniprot:C8V2D4
Length = 207
Score = 121 (47.7 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 31/92 (33%), Positives = 52/92 (56%)
Query: 7 FIIVSRNEIPIYEAEVGSA------VKR---EDAAQ---LHQFILHAALDIVQDLAWTTS 54
F I+S ++P++ G++ + R DAAQ + QFI+H++LD++++ W
Sbjct: 5 FTILSPTDVPLFNIAFGTSKSGGDGIARFRFPDAAQNTYMTQFIIHSSLDMLEEAQWMGG 64
Query: 55 AMFLKAIDRFN--DLVVSVYVTAGHTRFMLLH 84
M+LK ID + VS ++T TRF+LLH
Sbjct: 65 NMYLKHIDTYPPASAYVSAFLTPSGTRFLLLH 96
Score = 98 (39.6 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 87 RNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDTKVRALARKYL 135
+ ++ ++ F EV+E Y+K +++P Y G I S F +KV A RK+L
Sbjct: 159 QTEEAVRQFMTEVYEAYVKTVMSPFYRRGMEIRSPVFRSKVSAAGRKWL 207
>UNIPROTKB|E1BYR2 [details] [associations]
symbol:TRAPPC2L "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005737
GO:GO:0006888 SUPFAM:SSF64356 PANTHER:PTHR12403 CTD:51693
OMA:CNPFYIP GeneTree:ENSGT00510000047505 EMBL:AADN02054103
IPI:IPI00575042 RefSeq:XP_414207.1 Ensembl:ENSGALT00000010103
GeneID:415847 KEGG:gga:415847 NextBio:20819390 Uniprot:E1BYR2
Length = 139
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 41/136 (30%), Positives = 70/136 (51%)
Query: 6 CFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQD-LAWTTSAM------FL 58
C ++++ P+Y + S V E+ + H + +H +LD+V + ++ AM +L
Sbjct: 4 CIAVIAKENYPLY---IRS-VPTENELKFH-YTVHTSLDVVDEKISAMGKAMVDQRELYL 58
Query: 59 KAIDRFNDLVVSVYVTAGHTRFMLLHDSRN----DDGIKSFFQEVHELYIKILLNPLYLP 114
+ D V YVT +F+++ DS N D+ I+S F+++H Y I+ NP Y P
Sbjct: 59 GLLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDIMCNPFYNP 118
Query: 115 GSRITSSHFDTKVRAL 130
G RI S FD V ++
Sbjct: 119 GDRIHSRAFDNMVNSM 134
>UNIPROTKB|E5RFG0 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 EMBL:AC003037
HGNC:HGNC:23068 ChiTaRS:TRAPPC2 PANTHER:PTHR12403 IPI:IPI00641353
ProteinModelPortal:E5RFG0 SMR:E5RFG0 Ensembl:ENST00000518847
ArrayExpress:E5RFG0 Bgee:E5RFG0 Uniprot:E5RFG0
Length = 74
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVS 70
LK +D+FN+ VS
Sbjct: 61 LKTVDKFNEWFVS 73
>UNIPROTKB|F1S6M0 [details] [associations]
symbol:TRAPPC2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005737 GO:GO:0006888
SUPFAM:SSF64356 PANTHER:PTHR12403 OMA:CNPFYIP
GeneTree:ENSGT00510000047505 EMBL:FP102571
Ensembl:ENSSSCT00000002936 Uniprot:F1S6M0
Length = 141
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 43/141 (30%), Positives = 72/141 (51%)
Query: 6 CFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKAIDR-- 63
C ++++ P+Y + S V E+ Q H ++LH +LD+V + SAM +D+
Sbjct: 4 CVAVIAKENYPLY---IRS-VPTENELQFH-YMLHTSLDVVDE---KISAMGKALVDQRE 55
Query: 64 -FNDLVVSV---------YVTAGHTRFMLLHDSRN----DDGIKSFFQEVHELYIKILLN 109
+ L+ YVT +F+++ DS N D+ I+S F+++H Y ++ N
Sbjct: 56 LYLGLLYPTEDYKRCSYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHSSYTDVMCN 115
Query: 110 PLYLPGSRITSSHFDTKVRAL 130
P Y PG RI S FD+ V A+
Sbjct: 116 PFYTPGDRIQSRAFDSMVTAM 136
>RGD|1304906 [details] [associations]
symbol:Trappc2l "trafficking protein particle complex 2-like"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 RGD:1304906 GO:GO:0005783
GO:GO:0005794 GO:GO:0048471 GO:GO:0006888 EMBL:CH473972
SUPFAM:SSF64356 PANTHER:PTHR12403 CTD:51693 eggNOG:NOG238004
HOGENOM:HOG000230646 OrthoDB:EOG4N8R62 OMA:CNPFYIP
GeneTree:ENSGT00510000047505 EMBL:BC166907 EMBL:BC166917
EMBL:BC168734 IPI:IPI00363736 RefSeq:NP_001099663.1
UniGene:Rn.24899 ProteinModelPortal:B2RYU6 STRING:B2RYU6
Ensembl:ENSRNOT00000019740 GeneID:292074 KEGG:rno:292074
UCSC:RGD:1304906 NextBio:633712 Genevestigator:B2RYU6
Uniprot:B2RYU6
Length = 139
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 39/136 (28%), Positives = 71/136 (52%)
Query: 6 CFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQD-LAWTTSAM------FL 58
C ++++ P+Y + S E+ + H +++H +LD+V + ++ A+ +L
Sbjct: 4 CIAVIAKENYPLY---IRST-PTENELKFH-YMVHTSLDVVDEKISAMGKALVDQRELYL 58
Query: 59 KAIDRFNDLVVSVYVTAGHTRFMLLHDSRN----DDGIKSFFQEVHELYIKILLNPLYLP 114
+ D V YVT +F+++ DS N D+ I+S F+++H Y ++ NP Y P
Sbjct: 59 GLLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNP 118
Query: 115 GSRITSSHFDTKVRAL 130
G RI S FDT V ++
Sbjct: 119 GDRIQSRAFDTMVTSM 134
>MGI|MGI:1916295 [details] [associations]
symbol:Trappc2l "trafficking protein particle complex
2-like" species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 MGI:MGI:1916295 GO:GO:0005783
GO:GO:0005794 GO:GO:0048471 GO:GO:0006888 SUPFAM:SSF64356
PANTHER:PTHR12403 CTD:51693 eggNOG:NOG238004 HOGENOM:HOG000230646
HOVERGEN:HBG056603 OrthoDB:EOG4N8R62 OMA:CNPFYIP EMBL:AB030200
EMBL:AK007526 EMBL:BC028502 EMBL:BC114968 IPI:IPI00125570
RefSeq:NP_067477.1 UniGene:Mm.38746 ProteinModelPortal:Q9JME7
SMR:Q9JME7 IntAct:Q9JME7 STRING:Q9JME7 PhosphoSite:Q9JME7
PaxDb:Q9JME7 PRIDE:Q9JME7 DNASU:59005 Ensembl:ENSMUST00000015157
GeneID:59005 KEGG:mmu:59005 UCSC:uc009ntj.2
GeneTree:ENSGT00510000047505 InParanoid:Q9JME7 NextBio:314530
Bgee:Q9JME7 CleanEx:MM_TRAPPC2L Genevestigator:Q9JME7
Uniprot:Q9JME7
Length = 139
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 39/136 (28%), Positives = 70/136 (51%)
Query: 6 CFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQD-LAWTTSAM------FL 58
C ++++ P+Y + S E + H +++H +LD+V + ++ A+ +L
Sbjct: 4 CIAVIAKENYPLY---IRST-PTESELKFH-YMVHTSLDVVDEKISAMGKALVDQRELYL 58
Query: 59 KAIDRFNDLVVSVYVTAGHTRFMLLHDSRN----DDGIKSFFQEVHELYIKILLNPLYLP 114
+ D V YVT +F+++ DS N D+ I+S F+++H Y ++ NP Y P
Sbjct: 59 GLLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNP 118
Query: 115 GSRITSSHFDTKVRAL 130
G RI S FDT V ++
Sbjct: 119 GDRIQSRAFDTMVTSM 134
>DICTYBASE|DDB_G0292690 [details] [associations]
symbol:trappc2l "trafficking protein particle complex
subunit 2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
dictyBase:DDB_G0292690 GenomeReviews:CM000155_GR EMBL:AAFI02000194
GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 PANTHER:PTHR12403
eggNOG:NOG238004 RefSeq:XP_629573.1 ProteinModelPortal:Q54CU7
PRIDE:Q54CU7 EnsemblProtists:DDB0266384 GeneID:8628834
KEGG:ddi:DDB_G0292690 OMA:CNPFYIP ProtClustDB:CLSZ2728724
Uniprot:Q54CU7
Length = 140
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 39/137 (28%), Positives = 69/137 (50%)
Query: 1 MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTT----SAM 56
M C IV + P++ + S++ E+ +LH +I+H +LDI++D + S M
Sbjct: 1 MKKIVCVAIVGKGNNPLFIQDFSSSITDENKLKLH-YIVHCSLDIIEDKPGSNKKLPSDM 59
Query: 57 FLKAIDRFNDLVVSVYVTAGHTRFMLLH-DSRN--DDGIKSFFQEVHELYIKILLNPLYL 113
+L + D V Y+T +F+++ D+ + D +K FF+ + L+I NP Y
Sbjct: 60 YLGLLYPTEDYKVYGYLTNTKIKFIIVVLDTSDIKDSDLKLFFKRLQTLFINTTSNPFYK 119
Query: 114 PGSRITSSHFDTKVRAL 130
P S++ S F +V L
Sbjct: 120 PNSKVESKKFLQEVTNL 136
>UNIPROTKB|A6H7F7 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9913 "Bos taurus" [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 GO:GO:0006888
SUPFAM:SSF64356 PANTHER:PTHR12403 EMBL:BC146228 IPI:IPI00854544
RefSeq:NP_001092390.1 UniGene:Bt.2967 ProteinModelPortal:A6H7F7
STRING:A6H7F7 GeneID:509955 KEGG:bta:509955 CTD:51693
eggNOG:NOG238004 HOGENOM:HOG000230646 HOVERGEN:HBG056603
InParanoid:A6H7F7 OrthoDB:EOG4N8R62 NextBio:20869211 Uniprot:A6H7F7
Length = 139
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 38/136 (27%), Positives = 71/136 (52%)
Query: 6 CFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQD-LAWTTSAM------FL 58
C ++++ P+Y + S + E+ + H +++H +LD+V + ++ A+ +L
Sbjct: 4 CVAVIAKENYPLY---IRS-IPTENELKFH-YMVHTSLDVVDEKISAMGKALVDQRELYL 58
Query: 59 KAIDRFNDLVVSVYVTAGHTRFMLLHDSRN----DDGIKSFFQEVHELYIKILLNPLYLP 114
+ D V YVT +F+++ DS N D+ I+S F+++H Y ++ NP Y P
Sbjct: 59 GLLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNP 118
Query: 115 GSRITSSHFDTKVRAL 130
G RI S FD V ++
Sbjct: 119 GDRIQSRAFDGMVTSM 134
>UNIPROTKB|Q9UL33 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9606 "Homo sapiens" [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783
GO:GO:0005794 GO:GO:0005737 GO:GO:0048471 GO:GO:0006888
SUPFAM:SSF64356 EMBL:AC092384 PANTHER:PTHR12403 CTD:51693
eggNOG:NOG238004 HOGENOM:HOG000230646 HOVERGEN:HBG056603
OrthoDB:EOG4N8R62 OMA:CNPFYIP EMBL:AF089106 EMBL:AF161524
EMBL:AK126779 EMBL:AK311885 EMBL:BC011369 EMBL:BC018024
EMBL:BC105809 IPI:IPI00007819 IPI:IPI00644084 RefSeq:NP_057293.1
UniGene:Hs.461722 ProteinModelPortal:Q9UL33 SMR:Q9UL33
IntAct:Q9UL33 STRING:Q9UL33 PhosphoSite:Q9UL33 DMDM:74721024
PaxDb:Q9UL33 PRIDE:Q9UL33 Ensembl:ENST00000301021 GeneID:51693
KEGG:hsa:51693 UCSC:uc002fmc.3 UCSC:uc002fmd.3
GeneCards:GC16P088923 H-InvDB:HIX0019527 HGNC:HGNC:30887
HPA:HPA041714 MIM:610970 neXtProt:NX_Q9UL33 PharmGKB:PA145147879
InParanoid:Q9UL33 PhylomeDB:Q9UL33 GenomeRNAi:51693 NextBio:55706
Bgee:Q9UL33 CleanEx:HS_TRAPPC2L Genevestigator:Q9UL33
Uniprot:Q9UL33
Length = 140
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 39/137 (28%), Positives = 71/137 (51%)
Query: 6 CFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQD-LAWTTSAM------FL 58
C ++++ P+Y + S E+ + H +++H +LD+V + ++ A+ +L
Sbjct: 4 CIAVIAKENYPLY---IRST-PTENELKFH-YMVHTSLDVVDEKISAMGKALVDQRELYL 58
Query: 59 KAIDRFNDLVVSVYVTAGHTRFMLLHDSRN----DDGIKSFFQEVHELYIKILLNPLYLP 114
+ D V YVT +F+++ DS N D+ I+S F+++H Y ++ NP Y P
Sbjct: 59 GLLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNP 118
Query: 115 GSRITSSH-FDTKVRAL 130
G RI SS FD V ++
Sbjct: 119 GDRIQSSRAFDNMVTSM 135
>UNIPROTKB|E2RB28 [details] [associations]
symbol:TRAPPC2L "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005737
GO:GO:0006888 SUPFAM:SSF64356 PANTHER:PTHR12403 OMA:CNPFYIP
GeneTree:ENSGT00510000047505 EMBL:AAEX03003965
Ensembl:ENSCAFT00000037607 Uniprot:E2RB28
Length = 140
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 37/137 (27%), Positives = 72/137 (52%)
Query: 6 CFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQD-LAWTTSAM------FL 58
C ++++ P+Y + S + E+ + H +++H +LD+V + ++ A+ +L
Sbjct: 4 CVAVIAKENYPLY---IRS-IPTENELKFH-YMVHTSLDVVDEKISAMGKALVDQRELYL 58
Query: 59 KAIDRFNDLVVSV-YVTAGHTRFMLLHDSRN----DDGIKSFFQEVHELYIKILLNPLYL 113
+ D + YVT +F+++ DS N D+ I+S F+++H Y ++ NP Y
Sbjct: 59 GLLYPTEDYKIKYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYN 118
Query: 114 PGSRITSSHFDTKVRAL 130
PG RI S FD+ V ++
Sbjct: 119 PGDRIHSRAFDSMVTSM 135
>TAIR|locus:2051457 [details] [associations]
symbol:AT2G20930 "AT2G20930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 EMBL:CP002685 GO:GO:0005622
GO:GO:0006888 SUPFAM:SSF64356 EMBL:AC006234 PANTHER:PTHR12403
OMA:CNPFYIP EMBL:BT025606 EMBL:AK317476 IPI:IPI00519884 PIR:A84595
RefSeq:NP_565493.1 UniGene:At.39634 ProteinModelPortal:Q9SKS7
SMR:Q9SKS7 STRING:Q9SKS7 PRIDE:Q9SKS7 EnsemblPlants:AT2G20930.1
GeneID:816627 KEGG:ath:AT2G20930 TAIR:At2g20930 InParanoid:Q9SKS7
PhylomeDB:Q9SKS7 ProtClustDB:CLSN2688290 ArrayExpress:Q9SKS7
Genevestigator:Q9SKS7 Uniprot:Q9SKS7
Length = 140
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 39/139 (28%), Positives = 68/139 (48%)
Query: 6 CFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLA-------WTTSAMFL 58
C +V P+Y + S +DA +LH I+H +LD++++ T + FL
Sbjct: 4 CVAVVGHQNNPLY---IQSFTDADDALKLHH-IVHCSLDVIEERVNNPKKSGTTLNEAFL 59
Query: 59 KAIDRFNDLVVSVYVTAGHTRFMLLH---DSRNDDGIKSFFQEVHELYIKILLNPLYLPG 115
+ + V Y+T +F+L+ D R+ D ++SFF++ H Y+ + NP ++PG
Sbjct: 60 GLLYPTVNYKVYGYLTNTKVKFILVTTDLDVRDTD-VRSFFRKFHAAYVDAVSNPFHVPG 118
Query: 116 SRITSSHFDTKVRALARKY 134
+ITS F V + Y
Sbjct: 119 KKITSRTFAQTVSNIVGSY 137
>FB|FBgn0033605 [details] [associations]
symbol:CG9067 species:7227 "Drosophila melanogaster"
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 EMBL:AE013599 GO:GO:0005622
GO:GO:0006888 SUPFAM:SSF64356 PANTHER:PTHR12403 eggNOG:NOG238004
OMA:CNPFYIP GeneTree:ENSGT00510000047505 RefSeq:NP_610662.1
UniGene:Dm.16172 ProteinModelPortal:A1Z8I0 SMR:A1Z8I0 STRING:A1Z8I0
PRIDE:A1Z8I0 EnsemblMetazoa:FBtr0088182 GeneID:36197
KEGG:dme:Dmel_CG9067 UCSC:CG9067-RA FlyBase:FBgn0033605
InParanoid:A1Z8I0 OrthoDB:EOG4J6Q79 PhylomeDB:A1Z8I0
GenomeRNAi:36197 NextBio:797298 Bgee:A1Z8I0 Uniprot:A1Z8I0
Length = 138
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 35/135 (25%), Positives = 70/135 (51%)
Query: 6 CFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDL------AWTTSAMFLK 59
C ++ ++ P+Y S +++E Q H ++AALD+V++ A + ++L
Sbjct: 4 CIAVIGKDNAPLYLTT--SDMEQELELQYH---VNAALDVVEEKCLIGKGAPESKELYLG 58
Query: 60 AIDRFNDLVVSVYVTAGHTRFMLLHDSRN----DDGIKSFFQEVHELYIKILLNPLYLPG 115
+ + + +VT +F+++ DS N ++ +++ F+ +H LY + NP Y+PG
Sbjct: 59 LLYSTENHKIYGFVTNTRVKFIVVIDSSNVALRENEVRAIFRNLHLLYTDAICNPFYIPG 118
Query: 116 SRITSSHFDTKVRAL 130
+TS FD V+ L
Sbjct: 119 ESLTSKKFDRAVQKL 133
>UNIPROTKB|F1MIB4 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9913 "Bos taurus" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] InterPro:IPR006722 InterPro:IPR011012
Pfam:PF04628 GO:GO:0005737 GO:GO:0006888 SUPFAM:SSF64356
PANTHER:PTHR12403 IPI:IPI00854544 OMA:CNPFYIP
GeneTree:ENSGT00510000047505 EMBL:DAAA02046256
Ensembl:ENSBTAT00000025533 Uniprot:F1MIB4
Length = 139
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 39/134 (29%), Positives = 69/134 (51%)
Query: 8 IIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQD-LAWTTSAM------FLKA 60
II+ P+Y + S + E+ + H +++H +LD+V + ++ A+ +L
Sbjct: 6 IILFLQNYPLY---IRS-IPTENELKFH-YMVHTSLDVVDEKISAMGKALVDQRELYLGL 60
Query: 61 IDRFNDLVVSVYVTAGHTRFMLLHDSRN----DDGIKSFFQEVHELYIKILLNPLYLPGS 116
+ D V YVT +F+++ DS N D+ I+S F+++H Y ++ NP Y PG
Sbjct: 61 LYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGD 120
Query: 117 RITSSHFDTKVRAL 130
RI S FD V ++
Sbjct: 121 RIQSRAFDGMVTSM 134
>UNIPROTKB|H3BP13 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9606 "Homo sapiens" [GO:0005622
"intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005622 GO:GO:0006888
SUPFAM:SSF64356 EMBL:AC092384 PANTHER:PTHR12403 HGNC:HGNC:30887
ProteinModelPortal:H3BP13 SMR:H3BP13 PRIDE:H3BP13
Ensembl:ENST00000565504 Bgee:H3BP13 Uniprot:H3BP13
Length = 241
Score = 129 (50.5 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 35/126 (27%), Positives = 65/126 (51%)
Query: 6 CFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQD-LAWTTSAM------FL 58
C ++++ P+Y + S E+ + H +++H +LD+V + ++ A+ +L
Sbjct: 4 CIAVIAKENYPLY---IRST-PTENELKFH-YMVHTSLDVVDEKISAMGKALVDQRELYL 58
Query: 59 KAIDRFNDLVVSVYVTAGHTRFMLLHDSRN----DDGIKSFFQEVHELYIKILLNPLYLP 114
+ D V YVT +F+++ DS N D+ I+S F+++H Y ++ NP Y P
Sbjct: 59 GLLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNP 118
Query: 115 GSRITS 120
G RI S
Sbjct: 119 GDRIQS 124
>UNIPROTKB|H3BUK6 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9606 "Homo sapiens" [GO:0005622
"intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005622 GO:GO:0006888
SUPFAM:SSF64356 EMBL:AC092384 PANTHER:PTHR12403 HGNC:HGNC:30887
ProteinModelPortal:H3BUK6 SMR:H3BUK6 Ensembl:ENST00000567895
Bgee:H3BUK6 Uniprot:H3BUK6
Length = 109
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 32/104 (30%), Positives = 55/104 (52%)
Query: 38 ILHAALDIVQD-LAWTTSAM------FLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRN-- 88
++H +LD+V + ++ A+ +L + D V YVT +F+++ DS N
Sbjct: 1 MVHTSLDVVDEKISAMGKALVDQRELYLGLLYPTEDYKVYGYVTNSKVKFVMVVDSSNTA 60
Query: 89 --DDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDTKVRAL 130
D+ I+S F+++H Y ++ NP Y PG RI S FD V ++
Sbjct: 61 LRDNEIRSMFRKLHNSYTDVMCNPFYNPGDRIQSRAFDNMVTSM 104
>UNIPROTKB|H3BQQ8 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9606 "Homo sapiens" [GO:0005622
"intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005622 GO:GO:0006888
SUPFAM:SSF64356 EMBL:AC092384 PANTHER:PTHR12403 HGNC:HGNC:30887
ProteinModelPortal:H3BQQ8 SMR:H3BQQ8 Ensembl:ENST00000561840
Bgee:H3BQQ8 Uniprot:H3BQQ8
Length = 129
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 65 NDLVVSVYVTAGHTRFMLLHDSRN----DDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120
N L YVT +F+++ DS N D+ I+S F+++H Y ++ NP Y PG RI S
Sbjct: 55 NQLCRYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGDRIQS 114
Query: 121 SHFDTKVRAL 130
FD V ++
Sbjct: 115 RAFDNMVTSM 124
>UNIPROTKB|H3BPS1 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9606 "Homo sapiens" [GO:0005622
"intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005622 GO:GO:0006888
SUPFAM:SSF64356 EMBL:AC092384 PANTHER:PTHR12403 HGNC:HGNC:30887
ProteinModelPortal:H3BPS1 SMR:H3BPS1 Ensembl:ENST00000564365
Bgee:H3BPS1 Uniprot:H3BPS1
Length = 59
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 89 DDGIKSFFQEVHELYIKILLNPLYLPGSRITSSH-FDTKVRAL 130
D+ I+S F+++H Y ++ NP Y PG RI SS FD V ++
Sbjct: 12 DNEIRSMFRKLHNSYTDVMCNPFYNPGDRIQSSRAFDNMVTSM 54
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.137 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 135 135 0.00091 102 3 11 22 0.47 30
30 0.44 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 38
No. of states in DFA: 579 (62 KB)
Total size of DFA: 124 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.35u 0.12s 13.47t Elapsed: 00:00:00
Total cpu time: 13.35u 0.12s 13.47t Elapsed: 00:00:00
Start: Mon May 20 20:03:18 2013 End: Mon May 20 20:03:18 2013