Query 032721
Match_columns 135
No_of_seqs 207 out of 1306
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 07:50:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032721.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032721hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 99.9 2E-28 6.8E-33 186.2 7.6 130 2-134 115-254 (353)
2 3p9c_A Caffeic acid O-methyltr 99.9 1.5E-27 5E-32 182.1 11.4 131 2-134 139-269 (364)
3 3reo_A (ISO)eugenol O-methyltr 99.9 3.3E-27 1.1E-31 180.3 11.6 131 2-134 141-271 (368)
4 3lst_A CALO1 methyltransferase 99.9 6.6E-25 2.2E-29 166.2 10.4 130 2-134 123-257 (348)
5 1zg3_A Isoflavanone 4'-O-methy 99.9 1.2E-24 3.9E-29 165.3 9.8 129 2-134 127-261 (358)
6 1fp2_A Isoflavone O-methyltran 99.9 1.3E-24 4.6E-29 164.6 10.0 129 2-134 125-256 (352)
7 3i53_A O-methyltransferase; CO 99.9 6.5E-25 2.2E-29 165.0 8.1 130 2-134 108-245 (332)
8 1fp1_D Isoliquiritigenin 2'-O- 99.9 1.5E-24 5.2E-29 165.5 10.3 131 2-134 146-277 (372)
9 3gwz_A MMCR; methyltransferase 99.9 1.2E-24 4.2E-29 166.0 7.3 130 2-134 141-278 (369)
10 2ip2_A Probable phenazine-spec 99.9 2.6E-23 8.9E-28 156.1 7.7 127 3-134 109-243 (334)
11 1tw3_A COMT, carminomycin 4-O- 99.9 6.4E-22 2.2E-26 149.9 9.5 130 2-134 122-259 (360)
12 1qzz_A RDMB, aclacinomycin-10- 99.9 5.6E-22 1.9E-26 150.8 9.0 130 2-134 121-258 (374)
13 3dp7_A SAM-dependent methyltra 99.9 6.8E-22 2.3E-26 150.5 8.1 127 2-134 115-258 (363)
14 1x19_A CRTF-related protein; m 99.8 3E-20 1E-24 140.9 9.8 120 2-134 135-266 (359)
15 3mcz_A O-methyltransferase; ad 99.8 2E-19 7E-24 135.7 9.1 125 1-134 122-258 (352)
16 2r3s_A Uncharacterized protein 99.8 3.4E-19 1.1E-23 133.4 8.2 124 2-134 108-242 (335)
17 4gek_A TRNA (CMO5U34)-methyltr 99.2 2.9E-11 9.8E-16 88.3 6.2 77 55-134 62-149 (261)
18 1ve3_A Hypothetical protein PH 99.1 3.3E-11 1.1E-15 84.8 3.9 75 53-133 29-112 (227)
19 3dtn_A Putative methyltransfer 99.1 1.9E-10 6.4E-15 81.6 7.6 80 54-134 33-119 (234)
20 3ege_A Putative methyltransfer 99.1 5.1E-10 1.7E-14 81.0 8.8 78 53-134 23-104 (261)
21 3ou2_A SAM-dependent methyltra 99.0 5.9E-10 2E-14 77.8 7.8 78 54-134 35-117 (218)
22 3e05_A Precorrin-6Y C5,15-meth 99.0 6.3E-10 2.1E-14 77.5 7.7 78 54-133 30-117 (204)
23 2p35_A Trans-aconitate 2-methy 99.0 4.6E-10 1.6E-14 80.5 7.1 79 54-134 23-105 (259)
24 3uwp_A Histone-lysine N-methyl 99.0 3E-10 1E-14 87.8 6.0 81 53-135 162-263 (438)
25 4hg2_A Methyltransferase type 99.0 8.1E-10 2.8E-14 80.4 7.6 66 66-134 40-109 (257)
26 1vl5_A Unknown conserved prote 99.0 4E-10 1.4E-14 81.2 5.9 86 45-134 18-113 (260)
27 3ujc_A Phosphoethanolamine N-m 99.0 8E-10 2.7E-14 79.3 7.3 79 53-134 44-130 (266)
28 3g07_A 7SK snRNA methylphospha 99.0 6E-10 2.1E-14 82.1 6.7 42 65-107 46-88 (292)
29 3vc1_A Geranyl diphosphate 2-C 99.0 9.1E-10 3.1E-14 81.6 7.7 88 45-134 97-195 (312)
30 3dlc_A Putative S-adenosyl-L-m 99.0 9.1E-10 3.1E-14 76.7 6.8 92 39-134 15-121 (219)
31 3kr9_A SAM-dependent methyltra 99.0 2.6E-10 8.8E-15 81.7 4.0 67 65-132 15-92 (225)
32 1nkv_A Hypothetical protein YJ 99.0 1.2E-09 4E-14 78.3 7.2 79 53-134 25-113 (256)
33 1yb2_A Hypothetical protein TA 99.0 6.5E-10 2.2E-14 81.2 5.9 76 53-130 99-185 (275)
34 3jwh_A HEN1; methyltransferase 99.0 5.2E-10 1.8E-14 78.6 4.9 70 64-134 28-112 (217)
35 2qe6_A Uncharacterized protein 99.0 5.6E-10 1.9E-14 81.9 5.2 69 65-134 77-167 (274)
36 3mgg_A Methyltransferase; NYSG 99.0 9.3E-10 3.2E-14 79.8 6.3 71 63-134 35-115 (276)
37 3f4k_A Putative methyltransfer 99.0 1.9E-09 6.5E-14 77.2 7.8 79 54-134 35-124 (257)
38 3dh0_A SAM dependent methyltra 99.0 5.6E-10 1.9E-14 78.3 4.8 80 53-134 26-116 (219)
39 3gu3_A Methyltransferase; alph 99.0 8.1E-10 2.8E-14 80.9 5.7 71 63-134 20-99 (284)
40 3jwg_A HEN1, methyltransferase 99.0 3.7E-10 1.3E-14 79.3 3.6 70 64-134 28-112 (219)
41 3kkz_A Uncharacterized protein 98.9 1.7E-09 5.7E-14 78.3 7.1 78 55-134 36-124 (267)
42 3mb5_A SAM-dependent methyltra 98.9 2.9E-10 1E-14 81.7 3.0 77 53-131 82-169 (255)
43 3dli_A Methyltransferase; PSI- 98.9 1.8E-09 6.2E-14 76.9 7.1 76 54-134 30-111 (240)
44 3gnl_A Uncharacterized protein 98.9 7.8E-10 2.7E-14 80.1 5.1 67 65-132 21-98 (244)
45 3g5l_A Putative S-adenosylmeth 98.9 1.4E-09 4.9E-14 77.9 6.5 77 55-134 35-118 (253)
46 3lec_A NADB-rossmann superfami 98.9 5.2E-10 1.8E-14 80.4 4.1 68 65-133 21-99 (230)
47 3hm2_A Precorrin-6Y C5,15-meth 98.9 7.3E-10 2.5E-14 75.1 4.6 77 55-134 16-104 (178)
48 3g5t_A Trans-aconitate 3-methy 98.9 2.6E-09 9.1E-14 78.5 7.8 70 64-134 35-123 (299)
49 3bus_A REBM, methyltransferase 98.9 1.8E-09 6.1E-14 78.1 6.5 78 54-134 51-139 (273)
50 3ccf_A Cyclopropane-fatty-acyl 98.9 1.3E-09 4.5E-14 79.4 5.8 80 51-134 44-127 (279)
51 3bkw_A MLL3908 protein, S-aden 98.9 2.4E-09 8.1E-14 76.0 6.9 97 35-134 10-117 (243)
52 1jg1_A PIMT;, protein-L-isoasp 98.9 4E-10 1.4E-14 80.3 2.5 79 53-134 80-168 (235)
53 3hem_A Cyclopropane-fatty-acyl 98.9 1.9E-09 6.5E-14 79.4 6.0 77 54-134 62-147 (302)
54 3q87_B N6 adenine specific DNA 98.9 3.5E-09 1.2E-13 72.1 6.3 60 66-132 24-86 (170)
55 4dcm_A Ribosomal RNA large sub 98.9 4E-09 1.4E-13 80.6 7.2 75 55-131 213-299 (375)
56 2o57_A Putative sarcosine dime 98.9 1.9E-09 6.5E-14 79.0 5.2 78 54-134 68-160 (297)
57 3hnr_A Probable methyltransfer 98.9 1.6E-09 5.4E-14 76.0 4.5 77 54-134 35-116 (220)
58 3njr_A Precorrin-6Y methylase; 98.9 4.1E-09 1.4E-13 73.9 6.7 73 56-132 47-130 (204)
59 1pjz_A Thiopurine S-methyltran 98.9 1.6E-09 5.5E-14 75.8 4.2 74 57-134 15-111 (203)
60 1kpg_A CFA synthase;, cyclopro 98.9 3.9E-09 1.3E-13 77.0 6.3 77 54-134 54-139 (287)
61 2p7i_A Hypothetical protein; p 98.9 1.9E-09 6.3E-14 76.4 4.4 67 65-134 42-113 (250)
62 2yxd_A Probable cobalt-precorr 98.9 1.4E-09 4.9E-14 73.7 3.6 75 55-133 26-109 (183)
63 1nv8_A HEMK protein; class I a 98.9 1.6E-09 5.6E-14 79.8 4.2 64 66-131 124-199 (284)
64 2b3t_A Protein methyltransfera 98.9 4.2E-09 1.4E-13 76.8 6.3 66 65-131 109-183 (276)
65 2yqz_A Hypothetical protein TT 98.8 4.8E-09 1.7E-13 75.2 6.5 69 63-134 37-114 (263)
66 3mq2_A 16S rRNA methyltransfer 98.8 7.9E-09 2.7E-13 72.5 7.4 70 57-129 20-103 (218)
67 3b3j_A Histone-arginine methyl 98.8 7E-09 2.4E-13 81.6 7.8 78 53-133 147-233 (480)
68 2pjd_A Ribosomal RNA small sub 98.8 4.2E-09 1.4E-13 79.3 6.3 79 54-134 186-271 (343)
69 2pwy_A TRNA (adenine-N(1)-)-me 98.8 6.5E-09 2.2E-13 74.5 7.0 94 34-130 63-172 (258)
70 3l8d_A Methyltransferase; stru 98.8 1.1E-08 3.8E-13 72.5 8.2 67 65-134 53-126 (242)
71 1xxl_A YCGJ protein; structura 98.8 3.5E-09 1.2E-13 75.5 5.4 78 53-134 10-97 (239)
72 3pfg_A N-methyltransferase; N, 98.8 3.3E-09 1.1E-13 76.5 5.2 67 65-134 50-121 (263)
73 4htf_A S-adenosylmethionine-de 98.8 3E-09 1E-13 77.6 4.7 75 55-134 60-146 (285)
74 4fsd_A Arsenic methyltransfera 98.8 5.6E-09 1.9E-13 79.7 6.3 69 65-134 83-176 (383)
75 1xtp_A LMAJ004091AAA; SGPP, st 98.8 3.6E-09 1.2E-13 75.6 4.9 78 54-134 83-168 (254)
76 1yzh_A TRNA (guanine-N(7)-)-me 98.8 7.5E-09 2.5E-13 72.7 6.3 65 66-131 42-118 (214)
77 3cgg_A SAM-dependent methyltra 98.8 4.2E-09 1.4E-13 71.9 4.8 74 55-133 38-117 (195)
78 1dus_A MJ0882; hypothetical pr 98.8 1.1E-08 3.8E-13 69.7 6.9 76 54-133 42-128 (194)
79 3ofk_A Nodulation protein S; N 98.8 5.5E-09 1.9E-13 73.1 5.3 69 63-134 49-124 (216)
80 1jsx_A Glucose-inhibited divis 98.8 5.5E-09 1.9E-13 72.6 5.3 66 66-132 66-140 (207)
81 2xvm_A Tellurite resistance pr 98.8 8.9E-09 3E-13 70.8 6.1 76 55-134 23-107 (199)
82 3h2b_A SAM-dependent methyltra 98.8 4.5E-09 1.5E-13 72.8 4.6 66 66-134 42-112 (203)
83 3fzg_A 16S rRNA methylase; met 98.8 1.8E-09 6.1E-14 75.6 2.4 67 65-134 49-125 (200)
84 3dxy_A TRNA (guanine-N(7)-)-me 98.8 2.6E-09 8.9E-14 75.8 3.3 66 65-131 34-112 (218)
85 3i9f_A Putative type 11 methyl 98.8 1.3E-09 4.3E-14 73.7 1.4 74 55-134 8-85 (170)
86 2h00_A Methyltransferase 10 do 98.8 7.1E-09 2.4E-13 74.5 5.4 66 65-131 65-147 (254)
87 2yxe_A Protein-L-isoaspartate 98.8 8.6E-09 2.9E-13 72.1 5.7 78 55-134 68-156 (215)
88 3ggd_A SAM-dependent methyltra 98.8 7.3E-09 2.5E-13 73.8 5.4 68 64-134 55-134 (245)
89 1fbn_A MJ fibrillarin homologu 98.8 4.6E-08 1.6E-12 69.4 9.5 71 57-129 67-148 (230)
90 4dzr_A Protein-(glutamine-N5) 98.8 9.4E-10 3.2E-14 76.4 0.6 75 55-130 20-107 (215)
91 3cc8_A Putative methyltransfer 98.8 2.2E-08 7.5E-13 70.1 7.6 88 41-134 10-103 (230)
92 3bkx_A SAM-dependent methyltra 98.8 4E-09 1.4E-13 76.3 3.9 79 54-134 33-132 (275)
93 2fca_A TRNA (guanine-N(7)-)-me 98.8 6.6E-09 2.2E-13 73.3 4.8 64 66-130 39-114 (213)
94 2fk8_A Methoxy mycolic acid sy 98.8 1.1E-08 3.8E-13 75.7 6.3 77 54-134 80-165 (318)
95 3g89_A Ribosomal RNA small sub 98.8 3.7E-09 1.3E-13 76.5 3.5 69 64-133 79-160 (249)
96 3lcc_A Putative methyl chlorid 98.8 5.5E-09 1.9E-13 74.1 4.4 74 56-134 59-142 (235)
97 3lbf_A Protein-L-isoaspartate 98.8 1.2E-08 4.1E-13 71.1 6.1 78 53-134 66-153 (210)
98 1i9g_A Hypothetical protein RV 98.8 1.1E-08 3.8E-13 74.3 5.9 98 30-130 62-177 (280)
99 3e23_A Uncharacterized protein 98.8 7.5E-09 2.6E-13 72.2 4.7 69 63-134 41-112 (211)
100 3ckk_A TRNA (guanine-N(7)-)-me 98.7 1.5E-08 5.2E-13 72.6 6.3 65 65-130 46-129 (235)
101 3tfw_A Putative O-methyltransf 98.7 3.1E-09 1.1E-13 76.6 2.7 67 64-131 62-143 (248)
102 1o54_A SAM-dependent O-methylt 98.7 1.2E-08 4E-13 74.4 5.5 77 53-131 101-188 (277)
103 3ocj_A Putative exported prote 98.7 3E-09 1E-13 78.6 2.4 71 63-134 116-197 (305)
104 3ntv_A MW1564 protein; rossman 98.7 3.6E-09 1.2E-13 75.4 2.6 69 63-132 69-150 (232)
105 2ozv_A Hypothetical protein AT 98.7 1.8E-08 6.2E-13 73.1 6.2 68 63-131 34-122 (260)
106 3grz_A L11 mtase, ribosomal pr 98.7 2.2E-08 7.4E-13 69.6 6.1 66 65-132 60-133 (205)
107 3g2m_A PCZA361.24; SAM-depende 98.7 1.1E-08 3.9E-13 75.1 4.7 88 39-131 57-157 (299)
108 1xdz_A Methyltransferase GIDB; 98.7 5.6E-09 1.9E-13 74.6 3.0 69 63-132 68-149 (240)
109 3m33_A Uncharacterized protein 98.7 1.7E-08 6E-13 71.4 5.4 64 65-131 48-118 (226)
110 1u2z_A Histone-lysine N-methyl 98.7 3.7E-08 1.3E-12 76.6 7.5 79 54-134 232-333 (433)
111 3duw_A OMT, O-methyltransferas 98.7 3.3E-09 1.1E-13 74.7 1.4 68 64-132 57-141 (223)
112 3mti_A RRNA methylase; SAM-dep 98.7 1.7E-08 5.7E-13 69.1 4.7 66 63-131 20-96 (185)
113 2vdv_E TRNA (guanine-N(7)-)-me 98.7 4.9E-08 1.7E-12 70.0 7.3 58 65-123 49-121 (246)
114 1ne2_A Hypothetical protein TA 98.7 2.5E-08 8.5E-13 69.1 5.5 66 65-133 51-119 (200)
115 3fpf_A Mtnas, putative unchara 98.7 1.8E-08 6.2E-13 74.8 5.0 68 63-132 120-196 (298)
116 3sm3_A SAM-dependent methyltra 98.7 3.1E-08 1.1E-12 69.6 6.1 67 65-134 30-111 (235)
117 2pxx_A Uncharacterized protein 98.7 1.9E-08 6.5E-13 69.8 4.9 68 64-133 41-116 (215)
118 1wzn_A SAM-dependent methyltra 98.7 3.3E-08 1.1E-12 70.6 6.2 74 54-131 31-112 (252)
119 3m70_A Tellurite resistance pr 98.7 1.6E-08 5.6E-13 73.7 4.7 77 54-134 110-194 (286)
120 3p2e_A 16S rRNA methylase; met 98.7 2.2E-08 7.4E-13 71.3 5.1 58 65-124 24-92 (225)
121 3e8s_A Putative SAM dependent 98.7 8.1E-09 2.8E-13 72.2 2.8 76 55-134 43-126 (227)
122 1af7_A Chemotaxis receptor met 98.7 2.5E-08 8.5E-13 73.3 5.5 68 66-134 106-223 (274)
123 3d2l_A SAM-dependent methyltra 98.7 1.9E-08 6.6E-13 71.2 4.8 63 66-132 34-104 (243)
124 1vbf_A 231AA long hypothetical 98.7 3.5E-08 1.2E-12 69.7 6.0 77 54-134 60-144 (231)
125 1nt2_A Fibrillarin-like PRE-rR 98.7 5.5E-08 1.9E-12 68.5 6.9 68 63-131 55-133 (210)
126 2gb4_A Thiopurine S-methyltran 98.7 1.8E-08 6.1E-13 73.1 4.4 67 65-134 68-162 (252)
127 2ipx_A RRNA 2'-O-methyltransfe 98.7 3.1E-08 1.1E-12 70.3 5.6 68 63-131 75-154 (233)
128 2ex4_A Adrenal gland protein A 98.7 1.4E-08 4.9E-13 72.3 3.8 68 65-134 79-156 (241)
129 3bxo_A N,N-dimethyltransferase 98.7 2.9E-08 9.9E-13 70.1 5.3 63 65-130 40-106 (239)
130 1zq9_A Probable dimethyladenos 98.6 3E-08 1E-12 73.0 5.4 75 53-131 17-100 (285)
131 1qam_A ERMC' methyltransferase 98.6 3.7E-08 1.2E-12 71.0 5.8 76 53-132 19-101 (244)
132 2esr_A Methyltransferase; stru 98.6 1.5E-08 5.3E-13 68.7 3.5 66 65-132 31-108 (177)
133 2plw_A Ribosomal RNA methyltra 98.6 1.5E-07 5E-12 65.0 8.3 62 55-121 12-75 (201)
134 2fyt_A Protein arginine N-meth 98.6 5E-08 1.7E-12 73.5 6.4 75 55-132 55-139 (340)
135 2bm8_A Cephalosporin hydroxyla 98.6 4.4E-08 1.5E-12 70.2 5.7 65 66-131 82-159 (236)
136 3lpm_A Putative methyltransfer 98.6 3E-08 1E-12 71.6 4.8 67 63-131 46-126 (259)
137 1g8a_A Fibrillarin-like PRE-rR 98.6 1.8E-07 6.2E-12 65.9 8.7 73 57-131 66-150 (227)
138 1dl5_A Protein-L-isoaspartate 98.6 4.4E-08 1.5E-12 72.9 5.6 80 53-134 64-154 (317)
139 3gjy_A Spermidine synthase; AP 98.6 1.7E-08 5.7E-13 75.7 3.4 64 67-131 91-166 (317)
140 3adn_A Spermidine synthase; am 98.6 3.4E-08 1.2E-12 73.2 5.0 65 65-130 83-163 (294)
141 1y8c_A S-adenosylmethionine-de 98.6 2.4E-08 8E-13 70.7 3.9 67 65-134 37-112 (246)
142 3tma_A Methyltransferase; thum 98.6 4.5E-08 1.5E-12 73.9 5.6 76 53-130 192-278 (354)
143 3iv6_A Putative Zn-dependent a 98.6 2.1E-08 7E-13 73.3 3.5 79 52-134 33-120 (261)
144 1o9g_A RRNA methyltransferase; 98.6 3.1E-08 1.1E-12 71.1 4.4 42 65-107 51-95 (250)
145 3gru_A Dimethyladenosine trans 98.6 5.6E-08 1.9E-12 72.2 5.8 75 53-131 39-121 (295)
146 2gpy_A O-methyltransferase; st 98.6 4.4E-08 1.5E-12 69.5 5.0 69 64-133 53-135 (233)
147 2fhp_A Methylase, putative; al 98.6 2.1E-08 7E-13 68.4 2.9 66 65-132 44-124 (187)
148 3eey_A Putative rRNA methylase 98.6 2.9E-08 9.8E-13 68.5 3.6 69 63-132 20-101 (197)
149 2b25_A Hypothetical protein; s 98.6 8.2E-08 2.8E-12 71.8 6.3 98 31-131 69-194 (336)
150 2qm3_A Predicted methyltransfe 98.6 6.2E-08 2.1E-12 73.8 5.6 66 66-133 173-250 (373)
151 2frn_A Hypothetical protein PH 98.6 4.3E-08 1.5E-12 71.8 4.5 66 65-132 125-200 (278)
152 2yvl_A TRMI protein, hypotheti 98.6 1.4E-07 4.8E-12 67.1 7.1 96 31-130 54-164 (248)
153 1l3i_A Precorrin-6Y methyltran 98.6 2.9E-08 1E-12 67.5 3.3 74 56-133 25-109 (192)
154 3u81_A Catechol O-methyltransf 98.6 2E-08 6.7E-13 70.9 2.4 67 65-132 58-142 (221)
155 1zx0_A Guanidinoacetate N-meth 98.6 1.4E-08 4.8E-13 72.2 1.7 64 65-130 60-134 (236)
156 3q7e_A Protein arginine N-meth 98.6 4.7E-08 1.6E-12 73.9 4.6 66 65-132 66-141 (349)
157 1m6y_A S-adenosyl-methyltransf 98.6 5E-08 1.7E-12 72.6 4.6 66 53-120 15-86 (301)
158 3tr6_A O-methyltransferase; ce 98.6 1.5E-08 5.2E-13 71.3 1.7 67 65-132 64-148 (225)
159 3thr_A Glycine N-methyltransfe 98.6 1.7E-08 5.7E-13 73.8 1.8 77 54-134 47-141 (293)
160 3orh_A Guanidinoacetate N-meth 98.6 1.1E-08 3.8E-13 73.2 0.7 64 65-130 60-134 (236)
161 2y1w_A Histone-arginine methyl 98.6 1.1E-07 3.8E-12 71.7 6.2 77 54-133 40-125 (348)
162 3htx_A HEN1; HEN1, small RNA m 98.5 5.7E-08 2E-12 80.7 4.9 69 65-134 721-806 (950)
163 1p91_A Ribosomal RNA large sub 98.5 7.8E-08 2.7E-12 69.4 5.1 67 65-132 85-156 (269)
164 3evz_A Methyltransferase; NYSG 98.5 1.2E-07 4.1E-12 66.9 5.9 67 63-131 53-130 (230)
165 3uzu_A Ribosomal RNA small sub 98.5 2.3E-08 7.7E-13 73.7 2.2 66 54-121 32-102 (279)
166 3ftd_A Dimethyladenosine trans 98.5 8.2E-08 2.8E-12 69.5 5.1 77 53-132 20-102 (249)
167 2p8j_A S-adenosylmethionine-de 98.5 5.5E-08 1.9E-12 67.4 3.9 68 65-134 23-99 (209)
168 2h1r_A Dimethyladenosine trans 98.5 4.1E-08 1.4E-12 72.8 3.3 74 53-130 31-112 (299)
169 3p9n_A Possible methyltransfer 98.5 5.2E-08 1.8E-12 67.0 3.6 66 65-132 44-121 (189)
170 3gdh_A Trimethylguanosine synt 98.5 2.8E-08 9.5E-13 70.7 2.3 66 65-133 78-153 (241)
171 3fut_A Dimethyladenosine trans 98.5 7E-08 2.4E-12 70.8 4.5 64 53-121 36-103 (271)
172 2avd_A Catechol-O-methyltransf 98.5 6.6E-09 2.3E-13 73.4 -1.1 68 63-131 67-152 (229)
173 2gs9_A Hypothetical protein TT 98.5 1.3E-07 4.6E-12 65.7 5.5 64 65-134 36-105 (211)
174 3a27_A TYW2, uncharacterized p 98.5 6.1E-08 2.1E-12 70.8 3.9 68 63-132 117-194 (272)
175 1ej0_A FTSJ; methyltransferase 98.5 2.1E-07 7.1E-12 62.2 6.2 73 56-133 13-97 (180)
176 2ih2_A Modification methylase 98.5 1.6E-07 5.5E-12 71.9 6.3 73 53-130 28-104 (421)
177 1ri5_A MRNA capping enzyme; me 98.5 1E-07 3.5E-12 69.4 4.9 69 64-134 63-143 (298)
178 2ift_A Putative methylase HI07 98.5 3.6E-08 1.2E-12 68.8 2.3 66 66-133 54-134 (201)
179 3r0q_C Probable protein argini 98.5 1.5E-07 5.2E-12 71.7 5.7 74 56-132 55-137 (376)
180 1iy9_A Spermidine synthase; ro 98.5 6.5E-08 2.2E-12 70.9 3.4 66 65-131 75-155 (275)
181 3tqs_A Ribosomal RNA small sub 98.5 5.4E-08 1.9E-12 70.8 2.9 65 53-121 18-87 (255)
182 1ws6_A Methyltransferase; stru 98.5 3.8E-08 1.3E-12 66.0 1.8 66 65-133 41-119 (171)
183 3bgv_A MRNA CAP guanine-N7 met 98.5 2.4E-07 8.2E-12 68.5 6.2 68 65-134 34-124 (313)
184 1r18_A Protein-L-isoaspartate( 98.5 1.2E-07 4.1E-12 67.0 4.3 70 63-133 82-172 (227)
185 1wy7_A Hypothetical protein PH 98.5 2.9E-07 1E-11 63.8 6.2 65 65-132 49-120 (207)
186 3frh_A 16S rRNA methylase; met 98.5 1.8E-07 6E-12 67.7 5.1 65 63-131 103-175 (253)
187 1g6q_1 HnRNP arginine N-methyl 98.5 1.3E-07 4.5E-12 70.8 4.6 66 65-132 38-113 (328)
188 2pbf_A Protein-L-isoaspartate 98.5 2.9E-07 1E-11 64.8 6.0 70 63-133 78-171 (227)
189 2kw5_A SLR1183 protein; struct 98.5 2.5E-07 8.5E-12 63.9 5.6 61 68-131 32-101 (202)
190 3r3h_A O-methyltransferase, SA 98.5 2.5E-08 8.7E-13 71.7 0.4 66 65-131 60-143 (242)
191 3dou_A Ribosomal RNA large sub 98.5 4.7E-07 1.6E-11 62.8 6.8 61 54-121 14-74 (191)
192 3tm4_A TRNA (guanine N2-)-meth 98.5 1.3E-07 4.6E-12 72.0 4.4 68 63-131 215-293 (373)
193 3c3p_A Methyltransferase; NP_9 98.4 3.8E-08 1.3E-12 68.7 1.2 66 65-131 56-133 (210)
194 1uwv_A 23S rRNA (uracil-5-)-me 98.4 1.8E-07 6.3E-12 72.5 5.1 71 56-130 278-362 (433)
195 1qyr_A KSGA, high level kasuga 98.4 1.3E-07 4.5E-12 68.6 3.8 64 53-120 10-78 (252)
196 3lcv_B Sisomicin-gentamicin re 98.4 4.6E-08 1.6E-12 71.5 1.3 67 65-132 132-206 (281)
197 2cmg_A Spermidine synthase; tr 98.4 3.1E-07 1.1E-11 66.9 5.7 64 65-131 72-146 (262)
198 3k0b_A Predicted N6-adenine-sp 98.4 3.3E-07 1.1E-11 70.4 6.1 77 53-131 190-314 (393)
199 2zfu_A Nucleomethylin, cerebra 98.4 5.5E-07 1.9E-11 62.8 6.7 67 54-134 56-125 (215)
200 2fpo_A Methylase YHHF; structu 98.4 5.9E-08 2E-12 67.7 1.7 65 66-132 55-130 (202)
201 3ldu_A Putative methylase; str 98.4 2.9E-07 1E-11 70.5 5.5 76 53-130 184-307 (385)
202 3bwc_A Spermidine synthase; SA 98.4 9.2E-08 3.2E-12 71.0 2.6 67 64-131 94-176 (304)
203 2pt6_A Spermidine synthase; tr 98.4 9.9E-08 3.4E-12 71.4 2.8 66 65-131 116-196 (321)
204 1xj5_A Spermidine synthase 1; 98.4 1.3E-07 4.5E-12 71.2 3.3 67 64-131 119-201 (334)
205 1sui_A Caffeoyl-COA O-methyltr 98.4 6.4E-08 2.2E-12 69.8 1.4 68 64-132 78-164 (247)
206 2nxc_A L11 mtase, ribosomal pr 98.4 9.7E-08 3.3E-12 69.0 2.4 64 65-131 120-191 (254)
207 1yub_A Ermam, rRNA methyltrans 98.4 9.8E-08 3.3E-12 68.5 2.3 65 53-121 18-87 (245)
208 3dr5_A Putative O-methyltransf 98.4 1.1E-07 3.8E-12 67.5 2.6 65 67-132 58-137 (221)
209 2avn_A Ubiquinone/menaquinone 98.4 3.4E-07 1.1E-11 65.9 5.0 66 65-133 54-123 (260)
210 2hnk_A SAM-dependent O-methylt 98.4 9.3E-08 3.2E-12 68.1 2.0 57 63-120 58-123 (239)
211 1mjf_A Spermidine synthase; sp 98.4 1.7E-07 5.9E-12 68.7 3.4 65 65-131 75-159 (281)
212 1inl_A Spermidine synthase; be 98.4 1.7E-07 6E-12 69.3 3.2 64 66-130 91-169 (296)
213 2o07_A Spermidine synthase; st 98.4 2.5E-07 8.5E-12 68.8 4.0 67 64-131 94-175 (304)
214 2i62_A Nicotinamide N-methyltr 98.4 1.1E-07 3.9E-12 68.0 2.0 69 64-134 55-167 (265)
215 3c3y_A Pfomt, O-methyltransfer 98.4 1.1E-07 3.7E-12 68.0 1.8 67 64-131 69-154 (237)
216 3ldg_A Putative uncharacterize 98.4 5.9E-07 2E-11 68.9 6.0 77 53-131 183-307 (384)
217 3id6_C Fibrillarin-like rRNA/T 98.3 2.1E-06 7E-11 61.6 8.3 77 54-131 63-153 (232)
218 1i1n_A Protein-L-isoaspartate 98.3 6.4E-07 2.2E-11 63.0 5.6 70 63-133 75-160 (226)
219 2i7c_A Spermidine synthase; tr 98.3 1.4E-07 4.6E-12 69.4 2.1 66 64-130 77-157 (283)
220 4df3_A Fibrillarin-like rRNA/T 98.3 9.3E-07 3.2E-11 63.5 6.3 67 63-130 75-153 (233)
221 2aot_A HMT, histamine N-methyl 98.3 5.7E-07 1.9E-11 65.9 5.3 70 65-134 52-145 (292)
222 1uir_A Polyamine aminopropyltr 98.3 2.7E-07 9.4E-12 68.7 3.4 66 65-131 77-158 (314)
223 3cbg_A O-methyltransferase; cy 98.3 1.3E-07 4.6E-12 67.2 1.5 67 65-132 72-156 (232)
224 4hc4_A Protein arginine N-meth 98.3 5.6E-07 1.9E-11 68.9 5.0 62 67-130 85-155 (376)
225 2b2c_A Spermidine synthase; be 98.3 2.1E-07 7.3E-12 69.5 2.4 66 65-131 108-188 (314)
226 3dmg_A Probable ribosomal RNA 98.3 7.5E-07 2.6E-11 68.2 5.4 64 66-132 234-306 (381)
227 2oxt_A Nucleoside-2'-O-methylt 98.3 1.4E-06 4.8E-11 63.5 6.5 64 63-131 72-147 (265)
228 2wa2_A Non-structural protein 98.3 1.1E-06 3.8E-11 64.5 5.9 64 63-131 80-155 (276)
229 4e2x_A TCAB9; kijanose, tetron 98.3 2E-07 6.9E-12 71.5 1.8 77 52-134 95-181 (416)
230 1ixk_A Methyltransferase; open 98.3 6.1E-07 2.1E-11 66.8 4.1 71 58-130 112-193 (315)
231 2r6z_A UPF0341 protein in RSP 98.3 3.7E-07 1.3E-11 66.4 2.8 72 56-131 75-168 (258)
232 1vlm_A SAM-dependent methyltra 98.3 6E-07 2E-11 63.0 3.8 61 66-134 48-112 (219)
233 3bzb_A Uncharacterized protein 98.3 1.6E-06 5.4E-11 63.4 6.1 70 64-135 78-174 (281)
234 3ajd_A Putative methyltransfer 98.2 5.3E-07 1.8E-11 65.8 2.8 72 58-131 77-163 (274)
235 2nyu_A Putative ribosomal RNA 98.2 3.1E-06 1.1E-10 57.9 6.5 71 56-131 13-104 (196)
236 3k6r_A Putative transferase PH 98.2 9.3E-07 3.2E-11 65.0 4.0 66 65-132 125-200 (278)
237 4azs_A Methyltransferase WBDD; 98.2 4.5E-07 1.5E-11 72.6 2.4 66 66-134 67-144 (569)
238 3giw_A Protein of unknown func 98.2 2.7E-06 9.3E-11 62.5 6.1 55 65-120 78-142 (277)
239 2f8l_A Hypothetical protein LM 98.2 1.4E-06 4.8E-11 65.4 4.5 66 65-131 130-208 (344)
240 2jjq_A Uncharacterized RNA met 98.2 2.7E-06 9.2E-11 66.0 6.0 63 65-131 290-360 (425)
241 2yx1_A Hypothetical protein MJ 98.1 1.3E-06 4.5E-11 65.6 3.8 63 65-131 195-265 (336)
242 2igt_A SAM dependent methyltra 98.1 5.7E-07 1.9E-11 67.6 1.6 62 66-130 154-231 (332)
243 2p41_A Type II methyltransfera 98.1 3.7E-06 1.3E-10 62.5 5.8 65 63-131 80-155 (305)
244 2vdw_A Vaccinia virus capping 98.1 2E-06 6.8E-11 63.8 3.9 67 66-134 49-139 (302)
245 2a14_A Indolethylamine N-methy 98.1 2.8E-07 9.7E-12 66.7 -1.0 41 64-106 54-95 (263)
246 2g72_A Phenylethanolamine N-me 98.1 5.9E-07 2E-11 65.6 0.4 41 65-107 71-112 (289)
247 2b78_A Hypothetical protein SM 98.0 9.6E-07 3.3E-11 67.5 1.3 64 65-130 212-291 (385)
248 2yxl_A PH0851 protein, 450AA l 98.0 4.6E-06 1.6E-10 64.9 5.0 71 58-130 253-336 (450)
249 3hp7_A Hemolysin, putative; st 98.0 8.2E-06 2.8E-10 60.4 5.7 75 54-131 74-158 (291)
250 3opn_A Putative hemolysin; str 98.0 3.8E-06 1.3E-10 60.0 3.1 50 55-107 27-78 (232)
251 3bt7_A TRNA (uracil-5-)-methyl 98.0 2.7E-06 9.1E-11 64.6 2.3 51 67-120 215-272 (369)
252 2qfm_A Spermine synthase; sper 98.0 3.1E-06 1.1E-10 64.4 2.6 65 65-131 188-274 (364)
253 3v97_A Ribosomal RNA large sub 98.0 8.9E-06 3E-10 66.7 5.4 77 53-131 179-310 (703)
254 3o4f_A Spermidine synthase; am 98.0 1.2E-05 4.3E-10 59.5 5.7 67 64-131 82-164 (294)
255 3ll7_A Putative methyltransfer 97.9 3.2E-06 1.1E-10 65.4 2.3 62 66-130 94-169 (410)
256 1wxx_A TT1595, hypothetical pr 97.9 1.8E-06 6.1E-11 65.9 0.7 63 65-130 209-285 (382)
257 2as0_A Hypothetical protein PH 97.9 2E-06 6.9E-11 65.8 0.9 64 65-130 217-295 (396)
258 3sso_A Methyltransferase; macr 97.9 1E-05 3.5E-10 62.5 4.6 62 66-131 217-295 (419)
259 4gqb_A Protein arginine N-meth 97.9 1.7E-05 5.9E-10 64.3 5.8 96 28-131 324-435 (637)
260 1sqg_A SUN protein, FMU protei 97.9 6E-06 2.1E-10 63.9 3.0 67 63-130 244-321 (429)
261 2oyr_A UPF0341 protein YHIQ; a 97.9 5.9E-06 2E-10 60.1 2.6 75 53-131 75-171 (258)
262 2okc_A Type I restriction enzy 97.8 1.3E-05 4.3E-10 62.3 4.1 77 53-131 160-260 (445)
263 2b9e_A NOL1/NOP2/SUN domain fa 97.8 2.2E-05 7.5E-10 58.5 5.0 71 58-130 96-180 (309)
264 3c0k_A UPF0064 protein YCCW; P 97.8 3.9E-06 1.3E-10 64.2 0.9 65 65-131 220-300 (396)
265 1wg8_A Predicted S-adenosylmet 97.8 2.9E-05 1E-09 57.1 4.9 63 53-119 11-76 (285)
266 3m6w_A RRNA methylase; rRNA me 97.7 9.9E-06 3.4E-10 63.5 2.3 72 56-130 93-176 (464)
267 2frx_A Hypothetical protein YE 97.7 5.1E-05 1.7E-09 59.7 5.4 65 65-130 117-193 (479)
268 4dmg_A Putative uncharacterize 97.7 1.9E-05 6.4E-10 60.7 2.8 63 66-131 215-287 (393)
269 2k4m_A TR8_protein, UPF0146 pr 97.7 5.8E-05 2E-09 50.4 4.7 55 65-130 35-95 (153)
270 3m4x_A NOL1/NOP2/SUN family pr 97.7 1.2E-05 4E-10 63.0 1.4 73 56-130 97-181 (456)
271 3v97_A Ribosomal RNA large sub 97.6 2.9E-05 9.8E-10 63.7 3.4 63 66-130 540-615 (703)
272 4auk_A Ribosomal RNA large sub 97.5 0.00014 4.9E-09 55.4 5.7 67 64-133 210-279 (375)
273 3ua3_A Protein arginine N-meth 97.5 3.9E-05 1.3E-09 62.8 2.7 96 28-131 379-502 (745)
274 3axs_A Probable N(2),N(2)-dime 97.5 2.2E-05 7.5E-10 60.4 0.7 66 66-131 53-132 (392)
275 3tka_A Ribosomal RNA small sub 97.4 0.00039 1.3E-08 52.4 6.7 66 53-120 46-115 (347)
276 3p8z_A Mtase, non-structural p 97.3 0.00039 1.3E-08 50.1 5.6 76 53-130 67-150 (267)
277 2ar0_A M.ecoki, type I restric 97.2 0.00013 4.3E-09 58.3 2.6 76 54-131 159-268 (541)
278 2xyq_A Putative 2'-O-methyl tr 97.2 0.00042 1.4E-08 51.1 5.2 59 63-131 61-130 (290)
279 2dul_A N(2),N(2)-dimethylguano 97.1 0.0002 7E-09 54.6 2.6 64 66-130 48-137 (378)
280 1i4w_A Mitochondrial replicati 96.9 0.00083 2.8E-08 50.9 4.3 54 66-120 59-116 (353)
281 3s1s_A Restriction endonucleas 96.8 0.0014 4.7E-08 54.7 5.1 66 64-130 320-405 (878)
282 3khk_A Type I restriction-modi 96.8 0.00032 1.1E-08 56.0 1.2 75 53-130 234-335 (544)
283 3lkd_A Type I restriction-modi 96.8 0.0008 2.7E-08 53.7 3.4 65 66-131 222-304 (542)
284 3c6k_A Spermine synthase; sper 96.7 0.0014 4.9E-08 50.0 4.1 63 66-130 206-290 (381)
285 2px2_A Genome polyprotein [con 96.6 0.00095 3.3E-08 48.5 2.4 75 54-130 63-145 (269)
286 3b5i_A S-adenosyl-L-methionine 96.5 0.0069 2.4E-07 46.2 6.8 68 66-134 53-160 (374)
287 3lkz_A Non-structural protein 96.4 0.0046 1.6E-07 45.8 5.1 76 53-130 83-166 (321)
288 2zig_A TTHA0409, putative modi 96.2 0.004 1.4E-07 45.7 3.7 49 54-107 226-275 (297)
289 3gcz_A Polyprotein; flavivirus 96.1 0.0045 1.6E-07 45.4 3.8 44 53-98 79-122 (282)
290 2efj_A 3,7-dimethylxanthine me 96.0 0.021 7.1E-07 43.7 7.2 68 66-134 53-159 (384)
291 3evf_A RNA-directed RNA polyme 95.8 0.0077 2.6E-07 44.1 3.8 43 54-98 64-106 (277)
292 2qy6_A UPF0209 protein YFCK; s 95.6 0.0071 2.4E-07 43.7 2.8 34 65-99 60-106 (257)
293 1rjd_A PPM1P, carboxy methyl t 95.2 0.0089 3E-07 44.8 2.4 55 65-120 97-178 (334)
294 2ld4_A Anamorsin; methyltransf 94.9 0.011 3.9E-07 39.3 2.0 55 63-134 10-73 (176)
295 1zkd_A DUF185; NESG, RPR58, st 94.8 0.044 1.5E-06 42.0 5.1 90 35-132 55-156 (387)
296 3eld_A Methyltransferase; flav 94.1 0.03 1E-06 41.3 2.9 35 63-98 79-113 (300)
297 1m6e_X S-adenosyl-L-methionnin 94.0 0.069 2.3E-06 40.5 4.6 70 64-134 50-149 (359)
298 2py6_A Methyltransferase FKBM; 93.7 0.12 4.2E-06 39.5 5.6 41 64-105 225-268 (409)
299 3cvo_A Methyltransferase-like 93.1 0.19 6.4E-06 35.0 5.3 52 64-119 29-90 (202)
300 1g60_A Adenine-specific methyl 92.2 0.17 5.7E-06 36.2 4.2 49 53-106 202-251 (260)
301 2wk1_A NOVP; transferase, O-me 91.5 0.45 1.5E-05 34.7 5.9 32 66-98 107-143 (282)
302 3ufb_A Type I restriction-modi 91.1 0.14 4.8E-06 40.6 3.1 76 53-130 206-308 (530)
303 1g55_A DNA cytosine methyltran 89.8 0.3 1E-05 36.4 3.8 65 67-131 3-75 (343)
304 2uyo_A Hypothetical protein ML 87.4 0.27 9.2E-06 36.3 2.1 54 65-121 102-165 (310)
305 2oo3_A Protein involved in cat 84.1 0.3 1E-05 35.8 0.9 61 67-130 93-165 (283)
306 3g7u_A Cytosine-specific methy 83.4 1.9 6.6E-05 32.6 5.2 51 68-120 4-56 (376)
307 3iht_A S-adenosyl-L-methionine 83.0 4 0.00014 27.4 5.9 58 37-98 15-72 (174)
308 4fzv_A Putative methyltransfer 82.9 0.87 3E-05 34.3 3.1 67 63-130 146-229 (359)
309 2c7p_A Modification methylase 81.7 1.6 5.5E-05 32.3 4.1 61 67-131 12-78 (327)
310 2g1u_A Hypothetical protein TM 81.1 7.6 0.00026 24.8 6.9 63 67-131 20-91 (155)
311 3llv_A Exopolyphosphatase-rela 79.9 2.5 8.6E-05 26.5 4.1 60 67-130 7-76 (141)
312 3vrd_B FCCB subunit, flavocyto 79.8 1.4 4.7E-05 32.9 3.2 31 67-98 3-35 (401)
313 3r24_A NSP16, 2'-O-methyl tran 78.6 1.7 5.8E-05 32.4 3.2 60 63-130 107-175 (344)
314 3mag_A VP39; methylated adenin 75.2 2.3 7.7E-05 31.4 3.1 52 66-120 61-117 (307)
315 4f3n_A Uncharacterized ACR, CO 74.2 2.2 7.5E-05 33.1 3.0 57 34-98 114-174 (432)
316 3iei_A Leucine carboxyl methyl 74.0 3.2 0.00011 30.9 3.7 94 25-120 48-174 (334)
317 1vpt_A VP39; RNA CAP, poly(A) 72.9 2.7 9.4E-05 31.4 3.1 65 67-133 77-154 (348)
318 3ic5_A Putative saccharopine d 70.8 13 0.00043 22.0 5.5 60 67-130 6-75 (118)
319 3dfz_A SIRC, precorrin-2 dehyd 70.7 6.8 0.00023 27.4 4.6 63 67-131 32-98 (223)
320 3l4b_C TRKA K+ channel protien 70.5 3.7 0.00013 27.9 3.3 59 69-130 3-71 (218)
321 3dqp_A Oxidoreductase YLBE; al 68.5 9.8 0.00033 25.5 5.0 57 69-130 3-69 (219)
322 3hyw_A Sulfide-quinone reducta 68.5 3.9 0.00013 31.0 3.2 31 67-98 3-35 (430)
323 3ggo_A Prephenate dehydrogenas 67.9 6.9 0.00024 28.6 4.4 64 67-131 34-101 (314)
324 3qv2_A 5-cytosine DNA methyltr 67.8 4.8 0.00016 29.8 3.5 64 67-131 11-83 (327)
325 2bll_A Protein YFBG; decarboxy 67.7 7.6 0.00026 27.8 4.6 50 69-120 3-56 (345)
326 3fwz_A Inner membrane protein 66.6 8.8 0.0003 24.1 4.2 61 67-130 8-77 (140)
327 3slg_A PBGP3 protein; structur 66.5 4.5 0.00015 29.6 3.2 51 67-119 25-79 (372)
328 2aef_A Calcium-gated potassium 65.7 22 0.00074 24.2 6.5 60 67-130 10-77 (234)
329 4h0n_A DNMT2; SAH binding, tra 65.4 5 0.00017 29.7 3.2 65 67-131 4-76 (333)
330 3b1f_A Putative prephenate deh 64.8 10 0.00036 26.8 4.8 64 67-131 7-73 (290)
331 1boo_A Protein (N-4 cytosine-s 64.8 5.6 0.00019 29.2 3.4 39 66-107 253-292 (323)
332 4g65_A TRK system potassium up 62.1 11 0.00036 29.2 4.6 61 68-130 5-74 (461)
333 3kkj_A Amine oxidase, flavin-c 60.9 5.9 0.0002 26.3 2.7 30 68-98 4-33 (336)
334 2vvp_A Ribose-5-phosphate isom 59.8 6.8 0.00023 26.2 2.7 47 70-117 65-113 (162)
335 2dph_A Formaldehyde dismutase; 58.7 8.4 0.00029 28.8 3.5 45 63-108 183-229 (398)
336 3e48_A Putative nucleoside-dip 58.3 11 0.00038 26.3 3.9 59 69-130 3-71 (289)
337 3ew7_A LMO0794 protein; Q8Y8U8 58.0 8.2 0.00028 25.6 3.0 58 69-130 3-67 (221)
338 4eqs_A Coenzyme A disulfide re 58.0 13 0.00045 28.2 4.5 30 68-98 2-33 (437)
339 3he8_A Ribose-5-phosphate isom 57.4 7.8 0.00027 25.5 2.7 47 71-118 62-110 (149)
340 3s5p_A Ribose 5-phosphate isom 56.3 8.8 0.0003 25.7 2.8 46 71-117 83-130 (166)
341 1o1x_A Ribose-5-phosphate isom 56.2 7.2 0.00025 25.9 2.4 48 70-118 73-122 (155)
342 3fpz_A Thiazole biosynthetic e 56.0 10 0.00034 27.3 3.4 31 67-98 66-98 (326)
343 1lss_A TRK system potassium up 55.9 17 0.00059 22.1 4.1 62 67-131 5-76 (140)
344 3ryc_A Tubulin alpha chain; al 53.8 10 0.00034 29.5 3.2 38 54-91 123-165 (451)
345 1f8f_A Benzyl alcohol dehydrog 53.8 13 0.00046 27.3 3.8 43 63-106 188-232 (371)
346 3ph3_A Ribose-5-phosphate isom 53.3 8.5 0.00029 25.9 2.4 47 71-118 82-130 (169)
347 2b69_A UDP-glucuronate decarbo 52.6 26 0.0009 25.1 5.2 62 67-130 28-97 (343)
348 3ono_A Ribose/galactose isomer 52.5 7.2 0.00025 27.3 2.0 46 70-116 70-117 (214)
349 2ppw_A Conserved domain protei 51.6 6.6 0.00022 27.5 1.7 47 69-116 70-118 (216)
350 4hb9_A Similarities with proba 51.5 8.9 0.0003 28.0 2.5 30 68-98 3-32 (412)
351 3c4a_A Probable tryptophan hyd 51.3 12 0.00041 27.6 3.2 30 68-98 2-33 (381)
352 1eg2_A Modification methylase 51.2 22 0.00075 26.0 4.6 39 65-106 242-284 (319)
353 2vvr_A Ribose-5-phosphate isom 51.1 6.2 0.00021 26.0 1.4 47 70-117 62-110 (149)
354 3k7p_A Ribose 5-phosphate isom 50.8 12 0.0004 25.5 2.7 47 71-118 86-134 (179)
355 3c5y_A Ribose/galactose isomer 50.6 8.2 0.00028 27.3 2.0 47 69-116 86-134 (231)
356 3ubt_Y Modification methylase 50.2 22 0.00074 25.6 4.4 61 68-130 2-67 (331)
357 3lzw_A Ferredoxin--NADP reduct 50.1 12 0.0004 26.5 2.9 31 67-98 8-38 (332)
358 4g6h_A Rotenone-insensitive NA 50.1 11 0.00036 29.4 2.8 32 66-98 42-73 (502)
359 3gvc_A Oxidoreductase, probabl 49.9 20 0.00069 25.3 4.1 52 67-121 30-87 (277)
360 2btq_B Tubulin btubb; structur 49.8 15 0.00051 28.3 3.6 39 53-91 121-164 (426)
361 1ges_A Glutathione reductase; 49.3 16 0.00056 27.7 3.8 31 67-98 5-35 (450)
362 3ryc_B Tubulin beta chain; alp 48.9 13 0.00044 28.9 3.1 39 53-91 120-163 (445)
363 4gcm_A TRXR, thioredoxin reduc 48.5 13 0.00043 26.3 2.9 29 69-98 9-37 (312)
364 1pqw_A Polyketide synthase; ro 48.1 12 0.00042 24.6 2.6 42 63-106 36-80 (198)
365 1m6i_A Programmed cell death p 48.0 15 0.0005 28.4 3.3 32 66-98 11-44 (493)
366 3sx6_A Sulfide-quinone reducta 47.5 14 0.00048 27.8 3.1 31 67-98 5-38 (437)
367 3sgw_A Ribose 5-phosphate isom 47.4 14 0.00048 25.2 2.7 46 71-117 94-141 (184)
368 3r6d_A NAD-dependent epimerase 47.2 18 0.00062 24.1 3.4 62 67-130 6-79 (221)
369 3nix_A Flavoprotein/dehydrogen 47.0 18 0.00061 26.7 3.6 32 67-99 6-37 (421)
370 4gx0_A TRKA domain protein; me 46.8 24 0.00082 27.6 4.4 61 67-130 128-198 (565)
371 3cb2_A Gamma-1-tubulin, tubuli 46.6 19 0.00066 28.1 3.8 39 53-91 122-165 (475)
372 3dhn_A NAD-dependent epimerase 46.2 14 0.00049 24.6 2.8 60 67-130 5-73 (227)
373 3f8d_A Thioredoxin reductase ( 46.0 16 0.00054 25.6 3.0 31 67-98 16-46 (323)
374 4fk1_A Putative thioredoxin re 45.9 15 0.00051 26.0 2.9 29 69-98 9-37 (304)
375 3ab1_A Ferredoxin--NADP reduct 45.8 15 0.0005 26.6 2.9 31 67-98 15-45 (360)
376 3itj_A Thioredoxin reductase 1 45.5 14 0.00047 26.2 2.7 32 66-98 22-53 (338)
377 2zbw_A Thioredoxin reductase; 45.4 16 0.00055 25.9 3.0 31 67-98 6-36 (335)
378 3e1t_A Halogenase; flavoprotei 45.3 19 0.00065 27.8 3.6 32 67-99 8-39 (512)
379 1kol_A Formaldehyde dehydrogen 44.9 21 0.00071 26.5 3.7 44 63-107 183-228 (398)
380 3h2s_A Putative NADH-flavin re 44.8 15 0.0005 24.5 2.6 59 69-130 3-68 (224)
381 2bto_A Tubulin btuba; bacteria 44.8 18 0.00061 28.3 3.3 38 54-91 125-167 (473)
382 3fbs_A Oxidoreductase; structu 44.8 17 0.00058 25.1 3.0 31 67-98 3-33 (297)
383 1id1_A Putative potassium chan 44.7 47 0.0016 20.8 5.0 62 67-131 4-78 (153)
384 3s2e_A Zinc-containing alcohol 44.4 31 0.0011 24.9 4.5 43 63-107 164-208 (340)
385 2hqm_A GR, grase, glutathione 44.2 16 0.00055 27.9 3.0 31 67-98 12-42 (479)
386 4em8_A Ribose 5-phosphate isom 43.9 8.1 0.00028 25.4 1.1 46 71-117 68-115 (148)
387 2xdo_A TETX2 protein; tetracyc 43.9 20 0.00067 26.5 3.4 31 67-98 27-57 (398)
388 1u6z_A Exopolyphosphatase; alp 43.6 14 0.00048 29.0 2.6 20 56-76 129-148 (513)
389 2r9z_A Glutathione amide reduc 43.5 17 0.00058 27.7 3.0 31 67-98 5-35 (463)
390 2e4g_A Tryptophan halogenase; 43.3 15 0.00053 28.7 2.8 32 66-98 25-59 (550)
391 3ruf_A WBGU; rossmann fold, UD 43.3 32 0.0011 24.6 4.4 62 67-130 26-106 (351)
392 3h8l_A NADH oxidase; membrane 43.2 11 0.00039 27.9 2.0 31 67-98 2-35 (409)
393 3iwa_A FAD-dependent pyridine 43.1 23 0.00079 26.9 3.7 32 67-99 4-37 (472)
394 2q7x_A UPF0052 protein SP_1565 43.1 16 0.00054 27.2 2.7 25 67-91 5-31 (326)
395 2aqj_A Tryptophan halogenase, 42.9 15 0.0005 28.6 2.6 31 67-98 6-39 (538)
396 1hdo_A Biliverdin IX beta redu 42.8 35 0.0012 22.1 4.2 52 67-121 4-58 (206)
397 3h28_A Sulfide-quinone reducta 42.7 14 0.0005 27.7 2.5 31 67-98 3-35 (430)
398 3e8x_A Putative NAD-dependent 42.6 23 0.00077 23.9 3.3 61 67-130 22-90 (236)
399 1pl8_A Human sorbitol dehydrog 42.4 24 0.00084 25.7 3.7 44 63-107 169-214 (356)
400 3ic9_A Dihydrolipoamide dehydr 42.1 22 0.00077 27.3 3.6 30 68-98 10-39 (492)
401 4dgk_A Phytoene dehydrogenase; 41.9 13 0.00044 28.3 2.2 32 67-99 2-33 (501)
402 2x3n_A Probable FAD-dependent 41.7 18 0.00062 26.6 2.9 31 67-98 7-37 (399)
403 3c4n_A Uncharacterized protein 41.6 24 0.00082 26.2 3.6 31 67-98 37-69 (405)
404 3mdq_A Exopolyphosphatase; str 41.6 14 0.00047 27.0 2.2 19 57-76 123-142 (315)
405 3atr_A Conserved archaeal prot 41.5 19 0.00064 27.3 3.0 30 68-98 8-37 (453)
406 3cgv_A Geranylgeranyl reductas 41.3 17 0.0006 26.4 2.7 31 68-99 6-36 (397)
407 2vou_A 2,6-dihydroxypyridine h 41.0 16 0.00055 27.0 2.5 31 67-98 6-36 (397)
408 3dme_A Conserved exported prot 41.0 19 0.00066 25.7 2.9 32 67-99 5-36 (369)
409 2pyx_A Tryptophan halogenase; 40.9 13 0.00044 28.9 2.0 32 67-99 8-51 (526)
410 4a5l_A Thioredoxin reductase; 40.8 16 0.00056 25.6 2.4 30 68-98 6-35 (314)
411 3cty_A Thioredoxin reductase; 40.7 21 0.00073 25.2 3.0 31 67-98 17-47 (319)
412 4dna_A Probable glutathione re 40.6 25 0.00086 26.6 3.6 30 68-98 7-36 (463)
413 1k0i_A P-hydroxybenzoate hydro 40.2 13 0.00046 27.2 2.0 30 68-98 4-33 (394)
414 1fec_A Trypanothione reductase 40.2 16 0.00053 28.2 2.4 30 67-97 4-34 (490)
415 2zwa_A Leucine carboxyl methyl 39.8 22 0.00076 28.7 3.3 39 65-104 107-153 (695)
416 1t0c_A Insulin; type I beta-tu 39.7 5.4 0.00018 18.3 -0.2 9 70-78 10-18 (31)
417 2q7v_A Thioredoxin reductase; 39.7 22 0.00077 25.1 3.0 32 67-99 9-40 (325)
418 3c85_A Putative glutathione-re 39.6 44 0.0015 21.6 4.3 60 67-130 40-111 (183)
419 3oz2_A Digeranylgeranylglycero 39.6 19 0.00066 25.9 2.7 29 69-98 7-35 (397)
420 3oc4_A Oxidoreductase, pyridin 39.5 23 0.00078 26.8 3.2 31 67-98 3-35 (452)
421 3uko_A Alcohol dehydrogenase c 39.3 29 0.00098 25.6 3.7 45 63-108 191-237 (378)
422 2g5c_A Prephenate dehydrogenas 39.3 33 0.0011 23.9 3.9 63 68-131 3-69 (281)
423 3rp8_A Flavoprotein monooxygen 38.8 20 0.00067 26.5 2.7 31 67-98 24-54 (407)
424 1ej6_A Lambda2; icosahedral, n 38.7 14 0.00048 32.2 1.9 62 65-130 821-888 (1289)
425 3r9u_A Thioredoxin reductase; 38.3 17 0.0006 25.3 2.2 31 67-98 5-36 (315)
426 1pjq_A CYSG, siroheme synthase 38.2 52 0.0018 25.2 5.1 66 63-131 10-79 (457)
427 1onf_A GR, grase, glutathione 38.1 21 0.00072 27.5 2.8 30 68-98 4-33 (500)
428 3o0h_A Glutathione reductase; 37.9 22 0.00075 27.2 2.9 30 68-98 28-57 (484)
429 1trb_A Thioredoxin reductase; 37.9 28 0.00095 24.4 3.3 31 67-98 6-36 (320)
430 3jv7_A ADH-A; dehydrogenase, n 37.8 23 0.0008 25.6 2.9 45 63-108 169-215 (345)
431 1zk7_A HGII, reductase, mercur 37.7 24 0.00081 26.8 3.0 32 67-99 5-36 (467)
432 3urh_A Dihydrolipoyl dehydroge 37.6 22 0.00076 27.2 2.9 30 68-98 27-56 (491)
433 1up7_A 6-phospho-beta-glucosid 37.4 23 0.00078 27.1 2.9 64 67-131 3-80 (417)
434 2wpf_A Trypanothione reductase 37.4 18 0.00062 27.9 2.4 30 67-97 8-38 (495)
435 3sxp_A ADP-L-glycero-D-mannohe 37.2 26 0.0009 25.3 3.1 53 67-121 11-80 (362)
436 3ics_A Coenzyme A-disulfide re 37.1 29 0.00098 27.3 3.5 32 66-98 36-69 (588)
437 3alj_A 2-methyl-3-hydroxypyrid 37.0 20 0.0007 26.1 2.5 31 67-98 12-42 (379)
438 1fl2_A Alkyl hydroperoxide red 36.8 34 0.0012 23.9 3.6 29 68-97 3-31 (310)
439 2q0l_A TRXR, thioredoxin reduc 36.5 26 0.00088 24.5 2.9 30 68-98 3-33 (311)
440 2vns_A Metalloreductase steap3 36.4 47 0.0016 22.4 4.1 59 67-131 29-90 (215)
441 2bcg_G Secretory pathway GDP d 36.4 29 0.00099 26.3 3.3 31 67-98 12-42 (453)
442 2p0y_A Hypothetical protein LP 36.1 15 0.00052 27.4 1.6 25 67-91 11-37 (341)
443 3dje_A Fructosyl amine: oxygen 36.1 25 0.00085 26.2 2.9 31 67-98 7-38 (438)
444 1vdc_A NTR, NADPH dependent th 36.0 23 0.00078 25.1 2.6 31 67-98 9-39 (333)
445 1z7e_A Protein aRNA; rossmann 35.9 32 0.0011 27.5 3.6 53 67-121 316-372 (660)
446 3qvo_A NMRA family protein; st 35.8 64 0.0022 21.7 4.8 61 67-130 24-94 (236)
447 1ryi_A Glycine oxidase; flavop 35.8 26 0.00088 25.4 2.9 31 67-98 18-48 (382)
448 4a9w_A Monooxygenase; baeyer-v 35.6 26 0.00088 24.8 2.8 31 67-98 4-34 (357)
449 3ius_A Uncharacterized conserv 35.4 41 0.0014 23.2 3.8 60 67-130 6-69 (286)
450 2qrv_A DNA (cytosine-5)-methyl 35.2 29 0.001 25.1 3.0 67 65-131 15-90 (295)
451 3kzv_A Uncharacterized oxidore 35.2 35 0.0012 23.4 3.4 52 68-120 4-61 (254)
452 1ps9_A 2,4-dienoyl-COA reducta 35.1 35 0.0012 27.4 3.8 31 67-98 374-404 (671)
453 3qj4_A Renalase; FAD/NAD(P)-bi 35.1 25 0.00087 25.2 2.7 30 68-98 3-35 (342)
454 1ojt_A Surface protein; redox- 35.0 28 0.00095 26.6 3.0 31 67-98 7-37 (482)
455 2qae_A Lipoamide, dihydrolipoy 35.0 28 0.00095 26.4 3.0 32 67-99 3-34 (468)
456 4g65_A TRK system potassium up 35.0 29 0.00098 26.8 3.1 62 66-130 235-306 (461)
457 2cdu_A NADPH oxidase; flavoenz 34.8 33 0.0011 25.8 3.4 30 68-98 2-33 (452)
458 3vyw_A MNMC2; tRNA wobble urid 34.8 50 0.0017 24.3 4.2 32 66-97 97-133 (308)
459 2qa1_A PGAE, polyketide oxygen 34.7 32 0.0011 26.6 3.4 35 63-98 8-42 (500)
460 3l9w_A Glutathione-regulated p 34.7 41 0.0014 25.5 3.9 60 67-130 5-74 (413)
461 2weu_A Tryptophan 5-halogenase 34.5 14 0.00049 28.3 1.3 31 68-99 4-37 (511)
462 3gwf_A Cyclohexanone monooxyge 34.5 38 0.0013 26.6 3.8 31 67-98 9-40 (540)
463 2jl1_A Triphenylmethane reduct 34.3 23 0.00078 24.5 2.3 57 72-130 5-72 (287)
464 3d1c_A Flavin-containing putat 34.3 28 0.00097 25.0 2.9 32 67-99 5-37 (369)
465 3nrn_A Uncharacterized protein 34.2 24 0.00083 26.1 2.6 30 68-98 2-31 (421)
466 3fpc_A NADP-dependent alcohol 34.2 43 0.0015 24.3 3.9 43 63-106 164-208 (352)
467 3klj_A NAD(FAD)-dependent dehy 34.2 35 0.0012 25.4 3.4 32 66-98 9-40 (385)
468 3dgh_A TRXR-1, thioredoxin red 33.9 26 0.00089 26.7 2.7 30 67-97 10-39 (483)
469 3ihm_A Styrene monooxygenase A 33.8 20 0.00069 27.0 2.1 31 67-98 23-53 (430)
470 3uox_A Otemo; baeyer-villiger 33.7 28 0.00094 27.4 2.9 31 67-98 10-40 (545)
471 2eq6_A Pyruvate dehydrogenase 33.6 30 0.001 26.2 3.0 31 67-98 7-37 (464)
472 3l8k_A Dihydrolipoyl dehydroge 33.5 27 0.00091 26.5 2.7 29 68-97 6-34 (466)
473 2dq4_A L-threonine 3-dehydroge 33.5 59 0.002 23.5 4.5 44 63-108 163-208 (343)
474 2gv8_A Monooxygenase; FMO, FAD 33.5 38 0.0013 25.4 3.6 31 67-98 7-39 (447)
475 1jvb_A NAD(H)-dependent alcoho 33.3 47 0.0016 24.0 4.0 43 63-106 168-213 (347)
476 1cdo_A Alcohol dehydrogenase; 33.1 43 0.0015 24.5 3.8 44 63-107 190-235 (374)
477 3lad_A Dihydrolipoamide dehydr 33.0 22 0.00076 27.0 2.2 30 68-98 5-34 (476)
478 4dvj_A Putative zinc-dependent 32.9 30 0.001 25.4 2.9 42 65-107 171-215 (363)
479 2c0c_A Zinc binding alcohol de 32.9 50 0.0017 24.2 4.1 42 63-106 161-205 (362)
480 2h6e_A ADH-4, D-arabinose 1-de 32.8 24 0.00083 25.6 2.3 41 65-106 170-213 (344)
481 2qa2_A CABE, polyketide oxygen 32.7 34 0.0012 26.4 3.2 33 65-98 11-43 (499)
482 1t6c_A Exopolyphosphatase; alp 32.7 14 0.00047 27.1 0.9 11 66-76 139-149 (315)
483 2ivd_A PPO, PPOX, protoporphyr 32.5 36 0.0012 25.6 3.3 34 64-98 14-47 (478)
484 3ka7_A Oxidoreductase; structu 32.3 25 0.00084 26.0 2.3 30 68-98 2-31 (425)
485 3qfa_A Thioredoxin reductase 1 32.2 28 0.00097 26.9 2.7 31 67-98 33-63 (519)
486 3dk9_A Grase, GR, glutathione 32.2 31 0.0011 26.2 2.9 31 67-98 21-51 (478)
487 4b1b_A TRXR, thioredoxin reduc 32.2 38 0.0013 26.7 3.4 29 68-97 44-72 (542)
488 2z30_B TK-subtilisin; thermoco 32.2 26 0.0009 19.1 1.9 35 83-118 25-60 (65)
489 1uuf_A YAHK, zinc-type alcohol 32.1 41 0.0014 24.8 3.5 41 63-105 192-234 (369)
490 3k7m_X 6-hydroxy-L-nicotine ox 32.1 29 0.00099 25.7 2.7 30 68-98 3-32 (431)
491 1rp0_A ARA6, thiazole biosynth 32.0 47 0.0016 23.3 3.7 31 67-98 40-71 (284)
492 1v59_A Dihydrolipoamide dehydr 31.9 34 0.0011 26.0 3.0 31 67-98 6-36 (478)
493 3guy_A Short-chain dehydrogena 31.9 65 0.0022 21.5 4.3 51 68-120 3-58 (230)
494 1zmd_A Dihydrolipoyl dehydroge 31.8 34 0.0012 26.0 3.0 31 67-98 7-37 (474)
495 3k13_A 5-methyltetrahydrofolat 31.8 22 0.00075 26.0 1.9 38 39-78 25-62 (300)
496 1nhp_A NADH peroxidase; oxidor 31.6 38 0.0013 25.4 3.3 30 68-98 2-33 (447)
497 2jhf_A Alcohol dehydrogenase E 31.6 47 0.0016 24.3 3.8 43 63-106 189-233 (374)
498 1xq6_A Unknown protein; struct 31.6 1.1E+02 0.0039 20.2 6.2 51 67-121 5-60 (253)
499 2yqu_A 2-oxoglutarate dehydrog 31.4 35 0.0012 25.7 3.0 31 68-99 3-33 (455)
500 2x4g_A Nucleoside-diphosphate- 31.4 30 0.001 24.6 2.6 60 68-130 15-83 (342)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.95 E-value=2e-28 Score=186.23 Aligned_cols=130 Identities=23% Similarity=0.308 Sum_probs=119.2
Q ss_pred CchhhHHHHhhCCCCChhhhhhCC---CcccccccCchHHHHHHHHHhccccccHHHHhccCCCCCCcceEEeecCCCCH
Q 032721 2 SAWPLVHEAVLDPTIEPFVKVHGE---PAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGD 78 (135)
Q Consensus 2 ~~w~~L~~~vr~g~~~~~~~~~g~---~~~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~ 78 (135)
+.|.+|.+++|+|+ ++|+..+|. ++|+++.++|+....|+++|...+......+++.++ |++..+|||||||+|.
T Consensus 115 ~~~~~L~~~vr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~aM~~~~~~~~~~~~~~~~-~~~~~~v~DvGgG~G~ 192 (353)
T 4a6d_A 115 RCWGHLADAVREGR-NQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFD-LSVFPLMCDLGGGAGA 192 (353)
T ss_dssp HHHTTHHHHHHHTS-CCHHHHHSCCCSSHHHHHTSSHHHHHHHHHHHHTTHHHHHHHHHHSSC-GGGCSEEEEETCTTSH
T ss_pred HHHHHHHHHHhcCC-ChhHHhcCCChHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCeEEeeCCCCCH
Confidence 46999999999999 899999884 578999999999999999999998888889999998 9999999999999999
Q ss_pred HHHHHHHHCCCCCeeEEeechHHHHhCCCC------CCcEEEecCCCCC-CCCCcEEEecccC
Q 032721 79 CLRMILQKHPFICEGINFDLPEVVAEAPSI------PGVTHIGGDMFKS-IPAADAIFMKVHH 134 (135)
Q Consensus 79 ~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~------~rv~~~~gd~~~~-~p~~D~~~l~~vl 134 (135)
++.++++++|+++ ++++|+|.+++.|++. +||++++||||++ .|.+|+|++++||
T Consensus 193 ~~~~l~~~~p~~~-~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~~~~~~vl 254 (353)
T 4a6d_A 193 LAKECMSLYPGCK-ITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVL 254 (353)
T ss_dssp HHHHHHHHCSSCE-EEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCCCCCSEEEEESSG
T ss_pred HHHHHHHhCCCce-eEeccCHHHHHHHHHhhhhcccCceeeecCccccCCCCCceEEEeeeec
Confidence 9999999999999 9999999999887642 7999999999987 5668999999997
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.95 E-value=1.5e-27 Score=182.08 Aligned_cols=131 Identities=44% Similarity=0.795 Sum_probs=122.8
Q ss_pred CchhhHHHHhhCCCCChhhhhhCCCcccccccCchHHHHHHHHHhccccccHHHHhccCCCCCCcceEEeecCCCCHHHH
Q 032721 2 SAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLR 81 (135)
Q Consensus 2 ~~w~~L~~~vr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~ 81 (135)
++|.+|.+++|+|+ ++|+.++|.++|+|+.++|+..+.|+++|..++......+++.++.+++..+|||||||+|.++.
T Consensus 139 ~~~~~L~~~~r~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~ 217 (364)
T 3p9c_A 139 ESWYYLKDAVLDGG-IPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELYHGFEGLGTLVDVGGGVGATVA 217 (364)
T ss_dssp GGGGGHHHHHHHCS-CHHHHHHSSCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHH
T ss_pred HHHhCHHHHHhhCC-ChHHHhcCCCHHHHHHhCHHHHHHHHHHHHHhhHHHHHHHHHhcccccCCCEEEEeCCCCCHHHH
Confidence 57999999999999 89999999999999999999999999999998887778888888657778999999999999999
Q ss_pred HHHHHCCCCCeeEEeechHHHHhCCCCCCcEEEecCCCCCCCCCcEEEecccC
Q 032721 82 MILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKVHH 134 (135)
Q Consensus 82 ~l~~~~p~l~~~~~~D~p~~~~~a~~~~rv~~~~gd~~~~~p~~D~~~l~~vl 134 (135)
.+++++|+++ ++++|+|.+++.+++.+|++++.+|+++++|.+|+|++++||
T Consensus 218 ~l~~~~p~~~-~~~~D~~~~~~~a~~~~~v~~~~~D~~~~~p~~D~v~~~~vl 269 (364)
T 3p9c_A 218 AIAAHYPTIK-GVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTILMKWIL 269 (364)
T ss_dssp HHHHHCTTCE-EEEEECHHHHTTCCCCTTEEEEECCTTTCCCCCSEEEEESCG
T ss_pred HHHHHCCCCe-EEEecCHHHHHhhhhcCCeEEEeCCcCCCCCCCCEEEehHHh
Confidence 9999999999 999999999999998899999999999988888999999987
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.94 E-value=3.3e-27 Score=180.30 Aligned_cols=131 Identities=41% Similarity=0.757 Sum_probs=122.6
Q ss_pred CchhhHHHHhhCCCCChhhhhhCCCcccccccCchHHHHHHHHHhccccccHHHHhccCCCCCCcceEEeecCCCCHHHH
Q 032721 2 SAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLR 81 (135)
Q Consensus 2 ~~w~~L~~~vr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~ 81 (135)
.+|.+|.+++|+|. ++|+.++|.++|+|+.++|+..+.|+++|..++......+++.++.+++..+|||||||+|.++.
T Consensus 141 ~~~~~l~~~~r~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~ 219 (368)
T 3reo_A 141 EPWFYLKDAILEGG-IPFNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVAS 219 (368)
T ss_dssp GGGGGHHHHHHHCS-CHHHHHSSSCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTTCSEEEEETCTTSHHHH
T ss_pred hhhhchHHHHhcCC-CHHHHHhCCCHHHHHhhCHHHHHHHHHHHHhhhhhHHHHHHHhcccccCCCEEEEeCCCcCHHHH
Confidence 57999999999999 89999999999999999999999999999998887778888888657778999999999999999
Q ss_pred HHHHHCCCCCeeEEeechHHHHhCCCCCCcEEEecCCCCCCCCCcEEEecccC
Q 032721 82 MILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKVHH 134 (135)
Q Consensus 82 ~l~~~~p~l~~~~~~D~p~~~~~a~~~~rv~~~~gd~~~~~p~~D~~~l~~vl 134 (135)
.+++++|+++ ++++|+|.+++.+++.++++++.+|+++++|.+|+|++++||
T Consensus 220 ~l~~~~p~~~-~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~vl 271 (368)
T 3reo_A 220 MIVAKYPSIN-AINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIKWIC 271 (368)
T ss_dssp HHHHHCTTCE-EEEEECHHHHTTCCCCTTEEEEECCTTTCCCCCSEEEEESCG
T ss_pred HHHHhCCCCE-EEEEehHHHHHhhhhcCCCEEEecCCCCCCCCCCEEEEechh
Confidence 9999999999 999999999999998899999999999988888999999987
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.92 E-value=6.6e-25 Score=166.19 Aligned_cols=130 Identities=25% Similarity=0.355 Sum_probs=118.3
Q ss_pred CchhhHHHHhhCCCCChhhhhhCCCcccccccCchHHHHHHHHHhccccccHHHHhccCCCCCCcceEEeecCCCCHHHH
Q 032721 2 SAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLR 81 (135)
Q Consensus 2 ~~w~~L~~~vr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~ 81 (135)
++|.+|++++|+|+ ++|+..+|.++|+|+.++|+..+.|+++|...+......+++.++ +++..+|||||||+|.++.
T Consensus 123 ~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~-~~~~~~vLDvG~G~G~~~~ 200 (348)
T 3lst_A 123 TMSHRVASALGPER-PAFADIFGSSLDAYFDGDAEVEALYYEGMETVSAAEHLILARAGD-FPATGTVADVGGGRGGFLL 200 (348)
T ss_dssp HHHHTHHHHTCTTC-CCHHHHHSSCHHHHHTTCHHHHHHHHHHHHHHHHTTHHHHHHHSC-CCSSEEEEEETCTTSHHHH
T ss_pred HHHHHHHHHHhcCC-ChhhHHhCCCHHHHHHhCHHHHHHHHHHHHHhhhhhHHHHHHhCC-ccCCceEEEECCccCHHHH
Confidence 46999999999999 899999999999999999999999999999998888888999998 9888999999999999999
Q ss_pred HHHHHCCCCCeeEEeechHHHHhCCC-----CCCcEEEecCCCCCCCCCcEEEecccC
Q 032721 82 MILQKHPFICEGINFDLPEVVAEAPS-----IPGVTHIGGDMFKSIPAADAIFMKVHH 134 (135)
Q Consensus 82 ~l~~~~p~l~~~~~~D~p~~~~~a~~-----~~rv~~~~gd~~~~~p~~D~~~l~~vl 134 (135)
.+++++|+++ ++++|+|.++..++. .+|++++.+|+++++|.+|+|+++++|
T Consensus 201 ~l~~~~p~~~-~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~p~~D~v~~~~vl 257 (348)
T 3lst_A 201 TVLREHPGLQ-GVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRIL 257 (348)
T ss_dssp HHHHHCTTEE-EEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCCCCCSEEEEESCG
T ss_pred HHHHHCCCCE-EEEecCHHHhhcccccccCCCCCeEEEecCCCCCCCCCcEEEEehhc
Confidence 9999999999 999999888873322 168999999999778966999999986
No 5
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.91 E-value=1.2e-24 Score=165.31 Aligned_cols=129 Identities=32% Similarity=0.523 Sum_probs=118.1
Q ss_pred CchhhHHHHhhCC--CCChhhhhhCCCcccccccCchHHH--HHHHHHhccccccHHHHhccC--CCCCCcceEEeecCC
Q 032721 2 SAWPLVHEAVLDP--TIEPFVKVHGEPAYSYYGKKPEMNG--LMRKAMSGVSVPFMTSVLDGY--DGFKGVKRLVDVGGS 75 (135)
Q Consensus 2 ~~w~~L~~~vr~g--~~~~~~~~~g~~~~e~~~~~~~~~~--~f~~~m~~~~~~~~~~~~~~~--~~~~~~~~vvDvGgG 75 (135)
.+|.+|++++|+| . ++|+.++|.++|+|+.++|+..+ .|+++|...+.... .+++.+ + +++..+|||||||
T Consensus 127 ~~~~~L~~~l~~g~~~-~~~~~~~g~~~~~~~~~~p~~~~~~~f~~~m~~~~~~~~-~~~~~~~~~-~~~~~~vlDvG~G 203 (358)
T 1zg3_A 127 DMWSSSKKWFNEDKEQ-TLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFK-LVLQENKRV-FEGLESLVDVGGG 203 (358)
T ss_dssp GGGGGHHHHHHCSCCC-CHHHHHHSSCHHHHHTSGGGHHHHHHHHHHHHHHHHTHH-HHHHHTHHH-HHTCSEEEEETCT
T ss_pred HHHHHHHHHHhCCCCC-ChHHHHhCCCHHHHHhcChhhhhHHHHHHHHhcccHHHH-HHHHhcchh-ccCCCEEEEECCC
Confidence 5799999999999 5 89999999999999999999999 99999998877665 788888 5 7777899999999
Q ss_pred CCHHHHHHHHHCCCCCeeEEeechHHHHhCCCCCCcEEEecCCCCCCCCCcEEEecccC
Q 032721 76 AGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKVHH 134 (135)
Q Consensus 76 ~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~~rv~~~~gd~~~~~p~~D~~~l~~vl 134 (135)
+|.++..+++++|+++ ++++|+|.+++.+++.++++++.+|+++++|.+|+|+++++|
T Consensus 204 ~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~vl 261 (358)
T 1zg3_A 204 TGGVTKLIHEIFPHLK-CTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVL 261 (358)
T ss_dssp TSHHHHHHHHHCTTSE-EEEEECHHHHSSCCCCSSEEEEECCTTTCCCCCSEEEEESCG
T ss_pred cCHHHHHHHHHCCCCe-EEEeccHHHHhhcccCCCcEEEeCccCCCCCCceEEEEcccc
Confidence 9999999999999999 999999999999988778999999999988888999999986
No 6
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.91 E-value=1.3e-24 Score=164.61 Aligned_cols=129 Identities=30% Similarity=0.485 Sum_probs=118.2
Q ss_pred CchhhHHHHhh-CCCCChhhhhhCCCcccccccCchHHHHHHHHHhccccccHHHHhccC--CCCCCcceEEeecCCCCH
Q 032721 2 SAWPLVHEAVL-DPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGY--DGFKGVKRLVDVGGSAGD 78 (135)
Q Consensus 2 ~~w~~L~~~vr-~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~--~~~~~~~~vvDvGgG~G~ 78 (135)
.+|.+|++++| +|+ ++|+.++|.++|+|+.++|+..+.|+++|...+...... ++.+ + +++..+|||||||+|.
T Consensus 125 ~~~~~L~~~l~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~-~~~~~~~-~~~~~~vlDvG~G~G~ 201 (352)
T 1fp2_A 125 GSYHELKKWIYEEDL-TLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLA-LRDCDFV-FDGLESIVDVGGGTGT 201 (352)
T ss_dssp HGGGGHHHHHTCSSC-CHHHHHHSSCHHHHHHHCHHHHHHHHHHHHHTHHHHHHH-HHTCHHH-HTTCSEEEEETCTTSH
T ss_pred HHHHHHHHHHHhcCC-ChHHHHcCCCHHHHHHhChHHHHHHHHHHHhcchhhhhH-HHhcccc-cccCceEEEeCCCccH
Confidence 46899999999 888 899999999999999999999999999999988776666 7777 5 7777899999999999
Q ss_pred HHHHHHHHCCCCCeeEEeechHHHHhCCCCCCcEEEecCCCCCCCCCcEEEecccC
Q 032721 79 CLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKVHH 134 (135)
Q Consensus 79 ~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~~rv~~~~gd~~~~~p~~D~~~l~~vl 134 (135)
++..+++++|+++ ++++|+|.+++.+++.++++++.+|+++++|.+|+|+++++|
T Consensus 202 ~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~~l 256 (352)
T 1fp2_A 202 TAKIICETFPKLK-CIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYIL 256 (352)
T ss_dssp HHHHHHHHCTTCE-EEEEECHHHHTTCCCBTTEEEEECCTTTCCCCCSEEEEESCG
T ss_pred HHHHHHHHCCCCe-EEEeeCHHHHhhcccCCCcEEEeccccCCCCCccEEEeehhh
Confidence 9999999999999 999999999999988778999999999988888999999986
No 7
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.91 E-value=6.5e-25 Score=164.98 Aligned_cols=130 Identities=19% Similarity=0.292 Sum_probs=119.5
Q ss_pred CchhhHHHHhhCCCCChhhhhhCCCcccccccCchHHHHHHHHHhccccccHHHHhccCCCCCCcceEEeecCCCCHHHH
Q 032721 2 SAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLR 81 (135)
Q Consensus 2 ~~w~~L~~~vr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~ 81 (135)
..|.+|.+++++|+ ++|+..+|.++|+|+.++|+..+.|+++|...+....+.+++.++ +++..+|+|||||+|.++.
T Consensus 108 ~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~-~~~~~~vlDvG~G~G~~~~ 185 (332)
T 3i53_A 108 LGFVELAHSIRTGQ-PAYPVRYGTSFWEDLGSDPVLSASFDTLMSHHLELDYTGIAAKYD-WAALGHVVDVGGGSGGLLS 185 (332)
T ss_dssp GGGGGHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHHHHTTGGGSSC-CGGGSEEEEETCTTSHHHH
T ss_pred HHHHHhHHHHhcCC-CHHHHhhCCCHHHHHHhCHHHHHHHHHHHHHhHHhhHHHHHHhCC-CCCCCEEEEeCCChhHHHH
Confidence 57999999999999 899999999999999999999999999999988777778889998 8888999999999999999
Q ss_pred HHHHHCCCCCeeEEeechHHHHhCCCC-------CCcEEEecCCCCCCC-CCcEEEecccC
Q 032721 82 MILQKHPFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKSIP-AADAIFMKVHH 134 (135)
Q Consensus 82 ~l~~~~p~l~~~~~~D~p~~~~~a~~~-------~rv~~~~gd~~~~~p-~~D~~~l~~vl 134 (135)
.+++++|+++ ++++|+|.+++.+++. +||+++.+|+++++| .+|+|++++||
T Consensus 186 ~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~v~~~~vl 245 (332)
T 3i53_A 186 ALLTAHEDLS-GTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVLSAVL 245 (332)
T ss_dssp HHHHHCTTCE-EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSEEEEESCG
T ss_pred HHHHHCCCCe-EEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcEEEEehhh
Confidence 9999999999 9999999999988742 689999999998788 46999999987
No 8
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.91 E-value=1.5e-24 Score=165.49 Aligned_cols=131 Identities=44% Similarity=0.823 Sum_probs=107.4
Q ss_pred CchhhHHHHhhCC-CCChhhhhhCCCcccccccCchHHHHHHHHHhccccccHHHHhccCCCCCCcceEEeecCCCCHHH
Q 032721 2 SAWPLVHEAVLDP-TIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCL 80 (135)
Q Consensus 2 ~~w~~L~~~vr~g-~~~~~~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~ 80 (135)
.+|.+|++++|+| + ++|+.++|.++|+|+.++|+..+.|+++|...+......+++.++.+++..+|||||||+|.++
T Consensus 146 ~~~~~L~~~l~~g~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~~~~~~~~~~~vLDvG~G~G~~~ 224 (372)
T 1fp1_D 146 QVWMNFKEAVVDEDI-DLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNL 224 (372)
T ss_dssp HHHTTHHHHHHSCC---------------CCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCTTSHHH
T ss_pred HHHHHHHHHHHcCCC-ChhHHHhCCCHHHHHHhCHHHHHHHHHHHHhhhHHHHHHHHHHhhccCCCCEEEEeCCCCcHHH
Confidence 3589999999999 7 8999999999999999999999999999999887777788888854777789999999999999
Q ss_pred HHHHHHCCCCCeeEEeechHHHHhCCCCCCcEEEecCCCCCCCCCcEEEecccC
Q 032721 81 RMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKVHH 134 (135)
Q Consensus 81 ~~l~~~~p~l~~~~~~D~p~~~~~a~~~~rv~~~~gd~~~~~p~~D~~~l~~vl 134 (135)
..+++++|+++ ++++|+|.+++.+++.++++++.+|+++++|.+|+|+++++|
T Consensus 225 ~~l~~~~~~~~-~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~~l 277 (372)
T 1fp1_D 225 ELIISKYPLIK-GINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVC 277 (372)
T ss_dssp HHHHHHCTTCE-EEEEECHHHHTTCCCCTTEEEEECCTTTCCCCEEEEEEESSG
T ss_pred HHHHHHCCCCe-EEEeChHHHHHhhhhcCCCEEEeCCcccCCCCCCEEEEeccc
Confidence 99999999999 999999999999988889999999999988878999999986
No 9
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.91 E-value=1.2e-24 Score=165.98 Aligned_cols=130 Identities=28% Similarity=0.469 Sum_probs=119.8
Q ss_pred CchhhHHHHhhCCCCChhhhhhCCCcccccccCchHHHHHHHHHhccccccHHHHhccCCCCCCcceEEeecCCCCHHHH
Q 032721 2 SAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLR 81 (135)
Q Consensus 2 ~~w~~L~~~vr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~ 81 (135)
..|.+|.+++++|+ ++|+..+|.++|+|+.++|+..+.|+++|...+......+++.++ +++..+|||||||+|.++.
T Consensus 141 ~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~~~~-~~~~~~vlDvG~G~G~~~~ 218 (369)
T 3gwz_A 141 RAWEQLTHSVRTGE-ASFDVANGTSFWQLTHEDPKARELFNRAMGSVSLTEAGQVAAAYD-FSGAATAVDIGGGRGSLMA 218 (369)
T ss_dssp HHHHTHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSC-CTTCSEEEEETCTTSHHHH
T ss_pred HHHHhHHHHHhCCC-ChhHhhcCCCHHHHHHhCHHHHHHHHHHHHHHHhhhHHHHHHhCC-CccCcEEEEeCCCccHHHH
Confidence 46999999999999 899999999999999999999999999999988887888999998 9888999999999999999
Q ss_pred HHHHHCCCCCeeEEeechHHHHhCCC-------CCCcEEEecCCCCCCCC-CcEEEecccC
Q 032721 82 MILQKHPFICEGINFDLPEVVAEAPS-------IPGVTHIGGDMFKSIPA-ADAIFMKVHH 134 (135)
Q Consensus 82 ~l~~~~p~l~~~~~~D~p~~~~~a~~-------~~rv~~~~gd~~~~~p~-~D~~~l~~vl 134 (135)
.+++++|+++ ++++|+|.+++.+++ .+||+++.+|+++++|. +|+|++++||
T Consensus 219 ~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~D~v~~~~vl 278 (369)
T 3gwz_A 219 AVLDAFPGLR-GTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLIKHVL 278 (369)
T ss_dssp HHHHHCTTCE-EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSCSEEEEESCG
T ss_pred HHHHHCCCCe-EEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCceEEEhhhhh
Confidence 9999999999 999999999988874 26899999999977884 6999999987
No 10
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.88 E-value=2.6e-23 Score=156.14 Aligned_cols=127 Identities=31% Similarity=0.474 Sum_probs=116.3
Q ss_pred chhhHHHHhhCCCCChhhhhhCCCcccccccCchHHHHHHHHHhccccccHHHHhccCCCCCCcceEEeecCCCCHHHHH
Q 032721 3 AWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRM 82 (135)
Q Consensus 3 ~w~~L~~~vr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~ 82 (135)
.|.+|.+++++|+ ++|+..+|.++|+|+.++|+..+.|+++| ..+......+++.++ +++ .+|+|||||+|.++..
T Consensus 109 ~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m-~~~~~~~~~~~~~~~-~~~-~~vlDvG~G~G~~~~~ 184 (334)
T 2ip2_A 109 AWTPACEALLSGT-PGFELAFGEDFYSYLKRCPDAGRRFLLAM-KASNLAFHEIPRLLD-FRG-RSFVDVGGGSGELTKA 184 (334)
T ss_dssp HTTTHHHHHHHCC-CHHHHHHSSCHHHHHHHCHHHHHHHHHHH-GGGHHHHHHHHHHSC-CTT-CEEEEETCTTCHHHHH
T ss_pred HHHHHHHHHhcCC-ChhhhhcCCCHHHHHhhChHHHHHHHHHH-HHHHHHHHHHHHhCC-CCC-CEEEEeCCCchHHHHH
Confidence 5899999999999 89999999999999999999999999999 887777788899897 888 9999999999999999
Q ss_pred HHHHCCCCCeeEEeechHHHHhCCCC-------CCcEEEecCCCCCCCC-CcEEEecccC
Q 032721 83 ILQKHPFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKSIPA-ADAIFMKVHH 134 (135)
Q Consensus 83 l~~~~p~l~~~~~~D~p~~~~~a~~~-------~rv~~~~gd~~~~~p~-~D~~~l~~vl 134 (135)
+++++|+.+ ++++|+|.+++.+++. ++++++.+|+++++|. .|+|+++++|
T Consensus 185 l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl 243 (334)
T 2ip2_A 185 ILQAEPSAR-GVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRII 243 (334)
T ss_dssp HHHHCTTCE-EEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCSSCSEEEEESCG
T ss_pred HHHHCCCCE-EEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCCCCCEEEEchhc
Confidence 999999999 9999998888887653 6899999999998876 5999999986
No 11
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.86 E-value=6.4e-22 Score=149.88 Aligned_cols=130 Identities=21% Similarity=0.412 Sum_probs=118.1
Q ss_pred CchhhHHHHhhCCCCChhhhhhCCCcccccccCchHHHHHHHHHhccccccHHHHhccCCCCCCcceEEeecCCCCHHHH
Q 032721 2 SAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLR 81 (135)
Q Consensus 2 ~~w~~L~~~vr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~ 81 (135)
..|.+|.+++++|+ ++|+..+|.++|+++..+|+....|..+|...+......+++.++ +.+..+|+|||||+|.++.
T Consensus 122 ~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~p~~~~~f~~~~~~~~~~~~~~l~~~~~-~~~~~~vLDvG~G~G~~~~ 199 (360)
T 1tw3_A 122 ISFTRLPDAIRTGR-PTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYD-WTNVRHVLDVGGGKGGFAA 199 (360)
T ss_dssp GGGGGHHHHHHHCC-CCHHHHHSSCHHHHHHTCHHHHHHHHHHHTTTTTTTTHHHHHHSC-CTTCSEEEEETCTTSHHHH
T ss_pred HHHHHHHHHHHcCC-CHHHHhcCCCHHHHHHhChHHHHHHHHHHHHHHHHhHHHHHHhCC-CccCcEEEEeCCcCcHHHH
Confidence 57899999999999 889999999999999999999999999999988887788899997 8888899999999999999
Q ss_pred HHHHHCCCCCeeEEeechHHHHhCCCC-------CCcEEEecCCCCCCCC-CcEEEecccC
Q 032721 82 MILQKHPFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKSIPA-ADAIFMKVHH 134 (135)
Q Consensus 82 ~l~~~~p~l~~~~~~D~p~~~~~a~~~-------~rv~~~~gd~~~~~p~-~D~~~l~~vl 134 (135)
.+++++|+++ ++++|+|.+++.++++ ++++++.+|+++++|. .|+|+++++|
T Consensus 200 ~l~~~~~~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl 259 (360)
T 1tw3_A 200 AIARRAPHVS-ATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVL 259 (360)
T ss_dssp HHHHHCTTCE-EEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEEESCG
T ss_pred HHHHhCCCCE-EEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCccEEEEcccc
Confidence 9999999999 9999998888887642 4899999999988887 5999999886
No 12
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.86 E-value=5.6e-22 Score=150.80 Aligned_cols=130 Identities=23% Similarity=0.341 Sum_probs=118.4
Q ss_pred CchhhHHHHhhCCCCChhhhhhCCCcccccccCchHHHHHHHHHhccccccHHHHhccCCCCCCcceEEeecCCCCHHHH
Q 032721 2 SAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLR 81 (135)
Q Consensus 2 ~~w~~L~~~vr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~ 81 (135)
..|.+|.+++++|+ ++|+..+|.++|+++..+|+....|+++|...+......+++.++ +.+..+|+|||||+|.++.
T Consensus 121 ~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~vlDvG~G~G~~~~ 198 (374)
T 1qzz_A 121 LAFTGLLDVVRTGR-PAYAGRYGRPFWEDLSADVALADSFDALMSCDEDLAYEAPADAYD-WSAVRHVLDVGGGNGGMLA 198 (374)
T ss_dssp GGGGGHHHHHHHSC-CSHHHHHSSCHHHHHHHCHHHHHHHHHTCGGGSTTTTHHHHHTSC-CTTCCEEEEETCTTSHHHH
T ss_pred HHHHHHHHHHhcCC-ChhhhhhCCCHHHHHhhChHHHHHHHHHHHHhhHhHHHHHHHhCC-CCCCCEEEEECCCcCHHHH
Confidence 57899999999999 889999999999999999999999999999988877788999887 8888999999999999999
Q ss_pred HHHHHCCCCCeeEEeechHHHHhCCCC-------CCcEEEecCCCCCCCC-CcEEEecccC
Q 032721 82 MILQKHPFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKSIPA-ADAIFMKVHH 134 (135)
Q Consensus 82 ~l~~~~p~l~~~~~~D~p~~~~~a~~~-------~rv~~~~gd~~~~~p~-~D~~~l~~vl 134 (135)
.+++++|+++ ++++|+|.+++.++++ ++++++.+|+++++|. .|+|+++++|
T Consensus 199 ~l~~~~~~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl 258 (374)
T 1qzz_A 199 AIALRAPHLR-GTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVL 258 (374)
T ss_dssp HHHHHCTTCE-EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEESCG
T ss_pred HHHHHCCCCE-EEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCCEEEEeccc
Confidence 9999999999 9999998899887642 4899999999988887 5999999886
No 13
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.86 E-value=6.8e-22 Score=150.51 Aligned_cols=127 Identities=22% Similarity=0.247 Sum_probs=105.4
Q ss_pred CchhhHHHHhhCCCCChhhhhhC--CCcccccccCchHHH----HHHHHHhccccccHHHHhccCCCCCCcceEEeecCC
Q 032721 2 SAWPLVHEAVLDPTIEPFVKVHG--EPAYSYYGKKPEMNG----LMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGS 75 (135)
Q Consensus 2 ~~w~~L~~~vr~g~~~~~~~~~g--~~~~e~~~~~~~~~~----~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG 75 (135)
++|.+|++++|+|+ +++...+| .++|+++.++|+..+ .|+.+|..... ..+++.+. ..+..+|||||||
T Consensus 115 ~~~~~L~~~lr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~---~~~l~~~~-~~~~~~vlDvG~G 189 (363)
T 3dp7_A 115 QGLFHLEEALLNGR-PEGLKVFGEWPTIYEGLSQLPEQVQKSWFGFDHFYSDQSF---GKALEIVF-SHHPKRLLDIGGN 189 (363)
T ss_dssp HHHTTHHHHHHHSS-CGGGGGTCCCSSHHHHGGGSCHHHHHHHHHHHHHTTCCCC---HHHHHHHG-GGCCSEEEEESCT
T ss_pred hhHHHHHHHHhcCC-CccccccCchHhHHHHHhhCHHHHHHHHHHHHHHhhhhhH---HHHHHHhc-ccCCCEEEEeCCC
Confidence 46999999999999 78888888 689999999998776 36777765442 23444443 3566899999999
Q ss_pred CCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC-------CCcEEEecCCCCC---CCC-CcEEEecccC
Q 032721 76 AGDCLRMILQKHPFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS---IPA-ADAIFMKVHH 134 (135)
Q Consensus 76 ~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~-------~rv~~~~gd~~~~---~p~-~D~~~l~~vl 134 (135)
+|.++..+++++|+++ ++++|+|.+++.|++. +|++++.+|+++. +|. +|+|++++||
T Consensus 190 ~G~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~vl 258 (363)
T 3dp7_A 190 TGKWATQCVQYNKEVE-VTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQFL 258 (363)
T ss_dssp TCHHHHHHHHHSTTCE-EEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESCS
T ss_pred cCHHHHHHHHhCCCCE-EEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEechh
Confidence 9999999999999999 9999999999887642 5899999999985 664 5999999987
No 14
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.82 E-value=3e-20 Score=140.90 Aligned_cols=120 Identities=21% Similarity=0.306 Sum_probs=106.8
Q ss_pred CchhhHHHHhhCCCCChhhhhhCCCcccccccCch---HHHHHHHHHhcccc-ccHHHHhccCCCCCCcceEEeecCCCC
Q 032721 2 SAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPE---MNGLMRKAMSGVSV-PFMTSVLDGYDGFKGVKRLVDVGGSAG 77 (135)
Q Consensus 2 ~~w~~L~~~vr~g~~~~~~~~~g~~~~e~~~~~~~---~~~~f~~~m~~~~~-~~~~~~~~~~~~~~~~~~vvDvGgG~G 77 (135)
.+|.+|++++++|+ + |+++.++|+ ..+.|.++|...+. .....+++.++ +++..+|||||||+|
T Consensus 135 ~~~~~L~~~l~~g~-~----------~~~~~~~p~~~~~~~~f~~~m~~~~~~~~~~~l~~~~~-~~~~~~vLDvG~G~G 202 (359)
T 1x19_A 135 DFYMGLSQAVRGQK-N----------FKGQVPYPPVTREDNLYFEEIHRSNAKFAIQLLLEEAK-LDGVKKMIDVGGGIG 202 (359)
T ss_dssp HTGGGHHHHHTTSC-C----------CCCSSCSSCCSHHHHHHHHHHHHTTCHHHHHHHHHHCC-CTTCCEEEEESCTTC
T ss_pred HHHHHHHHHHhcCC-C----------CcccccCchhhHHHHHHHHHHHHhccchhHHHHHHhcC-CCCCCEEEEECCccc
Confidence 46899999999987 3 788888999 99999999999988 77888999998 888899999999999
Q ss_pred HHHHHHHHHCCCCCeeEEeechHHHHhCCCC-------CCcEEEecCCCCC-CCCCcEEEecccC
Q 032721 78 DCLRMILQKHPFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS-IPAADAIFMKVHH 134 (135)
Q Consensus 78 ~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~-------~rv~~~~gd~~~~-~p~~D~~~l~~vl 134 (135)
.++..+++++|+++ ++++|+|.+++.++++ +|++++.+|+++. +|.+|+|+++++|
T Consensus 203 ~~~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl 266 (359)
T 1x19_A 203 DISAAMLKHFPELD-STILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRIL 266 (359)
T ss_dssp HHHHHHHHHCTTCE-EEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCSEEEEESCG
T ss_pred HHHHHHHHHCCCCe-EEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCCCEEEEechh
Confidence 99999999999999 9999999899887642 5799999999986 5667999999886
No 15
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.79 E-value=2e-19 Score=135.75 Aligned_cols=125 Identities=21% Similarity=0.375 Sum_probs=102.8
Q ss_pred CCchhhHHHHhhCCCCChhhhhhCCCcccccccCchHHHHHHHHHhccccccHHHHhccCCCCCC-cceEEeecCCCCHH
Q 032721 1 MSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKG-VKRLVDVGGSAGDC 79 (135)
Q Consensus 1 ~~~w~~L~~~vr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~-~~~vvDvGgG~G~~ 79 (135)
++.|.+|++++|+|++.+|+.. .++..+|+....|.++|...... ...+++.++ +.+ ..+|||||||+|.+
T Consensus 122 ~~~~~~l~~~l~~g~~~~f~~~------~~~~~~~~~~~~f~~~m~~~~~~-~~~~l~~~~-~~~~~~~vlDvG~G~G~~ 193 (352)
T 3mcz_A 122 WDNWPRLGEILRSEKPLAFQQE------SRFAHDTRARDAFNDAMVRLSQP-MVDVVSELG-VFARARTVIDLAGGHGTY 193 (352)
T ss_dssp TTTGGGHHHHHTCSSCCTTSHH------HHTTTCHHHHHHHHHHHHHHHHH-HHHHHHTCG-GGTTCCEEEEETCTTCHH
T ss_pred HHHHHHHHHHHhCCCCCCcccc------cccccCHHHHHHHHHHHHhhhhh-HHHHHHhCC-CcCCCCEEEEeCCCcCHH
Confidence 4679999999999985544433 22357899999999999984332 347888888 877 88999999999999
Q ss_pred HHHHHHHCCCCCeeEEeechHHHHhCCCC-------CCcEEEecCCCCC---CCC-CcEEEecccC
Q 032721 80 LRMILQKHPFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS---IPA-ADAIFMKVHH 134 (135)
Q Consensus 80 ~~~l~~~~p~l~~~~~~D~p~~~~~a~~~-------~rv~~~~gd~~~~---~p~-~D~~~l~~vl 134 (135)
+..+++++|+++ ++++|+|.+++.+++. +|++++.+|+++. .|. .|+|+++++|
T Consensus 194 ~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 194 LAQVLRRHPQLT-GQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp HHHHHHHCTTCE-EEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred HHHHHHhCCCCe-EEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 999999999999 9999999888877642 5799999999987 344 5999999986
No 16
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.78 E-value=3.4e-19 Score=133.44 Aligned_cols=124 Identities=15% Similarity=0.085 Sum_probs=108.6
Q ss_pred CchhhHHHHhhCCCCChhhhhhCCCcccccccCchHHHHHHHHHhccccccHHHHhccCCCC--CCcceEEeecCCCCHH
Q 032721 2 SAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGF--KGVKRLVDVGGSAGDC 79 (135)
Q Consensus 2 ~~w~~L~~~vr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~--~~~~~vvDvGgG~G~~ 79 (135)
..|.+|.+++++|+ ++|+ + |+++.++++....|.++|..........+++.++ + .+..+|+|||||+|.+
T Consensus 108 ~~~~~l~~~l~~~~-~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~vlDvG~G~G~~ 179 (335)
T 2r3s_A 108 NGFNDLTAAVLKGG-TAIS-----S-EGTLSPEHPVWVQFAKAMSPMMANPAQLIAQLVN-ENKIEPLKVLDISASHGLF 179 (335)
T ss_dssp GGGTTHHHHHHHTS-CCST-----T-TGGGSTTCTHHHHHHHHSGGGGHHHHHHHHHHHT-C--CCCSEEEEETCTTCHH
T ss_pred HHHHhHHHHHhcCC-CCCC-----C-cccccCCHHHHHHHHHHHHHHHhhhHHHHHHhcc-cccCCCCEEEEECCCcCHH
Confidence 46999999999998 6665 3 8888899999999999999988877778888887 7 7778999999999999
Q ss_pred HHHHHHHCCCCCeeEEeechHHHHhCCCC-------CCcEEEecCCCCC-CCC-CcEEEecccC
Q 032721 80 LRMILQKHPFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS-IPA-ADAIFMKVHH 134 (135)
Q Consensus 80 ~~~l~~~~p~l~~~~~~D~p~~~~~a~~~-------~rv~~~~gd~~~~-~p~-~D~~~l~~vl 134 (135)
+..+++++|+.+ ++++|++.+++.+++. ++++++.+|+++. +|. .|+|+++++|
T Consensus 180 ~~~l~~~~p~~~-~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l 242 (335)
T 2r3s_A 180 GIAVAQHNPNAE-IFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFL 242 (335)
T ss_dssp HHHHHHHCTTCE-EEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCG
T ss_pred HHHHHHHCCCCe-EEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchh
Confidence 999999999999 9999999888887653 4799999999874 665 5999999886
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.18 E-value=2.9e-11 Score=88.28 Aligned_cols=77 Identities=17% Similarity=0.204 Sum_probs=60.2
Q ss_pred HHhccCCCCCCcceEEeecCCCCHHHHHHHHHC--CCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCC-CC
Q 032721 55 SVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKH--PFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IP 123 (135)
Q Consensus 55 ~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~--p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~-~p 123 (135)
.+++.+ .++..+|+|||||+|.++..++++. |+++ ++++|+ |.+++.|++. .+|+++.+|+.+- .+
T Consensus 62 ~l~~~~--~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~-v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~ 138 (261)
T 4gek_A 62 MLAERF--VQPGTQVYDLGCSLGAATLSVRRNIHHDNCK-IIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE 138 (261)
T ss_dssp HHHHHH--CCTTCEEEEETCTTTHHHHHHHHTCCSSSCE-EEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC
T ss_pred HHHHHh--CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCE-EEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc
Confidence 344443 3455799999999999999999986 5677 999999 9999988642 5899999999653 44
Q ss_pred CCcEEEecccC
Q 032721 124 AADAIFMKVHH 134 (135)
Q Consensus 124 ~~D~~~l~~vl 134 (135)
..|++++..+|
T Consensus 139 ~~d~v~~~~~l 149 (261)
T 4gek_A 139 NASMVVLNFTL 149 (261)
T ss_dssp SEEEEEEESCG
T ss_pred ccccceeeeee
Confidence 56999887664
No 18
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.12 E-value=3.3e-11 Score=84.83 Aligned_cols=75 Identities=13% Similarity=0.133 Sum_probs=59.4
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCC-CCC-
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPA- 124 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~-~p~- 124 (135)
...+++.++ ...+|+|||||+|.++..+++..| + ++++|+ |.+++.++++ .+++++.+|+.+. +|.
T Consensus 29 ~~~l~~~~~---~~~~vLDlG~G~G~~~~~l~~~~~--~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 102 (227)
T 1ve3_A 29 EPLLMKYMK---KRGKVLDLACGVGGFSFLLEDYGF--E-VVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDK 102 (227)
T ss_dssp HHHHHHSCC---SCCEEEEETCTTSHHHHHHHHTTC--E-EEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTT
T ss_pred HHHHHHhcC---CCCeEEEEeccCCHHHHHHHHcCC--E-EEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCC
Confidence 344444443 357999999999999999999887 6 999999 8899887653 6899999999773 443
Q ss_pred -CcEEEeccc
Q 032721 125 -ADAIFMKVH 133 (135)
Q Consensus 125 -~D~~~l~~v 133 (135)
.|++++..+
T Consensus 103 ~~D~v~~~~~ 112 (227)
T 1ve3_A 103 TFDYVIFIDS 112 (227)
T ss_dssp CEEEEEEESC
T ss_pred cEEEEEEcCc
Confidence 499998876
No 19
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.11 E-value=1.9e-10 Score=81.56 Aligned_cols=80 Identities=15% Similarity=0.083 Sum_probs=62.7
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----CCcEEEecCCCCC-CCC-Cc
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS-IPA-AD 126 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----~rv~~~~gd~~~~-~p~-~D 126 (135)
..+++.+....+..+|||||||+|.++..+++.+|..+ ++++|+ +.+++.+++. .+++++.+|+.+. .+. .|
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD 111 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEAT-FTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYD 111 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCE-EEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCce
Confidence 33444443123458999999999999999999999999 999999 8888877643 4899999999764 333 49
Q ss_pred EEEecccC
Q 032721 127 AIFMKVHH 134 (135)
Q Consensus 127 ~~~l~~vl 134 (135)
++++..+|
T Consensus 112 ~v~~~~~l 119 (234)
T 3dtn_A 112 MVVSALSI 119 (234)
T ss_dssp EEEEESCG
T ss_pred EEEEeCcc
Confidence 99998765
No 20
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.08 E-value=5.1e-10 Score=80.99 Aligned_cols=78 Identities=12% Similarity=0.153 Sum_probs=63.7
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC-CCC--CcEE
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-IPA--ADAI 128 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-~p~--~D~~ 128 (135)
...+++.++ ..+..+|||||||+|.++..+++ |..+ ++++|+ |.+++.++...+++++.+|+.+. +|. .|++
T Consensus 23 ~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~--~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 23 VNAIINLLN-LPKGSVIADIGAGTGGYSVALAN--QGLF-VYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp HHHHHHHHC-CCTTCEEEEETCTTSHHHHHHHT--TTCE-EEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEE
T ss_pred HHHHHHHhC-CCCCCEEEEEcCcccHHHHHHHh--CCCE-EEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEE
Confidence 344555555 55668999999999999999997 6777 999999 99999998878999999999653 443 4999
Q ss_pred EecccC
Q 032721 129 FMKVHH 134 (135)
Q Consensus 129 ~l~~vl 134 (135)
++.+++
T Consensus 99 ~~~~~l 104 (261)
T 3ege_A 99 ISILAI 104 (261)
T ss_dssp EEESCG
T ss_pred EEcchH
Confidence 998875
No 21
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.05 E-value=5.9e-10 Score=77.79 Aligned_cols=78 Identities=19% Similarity=0.161 Sum_probs=61.3
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC--CCcEEEecCCCCCCCC--CcEE
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI--PGVTHIGGDMFKSIPA--ADAI 128 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~--~rv~~~~gd~~~~~p~--~D~~ 128 (135)
..+++.+.......+|+|||||+|.++..+++. ..+ ++++|+ +.+++.+++. ++++++.+|+.+..+. .|++
T Consensus 35 ~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v 111 (218)
T 3ou2_A 35 PAALERLRAGNIRGDVLELASGTGYWTRHLSGL--ADR-VTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAV 111 (218)
T ss_dssp HHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH--SSE-EEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEE
T ss_pred HHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc--CCe-EEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEE
Confidence 344444432445579999999999999999998 456 999999 8899888753 6899999999776443 3999
Q ss_pred EecccC
Q 032721 129 FMKVHH 134 (135)
Q Consensus 129 ~l~~vl 134 (135)
++.++|
T Consensus 112 ~~~~~l 117 (218)
T 3ou2_A 112 FFAHWL 117 (218)
T ss_dssp EEESCG
T ss_pred EEechh
Confidence 998765
No 22
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.04 E-value=6.3e-10 Score=77.53 Aligned_cols=78 Identities=12% Similarity=0.075 Sum_probs=64.4
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCC---
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIP--- 123 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p--- 123 (135)
..+++.++ ..+..+|+|||||+|.++..+++..|..+ ++++|+ |.+++.++++ ++++++.+|+.+.++
T Consensus 30 ~~~l~~l~-~~~~~~vLDiG~G~G~~~~~la~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 107 (204)
T 3e05_A 30 AVTLSKLR-LQDDLVMWDIGAGSASVSIEASNLMPNGR-IFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLP 107 (204)
T ss_dssp HHHHHHTT-CCTTCEEEEETCTTCHHHHHHHHHCTTSE-EEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSC
T ss_pred HHHHHHcC-CCCCCEEEEECCCCCHHHHHHHHHCCCCE-EEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCC
Confidence 34556665 66668999999999999999999999988 999999 9999888753 689999999977644
Q ss_pred CCcEEEeccc
Q 032721 124 AADAIFMKVH 133 (135)
Q Consensus 124 ~~D~~~l~~v 133 (135)
..|++++...
T Consensus 108 ~~D~i~~~~~ 117 (204)
T 3e05_A 108 DPDRVFIGGS 117 (204)
T ss_dssp CCSEEEESCC
T ss_pred CCCEEEECCC
Confidence 3599988754
No 23
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.04 E-value=4.6e-10 Score=80.48 Aligned_cols=79 Identities=16% Similarity=0.229 Sum_probs=64.6
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-CCcEEEecCCCCCCCC--CcEEE
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKSIPA--ADAIF 129 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-~rv~~~~gd~~~~~p~--~D~~~ 129 (135)
..+++.++ ..+..+|+|||||+|.++..+++.+|..+ ++++|+ +.+++.+++. ++++++.+|+.+..+. .|+++
T Consensus 23 ~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~ 100 (259)
T 2p35_A 23 RDLLAQVP-LERVLNGYDLGCGPGNSTELLTDRYGVNV-ITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLY 100 (259)
T ss_dssp HHHHTTCC-CSCCSSEEEETCTTTHHHHHHHHHHCTTS-EEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEE
T ss_pred HHHHHhcC-CCCCCEEEEecCcCCHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEE
Confidence 34666665 55668999999999999999999999999 999999 8999888754 7899999999653333 39999
Q ss_pred ecccC
Q 032721 130 MKVHH 134 (135)
Q Consensus 130 l~~vl 134 (135)
+.+++
T Consensus 101 ~~~~l 105 (259)
T 2p35_A 101 ANAVF 105 (259)
T ss_dssp EESCG
T ss_pred EeCch
Confidence 88765
No 24
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.03 E-value=3e-10 Score=87.83 Aligned_cols=81 Identities=15% Similarity=0.201 Sum_probs=64.0
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC---------------CCCcEEEec
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS---------------IPGVTHIGG 116 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~---------------~~rv~~~~g 116 (135)
...+++.++ ..+..+|+|||||+|.++..++...+.-+ ++++|+ |.+++.|++ ..+|+++.|
T Consensus 162 i~~il~~l~-l~~gd~VLDLGCGtG~l~l~lA~~~g~~k-VvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G 239 (438)
T 3uwp_A 162 VAQMIDEIK-MTDDDLFVDLGSGVGQVVLQVAAATNCKH-HYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG 239 (438)
T ss_dssp HHHHHHHHC-CCTTCEEEEESCTTSHHHHHHHHHCCCSE-EEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHHCCCCE-EEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence 345555555 66678999999999999999999888767 999999 777776653 268999999
Q ss_pred CCCCC-C----CCCcEEEecccCC
Q 032721 117 DMFKS-I----PAADAIFMKVHHF 135 (135)
Q Consensus 117 d~~~~-~----p~~D~~~l~~vl~ 135 (135)
|+++. + +.+|++++.+++|
T Consensus 240 D~~~lp~~d~~~~aDVVf~Nn~~F 263 (438)
T 3uwp_A 240 DFLSEEWRERIANTSVIFVNNFAF 263 (438)
T ss_dssp CTTSHHHHHHHHTCSEEEECCTTC
T ss_pred cccCCccccccCCccEEEEccccc
Confidence 99874 3 2479999887654
No 25
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.02 E-value=8.1e-10 Score=80.44 Aligned_cols=66 Identities=17% Similarity=0.097 Sum_probs=56.4
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC-CCCC--cEEEecccC
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-IPAA--DAIFMKVHH 134 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-~p~~--D~~~l~~vl 134 (135)
..+|||||||+|.++..+++... + ++++|+ +.+++.|++.++++++.+|+.+- +|.. |+|++..++
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~~~--~-v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~ 109 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEFFE--R-VHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAM 109 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTTCS--E-EEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCC
T ss_pred CCCEEEEcCCCCHHHHHHHHhCC--E-EEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeeh
Confidence 46899999999999999998763 5 999999 99999999989999999998543 5543 999998765
No 26
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.01 E-value=4e-10 Score=81.17 Aligned_cols=86 Identities=14% Similarity=0.176 Sum_probs=64.1
Q ss_pred HhccccccHHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecC
Q 032721 45 MSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGD 117 (135)
Q Consensus 45 m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd 117 (135)
....+......+++.++ ..+..+|||||||+|.++..+++..+ + ++++|+ +.+++.+++. ++++++.+|
T Consensus 18 ~~~~~~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~-v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d 93 (260)
T 1vl5_A 18 QIHAKGSDLAKLMQIAA-LKGNEEVLDVATGGGHVANAFAPFVK--K-VVAFDLTEDILKVARAFIEGNGHQQVEYVQGD 93 (260)
T ss_dssp -----CCCHHHHHHHHT-CCSCCEEEEETCTTCHHHHHHGGGSS--E-EEEEESCHHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred ccccCHHHHHHHHHHhC-CCCCCEEEEEeCCCCHHHHHHHHhCC--E-EEEEeCCHHHHHHHHHHHHhcCCCceEEEEec
Confidence 33334445566777776 66678999999999999999999876 6 999999 8899887642 579999999
Q ss_pred CCCC-CCC--CcEEEecccC
Q 032721 118 MFKS-IPA--ADAIFMKVHH 134 (135)
Q Consensus 118 ~~~~-~p~--~D~~~l~~vl 134 (135)
+.+. +|. .|++++..+|
T Consensus 94 ~~~l~~~~~~fD~V~~~~~l 113 (260)
T 1vl5_A 94 AEQMPFTDERFHIVTCRIAA 113 (260)
T ss_dssp C-CCCSCTTCEEEEEEESCG
T ss_pred HHhCCCCCCCEEEEEEhhhh
Confidence 9653 443 3999988765
No 27
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.01 E-value=8e-10 Score=79.32 Aligned_cols=79 Identities=16% Similarity=0.254 Sum_probs=64.3
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----CCcEEEecCCCCC-CCC--
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS-IPA-- 124 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----~rv~~~~gd~~~~-~p~-- 124 (135)
...+++.++ ..+..+|||||||+|.++..+++++ ..+ ++++|+ +.+++.+++. ++++++.+|+.+. +|.
T Consensus 44 ~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~-~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~ 120 (266)
T 3ujc_A 44 TKKILSDIE-LNENSKVLDIGSGLGGGCMYINEKY-GAH-THGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENN 120 (266)
T ss_dssp HHHHTTTCC-CCTTCEEEEETCTTSHHHHHHHHHH-CCE-EEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTC
T ss_pred HHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHHc-CCE-EEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCc
Confidence 455666665 6667899999999999999999987 667 999999 8888887653 6899999999764 443
Q ss_pred CcEEEecccC
Q 032721 125 ADAIFMKVHH 134 (135)
Q Consensus 125 ~D~~~l~~vl 134 (135)
.|++++.+++
T Consensus 121 fD~v~~~~~l 130 (266)
T 3ujc_A 121 FDLIYSRDAI 130 (266)
T ss_dssp EEEEEEESCG
T ss_pred EEEEeHHHHH
Confidence 3999998765
No 28
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.01 E-value=6e-10 Score=82.12 Aligned_cols=42 Identities=17% Similarity=0.193 Sum_probs=37.9
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS 107 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~ 107 (135)
...+|||||||+|.++..+++.+|..+ ++++|+ +.+++.|++
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~-v~gvDis~~~i~~A~~ 88 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSR-MVGLDIDSRLIHSARQ 88 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSE-EEEEESCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCE-EEEECCCHHHHHHHHH
Confidence 457999999999999999999999988 999999 888887753
No 29
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.00 E-value=9.1e-10 Score=81.63 Aligned_cols=88 Identities=13% Similarity=0.044 Sum_probs=66.0
Q ss_pred HhccccccHHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEec
Q 032721 45 MSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGG 116 (135)
Q Consensus 45 m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~g 116 (135)
+..........+++.++...+..+|||||||+|.++..+++++ ..+ ++++|+ +.+++.|+++ ++++++.+
T Consensus 97 ~~~~~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 174 (312)
T 3vc1_A 97 LHRLESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSR-VEGVTLSAAQADFGNRRARELRIDDHVRSRVC 174 (312)
T ss_dssp HHHHHHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred hhhHHHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCE-EEEEeCCHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 3333333345566666435556899999999999999999986 567 999999 8899887652 47999999
Q ss_pred CCCCC-CCC--CcEEEecccC
Q 032721 117 DMFKS-IPA--ADAIFMKVHH 134 (135)
Q Consensus 117 d~~~~-~p~--~D~~~l~~vl 134 (135)
|+.+. ++. .|+|++..++
T Consensus 175 d~~~~~~~~~~fD~V~~~~~l 195 (312)
T 3vc1_A 175 NMLDTPFDKGAVTASWNNEST 195 (312)
T ss_dssp CTTSCCCCTTCEEEEEEESCG
T ss_pred ChhcCCCCCCCEeEEEECCch
Confidence 99763 443 3999987765
No 30
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.99 E-value=9.1e-10 Score=76.69 Aligned_cols=92 Identities=14% Similarity=0.190 Sum_probs=68.1
Q ss_pred HHHHHHHhccccc----cHHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----
Q 032721 39 GLMRKAMSGVSVP----FMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----- 108 (135)
Q Consensus 39 ~~f~~~m~~~~~~----~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----- 108 (135)
..|.+........ ....+++.++ ..+. +|||||||+|.++..++++ |..+ ++++|+ +.+++.+++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~vLdiG~G~G~~~~~l~~~-~~~~-v~~~D~s~~~~~~a~~~~~~~~ 90 (219)
T 3dlc_A 15 KNMDEISKTLFAPIYPIIAENIINRFG-ITAG-TCIDIGSGPGALSIALAKQ-SDFS-IRALDFSKHMNEIALKNIADAN 90 (219)
T ss_dssp HHHHHHHHTTTTTHHHHHHHHHHHHHC-CCEE-EEEEETCTTSHHHHHHHHH-SEEE-EEEEESCHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHhhccccHHHHHHHHHhcC-CCCC-EEEEECCCCCHHHHHHHHc-CCCe-EEEEECCHHHHHHHHHHHHhcc
Confidence 4455554444333 2344555555 4444 9999999999999999998 7888 999999 8888887653
Q ss_pred --CCcEEEecCCCCC-CCC--CcEEEecccC
Q 032721 109 --PGVTHIGGDMFKS-IPA--ADAIFMKVHH 134 (135)
Q Consensus 109 --~rv~~~~gd~~~~-~p~--~D~~~l~~vl 134 (135)
++++++.+|+.+. ++. .|++++.+++
T Consensus 91 ~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l 121 (219)
T 3dlc_A 91 LNDRIQIVQGDVHNIPIEDNYADLIVSRGSV 121 (219)
T ss_dssp CTTTEEEEECBTTBCSSCTTCEEEEEEESCG
T ss_pred ccCceEEEEcCHHHCCCCcccccEEEECchH
Confidence 5899999999763 443 3999998765
No 31
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.99 E-value=2.6e-10 Score=81.72 Aligned_cols=67 Identities=10% Similarity=0.017 Sum_probs=57.9
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCCC---CcEEEecc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA---ADAIFMKV 132 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p~---~D~~~l~~ 132 (135)
+..+|+|||||+|.+++.+++..|..+ ++.+|+ |.+++.|+++ ++|++..+|.++.+|. .|++++..
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~-V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKS-AIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEE-EEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 347999999999999999999999888 999999 8999988754 5799999999988763 59887643
No 32
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.98 E-value=1.2e-09 Score=78.31 Aligned_cols=79 Identities=20% Similarity=0.214 Sum_probs=62.3
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCC-
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP- 123 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p- 123 (135)
...+++.++ ..+..+|||||||+|.++..+++.+ +.+ ++++|+ |.+++.+++. ++++++.+|+.+..+
T Consensus 25 ~~~l~~~~~-~~~~~~VLDiGcG~G~~~~~la~~~-~~~-v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 101 (256)
T 1nkv_A 25 YATLGRVLR-MKPGTRILDLGSGSGEMLCTWARDH-GIT-GTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVAN 101 (256)
T ss_dssp HHHHHHHTC-CCTTCEEEEETCTTCHHHHHHHHHT-CCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCS
T ss_pred HHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhc-CCe-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcC
Confidence 345666665 6666899999999999999999988 567 999999 8898887642 479999999976432
Q ss_pred C-CcEEEecccC
Q 032721 124 A-ADAIFMKVHH 134 (135)
Q Consensus 124 ~-~D~~~l~~vl 134 (135)
. .|++++..++
T Consensus 102 ~~fD~V~~~~~~ 113 (256)
T 1nkv_A 102 EKCDVAACVGAT 113 (256)
T ss_dssp SCEEEEEEESCG
T ss_pred CCCCEEEECCCh
Confidence 3 3999987654
No 33
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.98 E-value=6.5e-10 Score=81.17 Aligned_cols=76 Identities=14% Similarity=0.110 Sum_probs=58.1
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHH-CCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQK-HPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP 123 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~-~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p 123 (135)
...+++.++ ..+..+|+|+|||+|.++..+++. .|..+ ++++|+ +.+++.++++ ++++++.+|+.+.+|
T Consensus 99 ~~~~~~~~~-~~~~~~VLD~G~G~G~~~~~la~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~ 176 (275)
T 1yb2_A 99 ASYIIMRCG-LRPGMDILEVGVGSGNMSSYILYALNGKGT-LTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS 176 (275)
T ss_dssp -------CC-CCTTCEEEEECCTTSHHHHHHHHHHTTSSE-EEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC
T ss_pred HHHHHHHcC-CCCcCEEEEecCCCCHHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCc
Confidence 345666665 666789999999999999999998 78888 999999 8888876532 579999999988666
Q ss_pred C--CcEEEe
Q 032721 124 A--ADAIFM 130 (135)
Q Consensus 124 ~--~D~~~l 130 (135)
. .|++++
T Consensus 177 ~~~fD~Vi~ 185 (275)
T 1yb2_A 177 DQMYDAVIA 185 (275)
T ss_dssp SCCEEEEEE
T ss_pred CCCccEEEE
Confidence 4 499986
No 34
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.97 E-value=5.2e-10 Score=78.55 Aligned_cols=70 Identities=19% Similarity=0.211 Sum_probs=57.3
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----------CCcEEEecCCCCC-CC--CCcEE
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----------PGVTHIGGDMFKS-IP--AADAI 128 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----------~rv~~~~gd~~~~-~p--~~D~~ 128 (135)
.+..+|||||||+|.++..++++.|..+ ++++|+ +.+++.++++ .+++++.+|+... .+ ..|++
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 106 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQ-ITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAA 106 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSE-EEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCE-EEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEE
Confidence 3457999999999999999999998888 999999 8888887642 2899999998543 22 24999
Q ss_pred EecccC
Q 032721 129 FMKVHH 134 (135)
Q Consensus 129 ~l~~vl 134 (135)
++..+|
T Consensus 107 ~~~~~l 112 (217)
T 3jwh_A 107 TVIEVI 112 (217)
T ss_dssp EEESCG
T ss_pred eeHHHH
Confidence 988775
No 35
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.97 E-value=5.6e-10 Score=81.87 Aligned_cols=69 Identities=17% Similarity=0.309 Sum_probs=57.9
Q ss_pred CcceEEeecCCC---CHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----CCcEEEecCCCCC------------CC-
Q 032721 65 GVKRLVDVGGSA---GDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS------------IP- 123 (135)
Q Consensus 65 ~~~~vvDvGgG~---G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----~rv~~~~gd~~~~------------~p- 123 (135)
+..+|||||||+ |.++..+.+.+|+.+ ++.+|+ |.+++.|++. ++++++.+|+++. ++
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~-v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDAR-VVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCE-EEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCE-EEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 447999999999 999888888999999 999999 9999988642 6899999999762 22
Q ss_pred -CCcEEEecccC
Q 032721 124 -AADAIFMKVHH 134 (135)
Q Consensus 124 -~~D~~~l~~vl 134 (135)
..|++++..+|
T Consensus 156 ~~~d~v~~~~vl 167 (274)
T 2qe6_A 156 SRPAAIMLVGML 167 (274)
T ss_dssp TSCCEEEETTTG
T ss_pred CCCEEEEEechh
Confidence 35999988775
No 36
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.97 E-value=9.3e-10 Score=79.82 Aligned_cols=71 Identities=17% Similarity=0.280 Sum_probs=60.0
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC-CCC--CcEEEecc
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-IPA--ADAIFMKV 132 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~-~p~--~D~~~l~~ 132 (135)
+.+..+|||||||+|.++..+++.+|..+ ++++|+ +.+++.+++. ++++++.+|+.+. .+. .|+|++.+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 113 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAE-ITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCF 113 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEES
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEec
Confidence 55668999999999999999999999999 999999 8888887643 5799999999764 333 49999987
Q ss_pred cC
Q 032721 133 HH 134 (135)
Q Consensus 133 vl 134 (135)
+|
T Consensus 114 ~l 115 (276)
T 3mgg_A 114 VL 115 (276)
T ss_dssp CG
T ss_pred hh
Confidence 65
No 37
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.96 E-value=1.9e-09 Score=77.23 Aligned_cols=79 Identities=15% Similarity=0.133 Sum_probs=61.2
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCC-CCC
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IPA 124 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~-~p~ 124 (135)
..+++.+....+..+|||||||+|.++..+++..|. + ++++|+ +.+++.++++ .+++++.+|+.+. .+.
T Consensus 35 ~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (257)
T 3f4k_A 35 RKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKG-Q-ITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQN 112 (257)
T ss_dssp HHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCS-E-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCT
T ss_pred HHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCC-e-EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCC
Confidence 344454432555679999999999999999999986 7 999999 8888887642 4699999999543 333
Q ss_pred --CcEEEecccC
Q 032721 125 --ADAIFMKVHH 134 (135)
Q Consensus 125 --~D~~~l~~vl 134 (135)
.|++++..++
T Consensus 113 ~~fD~v~~~~~l 124 (257)
T 3f4k_A 113 EELDLIWSEGAI 124 (257)
T ss_dssp TCEEEEEEESCS
T ss_pred CCEEEEEecChH
Confidence 3999988765
No 38
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.96 E-value=5.6e-10 Score=78.26 Aligned_cols=80 Identities=25% Similarity=0.230 Sum_probs=65.0
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC-CC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-IP 123 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~-~p 123 (135)
...+++.++ ..+..+|+|||||+|.++..+++.. |..+ ++++|+ +.+++.+++. ++++++.+|+.+. ++
T Consensus 26 ~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~ 103 (219)
T 3dh0_A 26 PEKVLKEFG-LKEGMTVLDVGTGAGFYLPYLSKMVGEKGK-VYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLP 103 (219)
T ss_dssp HHHHHHHHT-CCTTCEEEESSCTTCTTHHHHHHHHTTTCE-EEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSC
T ss_pred HHHHHHHhC-CCCCCEEEEEecCCCHHHHHHHHHhCCCcE-EEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCC
Confidence 345666665 6667899999999999999999997 7778 999999 8899888653 5799999999664 44
Q ss_pred C--CcEEEecccC
Q 032721 124 A--ADAIFMKVHH 134 (135)
Q Consensus 124 ~--~D~~~l~~vl 134 (135)
. .|++++..++
T Consensus 104 ~~~fD~v~~~~~l 116 (219)
T 3dh0_A 104 DNTVDFIFMAFTF 116 (219)
T ss_dssp SSCEEEEEEESCG
T ss_pred CCCeeEEEeehhh
Confidence 4 3999988765
No 39
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.96 E-value=8.1e-10 Score=80.89 Aligned_cols=71 Identities=17% Similarity=0.130 Sum_probs=58.8
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCC-CCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCC-CCC-CcEEEeccc
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPF-ICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPA-ADAIFMKVH 133 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~-l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~-~p~-~D~~~l~~v 133 (135)
..+..+|||||||+|.++..+++.+|. .+ ++++|+ |.+++.+++. .+++++.+|+.+. .+. .|++++..+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 98 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSK-YTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICHAF 98 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCE-EEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEEESC
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEECCh
Confidence 556689999999999999999999995 77 999999 8888877643 3799999999764 333 499999876
Q ss_pred C
Q 032721 134 H 134 (135)
Q Consensus 134 l 134 (135)
+
T Consensus 99 l 99 (284)
T 3gu3_A 99 L 99 (284)
T ss_dssp G
T ss_pred h
Confidence 5
No 40
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.95 E-value=3.7e-10 Score=79.35 Aligned_cols=70 Identities=17% Similarity=0.224 Sum_probs=57.5
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----------CCcEEEecCCCCC-CC--CCcEE
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----------PGVTHIGGDMFKS-IP--AADAI 128 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----------~rv~~~~gd~~~~-~p--~~D~~ 128 (135)
.+..+|||||||+|.++..+++..|..+ ++++|+ +.+++.+++. .+++++.+|+... .+ ..|++
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V 106 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQ-ITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAA 106 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCE-EEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCE-EEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEE
Confidence 3447999999999999999999999888 999999 8899888653 2899999999443 22 24999
Q ss_pred EecccC
Q 032721 129 FMKVHH 134 (135)
Q Consensus 129 ~l~~vl 134 (135)
++..+|
T Consensus 107 ~~~~~l 112 (219)
T 3jwg_A 107 TVIEVI 112 (219)
T ss_dssp EEESCG
T ss_pred EEHHHH
Confidence 988775
No 41
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.95 E-value=1.7e-09 Score=78.27 Aligned_cols=78 Identities=17% Similarity=0.094 Sum_probs=60.8
Q ss_pred HHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCC-CCC-
Q 032721 55 SVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IPA- 124 (135)
Q Consensus 55 ~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~-~p~- 124 (135)
.+++.++...+..+|||||||+|.++..+++. |..+ ++++|+ |.+++.+++. ++++++.+|+.+. ++.
T Consensus 36 ~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 113 (267)
T 3kkz_A 36 KALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQ-VTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNE 113 (267)
T ss_dssp HHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred HHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCE-EEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCC
Confidence 34444432455689999999999999999998 7778 999999 8888887643 5799999999653 333
Q ss_pred -CcEEEecccC
Q 032721 125 -ADAIFMKVHH 134 (135)
Q Consensus 125 -~D~~~l~~vl 134 (135)
.|++++..++
T Consensus 114 ~fD~i~~~~~~ 124 (267)
T 3kkz_A 114 ELDLIWSEGAI 124 (267)
T ss_dssp CEEEEEESSCG
T ss_pred CEEEEEEcCCc
Confidence 3999988765
No 42
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.95 E-value=2.9e-10 Score=81.68 Aligned_cols=77 Identities=13% Similarity=0.135 Sum_probs=63.8
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHH-CCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQK-HPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP 123 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~-~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p 123 (135)
...++...+ ..+..+|+|+|||+|.++..+++. .|..+ ++++|+ |.+++.|+++ .+++++.+|+.+.+|
T Consensus 82 ~~~i~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 159 (255)
T 3mb5_A 82 AALIVAYAG-ISPGDFIVEAGVGSGALTLFLANIVGPEGR-VVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIE 159 (255)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSE-EEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCC
T ss_pred HHHHHHhhC-CCCCCEEEEecCCchHHHHHHHHHhCCCeE-EEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccC
Confidence 445666666 666789999999999999999999 88888 999999 8899888753 459999999987766
Q ss_pred C--CcEEEec
Q 032721 124 A--ADAIFMK 131 (135)
Q Consensus 124 ~--~D~~~l~ 131 (135)
. .|++++.
T Consensus 160 ~~~~D~v~~~ 169 (255)
T 3mb5_A 160 EENVDHVILD 169 (255)
T ss_dssp CCSEEEEEEC
T ss_pred CCCcCEEEEC
Confidence 5 4998863
No 43
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.95 E-value=1.8e-09 Score=76.94 Aligned_cols=76 Identities=20% Similarity=0.359 Sum_probs=58.8
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCC---CCCC--CcE
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFK---SIPA--ADA 127 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~---~~p~--~D~ 127 (135)
..+...++.+.+..+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++. ++++.+|..+ ++|. .|+
T Consensus 30 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~-v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~ 104 (240)
T 3dli_A 30 ARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEE--GIE-SIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDG 104 (240)
T ss_dssp HHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHH--TCC-EEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSE
T ss_pred HHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhC--CCc-EEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeE
Confidence 334444432345589999999999999999997 557 999999 8999988765 8999999865 4453 499
Q ss_pred EEecccC
Q 032721 128 IFMKVHH 134 (135)
Q Consensus 128 ~~l~~vl 134 (135)
+++.++|
T Consensus 105 i~~~~~l 111 (240)
T 3dli_A 105 VMISHFV 111 (240)
T ss_dssp EEEESCG
T ss_pred EEECCch
Confidence 9998775
No 44
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.94 E-value=7.8e-10 Score=80.07 Aligned_cols=67 Identities=13% Similarity=0.132 Sum_probs=57.6
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCCC---CcEEEecc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA---ADAIFMKV 132 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p~---~D~~~l~~ 132 (135)
+..+|+|||||+|.+++.+++..|..+ ++.+|+ |.+++.|+++ ++|++..+|.++.++. .|++++..
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~-V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASF-AIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEE-EEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 447999999999999999999998888 999999 8999988754 5799999999988552 59988654
No 45
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.94 E-value=1.4e-09 Score=77.87 Aligned_cols=77 Identities=14% Similarity=0.058 Sum_probs=61.0
Q ss_pred HHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC---CCcEEEecCCCCC-CCC--CcE
Q 032721 55 SVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI---PGVTHIGGDMFKS-IPA--ADA 127 (135)
Q Consensus 55 ~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~---~rv~~~~gd~~~~-~p~--~D~ 127 (135)
.+.+.++ ..+..+|||||||+|.++..+++..+. + ++++|+ +.+++.+++. .+++++.+|+.+. .+. .|+
T Consensus 35 ~l~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~~~~-~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 111 (253)
T 3g5l_A 35 ELKKMLP-DFNQKTVLDLGCGFGWHCIYAAEHGAK-K-VLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNV 111 (253)
T ss_dssp HHHTTCC-CCTTCEEEEETCTTCHHHHHHHHTTCS-E-EEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEE
T ss_pred HHHHhhh-ccCCCEEEEECCCCCHHHHHHHHcCCC-E-EEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEE
Confidence 4555555 445689999999999999999998765 6 999999 8898887653 6899999999653 333 399
Q ss_pred EEecccC
Q 032721 128 IFMKVHH 134 (135)
Q Consensus 128 ~~l~~vl 134 (135)
+++.++|
T Consensus 112 v~~~~~l 118 (253)
T 3g5l_A 112 VLSSLAL 118 (253)
T ss_dssp EEEESCG
T ss_pred EEEchhh
Confidence 9998875
No 46
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.94 E-value=5.2e-10 Score=80.35 Aligned_cols=68 Identities=16% Similarity=0.032 Sum_probs=58.2
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCCC---CcEEEeccc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA---ADAIFMKVH 133 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p~---~D~~~l~~v 133 (135)
+..+|+|||||+|.+++.+++..|..+ ++.+|+ |.+++.|+++ ++|++..+|.++.++. .|++++..+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~-V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDF-AIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEE-EEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 447999999999999999999998888 999999 9999988754 5799999999988543 599886543
No 47
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.94 E-value=7.3e-10 Score=75.13 Aligned_cols=77 Identities=18% Similarity=0.232 Sum_probs=60.4
Q ss_pred HHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------C-CcEEEecCCCCCCCC--
Q 032721 55 SVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------P-GVTHIGGDMFKSIPA-- 124 (135)
Q Consensus 55 ~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~-rv~~~~gd~~~~~p~-- 124 (135)
.+++.++ ..+..+|+|+|||+|.++..+++.+|..+ ++++|+ +.+++.++++ + ++ ++.+|..+.+|.
T Consensus 16 ~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~ 92 (178)
T 3hm2_A 16 LAISALA-PKPHETLWDIGGGSGSIAIEWLRSTPQTT-AVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVP 92 (178)
T ss_dssp HHHHHHC-CCTTEEEEEESTTTTHHHHHHHTTSSSEE-EEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCC
T ss_pred HHHHHhc-ccCCCeEEEeCCCCCHHHHHHHHHCCCCe-EEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccC
Confidence 3444554 55667999999999999999999999988 999999 8888887642 3 78 888998766542
Q ss_pred --CcEEEecccC
Q 032721 125 --ADAIFMKVHH 134 (135)
Q Consensus 125 --~D~~~l~~vl 134 (135)
.|++++...+
T Consensus 93 ~~~D~i~~~~~~ 104 (178)
T 3hm2_A 93 DNPDVIFIGGGL 104 (178)
T ss_dssp SCCSEEEECC-T
T ss_pred CCCCEEEECCcc
Confidence 4999987654
No 48
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.94 E-value=2.6e-09 Score=78.54 Aligned_cols=70 Identities=24% Similarity=0.155 Sum_probs=58.1
Q ss_pred CCcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec-hHHHHhCCC--------CCCcEEEecCCCCC-CCC--------
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDL-PEVVAEAPS--------IPGVTHIGGDMFKS-IPA-------- 124 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~-p~~~~~a~~--------~~rv~~~~gd~~~~-~p~-------- 124 (135)
.+..+|||||||+|.++..+++++ +..+ ++++|+ |.+++.|++ .++++++.+|+.+. .+.
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQ-IIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSE-EEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCE-EEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 456899999999999999999987 7778 999999 889988764 36899999999763 332
Q ss_pred CcEEEecccC
Q 032721 125 ADAIFMKVHH 134 (135)
Q Consensus 125 ~D~~~l~~vl 134 (135)
.|++++..++
T Consensus 114 fD~V~~~~~l 123 (299)
T 3g5t_A 114 IDMITAVECA 123 (299)
T ss_dssp EEEEEEESCG
T ss_pred eeEEeHhhHH
Confidence 3999988765
No 49
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.93 E-value=1.8e-09 Score=78.13 Aligned_cols=78 Identities=17% Similarity=0.144 Sum_probs=62.5
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCC-CCC
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IPA 124 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~-~p~ 124 (135)
..+++.++ ..+..+|||||||+|.++..+++++ ..+ ++++|+ +.+++.+++. ++++++.+|+.+. +|.
T Consensus 51 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 127 (273)
T 3bus_A 51 DEMIALLD-VRSGDRVLDVGCGIGKPAVRLATAR-DVR-VTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFED 127 (273)
T ss_dssp HHHHHHSC-CCTTCEEEEESCTTSHHHHHHHHHS-CCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCT
T ss_pred HHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHhc-CCE-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCC
Confidence 45666666 6667899999999999999999987 567 999999 8888877542 4799999999763 443
Q ss_pred --CcEEEecccC
Q 032721 125 --ADAIFMKVHH 134 (135)
Q Consensus 125 --~D~~~l~~vl 134 (135)
.|++++..++
T Consensus 128 ~~fD~v~~~~~l 139 (273)
T 3bus_A 128 ASFDAVWALESL 139 (273)
T ss_dssp TCEEEEEEESCT
T ss_pred CCccEEEEechh
Confidence 3999988765
No 50
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.92 E-value=1.3e-09 Score=79.38 Aligned_cols=80 Identities=16% Similarity=0.139 Sum_probs=63.5
Q ss_pred ccHHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-CCcEEEecCCCCC-CCC-Cc
Q 032721 51 PFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS-IPA-AD 126 (135)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-~rv~~~~gd~~~~-~p~-~D 126 (135)
.....+++.++ ..+..+|+|||||+|.++..+++ |..+ ++++|+ |.+++.+++. ++++++.+|+.+. .+. .|
T Consensus 44 ~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~--~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD 119 (279)
T 3ccf_A 44 QYGEDLLQLLN-PQPGEFILDLGCGTGQLTEKIAQ--SGAE-VLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLD 119 (279)
T ss_dssp SSCCHHHHHHC-CCTTCEEEEETCTTSHHHHHHHH--TTCE-EEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEE
T ss_pred HHHHHHHHHhC-CCCCCEEEEecCCCCHHHHHHHh--CCCe-EEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcC
Confidence 34455666665 55668999999999999999998 6778 999999 8999888754 7899999999653 333 39
Q ss_pred EEEecccC
Q 032721 127 AIFMKVHH 134 (135)
Q Consensus 127 ~~~l~~vl 134 (135)
++++.+++
T Consensus 120 ~v~~~~~l 127 (279)
T 3ccf_A 120 AVFSNAML 127 (279)
T ss_dssp EEEEESCG
T ss_pred EEEEcchh
Confidence 99998775
No 51
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.92 E-value=2.4e-09 Score=75.96 Aligned_cols=97 Identities=19% Similarity=0.180 Sum_probs=60.9
Q ss_pred chHHHHHHHHHhcccc----ccHHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-
Q 032721 35 PEMNGLMRKAMSGVSV----PFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI- 108 (135)
Q Consensus 35 ~~~~~~f~~~m~~~~~----~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~- 108 (135)
++....|...+..... .....+.+.++ ..+..+|+|||||+|.++..+++... .+ ++++|+ +.+++.+++.
T Consensus 10 ~~~~~~y~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~-~~-v~~vD~s~~~~~~a~~~~ 86 (243)
T 3bkw_A 10 PDFFAGYSQLGRSIEGLDGAAEWPALRAMLP-EVGGLRIVDLGCGFGWFCRWAHEHGA-SY-VLGLDLSEKMLARARAAG 86 (243)
T ss_dssp ---------------CGGGCTTHHHHHHHSC-CCTTCEEEEETCTTCHHHHHHHHTTC-SE-EEEEESCHHHHHHHHHTS
T ss_pred HHHHHHHHHhccCCccHHHHHhHHHHHHhcc-ccCCCEEEEEcCcCCHHHHHHHHCCC-Ce-EEEEcCCHHHHHHHHHhc
Confidence 3344455554443332 12234555555 44567999999999999999998733 26 999999 8899888654
Q ss_pred --CCcEEEecCCCCC-CCC--CcEEEecccC
Q 032721 109 --PGVTHIGGDMFKS-IPA--ADAIFMKVHH 134 (135)
Q Consensus 109 --~rv~~~~gd~~~~-~p~--~D~~~l~~vl 134 (135)
.+++++.+|+.+. ++. .|++++.++|
T Consensus 87 ~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 117 (243)
T 3bkw_A 87 PDTGITYERADLDKLHLPQDSFDLAYSSLAL 117 (243)
T ss_dssp CSSSEEEEECCGGGCCCCTTCEEEEEEESCG
T ss_pred ccCCceEEEcChhhccCCCCCceEEEEeccc
Confidence 4799999999664 433 3999988765
No 52
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.91 E-value=4e-10 Score=80.33 Aligned_cols=79 Identities=23% Similarity=0.218 Sum_probs=62.5
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCCC-
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPA- 124 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p~- 124 (135)
...+++.++ ..+..+|+|||||+|.++..+++..| .+ ++++|+ +.+++.++++ ++++++.+|+..++|.
T Consensus 80 ~~~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~~~-~~-v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (235)
T 1jg1_A 80 VAIMLEIAN-LKPGMNILEVGTGSGWNAALISEIVK-TD-VYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPK 156 (235)
T ss_dssp HHHHHHHHT-CCTTCCEEEECCTTSHHHHHHHHHHC-SC-EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHhC-CE-EEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCC
Confidence 345555565 66667999999999999999999998 77 999998 8888887653 4699999998555553
Q ss_pred --CcEEEecccC
Q 032721 125 --ADAIFMKVHH 134 (135)
Q Consensus 125 --~D~~~l~~vl 134 (135)
.|++++...+
T Consensus 157 ~~fD~Ii~~~~~ 168 (235)
T 1jg1_A 157 APYDVIIVTAGA 168 (235)
T ss_dssp CCEEEEEECSBB
T ss_pred CCccEEEECCcH
Confidence 3999987653
No 53
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.90 E-value=1.9e-09 Score=79.42 Aligned_cols=77 Identities=16% Similarity=0.119 Sum_probs=62.5
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCCC-
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA- 124 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p~- 124 (135)
..+++.++ ..+..+|||||||+|.++..++++++ .+ ++++|+ +.+++.+++. ++++++.+|+.+ ++.
T Consensus 62 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~-~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~ 137 (302)
T 3hem_A 62 KLALDKLN-LEPGMTLLDIGCGWGSTMRHAVAEYD-VN-VIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE-FDEP 137 (302)
T ss_dssp HHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHHC-CE-EEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG-CCCC
T ss_pred HHHHHHcC-CCCcCEEEEeeccCcHHHHHHHHhCC-CE-EEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH-cCCC
Confidence 34666665 66678999999999999999999987 67 999999 8899887643 489999999955 354
Q ss_pred CcEEEecccC
Q 032721 125 ADAIFMKVHH 134 (135)
Q Consensus 125 ~D~~~l~~vl 134 (135)
.|++++..++
T Consensus 138 fD~v~~~~~~ 147 (302)
T 3hem_A 138 VDRIVSLGAF 147 (302)
T ss_dssp CSEEEEESCG
T ss_pred ccEEEEcchH
Confidence 4999987664
No 54
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.88 E-value=3.5e-09 Score=72.13 Aligned_cols=60 Identities=20% Similarity=0.313 Sum_probs=51.8
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCCCCC--CcEEEecc
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPA--ADAIFMKV 132 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~~p~--~D~~~l~~ 132 (135)
..+|+|+|||+|.++..++++. + ++++|+ +.+++. ..+++++.+|++++++. .|++++..
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~---~-v~gvD~s~~~~~~---~~~~~~~~~d~~~~~~~~~fD~i~~n~ 86 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN---T-VVSTDLNIRALES---HRGGNLVRADLLCSINQESVDVVVFNP 86 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS---E-EEEEESCHHHHHT---CSSSCEEECSTTTTBCGGGCSEEEECC
T ss_pred CCeEEEeccCccHHHHHHHhcC---c-EEEEECCHHHHhc---ccCCeEEECChhhhcccCCCCEEEECC
Confidence 4699999999999999999987 6 999999 888887 56799999999887663 49998754
No 55
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.88 E-value=4e-09 Score=80.62 Aligned_cols=75 Identities=16% Similarity=0.142 Sum_probs=62.2
Q ss_pred HHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC---------CCcEEEecCCCCCCCC
Q 032721 55 SVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI---------PGVTHIGGDMFKSIPA 124 (135)
Q Consensus 55 ~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~---------~rv~~~~gd~~~~~p~ 124 (135)
.+++.++ .....+|+|+|||+|.++..+++.+|..+ ++++|. +.+++.++++ .+++++.+|+++.++.
T Consensus 213 ~ll~~l~-~~~~~~VLDlGcG~G~~s~~la~~~p~~~-V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~ 290 (375)
T 4dcm_A 213 FFMQHLP-ENLEGEIVDLGCGNGVIGLTLLDKNPQAK-VVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 290 (375)
T ss_dssp HHHHTCC-CSCCSEEEEETCTTCHHHHHHHHHCTTCE-EEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCT
T ss_pred HHHHhCc-ccCCCeEEEEeCcchHHHHHHHHHCCCCE-EEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCC
Confidence 4566665 44447999999999999999999999999 999999 8899888753 2588899999988764
Q ss_pred --CcEEEec
Q 032721 125 --ADAIFMK 131 (135)
Q Consensus 125 --~D~~~l~ 131 (135)
.|+|++.
T Consensus 291 ~~fD~Ii~n 299 (375)
T 4dcm_A 291 FRFNAVLCN 299 (375)
T ss_dssp TCEEEEEEC
T ss_pred CCeeEEEEC
Confidence 4999875
No 56
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.88 E-value=1.9e-09 Score=79.01 Aligned_cols=78 Identities=13% Similarity=0.159 Sum_probs=61.2
Q ss_pred HHHhccC----CCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCC
Q 032721 54 TSVLDGY----DGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS 121 (135)
Q Consensus 54 ~~~~~~~----~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~ 121 (135)
..+++.+ + ..+..+|||||||+|.++..+++.++ .+ ++++|+ +.+++.+++. ++++++.+|+.+.
T Consensus 68 ~~l~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~-~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 144 (297)
T 2o57_A 68 EWLASELAMTGV-LQRQAKGLDLGAGYGGAARFLVRKFG-VS-IDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI 144 (297)
T ss_dssp HHHHHHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHHC-CE-EEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC
T ss_pred HHHHHHhhhccC-CCCCCEEEEeCCCCCHHHHHHHHHhC-CE-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC
Confidence 3455555 4 56668999999999999999999873 47 999999 8888877642 5799999999763
Q ss_pred -CCC--CcEEEecccC
Q 032721 122 -IPA--ADAIFMKVHH 134 (135)
Q Consensus 122 -~p~--~D~~~l~~vl 134 (135)
+|. .|+|++.+++
T Consensus 145 ~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 145 PCEDNSYDFIWSQDAF 160 (297)
T ss_dssp SSCTTCEEEEEEESCG
T ss_pred CCCCCCEeEEEecchh
Confidence 443 3999988765
No 57
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.87 E-value=1.6e-09 Score=75.98 Aligned_cols=77 Identities=16% Similarity=0.177 Sum_probs=60.7
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC--CCcEEEecCCCCC-CCC-CcEE
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI--PGVTHIGGDMFKS-IPA-ADAI 128 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~--~rv~~~~gd~~~~-~p~-~D~~ 128 (135)
..+++.+. ..+..+|||||||+|.++..+++. ..+ ++++|+ +.+++.+++. .+++++.+|+.+. .+. .|++
T Consensus 35 ~~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v 110 (220)
T 3hnr_A 35 EDILEDVV-NKSFGNVLEFGVGTGNLTNKLLLA--GRT-VYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTI 110 (220)
T ss_dssp HHHHHHHH-HTCCSEEEEECCTTSHHHHHHHHT--TCE-EEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEE
T ss_pred HHHHHHhh-ccCCCeEEEeCCCCCHHHHHHHhC--CCe-EEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEE
Confidence 34555554 445579999999999999999997 556 999999 8888888654 4899999999764 333 4999
Q ss_pred EecccC
Q 032721 129 FMKVHH 134 (135)
Q Consensus 129 ~l~~vl 134 (135)
++.++|
T Consensus 111 ~~~~~l 116 (220)
T 3hnr_A 111 VSTYAF 116 (220)
T ss_dssp EEESCG
T ss_pred EECcch
Confidence 998775
No 58
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.87 E-value=4.1e-09 Score=73.89 Aligned_cols=73 Identities=15% Similarity=0.187 Sum_probs=58.5
Q ss_pred HhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------C-CcEEEecCCCCCC---CC
Q 032721 56 VLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------P-GVTHIGGDMFKSI---PA 124 (135)
Q Consensus 56 ~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~-rv~~~~gd~~~~~---p~ 124 (135)
+++.++ .....+|+|||||+|.++..+++. ..+ ++++|+ |.+++.|+++ + +++++.+|+.+.+ +.
T Consensus 47 ~l~~l~-~~~~~~vLDlGcG~G~~~~~la~~--~~~-v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~ 122 (204)
T 3njr_A 47 TLAALA-PRRGELLWDIGGGSGSVSVEWCLA--GGR-AITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPL 122 (204)
T ss_dssp HHHHHC-CCTTCEEEEETCTTCHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCC
T ss_pred HHHhcC-CCCCCEEEEecCCCCHHHHHHHHc--CCE-EEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCC
Confidence 445555 556689999999999999999998 667 999999 9999887653 4 8999999997743 34
Q ss_pred CcEEEecc
Q 032721 125 ADAIFMKV 132 (135)
Q Consensus 125 ~D~~~l~~ 132 (135)
.|++++..
T Consensus 123 ~D~v~~~~ 130 (204)
T 3njr_A 123 PEAVFIGG 130 (204)
T ss_dssp CSEEEECS
T ss_pred CCEEEECC
Confidence 69998764
No 59
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.86 E-value=1.6e-09 Score=75.84 Aligned_cols=74 Identities=12% Similarity=0.098 Sum_probs=56.4
Q ss_pred hccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------------------CCcEEEecC
Q 032721 57 LDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------------------PGVTHIGGD 117 (135)
Q Consensus 57 ~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------------------~rv~~~~gd 117 (135)
+..+. ..+..+|+|+|||+|..+..++++ ..+ ++++|+ +.+++.|++. .+++++.+|
T Consensus 15 ~~~l~-~~~~~~vLD~GCG~G~~~~~la~~--g~~-V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d 90 (203)
T 1pjz_A 15 WSSLN-VVPGARVLVPLCGKSQDMSWLSGQ--GYH-VVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGD 90 (203)
T ss_dssp HHHHC-CCTTCEEEETTTCCSHHHHHHHHH--CCE-EEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEEC
T ss_pred HHhcc-cCCCCEEEEeCCCCcHhHHHHHHC--CCe-EEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECc
Confidence 33343 455679999999999999999997 457 999999 8999887532 479999999
Q ss_pred CCCCC-C--C-CcEEEecccC
Q 032721 118 MFKSI-P--A-ADAIFMKVHH 134 (135)
Q Consensus 118 ~~~~~-p--~-~D~~~l~~vl 134 (135)
+++-. + . .|+++.+.+|
T Consensus 91 ~~~l~~~~~~~fD~v~~~~~l 111 (203)
T 1pjz_A 91 FFALTARDIGHCAAFYDRAAM 111 (203)
T ss_dssp CSSSTHHHHHSEEEEEEESCG
T ss_pred cccCCcccCCCEEEEEECcch
Confidence 97642 2 2 3999865543
No 60
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.86 E-value=3.9e-09 Score=76.98 Aligned_cols=77 Identities=13% Similarity=0.084 Sum_probs=61.4
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCCC-
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA- 124 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p~- 124 (135)
..+++.++ ..+..+|||||||+|.++..++++++. + ++++|+ +.+++.+++. ++++++.+|+. ++|.
T Consensus 54 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~-~-v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~ 129 (287)
T 1kpg_A 54 DLALGKLG-LQPGMTLLDVGCGWGATMMRAVEKYDV-N-VVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWE-QFDEP 129 (287)
T ss_dssp HHHHTTTT-CCTTCEEEEETCTTSHHHHHHHHHHCC-E-EEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGG-GCCCC
T ss_pred HHHHHHcC-CCCcCEEEEECCcccHHHHHHHHHcCC-E-EEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChh-hCCCC
Confidence 34666665 666689999999999999999977754 7 999999 8888877642 58999999994 4665
Q ss_pred CcEEEecccC
Q 032721 125 ADAIFMKVHH 134 (135)
Q Consensus 125 ~D~~~l~~vl 134 (135)
.|++++..+|
T Consensus 130 fD~v~~~~~l 139 (287)
T 1kpg_A 130 VDRIVSIGAF 139 (287)
T ss_dssp CSEEEEESCG
T ss_pred eeEEEEeCch
Confidence 4999988764
No 61
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.86 E-value=1.9e-09 Score=76.44 Aligned_cols=67 Identities=16% Similarity=0.154 Sum_probs=55.5
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-C-CcEEEecCCCCCCCC--CcEEEecccC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-P-GVTHIGGDMFKSIPA--ADAIFMKVHH 134 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-~-rv~~~~gd~~~~~p~--~D~~~l~~vl 134 (135)
+..+|||||||+|.++..+++..+ + ++++|+ +.+++.|++. . +++++.+|+.+..+. .|++++.++|
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~-v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l 113 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--D-ITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVL 113 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--C-EEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCG
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--c-EEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHH
Confidence 346899999999999999999876 5 999999 8898887653 2 899999999665443 3999998876
No 62
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.85 E-value=1.4e-09 Score=73.69 Aligned_cols=75 Identities=13% Similarity=0.111 Sum_probs=59.5
Q ss_pred HHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCCC--C
Q 032721 55 SVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPA--A 125 (135)
Q Consensus 55 ~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p~--~ 125 (135)
.+++.++ ..+..+|+|+|||+|.++..+++ +..+ ++++|. +.+++.++++ ++++++.+|+.+.+|. .
T Consensus 26 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~--~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 101 (183)
T 2yxd_A 26 VSIGKLN-LNKDDVVVDVGCGSGGMTVEIAK--RCKF-VYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLEF 101 (183)
T ss_dssp HHHHHHC-CCTTCEEEEESCCCSHHHHHHHT--TSSE-EEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCCC
T ss_pred HHHHHcC-CCCCCEEEEeCCCCCHHHHHHHh--cCCe-EEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCCC
Confidence 3444444 55557999999999999999998 7777 999999 8888887653 5799999999776553 5
Q ss_pred cEEEeccc
Q 032721 126 DAIFMKVH 133 (135)
Q Consensus 126 D~~~l~~v 133 (135)
|++++..+
T Consensus 102 D~i~~~~~ 109 (183)
T 2yxd_A 102 NKAFIGGT 109 (183)
T ss_dssp SEEEECSC
T ss_pred cEEEECCc
Confidence 99988653
No 63
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.85 E-value=1.6e-09 Score=79.80 Aligned_cols=64 Identities=14% Similarity=0.145 Sum_probs=55.2
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCC-CC---cEEEec
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP-AA---DAIFMK 131 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p-~~---D~~~l~ 131 (135)
..+|+|+|||+|.++..+++. |+.+ ++++|+ +.+++.|+++ .+++++.+|+++.++ .. |+++..
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~-~~~~-v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~Ivsn 199 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF-SDAI-VFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSN 199 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH-SSCE-EEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEEC
T ss_pred CCEEEEEeCchhHHHHHHHHC-CCCE-EEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEc
Confidence 368999999999999999999 9999 999999 9999988753 369999999988654 35 998874
No 64
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.85 E-value=4.2e-09 Score=76.83 Aligned_cols=66 Identities=20% Similarity=0.263 Sum_probs=57.0
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCCC--CcEEEec
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPA--ADAIFMK 131 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p~--~D~~~l~ 131 (135)
+..+|+|+|||+|.++..+++.+|+.+ ++++|+ +.+++.++++ ++++++.+|+++.++. .|++++.
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~-v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~n 183 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCE-IIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSN 183 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSE-EEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEEC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEEC
Confidence 346999999999999999999999999 999999 8999888754 5799999999887643 4999875
No 65
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.85 E-value=4.8e-09 Score=75.17 Aligned_cols=69 Identities=10% Similarity=0.076 Sum_probs=55.3
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCC-CCC--CcEEEeccc
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPA--ADAIFMKVH 133 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~-~p~--~D~~~l~~v 133 (135)
..+..+|+|||||+|.++..+++. ..+ ++++|+ +.+++.+++. ++++++.+|+.+. ++. .|++++.++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 113 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYR-YIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHL 113 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCE-EEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESC
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCE-EEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCc
Confidence 455689999999999999999987 456 999999 8888877542 6899999999553 343 399998876
Q ss_pred C
Q 032721 134 H 134 (135)
Q Consensus 134 l 134 (135)
+
T Consensus 114 l 114 (263)
T 2yqz_A 114 W 114 (263)
T ss_dssp G
T ss_pred h
Confidence 4
No 66
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.85 E-value=7.9e-09 Score=72.51 Aligned_cols=70 Identities=13% Similarity=0.222 Sum_probs=53.4
Q ss_pred hccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHh----CCC------CCCcEEEecCCCCCCCCC
Q 032721 57 LDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAE----APS------IPGVTHIGGDMFKSIPAA 125 (135)
Q Consensus 57 ~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~----a~~------~~rv~~~~gd~~~~~p~~ 125 (135)
++.++ ..+..+|||||||+|.++..+++.+|..+ ++++|+ +.+++. +++ .++++++.+|+.+ +|..
T Consensus 20 ~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~p~~~-v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~-l~~~ 96 (218)
T 3mq2_A 20 FEQLR-SQYDDVVLDVGTGDGKHPYKVARQNPSRL-VVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER-LPPL 96 (218)
T ss_dssp HHHHH-TTSSEEEEEESCTTCHHHHHHHHHCTTEE-EEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT-CCSC
T ss_pred HHHhh-ccCCCEEEEecCCCCHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh-CCCC
Confidence 33343 44568999999999999999999999999 999999 776664 332 2589999999966 4432
Q ss_pred ---cEEE
Q 032721 126 ---DAIF 129 (135)
Q Consensus 126 ---D~~~ 129 (135)
|.++
T Consensus 97 ~~~d~v~ 103 (218)
T 3mq2_A 97 SGVGELH 103 (218)
T ss_dssp CCEEEEE
T ss_pred CCCCEEE
Confidence 6655
No 67
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.85 E-value=7e-09 Score=81.65 Aligned_cols=78 Identities=18% Similarity=0.128 Sum_probs=59.2
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC-------CCcEEEecCCCC-CCCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFK-SIPA 124 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~-------~rv~~~~gd~~~-~~p~ 124 (135)
...+++.++ ..+..+|+|||||+|.++..+++ .+..+ ++++|+.++++.|++. ++++++.+|+.+ ++|.
T Consensus 147 ~~~il~~l~-~~~~~~VLDiGcGtG~la~~la~-~~~~~-V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~ 223 (480)
T 3b3j_A 147 QRAILQNHT-DFKDKIVLDVGCGSGILSFFAAQ-AGARK-IYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPE 223 (480)
T ss_dssp HHHHHHTGG-GTTTCEEEEESCSTTHHHHHHHH-TTCSE-EEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSS
T ss_pred HHHHHHhhh-hcCCCEEEEecCcccHHHHHHHH-cCCCE-EEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccCC
Confidence 344555554 44557999999999999998887 67778 9999995577776542 689999999987 3555
Q ss_pred -CcEEEeccc
Q 032721 125 -ADAIFMKVH 133 (135)
Q Consensus 125 -~D~~~l~~v 133 (135)
.|+|+...+
T Consensus 224 ~fD~Ivs~~~ 233 (480)
T 3b3j_A 224 QVDIIISEPM 233 (480)
T ss_dssp CEEEEECCCC
T ss_pred CeEEEEEeCc
Confidence 499997543
No 68
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.85 E-value=4.2e-09 Score=79.30 Aligned_cols=79 Identities=16% Similarity=0.153 Sum_probs=62.5
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCCCCC-Cc
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKSIPA-AD 126 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~~p~-~D 126 (135)
..+++.++ .....+|+|+|||+|.++..+++.+|+.+ ++++|+ +.+++.++++ ..++++.+|+++..+. .|
T Consensus 186 ~~ll~~l~-~~~~~~VLDlGcG~G~~~~~la~~~~~~~-v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD 263 (343)
T 2pjd_A 186 QLLLSTLT-PHTKGKVLDVGCGAGVLSVAFARHSPKIR-LTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFD 263 (343)
T ss_dssp HHHHHHSC-TTCCSBCCBTTCTTSHHHHHHHHHCTTCB-CEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEE
T ss_pred HHHHHhcC-cCCCCeEEEecCccCHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCee
Confidence 44566664 33457899999999999999999999999 999999 8888887653 3477889999876544 49
Q ss_pred EEEecccC
Q 032721 127 AIFMKVHH 134 (135)
Q Consensus 127 ~~~l~~vl 134 (135)
++++..++
T Consensus 264 ~Iv~~~~~ 271 (343)
T 2pjd_A 264 MIISNPPF 271 (343)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99987553
No 69
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.85 E-value=6.5e-09 Score=74.45 Aligned_cols=94 Identities=14% Similarity=0.195 Sum_probs=70.6
Q ss_pred CchHHHHHHHHHhcccccc----HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHH-CCCCCeeEEeec-hHHHHhCCC
Q 032721 34 KPEMNGLMRKAMSGVSVPF----MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQK-HPFICEGINFDL-PEVVAEAPS 107 (135)
Q Consensus 34 ~~~~~~~f~~~m~~~~~~~----~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~-~p~l~~~~~~D~-p~~~~~a~~ 107 (135)
+|... .|...|....... ...+++.++ ..+..+|+|+|||+|.++..+++. .|..+ ++++|+ +.+++.+++
T Consensus 63 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~-v~~~D~~~~~~~~a~~ 139 (258)
T 2pwy_A 63 RPTLE-EYLLHMKRSATPTYPKDASAMVTLLD-LAPGMRVLEAGTGSGGLTLFLARAVGEKGL-VESYEARPHHLAQAER 139 (258)
T ss_dssp CCCHH-HHHHHSCCSSCCCCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSE-EEEEESCHHHHHHHHH
T ss_pred CCCHH-HHhhcCccccccccchHHHHHHHHcC-CCCCCEEEEECCCcCHHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHH
Confidence 45443 4445555544432 335666676 667789999999999999999998 67888 999999 888887764
Q ss_pred C-------CCcEEEecCCCCC-CCC--CcEEEe
Q 032721 108 I-------PGVTHIGGDMFKS-IPA--ADAIFM 130 (135)
Q Consensus 108 ~-------~rv~~~~gd~~~~-~p~--~D~~~l 130 (135)
+ ++++++.+|+.+. +|. .|++++
T Consensus 140 ~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~ 172 (258)
T 2pwy_A 140 NVRAFWQVENVRFHLGKLEEAELEEAAYDGVAL 172 (258)
T ss_dssp HHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEE
T ss_pred HHHHhcCCCCEEEEECchhhcCCCCCCcCEEEE
Confidence 3 6899999999776 554 499986
No 70
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.84 E-value=1.1e-08 Score=72.50 Aligned_cols=67 Identities=16% Similarity=0.208 Sum_probs=56.3
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC---CCcEEEecCCCCC-CCC--CcEEEecccC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI---PGVTHIGGDMFKS-IPA--ADAIFMKVHH 134 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~---~rv~~~~gd~~~~-~p~--~D~~~l~~vl 134 (135)
+..+|||||||+|.++..+++. ..+ ++++|+ +.+++.+++. .+++++.+|+.+. +|. .|++++.++|
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 126 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT--GYK-AVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSL 126 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCT
T ss_pred CCCeEEEEcCCCCHHHHHHHHc--CCe-EEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChH
Confidence 4579999999999999999998 456 999999 8899888764 6899999999764 443 3999998876
No 71
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.84 E-value=3.5e-09 Score=75.50 Aligned_cols=78 Identities=21% Similarity=0.232 Sum_probs=62.1
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC-CCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-IPA 124 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~-~p~ 124 (135)
...+++..+ ..+..+|+|||||+|.++..+++..+ + ++++|+ +.+++.+++. ++++++.+|+.+- ++.
T Consensus 10 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 10 LGLMIKTAE-CRAEHRVLDIGAGAGHTALAFSPYVQ--E-CIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHHHHHT-CCTTCEEEEESCTTSHHHHHHGGGSS--E-EEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCT
T ss_pred cchHHHHhC-cCCCCEEEEEccCcCHHHHHHHHhCC--E-EEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCC
Confidence 445666666 67778999999999999999999875 5 999999 8898887643 5799999998553 333
Q ss_pred --CcEEEecccC
Q 032721 125 --ADAIFMKVHH 134 (135)
Q Consensus 125 --~D~~~l~~vl 134 (135)
.|++++.+++
T Consensus 86 ~~fD~v~~~~~l 97 (239)
T 1xxl_A 86 DSFDIITCRYAA 97 (239)
T ss_dssp TCEEEEEEESCG
T ss_pred CcEEEEEECCch
Confidence 3999988765
No 72
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.84 E-value=3.3e-09 Score=76.47 Aligned_cols=67 Identities=21% Similarity=0.200 Sum_probs=55.1
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-CCcEEEecCCCCC-CCC-CcEEEecc-cC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS-IPA-ADAIFMKV-HH 134 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-~rv~~~~gd~~~~-~p~-~D~~~l~~-vl 134 (135)
+..+|||||||+|.++..+++..+ + ++++|+ +.+++.+++. ++++++.+|+.+. .+. .|++++.. +|
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~--~-v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l 121 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG--T-VEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSI 121 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS--E-EEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGG
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC--e-EEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchh
Confidence 447999999999999999999854 5 999999 9999988764 6899999999764 333 39999876 44
No 73
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.82 E-value=3e-09 Score=77.60 Aligned_cols=75 Identities=19% Similarity=0.183 Sum_probs=58.7
Q ss_pred HHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCC--CC
Q 032721 55 SVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSI--PA 124 (135)
Q Consensus 55 ~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~--p~ 124 (135)
.+++.++ .. ..+|||||||+|.++..+++. ..+ ++++|+ +.+++.+++. ++++++.+|+.+.. +.
T Consensus 60 ~~l~~~~-~~-~~~vLDiGcG~G~~~~~l~~~--~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 134 (285)
T 4htf_A 60 RVLAEMG-PQ-KLRVLDAGGGEGQTAIKMAER--GHQ-VILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLE 134 (285)
T ss_dssp HHHHHTC-SS-CCEEEEETCTTCHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCS
T ss_pred HHHHhcC-CC-CCEEEEeCCcchHHHHHHHHC--CCE-EEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcC
Confidence 4555554 33 479999999999999999998 557 999999 8899887653 57999999996542 33
Q ss_pred --CcEEEecccC
Q 032721 125 --ADAIFMKVHH 134 (135)
Q Consensus 125 --~D~~~l~~vl 134 (135)
.|++++.++|
T Consensus 135 ~~fD~v~~~~~l 146 (285)
T 4htf_A 135 TPVDLILFHAVL 146 (285)
T ss_dssp SCEEEEEEESCG
T ss_pred CCceEEEECchh
Confidence 3999998775
No 74
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.82 E-value=5.6e-09 Score=79.70 Aligned_cols=69 Identities=14% Similarity=0.165 Sum_probs=58.2
Q ss_pred CcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec-hHHHHhCCCC--------------CCcEEEecCCCC-------C
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDL-PEVVAEAPSI--------------PGVTHIGGDMFK-------S 121 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~-p~~~~~a~~~--------------~rv~~~~gd~~~-------~ 121 (135)
+..+|||||||+|.++..+++.+ |..+ ++++|+ +.+++.++++ ++++++.+|+.+ +
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~-v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGK-VIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCE-EEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 44799999999999999999987 7888 999999 8899888753 689999999976 4
Q ss_pred CCC--CcEEEecccC
Q 032721 122 IPA--ADAIFMKVHH 134 (135)
Q Consensus 122 ~p~--~D~~~l~~vl 134 (135)
+|. .|+|++..+|
T Consensus 162 ~~~~~fD~V~~~~~l 176 (383)
T 4fsd_A 162 VPDSSVDIVISNCVC 176 (383)
T ss_dssp CCTTCEEEEEEESCG
T ss_pred CCCCCEEEEEEccch
Confidence 443 3999988765
No 75
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.82 E-value=3.6e-09 Score=75.58 Aligned_cols=78 Identities=19% Similarity=0.249 Sum_probs=61.4
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----CCcEEEecCCCCC-CCC--C
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS-IPA--A 125 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----~rv~~~~gd~~~~-~p~--~ 125 (135)
..+++.++ ..+..+|||||||+|.++..+++.. ..+ ++++|+ +.+++.+++. .+++++.+|+.+. +|. .
T Consensus 83 ~~~l~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~-~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~f 159 (254)
T 1xtp_A 83 RNFIASLP-GHGTSRALDCGAGIGRITKNLLTKL-YAT-TDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTY 159 (254)
T ss_dssp HHHHHTST-TCCCSEEEEETCTTTHHHHHTHHHH-CSE-EEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCE
T ss_pred HHHHHhhc-ccCCCEEEEECCCcCHHHHHHHHhh-cCE-EEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCe
Confidence 45666665 5566899999999999999999886 446 999999 8888887643 5799999998654 343 3
Q ss_pred cEEEecccC
Q 032721 126 DAIFMKVHH 134 (135)
Q Consensus 126 D~~~l~~vl 134 (135)
|++++.++|
T Consensus 160 D~v~~~~~l 168 (254)
T 1xtp_A 160 DLIVIQWTA 168 (254)
T ss_dssp EEEEEESCG
T ss_pred EEEEEcchh
Confidence 999998775
No 76
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.82 E-value=7.5e-09 Score=72.65 Aligned_cols=65 Identities=20% Similarity=0.263 Sum_probs=54.8
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC---CCC--CcEEEec
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS---IPA--ADAIFMK 131 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~---~p~--~D~~~l~ 131 (135)
..+|+|||||+|.++..+++.+|+.+ ++++|+ +.+++.|+++ ++++++.+|+.+- ++. .|++++.
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~-v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDIN-YIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCC-EEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 46899999999999999999999999 999999 8999887653 6899999999752 333 3888865
No 77
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.81 E-value=4.2e-09 Score=71.91 Aligned_cols=74 Identities=19% Similarity=0.192 Sum_probs=58.1
Q ss_pred HHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-CCcEEEecCCCCC-CCC--CcEEE
Q 032721 55 SVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS-IPA--ADAIF 129 (135)
Q Consensus 55 ~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-~rv~~~~gd~~~~-~p~--~D~~~ 129 (135)
.+++.+ ..+..+|+|||||+|.++..+++. ..+ ++++|+ +.+++.+++. ++++++.+|+.+. +|. .|+++
T Consensus 38 ~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 112 (195)
T 3cgg_A 38 RLIDAM--APRGAKILDAGCGQGRIGGYLSKQ--GHD-VLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIV 112 (195)
T ss_dssp HHHHHH--SCTTCEEEEETCTTTHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEE
T ss_pred HHHHHh--ccCCCeEEEECCCCCHHHHHHHHC--CCc-EEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEE
Confidence 455554 235579999999999999999987 456 999999 8888888764 6799999999774 443 49999
Q ss_pred ec-cc
Q 032721 130 MK-VH 133 (135)
Q Consensus 130 l~-~v 133 (135)
+. .+
T Consensus 113 ~~~~~ 117 (195)
T 3cgg_A 113 SAGNV 117 (195)
T ss_dssp ECCCC
T ss_pred ECCcH
Confidence 86 44
No 78
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.81 E-value=1.1e-08 Score=69.72 Aligned_cols=76 Identities=9% Similarity=0.133 Sum_probs=60.1
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------C--CcEEEecCCCCCCCC
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------P--GVTHIGGDMFKSIPA 124 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~--rv~~~~gd~~~~~p~ 124 (135)
..+++.+. ..+..+|+|+|||+|.++..+++. ..+ ++++|+ |.+++.++++ + +++++.+|+.+..+.
T Consensus 42 ~~l~~~~~-~~~~~~vLdiG~G~G~~~~~~~~~--~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~ 117 (194)
T 1dus_A 42 KILVENVV-VDKDDDILDLGCGYGVIGIALADE--VKS-TTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKD 117 (194)
T ss_dssp HHHHHHCC-CCTTCEEEEETCTTSHHHHHHGGG--SSE-EEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTT
T ss_pred HHHHHHcc-cCCCCeEEEeCCCCCHHHHHHHHc--CCe-EEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccccc
Confidence 44556665 556679999999999999999988 567 999999 8888887642 3 499999999887554
Q ss_pred --CcEEEeccc
Q 032721 125 --ADAIFMKVH 133 (135)
Q Consensus 125 --~D~~~l~~v 133 (135)
.|++++...
T Consensus 118 ~~~D~v~~~~~ 128 (194)
T 1dus_A 118 RKYNKIITNPP 128 (194)
T ss_dssp SCEEEEEECCC
T ss_pred CCceEEEECCC
Confidence 399998654
No 79
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.80 E-value=5.5e-09 Score=73.08 Aligned_cols=69 Identities=16% Similarity=0.154 Sum_probs=56.2
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----CCcEEEecCCCCCCCC--CcEEEecccC
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKSIPA--ADAIFMKVHH 134 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----~rv~~~~gd~~~~~p~--~D~~~l~~vl 134 (135)
..+..+|||||||+|.++..+++.. .+ ++++|+ +.+++.+++. ++++++.+|+.+..|. .|++++.+++
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l 124 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC--KR-LTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVL 124 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE--EE-EEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCG
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC--CE-EEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHH
Confidence 4556899999999999999999885 35 999999 8888887642 5799999999765433 3999998765
No 80
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.80 E-value=5.5e-09 Score=72.59 Aligned_cols=66 Identities=14% Similarity=0.060 Sum_probs=55.3
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCCC--CcEEEecc
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPA--ADAIFMKV 132 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p~--~D~~~l~~ 132 (135)
..+|+|+|||+|.++..+++.+|..+ ++++|. |.+++.++++ ++++++.+|+.+..|. .|++++..
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~ 140 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAH-FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRA 140 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSC
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEec
Confidence 47999999999999999999999988 999999 8888887642 4599999999775443 39998654
No 81
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.79 E-value=8.9e-09 Score=70.78 Aligned_cols=76 Identities=16% Similarity=0.077 Sum_probs=59.4
Q ss_pred HHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC-CCC-C
Q 032721 55 SVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-IPA-A 125 (135)
Q Consensus 55 ~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~-~p~-~ 125 (135)
.+++.++ ..+..+|+|||||+|.++..+++. ..+ ++++|+ +.+++.+++. ++++++.+|+.+. .+. .
T Consensus 23 ~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 98 (199)
T 2xvm_A 23 EVLEAVK-VVKPGKTLDLGCGNGRNSLYLAAN--GYD-VDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQY 98 (199)
T ss_dssp HHHHHTT-TSCSCEEEEETCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCE
T ss_pred HHHHHhh-ccCCCeEEEEcCCCCHHHHHHHHC--CCe-EEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCc
Confidence 4555555 445579999999999999999987 557 999999 8888887652 4799999998664 333 4
Q ss_pred cEEEecccC
Q 032721 126 DAIFMKVHH 134 (135)
Q Consensus 126 D~~~l~~vl 134 (135)
|++++..++
T Consensus 99 D~v~~~~~l 107 (199)
T 2xvm_A 99 DFILSTVVL 107 (199)
T ss_dssp EEEEEESCG
T ss_pred eEEEEcchh
Confidence 999988764
No 82
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.79 E-value=4.5e-09 Score=72.85 Aligned_cols=66 Identities=15% Similarity=0.064 Sum_probs=55.3
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-CCcEEEecCCCCC-CCC--CcEEEecccC
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS-IPA--ADAIFMKVHH 134 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-~rv~~~~gd~~~~-~p~--~D~~~l~~vl 134 (135)
..+|||||||+|.++..+++. +.+ ++++|+ +.+++.+++. ++++++.+|+.+. .+. .|++++.++|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 112 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQ-IEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSL 112 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCC-EEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSS
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCe-EEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhH
Confidence 478999999999999999998 457 999999 8999988764 7899999999663 333 3999998775
No 83
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.79 E-value=1.8e-09 Score=75.59 Aligned_cols=67 Identities=15% Similarity=0.088 Sum_probs=54.5
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------C-CcEEEecCCCCCCCC--CcEEEecccC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------P-GVTHIGGDMFKSIPA--ADAIFMKVHH 134 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~-rv~~~~gd~~~~~p~--~D~~~l~~vl 134 (135)
...+|+|+|||+|.++..++...|+.+ ++++|+ +.+++.++++ . ++++ .|..+..|. .|++++-++|
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~-~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~L 125 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKII-YHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKML 125 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCE-EEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETCH
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCE-EEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhHH
Confidence 457999999999999999999999998 999999 9999988753 2 4555 677655443 4999987664
No 84
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.79 E-value=2.6e-09 Score=75.84 Aligned_cols=66 Identities=12% Similarity=0.152 Sum_probs=53.8
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC----CCCC--cEEEec
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS----IPAA--DAIFMK 131 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~----~p~~--D~~~l~ 131 (135)
...+|||||||+|.++..+++.+|+.. ++++|+ +.+++.|+++ .+++++.+|..+. +|.. |.+++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~-v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQD-FLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSE-EEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCe-EEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 347999999999999999999999999 999999 8888877542 5799999997542 4442 777664
No 85
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.78 E-value=1.3e-09 Score=73.67 Aligned_cols=74 Identities=19% Similarity=0.160 Sum_probs=59.7
Q ss_pred HHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC-CCCcEEEecCCCCCCCC--CcEEEe
Q 032721 55 SVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS-IPGVTHIGGDMFKSIPA--ADAIFM 130 (135)
Q Consensus 55 ~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~-~~rv~~~~gd~~~~~p~--~D~~~l 130 (135)
.+++.++ ..+..+|+|||||+|.++..+++... + ++++|+ +.+++.+++ .++++++.+| .+++. .|++++
T Consensus 8 ~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~--~-v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~~~~~D~v~~ 81 (170)
T 3i9f_A 8 EYLPNIF-EGKKGVIVDYGCGNGFYCKYLLEFAT--K-LYCIDINVIALKEVKEKFDSVITLSDP--KEIPDNSVDFILF 81 (170)
T ss_dssp TTHHHHH-SSCCEEEEEETCTTCTTHHHHHTTEE--E-EEEECSCHHHHHHHHHHCTTSEEESSG--GGSCTTCEEEEEE
T ss_pred HHHHhcC-cCCCCeEEEECCCCCHHHHHHHhhcC--e-EEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCCCCceEEEEE
Confidence 3445555 56668999999999999999999874 6 999999 888888876 4789999999 44554 499999
Q ss_pred cccC
Q 032721 131 KVHH 134 (135)
Q Consensus 131 ~~vl 134 (135)
.+++
T Consensus 82 ~~~l 85 (170)
T 3i9f_A 82 ANSF 85 (170)
T ss_dssp ESCS
T ss_pred ccch
Confidence 8876
No 86
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.78 E-value=7.1e-09 Score=74.48 Aligned_cols=66 Identities=9% Similarity=0.004 Sum_probs=54.1
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCC----CCCCC----C-CcE
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDM----FKSIP----A-ADA 127 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~----~~~~p----~-~D~ 127 (135)
+..+|+|+|||+|.++..++++.|+.+ ++++|+ |.+++.|+++ .+++++.+|. ++.++ . .|+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWY-FLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 346999999999999999999988888 999999 9999888653 4699999984 33454 2 499
Q ss_pred EEec
Q 032721 128 IFMK 131 (135)
Q Consensus 128 ~~l~ 131 (135)
+++.
T Consensus 144 i~~n 147 (254)
T 2h00_A 144 CMCN 147 (254)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9875
No 87
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.78 E-value=8.6e-09 Score=72.09 Aligned_cols=78 Identities=17% Similarity=0.151 Sum_probs=62.0
Q ss_pred HHhccCCCCCCcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCC-C-
Q 032721 55 SVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIP-A- 124 (135)
Q Consensus 55 ~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p-~- 124 (135)
.+++.++ ..+..+|+|||||+|.++..+++.. |+.+ ++++|. +.+++.++++ ++++++.+|+...++ .
T Consensus 68 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 145 (215)
T 2yxe_A 68 MMCELLD-LKPGMKVLEIGTGCGYHAAVTAEIVGEDGL-VVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLA 145 (215)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGC
T ss_pred HHHHhhC-CCCCCEEEEECCCccHHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCC
Confidence 4555555 5566799999999999999999988 6677 999999 8888887653 579999999966655 2
Q ss_pred -CcEEEecccC
Q 032721 125 -ADAIFMKVHH 134 (135)
Q Consensus 125 -~D~~~l~~vl 134 (135)
.|++++..++
T Consensus 146 ~fD~v~~~~~~ 156 (215)
T 2yxe_A 146 PYDRIYTTAAG 156 (215)
T ss_dssp CEEEEEESSBB
T ss_pred CeeEEEECCch
Confidence 4999987654
No 88
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.78 E-value=7.3e-09 Score=73.82 Aligned_cols=68 Identities=18% Similarity=0.170 Sum_probs=55.9
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC---CCcEEEecCCCCC-CCC-------CcEEEec
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI---PGVTHIGGDMFKS-IPA-------ADAIFMK 131 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~---~rv~~~~gd~~~~-~p~-------~D~~~l~ 131 (135)
.+..+|||||||+|.++..+++..+ + ++++|+ |.+++.+++. .+++++.+|+.+. .+. .|++++.
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--R-VIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--C-EEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--C-EEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 4457999999999999999999988 6 999999 8899887643 5899999999773 221 5899888
Q ss_pred ccC
Q 032721 132 VHH 134 (135)
Q Consensus 132 ~vl 134 (135)
.++
T Consensus 132 ~~~ 134 (245)
T 3ggd_A 132 TGF 134 (245)
T ss_dssp SSS
T ss_pred chh
Confidence 765
No 89
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.78 E-value=4.6e-08 Score=69.39 Aligned_cols=71 Identities=21% Similarity=0.247 Sum_probs=55.6
Q ss_pred hccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhC----CCCCCcEEEecCCCC----C-CCC-C
Q 032721 57 LDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEA----PSIPGVTHIGGDMFK----S-IPA-A 125 (135)
Q Consensus 57 ~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a----~~~~rv~~~~gd~~~----~-~p~-~ 125 (135)
++.++ ..+..+|+|+|||+|.++..+++..|..+ ++++|. +.+++.+ +..+++.++.+|+.+ . ++. .
T Consensus 67 l~~~~-~~~~~~VLDlGcG~G~~~~~la~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 144 (230)
T 1fbn_A 67 LKVMP-IKRDSKILYLGASAGTTPSHVADIADKGI-VYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKV 144 (230)
T ss_dssp CCCCC-CCTTCEEEEESCCSSHHHHHHHHHTTTSE-EEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCE
T ss_pred ccccC-CCCCCEEEEEcccCCHHHHHHHHHcCCcE-EEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccE
Confidence 44444 55667999999999999999999998667 999999 8888654 334789999999976 2 233 3
Q ss_pred cEEE
Q 032721 126 DAIF 129 (135)
Q Consensus 126 D~~~ 129 (135)
|+++
T Consensus 145 D~v~ 148 (230)
T 1fbn_A 145 DVIY 148 (230)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9887
No 90
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.78 E-value=9.4e-10 Score=76.41 Aligned_cols=75 Identities=20% Similarity=0.135 Sum_probs=48.6
Q ss_pred HHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCCCC-----
Q 032721 55 SVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKSIP----- 123 (135)
Q Consensus 55 ~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~~p----- 123 (135)
.+++.++...+..+|+|+|||+|.++..+++.+|+.+ ++++|+ +.+++.++++ .+++++.+|+++.++
T Consensus 20 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 98 (215)
T 4dzr_A 20 EAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVS-VTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAER 98 (215)
T ss_dssp HHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEE-EEEEECC-------------------CCHHHHHHHHHHHHHT
T ss_pred HHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhc
Confidence 3444443124568999999999999999999999888 999999 9999998865 168899999877643
Q ss_pred -C-CcEEEe
Q 032721 124 -A-ADAIFM 130 (135)
Q Consensus 124 -~-~D~~~l 130 (135)
. .|++++
T Consensus 99 ~~~fD~i~~ 107 (215)
T 4dzr_A 99 GRPWHAIVS 107 (215)
T ss_dssp TCCBSEEEE
T ss_pred cCcccEEEE
Confidence 2 499987
No 91
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.77 E-value=2.2e-08 Score=70.09 Aligned_cols=88 Identities=16% Similarity=0.113 Sum_probs=59.5
Q ss_pred HHHHHhccccccHHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCC
Q 032721 41 MRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMF 119 (135)
Q Consensus 41 f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~ 119 (135)
|...+..+.......+++.++ .+..+|+|||||+|.++..+++. + .+ ++++|+ +.+++.+++.. .+++.+|+.
T Consensus 10 y~~~~~~~~~~~~~~l~~~~~--~~~~~vLdiG~G~G~~~~~l~~~-~-~~-~~~~D~~~~~~~~~~~~~-~~~~~~d~~ 83 (230)
T 3cc8_A 10 YEEKSGHYYNAVNPNLLKHIK--KEWKEVLDIGCSSGALGAAIKEN-G-TR-VSGIEAFPEAAEQAKEKL-DHVVLGDIE 83 (230)
T ss_dssp ----------CCCHHHHTTCC--TTCSEEEEETCTTSHHHHHHHTT-T-CE-EEEEESSHHHHHHHHTTS-SEEEESCTT
T ss_pred hhccchhHHHHHHHHHHHHhc--cCCCcEEEeCCCCCHHHHHHHhc-C-Ce-EEEEeCCHHHHHHHHHhC-CcEEEcchh
Confidence 333444444444455666664 34579999999999999999998 4 67 999999 88888887642 378889986
Q ss_pred CC---CCC--CcEEEecccC
Q 032721 120 KS---IPA--ADAIFMKVHH 134 (135)
Q Consensus 120 ~~---~p~--~D~~~l~~vl 134 (135)
+. ++. .|++++.+++
T Consensus 84 ~~~~~~~~~~fD~v~~~~~l 103 (230)
T 3cc8_A 84 TMDMPYEEEQFDCVIFGDVL 103 (230)
T ss_dssp TCCCCSCTTCEEEEEEESCG
T ss_pred hcCCCCCCCccCEEEECChh
Confidence 52 333 3999988765
No 92
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.77 E-value=4e-09 Score=76.34 Aligned_cols=79 Identities=10% Similarity=0.122 Sum_probs=60.4
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec-hH------HHHhCCCC-------CCcEEEecC-
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDL-PE------VVAEAPSI-------PGVTHIGGD- 117 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~-p~------~~~~a~~~-------~rv~~~~gd- 117 (135)
..+++.++ ..+..+|+|||||+|.++..+++++ |+.+ ++++|+ +. +++.++++ ++++++.+|
T Consensus 33 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~-v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 110 (275)
T 3bkx_A 33 LAIAEAWQ-VKPGEKILEIGCGQGDLSAVLADQVGSSGH-VTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTN 110 (275)
T ss_dssp HHHHHHHT-CCTTCEEEEESCTTSHHHHHHHHHHCTTCE-EEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCC
T ss_pred HHHHHHcC-CCCCCEEEEeCCCCCHHHHHHHHHhCCCCE-EEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECCh
Confidence 34666665 6666899999999999999999996 7788 999999 54 67666532 579999998
Q ss_pred CCCC-C--CC--CcEEEecccC
Q 032721 118 MFKS-I--PA--ADAIFMKVHH 134 (135)
Q Consensus 118 ~~~~-~--p~--~D~~~l~~vl 134 (135)
+... + +. .|++++.+++
T Consensus 111 ~~~~~~~~~~~~fD~v~~~~~l 132 (275)
T 3bkx_A 111 LSDDLGPIADQHFDRVVLAHSL 132 (275)
T ss_dssp TTTCCGGGTTCCCSEEEEESCG
T ss_pred hhhccCCCCCCCEEEEEEccch
Confidence 6443 3 32 4999988765
No 93
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.77 E-value=6.6e-09 Score=73.26 Aligned_cols=64 Identities=17% Similarity=0.246 Sum_probs=53.0
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC---CCC--CcEEEe
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS---IPA--ADAIFM 130 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~---~p~--~D~~~l 130 (135)
..+|||||||+|.++..+++.+|+.+ ++++|+ +.+++.|+++ ++++++.+|..+- +|. .|.+++
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~-v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDIN-YIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSE-EEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCC-EEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 46899999999999999999999999 999999 8898887642 5799999998652 343 387765
No 94
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.77 E-value=1.1e-08 Score=75.73 Aligned_cols=77 Identities=18% Similarity=0.165 Sum_probs=61.6
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCCC-
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA- 124 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p~- 124 (135)
..+++.++ ..+..+|+|||||+|.++..+++.+ +.+ ++++|+ +.+++.+++. ++++++.+|+. .+|.
T Consensus 80 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~-~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~ 155 (318)
T 2fk8_A 80 DLNLDKLD-LKPGMTLLDIGCGWGTTMRRAVERF-DVN-VIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWE-DFAEP 155 (318)
T ss_dssp HHHHTTSC-CCTTCEEEEESCTTSHHHHHHHHHH-CCE-EEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGG-GCCCC
T ss_pred HHHHHhcC-CCCcCEEEEEcccchHHHHHHHHHC-CCE-EEEEECCHHHHHHHHHHHHhcCCCCceEEEECChH-HCCCC
Confidence 45666665 6666899999999999999999987 457 999999 8888887642 57999999984 3565
Q ss_pred CcEEEecccC
Q 032721 125 ADAIFMKVHH 134 (135)
Q Consensus 125 ~D~~~l~~vl 134 (135)
.|++++..+|
T Consensus 156 fD~v~~~~~l 165 (318)
T 2fk8_A 156 VDRIVSIEAF 165 (318)
T ss_dssp CSEEEEESCG
T ss_pred cCEEEEeChH
Confidence 4999988664
No 95
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.77 E-value=3.7e-09 Score=76.50 Aligned_cols=69 Identities=17% Similarity=0.067 Sum_probs=56.7
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCC-----C-CcEEEe
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIP-----A-ADAIFM 130 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p-----~-~D~~~l 130 (135)
....+|+|||||+|..+..++..+|+.+ ++++|. +.+++.++++ .+++++.+|..+-.+ . .|+++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELE-LVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCE-EEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEE
Confidence 4457999999999999999999999999 999999 8899888753 569999999854221 2 399988
Q ss_pred ccc
Q 032721 131 KVH 133 (135)
Q Consensus 131 ~~v 133 (135)
+.+
T Consensus 158 ~a~ 160 (249)
T 3g89_A 158 RAV 160 (249)
T ss_dssp ESS
T ss_pred CCc
Confidence 754
No 96
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.77 E-value=5.5e-09 Score=74.11 Aligned_cols=74 Identities=20% Similarity=0.241 Sum_probs=57.1
Q ss_pred HhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCCC--C
Q 032721 56 VLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA--A 125 (135)
Q Consensus 56 ~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p~--~ 125 (135)
++.... +++ .+|||||||+|.++..+++ +..+ ++++|+ +.+++.+++. .+++++.+|+.+..|. .
T Consensus 59 ~~~~~~-~~~-~~vLDiGcG~G~~~~~l~~--~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~f 133 (235)
T 3lcc_A 59 LVDTSS-LPL-GRALVPGCGGGHDVVAMAS--PERF-VVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELF 133 (235)
T ss_dssp HHHTTC-SCC-EEEEEETCTTCHHHHHHCB--TTEE-EEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCE
T ss_pred HHHhcC-CCC-CCEEEeCCCCCHHHHHHHh--CCCe-EEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCe
Confidence 344443 444 5999999999999999876 5667 999999 8888887643 4699999999875443 4
Q ss_pred cEEEecccC
Q 032721 126 DAIFMKVHH 134 (135)
Q Consensus 126 D~~~l~~vl 134 (135)
|++++..+|
T Consensus 134 D~v~~~~~l 142 (235)
T 3lcc_A 134 DLIFDYVFF 142 (235)
T ss_dssp EEEEEESST
T ss_pred eEEEEChhh
Confidence 999988765
No 97
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.77 E-value=1.2e-08 Score=71.08 Aligned_cols=78 Identities=14% Similarity=0.171 Sum_probs=61.3
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCCC-
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPA- 124 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p~- 124 (135)
...+++.++ ..+..+|+|||||+|.++..+++. ..+ ++++|+ +.+++.++++ ++++++.+|..+..+.
T Consensus 66 ~~~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~--~~~-v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 141 (210)
T 3lbf_A 66 VARMTELLE-LTPQSRVLEIGTGSGYQTAILAHL--VQH-VCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQAR 141 (210)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHHHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHh--CCE-EEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccC
Confidence 344555665 666789999999999999999998 456 999999 8888887653 5799999999876432
Q ss_pred --CcEEEecccC
Q 032721 125 --ADAIFMKVHH 134 (135)
Q Consensus 125 --~D~~~l~~vl 134 (135)
.|++++...+
T Consensus 142 ~~~D~i~~~~~~ 153 (210)
T 3lbf_A 142 APFDAIIVTAAP 153 (210)
T ss_dssp CCEEEEEESSBC
T ss_pred CCccEEEEccch
Confidence 3999987543
No 98
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.76 E-value=1.1e-08 Score=74.33 Aligned_cols=98 Identities=14% Similarity=0.151 Sum_probs=70.4
Q ss_pred ccccCchHHHHHHHHHhccccc----cHHHHhccCCCCCCcceEEeecCCCCHHHHHHHHH-CCCCCeeEEeec-hHHHH
Q 032721 30 YYGKKPEMNGLMRKAMSGVSVP----FMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQK-HPFICEGINFDL-PEVVA 103 (135)
Q Consensus 30 ~~~~~~~~~~~f~~~m~~~~~~----~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~-~p~l~~~~~~D~-p~~~~ 103 (135)
++...|... .+...|...+.. ....++..++ ..+..+|+|+|||+|.++..+++. .|..+ ++++|+ +.+++
T Consensus 62 ~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~-v~~vD~~~~~~~ 138 (280)
T 1i9g_A 62 FLVLRPLLV-DYVMSMPRGPQVIYPKDAAQIVHEGD-IFPGARVLEAGAGSGALTLSLLRAVGPAGQ-VISYEQRADHAE 138 (280)
T ss_dssp EEEECCCHH-HHHTTSCSCSCCCCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSE-EEEECSCHHHHH
T ss_pred EEEeCCCHH-HHHhhccccceeecHHHHHHHHHHcC-CCCCCEEEEEcccccHHHHHHHHHhCCCCE-EEEEeCCHHHHH
Confidence 334455553 444555554443 2345666666 666689999999999999999996 57788 999999 88888
Q ss_pred hCCCC---------CCcEEEecCCCCC-CCC--CcEEEe
Q 032721 104 EAPSI---------PGVTHIGGDMFKS-IPA--ADAIFM 130 (135)
Q Consensus 104 ~a~~~---------~rv~~~~gd~~~~-~p~--~D~~~l 130 (135)
.|+++ ++++++.+|+.+. ++. .|++++
T Consensus 139 ~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~ 177 (280)
T 1i9g_A 139 HARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVL 177 (280)
T ss_dssp HHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEE
T ss_pred HHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEE
Confidence 77532 4799999999765 333 499886
No 99
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.75 E-value=7.5e-09 Score=72.18 Aligned_cols=69 Identities=19% Similarity=0.100 Sum_probs=55.3
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCCCCC--CcEEEecccC
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPA--ADAIFMKVHH 134 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~~p~--~D~~~l~~vl 134 (135)
+.+..+|||||||+|.++..+++. ..+ ++++|+ +.+++.+++..+++++.+|+.+..+. .|++++.++|
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l 112 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFD-VDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHACL 112 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSCG
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCe-EEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCch
Confidence 334579999999999999999987 456 999999 88998887655788888998553222 3999998775
No 100
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.75 E-value=1.5e-08 Score=72.64 Aligned_cols=65 Identities=12% Similarity=0.211 Sum_probs=52.9
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCC------------CCCCcEEEecCCCCC----CCCC--
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAP------------SIPGVTHIGGDMFKS----IPAA-- 125 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~------------~~~rv~~~~gd~~~~----~p~~-- 125 (135)
+..+|||||||+|.++..+++.+|+.. ++++|+ +.+++.|+ ...+++++.+|..+. ++.+
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~-v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTL-ILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSE-EEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCe-EEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 447899999999999999999999999 999999 88887553 136899999999763 3332
Q ss_pred cEEEe
Q 032721 126 DAIFM 130 (135)
Q Consensus 126 D~~~l 130 (135)
|.+++
T Consensus 125 D~v~~ 129 (235)
T 3ckk_A 125 TKMFF 129 (235)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 87765
No 101
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.75 E-value=3.1e-09 Score=76.59 Aligned_cols=67 Identities=21% Similarity=0.232 Sum_probs=54.8
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCC-CCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCC---CC---CCcEE
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHP-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS---IP---AADAI 128 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p-~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~---~p---~~D~~ 128 (135)
.+..+|||||||+|..+..+++..| +.+ ++++|+ |.+++.|+++ ++++++.+|..+. ++ ..|++
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQ-LLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCE-EEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 3457999999999999999999998 677 999999 8888887653 5899999998653 22 24999
Q ss_pred Eec
Q 032721 129 FMK 131 (135)
Q Consensus 129 ~l~ 131 (135)
++.
T Consensus 141 ~~d 143 (248)
T 3tfw_A 141 FID 143 (248)
T ss_dssp EEC
T ss_pred EEC
Confidence 864
No 102
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.74 E-value=1.2e-08 Score=74.42 Aligned_cols=77 Identities=19% Similarity=0.178 Sum_probs=62.8
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHH-CCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQK-HPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP 123 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~-~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p 123 (135)
+..++..++ ..+..+|+|+|||+|.++..+++. .|..+ ++++|+ |.+++.|+++ ++++++.+|+.+.+|
T Consensus 101 ~~~i~~~~~-~~~~~~VLDiG~G~G~~~~~la~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 178 (277)
T 1o54_A 101 SSFIAMMLD-VKEGDRIIDTGVGSGAMCAVLARAVGSSGK-VFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD 178 (277)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHTTTTCE-EEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS
T ss_pred HHHHHHHhC-CCCCCEEEEECCcCCHHHHHHHHHhCCCcE-EEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc
Confidence 345666666 666689999999999999999999 67888 999999 8888887653 479999999987665
Q ss_pred C--CcEEEec
Q 032721 124 A--ADAIFMK 131 (135)
Q Consensus 124 ~--~D~~~l~ 131 (135)
. .|++++.
T Consensus 179 ~~~~D~V~~~ 188 (277)
T 1o54_A 179 EKDVDALFLD 188 (277)
T ss_dssp CCSEEEEEEC
T ss_pred CCccCEEEEC
Confidence 4 4999873
No 103
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.74 E-value=3e-09 Score=78.55 Aligned_cols=71 Identities=15% Similarity=0.062 Sum_probs=57.6
Q ss_pred CCCcceEEeecCCCCHHHHHHH-HHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCC-CCC-CcEEEec
Q 032721 63 FKGVKRLVDVGGSAGDCLRMIL-QKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IPA-ADAIFMK 131 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~-~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~-~p~-~D~~~l~ 131 (135)
..+..+|+|||||+|.++..++ ..+|+.+ ++++|+ +.+++.++++ .+++++.+|+.+. .+. .|++++.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~ 194 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQ-LVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSN 194 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCE-EEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCe-EEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEEC
Confidence 3455799999999999999996 6788999 999999 8898887643 4599999999764 343 3999987
Q ss_pred ccC
Q 032721 132 VHH 134 (135)
Q Consensus 132 ~vl 134 (135)
.++
T Consensus 195 ~~~ 197 (305)
T 3ocj_A 195 GLN 197 (305)
T ss_dssp SSG
T ss_pred Chh
Confidence 754
No 104
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.73 E-value=3.6e-09 Score=75.42 Aligned_cols=69 Identities=17% Similarity=0.236 Sum_probs=57.4
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCC----C-CcEEE
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP----A-ADAIF 129 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p----~-~D~~~ 129 (135)
..+..+|||||||+|..+..+++..|..+ ++++|+ |.+++.|+++ ++++++.+|+.+.+| . .|+++
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~ 147 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASISDDIH-VTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIF 147 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTCTTCE-EEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEE
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEE
Confidence 34457999999999999999999888888 999999 8899888653 489999999987655 3 39998
Q ss_pred ecc
Q 032721 130 MKV 132 (135)
Q Consensus 130 l~~ 132 (135)
+..
T Consensus 148 ~~~ 150 (232)
T 3ntv_A 148 IDA 150 (232)
T ss_dssp EET
T ss_pred EcC
Confidence 753
No 105
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.73 E-value=1.8e-08 Score=73.11 Aligned_cols=68 Identities=15% Similarity=0.158 Sum_probs=55.8
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----------CCcEEEecCCCCC--------CC
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----------PGVTHIGGDMFKS--------IP 123 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----------~rv~~~~gd~~~~--------~p 123 (135)
..+..+|+|+|||+|.++..++++.|..+ ++++|+ |.+++.|+++ ++++++.+|+.+. ++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~-v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 112 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAE-VTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLP 112 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEE-EEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCC
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccC
Confidence 44557999999999999999999999888 999999 8888876532 2699999999765 23
Q ss_pred C--CcEEEec
Q 032721 124 A--ADAIFMK 131 (135)
Q Consensus 124 ~--~D~~~l~ 131 (135)
. .|+|++.
T Consensus 113 ~~~fD~Vv~n 122 (260)
T 2ozv_A 113 DEHFHHVIMN 122 (260)
T ss_dssp TTCEEEEEEC
T ss_pred CCCcCEEEEC
Confidence 2 3999875
No 106
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.72 E-value=2.2e-08 Score=69.62 Aligned_cols=66 Identities=14% Similarity=0.099 Sum_probs=53.5
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCCC-CcEEEecc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPA-ADAIFMKV 132 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p~-~D~~~l~~ 132 (135)
+..+|+|||||+|.++..+++ .+..+ ++++|+ +.+++.++++ .+++++.+|+.+..+. .|++++..
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~-~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~ 133 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHK-LGAKS-VLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANI 133 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHH-TTCSE-EEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHH-CCCCE-EEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECC
Confidence 447999999999999999776 56667 999999 8898887653 3499999999776554 49998754
No 107
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.71 E-value=1.1e-08 Score=75.12 Aligned_cols=88 Identities=11% Similarity=0.052 Sum_probs=58.8
Q ss_pred HHHHHHHhcc-ccccHHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC--------
Q 032721 39 GLMRKAMSGV-SVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------- 108 (135)
Q Consensus 39 ~~f~~~m~~~-~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------- 108 (135)
..|...+... .......+++.++ .. ..+|||||||+|.++..+++. ..+ ++++|+ +.+++.+++.
T Consensus 57 ~~y~~~~~~~~~~~~~~~~~~~~~-~~-~~~vLDlGcG~G~~~~~l~~~--~~~-v~gvD~s~~~~~~a~~~~~~~~~~~ 131 (299)
T 3g2m_A 57 DTYRDLIQDADGTSEAREFATRTG-PV-SGPVLELAAGMGRLTFPFLDL--GWE-VTALELSTSVLAAFRKRLAEAPADV 131 (299)
T ss_dssp ---------CCCHHHHHHHHHHHC-CC-CSCEEEETCTTTTTHHHHHTT--TCC-EEEEESCHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHhcccCccHHHHHHHHhhC-CC-CCcEEEEeccCCHHHHHHHHc--CCe-EEEEECCHHHHHHHHHHHhhccccc
Confidence 3344444432 2233455666654 33 349999999999999999997 467 999999 8999888653
Q ss_pred -CCcEEEecCCCCC-CCC-CcEEEec
Q 032721 109 -PGVTHIGGDMFKS-IPA-ADAIFMK 131 (135)
Q Consensus 109 -~rv~~~~gd~~~~-~p~-~D~~~l~ 131 (135)
.+++++.+|+.+. .+. .|++++.
T Consensus 132 ~~~v~~~~~d~~~~~~~~~fD~v~~~ 157 (299)
T 3g2m_A 132 RDRCTLVQGDMSAFALDKRFGTVVIS 157 (299)
T ss_dssp HTTEEEEECBTTBCCCSCCEEEEEEC
T ss_pred ccceEEEeCchhcCCcCCCcCEEEEC
Confidence 5799999999764 333 3988864
No 108
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.71 E-value=5.6e-09 Score=74.63 Aligned_cols=69 Identities=17% Similarity=0.096 Sum_probs=55.6
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC-C----CC-CcEEE
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-I----PA-ADAIF 129 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~-~----p~-~D~~~ 129 (135)
+.+..+|+|||||+|.++..++...|+.+ ++++|+ +.+++.++++ ++++++.+|+.+- . +. .|+++
T Consensus 68 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~ 146 (240)
T 1xdz_A 68 FNQVNTICDVGAGAGFPSLPIKICFPHLH-VTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVT 146 (240)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHHCTTCE-EEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEE
T ss_pred cCCCCEEEEecCCCCHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEE
Confidence 34557999999999999999999999988 999999 8888887653 4799999988442 1 22 39998
Q ss_pred ecc
Q 032721 130 MKV 132 (135)
Q Consensus 130 l~~ 132 (135)
+..
T Consensus 147 ~~~ 149 (240)
T 1xdz_A 147 ARA 149 (240)
T ss_dssp EEC
T ss_pred Eec
Confidence 765
No 109
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.71 E-value=1.7e-08 Score=71.37 Aligned_cols=64 Identities=16% Similarity=0.150 Sum_probs=53.4
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-CCcEEEecCCCCCCC---C--CcEEEec
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKSIP---A--ADAIFMK 131 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-~rv~~~~gd~~~~~p---~--~D~~~l~ 131 (135)
+..+|+|||||+|.++..+++. ..+ ++++|+ +.+++.++++ ++++++.+|+.+.+| . .|+|+..
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~ 118 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ--AAR-WAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR 118 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG--SSE-EEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCE-EEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC
Confidence 4479999999999999999998 456 999999 8999988764 789999999976644 2 3998864
No 110
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.70 E-value=3.7e-08 Score=76.65 Aligned_cols=79 Identities=14% Similarity=0.278 Sum_probs=59.6
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhC-------CC--------CCCcEEEecC
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEA-------PS--------IPGVTHIGGD 117 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a-------~~--------~~rv~~~~gd 117 (135)
..+++.++ .....+|||||||+|.++..+++.++..+ ++++|+ +.+++.| ++ ..+++++.+|
T Consensus 232 ~~ml~~l~-l~~g~~VLDLGCGsG~la~~LA~~~g~~~-V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD 309 (433)
T 1u2z_A 232 SDVYQQCQ-LKKGDTFMDLGSGVGNCVVQAALECGCAL-SFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK 309 (433)
T ss_dssp HHHHHHTT-CCTTCEEEEESCTTSHHHHHHHHHHCCSE-EEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS
T ss_pred HHHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHCCCCE-EEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcC
Confidence 44555665 66678999999999999999999988778 999999 7777766 32 2579998875
Q ss_pred CC-CC--C----CCCcEEEecccC
Q 032721 118 MF-KS--I----PAADAIFMKVHH 134 (135)
Q Consensus 118 ~~-~~--~----p~~D~~~l~~vl 134 (135)
-+ .. + ...|+|++.+.+
T Consensus 310 ~~~~~~~~~~~~~~FDvIvvn~~l 333 (433)
T 1u2z_A 310 SFVDNNRVAELIPQCDVILVNNFL 333 (433)
T ss_dssp CSTTCHHHHHHGGGCSEEEECCTT
T ss_pred ccccccccccccCCCCEEEEeCcc
Confidence 44 32 2 235999987654
No 111
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.70 E-value=3.3e-09 Score=74.72 Aligned_cols=68 Identities=16% Similarity=0.165 Sum_probs=55.1
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCC-CCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCC-------C-Cc
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHP-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP-------A-AD 126 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p-~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p-------~-~D 126 (135)
.+..+|+|||||+|..+..+++..| +.+ ++++|+ |.+++.|+++ ++++++.+|..+.+| . .|
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGR-VVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 3457999999999999999999998 677 999999 8888887642 479999999865432 2 49
Q ss_pred EEEecc
Q 032721 127 AIFMKV 132 (135)
Q Consensus 127 ~~~l~~ 132 (135)
++++..
T Consensus 136 ~v~~d~ 141 (223)
T 3duw_A 136 FIFIDA 141 (223)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 988643
No 112
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.69 E-value=1.7e-08 Score=69.05 Aligned_cols=66 Identities=11% Similarity=0.034 Sum_probs=51.6
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC--C-CC-CcEEEec
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS--I-PA-ADAIFMK 131 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~--~-p~-~D~~~l~ 131 (135)
..+..+|+|+|||+|.++..++++ ..+ ++++|+ |.+++.|+++ ++++++.+|+..- . +. .|++++.
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~--~~~-v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL--SKK-VYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT--SSE-EEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCE-EEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 345579999999999999999987 667 999999 9999988753 6799998766331 2 33 4988765
No 113
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.68 E-value=4.9e-08 Score=69.98 Aligned_cols=58 Identities=14% Similarity=0.237 Sum_probs=48.8
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC--------------CCCcEEEecCCCCCCC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS--------------IPGVTHIGGDMFKSIP 123 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~--------------~~rv~~~~gd~~~~~p 123 (135)
+..+|||||||+|.++..+++.+|+.+ ++++|+ +.+++.+++ .++++++.+|.++.+|
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~ 121 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDL-ILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLP 121 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSE-EEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGG
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCC-EEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHH
Confidence 457999999999999999999999988 999998 888876532 2579999999976433
No 114
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.68 E-value=2.5e-08 Score=69.12 Aligned_cols=66 Identities=21% Similarity=0.247 Sum_probs=54.4
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-CCcEEEecCCCCCCCC-CcEEEeccc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKSIPA-ADAIFMKVH 133 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-~rv~~~~gd~~~~~p~-~D~~~l~~v 133 (135)
+..+|+|+|||+|.++..+++. +..+ ++++|+ |.+++.++++ .+++++.+|+.+ +|. .|++++...
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~-~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~D~v~~~~p 119 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL-GAES-VTAFDIDPDAIETAKRNCGGVNFMVADVSE-ISGKYDTWIMNPP 119 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT-TBSE-EEEEESCHHHHHHHHHHCTTSEEEECCGGG-CCCCEEEEEECCC
T ss_pred CCCEEEEEeCCccHHHHHHHHc-CCCE-EEEEECCHHHHHHHHHhcCCCEEEECcHHH-CCCCeeEEEECCC
Confidence 4479999999999999999987 5456 999999 8999988764 489999999966 565 499988644
No 115
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.68 E-value=1.8e-08 Score=74.83 Aligned_cols=68 Identities=21% Similarity=0.280 Sum_probs=56.0
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCCC--CcEEEecc
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPA--ADAIFMKV 132 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p~--~D~~~l~~ 132 (135)
..+..+|+|||||+|.++..++.+.++.+ ++++|+ |.+++.|+++ ++++++.+|..+ +|. .|++++..
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~-V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~-l~d~~FDvV~~~a 196 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMR-VNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV-IDGLEFDVLMVAA 196 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCE-EEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG-GGGCCCSEEEECT
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCE-EEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh-CCCCCcCEEEECC
Confidence 45668999999999988777667778888 999999 9999998753 689999999965 553 49998753
No 116
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.68 E-value=3.1e-08 Score=69.60 Aligned_cols=67 Identities=13% Similarity=0.085 Sum_probs=53.7
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----------CCcEEEecCCCCC-CCC--CcEEE
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----------PGVTHIGGDMFKS-IPA--ADAIF 129 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----------~rv~~~~gd~~~~-~p~--~D~~~ 129 (135)
+..+|||||||+|.++..+++. ..+ ++++|+ +.+++.+++. .+++++.+|+.+. .+. .|+++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK--GYS-VTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhC--CCe-EEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 4579999999999999999998 557 999999 8888877542 2589999999764 333 49999
Q ss_pred ecccC
Q 032721 130 MKVHH 134 (135)
Q Consensus 130 l~~vl 134 (135)
+..++
T Consensus 107 ~~~~l 111 (235)
T 3sm3_A 107 MQAFL 111 (235)
T ss_dssp EESCG
T ss_pred Ecchh
Confidence 88765
No 117
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.68 E-value=1.9e-08 Score=69.79 Aligned_cols=68 Identities=18% Similarity=0.122 Sum_probs=54.7
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----CCcEEEecCCCCC-CCC--CcEEEeccc
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS-IPA--ADAIFMKVH 133 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----~rv~~~~gd~~~~-~p~--~D~~~l~~v 133 (135)
.+..+|+|||||+|.++..+++..+. + ++++|+ +.+++.+++. ++++++.+|+.+. ++. .|+++...+
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~-~-v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~ 116 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFP-N-VTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGT 116 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCC-C-EEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCC-c-EEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcc
Confidence 34479999999999999999998765 7 999999 8888877643 6899999999763 443 399987543
No 118
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.68 E-value=3.3e-08 Score=70.61 Aligned_cols=74 Identities=18% Similarity=0.221 Sum_probs=56.5
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCC-CCC-C
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPA-A 125 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~-~p~-~ 125 (135)
..++.... ..+..+|+|||||+|.++..+++. ..+ ++++|+ +.+++.++++ .+++++.+|+.+. .+. .
T Consensus 31 ~~~~~~~~-~~~~~~vLDlGcG~G~~~~~l~~~--~~~-v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~f 106 (252)
T 1wzn_A 31 EEIFKEDA-KREVRRVLDLACGTGIPTLELAER--GYE-VVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEF 106 (252)
T ss_dssp HHHHHHTC-SSCCCEEEEETCTTCHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCE
T ss_pred HHHHHHhc-ccCCCEEEEeCCCCCHHHHHHHHC--CCe-EEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCc
Confidence 34444443 445579999999999999999986 457 999999 8999887643 4799999999764 343 3
Q ss_pred cEEEec
Q 032721 126 DAIFMK 131 (135)
Q Consensus 126 D~~~l~ 131 (135)
|++++.
T Consensus 107 D~v~~~ 112 (252)
T 1wzn_A 107 DAVTMF 112 (252)
T ss_dssp EEEEEC
T ss_pred cEEEEc
Confidence 999864
No 119
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.68 E-value=1.6e-08 Score=73.71 Aligned_cols=77 Identities=16% Similarity=0.073 Sum_probs=59.7
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCC-CCC-C
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPA-A 125 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~-~p~-~ 125 (135)
..+++.++ ..+..+|||||||+|.++..+++. ..+ ++++|+ +.+++.+++. .+++++.+|+.+. .+. .
T Consensus 110 ~~~~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~--g~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~f 185 (286)
T 3m70_A 110 GDVVDAAK-IISPCKVLDLGCGQGRNSLYLSLL--GYD-VTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENY 185 (286)
T ss_dssp HHHHHHHH-HSCSCEEEEESCTTCHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCE
T ss_pred HHHHHHhh-ccCCCcEEEECCCCCHHHHHHHHC--CCe-EEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCc
Confidence 34555554 345579999999999999999998 457 999999 8888887653 2899999999764 333 4
Q ss_pred cEEEecccC
Q 032721 126 DAIFMKVHH 134 (135)
Q Consensus 126 D~~~l~~vl 134 (135)
|++++..++
T Consensus 186 D~i~~~~~~ 194 (286)
T 3m70_A 186 DFIVSTVVF 194 (286)
T ss_dssp EEEEECSSG
T ss_pred cEEEEccch
Confidence 999988765
No 120
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.67 E-value=2.2e-08 Score=71.35 Aligned_cols=58 Identities=14% Similarity=0.088 Sum_probs=46.1
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hH-HHHhC---CCC------CCcEEEecCCCCCCCC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PE-VVAEA---PSI------PGVTHIGGDMFKSIPA 124 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~-~~~~a---~~~------~rv~~~~gd~~~~~p~ 124 (135)
+..+|||||||+|.++..+++++|+.+ ++++|+ |+ +++.| ++. ++++++.+|..+ +|.
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~-v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~-l~~ 92 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTF-YIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAES-LPF 92 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEE-EEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTB-CCG
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHH-hhh
Confidence 447999999999999999999999999 999999 34 44444 543 579999999844 553
No 121
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.67 E-value=8.1e-09 Score=72.18 Aligned_cols=76 Identities=17% Similarity=0.076 Sum_probs=59.3
Q ss_pred HHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC-----CC-C-Cc
Q 032721 55 SVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-----IP-A-AD 126 (135)
Q Consensus 55 ~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-----~p-~-~D 126 (135)
.+++.+. .....+|||||||+|.++..+++. ..+ ++++|+ +.+++.+++..++.+..+|+.+. .+ . .|
T Consensus 43 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 43 AILLAIL-GRQPERVLDLGCGEGWLLRALADR--GIE-AVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp HHHHHHH-HTCCSEEEEETCTTCHHHHHHHTT--TCE-EEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred HHHHHhh-cCCCCEEEEeCCCCCHHHHHHHHC--CCE-EEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCcc
Confidence 3555554 334589999999999999999988 557 999999 89999988778888888887532 22 2 49
Q ss_pred EEEecccC
Q 032721 127 AIFMKVHH 134 (135)
Q Consensus 127 ~~~l~~vl 134 (135)
++++.++|
T Consensus 119 ~v~~~~~l 126 (227)
T 3e8s_A 119 LICANFAL 126 (227)
T ss_dssp EEEEESCC
T ss_pred EEEECchh
Confidence 99998876
No 122
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.67 E-value=2.5e-08 Score=73.31 Aligned_cols=68 Identities=19% Similarity=0.117 Sum_probs=54.4
Q ss_pred cceEEeecCCCCH----HHHHHHHHCC----CCCeeEEeec-hHHHHhCCCC----------------------------
Q 032721 66 VKRLVDVGGSAGD----CLRMILQKHP----FICEGINFDL-PEVVAEAPSI---------------------------- 108 (135)
Q Consensus 66 ~~~vvDvGgG~G~----~~~~l~~~~p----~l~~~~~~D~-p~~~~~a~~~---------------------------- 108 (135)
..+|+|+|||||. ++..+++..| +.+ +++.|+ +.+++.|++.
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~-I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWK-VFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEE-EEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeE-EEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 4689999999998 6677777755 356 999999 9999887542
Q ss_pred ---------CCcEEEecCCCCC-CC--C-CcEEEecccC
Q 032721 109 ---------PGVTHIGGDMFKS-IP--A-ADAIFMKVHH 134 (135)
Q Consensus 109 ---------~rv~~~~gd~~~~-~p--~-~D~~~l~~vl 134 (135)
.+|+|..+|+++. +| . .|+|++++||
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvl 223 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVM 223 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSG
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCch
Confidence 2689999999884 55 2 3999999986
No 123
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.67 E-value=1.9e-08 Score=71.19 Aligned_cols=63 Identities=25% Similarity=0.296 Sum_probs=51.7
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCC-CCC-CcEEEecc
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPA-ADAIFMKV 132 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~-~p~-~D~~~l~~ 132 (135)
..+|+|||||+|.++..+++. .+ ++++|+ +.+++.+++. .+++++.+|+.+. .+. .|++++..
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~---~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~ 104 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH---YE-VTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILC 104 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT---SE-EEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECT
T ss_pred CCeEEEecCCCCHHHHHHhhC---Ce-EEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeC
Confidence 379999999999999999887 56 999999 8899888653 5799999998664 344 39998754
No 124
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.66 E-value=3.5e-08 Score=69.67 Aligned_cols=77 Identities=14% Similarity=0.179 Sum_probs=60.6
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----CCcEEEecCCCCCCC--C-C
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKSIP--A-A 125 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----~rv~~~~gd~~~~~p--~-~ 125 (135)
..+++.++ ..+..+|+|||||+|.++..+++.. .+ ++++|+ +.+++.++++ .+++++.+|+.+..| . .
T Consensus 60 ~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~--~~-v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~f 135 (231)
T 1vbf_A 60 IFMLDELD-LHKGQKVLEIGTGIGYYTALIAEIV--DK-VVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPY 135 (231)
T ss_dssp HHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHS--SE-EEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCE
T ss_pred HHHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHHc--CE-EEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCc
Confidence 34555555 5566799999999999999999986 56 999999 8888887653 379999999977544 2 3
Q ss_pred cEEEecccC
Q 032721 126 DAIFMKVHH 134 (135)
Q Consensus 126 D~~~l~~vl 134 (135)
|++++..++
T Consensus 136 D~v~~~~~~ 144 (231)
T 1vbf_A 136 DRVVVWATA 144 (231)
T ss_dssp EEEEESSBB
T ss_pred cEEEECCcH
Confidence 999987664
No 125
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.66 E-value=5.5e-08 Score=68.54 Aligned_cols=68 Identities=13% Similarity=0.127 Sum_probs=52.0
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHH----HhCCCCCCcEEEecCCCCC-----CCC-CcEEEec
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVV----AEAPSIPGVTHIGGDMFKS-----IPA-ADAIFMK 131 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~----~~a~~~~rv~~~~gd~~~~-----~p~-~D~~~l~ 131 (135)
..+..+|+|||||+|.++..+++..+..+ ++++|+ |.++ +.++...++.++.+|..+. ++. .|++++.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~-V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 133 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGI-IYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD 133 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSE-EEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCE-EEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEe
Confidence 45557999999999999999999988667 999999 7644 4444446788888998653 233 3998764
No 126
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.66 E-value=1.8e-08 Score=73.06 Aligned_cols=67 Identities=7% Similarity=-0.057 Sum_probs=53.2
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC-----------------------CCCcEEEecCCCC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS-----------------------IPGVTHIGGDMFK 120 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~-----------------------~~rv~~~~gd~~~ 120 (135)
+..+|+|+|||+|..+..|++. ..+ ++++|+ |.+++.|++ ..+++++.+|+++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~~-V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GHT-VVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TCE-EEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CCe-EEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 4479999999999999999987 457 999999 889887642 1579999999987
Q ss_pred C-CC--C-CcEEEecccC
Q 032721 121 S-IP--A-ADAIFMKVHH 134 (135)
Q Consensus 121 ~-~p--~-~D~~~l~~vl 134 (135)
- .+ . .|+++.+.+|
T Consensus 145 l~~~~~~~FD~V~~~~~l 162 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGAL 162 (252)
T ss_dssp GGGGCCCCEEEEEESSST
T ss_pred CCcccCCCEEEEEEhhhh
Confidence 5 22 2 3999976654
No 127
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.66 E-value=3.1e-08 Score=70.31 Aligned_cols=68 Identities=15% Similarity=0.154 Sum_probs=53.4
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec-hHH----HHhCCCCCCcEEEecCCCCC--CC---C-CcEEEe
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDL-PEV----VAEAPSIPGVTHIGGDMFKS--IP---A-ADAIFM 130 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~-p~~----~~~a~~~~rv~~~~gd~~~~--~p---~-~D~~~l 130 (135)
.....+|+|+|||+|.++..+++.. |..+ ++++|+ |.+ ++.++.+.+++++.+|+.+. +| . .|++++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~-v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGL-VYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCE-EEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcE-EEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 5556799999999999999999987 6778 999999 654 44454457899999999773 22 2 399887
Q ss_pred c
Q 032721 131 K 131 (135)
Q Consensus 131 ~ 131 (135)
.
T Consensus 154 ~ 154 (233)
T 2ipx_A 154 D 154 (233)
T ss_dssp C
T ss_pred c
Confidence 4
No 128
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.66 E-value=1.4e-08 Score=72.29 Aligned_cols=68 Identities=15% Similarity=0.121 Sum_probs=54.5
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC-CCC--CcEEEecccC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-IPA--ADAIFMKVHH 134 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~-~p~--~D~~~l~~vl 134 (135)
+..+|||||||+|.++..++++. ..+ ++++|+ +.+++.+++. .+++++.+|+.+. .+. .|++++.++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FRE-VDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSE-EEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCE-EEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchh
Confidence 45799999999999999999887 446 999999 8899887653 3588999998554 333 4999988765
No 129
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.65 E-value=2.9e-08 Score=70.12 Aligned_cols=63 Identities=21% Similarity=0.265 Sum_probs=52.8
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-CCcEEEecCCCCC-CCC-CcEEEe
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS-IPA-ADAIFM 130 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-~rv~~~~gd~~~~-~p~-~D~~~l 130 (135)
+..+|+|||||+|.++..+++..+ + ++++|+ +.+++.+++. ++++++.+|+.+. .+. .|++++
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~--~-v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~ 106 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG--D-TAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVS 106 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS--E-EEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEE
T ss_pred CCCeEEEecccCCHHHHHHHHhCC--c-EEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEE
Confidence 457999999999999999999977 6 999999 9999988764 6899999999764 333 399983
No 130
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.65 E-value=3e-08 Score=73.04 Aligned_cols=75 Identities=23% Similarity=0.395 Sum_probs=59.0
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCC-CC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IP 123 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~-~p 123 (135)
...+++.++ ..+..+|+|||||+|.++..+++... + ++++|+ +.+++.+++. ++++++.+|+.+. +|
T Consensus 17 ~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~L~~~~~--~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~ 92 (285)
T 1zq9_A 17 INSIIDKAA-LRPTDVVLEVGPGTGNMTVKLLEKAK--K-VVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP 92 (285)
T ss_dssp HHHHHHHTC-CCTTCEEEEECCTTSTTHHHHHHHSS--E-EEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC
T ss_pred HHHHHHhcC-CCCCCEEEEEcCcccHHHHHHHhhCC--E-EEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch
Confidence 345666665 66668999999999999999999854 5 999999 8888876542 4799999999764 56
Q ss_pred CCcEEEec
Q 032721 124 AADAIFMK 131 (135)
Q Consensus 124 ~~D~~~l~ 131 (135)
..|+++..
T Consensus 93 ~fD~vv~n 100 (285)
T 1zq9_A 93 FFDTCVAN 100 (285)
T ss_dssp CCSEEEEE
T ss_pred hhcEEEEe
Confidence 56988763
No 131
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.65 E-value=3.7e-08 Score=70.98 Aligned_cols=76 Identities=7% Similarity=0.195 Sum_probs=57.5
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----CCcEEEecCCCCC-CCC-C
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS-IPA-A 125 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----~rv~~~~gd~~~~-~p~-~ 125 (135)
...+++..+ ..+..+|+|||||+|.++..++++. .+ ++++|+ +.+++.++++ ++++++.+|+.+- ++. .
T Consensus 19 ~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~l~~~~--~~-v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~ 94 (244)
T 1qam_A 19 IDKIMTNIR-LNEHDNIFEIGSGKGHFTLELVQRC--NF-VTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQ 94 (244)
T ss_dssp HHHHHTTCC-CCTTCEEEEECCTTSHHHHHHHHHS--SE-EEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSC
T ss_pred HHHHHHhCC-CCCCCEEEEEeCCchHHHHHHHHcC--Ce-EEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCC
Confidence 455666665 6666899999999999999999986 46 999999 8888876542 6899999999764 443 3
Q ss_pred cEEEecc
Q 032721 126 DAIFMKV 132 (135)
Q Consensus 126 D~~~l~~ 132 (135)
+..++.+
T Consensus 95 ~~~vv~n 101 (244)
T 1qam_A 95 SYKIFGN 101 (244)
T ss_dssp CCEEEEE
T ss_pred CeEEEEe
Confidence 4444443
No 132
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.64 E-value=1.5e-08 Score=68.73 Aligned_cols=66 Identities=12% Similarity=0.117 Sum_probs=53.0
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCC---CC-CcEEEecc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSI---PA-ADAIFMKV 132 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~---p~-~D~~~l~~ 132 (135)
+..+|+|+|||+|.++..+++. +..+ ++++|+ +.+++.++++ ++++++.+|+.+.+ +. .|++++..
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~-~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSR-GMSA-AVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHT-TCCE-EEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCCE-EEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 4579999999999999999987 6567 999999 8899887642 47999999987632 23 49998753
No 133
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.64 E-value=1.5e-07 Score=65.02 Aligned_cols=62 Identities=26% Similarity=0.293 Sum_probs=47.5
Q ss_pred HHhccCCCCCCcceEEeecCCCCHHHHHHHHHCC--CCCeeEEeechHHHHhCCCCCCcEEEecCCCCC
Q 032721 55 SVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHP--FICEGINFDLPEVVAEAPSIPGVTHIGGDMFKS 121 (135)
Q Consensus 55 ~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p--~l~~~~~~D~p~~~~~a~~~~rv~~~~gd~~~~ 121 (135)
++.+.+..+.+..+|+|||||+|.++..+++++| ..+ ++++|+.++ ...++++++.+|+.+.
T Consensus 12 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~-v~gvD~s~~----~~~~~v~~~~~d~~~~ 75 (201)
T 2plw_A 12 ELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNK-IIGIDKKIM----DPIPNVYFIQGEIGKD 75 (201)
T ss_dssp HHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEE-EEEEESSCC----CCCTTCEEEECCTTTT
T ss_pred HHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCce-EEEEeCCcc----CCCCCceEEEccccch
Confidence 3455554234557999999999999999999998 577 999999442 1236799999999764
No 134
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.63 E-value=5e-08 Score=73.48 Aligned_cols=75 Identities=20% Similarity=0.201 Sum_probs=56.7
Q ss_pred HHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC-------CCcEEEecCCCCC-CC-C-
Q 032721 55 SVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS-IP-A- 124 (135)
Q Consensus 55 ~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~-------~rv~~~~gd~~~~-~p-~- 124 (135)
.+.+... ..+..+|+|||||+|.++..+++. +..+ ++++|..++++.|+++ ++++++.+|+.+. +| .
T Consensus 55 ~i~~~~~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~-v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 131 (340)
T 2fyt_A 55 FIYQNPH-IFKDKVVLDVGCGTGILSMFAAKA-GAKK-VLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEK 131 (340)
T ss_dssp HHHHCGG-GTTTCEEEEETCTTSHHHHHHHHT-TCSE-EEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSC
T ss_pred HHHhhhh-hcCCCEEEEeeccCcHHHHHHHHc-CCCE-EEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCc
Confidence 3444444 445579999999999999999987 4456 9999995588777642 6899999999764 55 3
Q ss_pred CcEEEecc
Q 032721 125 ADAIFMKV 132 (135)
Q Consensus 125 ~D~~~l~~ 132 (135)
.|+++...
T Consensus 132 ~D~Ivs~~ 139 (340)
T 2fyt_A 132 VDVIISEW 139 (340)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 49999755
No 135
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.63 E-value=4.4e-08 Score=70.20 Aligned_cols=65 Identities=18% Similarity=0.113 Sum_probs=53.7
Q ss_pred cceEEeecCCCCHHHHHHHHH----CCCCCeeEEeec-hHHHHhCCCC-CCcEEEecCCCCC--C---CC--CcEEEec
Q 032721 66 VKRLVDVGGSAGDCLRMILQK----HPFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS--I---PA--ADAIFMK 131 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~----~p~l~~~~~~D~-p~~~~~a~~~-~rv~~~~gd~~~~--~---p~--~D~~~l~ 131 (135)
..+|||||||+|..+..+++. .|+.+ ++++|+ |.+++.|+.. ++|+++.+|..+. + +. .|++++.
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~-V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d 159 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQ-VIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFID 159 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCE-EEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCE-EEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEEC
Confidence 469999999999999999998 78888 999999 8888888643 6899999999773 2 22 4988764
No 136
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.63 E-value=3e-08 Score=71.65 Aligned_cols=67 Identities=15% Similarity=0.175 Sum_probs=55.1
Q ss_pred CC-CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCC---CCC--CcEE
Q 032721 63 FK-GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS---IPA--ADAI 128 (135)
Q Consensus 63 ~~-~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~---~p~--~D~~ 128 (135)
.. +..+|+|+|||+|.++..++++.+. + ++++|+ |.+++.|+++ ++++++.+|+.+. ++. .|++
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~-~-v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~I 123 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA-K-IVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIV 123 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC-E-EEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC-c-EEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEE
Confidence 55 5689999999999999999999776 7 999999 8899888653 4799999999764 222 3999
Q ss_pred Eec
Q 032721 129 FMK 131 (135)
Q Consensus 129 ~l~ 131 (135)
++.
T Consensus 124 i~n 126 (259)
T 3lpm_A 124 TCN 126 (259)
T ss_dssp EEC
T ss_pred EEC
Confidence 884
No 137
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.62 E-value=1.8e-07 Score=65.91 Aligned_cols=73 Identities=21% Similarity=0.217 Sum_probs=54.7
Q ss_pred hccCCCCCCcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec-hHHHHhC----CCCCCcEEEecCCCCC-----CCC-
Q 032721 57 LDGYDGFKGVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDL-PEVVAEA----PSIPGVTHIGGDMFKS-----IPA- 124 (135)
Q Consensus 57 ~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~-p~~~~~a----~~~~rv~~~~gd~~~~-----~p~- 124 (135)
++.++ ..+..+|+|+|||+|.++..+++.. |..+ ++++|. +.+++.+ +..++++++.+|+.+. .+.
T Consensus 66 l~~~~-~~~~~~vLDlG~G~G~~~~~la~~~~~~~~-v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 143 (227)
T 1g8a_A 66 LKNFP-IKPGKSVLYLGIASGTTASHVSDIVGWEGK-IFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPK 143 (227)
T ss_dssp CCCCC-CCTTCEEEEETTTSTTHHHHHHHHHCTTSE-EEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCC
T ss_pred HHhcC-CCCCCEEEEEeccCCHHHHHHHHHhCCCeE-EEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCC
Confidence 33443 5556799999999999999999885 5567 999999 7655543 4447899999999763 233
Q ss_pred CcEEEec
Q 032721 125 ADAIFMK 131 (135)
Q Consensus 125 ~D~~~l~ 131 (135)
.|++++.
T Consensus 144 ~D~v~~~ 150 (227)
T 1g8a_A 144 VDVIFED 150 (227)
T ss_dssp EEEEEEC
T ss_pred ceEEEEC
Confidence 4998864
No 138
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.62 E-value=4.4e-08 Score=72.94 Aligned_cols=80 Identities=18% Similarity=0.260 Sum_probs=62.5
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCC-CCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCC-
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPF-ICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIP- 123 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~-l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p- 123 (135)
...+++.++ ..+..+|+|||||+|.++..+++..+. .+ ++++|+ +.+++.|+++ ++++++.+|+.+..+
T Consensus 64 ~~~l~~~l~-~~~~~~VLDiGcG~G~~~~~la~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~ 141 (317)
T 1dl5_A 64 MALFMEWVG-LDKGMRVLEIGGGTGYNAAVMSRVVGEKGL-VVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE 141 (317)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHHHhcC-CCCcCEEEEecCCchHHHHHHHHhcCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc
Confidence 344555565 556689999999999999999999884 77 999999 8888887643 569999999976543
Q ss_pred -C-CcEEEecccC
Q 032721 124 -A-ADAIFMKVHH 134 (135)
Q Consensus 124 -~-~D~~~l~~vl 134 (135)
. .|++++...+
T Consensus 142 ~~~fD~Iv~~~~~ 154 (317)
T 1dl5_A 142 FSPYDVIFVTVGV 154 (317)
T ss_dssp GCCEEEEEECSBB
T ss_pred CCCeEEEEEcCCH
Confidence 2 3999987653
No 139
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.62 E-value=1.7e-08 Score=75.65 Aligned_cols=64 Identities=20% Similarity=0.196 Sum_probs=54.4
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC---CCC--CcEEEec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS---IPA--ADAIFMK 131 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~---~p~--~D~~~l~ 131 (135)
.+|||||||+|.++..+++.+|+.+ ++++|+ |.+++.|+++ +|++++.+|..+. .+. .|+|++.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~-v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSR-NTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRD 166 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCE-EEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEEC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcE-EEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEEC
Confidence 4999999999999999999999998 999999 9999988642 6899999998653 332 3999874
No 140
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.62 E-value=3.4e-08 Score=73.17 Aligned_cols=65 Identities=18% Similarity=0.211 Sum_probs=52.7
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC-----------CCCcEEEecCCCCCCC---C-CcEE
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS-----------IPGVTHIGGDMFKSIP---A-ADAI 128 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~-----------~~rv~~~~gd~~~~~p---~-~D~~ 128 (135)
+..+|||||||+|.++.++++..|..+ ++++|+ |.+++.|++ .+|++++.+|.++.++ . .|+|
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~-V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVES-ITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCE-EEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 457999999999999999999777777 999999 989988754 2589999999877643 2 3999
Q ss_pred Ee
Q 032721 129 FM 130 (135)
Q Consensus 129 ~l 130 (135)
++
T Consensus 162 i~ 163 (294)
T 3adn_A 162 IS 163 (294)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 141
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.61 E-value=2.4e-08 Score=70.70 Aligned_cols=67 Identities=19% Similarity=0.148 Sum_probs=54.3
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCC-CCC-CcEEEecc-cC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPA-ADAIFMKV-HH 134 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~-~p~-~D~~~l~~-vl 134 (135)
+..+|+|||||+|.++..+++. ..+ ++++|+ +.+++.+++. .+++++.+|+.+. .+. .|++++.+ +|
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~-~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l 112 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKN-TWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDST 112 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSE-EEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCc-EEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCccc
Confidence 4479999999999999999988 356 999999 8899888653 2799999999654 343 39999886 54
No 142
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.61 E-value=4.5e-08 Score=73.87 Aligned_cols=76 Identities=16% Similarity=0.021 Sum_probs=61.4
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC-CC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-IP 123 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~-~p 123 (135)
+..++.... +.+..+|+|+|||+|.++.+++... |+.+ ++++|+ |.+++.|+++ ++++++.+|+.+- .+
T Consensus 192 a~~l~~~~~-~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~-v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~ 269 (354)
T 3tma_A 192 AQALLRLAD-ARPGMRVLDPFTGSGTIALEAASTLGPTSP-VYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRF 269 (354)
T ss_dssp HHHHHHHTT-CCTTCCEEESSCTTSHHHHHHHHHHCTTSC-EEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGT
T ss_pred HHHHHHHhC-CCCCCEEEeCCCCcCHHHHHHHHhhCCCce-EEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccc
Confidence 344555555 7777899999999999999999988 8889 999999 9999988754 3799999999764 22
Q ss_pred -C-CcEEEe
Q 032721 124 -A-ADAIFM 130 (135)
Q Consensus 124 -~-~D~~~l 130 (135)
. .|++++
T Consensus 270 ~~~~D~Ii~ 278 (354)
T 3tma_A 270 FPEVDRILA 278 (354)
T ss_dssp CCCCSEEEE
T ss_pred cCCCCEEEE
Confidence 2 399887
No 143
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.61 E-value=2.1e-08 Score=73.29 Aligned_cols=79 Identities=11% Similarity=-0.014 Sum_probs=54.3
Q ss_pred cHHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC---CCcEEEecCCCC----CCC
Q 032721 52 FMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI---PGVTHIGGDMFK----SIP 123 (135)
Q Consensus 52 ~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~---~rv~~~~gd~~~----~~p 123 (135)
....+++.++ ..+..+|+|||||+|.++..++++. .+ ++++|+ +.+++.|+++ ..+.....|+-. ..+
T Consensus 33 ~~~~il~~l~-l~~g~~VLDlGcGtG~~a~~La~~g--~~-V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~ 108 (261)
T 3iv6_A 33 DRENDIFLEN-IVPGSTVAVIGASTRFLIEKALERG--AS-VTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELA 108 (261)
T ss_dssp HHHHHHHTTT-CCTTCEEEEECTTCHHHHHHHHHTT--CE-EEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGT
T ss_pred HHHHHHHhcC-CCCcCEEEEEeCcchHHHHHHHhcC--CE-EEEEECCHHHHHHHHHHHHhccceeeeeecccccccccC
Confidence 3455666666 6667899999999999999999873 46 999999 8999988754 112222222211 122
Q ss_pred C-CcEEEecccC
Q 032721 124 A-ADAIFMKVHH 134 (135)
Q Consensus 124 ~-~D~~~l~~vl 134 (135)
. .|++++..++
T Consensus 109 ~~fD~Vv~~~~l 120 (261)
T 3iv6_A 109 GHFDFVLNDRLI 120 (261)
T ss_dssp TCCSEEEEESCG
T ss_pred CCccEEEEhhhh
Confidence 2 4999987664
No 144
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.61 E-value=3.1e-08 Score=71.07 Aligned_cols=42 Identities=21% Similarity=0.137 Sum_probs=37.3
Q ss_pred CcceEEeecCCCCHHHHHHHHH--CCCCCeeEEeec-hHHHHhCCC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQK--HPFICEGINFDL-PEVVAEAPS 107 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~--~p~l~~~~~~D~-p~~~~~a~~ 107 (135)
...+|+|+|||+|.++..+++. .|..+ ++++|+ +.+++.|++
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~-v~gvDis~~~l~~A~~ 95 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQ-VIASDVDPAPLELAAK 95 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEE-EEEEESCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCe-EEEEECCHHHHHHHHH
Confidence 4479999999999999999998 77778 999999 999988874
No 145
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.61 E-value=5.6e-08 Score=72.15 Aligned_cols=75 Identities=9% Similarity=0.143 Sum_probs=59.6
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----CCcEEEecCCCCC-CCC--
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS-IPA-- 124 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----~rv~~~~gd~~~~-~p~-- 124 (135)
...+++..+ ..+..+|+|||||+|.++..++++ ..+ ++++|+ +.+++.++++ ++++++.+|+.+- +|.
T Consensus 39 ~~~Iv~~l~-~~~~~~VLEIG~G~G~lT~~La~~--~~~-V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~ 114 (295)
T 3gru_A 39 VNKAVESAN-LTKDDVVLEIGLGKGILTEELAKN--AKK-VYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLD 114 (295)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSE-EEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSC
T ss_pred HHHHHHhcC-CCCcCEEEEECCCchHHHHHHHhc--CCE-EEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCC
Confidence 456667666 666689999999999999999998 345 999999 8888887653 7899999999874 554
Q ss_pred CcEEEec
Q 032721 125 ADAIFMK 131 (135)
Q Consensus 125 ~D~~~l~ 131 (135)
.|+++..
T Consensus 115 fD~Iv~N 121 (295)
T 3gru_A 115 FNKVVAN 121 (295)
T ss_dssp CSEEEEE
T ss_pred ccEEEEe
Confidence 4887743
No 146
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.60 E-value=4.4e-08 Score=69.47 Aligned_cols=69 Identities=16% Similarity=0.193 Sum_probs=56.4
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCC-----CC-CcEEE
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSI-----PA-ADAIF 129 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~-----p~-~D~~~ 129 (135)
.+..+|+|||||+|..+..+++..|..+ ++++|+ +.+++.|+++ .+++++.+|+.+.+ +. .|+++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEAT-IVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCE-EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 3457999999999999999999999888 999999 8888887653 47999999997642 23 39998
Q ss_pred eccc
Q 032721 130 MKVH 133 (135)
Q Consensus 130 l~~v 133 (135)
+...
T Consensus 132 ~~~~ 135 (233)
T 2gpy_A 132 IDAA 135 (233)
T ss_dssp EEGG
T ss_pred ECCC
Confidence 7543
No 147
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.59 E-value=2.1e-08 Score=68.36 Aligned_cols=66 Identities=8% Similarity=-0.034 Sum_probs=52.8
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCC------CC-CcEEE
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSI------PA-ADAIF 129 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~------p~-~D~~~ 129 (135)
+..+|+|+|||+|.++..+++ .+..+ ++++|+ |.+++.++++ ++++++.+|+.+.. +. .|+++
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~-~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVS-RGMDK-SICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHH-TTCSE-EEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCEEEeCCccCHHHHHHHH-cCCCE-EEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 457999999999999999887 45567 999999 8899888753 47999999997642 23 39998
Q ss_pred ecc
Q 032721 130 MKV 132 (135)
Q Consensus 130 l~~ 132 (135)
+..
T Consensus 122 ~~~ 124 (187)
T 2fhp_A 122 LDP 124 (187)
T ss_dssp ECC
T ss_pred ECC
Confidence 764
No 148
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.59 E-value=2.9e-08 Score=68.49 Aligned_cols=69 Identities=17% Similarity=0.167 Sum_probs=54.6
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCC---CCC-CcEEE
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS---IPA-ADAIF 129 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~---~p~-~D~~~ 129 (135)
..+..+|+|+|||+|.++..+++.. |..+ ++++|+ +.+++.|+++ ++++++.+|+.+. .+. .|+++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGR-VFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCE-EEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 3445799999999999999999986 6677 999999 8899888653 5799999997543 223 39988
Q ss_pred ecc
Q 032721 130 MKV 132 (135)
Q Consensus 130 l~~ 132 (135)
+..
T Consensus 99 ~~~ 101 (197)
T 3eey_A 99 FNL 101 (197)
T ss_dssp EEE
T ss_pred EcC
Confidence 653
No 149
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.58 E-value=8.2e-08 Score=71.84 Aligned_cols=98 Identities=15% Similarity=0.152 Sum_probs=67.6
Q ss_pred cccCchHHHHHHHHHhccccc----cHHHHhccCCCCCCcceEEeecCCCCHHHHHHHHH-CCCCCeeEEeec-hHHHHh
Q 032721 31 YGKKPEMNGLMRKAMSGVSVP----FMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQK-HPFICEGINFDL-PEVVAE 104 (135)
Q Consensus 31 ~~~~~~~~~~f~~~m~~~~~~----~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~-~p~l~~~~~~D~-p~~~~~ 104 (135)
+...|.+. .+...|...... ....+++.++ ..+..+|+|+|||+|.++..+++. .|+.+ ++++|+ |.+++.
T Consensus 69 ~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~g~~VLDiG~G~G~~~~~la~~~g~~~~-v~~vD~~~~~~~~ 145 (336)
T 2b25_A 69 MLRRPALE-DYVVLMKRGTAITFPKDINMILSMMD-INPGDTVLEAGSGSGGMSLFLSKAVGSQGR-VISFEVRKDHHDL 145 (336)
T ss_dssp EEECCCHH-HHHHHSCCSSCCCCHHHHHHHHHHHT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCE-EEEEESSHHHHHH
T ss_pred EecCCCHH-HHhhhhcCCCcccCHHHHHHHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHhCCCce-EEEEeCCHHHHHH
Confidence 33455543 344444433222 1344566665 666689999999999999999998 57788 999999 888887
Q ss_pred CCCC-----------------CCcEEEecCCCCC---CCC--CcEEEec
Q 032721 105 APSI-----------------PGVTHIGGDMFKS---IPA--ADAIFMK 131 (135)
Q Consensus 105 a~~~-----------------~rv~~~~gd~~~~---~p~--~D~~~l~ 131 (135)
|+++ .+++++.+|+.+. ++. .|++++.
T Consensus 146 a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 194 (336)
T 2b25_A 146 AKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALD 194 (336)
T ss_dssp HHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-------EEEEEEC
T ss_pred HHHHHHHhhcccccccccccCCceEEEECChHHcccccCCCCeeEEEEC
Confidence 7542 4799999999774 333 4998864
No 150
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.58 E-value=6.2e-08 Score=73.76 Aligned_cols=66 Identities=11% Similarity=0.025 Sum_probs=56.5
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCCC-----CcEEEeccc
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPA-----ADAIFMKVH 133 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p~-----~D~~~l~~v 133 (135)
..+|+|+| |+|.++..+++..|+.+ ++++|+ |.+++.|+++ .+++++.+|+++.+|. .|+|++...
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~-v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKR-IAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSE-EEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 47999999 99999999999988888 999999 9999988754 3899999999886552 499998643
No 151
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.58 E-value=4.3e-08 Score=71.83 Aligned_cols=66 Identities=17% Similarity=-0.032 Sum_probs=54.9
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCCC--CcEEEecc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA--ADAIFMKV 132 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p~--~D~~~l~~ 132 (135)
+..+|+|+|||+|.++..+++..+. + ++++|+ |.+++.|+++ .+++++.+|.++..+. .|++++..
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~-~-V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~ 200 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKA-K-VIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGY 200 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCC-E-EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECC
T ss_pred CCCEEEEecccCCHHHHHHHHhCCC-E-EEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECC
Confidence 3479999999999999999999887 7 999999 8999887653 4699999999876443 49998753
No 152
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.58 E-value=1.4e-07 Score=67.05 Aligned_cols=96 Identities=15% Similarity=0.134 Sum_probs=68.6
Q ss_pred cccCchHHHHHHHHHhccccc----cHHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhC
Q 032721 31 YGKKPEMNGLMRKAMSGVSVP----FMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEA 105 (135)
Q Consensus 31 ~~~~~~~~~~f~~~m~~~~~~----~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a 105 (135)
+...|+........+...+.. ....++...+ ..+..+|+|+|||+|.++..+++. ..+ ++++|+ +.+++.+
T Consensus 54 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~--~~~-v~~vD~~~~~~~~a 129 (248)
T 2yvl_A 54 EVYRPTLEEIILLGFERKTQIIYPKDSFYIALKLN-LNKEKRVLEFGTGSGALLAVLSEV--AGE-VWTFEAVEEFYKTA 129 (248)
T ss_dssp EEECCCHHHHHHHTSCCSSCCCCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSE-EEEECSCHHHHHHH
T ss_pred EEeCCCHHHHHHhcCcCCCCcccchhHHHHHHhcC-CCCCCEEEEeCCCccHHHHHHHHh--CCE-EEEEecCHHHHHHH
Confidence 334555544444444444322 2334555565 666689999999999999999998 567 999998 8888887
Q ss_pred CCC-------CCcEEEecCCCCCC-CC--CcEEEe
Q 032721 106 PSI-------PGVTHIGGDMFKSI-PA--ADAIFM 130 (135)
Q Consensus 106 ~~~-------~rv~~~~gd~~~~~-p~--~D~~~l 130 (135)
+++ ++++++.+|+.+.. +. .|++++
T Consensus 130 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 164 (248)
T 2yvl_A 130 QKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFV 164 (248)
T ss_dssp HHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEE
T ss_pred HHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEE
Confidence 642 57999999998765 53 499986
No 153
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.57 E-value=2.9e-08 Score=67.50 Aligned_cols=74 Identities=18% Similarity=0.122 Sum_probs=58.0
Q ss_pred HhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCC---C
Q 032721 56 VLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP---A 124 (135)
Q Consensus 56 ~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p---~ 124 (135)
+++.++ ..+..+|+|+|||+|.++..+++.. .+ ++++|. +.+++.++++ ++++++.+|+.+.+| .
T Consensus 25 ~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~--~~-v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 100 (192)
T 1l3i_A 25 IMCLAE-PGKNDVAVDVGCGTGGVTLELAGRV--RR-VYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPD 100 (192)
T ss_dssp HHHHHC-CCTTCEEEEESCTTSHHHHHHHTTS--SE-EEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCC
T ss_pred HHHhcC-CCCCCEEEEECCCCCHHHHHHHHhc--CE-EEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCC
Confidence 444444 5556799999999999999999987 56 999999 8888887642 589999999866444 3
Q ss_pred CcEEEeccc
Q 032721 125 ADAIFMKVH 133 (135)
Q Consensus 125 ~D~~~l~~v 133 (135)
.|++++..+
T Consensus 101 ~D~v~~~~~ 109 (192)
T 1l3i_A 101 IDIAVVGGS 109 (192)
T ss_dssp EEEEEESCC
T ss_pred CCEEEECCc
Confidence 499998765
No 154
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.57 E-value=2e-08 Score=70.89 Aligned_cols=67 Identities=13% Similarity=0.209 Sum_probs=54.3
Q ss_pred CcceEEeecCCCCHHHHHHHHHCC-CCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCC---CC------CCc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHP-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS---IP------AAD 126 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p-~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~---~p------~~D 126 (135)
+..+|||||||+|..+..+++..+ +.+ ++.+|+ |.+++.|+++ ++++++.+|..+. ++ ..|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGAR-LLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCE-EEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCE-EEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 457999999999999999999875 677 999999 8999888753 4799999997432 33 249
Q ss_pred EEEecc
Q 032721 127 AIFMKV 132 (135)
Q Consensus 127 ~~~l~~ 132 (135)
++++..
T Consensus 137 ~V~~d~ 142 (221)
T 3u81_A 137 MVFLDH 142 (221)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 998765
No 155
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.57 E-value=1.4e-08 Score=72.24 Aligned_cols=64 Identities=14% Similarity=0.058 Sum_probs=50.4
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCC---CCCC--CcEEEe
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFK---SIPA--ADAIFM 130 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~---~~p~--~D~~~l 130 (135)
+..+|||||||+|.++..+++..+. + ++++|+ +.+++.|++. .+++++.+|+.+ +++. .|++++
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~-~-v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 134 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPID-E-HWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEE-E-EEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCC-e-EEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEE
Confidence 4479999999999999999665443 6 999999 8998887642 579999999854 2443 399987
No 156
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.57 E-value=4.7e-08 Score=73.86 Aligned_cols=66 Identities=23% Similarity=0.195 Sum_probs=52.9
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC-------CCcEEEecCCCCC-CCC--CcEEEecc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS-IPA--ADAIFMKV 132 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~-------~rv~~~~gd~~~~-~p~--~D~~~l~~ 132 (135)
+..+|||||||+|.++..++++ +..+ ++++|+.++++.|++. ++++++.+|+.+. +|. .|+++...
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~-v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~ 141 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARK-VIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEW 141 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSE-EEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECC
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCE-EEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcc
Confidence 3479999999999999999987 5557 9999996577777642 5699999999765 553 49999754
No 157
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.57 E-value=5e-08 Score=72.59 Aligned_cols=66 Identities=21% Similarity=0.166 Sum_probs=54.6
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFK 120 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~ 120 (135)
...+++.++ ..+..+|||+|||+|.++..++++.|+.+ ++++|. |.+++.|+++ ++++++.+||.+
T Consensus 15 l~e~l~~L~-~~~g~~vLD~g~G~G~~s~~la~~~~~~~-VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~ 86 (301)
T 1m6y_A 15 VREVIEFLK-PEDEKIILDCTVGEGGHSRAILEHCPGCR-IIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYRE 86 (301)
T ss_dssp HHHHHHHHC-CCTTCEEEETTCTTSHHHHHHHHHCTTCE-EEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGG
T ss_pred HHHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHCCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHH
Confidence 345566665 55567999999999999999999999878 999999 9999887643 589999999743
No 158
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.56 E-value=1.5e-08 Score=71.27 Aligned_cols=67 Identities=16% Similarity=0.109 Sum_probs=54.3
Q ss_pred CcceEEeecCCCCHHHHHHHHHCC-CCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCC--------C-Cc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHP-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP--------A-AD 126 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p-~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p--------~-~D 126 (135)
+..+|||||||+|..+..+++..| +.+ ++++|+ +.+++.++++ ++++++.+|..+.+| . .|
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGT-LITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCE-EEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 457999999999999999999998 677 999999 8888887643 579999999865422 2 49
Q ss_pred EEEecc
Q 032721 127 AIFMKV 132 (135)
Q Consensus 127 ~~~l~~ 132 (135)
++++..
T Consensus 143 ~v~~~~ 148 (225)
T 3tr6_A 143 LIYIDA 148 (225)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 988653
No 159
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.56 E-value=1.7e-08 Score=73.76 Aligned_cols=77 Identities=14% Similarity=0.065 Sum_probs=57.1
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----------CCcEEEecCCCCC-
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----------PGVTHIGGDMFKS- 121 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----------~rv~~~~gd~~~~- 121 (135)
..+.+.++ ..+..+|||||||+|.++..+++..+ + ++++|+ +.+++.++++ .++.+..+|+.+.
T Consensus 47 ~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 122 (293)
T 3thr_A 47 AWLLGLLR-QHGCHRVLDVACGTGVDSIMLVEEGF--S-VTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD 122 (293)
T ss_dssp HHHHHHHH-HTTCCEEEETTCTTSHHHHHHHHTTC--E-EEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH
T ss_pred HHHHHHhc-ccCCCEEEEecCCCCHHHHHHHHCCC--e-EEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCc
Confidence 33444443 34557999999999999999999844 6 999999 8899887531 5788999998652
Q ss_pred ---CCC--CcEEEec-ccC
Q 032721 122 ---IPA--ADAIFMK-VHH 134 (135)
Q Consensus 122 ---~p~--~D~~~l~-~vl 134 (135)
.+. .|+|++. +++
T Consensus 123 ~~~~~~~~fD~V~~~g~~l 141 (293)
T 3thr_A 123 KDVPAGDGFDAVICLGNSF 141 (293)
T ss_dssp HHSCCTTCEEEEEECTTCG
T ss_pred cccccCCCeEEEEEcChHH
Confidence 232 4999986 554
No 160
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.55 E-value=1.1e-08 Score=73.20 Aligned_cols=64 Identities=14% Similarity=0.058 Sum_probs=49.6
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCC---CCCC--CcEEEe
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFK---SIPA--ADAIFM 130 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~---~~p~--~D~~~l 130 (135)
+..+|||||||+|..+..+++..|. + ++++|+ |.+++.|++. .++.++.+|..+ .+|. -|.+++
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~-~-v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~ 134 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPID-E-HWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEE-E-EEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred CCCeEEEECCCccHHHHHHHHhCCc-E-EEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEE
Confidence 4479999999999999999987775 6 999999 9999988753 468888887632 2443 277754
No 161
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.55 E-value=1.1e-07 Score=71.71 Aligned_cols=77 Identities=17% Similarity=0.122 Sum_probs=56.9
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC-------CCcEEEecCCCCC-CCC-
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS-IPA- 124 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~-------~rv~~~~gd~~~~-~p~- 124 (135)
..+++.+. ..+..+|||||||+|.++..+++. +..+ ++++|..++++.|++. ++++++.+|+.+. +|.
T Consensus 40 ~~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~-V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 116 (348)
T 2y1w_A 40 RAILQNHT-DFKDKIVLDVGCGSGILSFFAAQA-GARK-IYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 116 (348)
T ss_dssp HHHHHTGG-GTTTCEEEEETCTTSHHHHHHHHT-TCSE-EEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHhccc-cCCcCEEEEcCCCccHHHHHHHhC-CCCE-EEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCc
Confidence 34555554 445579999999999999998885 5557 9999995576666532 6899999999764 454
Q ss_pred CcEEEeccc
Q 032721 125 ADAIFMKVH 133 (135)
Q Consensus 125 ~D~~~l~~v 133 (135)
.|+++...+
T Consensus 117 ~D~Ivs~~~ 125 (348)
T 2y1w_A 117 VDIIISEPM 125 (348)
T ss_dssp EEEEEECCC
T ss_pred eeEEEEeCc
Confidence 499997654
No 162
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.55 E-value=5.7e-08 Score=80.67 Aligned_cols=69 Identities=22% Similarity=0.239 Sum_probs=56.4
Q ss_pred CcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec-hHHHHhCCC------------CCCcEEEecCCCCC-CC-C-CcE
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDL-PEVVAEAPS------------IPGVTHIGGDMFKS-IP-A-ADA 127 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~-p~~~~~a~~------------~~rv~~~~gd~~~~-~p-~-~D~ 127 (135)
+..+|||||||+|.++..+++.. |..+ ++++|+ +.+++.|++ ..+++++.+|+.+- .+ . .|+
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~-VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQT-IIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCE-EEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCe-EEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 45799999999999999999998 4457 999999 889988854 15799999999664 22 2 499
Q ss_pred EEecccC
Q 032721 128 IFMKVHH 134 (135)
Q Consensus 128 ~~l~~vl 134 (135)
+++..++
T Consensus 800 VV~~eVL 806 (950)
T 3htx_A 800 GTCLEVI 806 (950)
T ss_dssp EEEESCG
T ss_pred EEEeCch
Confidence 9988765
No 163
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.55 E-value=7.8e-08 Score=69.40 Aligned_cols=67 Identities=19% Similarity=0.239 Sum_probs=55.4
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-CCcEEEecCCCCC-CCC--CcEEEecc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS-IPA--ADAIFMKV 132 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-~rv~~~~gd~~~~-~p~--~D~~~l~~ 132 (135)
+..+|+|||||+|.++..+++..|..+ ++++|+ +.+++.+++. +++.++.+|+.+. ++. .|+++...
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 156 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEIT-TFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIY 156 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSE-EEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeC
Confidence 457999999999999999999988888 999999 8899888754 6799999998543 333 39998654
No 164
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.54 E-value=1.2e-07 Score=66.85 Aligned_cols=67 Identities=15% Similarity=0.117 Sum_probs=54.1
Q ss_pred CCCcceEEeecCC-CCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCC--CCCCCC--CcEEEec
Q 032721 63 FKGVKRLVDVGGS-AGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDM--FKSIPA--ADAIFMK 131 (135)
Q Consensus 63 ~~~~~~vvDvGgG-~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~--~~~~p~--~D~~~l~ 131 (135)
..+..+|+|+||| +|.++..+++.. ..+ ++++|+ +.+++.|+++ .+++++.+|+ +.+++. .|++++.
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~-v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCK-VTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCE-EEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEEC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCE-EEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEEC
Confidence 3456899999999 999999999986 566 999999 8999888753 3799999996 445553 3999865
No 165
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.54 E-value=2.3e-08 Score=73.70 Aligned_cols=66 Identities=11% Similarity=0.138 Sum_probs=54.3
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCC--CCeeEEeec-hHHHHhCCCC--CCcEEEecCCCCC
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPF--ICEGINFDL-PEVVAEAPSI--PGVTHIGGDMFKS 121 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~--l~~~~~~D~-p~~~~~a~~~--~rv~~~~gd~~~~ 121 (135)
..+++..+ ..+..+|+|||||+|.++..++++.+. .+ ++++|+ +.+++.++++ ++++++.+|+++-
T Consensus 32 ~~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~-V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 32 DAIVAAIR-PERGERMVEIGPGLGALTGPVIARLATPGSP-LHAVELDRDLIGRLEQRFGELLELHAGDALTF 102 (279)
T ss_dssp HHHHHHHC-CCTTCEEEEECCTTSTTHHHHHHHHCBTTBC-EEEEECCHHHHHHHHHHHGGGEEEEESCGGGC
T ss_pred HHHHHhcC-CCCcCEEEEEccccHHHHHHHHHhCCCcCCe-EEEEECCHHHHHHHHHhcCCCcEEEECChhcC
Confidence 44666665 556689999999999999999998765 66 999999 8899888764 6899999999764
No 166
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.54 E-value=8.2e-08 Score=69.52 Aligned_cols=77 Identities=21% Similarity=0.311 Sum_probs=58.6
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC--CCcEEEecCCCCC-CCC--Cc
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI--PGVTHIGGDMFKS-IPA--AD 126 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~--~rv~~~~gd~~~~-~p~--~D 126 (135)
...+++..+ ..+..+|+|||||+|.++..++++ +..+ ++++|+ +.+++.++++ .+++++.+|+.+- ++. .+
T Consensus 20 ~~~iv~~~~-~~~~~~VLDiG~G~G~lt~~L~~~-~~~~-v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~ 96 (249)
T 3ftd_A 20 LKKIAEELN-IEEGNTVVEVGGGTGNLTKVLLQH-PLKK-LYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKE 96 (249)
T ss_dssp HHHHHHHTT-CCTTCEEEEEESCHHHHHHHHTTS-CCSE-EEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSS
T ss_pred HHHHHHhcC-CCCcCEEEEEcCchHHHHHHHHHc-CCCe-EEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCC
Confidence 345666665 656679999999999999999987 4456 999999 8899888764 5799999999764 343 14
Q ss_pred EEEecc
Q 032721 127 AIFMKV 132 (135)
Q Consensus 127 ~~~l~~ 132 (135)
..++.|
T Consensus 97 ~~vv~N 102 (249)
T 3ftd_A 97 LKVVGN 102 (249)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 455544
No 167
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.53 E-value=5.5e-08 Score=67.42 Aligned_cols=68 Identities=12% Similarity=0.014 Sum_probs=52.0
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCC-CCC--CcEEEecccC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPA--ADAIFMKVHH 134 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~-~p~--~D~~~l~~vl 134 (135)
+..+|+|+|||+|.++..++.. +..+ ++++|. +.+++.+++. .+++++.+|+.+. +|. .|++++.+++
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~-~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVE-DGYK-TYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHH-TTCE-EEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred CCCEEEEECCCCCHHHHHHHHh-CCCE-EEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChH
Confidence 3479999999999985555544 4567 999999 8898887653 5799999999663 443 3999987664
No 168
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.53 E-value=4.1e-08 Score=72.80 Aligned_cols=74 Identities=16% Similarity=0.268 Sum_probs=53.6
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC-CCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS-IPA 124 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~-~p~ 124 (135)
...+++..+ ..+..+|+|||||+|.++..++++ ..+ ++++|+ +.+++.++++ ++++++.+|+.+. .+.
T Consensus 31 ~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~La~~--~~~-v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~~ 106 (299)
T 2h1r_A 31 LDKIIYAAK-IKSSDIVLEIGCGTGNLTVKLLPL--AKK-VITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFPK 106 (299)
T ss_dssp HHHHHHHHC-CCTTCEEEEECCTTSTTHHHHTTT--SSE-EEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCCC
T ss_pred HHHHHHhcC-CCCcCEEEEEcCcCcHHHHHHHhc--CCE-EEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCccc
Confidence 445666565 556679999999999999999987 345 999999 8888877642 6899999999764 344
Q ss_pred CcEEEe
Q 032721 125 ADAIFM 130 (135)
Q Consensus 125 ~D~~~l 130 (135)
.|+++.
T Consensus 107 ~D~Vv~ 112 (299)
T 2h1r_A 107 FDVCTA 112 (299)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 598876
No 169
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.53 E-value=5.2e-08 Score=66.98 Aligned_cols=66 Identities=12% Similarity=0.023 Sum_probs=52.4
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC---C-CC-CcEEEecc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS---I-PA-ADAIFMKV 132 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~---~-p~-~D~~~l~~ 132 (135)
+..+|+|+|||+|.++..+++. +..+ ++++|+ +.+++.++++ ++++++.+|+.+. . +. .|++++..
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~-~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR-GAAS-VLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSE-EEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCEEEEeCCCcCHHHHHHHHC-CCCe-EEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 3478999999999999988774 5556 999999 9999988754 5899999998654 2 22 49998853
No 170
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.53 E-value=2.8e-08 Score=70.68 Aligned_cols=66 Identities=21% Similarity=0.212 Sum_probs=53.6
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCCC--CcEEEeccc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA--ADAIFMKVH 133 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p~--~D~~~l~~v 133 (135)
...+|+|+|||+|.++..+++.. .+ ++++|+ |.+++.++++ ++++++.+|+.+..+. .|++++...
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~ 153 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MR-VIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPP 153 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CE-EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCC
T ss_pred CCCEEEECccccCHHHHHHHHcC--CE-EEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCC
Confidence 34799999999999999999974 66 999999 8999888653 4799999999664332 499987644
No 171
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.53 E-value=7e-08 Score=70.82 Aligned_cols=64 Identities=11% Similarity=0.034 Sum_probs=51.4
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC---CCcEEEecCCCCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI---PGVTHIGGDMFKS 121 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~---~rv~~~~gd~~~~ 121 (135)
...+++..+ ..+. +|+|||||+|.++..++++. .+ ++++|+ +.+++.++++ .+++++.+|+++-
T Consensus 36 ~~~Iv~~~~-~~~~-~VLEIG~G~G~lt~~L~~~~--~~-V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~ 103 (271)
T 3fut_A 36 LRRIVEAAR-PFTG-PVFEVGPGLGALTRALLEAG--AE-VTAIEKDLRLRPVLEETLSGLPVRLVFQDALLY 103 (271)
T ss_dssp HHHHHHHHC-CCCS-CEEEECCTTSHHHHHHHHTT--CC-EEEEESCGGGHHHHHHHTTTSSEEEEESCGGGS
T ss_pred HHHHHHhcC-CCCC-eEEEEeCchHHHHHHHHHcC--CE-EEEEECCHHHHHHHHHhcCCCCEEEEECChhhC
Confidence 345666665 5555 99999999999999999985 46 999999 8888877542 6899999999764
No 172
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.52 E-value=6.6e-09 Score=73.35 Aligned_cols=68 Identities=9% Similarity=0.064 Sum_probs=54.4
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCC-CCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCC--------C-
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHP-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP--------A- 124 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p-~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p--------~- 124 (135)
..+..+|+|||||+|..+..+++..| ..+ ++++|+ |.+++.++++ ++++++.+|..+.++ .
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~ 145 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGR-VVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGT 145 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCE-EEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCC
Confidence 34457999999999999999999987 667 999999 8888887642 589999999865421 2
Q ss_pred CcEEEec
Q 032721 125 ADAIFMK 131 (135)
Q Consensus 125 ~D~~~l~ 131 (135)
.|++++.
T Consensus 146 ~D~v~~d 152 (229)
T 2avd_A 146 FDVAVVD 152 (229)
T ss_dssp EEEEEEC
T ss_pred ccEEEEC
Confidence 4988875
No 173
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.52 E-value=1.3e-07 Score=65.66 Aligned_cols=64 Identities=17% Similarity=0.185 Sum_probs=52.1
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCC-CeeEEeec-hHHHHhCCCC-CCcEEEecCCCCC-CCC--CcEEEecccC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFI-CEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS-IPA--ADAIFMKVHH 134 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l-~~~~~~D~-p~~~~~a~~~-~rv~~~~gd~~~~-~p~--~D~~~l~~vl 134 (135)
+..+|+|||||+|.++..+ .. + ++++|+ +.+++.+++. ++++++.+|+.+. .+. .|++++.+++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 105 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQ-KVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTL 105 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSE-EEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCT
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCe-EEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChh
Confidence 4579999999999999887 44 6 999999 8899888764 6899999998653 343 3999998875
No 174
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.52 E-value=6.1e-08 Score=70.81 Aligned_cols=68 Identities=15% Similarity=-0.023 Sum_probs=56.7
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCCC---CcEEEecc
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPA---ADAIFMKV 132 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p~---~D~~~l~~ 132 (135)
+.+..+|+|+|||+|.++..+++..+..+ ++++|+ |.+++.|+++ ++++++.+|.++. |. .|++++..
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~-V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~~~~~D~Vi~d~ 194 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKL-VYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-ELKDVADRVIMGY 194 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSE-EEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CCTTCEEEEEECC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-CccCCceEEEECC
Confidence 34557999999999999999999988778 999999 9999888753 5789999999775 42 49998753
No 175
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.51 E-value=2.1e-07 Score=62.19 Aligned_cols=73 Identities=19% Similarity=0.239 Sum_probs=53.8
Q ss_pred HhccCCCCCCcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeechHHHHhCCCCCCcEEEecCCCCC---------CCC-
Q 032721 56 VLDGYDGFKGVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKS---------IPA- 124 (135)
Q Consensus 56 ~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~p~~~~~a~~~~rv~~~~gd~~~~---------~p~- 124 (135)
+++.+....+..+|+|+|||+|.++..+++.+ |+.+ ++++|+.++++ .++++++.+|+.+. ++.
T Consensus 13 ~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~-v~~~D~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 13 IQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGR-IIACDLLPMDP----IVGVDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp HHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCE-EEEEESSCCCC----CTTEEEEESCTTSHHHHHHHHHHHTTC
T ss_pred HHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCe-EEEEECccccc----cCcEEEEEcccccchhhhhhhccCCCC
Confidence 44444313445799999999999999999995 6778 99999944332 27899999999764 443
Q ss_pred -CcEEEeccc
Q 032721 125 -ADAIFMKVH 133 (135)
Q Consensus 125 -~D~~~l~~v 133 (135)
.|++++...
T Consensus 88 ~~D~i~~~~~ 97 (180)
T 1ej0_A 88 KVQVVMSDMA 97 (180)
T ss_dssp CEEEEEECCC
T ss_pred ceeEEEECCC
Confidence 399988544
No 176
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.51 E-value=1.6e-07 Score=71.88 Aligned_cols=73 Identities=16% Similarity=0.179 Sum_probs=57.7
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCCCCC--CcEE
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPA--ADAI 128 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~~p~--~D~~ 128 (135)
+..+++.++ ..+..+|+|+|||+|.++.++++++ +..+ ++++|+ |.+++.| .+++++.+|+++..+. .|++
T Consensus 28 ~~~~~~~~~-~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~-i~gvDi~~~~~~~a---~~~~~~~~D~~~~~~~~~fD~I 102 (421)
T 2ih2_A 28 VDFMVSLAE-APRGGRVLEPACAHGPFLRAFREAHGTAYR-FVGVEIDPKALDLP---PWAEGILADFLLWEPGEAFDLI 102 (421)
T ss_dssp HHHHHHHCC-CCTTCEEEEETCTTCHHHHHHHHHHCSCSE-EEEEESCTTTCCCC---TTEEEEESCGGGCCCSSCEEEE
T ss_pred HHHHHHhhc-cCCCCEEEECCCCChHHHHHHHHHhCCCCe-EEEEECCHHHHHhC---CCCcEEeCChhhcCccCCCCEE
Confidence 344555554 3344699999999999999999987 5677 999999 8888877 6899999999876443 4999
Q ss_pred Ee
Q 032721 129 FM 130 (135)
Q Consensus 129 ~l 130 (135)
+.
T Consensus 103 i~ 104 (421)
T 2ih2_A 103 LG 104 (421)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 177
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.51 E-value=1e-07 Score=69.38 Aligned_cols=69 Identities=16% Similarity=0.077 Sum_probs=54.4
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCC-C-CC--CcEEEec
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-I-PA--ADAIFMK 131 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~-~-p~--~D~~~l~ 131 (135)
.+..+|||||||+|.++..+++. +..+ ++++|+ +.+++.+++. .+++++.+|+.+. + +. .|++++.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GIGE-YYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TCSE-EEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CCCE-EEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC
Confidence 34579999999999999998776 4557 999999 8888887643 4689999999764 4 33 3999987
Q ss_pred ccC
Q 032721 132 VHH 134 (135)
Q Consensus 132 ~vl 134 (135)
.++
T Consensus 141 ~~l 143 (298)
T 1ri5_A 141 FSF 143 (298)
T ss_dssp SCG
T ss_pred chh
Confidence 664
No 178
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.51 E-value=3.6e-08 Score=68.80 Aligned_cols=66 Identities=12% Similarity=0.062 Sum_probs=51.5
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC--------CCcEEEecCCCCCCC-----C-CcEEEe
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI--------PGVTHIGGDMFKSIP-----A-ADAIFM 130 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~--------~rv~~~~gd~~~~~p-----~-~D~~~l 130 (135)
..+|||+|||+|.++..++++.. .+ ++++|+ |.+++.|+++ ++++++.+|+.+..+ . .|++++
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~-~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQA-KK-VTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC-SE-EEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCeEEEcCCccCHHHHHHHHccC-CE-EEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 36899999999999998877643 46 999999 8999888653 479999999865322 3 588887
Q ss_pred ccc
Q 032721 131 KVH 133 (135)
Q Consensus 131 ~~v 133 (135)
...
T Consensus 132 ~~~ 134 (201)
T 2ift_A 132 DPP 134 (201)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 179
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.49 E-value=1.5e-07 Score=71.73 Aligned_cols=74 Identities=19% Similarity=0.146 Sum_probs=55.3
Q ss_pred HhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC-------CCcEEEecCCCCC-CCC-Cc
Q 032721 56 VLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS-IPA-AD 126 (135)
Q Consensus 56 ~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~-------~rv~~~~gd~~~~-~p~-~D 126 (135)
+..... ..+..+|||||||+|.++..++++. ..+ ++++|...+++.|++. ++++++.+|+.+. +|. .|
T Consensus 55 i~~~~~-~~~~~~VLDlGcGtG~ls~~la~~g-~~~-V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D 131 (376)
T 3r0q_C 55 VFQNKH-HFEGKTVLDVGTGSGILAIWSAQAG-ARK-VYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVD 131 (376)
T ss_dssp HHTTTT-TTTTCEEEEESCTTTHHHHHHHHTT-CSE-EEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEE
T ss_pred HHhccc-cCCCCEEEEeccCcCHHHHHHHhcC-CCE-EEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcce
Confidence 434443 4455899999999999999999873 336 9999997777766542 5699999999664 454 49
Q ss_pred EEEecc
Q 032721 127 AIFMKV 132 (135)
Q Consensus 127 ~~~l~~ 132 (135)
++++..
T Consensus 132 ~Iv~~~ 137 (376)
T 3r0q_C 132 VIISEW 137 (376)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 998754
No 180
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.49 E-value=6.5e-08 Score=70.90 Aligned_cols=66 Identities=24% Similarity=0.316 Sum_probs=53.7
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC----------CCCcEEEecCCCCCC---CC-CcEEE
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS----------IPGVTHIGGDMFKSI---PA-ADAIF 129 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~----------~~rv~~~~gd~~~~~---p~-~D~~~ 129 (135)
+..+|+|||||+|.++.++++..|..+ ++++|+ |.+++.|++ .+|++++.+|.++.+ +. .|+++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKK-ATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSE-EEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCce-EEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 347999999999999999998767777 999999 999888753 268999999987543 23 39988
Q ss_pred ec
Q 032721 130 MK 131 (135)
Q Consensus 130 l~ 131 (135)
+.
T Consensus 154 ~d 155 (275)
T 1iy9_A 154 VD 155 (275)
T ss_dssp ES
T ss_pred EC
Confidence 74
No 181
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.48 E-value=5.4e-08 Score=70.77 Aligned_cols=65 Identities=14% Similarity=0.174 Sum_probs=52.8
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----CCcEEEecCCCCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS 121 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----~rv~~~~gd~~~~ 121 (135)
...+++..+ ..+..+|+|||||+|.++..++++. .+ ++++|+ +.+++.++++ ++++++.+|+++-
T Consensus 18 ~~~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~--~~-V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 18 LQKIVSAIH-PQKTDTLVEIGPGRGALTDYLLTEC--DN-LALVEIDRDLVAFLQKKYNQQKNITIYQNDALQF 87 (255)
T ss_dssp HHHHHHHHC-CCTTCEEEEECCTTTTTHHHHTTTS--SE-EEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTC
T ss_pred HHHHHHhcC-CCCcCEEEEEcccccHHHHHHHHhC--CE-EEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhC
Confidence 345666665 6666799999999999999999875 45 999999 8888887643 6899999999774
No 182
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.48 E-value=3.8e-08 Score=66.03 Aligned_cols=66 Identities=15% Similarity=0.045 Sum_probs=53.0
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----C-CcEEEecCCCCCCC-------CCcEEEec
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----P-GVTHIGGDMFKSIP-------AADAIFMK 131 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----~-rv~~~~gd~~~~~p-------~~D~~~l~ 131 (135)
+..+|+|+|||+|.++..+++..++ ++++|+ +.+++.++++ . +++++.+|+.+..+ ..|++++.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 3478999999999999999998654 899999 8899888753 2 79999999876432 35999886
Q ss_pred cc
Q 032721 132 VH 133 (135)
Q Consensus 132 ~v 133 (135)
..
T Consensus 118 ~~ 119 (171)
T 1ws6_A 118 PP 119 (171)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 183
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.47 E-value=2.4e-07 Score=68.48 Aligned_cols=68 Identities=16% Similarity=0.060 Sum_probs=53.1
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------------CCcEEEecCCCCC-----C--C
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------------PGVTHIGGDMFKS-----I--P 123 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------------~rv~~~~gd~~~~-----~--p 123 (135)
+..+|+|||||+|.++..+++ .+..+ ++++|+ +.+++.+++. .+++++.+|+.+. + +
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~-~~~~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKK-GRINK-LVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHH-TTCSE-EEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCEEEEECCCCcHHHHHHHh-cCCCE-EEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 457999999999999999988 45667 999999 8888877642 2689999999764 2 2
Q ss_pred C--CcEEEecccC
Q 032721 124 A--ADAIFMKVHH 134 (135)
Q Consensus 124 ~--~D~~~l~~vl 134 (135)
. .|++++..+|
T Consensus 112 ~~~fD~V~~~~~l 124 (313)
T 3bgv_A 112 QMCFDICSCQFVC 124 (313)
T ss_dssp TCCEEEEEEETCG
T ss_pred CCCEEEEEEecch
Confidence 2 3999987664
No 184
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.47 E-value=1.2e-07 Score=67.01 Aligned_cols=70 Identities=20% Similarity=0.220 Sum_probs=55.8
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCC------CCeeEEeec-hHHHHhCCCC-----------CCcEEEecCCCCCCCC
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPF------ICEGINFDL-PEVVAEAPSI-----------PGVTHIGGDMFKSIPA 124 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~------l~~~~~~D~-p~~~~~a~~~-----------~rv~~~~gd~~~~~p~ 124 (135)
..+..+|+|||||+|.++..+++..+. .+ ++++|+ +.+++.++++ ++++++.+|..+.+|.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 160 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTR-IVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP 160 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCE-EEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCE-EEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc
Confidence 344579999999999999999987653 57 999999 8888887642 4799999999776553
Q ss_pred ---CcEEEeccc
Q 032721 125 ---ADAIFMKVH 133 (135)
Q Consensus 125 ---~D~~~l~~v 133 (135)
.|++++...
T Consensus 161 ~~~fD~I~~~~~ 172 (227)
T 1r18_A 161 NAPYNAIHVGAA 172 (227)
T ss_dssp GCSEEEEEECSC
T ss_pred CCCccEEEECCc
Confidence 399987654
No 185
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.47 E-value=2.9e-07 Score=63.80 Aligned_cols=65 Identities=18% Similarity=0.105 Sum_probs=52.2
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----C-CcEEEecCCCCCCCC-CcEEEecc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----P-GVTHIGGDMFKSIPA-ADAIFMKV 132 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----~-rv~~~~gd~~~~~p~-~D~~~l~~ 132 (135)
+..+|+|+|||+|.++..+++..+ .+ ++++|+ |.+++.++++ . +++++.+|+.+ +|. .|++++.-
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~-~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~D~v~~~~ 120 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGA-KE-VICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-FNSRVDIVIMNP 120 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-SE-EEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-CCCCCSEEEECC
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCC-CE-EEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH-cCCCCCEEEEcC
Confidence 447999999999999999998743 36 999999 8898887653 2 79999999966 554 59998753
No 186
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.47 E-value=1.8e-07 Score=67.70 Aligned_cols=65 Identities=9% Similarity=-0.003 Sum_probs=54.1
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCCC-CC-CcEEEec
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKSI-PA-ADAIFMK 131 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~~-p~-~D~~~l~ 131 (135)
+....+|+|||||+|-++..+. |..+ ++++|+ +.+++.++.. .+.++..+|+.... |. +|++++-
T Consensus 103 ~~~p~~VLDlGCG~gpLal~~~---~~~~-y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLll 175 (253)
T 3frh_A 103 AETPRRVLDIACGLNPLALYER---GIAS-VWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIF 175 (253)
T ss_dssp SCCCSEEEEETCTTTHHHHHHT---TCSE-EEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEE
T ss_pred CCCCCeEEEecCCccHHHHHhc---cCCe-EEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHH
Confidence 3456899999999999999888 8888 999999 9999988753 66889999998774 44 5999775
No 187
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.46 E-value=1.3e-07 Score=70.76 Aligned_cols=66 Identities=20% Similarity=0.256 Sum_probs=51.7
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC-------CCcEEEecCCCCC-CC-C-CcEEEecc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI-------PGVTHIGGDMFKS-IP-A-ADAIFMKV 132 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~-------~rv~~~~gd~~~~-~p-~-~D~~~l~~ 132 (135)
+..+|+|||||+|.++..++++ +..+ ++++|..++++.|++. ++++++.+|+.+. +| . .|+++...
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~-v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~ 113 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKH-VIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEW 113 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSE-EEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECC
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCE-EEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeC
Confidence 3469999999999999998886 4456 9999996677776542 5799999999764 55 3 49999764
No 188
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.46 E-value=2.9e-07 Score=64.77 Aligned_cols=70 Identities=19% Similarity=0.163 Sum_probs=55.7
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHC-----CCCCeeEEeec-hHHHHhCCCC-----------CCcEEEecCCCCCC---
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKH-----PFICEGINFDL-PEVVAEAPSI-----------PGVTHIGGDMFKSI--- 122 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~-----p~l~~~~~~D~-p~~~~~a~~~-----------~rv~~~~gd~~~~~--- 122 (135)
..+..+|+|||||+|.++..+++.. |..+ ++++|+ +.+++.|+++ .+++++.+|..+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSY-VIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCE-EEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCE-EEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 4445799999999999999999987 5667 999999 8888887642 47999999997654
Q ss_pred -C---CCcEEEeccc
Q 032721 123 -P---AADAIFMKVH 133 (135)
Q Consensus 123 -p---~~D~~~l~~v 133 (135)
+ ..|++++...
T Consensus 157 ~~~~~~fD~I~~~~~ 171 (227)
T 2pbf_A 157 KKELGLFDAIHVGAS 171 (227)
T ss_dssp HHHHCCEEEEEECSB
T ss_pred CccCCCcCEEEECCc
Confidence 2 2499987654
No 189
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.46 E-value=2.5e-07 Score=63.88 Aligned_cols=61 Identities=13% Similarity=0.079 Sum_probs=50.4
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCC-CCC--CcEEEec
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS-IPA--ADAIFMK 131 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~-~p~--~D~~~l~ 131 (135)
+|+|||||+|.++..+++. ..+ ++++|+ +.+++.+++. .+++++.+|+.+. +|. .|++++.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 101 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYE-VTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI 101 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCE-EEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE
T ss_pred CEEEECCCCCHhHHHHHhC--CCe-EEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE
Confidence 9999999999999999986 457 999999 8898888653 3799999999765 443 4999875
No 190
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.45 E-value=2.5e-08 Score=71.70 Aligned_cols=66 Identities=17% Similarity=0.156 Sum_probs=53.7
Q ss_pred CcceEEeecCCCCHHHHHHHHHCC-CCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCC--------C-Cc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHP-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIP--------A-AD 126 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p-~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p--------~-~D 126 (135)
+..+|||||||+|..+..+++..| +.+ ++.+|+ |.+++.|+++ ++|+++.+|..+.++ . .|
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~-v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQ-VITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCE-EEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 457999999999999999999987 677 999999 8888777643 589999999865422 3 39
Q ss_pred EEEec
Q 032721 127 AIFMK 131 (135)
Q Consensus 127 ~~~l~ 131 (135)
++++.
T Consensus 139 ~V~~d 143 (242)
T 3r3h_A 139 FIFID 143 (242)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 98874
No 191
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.45 E-value=4.7e-07 Score=62.85 Aligned_cols=61 Identities=28% Similarity=0.409 Sum_probs=46.4
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCCCCcEEEecCCCCC
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKS 121 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~~rv~~~~gd~~~~ 121 (135)
.++.+.+..+.+..+|||+|||+|.++..++++ ..+ ++++|+.++ ...++++++.+|+.+.
T Consensus 14 ~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~--~~~-V~gvD~~~~----~~~~~v~~~~~D~~~~ 74 (191)
T 3dou_A 14 EFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL--ARK-IISIDLQEM----EEIAGVRFIRCDIFKE 74 (191)
T ss_dssp HHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT--CSE-EEEEESSCC----CCCTTCEEEECCTTSS
T ss_pred HHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc--CCc-EEEEecccc----ccCCCeEEEEccccCH
Confidence 345555542455689999999999999999988 556 999999432 2236899999999764
No 192
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.45 E-value=1.3e-07 Score=71.96 Aligned_cols=68 Identities=13% Similarity=-0.029 Sum_probs=56.0
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCC-CC-C-CcEEEec
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IP-A-ADAIFMK 131 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~-~p-~-~D~~~l~ 131 (135)
+.+..+|+|+|||+|.++..++...+..+ ++++|+ +.+++.|+++ ++++++.+|+.+- .+ . .|++++.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~-v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~n 293 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGE-IIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISN 293 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSC-EEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEEC
Confidence 34557999999999999999999988778 999999 9999988754 4799999999764 33 2 3998873
No 193
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.44 E-value=3.8e-08 Score=68.71 Aligned_cols=66 Identities=18% Similarity=0.117 Sum_probs=53.6
Q ss_pred CcceEEeecCCCCHHHHHHHHHCC-CCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCCC---CcEEEec
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHP-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA---ADAIFMK 131 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p-~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p~---~D~~~l~ 131 (135)
+..+|+|||||+|..+..+++..| +.+ ++++|+ +.+++.|+++ ++++++.+|..+.+|. .|++++.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 133 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSR-VVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMD 133 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCE-EEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEc
Confidence 447999999999999999999988 677 999999 8899888753 4799999998654332 5888753
No 194
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.44 E-value=1.8e-07 Score=72.54 Aligned_cols=71 Identities=14% Similarity=0.215 Sum_probs=55.3
Q ss_pred HhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCC-----
Q 032721 56 VLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIP----- 123 (135)
Q Consensus 56 ~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p----- 123 (135)
+++.++ ..+..+|+|+|||+|.++..+++. ..+ ++++|. +.+++.|+++ ++++++.+|+.+.++
T Consensus 278 ~~~~l~-~~~~~~VLDlgcG~G~~~~~la~~--~~~-V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~ 353 (433)
T 1uwv_A 278 ALEWLD-VQPEDRVLDLFCGMGNFTLPLATQ--AAS-VVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWA 353 (433)
T ss_dssp HHHHHT-CCTTCEEEEESCTTTTTHHHHHTT--SSE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGG
T ss_pred HHHhhc-CCCCCEEEECCCCCCHHHHHHHhh--CCE-EEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhh
Confidence 334443 445579999999999999999987 456 999999 8999888753 579999999987532
Q ss_pred --CCcEEEe
Q 032721 124 --AADAIFM 130 (135)
Q Consensus 124 --~~D~~~l 130 (135)
..|++++
T Consensus 354 ~~~fD~Vv~ 362 (433)
T 1uwv_A 354 KNGFDKVLL 362 (433)
T ss_dssp TTCCSEEEE
T ss_pred cCCCCEEEE
Confidence 2498886
No 195
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.43 E-value=1.3e-07 Score=68.57 Aligned_cols=64 Identities=13% Similarity=0.159 Sum_probs=50.7
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----CCcEEEecCCCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFK 120 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----~rv~~~~gd~~~ 120 (135)
...+++..+ ..+..+|+|||||+|.++. +. +.++.+ ++++|+ +.+++.++++ ++++++.+|+.+
T Consensus 10 ~~~iv~~~~-~~~~~~VLEIG~G~G~lt~-l~-~~~~~~-v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~ 78 (252)
T 1qyr_A 10 IDSIVSAIN-PQKGQAMVEIGPGLAALTE-PV-GERLDQ-LTVIELDRDLAARLQTHPFLGPKLTIYQQDAMT 78 (252)
T ss_dssp HHHHHHHHC-CCTTCCEEEECCTTTTTHH-HH-HTTCSC-EEEECCCHHHHHHHHTCTTTGGGEEEECSCGGG
T ss_pred HHHHHHhcC-CCCcCEEEEECCCCcHHHH-hh-hCCCCe-EEEEECCHHHHHHHHHHhccCCceEEEECchhh
Confidence 345666665 5566799999999999999 64 556666 999999 9999988764 479999999976
No 196
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.43 E-value=4.6e-08 Score=71.52 Aligned_cols=67 Identities=12% Similarity=-0.004 Sum_probs=57.4
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCCCCC--CcEEEecc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKSIPA--ADAIFMKV 132 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~~p~--~D~~~l~~ 132 (135)
...+|+|||||+|-++..+....|..+ ++++|+ +.+++.++.+ .+.++...|+....|. +|++++.-
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~-y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lk 206 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETV-YIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLK 206 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCE-EEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETT
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCE-EEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHH
Confidence 367999999999999999999999999 999999 8899988754 5688999999888553 59997654
No 197
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.43 E-value=3.1e-07 Score=66.94 Aligned_cols=64 Identities=16% Similarity=0.059 Sum_probs=52.9
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----------CCcEEEecCCCCCCCCCcEEEec
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----------PGVTHIGGDMFKSIPAADAIFMK 131 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----------~rv~~~~gd~~~~~p~~D~~~l~ 131 (135)
+..+|+|||||+|.++.++++. + .+ ++++|+ |.+++.|+++ +|++++.+|.++.+...|++++.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~-v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d 146 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-TH-IDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCL 146 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CE-EEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEES
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CE-EEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEEC
Confidence 4479999999999999999988 7 67 999999 9999998763 47999999987645224988864
No 198
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.43 E-value=3.3e-07 Score=70.44 Aligned_cols=77 Identities=8% Similarity=-0.088 Sum_probs=59.9
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCC--------------------------------------CCeeE
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPF--------------------------------------ICEGI 94 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~--------------------------------------l~~~~ 94 (135)
+..++.... |.+...|+|.+||+|.++++.+....+ .+ ++
T Consensus 190 Aa~ll~l~~-~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~-V~ 267 (393)
T 3k0b_A 190 AAALVLLTS-WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLN-II 267 (393)
T ss_dssp HHHHHHHSC-CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC-EE
T ss_pred HHHHHHHhC-CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCce-EE
Confidence 344555555 777789999999999999988876544 56 99
Q ss_pred Eeec-hHHHHhCCCC-------CCcEEEecCCCCCC-CC-CcEEEec
Q 032721 95 NFDL-PEVVAEAPSI-------PGVTHIGGDMFKSI-PA-ADAIFMK 131 (135)
Q Consensus 95 ~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~-p~-~D~~~l~ 131 (135)
++|+ |.+++.|+.+ .+++++.+|+++.. +. .|++++.
T Consensus 268 GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~N 314 (393)
T 3k0b_A 268 GGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVAN 314 (393)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEEC
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEEC
Confidence 9999 9999988753 46999999997753 33 4998875
No 199
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.42 E-value=5.5e-07 Score=62.77 Aligned_cols=67 Identities=13% Similarity=0.029 Sum_probs=48.0
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCCCCcEEEecCCCCC-CCC--CcEEEe
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKS-IPA--ADAIFM 130 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~~rv~~~~gd~~~~-~p~--~D~~~l 130 (135)
..+++.+....+..+|+|||||+|.++..+. .+ ++++|+.+. +++++.+|+.+. ++. .|++++
T Consensus 56 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~-----~~-v~~~D~s~~--------~~~~~~~d~~~~~~~~~~fD~v~~ 121 (215)
T 2zfu_A 56 DRIARDLRQRPASLVVADFGCGDCRLASSIR-----NP-VHCFDLASL--------DPRVTVCDMAQVPLEDESVDVAVF 121 (215)
T ss_dssp HHHHHHHHTSCTTSCEEEETCTTCHHHHHCC-----SC-EEEEESSCS--------STTEEESCTTSCSCCTTCEEEEEE
T ss_pred HHHHHHHhccCCCCeEEEECCcCCHHHHHhh-----cc-EEEEeCCCC--------CceEEEeccccCCCCCCCEeEEEE
Confidence 3444444323445799999999999998873 56 999998322 678889998763 443 399998
Q ss_pred cccC
Q 032721 131 KVHH 134 (135)
Q Consensus 131 ~~vl 134 (135)
.++|
T Consensus 122 ~~~l 125 (215)
T 2zfu_A 122 CLSL 125 (215)
T ss_dssp ESCC
T ss_pred ehhc
Confidence 8775
No 200
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.42 E-value=5.9e-08 Score=67.72 Aligned_cols=65 Identities=8% Similarity=0.070 Sum_probs=51.5
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCC---C-CcEEEecc
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIP---A-ADAIFMKV 132 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p---~-~D~~~l~~ 132 (135)
..+|+|+|||+|.++..++++.. .+ ++++|+ |.+++.|+++ ++++++.+|+.+.+| . .|++++..
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~-~~-V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~ 130 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYA-AG-ATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDP 130 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC-SE-EEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECC
T ss_pred CCeEEEeCCCcCHHHHHHHhcCC-CE-EEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECC
Confidence 36899999999999998887753 26 999999 9999988753 489999999865332 2 49998754
No 201
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.41 E-value=2.9e-07 Score=70.51 Aligned_cols=76 Identities=16% Similarity=0.013 Sum_probs=59.3
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCC--------------------------------------CCeeE
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPF--------------------------------------ICEGI 94 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~--------------------------------------l~~~~ 94 (135)
+..++.... |.+...|+|.+||+|.++++++....+ .+ ++
T Consensus 184 Aa~ll~~~~-~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~-V~ 261 (385)
T 3ldu_A 184 AAGLIYLTP-WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK-IY 261 (385)
T ss_dssp HHHHHHTSC-CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC-EE
T ss_pred HHHHHHhhC-CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce-EE
Confidence 344555555 777789999999999999998876432 56 99
Q ss_pred Eeec-hHHHHhCCCC-------CCcEEEecCCCCCC-CC-CcEEEe
Q 032721 95 NFDL-PEVVAEAPSI-------PGVTHIGGDMFKSI-PA-ADAIFM 130 (135)
Q Consensus 95 ~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~-p~-~D~~~l 130 (135)
++|+ |.+++.|+.+ ++|++..+|+++.. |. .|++++
T Consensus 262 GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~ 307 (385)
T 3ldu_A 262 GYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIIT 307 (385)
T ss_dssp EEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEE
Confidence 9999 9999998764 37999999997753 33 499887
No 202
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.41 E-value=9.2e-08 Score=70.99 Aligned_cols=67 Identities=24% Similarity=0.343 Sum_probs=53.9
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC----------CCCcEEEecCCCCCC---CC--CcE
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS----------IPGVTHIGGDMFKSI---PA--ADA 127 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~----------~~rv~~~~gd~~~~~---p~--~D~ 127 (135)
.+..+|+|||||+|.++..+++..|..+ ++++|+ |.+++.+++ .+|++++.+|..+.. +. .|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEH-CDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCE-EEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 3457999999999999999998777778 999999 888887753 268999999986542 33 399
Q ss_pred EEec
Q 032721 128 IFMK 131 (135)
Q Consensus 128 ~~l~ 131 (135)
|++.
T Consensus 173 Ii~d 176 (304)
T 3bwc_A 173 VIID 176 (304)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 9874
No 203
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.41 E-value=9.9e-08 Score=71.44 Aligned_cols=66 Identities=18% Similarity=0.149 Sum_probs=53.5
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC----------CCCcEEEecCCCCCC---CC-CcEEE
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS----------IPGVTHIGGDMFKSI---PA-ADAIF 129 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~----------~~rv~~~~gd~~~~~---p~-~D~~~ 129 (135)
+..+|+|||||+|.++..+++..|..+ ++++|+ |.+++.|++ .++++++.+|.++.+ +. .|+++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVEN-IDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCE-EEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 347999999999999999998777778 999999 889887653 257999999986542 33 49998
Q ss_pred ec
Q 032721 130 MK 131 (135)
Q Consensus 130 l~ 131 (135)
+.
T Consensus 195 ~d 196 (321)
T 2pt6_A 195 VD 196 (321)
T ss_dssp EE
T ss_pred EC
Confidence 64
No 204
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.40 E-value=1.3e-07 Score=71.22 Aligned_cols=67 Identities=21% Similarity=0.248 Sum_probs=54.5
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC----------CCCcEEEecCCCCC---CCC--CcE
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS----------IPGVTHIGGDMFKS---IPA--ADA 127 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~----------~~rv~~~~gd~~~~---~p~--~D~ 127 (135)
.+..+|+|||||+|.++..+++..|..+ ++++|+ |.+++.|++ .++++++.+|.++. .+. .|+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~-V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQ-IDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCE-EEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 3457999999999999999999877778 999999 889988764 25899999998653 332 399
Q ss_pred EEec
Q 032721 128 IFMK 131 (135)
Q Consensus 128 ~~l~ 131 (135)
|++.
T Consensus 198 Ii~d 201 (334)
T 1xj5_A 198 VIVD 201 (334)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9874
No 205
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.40 E-value=6.4e-08 Score=69.76 Aligned_cols=68 Identities=16% Similarity=0.146 Sum_probs=54.8
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCC-CCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCC---------CC-
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHP-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSI---------PA- 124 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p-~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~---------p~- 124 (135)
.+..+|+|||||+|..+..+++..| +.+ ++.+|+ +.+++.|+++ ++|+++.+|..+.+ +.
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~-v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGK-ILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCE-EEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 3457999999999999999999988 677 999999 8888887643 57999999986532 23
Q ss_pred CcEEEecc
Q 032721 125 ADAIFMKV 132 (135)
Q Consensus 125 ~D~~~l~~ 132 (135)
.|++++..
T Consensus 157 fD~V~~d~ 164 (247)
T 1sui_A 157 YDFIFVDA 164 (247)
T ss_dssp BSEEEECS
T ss_pred EEEEEEcC
Confidence 49998753
No 206
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.40 E-value=9.7e-08 Score=69.00 Aligned_cols=64 Identities=16% Similarity=0.229 Sum_probs=51.4
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCCCCC--CcEEEec
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKSIPA--ADAIFMK 131 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~~p~--~D~~~l~ 131 (135)
+..+|+|+|||+|.++..+++..+ + ++++|+ |.+++.++++ -.+++..+|+.+.+|. .|+++..
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~--~-v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n 191 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGG--K-ALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVAN 191 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--E-EEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHhCC--e-EEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEEC
Confidence 447999999999999999998765 7 999999 8888887653 1289999998765543 4999864
No 207
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.40 E-value=9.8e-08 Score=68.55 Aligned_cols=65 Identities=12% Similarity=0.223 Sum_probs=53.6
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----CCcEEEecCCCCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS 121 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----~rv~~~~gd~~~~ 121 (135)
...+++..+ ..+..+|+|||||+|.++..++++. .+ ++++|+ +.+++.++++ ++++++.+|+.+.
T Consensus 18 ~~~i~~~~~-~~~~~~VLDiG~G~G~~~~~l~~~~--~~-v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~ 87 (245)
T 1yub_A 18 LNQIIKQLN-LKETDTVYEIGTGKGHLTTKLAKIS--KQ-VTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQF 87 (245)
T ss_dssp HHHHHHHCC-CCSSEEEEECSCCCSSCSHHHHHHS--SE-EEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTT
T ss_pred HHHHHHhcC-CCCCCEEEEEeCCCCHHHHHHHHhC--Ce-EEEEECCHHHHHHHHHHhccCCceEEEECChhhc
Confidence 445666665 6666899999999999999999985 56 999999 8899888764 5799999999764
No 208
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.40 E-value=1.1e-07 Score=67.50 Aligned_cols=65 Identities=15% Similarity=0.088 Sum_probs=52.6
Q ss_pred ceEEeecCCCCHHHHHHHHHCC-CCCeeEEeec-hHHHHhCCCC--------CCcEEEecCCCCC---C-CC-CcEEEec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHP-FICEGINFDL-PEVVAEAPSI--------PGVTHIGGDMFKS---I-PA-ADAIFMK 131 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p-~l~~~~~~D~-p~~~~~a~~~--------~rv~~~~gd~~~~---~-p~-~D~~~l~ 131 (135)
.+|+|||||+|..+..+++..| +.+ ++.+|+ +.+++.|+++ ++++++.+|..+. + +. .|++++.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTT-LTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSE-EEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 4999999999999999999876 677 999999 8888887642 4799999998654 3 22 3999875
Q ss_pred c
Q 032721 132 V 132 (135)
Q Consensus 132 ~ 132 (135)
.
T Consensus 137 ~ 137 (221)
T 3dr5_A 137 V 137 (221)
T ss_dssp C
T ss_pred C
Confidence 3
No 209
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.39 E-value=3.4e-07 Score=65.93 Aligned_cols=66 Identities=15% Similarity=0.158 Sum_probs=50.7
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC-CCC--CcEEEeccc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-IPA--ADAIFMKVH 133 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-~p~--~D~~~l~~v 133 (135)
+..+|+|||||+|.++..+++. ..+ ++++|+ +.+++.+++...-.++.+|+.+. +|. .|++++.++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~-v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 123 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFE-VVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGD 123 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCE-EEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSS
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCe-EEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcch
Confidence 4579999999999999999987 456 999999 88998876542223888898653 443 399988654
No 210
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.39 E-value=9.3e-08 Score=68.14 Aligned_cols=57 Identities=18% Similarity=0.145 Sum_probs=47.8
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCC-CCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCC
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHP-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFK 120 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p-~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~ 120 (135)
..+..+|+|||||+|..+..+++..| ..+ ++++|. |.+++.|+++ .+++++.+|..+
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~-v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 123 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGK-ILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALE 123 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCE-EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH
Confidence 33457999999999999999999988 567 999999 8888887653 459999999865
No 211
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.38 E-value=1.7e-07 Score=68.74 Aligned_cols=65 Identities=25% Similarity=0.306 Sum_probs=51.9
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC----------------CCCcEEEecCCCCCC--CC-
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS----------------IPGVTHIGGDMFKSI--PA- 124 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~----------------~~rv~~~~gd~~~~~--p~- 124 (135)
+..+|+|||||+|.++..+++. |..+ ++++|+ |.+++.|++ .++++++.+|..+.+ +.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~-v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDE-VIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSE-EEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCE-EEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 3479999999999999999998 8778 999999 888887642 367999999975432 33
Q ss_pred CcEEEec
Q 032721 125 ADAIFMK 131 (135)
Q Consensus 125 ~D~~~l~ 131 (135)
.|++++.
T Consensus 153 fD~Ii~d 159 (281)
T 1mjf_A 153 FDVIIAD 159 (281)
T ss_dssp EEEEEEE
T ss_pred eeEEEEC
Confidence 4888864
No 212
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.37 E-value=1.7e-07 Score=69.28 Aligned_cols=64 Identities=20% Similarity=0.284 Sum_probs=52.5
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC----------CCCcEEEecCCCCCC---CC-CcEEEe
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS----------IPGVTHIGGDMFKSI---PA-ADAIFM 130 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~----------~~rv~~~~gd~~~~~---p~-~D~~~l 130 (135)
..+|+|||||+|.++..+++..|..+ ++++|+ |.+++.+++ .++++++.+|.++.+ +. .|+|++
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEK-AILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSE-EEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCE-EEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 47999999999999999999877778 999999 888887653 268999999976532 23 399886
No 213
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.37 E-value=2.5e-07 Score=68.79 Aligned_cols=67 Identities=18% Similarity=0.331 Sum_probs=54.1
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC----------CCCcEEEecCCCCCC---CC-CcEE
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS----------IPGVTHIGGDMFKSI---PA-ADAI 128 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~----------~~rv~~~~gd~~~~~---p~-~D~~ 128 (135)
.+..+|+|||||+|.++..+++..|..+ ++++|+ |.+++.|++ .++++++.+|.++.+ +. .|+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVES-VVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCE-EEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 3457999999999999999999877778 999999 889887763 268999999986532 23 3998
Q ss_pred Eec
Q 032721 129 FMK 131 (135)
Q Consensus 129 ~l~ 131 (135)
++.
T Consensus 173 i~d 175 (304)
T 2o07_A 173 ITD 175 (304)
T ss_dssp EEE
T ss_pred EEC
Confidence 863
No 214
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.36 E-value=1.1e-07 Score=68.00 Aligned_cols=69 Identities=16% Similarity=0.085 Sum_probs=53.4
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----C-----------------------------
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----P----------------------------- 109 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----~----------------------------- 109 (135)
.+..+|||||||+|.++..+++..+ .+ ++++|+ +.+++.+++. .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TE-IIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EE-EEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-Ce-EEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 3457999999999999999888766 46 999999 8888877532 1
Q ss_pred --Cc-EEEecCCCCCC--C----C-CcEEEecccC
Q 032721 110 --GV-THIGGDMFKSI--P----A-ADAIFMKVHH 134 (135)
Q Consensus 110 --rv-~~~~gd~~~~~--p----~-~D~~~l~~vl 134 (135)
++ +++.+|+.+.. + . .|++++..+|
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l 167 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCL 167 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCH
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhh
Confidence 17 89999997652 2 2 3999987764
No 215
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.36 E-value=1.1e-07 Score=68.02 Aligned_cols=67 Identities=18% Similarity=0.154 Sum_probs=54.2
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCC-CCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCC---C------CC-
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHP-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS---I------PA- 124 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p-~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~---~------p~- 124 (135)
.+..+|+|||||+|..+..+++..| +.+ ++.+|+ |.+++.|+++ ++++++.+|..+. + +.
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~-v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGK-ITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCE-EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 3457999999999999999999988 677 999999 8888887642 4799999998653 2 23
Q ss_pred CcEEEec
Q 032721 125 ADAIFMK 131 (135)
Q Consensus 125 ~D~~~l~ 131 (135)
.|++++.
T Consensus 148 fD~I~~d 154 (237)
T 3c3y_A 148 YDFGFVD 154 (237)
T ss_dssp EEEEEEC
T ss_pred cCEEEEC
Confidence 3998864
No 216
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.36 E-value=5.9e-07 Score=68.87 Aligned_cols=77 Identities=12% Similarity=-0.053 Sum_probs=59.7
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCC--------------------------------------CCeeE
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPF--------------------------------------ICEGI 94 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~--------------------------------------l~~~~ 94 (135)
+..++.... |.+...++|.+||+|.++++.+....+ .+ ++
T Consensus 183 Aaall~l~~-~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~-v~ 260 (384)
T 3ldg_A 183 AAAIILLSN-WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLD-IS 260 (384)
T ss_dssp HHHHHHHTT-CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC-EE
T ss_pred HHHHHHHhC-CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCce-EE
Confidence 444555555 777789999999999999988876544 56 99
Q ss_pred Eeec-hHHHHhCCCC-------CCcEEEecCCCCCC-CC-CcEEEec
Q 032721 95 NFDL-PEVVAEAPSI-------PGVTHIGGDMFKSI-PA-ADAIFMK 131 (135)
Q Consensus 95 ~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~-p~-~D~~~l~ 131 (135)
++|+ +.+++.|+.+ ++++++.+|+++-. +. .|++++.
T Consensus 261 GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~N 307 (384)
T 3ldg_A 261 GFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISN 307 (384)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEEC
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEEC
Confidence 9999 9999988754 46999999997753 23 4988864
No 217
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.35 E-value=2.1e-06 Score=61.63 Aligned_cols=77 Identities=14% Similarity=0.246 Sum_probs=55.3
Q ss_pred HHHhccCC--CCCCcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec-hHHH----HhCCCCCCcEEEecCCCCC----
Q 032721 54 TSVLDGYD--GFKGVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDL-PEVV----AEAPSIPGVTHIGGDMFKS---- 121 (135)
Q Consensus 54 ~~~~~~~~--~~~~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~-p~~~----~~a~~~~rv~~~~gd~~~~---- 121 (135)
..++..++ .+.+..+|+|+|||+|..+..+++.. |+-+ ++++|+ |.++ +.+++..++.++.+|...+
T Consensus 63 ~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~-V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~ 141 (232)
T 3id6_C 63 GAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGK-AYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYK 141 (232)
T ss_dssp HHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSE-EEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTT
T ss_pred HHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCE-EEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhh
Confidence 34444443 15566899999999999999999864 5667 999999 7654 4444457899999998653
Q ss_pred -CCC-CcEEEec
Q 032721 122 -IPA-ADAIFMK 131 (135)
Q Consensus 122 -~p~-~D~~~l~ 131 (135)
++. .|++++.
T Consensus 142 ~~~~~~D~I~~d 153 (232)
T 3id6_C 142 SVVENVDVLYVD 153 (232)
T ss_dssp TTCCCEEEEEEC
T ss_pred ccccceEEEEec
Confidence 222 4988764
No 218
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.35 E-value=6.4e-07 Score=62.95 Aligned_cols=70 Identities=20% Similarity=0.122 Sum_probs=54.8
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec-hHHHHhCCCC-----------CCcEEEecCCCCCCC-C--Cc
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDL-PEVVAEAPSI-----------PGVTHIGGDMFKSIP-A--AD 126 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~-p~~~~~a~~~-----------~rv~~~~gd~~~~~p-~--~D 126 (135)
..+..+|+|||||+|.++..+++.. |..+ ++++|+ +.+++.++++ ++++++.+|..+..+ . .|
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~-v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 153 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGK-VIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYD 153 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCE-EEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcE-EEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcC
Confidence 3445799999999999999999885 6667 999999 8888877542 479999999865432 2 49
Q ss_pred EEEeccc
Q 032721 127 AIFMKVH 133 (135)
Q Consensus 127 ~~~l~~v 133 (135)
++++...
T Consensus 154 ~i~~~~~ 160 (226)
T 1i1n_A 154 AIHVGAA 160 (226)
T ss_dssp EEEECSB
T ss_pred EEEECCc
Confidence 9987654
No 219
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.35 E-value=1.4e-07 Score=69.43 Aligned_cols=66 Identities=20% Similarity=0.163 Sum_probs=53.7
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC----------CCCcEEEecCCCCCC---CC-CcEE
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS----------IPGVTHIGGDMFKSI---PA-ADAI 128 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~----------~~rv~~~~gd~~~~~---p~-~D~~ 128 (135)
.+..+|+|||||+|.++..+++..|..+ ++++|+ |.+++.+++ .+|++++.+|..+.+ +. .|++
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVEN-IDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCE-EEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 3457999999999999999998877778 999999 888887653 268999999986542 33 3999
Q ss_pred Ee
Q 032721 129 FM 130 (135)
Q Consensus 129 ~l 130 (135)
++
T Consensus 156 i~ 157 (283)
T 2i7c_A 156 IV 157 (283)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 220
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.34 E-value=9.3e-07 Score=63.51 Aligned_cols=67 Identities=16% Similarity=0.173 Sum_probs=52.7
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec-hHHHHhCC----CCCCcEEEecCCCCC--CC---C-CcEEEe
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDL-PEVVAEAP----SIPGVTHIGGDMFKS--IP---A-ADAIFM 130 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~-p~~~~~a~----~~~rv~~~~gd~~~~--~p---~-~D~~~l 130 (135)
..+..+|+|+|||+|.++..+++.. |+-+ ++++|+ |.+++.++ +..++..+.+|.-.+ .| . .|++++
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~-V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~ 153 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGR-IYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYA 153 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCE-EEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCce-EEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEE
Confidence 6677899999999999999999975 7777 999999 88887654 346889888887654 22 1 387764
No 221
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.34 E-value=5.7e-07 Score=65.89 Aligned_cols=70 Identities=17% Similarity=0.194 Sum_probs=46.7
Q ss_pred CcceEEeecCCCCHHHH----HHHHHCCCCC-eeEEeec-hHHHHhCCCC-------CCcEE--EecCCCC-------CC
Q 032721 65 GVKRLVDVGGSAGDCLR----MILQKHPFIC-EGINFDL-PEVVAEAPSI-------PGVTH--IGGDMFK-------SI 122 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~----~l~~~~p~l~-~~~~~D~-p~~~~~a~~~-------~rv~~--~~gd~~~-------~~ 122 (135)
+..+|||||||+|.++. .++.++|+.+ .++++|. +.+++.|++. +++++ ..++..+ +.
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 34699999999997544 5566778875 1399999 8898876532 34444 4444421 11
Q ss_pred CC--CcEEEecccC
Q 032721 123 PA--ADAIFMKVHH 134 (135)
Q Consensus 123 p~--~D~~~l~~vl 134 (135)
+. .|+|++.++|
T Consensus 132 ~~~~fD~V~~~~~l 145 (292)
T 2aot_A 132 ELQKWDFIHMIQML 145 (292)
T ss_dssp CCCCEEEEEEESCG
T ss_pred CCCceeEEEEeeee
Confidence 22 4999998876
No 222
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.33 E-value=2.7e-07 Score=68.75 Aligned_cols=66 Identities=24% Similarity=0.322 Sum_probs=53.6
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC-----------CCCcEEEecCCCCCC---CC-CcEE
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS-----------IPGVTHIGGDMFKSI---PA-ADAI 128 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~-----------~~rv~~~~gd~~~~~---p~-~D~~ 128 (135)
+..+|+|||||+|.++..+++..|..+ ++++|+ |.+++.|++ .++++++.+|..+.+ +. .|++
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~-v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEK-AVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCE-EEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCE-EEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 347999999999999999999877778 999999 888887653 258999999986542 33 3999
Q ss_pred Eec
Q 032721 129 FMK 131 (135)
Q Consensus 129 ~l~ 131 (135)
++.
T Consensus 156 i~d 158 (314)
T 1uir_A 156 IID 158 (314)
T ss_dssp EEE
T ss_pred EEC
Confidence 875
No 223
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.32 E-value=1.3e-07 Score=67.24 Aligned_cols=67 Identities=21% Similarity=0.241 Sum_probs=53.5
Q ss_pred CcceEEeecCCCCHHHHHHHHHCC-CCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCC---CC-----C-Cc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHP-FICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS---IP-----A-AD 126 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p-~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~---~p-----~-~D 126 (135)
+..+|+|||||+|..+..+++..| +.+ ++.+|+ |.+++.|+++ ++++++.+|..+. +| . .|
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~-v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQ-IIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCE-EEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 457999999999999999999987 567 999999 8888887653 4799999997543 21 2 39
Q ss_pred EEEecc
Q 032721 127 AIFMKV 132 (135)
Q Consensus 127 ~~~l~~ 132 (135)
++++..
T Consensus 151 ~V~~d~ 156 (232)
T 3cbg_A 151 LIFIDA 156 (232)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 988653
No 224
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.32 E-value=5.6e-07 Score=68.85 Aligned_cols=62 Identities=21% Similarity=0.191 Sum_probs=47.9
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCC----C---CCcEEEecCCCCC-CCC-CcEEEe
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPS----I---PGVTHIGGDMFKS-IPA-ADAIFM 130 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~----~---~rv~~~~gd~~~~-~p~-~D~~~l 130 (135)
++|||||||+|.++...+++. .-+ ++++|..++++.|++ + ++|+++.+|..+- +|. .|+++.
T Consensus 85 k~VLDvG~GtGiLs~~Aa~aG-A~~-V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~Dvivs 155 (376)
T 4hc4_A 85 KTVLDVGAGTGILSIFCAQAG-ARR-VYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVS 155 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHTT-CSE-EEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEC
T ss_pred CEEEEeCCCccHHHHHHHHhC-CCE-EEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEe
Confidence 689999999999988777653 335 999998656666653 2 6899999999654 675 599875
No 225
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.31 E-value=2.1e-07 Score=69.50 Aligned_cols=66 Identities=24% Similarity=0.341 Sum_probs=53.5
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC----------CCCcEEEecCCCCCC---CC-CcEEE
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS----------IPGVTHIGGDMFKSI---PA-ADAIF 129 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~----------~~rv~~~~gd~~~~~---p~-~D~~~ 129 (135)
+..+|+|||||+|.++..+++..|..+ ++++|+ |.+++.|++ .+|++++.+|.++.+ +. .|+|+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~-v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEK-VTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCE-EEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCE-EEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 347999999999999999999877778 999999 888887653 257999999986643 23 39988
Q ss_pred ec
Q 032721 130 MK 131 (135)
Q Consensus 130 l~ 131 (135)
+.
T Consensus 187 ~d 188 (314)
T 2b2c_A 187 TD 188 (314)
T ss_dssp EC
T ss_pred Ec
Confidence 63
No 226
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.30 E-value=7.5e-07 Score=68.18 Aligned_cols=64 Identities=11% Similarity=0.049 Sum_probs=52.8
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCCCCC---CcEEEecc
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKSIPA---ADAIFMKV 132 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~~p~---~D~~~l~~ 132 (135)
..+|+|+|||+|.++..+++. ..+ ++++|. +.+++.++++ .+++++.+|+++..+. .|+|++..
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~--g~~-V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~np 306 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARM--GAE-VVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNP 306 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHT--TCE-EEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECC
T ss_pred CCEEEEEeeeCCHHHHHHHHc--CCE-EEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECC
Confidence 469999999999999999997 457 999999 8899888754 3589999999876432 49999863
No 227
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.29 E-value=1.4e-06 Score=63.55 Aligned_cols=64 Identities=14% Similarity=0.205 Sum_probs=48.1
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC--C------CcEEE--ecCCCCCCCC--CcEEEe
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI--P------GVTHI--GGDMFKSIPA--ADAIFM 130 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~--~------rv~~~--~gd~~~~~p~--~D~~~l 130 (135)
+.+..+|||||||+|.++..+++. .+ ++++|+.+++..+++. . ++.++ .+|+.+ +|. .|+++.
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~-V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~-l~~~~fD~V~s 146 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PH-VMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHT-LPVERTDVIMC 146 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TT-EEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTT-SCCCCCSEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---Cc-EEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhH-CCCCCCcEEEE
Confidence 455679999999999999999887 57 9999994454433322 2 68999 899965 553 499987
Q ss_pred c
Q 032721 131 K 131 (135)
Q Consensus 131 ~ 131 (135)
.
T Consensus 147 d 147 (265)
T 2oxt_A 147 D 147 (265)
T ss_dssp C
T ss_pred e
Confidence 5
No 228
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.29 E-value=1.1e-06 Score=64.50 Aligned_cols=64 Identities=13% Similarity=0.071 Sum_probs=48.2
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC--C------CcEEE--ecCCCCCCCC--CcEEEe
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI--P------GVTHI--GGDMFKSIPA--ADAIFM 130 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~--~------rv~~~--~gd~~~~~p~--~D~~~l 130 (135)
+.+..+|||||||+|.++..++++ .+ ++++|+.+++..+++. . +++++ .+|+.+ +|. .|++++
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~-V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~-l~~~~fD~Vvs 154 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PN-VREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTK-MEPFQADTVLC 154 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TT-EEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGG-CCCCCCSEEEE
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CC-EEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhh-CCCCCcCEEEE
Confidence 455689999999999999999987 47 9999994454443322 2 68999 999855 553 499987
Q ss_pred c
Q 032721 131 K 131 (135)
Q Consensus 131 ~ 131 (135)
.
T Consensus 155 d 155 (276)
T 2wa2_A 155 D 155 (276)
T ss_dssp C
T ss_pred C
Confidence 5
No 229
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.28 E-value=2e-07 Score=71.49 Aligned_cols=77 Identities=21% Similarity=0.270 Sum_probs=56.0
Q ss_pred cHHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCC-----CCC--
Q 032721 52 FMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFK-----SIP-- 123 (135)
Q Consensus 52 ~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~-----~~p-- 123 (135)
....+++.++ ..+..+|||||||+|.++..++++. .+ ++++|+ +.+++.|++. .+.... ++|. .+|
T Consensus 95 ~~~~l~~~~~-~~~~~~VLDiGcG~G~~~~~l~~~g--~~-v~gvD~s~~~~~~a~~~-~~~~~~-~~~~~~~~~~l~~~ 168 (416)
T 4e2x_A 95 LARDFLATEL-TGPDPFIVEIGCNDGIMLRTIQEAG--VR-HLGFEPSSGVAAKAREK-GIRVRT-DFFEKATADDVRRT 168 (416)
T ss_dssp HHHHHHHTTT-CSSSCEEEEETCTTTTTHHHHHHTT--CE-EEEECCCHHHHHHHHTT-TCCEEC-SCCSHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCCCEEEEecCCCCHHHHHHHHcC--Cc-EEEECCCHHHHHHHHHc-CCCcce-eeechhhHhhcccC
Confidence 3456777776 6666899999999999999999863 36 999999 8899988765 333333 2332 122
Q ss_pred -C-CcEEEecccC
Q 032721 124 -A-ADAIFMKVHH 134 (135)
Q Consensus 124 -~-~D~~~l~~vl 134 (135)
. .|++++.++|
T Consensus 169 ~~~fD~I~~~~vl 181 (416)
T 4e2x_A 169 EGPANVIYAANTL 181 (416)
T ss_dssp HCCEEEEEEESCG
T ss_pred CCCEEEEEECChH
Confidence 2 4999998876
No 230
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.26 E-value=6.1e-07 Score=66.84 Aligned_cols=71 Identities=15% Similarity=0.089 Sum_probs=55.8
Q ss_pred ccCCCCCCcceEEeecCCCCHHHHHHHHHCCC-CCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC--CCC-Cc
Q 032721 58 DGYDGFKGVKRLVDVGGSAGDCLRMILQKHPF-ICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS--IPA-AD 126 (135)
Q Consensus 58 ~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~-l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~--~p~-~D 126 (135)
..++ ..+..+|+|+|||+|..+..+++..++ .+ ++++|+ +.+++.++++ .+++++.+|+.+. .+. .|
T Consensus 112 ~~l~-~~~g~~VLDlg~G~G~~t~~la~~~~~~~~-v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD 189 (315)
T 1ixk_A 112 VALD-PKPGEIVADMAAAPGGKTSYLAQLMRNDGV-IYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFD 189 (315)
T ss_dssp HHHC-CCTTCEEEECCSSCSHHHHHHHHHTTTCSE-EEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEE
T ss_pred HHhC-CCCCCEEEEeCCCCCHHHHHHHHHhCCCCE-EEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCC
Confidence 4444 555679999999999999999999764 67 999999 8888887653 4799999998653 222 49
Q ss_pred EEEe
Q 032721 127 AIFM 130 (135)
Q Consensus 127 ~~~l 130 (135)
++++
T Consensus 190 ~Il~ 193 (315)
T 1ixk_A 190 KILL 193 (315)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9887
No 231
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.26 E-value=3.7e-07 Score=66.41 Aligned_cols=72 Identities=10% Similarity=0.129 Sum_probs=54.6
Q ss_pred HhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-h-------HHHHhCCCC-------CCcEEEecCCCC
Q 032721 56 VLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-P-------EVVAEAPSI-------PGVTHIGGDMFK 120 (135)
Q Consensus 56 ~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p-------~~~~~a~~~-------~rv~~~~gd~~~ 120 (135)
+.+.+. ..+..+|+|+|||+|.++..+++. ..+ ++++|+ | .+++.|+++ .+++++.+|..+
T Consensus 75 l~~a~~-~~~~~~VLDlgcG~G~~a~~lA~~--g~~-V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~ 150 (258)
T 2r6z_A 75 IAKAVN-HTAHPTVWDATAGLGRDSFVLASL--GLT-VTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAE 150 (258)
T ss_dssp HHHHTT-GGGCCCEEETTCTTCHHHHHHHHT--TCC-EEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHH
T ss_pred HHHHhC-cCCcCeEEEeeCccCHHHHHHHHh--CCE-EEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHH
Confidence 333333 444579999999999999999986 457 999999 8 788877654 469999999865
Q ss_pred C---CC---C-CcEEEec
Q 032721 121 S---IP---A-ADAIFMK 131 (135)
Q Consensus 121 ~---~p---~-~D~~~l~ 131 (135)
. ++ . .|++++.
T Consensus 151 ~l~~~~~~~~~fD~V~~d 168 (258)
T 2r6z_A 151 QMPALVKTQGKPDIVYLD 168 (258)
T ss_dssp HHHHHHHHHCCCSEEEEC
T ss_pred HHHhhhccCCCccEEEEC
Confidence 3 33 3 4999874
No 232
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.26 E-value=6e-07 Score=62.97 Aligned_cols=61 Identities=20% Similarity=0.151 Sum_probs=49.6
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC-CCC--CcEEEecccC
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-IPA--ADAIFMKVHH 134 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-~p~--~D~~~l~~vl 134 (135)
..+|+|||||+|.++..+++. +++|+ +.+++.+++. +++++.+|+.+. .+. .|++++.++|
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l 112 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR-GVFVLKGTAENLPLKDESFDFALMVTTI 112 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-TCEEEECBTTBCCSCTTCEEEEEEESCG
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-CCEEEEcccccCCCCCCCeeEEEEcchH
Confidence 479999999999999988654 78898 8888888765 899999998653 333 3999998775
No 233
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.26 E-value=1.6e-06 Score=63.45 Aligned_cols=70 Identities=13% Similarity=0.038 Sum_probs=50.0
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec--hHHHHhCCCC----------------CCcEEEecCCCCC---C
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL--PEVVAEAPSI----------------PGVTHIGGDMFKS---I 122 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~--p~~~~~a~~~----------------~rv~~~~gd~~~~---~ 122 (135)
....+|+|||||+|.++..+++.. ..+ ++++|+ |.+++.++++ ++++++..|+-+. +
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~-~~~-v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG-ADQ-VVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT-CSE-EEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC-CCE-EEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHH
Confidence 344799999999999999888863 336 999999 6777765432 2688886665432 2
Q ss_pred ----C-C-CcEEEecccCC
Q 032721 123 ----P-A-ADAIFMKVHHF 135 (135)
Q Consensus 123 ----p-~-~D~~~l~~vl~ 135 (135)
+ . .|++++..+++
T Consensus 156 ~~~~~~~~fD~Ii~~dvl~ 174 (281)
T 3bzb_A 156 QRCTGLQRFQVVLLADLLS 174 (281)
T ss_dssp HHHHSCSSBSEEEEESCCS
T ss_pred HhhccCCCCCEEEEeCccc
Confidence 2 2 49999877753
No 234
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.22 E-value=5.3e-07 Score=65.78 Aligned_cols=72 Identities=14% Similarity=0.027 Sum_probs=55.7
Q ss_pred ccCCCCCCcceEEeecCCCCHHHHHHHHHCCC-CCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCC------C
Q 032721 58 DGYDGFKGVKRLVDVGGSAGDCLRMILQKHPF-ICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSI------P 123 (135)
Q Consensus 58 ~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~-l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~------p 123 (135)
..++ ..+..+|+|+|||+|..+..+++..++ .+ ++++|+ +.+++.++++ .+++++.+|+.+.. +
T Consensus 77 ~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~~-v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~ 154 (274)
T 3ajd_A 77 IVLN-PREDDFILDMCAAPGGKTTHLAQLMKNKGT-IVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNE 154 (274)
T ss_dssp HHHC-CCTTCEEEETTCTTCHHHHHHHHHTTTCSE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTT
T ss_pred HHhC-CCCcCEEEEeCCCccHHHHHHHHHcCCCCE-EEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhcc
Confidence 3444 455579999999999999999999877 66 999999 8888876643 57999999985431 2
Q ss_pred C-CcEEEec
Q 032721 124 A-ADAIFMK 131 (135)
Q Consensus 124 ~-~D~~~l~ 131 (135)
. .|++++.
T Consensus 155 ~~fD~Vl~d 163 (274)
T 3ajd_A 155 IFFDKILLD 163 (274)
T ss_dssp CCEEEEEEE
T ss_pred ccCCEEEEc
Confidence 2 4888864
No 235
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.21 E-value=3.1e-06 Score=57.91 Aligned_cols=71 Identities=23% Similarity=0.306 Sum_probs=51.3
Q ss_pred HhccCCCCCCcceEEeecCCCCHHHHHHHHHCCC---------CCeeEEeechHHHHhCCCCCCcEEE-ecCCCCC----
Q 032721 56 VLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPF---------ICEGINFDLPEVVAEAPSIPGVTHI-GGDMFKS---- 121 (135)
Q Consensus 56 ~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~---------l~~~~~~D~p~~~~~a~~~~rv~~~-~gd~~~~---- 121 (135)
+.+.+..+.+..+|+|||||+|.++..++++.+. .+ ++++|+.++ ...++++++ .+|+.+.
T Consensus 13 l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~-v~~vD~s~~----~~~~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 13 VNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGF-VLGVDLLHI----FPLEGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp HHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCE-EEEECSSCC----CCCTTCEEECSCCTTSHHHHH
T ss_pred HHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCce-EEEEechhc----ccCCCCeEEEeccCCCHHHHH
Confidence 3334432344579999999999999999999875 67 999999442 123678999 9998653
Q ss_pred -----CC--CCcEEEec
Q 032721 122 -----IP--AADAIFMK 131 (135)
Q Consensus 122 -----~p--~~D~~~l~ 131 (135)
++ ..|+++..
T Consensus 88 ~~~~~~~~~~fD~V~~~ 104 (196)
T 2nyu_A 88 RILEVLPGRRADVILSD 104 (196)
T ss_dssp HHHHHSGGGCEEEEEEC
T ss_pred HHHHhcCCCCCcEEEeC
Confidence 22 24999863
No 236
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.21 E-value=9.3e-07 Score=65.04 Aligned_cols=66 Identities=17% Similarity=-0.039 Sum_probs=53.7
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCCC--CcEEEecc
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPA--ADAIFMKV 132 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p~--~D~~~l~~ 132 (135)
+..+|+|+|||+|.++..+++. +..+ ++.+|+ |.+++.++++ ++++++.+|.++-.+. +|.++|..
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~-g~~~-V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~ 200 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVY-GKAK-VIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGY 200 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHH-TCCE-EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECC
T ss_pred CCCEEEEecCcCcHHHHHHHHh-cCCe-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECC
Confidence 4579999999999999999886 4457 999999 9999887653 6799999999775443 59888753
No 237
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.21 E-value=4.5e-07 Score=72.58 Aligned_cols=66 Identities=12% Similarity=0.063 Sum_probs=51.6
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCC---CCC-C-CcEEEeccc
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFK---SIP-A-ADAIFMKVH 133 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~---~~p-~-~D~~~l~~v 133 (135)
..+|||||||.|.++..+++. +.+ +|++|+ +.+++.|+.+ .+|+|..+|..+ ..+ . .|+|+...+
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~--ga~-V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASK--GAT-IVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCeEEEECCCCcHHHHHHHhC--CCE-EEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 458999999999999999997 567 999999 8899887642 358999988733 123 2 499987665
Q ss_pred C
Q 032721 134 H 134 (135)
Q Consensus 134 l 134 (135)
|
T Consensus 144 ~ 144 (569)
T 4azs_A 144 F 144 (569)
T ss_dssp H
T ss_pred h
Confidence 4
No 238
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.19 E-value=2.7e-06 Score=62.51 Aligned_cols=55 Identities=16% Similarity=0.292 Sum_probs=44.1
Q ss_pred CcceEEeecCCC---CHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCC
Q 032721 65 GVKRLVDVGGSA---GDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFK 120 (135)
Q Consensus 65 ~~~~vvDvGgG~---G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~ 120 (135)
+..+|||||||+ |.....+.+..|+.+ ++.+|. |.|++.|++. .+++++.+|+.+
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~ar-Vv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~ 142 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESR-VVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLD 142 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCE-EEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCE-EEEEeCChHHHHHHHHHhccCCCCcEEEEEecccC
Confidence 457999999997 445444555789998 999999 9999998752 369999999976
No 239
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.18 E-value=1.4e-06 Score=65.41 Aligned_cols=66 Identities=11% Similarity=0.151 Sum_probs=54.0
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCC-----CCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCCCCC--CcEEEec
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPF-----ICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKSIPA--ADAIFMK 131 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~-----l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~~p~--~D~~~l~ 131 (135)
...+|+|+|||+|.++..+++..+. .+ ++++|+ |.+++.|+.+ .++.++.+|.++..+. .|+++..
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~-v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~N 208 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVH-ASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISD 208 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEE-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCce-EEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEEC
Confidence 4579999999999999999998875 56 999999 8888888653 3689999999887542 4888764
No 240
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.17 E-value=2.7e-06 Score=65.99 Aligned_cols=63 Identities=10% Similarity=-0.000 Sum_probs=51.6
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCCC-CcEEEec
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIPA-ADAIFMK 131 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p~-~D~~~l~ 131 (135)
+..+|+|+|||+|.++..+++. ..+ ++++|. +.+++.|+++ . ++++.+|+++..+. .|++++.
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~--~~~-V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~Vv~d 360 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKR--GFN-VKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIVD 360 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEEC
T ss_pred CCCEEEEeeccchHHHHHHHHc--CCE-EEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEEEEc
Confidence 3468999999999999999986 335 999999 8999988754 3 89999999876553 5988873
No 241
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.15 E-value=1.3e-06 Score=65.58 Aligned_cols=63 Identities=13% Similarity=0.033 Sum_probs=51.2
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCCCCCCcEEEec
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKSIPAADAIFMK 131 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~~p~~D~~~l~ 131 (135)
+..+|+|+|||+|.++.. ++ +..+ ++++|+ |.+++.++++ ++++++.+|.++.....|++++.
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~--~~~~-V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~d 265 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK--NAKK-IYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMN 265 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT--TSSE-EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEEC
T ss_pred CCCEEEEccCccCHHHHh-cc--CCCE-EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEEC
Confidence 447999999999999999 76 4556 999999 9999887653 57999999997755335998875
No 242
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.14 E-value=5.7e-07 Score=67.64 Aligned_cols=62 Identities=16% Similarity=0.110 Sum_probs=50.7
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------C--CcEEEecCCCCCCC-------CCcEEE
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------P--GVTHIGGDMFKSIP-------AADAIF 129 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~--rv~~~~gd~~~~~p-------~~D~~~ 129 (135)
..+|||+|||+|.++..+++... + ++++|+ +.+++.|+++ + +++++.+|.++.++ ..|+++
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga--~-V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGA--E-VTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC--E-EEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCcEEEcccccCHHHHHHHHcCC--E-EEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 36899999999999999998643 7 999999 8999888753 2 59999999976432 249998
Q ss_pred e
Q 032721 130 M 130 (135)
Q Consensus 130 l 130 (135)
+
T Consensus 231 ~ 231 (332)
T 2igt_A 231 T 231 (332)
T ss_dssp E
T ss_pred E
Confidence 7
No 243
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.13 E-value=3.7e-06 Score=62.51 Aligned_cols=65 Identities=18% Similarity=0.138 Sum_probs=47.5
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-----hHHHHhCCC--C--CCcEEEec-CCCCCCCC-CcEEEec
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-----PEVVAEAPS--I--PGVTHIGG-DMFKSIPA-ADAIFMK 131 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-----p~~~~~a~~--~--~rv~~~~g-d~~~~~p~-~D~~~l~ 131 (135)
+.+..+|||||||+|.++..++++ -+ ++++|+ +..++..+. . +++.++.+ |+++..+. .|+|+..
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~-V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd 155 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KN-VREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCD 155 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TT-EEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CC-EEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEEC
Confidence 445579999999999999999987 36 999998 444333221 1 57999999 98753223 5999874
No 244
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.10 E-value=2e-06 Score=63.78 Aligned_cols=67 Identities=9% Similarity=0.019 Sum_probs=47.1
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----C-------CcEEEecCCCC---------CCC
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----P-------GVTHIGGDMFK---------SIP 123 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~-------rv~~~~gd~~~---------~~p 123 (135)
..+|||||||+|..+..+++.. ..+ ++++|+ +.+++.|++. . ++++...|... ..|
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~-~~~-v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGE-IAL-LVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTT-CSE-EEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCeEEEEecCCcHhHHHHHhcC-CCe-EEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 4799999999998776666542 346 999999 9999998753 1 25677777722 134
Q ss_pred C--CcEEEecccC
Q 032721 124 A--ADAIFMKVHH 134 (135)
Q Consensus 124 ~--~D~~~l~~vl 134 (135)
. .|+|++..+|
T Consensus 127 ~~~FD~V~~~~~l 139 (302)
T 2vdw_A 127 FGKFNIIDWQFAI 139 (302)
T ss_dssp SSCEEEEEEESCG
T ss_pred CCCeeEEEECchH
Confidence 3 3999876543
No 245
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.08 E-value=2.8e-07 Score=66.67 Aligned_cols=41 Identities=12% Similarity=-0.074 Sum_probs=30.8
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCC
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAP 106 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~ 106 (135)
.+..+|||||||+|.++..++...- -+ ++++|+ |.+++.|+
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~-~~-v~g~D~s~~~l~~a~ 95 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSF-QD-ITLSDFTDRNREELE 95 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTE-EE-EEEEESCHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhh-cc-eeeccccHHHHHHHH
Confidence 3457999999999987765554432 25 999999 88888765
No 246
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.07 E-value=5.9e-07 Score=65.60 Aligned_cols=41 Identities=15% Similarity=0.063 Sum_probs=30.5
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS 107 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~ 107 (135)
+..+|||||||+|.++ .++...+..+ ++++|+ +.+++.|++
T Consensus 71 ~~~~vLDiGcG~G~~~-~l~~~~~~~~-v~gvD~s~~~l~~a~~ 112 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQ-LLSACSHFED-ITMTDFLEVNRQELGR 112 (289)
T ss_dssp CCSEEEEETCTTCCGG-GTTGGGGCSE-EEEECSCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHH-HHhhccCCCe-EEEeCCCHHHHHHHHH
Confidence 3479999999999943 3444444557 999999 888886643
No 247
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.05 E-value=9.6e-07 Score=67.55 Aligned_cols=64 Identities=13% Similarity=0.043 Sum_probs=51.1
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------C--CcEEEecCCCCCCC-------CCcEE
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------P--GVTHIGGDMFKSIP-------AADAI 128 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~--rv~~~~gd~~~~~p-------~~D~~ 128 (135)
+..+|+|+|||+|.++..+++.. ..+ ++++|+ |.+++.|+++ . +++++.+|.++.++ ..|++
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~g-a~~-V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGG-AMA-TTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTT-BSE-EEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCC-CCE-EEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 44799999999999999999853 225 999999 9999888753 3 89999999976432 24999
Q ss_pred Ee
Q 032721 129 FM 130 (135)
Q Consensus 129 ~l 130 (135)
++
T Consensus 290 i~ 291 (385)
T 2b78_A 290 II 291 (385)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 248
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.04 E-value=4.6e-06 Score=64.95 Aligned_cols=71 Identities=18% Similarity=0.095 Sum_probs=55.7
Q ss_pred ccCCCCCCcceEEeecCCCCHHHHHHHHHCCC-CCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC---CC-C-
Q 032721 58 DGYDGFKGVKRLVDVGGSAGDCLRMILQKHPF-ICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS---IP-A- 124 (135)
Q Consensus 58 ~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~-l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~---~p-~- 124 (135)
..++ ..+..+|+|+|||+|..+..+++..++ .+ ++++|+ +..++.++++ .+++++.+|+.+. ++ .
T Consensus 253 ~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~~-v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~ 330 (450)
T 2yxl_A 253 IVLD-PKPGETVVDLAAAPGGKTTHLAELMKNKGK-IYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEV 330 (450)
T ss_dssp HHHC-CCTTCEEEESSCTTCHHHHHHHHHTTTCSE-EEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSC
T ss_pred HhcC-CCCcCEEEEeCCCccHHHHHHHHHcCCCCE-EEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCC
Confidence 3344 455579999999999999999999887 67 999999 8888776543 5799999998654 33 3
Q ss_pred CcEEEe
Q 032721 125 ADAIFM 130 (135)
Q Consensus 125 ~D~~~l 130 (135)
.|++++
T Consensus 331 fD~Vl~ 336 (450)
T 2yxl_A 331 ADKVLL 336 (450)
T ss_dssp EEEEEE
T ss_pred CCEEEE
Confidence 399986
No 249
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.01 E-value=8.2e-06 Score=60.36 Aligned_cols=75 Identities=12% Similarity=0.118 Sum_probs=48.8
Q ss_pred HHHhccCCCCC-CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhC-CCCCCcEEEe-cCC--CC--CCCC-
Q 032721 54 TSVLDGYDGFK-GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEA-PSIPGVTHIG-GDM--FK--SIPA- 124 (135)
Q Consensus 54 ~~~~~~~~~~~-~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a-~~~~rv~~~~-gd~--~~--~~p~- 124 (135)
..+++.+. .. ...+++|||||||.++..+++. +..+ ++++|+ +.+++.+ +..+++.... .|+ ++ .+|.
T Consensus 74 ~~~l~~~~-~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~-V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~ 150 (291)
T 3hp7_A 74 EKALAVFN-LSVEDMITIDIGASTGGFTDVMLQN-GAKL-VYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEG 150 (291)
T ss_dssp HHHHHHTT-CCCTTCEEEEETCTTSHHHHHHHHT-TCSE-EEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTC
T ss_pred HHHHHhcC-CCccccEEEecCCCccHHHHHHHhC-CCCE-EEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCC
Confidence 34556664 43 3469999999999999988886 4456 999999 8888763 3345554432 232 11 1343
Q ss_pred -CcEEEec
Q 032721 125 -ADAIFMK 131 (135)
Q Consensus 125 -~D~~~l~ 131 (135)
.|++++.
T Consensus 151 ~fD~v~~d 158 (291)
T 3hp7_A 151 LPSFASID 158 (291)
T ss_dssp CCSEEEEC
T ss_pred CCCEEEEE
Confidence 4777654
No 250
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.97 E-value=3.8e-06 Score=60.02 Aligned_cols=50 Identities=20% Similarity=0.264 Sum_probs=37.1
Q ss_pred HHhccCCCCC-CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC
Q 032721 55 SVLDGYDGFK-GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS 107 (135)
Q Consensus 55 ~~~~~~~~~~-~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~ 107 (135)
.+++.++ .. ...+|+|||||+|.++..+++. +..+ ++++|+ +.+++.+++
T Consensus 27 ~~L~~~~-~~~~g~~VLDiGcGtG~~t~~la~~-g~~~-V~gvDis~~ml~~a~~ 78 (232)
T 3opn_A 27 KALKEFH-LEINGKTCLDIGSSTGGFTDVMLQN-GAKL-VYALDVGTNQLAWKIR 78 (232)
T ss_dssp HHHHHTT-CCCTTCEEEEETCTTSHHHHHHHHT-TCSE-EEEECSSCCCCCHHHH
T ss_pred HHHHHcC-CCCCCCEEEEEccCCCHHHHHHHhc-CCCE-EEEEcCCHHHHHHHHH
Confidence 3444554 32 3369999999999999999987 3336 999999 888777543
No 251
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.96 E-value=2.7e-06 Score=64.65 Aligned_cols=51 Identities=14% Similarity=0.030 Sum_probs=43.0
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCC
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFK 120 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~ 120 (135)
.+|+|+|||+|.++..+++.. .+ ++++|. |.+++.|+++ ++++++.+|.++
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~--~~-V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~ 272 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNF--DR-VLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEE 272 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGS--SE-EEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHH
T ss_pred CEEEEccCCCCHHHHHHHhcC--CE-EEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHH
Confidence 679999999999999988753 35 999999 9999888653 579999999864
No 252
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.96 E-value=3.1e-06 Score=64.39 Aligned_cols=65 Identities=15% Similarity=0.157 Sum_probs=51.9
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC--------------CCcEEEecCCCCCCC------
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI--------------PGVTHIGGDMFKSIP------ 123 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~--------------~rv~~~~gd~~~~~p------ 123 (135)
+.++|+|||||+|.++.++++..+ .+ ++.+|+ |.+++.|+++ +|++++.+|.++.+.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~-Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KM-VTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SE-EEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CE-EEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 458999999999999999998755 56 999999 9999887642 279999999876532
Q ss_pred C-CcEEEec
Q 032721 124 A-ADAIFMK 131 (135)
Q Consensus 124 ~-~D~~~l~ 131 (135)
. .|+|++-
T Consensus 266 ~~fDvII~D 274 (364)
T 2qfm_A 266 REFDYVIND 274 (364)
T ss_dssp CCEEEEEEE
T ss_pred CCceEEEEC
Confidence 2 3888864
No 253
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.95 E-value=8.9e-06 Score=66.74 Aligned_cols=77 Identities=13% Similarity=0.012 Sum_probs=58.4
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHH------------------------------------------CCCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQK------------------------------------------HPFI 90 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~------------------------------------------~p~l 90 (135)
+..++.... |.....|+|.+||+|.++++.+.. .++.
T Consensus 179 Aa~ll~~~~-~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~ 257 (703)
T 3v97_A 179 AAAIVMRSG-WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS 257 (703)
T ss_dssp HHHHHHHTT-CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHhhC-CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCc
Confidence 344555555 777789999999999999988765 2345
Q ss_pred CeeEEeec-hHHHHhCCCC-------CCcEEEecCCCCC-CC----CCcEEEec
Q 032721 91 CEGINFDL-PEVVAEAPSI-------PGVTHIGGDMFKS-IP----AADAIFMK 131 (135)
Q Consensus 91 ~~~~~~D~-p~~~~~a~~~-------~rv~~~~gd~~~~-~p----~~D~~~l~ 131 (135)
+ ++++|+ |.+++.|+.+ +++++..+|+++- .| ..|+++..
T Consensus 258 ~-i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~N 310 (703)
T 3v97_A 258 H-FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSN 310 (703)
T ss_dssp C-EEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEEC
T ss_pred c-EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeC
Confidence 7 999999 9999988764 4589999999764 23 24888764
No 254
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.95 E-value=1.2e-05 Score=59.46 Aligned_cols=67 Identities=18% Similarity=0.201 Sum_probs=54.1
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC-----------CCCcEEEecCCCCCCC---C-CcE
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS-----------IPGVTHIGGDMFKSIP---A-ADA 127 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~-----------~~rv~~~~gd~~~~~p---~-~D~ 127 (135)
++.++|+=||||.|..+.++++..|..+ ++++|+ |.|++.+++ .+|++++.+|-++-+- . -|+
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~-v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVES-ITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCE-EEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcce-EEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 3558999999999999999998666556 999999 999988754 2799999999887642 2 398
Q ss_pred EEec
Q 032721 128 IFMK 131 (135)
Q Consensus 128 ~~l~ 131 (135)
|++-
T Consensus 161 Ii~D 164 (294)
T 3o4f_A 161 IISD 164 (294)
T ss_dssp EEES
T ss_pred EEEe
Confidence 8863
No 255
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.94 E-value=3.2e-06 Score=65.36 Aligned_cols=62 Identities=24% Similarity=0.354 Sum_probs=50.6
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC--------CCcEEEecCCCCCCC-----CCcEEEe
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI--------PGVTHIGGDMFKSIP-----AADAIFM 130 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~--------~rv~~~~gd~~~~~p-----~~D~~~l 130 (135)
..+|+|+|||+|..+..+++.. .+ ++.+|+ |.+++.|+.+ ++++++.+|.++.++ ..|++++
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g--~~-V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKA--SQ-GIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTC--SE-EEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCEEEEeCCCchHHHHHHHhcC--CE-EEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 4799999999999999988863 46 999999 9999887643 469999999987532 2499887
No 256
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.92 E-value=1.8e-06 Score=65.88 Aligned_cols=63 Identities=19% Similarity=0.178 Sum_probs=51.4
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCC------C-CcEEEe
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIP------A-ADAIFM 130 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p------~-~D~~~l 130 (135)
+..+|+|+|||+|.++..+++. ..+ ++++|+ +.+++.|+++ ++++++.+|.++.++ . .|++++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~-v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FRE-VVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEE-EEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCE-EEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 4579999999999999999998 446 999999 8999888753 459999999876432 2 499887
No 257
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.91 E-value=2e-06 Score=65.78 Aligned_cols=64 Identities=19% Similarity=0.161 Sum_probs=51.4
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC------C-CcEEEecCCCCCCC------C-CcEEE
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI------P-GVTHIGGDMFKSIP------A-ADAIF 129 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~------~-rv~~~~gd~~~~~p------~-~D~~~ 129 (135)
+..+|+|+|||+|.++..+++. +..+ ++++|+ +.+++.|+++ + +++++.+|.++..+ . .|+++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~-v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADE-VIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSE-EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCE-EEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 4579999999999999999986 3346 999999 8899887653 2 79999999876432 2 49998
Q ss_pred e
Q 032721 130 M 130 (135)
Q Consensus 130 l 130 (135)
+
T Consensus 295 ~ 295 (396)
T 2as0_A 295 L 295 (396)
T ss_dssp E
T ss_pred E
Confidence 7
No 258
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.90 E-value=1e-05 Score=62.45 Aligned_cols=62 Identities=15% Similarity=0.122 Sum_probs=46.5
Q ss_pred cceEEeecCC------CCHHHHHHHHH-CCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC-CC-------C-CcEE
Q 032721 66 VKRLVDVGGS------AGDCLRMILQK-HPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-IP-------A-ADAI 128 (135)
Q Consensus 66 ~~~vvDvGgG------~G~~~~~l~~~-~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-~p-------~-~D~~ 128 (135)
..+||||||| +|..+..++++ +|+.+ ++++|+ |.+. ...++++++.+|..+. ++ . .|+|
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~-V~GVDiSp~m~---~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlV 292 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQ-IYGLDIMDKSH---VDELRIRTIQGDQNDAEFLDRIARRYGPFDIV 292 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCE-EEEEESSCCGG---GCBTTEEEEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCE-EEEEECCHHHh---hcCCCcEEEEecccccchhhhhhcccCCccEE
Confidence 4799999999 66666666665 59988 999999 6663 2347899999999663 22 2 3999
Q ss_pred Eec
Q 032721 129 FMK 131 (135)
Q Consensus 129 ~l~ 131 (135)
+..
T Consensus 293 isd 295 (419)
T 3sso_A 293 IDD 295 (419)
T ss_dssp EEC
T ss_pred EEC
Confidence 864
No 259
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.88 E-value=1.7e-05 Score=64.30 Aligned_cols=96 Identities=21% Similarity=0.199 Sum_probs=62.0
Q ss_pred ccccccCchHHHHHHHHHhccccccHHHHhccCC---CCCCcceEEeecCCCCHHHHHHHHHCC----CCCeeEEeechH
Q 032721 28 YSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYD---GFKGVKRLVDVGGSAGDCLRMILQKHP----FICEGINFDLPE 100 (135)
Q Consensus 28 ~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~---~~~~~~~vvDvGgG~G~~~~~l~~~~p----~l~~~~~~D~p~ 100 (135)
||-+++|+-.-..|.+|+.. ++.+..+ .-.+...|+|||||+|-++...+++.. +++ +.+++-.+
T Consensus 324 YevFEkD~vKy~~Ye~AI~~-------Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vk-VyAVEknp 395 (637)
T 4gqb_A 324 YEVFEKDPIKYSQYQQAIYK-------CLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIK-LYAVEKNP 395 (637)
T ss_dssp HHHHTTCHHHHHHHHHHHHH-------HHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEE-EEEEESCH
T ss_pred hhhhcCChhhHHHHHHHHHH-------HHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcE-EEEEECCH
Confidence 55566778777788887754 2222221 122346899999999988443333322 234 78888854
Q ss_pred HHHhCCCC-------CCcEEEecCCCCC-CCC-CcEEEec
Q 032721 101 VVAEAPSI-------PGVTHIGGDMFKS-IPA-ADAIFMK 131 (135)
Q Consensus 101 ~~~~a~~~-------~rv~~~~gd~~~~-~p~-~D~~~l~ 131 (135)
+...+++. ++|+++.||+-+- +|+ +|+++.-
T Consensus 396 ~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSE 435 (637)
T 4gqb_A 396 NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSE 435 (637)
T ss_dssp HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECC
T ss_pred HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEE
Confidence 55555431 7899999999665 786 5999754
No 260
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.88 E-value=6e-06 Score=63.88 Aligned_cols=67 Identities=16% Similarity=0.128 Sum_probs=53.5
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCC---CC-C-CcEEEe
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKS---IP-A-ADAIFM 130 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~---~p-~-~D~~~l 130 (135)
..+..+|+|+|||+|..+..+++..|+.+ ++++|+ +..++.++++ -+++++.+|+.+. ++ . .|++++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~-v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~ 321 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQ-VVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILL 321 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCE-EEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCE-EEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEE
Confidence 44557999999999999999999999877 999999 7777776543 3588999999764 23 2 499986
No 261
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.86 E-value=5.9e-06 Score=60.13 Aligned_cols=75 Identities=15% Similarity=0.141 Sum_probs=53.6
Q ss_pred HHHHhccCCCCCCc--ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHH-------HHhCCCC--------CCcEEE
Q 032721 53 MTSVLDGYDGFKGV--KRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEV-------VAEAPSI--------PGVTHI 114 (135)
Q Consensus 53 ~~~~~~~~~~~~~~--~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~-------~~~a~~~--------~rv~~~ 114 (135)
.+.+++... ..+. .+|+|+|||+|..+..+++. ..+ ++.+|. |.+ ++.++.+ .+++++
T Consensus 75 ~e~l~~al~-l~~g~~~~VLDl~~G~G~dal~lA~~--g~~-V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~ 150 (258)
T 2oyr_A 75 GEAVAKAVG-IKGDYLPDVVDATAGLGRDAFVLASV--GCR-VRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLI 150 (258)
T ss_dssp GSHHHHHTT-CBTTBCCCEEETTCTTCHHHHHHHHH--TCC-EEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEE
T ss_pred HHHHHHHhc-ccCCCCCEEEEcCCcCCHHHHHHHHc--CCE-EEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEE
Confidence 344556664 5554 79999999999999999998 457 999999 654 3333211 469999
Q ss_pred ecCCCCC---CCC-CcEEEec
Q 032721 115 GGDMFKS---IPA-ADAIFMK 131 (135)
Q Consensus 115 ~gd~~~~---~p~-~D~~~l~ 131 (135)
.+|..+- ++. .|++++.
T Consensus 151 ~~D~~~~L~~~~~~fDvV~lD 171 (258)
T 2oyr_A 151 HASSLTALTDITPRPQVVYLD 171 (258)
T ss_dssp ESCHHHHSTTCSSCCSEEEEC
T ss_pred ECCHHHHHHhCcccCCEEEEc
Confidence 9998653 333 4999874
No 262
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.83 E-value=1.3e-05 Score=62.34 Aligned_cols=77 Identities=17% Similarity=0.104 Sum_probs=56.4
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHC-------------CCCCeeEEeec-hHHHHhCCCC------C--C
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKH-------------PFICEGINFDL-PEVVAEAPSI------P--G 110 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~-------------p~l~~~~~~D~-p~~~~~a~~~------~--r 110 (135)
+..+++..+ .....+|+|.|||+|.++..+++.. +..+ ++++|+ |.+++.|+.+ . +
T Consensus 160 ~~~mv~~l~-~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~-i~G~Ei~~~~~~lA~~nl~l~g~~~~~ 237 (445)
T 2okc_A 160 IQAMVDCIN-PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKA-LHGVDNTPLVVTLASMNLYLHGIGTDR 237 (445)
T ss_dssp HHHHHHHHC-CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTT-EEEEESCHHHHHHHHHHHHHTTCCSSC
T ss_pred HHHHHHHhC-CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeE-EEEEeCCHHHHHHHHHHHHHhCCCcCC
Confidence 334555544 3444699999999999999988763 4567 999999 8888877642 2 6
Q ss_pred cEEEecCCCCCCC--CCcEEEec
Q 032721 111 VTHIGGDMFKSIP--AADAIFMK 131 (135)
Q Consensus 111 v~~~~gd~~~~~p--~~D~~~l~ 131 (135)
+.+..+|.+...+ ..|+++..
T Consensus 238 ~~i~~gD~l~~~~~~~fD~Iv~N 260 (445)
T 2okc_A 238 SPIVCEDSLEKEPSTLVDVILAN 260 (445)
T ss_dssp CSEEECCTTTSCCSSCEEEEEEC
T ss_pred CCEeeCCCCCCcccCCcCEEEEC
Confidence 7899999987633 24888764
No 263
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.81 E-value=2.2e-05 Score=58.46 Aligned_cols=71 Identities=14% Similarity=0.104 Sum_probs=54.0
Q ss_pred ccCCCCCCcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCCCC------
Q 032721 58 DGYDGFKGVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKSIP------ 123 (135)
Q Consensus 58 ~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~~p------ 123 (135)
..++ .....+|+|+|||+|..+..+++.. +..+ ++.+|+ +.+++.++++ .+++++.+|+.+..+
T Consensus 96 ~~l~-~~~g~~VLDlcaG~G~kt~~la~~~~~~g~-V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~ 173 (309)
T 2b9e_A 96 MLLD-PPPGSHVIDACAAPGNKTSHLAALLKNQGK-IFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYH 173 (309)
T ss_dssp HHHC-CCTTCEEEESSCTTCHHHHHHHHHHTTCSE-EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGT
T ss_pred HHhC-CCCCCEEEEeCCChhHHHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccC
Confidence 3444 4555799999999999999999875 4567 999999 8888877643 579999999865321
Q ss_pred CCcEEEe
Q 032721 124 AADAIFM 130 (135)
Q Consensus 124 ~~D~~~l 130 (135)
..|.|++
T Consensus 174 ~fD~Vl~ 180 (309)
T 2b9e_A 174 EVHYILL 180 (309)
T ss_dssp TEEEEEE
T ss_pred CCCEEEE
Confidence 2488876
No 264
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.81 E-value=3.9e-06 Score=64.22 Aligned_cols=65 Identities=20% Similarity=0.166 Sum_probs=51.4
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------C-CcEEEecCCCCCCC-------CCcEE
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------P-GVTHIGGDMFKSIP-------AADAI 128 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~-rv~~~~gd~~~~~p-------~~D~~ 128 (135)
+..+|+|+|||+|.++..+++.. ..+ ++++|+ +.+++.|+++ + +++++.+|.++.++ ..|++
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~-V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQ-VVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSE-EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCE-EEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 34799999999999999999864 335 999999 8898887643 2 78999999876532 24998
Q ss_pred Eec
Q 032721 129 FMK 131 (135)
Q Consensus 129 ~l~ 131 (135)
++.
T Consensus 298 i~d 300 (396)
T 3c0k_A 298 VMD 300 (396)
T ss_dssp EEC
T ss_pred EEC
Confidence 874
No 265
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.76 E-value=2.9e-05 Score=57.13 Aligned_cols=63 Identities=29% Similarity=0.302 Sum_probs=52.4
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC--CCcEEEecCCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI--PGVTHIGGDMF 119 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~--~rv~~~~gd~~ 119 (135)
..++++.+. ..+...+||.+||.|..+..|+++ +.+ ++++|. |.+++.|++. +|++++.+||-
T Consensus 11 l~e~le~L~-~~~gg~~VD~T~G~GGHS~~il~~--~g~-VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~ 76 (285)
T 1wg8_A 11 YQEALDLLA-VRPGGVYVDATLGGAGHARGILER--GGR-VIGLDQDPEAVARAKGLHLPGLTVVQGNFR 76 (285)
T ss_dssp HHHHHHHHT-CCTTCEEEETTCTTSHHHHHHHHT--TCE-EEEEESCHHHHHHHHHTCCTTEEEEESCGG
T ss_pred HHHHHHhhC-CCCCCEEEEeCCCCcHHHHHHHHC--CCE-EEEEeCCHHHHHHHHhhccCCEEEEECCcc
Confidence 466777776 666689999999999999999998 667 999999 8888766432 68999999994
No 266
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.75 E-value=9.9e-06 Score=63.52 Aligned_cols=72 Identities=11% Similarity=-0.012 Sum_probs=55.1
Q ss_pred HhccCCCCCCcceEEeecCCCCHHHHHHHHHCCC-CCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC---CCC
Q 032721 56 VLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPF-ICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS---IPA 124 (135)
Q Consensus 56 ~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~-l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~---~p~ 124 (135)
++..++ ..+..+|+|+|||+|..+..+++..++ .+ ++.+|+ +.+++.++++ . +.++.+|..+. .+.
T Consensus 93 ~a~~L~-~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~-V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~ 169 (464)
T 3m6w_A 93 VGVLLD-PKPGERVLDLAAAPGGKTTHLAARMGGKGL-LLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGT 169 (464)
T ss_dssp HHHHHC-CCTTCEEEESSCTTCHHHHHHHHHTTTCSE-EEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCS
T ss_pred HHHhcC-cCCCCEEEEEcCCcCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccc
Confidence 334444 455679999999999999999999876 56 999999 8888887653 4 88999987542 233
Q ss_pred -CcEEEe
Q 032721 125 -ADAIFM 130 (135)
Q Consensus 125 -~D~~~l 130 (135)
.|+|++
T Consensus 170 ~FD~Il~ 176 (464)
T 3m6w_A 170 YFHRVLL 176 (464)
T ss_dssp CEEEEEE
T ss_pred cCCEEEE
Confidence 499885
No 267
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.68 E-value=5.1e-05 Score=59.68 Aligned_cols=65 Identities=18% Similarity=0.127 Sum_probs=52.6
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCC-CCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC---CCC-CcEEEe
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPF-ICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS---IPA-ADAIFM 130 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~-l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~---~p~-~D~~~l 130 (135)
...+|+|+|||+|..+..+++..++ .+ ++.+|+ +.+++.++++ .+++++.+|..+- .+. .|+|++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~-V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGA-ILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILL 193 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSE-EEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEE
Confidence 5579999999999999999998764 56 999999 8888877653 5799999998653 233 499887
No 268
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.67 E-value=1.9e-05 Score=60.68 Aligned_cols=63 Identities=14% Similarity=0.134 Sum_probs=49.2
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-----CCcEEEecCCCCCC---CC-CcEEEec
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-----PGVTHIGGDMFKSI---PA-ADAIFMK 131 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-----~rv~~~~gd~~~~~---p~-~D~~~l~ 131 (135)
..+|+|+|||+|.++..+++. ..+ ++.+|+ |.+++.++++ -..++..+|.++.+ +. .|++++.
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~--ga~-V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~d 287 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK--GAY-ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLD 287 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEEC
T ss_pred CCeEEEcccchhHHHHHHHHc--CCe-EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEEC
Confidence 579999999999999999986 456 999999 9999988764 12356788987642 22 4988863
No 269
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.67 E-value=5.8e-05 Score=50.44 Aligned_cols=55 Identities=18% Similarity=0.137 Sum_probs=42.6
Q ss_pred CcceEEeecCCCC-HHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCCCC----CCcEEEe
Q 032721 65 GVKRLVDVGGSAG-DCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIP----AADAIFM 130 (135)
Q Consensus 65 ~~~~vvDvGgG~G-~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~~p----~~D~~~l 130 (135)
...++||||||.| ..+..|+++ .+.. +++.|+ |..++ ++..|.|++.+ .+|+++.
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~-~g~~-V~atDInp~Av~---------~v~dDiF~P~~~~Y~~~DLIYs 95 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKH-SKVD-LVLTDIKPSHGG---------IVRDDITSPRMEIYRGAALIYS 95 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHH-SCCE-EEEECSSCSSTT---------EECCCSSSCCHHHHTTEEEEEE
T ss_pred CCCcEEEEccCCChHHHHHHHHh-CCCe-EEEEECCccccc---------eEEccCCCCcccccCCcCEEEE
Confidence 3469999999999 688888874 3567 999998 66555 88899999844 4588743
No 270
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=97.65 E-value=1.2e-05 Score=62.98 Aligned_cols=73 Identities=10% Similarity=0.000 Sum_probs=55.1
Q ss_pred HhccCCCCCCcceEEeecCCCCHHHHHHHHHCCC-CCeeEEeec-hHHHHhCCCC------CCcEEEecCCCCC---CCC
Q 032721 56 VLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPF-ICEGINFDL-PEVVAEAPSI------PGVTHIGGDMFKS---IPA 124 (135)
Q Consensus 56 ~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~-l~~~~~~D~-p~~~~~a~~~------~rv~~~~gd~~~~---~p~ 124 (135)
++..++ .....+|+|+|||+|..+..+++..++ .+ ++.+|+ +..++.++++ .++.++.+|..+- .+.
T Consensus 97 ~~~~L~-~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~-V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~ 174 (456)
T 3m4x_A 97 VGTAAA-AKPGEKVLDLCAAPGGKSTQLAAQMKGKGL-LVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSG 174 (456)
T ss_dssp HHHHHC-CCTTCEEEESSCTTCHHHHHHHHHHTTCSE-EEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTT
T ss_pred HHHHcC-CCCCCEEEEECCCcCHHHHHHHHHcCCCCE-EEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccc
Confidence 334444 455679999999999999999998765 56 999999 8888877653 5788988887442 233
Q ss_pred -CcEEEe
Q 032721 125 -ADAIFM 130 (135)
Q Consensus 125 -~D~~~l 130 (135)
.|+|++
T Consensus 175 ~FD~Il~ 181 (456)
T 3m4x_A 175 FFDRIVV 181 (456)
T ss_dssp CEEEEEE
T ss_pred cCCEEEE
Confidence 498886
No 271
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.63 E-value=2.9e-05 Score=63.73 Aligned_cols=63 Identities=14% Similarity=0.063 Sum_probs=50.7
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC--------CCcEEEecCCCCCCC---C-CcEEEe
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI--------PGVTHIGGDMFKSIP---A-ADAIFM 130 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~--------~rv~~~~gd~~~~~p---~-~D~~~l 130 (135)
..+|||+|||+|.++..+++... .+ ++.+|+ +.+++.++++ ++++++.+|.++.++ . .|+|++
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga-~~-V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~ 615 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGA-RS-TTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFI 615 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTC-SE-EEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCcEEEeeechhHHHHHHHHCCC-CE-EEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEE
Confidence 46999999999999999988432 35 999999 8999888753 379999999987532 2 499987
No 272
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.52 E-value=0.00014 Score=55.38 Aligned_cols=67 Identities=16% Similarity=0.147 Sum_probs=51.5
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCCCCcEEEecCCCCCCCC---CcEEEeccc
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPA---ADAIFMKVH 133 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~~rv~~~~gd~~~~~p~---~D~~~l~~v 133 (135)
.+..++||+|+++|..+..++++ +.+ ++.+|..++-......++|+++.+|.|+..|. .|+++.-.+
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~r--g~~-V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~ 279 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKR--NMW-VYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMV 279 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCE-EEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCS
T ss_pred CCCCEEEEeCcCCCHHHHHHHHC--CCE-EEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCC
Confidence 34579999999999999999987 467 99999754444444568999999999987553 388876443
No 273
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.51 E-value=3.9e-05 Score=62.81 Aligned_cols=96 Identities=18% Similarity=0.111 Sum_probs=59.6
Q ss_pred ccccccCchHHHHHHHHHhccccccHHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHC-------------CCCCeeE
Q 032721 28 YSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKH-------------PFICEGI 94 (135)
Q Consensus 28 ~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~-------------p~l~~~~ 94 (135)
||-+++|+-+-..|.+|+... +.+.+..-.+...|+|||||+|.++...+++. ...+ ++
T Consensus 379 Ye~fekD~vRy~~Y~~AI~~a-------l~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~k-Vy 450 (745)
T 3ua3_A 379 YNTFEQDQIKYDVYGEAVVGA-------LKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVK-LY 450 (745)
T ss_dssp HHHHHHCHHHHHHHHHHHHHH-------HHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEE-EE
T ss_pred HHHHcCChhhHHHHHHHHHHH-------HHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccE-EE
Confidence 555667777777787777652 22222101234689999999999965332221 1224 99
Q ss_pred Eeec-hHHHHhCCC------CCCcEEEecCCCCC-C------CC-CcEEEec
Q 032721 95 NFDL-PEVVAEAPS------IPGVTHIGGDMFKS-I------PA-ADAIFMK 131 (135)
Q Consensus 95 ~~D~-p~~~~~a~~------~~rv~~~~gd~~~~-~------p~-~D~~~l~ 131 (135)
++|. |.++...+. .++|+++.+|+-+- + |+ +|+++--
T Consensus 451 AVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSE 502 (745)
T 3ua3_A 451 IVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSE 502 (745)
T ss_dssp EEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEEC
T ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEe
Confidence 9998 544432221 16899999999554 5 44 6999754
No 274
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.47 E-value=2.2e-05 Score=60.35 Aligned_cols=66 Identities=9% Similarity=-0.019 Sum_probs=51.7
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-------CC-cEEEecCCCCCC----CC-CcEEEec
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-------PG-VTHIGGDMFKSI----PA-ADAIFMK 131 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-------~r-v~~~~gd~~~~~----p~-~D~~~l~ 131 (135)
..+|+|++||+|.+++.++++.++..+++.+|+ |.+++.++++ ++ ++++.+|.++-+ +. .|+|++-
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 478999999999999999998766333999999 9899887753 34 999999985532 22 4888863
No 275
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.40 E-value=0.00039 Score=52.40 Aligned_cols=66 Identities=21% Similarity=0.264 Sum_probs=55.2
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec-hHHHHhCCCC--CCcEEEecCCCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKH-PFICEGINFDL-PEVVAEAPSI--PGVTHIGGDMFK 120 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~-p~~~~~a~~~--~rv~~~~gd~~~ 120 (135)
..++++.+. ..+...+||..+|.|..+.+|+++. |+.+ ++++|. |.+++.++.. +|++++.++|-+
T Consensus 46 l~Evl~~L~-i~pggiyVD~TlG~GGHS~~iL~~lg~~Gr-Vig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~ 115 (347)
T 3tka_A 46 LDEAVNGLN-IRPDGIYIDGTFGRGGHSRLILSQLGEEGR-LLAIDRDPQAIAVAKTIDDPRFSIIHGPFSA 115 (347)
T ss_dssp THHHHHHTC-CCTTCEEEESCCTTSHHHHHHHTTCCTTCE-EEEEESCHHHHHHHTTCCCTTEEEEESCGGG
T ss_pred HHHHHHhhC-CCCCCEEEEeCcCCCHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHhhcCCcEEEEeCCHHH
Confidence 467778776 6666899999999999999999985 7788 999999 9999987532 689999998843
No 276
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.32 E-value=0.00039 Score=50.05 Aligned_cols=76 Identities=16% Similarity=0.151 Sum_probs=53.4
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCC------CCCCcEEEec-CCCCCCCC-
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAP------SIPGVTHIGG-DMFKSIPA- 124 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~------~~~rv~~~~g-d~~~~~p~- 124 (135)
..++.+.+. +....+|||+||++|..+..++.....-+ +.++|+-..-..-+ ...-|+|..+ |+|.--|.
T Consensus 67 L~ei~ek~~-l~~g~~VvDLGaapGGWSq~~a~~~g~~~-V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~ 144 (267)
T 3p8z_A 67 LQWFVERNM-VIPEGRVIDLGCGRGGWSYYCAGLKKVTE-VRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEK 144 (267)
T ss_dssp HHHHHHTTS-SCCCEEEEEESCTTSHHHHHHHTSTTEEE-EEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCC
T ss_pred HHHHHHhcC-CCCCCEEEEcCCCCCcHHHHHHHhcCCCE-EEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCcc
Confidence 345666664 66668999999999999998887776656 99999832211111 1267999999 97654343
Q ss_pred CcEEEe
Q 032721 125 ADAIFM 130 (135)
Q Consensus 125 ~D~~~l 130 (135)
.|++++
T Consensus 145 ~Dtllc 150 (267)
T 3p8z_A 145 CDTLLC 150 (267)
T ss_dssp CSEEEE
T ss_pred ccEEEE
Confidence 588865
No 277
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.24 E-value=0.00013 Score=58.26 Aligned_cols=76 Identities=14% Similarity=0.043 Sum_probs=53.4
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCC------------------CCCeeEEeec-hHHHHhCCCC------
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHP------------------FICEGINFDL-PEVVAEAPSI------ 108 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p------------------~l~~~~~~D~-p~~~~~a~~~------ 108 (135)
..+++..+ .....+|+|.+||+|.++..+.+... ..+ ++++|+ |.++..|+.+
T Consensus 159 ~~mv~~l~-p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~-i~GiEid~~~~~lA~~nl~l~gi 236 (541)
T 2ar0_A 159 KTIIHLLK-PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRA-FIGLELVPGTRRLALMNCLLHDI 236 (541)
T ss_dssp HHHHHHHC-CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTS-EEEEESCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHhc-cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcce-EEEEcCCHHHHHHHHHHHHHhCC
Confidence 34455444 33446999999999999988876532 236 999999 8888877532
Q ss_pred CC-----cEEEecCCCCCC----CCCcEEEec
Q 032721 109 PG-----VTHIGGDMFKSI----PAADAIFMK 131 (135)
Q Consensus 109 ~r-----v~~~~gd~~~~~----p~~D~~~l~ 131 (135)
.. +.+..+|.+... +..|+|+..
T Consensus 237 ~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~N 268 (541)
T 2ar0_A 237 EGNLDHGGAIRLGNTLGSDGENLPKAHIVATN 268 (541)
T ss_dssp CCBGGGTBSEEESCTTSHHHHTSCCEEEEEEC
T ss_pred CccccccCCeEeCCCcccccccccCCeEEEEC
Confidence 32 788999998752 235888763
No 278
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.24 E-value=0.00042 Score=51.13 Aligned_cols=59 Identities=20% Similarity=0.178 Sum_probs=43.1
Q ss_pred CCCcceEEeecC------CCCHHHHHHHHHCC-CCCeeEEeec-hHHHHhCCCCCCcEE-EecCCCCC-CCC-CcEEEec
Q 032721 63 FKGVKRLVDVGG------SAGDCLRMILQKHP-FICEGINFDL-PEVVAEAPSIPGVTH-IGGDMFKS-IPA-ADAIFMK 131 (135)
Q Consensus 63 ~~~~~~vvDvGg------G~G~~~~~l~~~~p-~l~~~~~~D~-p~~~~~a~~~~rv~~-~~gd~~~~-~p~-~D~~~l~ 131 (135)
..+..+|+|+|| |+|. ..+++..| +.+ ++++|+ |. + +++++ +.+|+.+. .+. .|+++..
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~-V~gvDis~~-v------~~v~~~i~gD~~~~~~~~~fD~Vvsn 130 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTL-LVDSDLNDF-V------SDADSTLIGDCATVHTANKWDLIISD 130 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCE-EEEEESSCC-B------CSSSEEEESCGGGCCCSSCEEEEEEC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCE-EEEEECCCC-C------CCCEEEEECccccCCccCcccEEEEc
Confidence 555679999999 4477 44566666 577 999999 55 2 47889 99999764 333 4999863
No 279
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.12 E-value=0.0002 Score=54.62 Aligned_cols=64 Identities=11% Similarity=-0.117 Sum_probs=50.7
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC---------------------CCcEEEecCCCCC--
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI---------------------PGVTHIGGDMFKS-- 121 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~---------------------~rv~~~~gd~~~~-- 121 (135)
..+|+|+|||+|.++..++++.+..+ ++.+|+ |.+++.++++ .+++++.+|..+.
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~-V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEE-VWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSE-EEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCe-EEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 36899999999999999999988888 999999 8888877642 1378888987543
Q ss_pred -CCC-CcEEEe
Q 032721 122 -IPA-ADAIFM 130 (135)
Q Consensus 122 -~p~-~D~~~l 130 (135)
.+. .|++++
T Consensus 127 ~~~~~fD~I~l 137 (378)
T 2dul_A 127 ERHRYFHFIDL 137 (378)
T ss_dssp HSTTCEEEEEE
T ss_pred hccCCCCEEEe
Confidence 222 488875
No 280
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.92 E-value=0.00083 Score=50.89 Aligned_cols=54 Identities=7% Similarity=-0.082 Sum_probs=40.8
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCC---CCCCcEEEecCCCC
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAP---SIPGVTHIGGDMFK 120 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~---~~~rv~~~~gd~~~ 120 (135)
...|+|||.|.|.++..|+++...-+ ++++++ +..++..+ ..++++++.+|+++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~-vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQ-YSLLEKRSSLYKFLNAKFEGSPLQILKRDPYD 116 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSE-EEEECCCHHHHHHHHHHTTTSSCEEECSCTTC
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCE-EEEEecCHHHHHHHHHhccCCCEEEEECCccc
Confidence 37899999999999999998743335 888877 44443322 34789999999964
No 281
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=96.81 E-value=0.0014 Score=54.70 Aligned_cols=66 Identities=12% Similarity=0.015 Sum_probs=46.9
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCC---CCeeEEeec-hHHHHhC--C----C----C--CCcEEEecCCCCC--CC--
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPF---ICEGINFDL-PEVVAEA--P----S----I--PGVTHIGGDMFKS--IP-- 123 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~---l~~~~~~D~-p~~~~~a--~----~----~--~rv~~~~gd~~~~--~p-- 123 (135)
....+|+|.|||+|.++.++++..+. .+ ++++|+ |.+++.| + . . ....+...|+++. .+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~-IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~ 398 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQ-IWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFA 398 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGG-EEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCe-EEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccC
Confidence 34579999999999999999998874 45 999999 7777766 2 1 1 2245666677663 12
Q ss_pred CCcEEEe
Q 032721 124 AADAIFM 130 (135)
Q Consensus 124 ~~D~~~l 130 (135)
..|+++.
T Consensus 399 kFDVVIg 405 (878)
T 3s1s_A 399 NVSVVVM 405 (878)
T ss_dssp TEEEEEE
T ss_pred CCCEEEE
Confidence 2488875
No 282
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=96.79 E-value=0.00032 Score=56.00 Aligned_cols=75 Identities=16% Similarity=0.069 Sum_probs=51.4
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCC---------------CCCeeEEeec-hHHHHhCCCC-------C
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHP---------------FICEGINFDL-PEVVAEAPSI-------P 109 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p---------------~l~~~~~~D~-p~~~~~a~~~-------~ 109 (135)
+..+++.++ -. ..+|+|.+||+|.++.++.+..+ ..+ ++++|+ |.++..|+.+ .
T Consensus 234 v~lmv~ll~-p~-~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~-i~G~Eid~~~~~lA~~Nl~l~gi~~ 310 (544)
T 3khk_A 234 VTLIVEMLE-PY-KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQIS-VYGQESNPTTWKLAAMNMVIRGIDF 310 (544)
T ss_dssp HHHHHHHHC-CC-SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEE-EEECCCCHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHh-cC-CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhce-EEEEeCCHHHHHHHHHHHHHhCCCc
Confidence 444555544 22 24999999999999988765432 345 899999 8888887642 2
Q ss_pred CcEEEecCCCCC--CCC--CcEEEe
Q 032721 110 GVTHIGGDMFKS--IPA--ADAIFM 130 (135)
Q Consensus 110 rv~~~~gd~~~~--~p~--~D~~~l 130 (135)
++.+..+|.+.. .+. .|+|+.
T Consensus 311 ~i~i~~gDtL~~~~~~~~~fD~Iv~ 335 (544)
T 3khk_A 311 NFGKKNADSFLDDQHPDLRADFVMT 335 (544)
T ss_dssp BCCSSSCCTTTSCSCTTCCEEEEEE
T ss_pred ccceeccchhcCcccccccccEEEE
Confidence 455578998865 222 488876
No 283
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=96.78 E-value=0.0008 Score=53.70 Aligned_cols=65 Identities=15% Similarity=0.070 Sum_probs=50.6
Q ss_pred cceEEeecCCCCHHHHHHHHHCC---CCCeeEEeec-hHHHHhCCCC--------CCcEEEecCCCCC-CC---C--CcE
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHP---FICEGINFDL-PEVVAEAPSI--------PGVTHIGGDMFKS-IP---A--ADA 127 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p---~l~~~~~~D~-p~~~~~a~~~--------~rv~~~~gd~~~~-~p---~--~D~ 127 (135)
..+|+|.+||+|.++.++.+... ..+ ++++|+ |.++..|+.+ +++.+..+|.+.. .| . .|+
T Consensus 222 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~-i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 222 GFTLYDATMGSGSLLLNAKRYSRQPQTVV-YFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TCEEEETTCTTSTTGGGHHHHCSCTTTCE-EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCEEeecccchhHHHHHHHHHHHhccCce-EEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 46999999999999999988853 455 999999 8888877642 3578999999875 23 2 498
Q ss_pred EEec
Q 032721 128 IFMK 131 (135)
Q Consensus 128 ~~l~ 131 (135)
|+..
T Consensus 301 IvaN 304 (542)
T 3lkd_A 301 VLMN 304 (542)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8753
No 284
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.70 E-value=0.0014 Score=50.02 Aligned_cols=63 Identities=14% Similarity=0.108 Sum_probs=48.2
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC--------------CCcEEEecCCCCCC---C----
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI--------------PGVTHIGGDMFKSI---P---- 123 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~--------------~rv~~~~gd~~~~~---p---- 123 (135)
.++|+=||||.|..+.++++ +|.-+ ++++|+ |.|++.+++. +|++++.+|.++-+ +
T Consensus 206 pkrVLIIGgGdG~~~revlk-h~~~~-V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVK-LKPKM-VTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHT-TCCSE-EEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCeEEEECCCcHHHHHHHHh-cCCce-eEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 47899999999999999997 55556 999999 9999887531 46888888876432 1
Q ss_pred CCcEEEe
Q 032721 124 AADAIFM 130 (135)
Q Consensus 124 ~~D~~~l 130 (135)
.-|++++
T Consensus 284 ~yDvIIv 290 (381)
T 3c6k_A 284 EFDYVIN 290 (381)
T ss_dssp CEEEEEE
T ss_pred ceeEEEE
Confidence 1377775
No 285
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.60 E-value=0.00095 Score=48.48 Aligned_cols=75 Identities=13% Similarity=0.038 Sum_probs=45.2
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHH--CCCCC-eeEEeechHHHHhCCCCCCc---EEEec-CCCCCCC-CC
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQK--HPFIC-EGINFDLPEVVAEAPSIPGV---THIGG-DMFKSIP-AA 125 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~--~p~l~-~~~~~D~p~~~~~a~~~~rv---~~~~g-d~~~~~p-~~ 125 (135)
.+|-+.+ -+.+..+|||+||+.|..+.-.++. ..... +++..|+ +........+.+ .++.| ||++.-| ..
T Consensus 63 ~EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~~P~~~~~~Gv~~i~~~~G~Df~~~~~~~~ 140 (269)
T 2px2_A 63 RWLVERR-FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HEEPMLMQSYGWNIVTMKSGVDVFYKPSEIS 140 (269)
T ss_dssp HHHHHTT-SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SCCCCCCCSTTGGGEEEECSCCGGGSCCCCC
T ss_pred HHHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-ccCCCcccCCCceEEEeeccCCccCCCCCCC
Confidence 4455555 3667789999999999999988885 21112 1344453 111111111455 55557 9987434 35
Q ss_pred cEEEe
Q 032721 126 DAIFM 130 (135)
Q Consensus 126 D~~~l 130 (135)
|+++.
T Consensus 141 DvVLS 145 (269)
T 2px2_A 141 DTLLC 145 (269)
T ss_dssp SEEEE
T ss_pred CEEEe
Confidence 99875
No 286
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.52 E-value=0.0069 Score=46.18 Aligned_cols=68 Identities=24% Similarity=0.299 Sum_probs=45.0
Q ss_pred cceEEeecCCCCHHHHHH--------HHHC-------CCCCeeEEeechH-----H---HHhCCC----------C-CC-
Q 032721 66 VKRLVDVGGSAGDCLRMI--------LQKH-------PFICEGINFDLPE-----V---VAEAPS----------I-PG- 110 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l--------~~~~-------p~l~~~~~~D~p~-----~---~~~a~~----------~-~r- 110 (135)
.-+|+|+|||+|..+..+ .+++ |+++ +..-|+|. + +...++ . .+
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~-v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFT-AFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEE-EEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCcee-EEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 478999999999766655 4444 6777 88889863 1 222211 0 01
Q ss_pred --cEEEecCCCCC-CCCC--cEEEecccC
Q 032721 111 --VTHIGGDMFKS-IPAA--DAIFMKVHH 134 (135)
Q Consensus 111 --v~~~~gd~~~~-~p~~--D~~~l~~vl 134 (135)
+.-++|.|+.- +|.. |+++.+..|
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aL 160 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSL 160 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCT
T ss_pred eEEEecChhhhcccCCCcceEEEEeccee
Confidence 45667899877 6764 988877654
No 287
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.42 E-value=0.0046 Score=45.82 Aligned_cols=76 Identities=16% Similarity=0.176 Sum_probs=50.1
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeechHH-HHh---CCCC--CCcEEEec-CCCCCCCC-
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEV-VAE---APSI--PGVTHIGG-DMFKSIPA- 124 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~-~~~---a~~~--~rv~~~~g-d~~~~~p~- 124 (135)
...+.+.+. +.....|||+||++|.++..++....--+ +.++|+-.. .+. .++. .-|.++.+ |++.--|.
T Consensus 83 L~ei~~~~~-l~~~~~VlDLGaapGGwsq~~~~~~gv~~-V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~ 160 (321)
T 3lkz_A 83 LRWLVERRF-LEPVGKVIDLGCGRGGWCYYMATQKRVQE-VRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSEC 160 (321)
T ss_dssp HHHHHHTTS-CCCCEEEEEETCTTCHHHHHHTTCTTEEE-EEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCC
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCCCcHHHHHHhhcCCCE-EEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCC
Confidence 345555664 66667999999999999997777766556 999998322 110 1111 34888888 87543333
Q ss_pred CcEEEe
Q 032721 125 ADAIFM 130 (135)
Q Consensus 125 ~D~~~l 130 (135)
.|++++
T Consensus 161 ~D~ivc 166 (321)
T 3lkz_A 161 CDTLLC 166 (321)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 587764
No 288
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.18 E-value=0.004 Score=45.66 Aligned_cols=49 Identities=12% Similarity=0.070 Sum_probs=37.1
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS 107 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~ 107 (135)
..+++.+. .....|+|++||+|..+.++++.. .+ ++++|+ |.+++.|++
T Consensus 226 ~~~i~~~~--~~~~~vlD~f~GsGt~~~~a~~~g--~~-~~g~e~~~~~~~~a~~ 275 (297)
T 2zig_A 226 ERLVRMFS--FVGDVVLDPFAGTGTTLIAAARWG--RR-ALGVELVPRYAQLAKE 275 (297)
T ss_dssp HHHHHHHC--CTTCEEEETTCTTTHHHHHHHHTT--CE-EEEEESCHHHHHHHHH
T ss_pred HHHHHHhC--CCCCEEEECCCCCCHHHHHHHHcC--Ce-EEEEeCCHHHHHHHHH
Confidence 34444432 234799999999999999988864 45 999999 888888764
No 289
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=96.14 E-value=0.0045 Score=45.38 Aligned_cols=44 Identities=16% Similarity=0.076 Sum_probs=35.0
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..++.+.+- +....+|||+|||+|.++..++++.+..+ ++++|+
T Consensus 79 L~ei~eK~~-Lk~~~~VLDLGaAPGGWsQvAa~~~gv~s-V~Gvdv 122 (282)
T 3gcz_A 79 LRWMEERGY-VKPTGIVVDLGCGRGGWSYYAASLKNVKK-VMAFTL 122 (282)
T ss_dssp HHHHHHTTS-CCCCEEEEEETCTTCHHHHHHHTSTTEEE-EEEECC
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHhcCCCe-eeeEEe
Confidence 345566664 66678999999999999999888777666 888887
No 290
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.04 E-value=0.021 Score=43.69 Aligned_cols=68 Identities=15% Similarity=0.153 Sum_probs=45.0
Q ss_pred cceEEeecCCCCHHHHHHHHH-----------------CCCCCeeEEeech-----------HH-HHhC-----CCCCC-
Q 032721 66 VKRLVDVGGSAGDCLRMILQK-----------------HPFICEGINFDLP-----------EV-VAEA-----PSIPG- 110 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~-----------------~p~l~~~~~~D~p-----------~~-~~~a-----~~~~r- 110 (135)
.-+|+|+||++|..+..+... .|+++ ++.-|+| +- .+.. ...+.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~-v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~ 131 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQ-IFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSC 131 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEE-EEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceE-EEecCCCccchHHHHhhhhhhHhhhhhhccCCCCce
Confidence 578999999999877766665 46677 8888988 21 1111 11111
Q ss_pred -cEEEecCCCCC-CCCC--cEEEecccC
Q 032721 111 -VTHIGGDMFKS-IPAA--DAIFMKVHH 134 (135)
Q Consensus 111 -v~~~~gd~~~~-~p~~--D~~~l~~vl 134 (135)
+.-++|.|+.- +|.. |+++.+..|
T Consensus 132 f~~gvpgSFy~rlfp~~S~d~v~Ss~aL 159 (384)
T 2efj_A 132 LIGAMPGSFYSRLFPEESMHFLHSCYCL 159 (384)
T ss_dssp EEEECCSCTTSCCSCTTCEEEEEEESCT
T ss_pred EEEecchhhhhccCCCCceEEEEeccee
Confidence 44567889887 7764 888876654
No 291
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=95.83 E-value=0.0077 Score=44.07 Aligned_cols=43 Identities=16% Similarity=0.079 Sum_probs=31.3
Q ss_pred HHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
.++.+..- +....+|||+|||+|.++..++++.+..+ ++.+|+
T Consensus 64 ~ei~ek~~-l~~~~~VLDLGaAPGGWSQvAa~~~~~~~-v~g~dV 106 (277)
T 3evf_A 64 RWFHERGY-VKLEGRVIDLGCGRGGWCYYAAAQKEVSG-VKGFTL 106 (277)
T ss_dssp HHHHHTTS-SCCCEEEEEETCTTCHHHHHHHTSTTEEE-EEEECC
T ss_pred HHHHHhCC-CCCCCEEEEecCCCCHHHHHHHHhcCCCc-ceeEEE
Confidence 34444443 56667999999999999998888766545 666665
No 292
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=95.58 E-value=0.0071 Score=43.72 Aligned_cols=34 Identities=24% Similarity=0.322 Sum_probs=26.5
Q ss_pred CcceEEeecCCCCHHHHHHHHH-------CCC-----CCeeEEeec-h
Q 032721 65 GVKRLVDVGGSAGDCLRMILQK-------HPF-----ICEGINFDL-P 99 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~-------~p~-----l~~~~~~D~-p 99 (135)
+..+|+|||+|+|.-+..+++. .|+ ++ ++.+|. |
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~-~isiE~~p 106 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLH-FISFEKFP 106 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEE-EEEEESSC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeE-EEEEECCc
Confidence 3479999999999877776654 674 56 898987 5
No 293
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.22 E-value=0.0089 Score=44.83 Aligned_cols=55 Identities=18% Similarity=0.177 Sum_probs=45.7
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCC---------------------------CCCcEEEecC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPS---------------------------IPGVTHIGGD 117 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~---------------------------~~rv~~~~gd 117 (135)
+...||.+|||.......+...+|+++ ++-+|+|++++.-++ .++..+++.|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~-~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLA-YVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEE-EEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCE-EEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 457999999999999999999888888 888999988765321 1578999999
Q ss_pred CCC
Q 032721 118 MFK 120 (135)
Q Consensus 118 ~~~ 120 (135)
+.+
T Consensus 176 L~d 178 (334)
T 1rjd_A 176 LND 178 (334)
T ss_dssp TTC
T ss_pred CCC
Confidence 976
No 294
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=94.91 E-value=0.011 Score=39.33 Aligned_cols=55 Identities=7% Similarity=-0.042 Sum_probs=40.6
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC--CCcEEEecCCCCC-C---CC--CcEEEeccc
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI--PGVTHIGGDMFKS-I---PA--ADAIFMKVH 133 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~--~rv~~~~gd~~~~-~---p~--~D~~~l~~v 133 (135)
.....+|+|||||. - . +|. +.+++.|++. .+++++.+|+.+. . +. .|+++...+
T Consensus 10 ~~~g~~vL~~~~g~--------------v-~--vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~ 72 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS--------------S-P--VEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLV 72 (176)
T ss_dssp CCTTSEEEEEECTT--------------S-C--HHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCS
T ss_pred CCCCCEEEEecCCc--------------e-e--eeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECCh
Confidence 55668999999985 1 2 888 8888887653 3699999998543 3 33 399998776
Q ss_pred C
Q 032721 134 H 134 (135)
Q Consensus 134 l 134 (135)
|
T Consensus 73 l 73 (176)
T 2ld4_A 73 P 73 (176)
T ss_dssp T
T ss_pred h
Confidence 5
No 295
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=94.76 E-value=0.044 Score=41.96 Aligned_cols=90 Identities=20% Similarity=0.327 Sum_probs=49.2
Q ss_pred chHHHHHHHHHhccccccHHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHC---C----CCCeeEEeechHHHHhCC-
Q 032721 35 PEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKH---P----FICEGINFDLPEVVAEAP- 106 (135)
Q Consensus 35 ~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~---p----~l~~~~~~D~p~~~~~a~- 106 (135)
|+....|.+....+-. .+.+... .+..-.||++|.|+|.++.-+++.. | .++ .+++|..+.+...+
T Consensus 55 peis~~FGe~la~~~~----~~w~~~g-~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~-y~iVE~Sp~Lr~~Q~ 128 (387)
T 1zkd_A 55 PEISQMFGELLGLWSA----SVWKAAD-EPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLS-VHLVEINPVLRQKQQ 128 (387)
T ss_dssp HHHCHHHHHHHHHHHH----HHHHHTT-CCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEE-EEEECCCHHHHHHHH
T ss_pred CchHHHHHHHHHHHHH----HHHHHcC-CCCCcEEEEECCCcchHHHHHHHHHHhCCccccccE-EEEEecCHHHHHHHH
Confidence 5555566665544321 1112222 3344589999999999998887652 2 345 89999844443221
Q ss_pred ----CCCCcEEEecCCCCCCCCCcEEEecc
Q 032721 107 ----SIPGVTHIGGDMFKSIPAADAIFMKV 132 (135)
Q Consensus 107 ----~~~rv~~~~gd~~~~~p~~D~~~l~~ 132 (135)
..++|.+. |-++++|....+++.|
T Consensus 129 ~~L~~~~~v~W~--~~l~~lp~~~~~viAN 156 (387)
T 1zkd_A 129 TLLAGIRNIHWH--DSFEDVPEGPAVILAN 156 (387)
T ss_dssp HHSTTCSSEEEE--SSGGGSCCSSEEEEEE
T ss_pred HHhcCCCCeEEe--CChhhcCCCCeEEEec
Confidence 11345554 2234455444444443
No 296
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=94.14 E-value=0.03 Score=41.33 Aligned_cols=35 Identities=14% Similarity=0.250 Sum_probs=29.5
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
+.+..++||+||++|.++..++++.+-.. ++++|+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~s-V~Gvdl 113 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMS-VKGYTL 113 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEE-EEEECC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCce-eeeEEe
Confidence 45668999999999999999998766556 778887
No 297
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=93.96 E-value=0.069 Score=40.46 Aligned_cols=70 Identities=19% Similarity=0.290 Sum_probs=43.2
Q ss_pred CCcceEEeecCCCCHHH--------HHHHHH--------CCCCCeeEEeechH-----HHHhCCC---CCC---cEEEec
Q 032721 64 KGVKRLVDVGGSAGDCL--------RMILQK--------HPFICEGINFDLPE-----VVAEAPS---IPG---VTHIGG 116 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~--------~~l~~~--------~p~l~~~~~~D~p~-----~~~~a~~---~~r---v~~~~g 116 (135)
++.-+|+|+||++|..+ ..+.++ .|.++ ++.-|+|. +....+. ..+ +.-++|
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~-v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpg 128 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQ-IFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPG 128 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEE-EEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEES
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceE-EEecCCCchHHHHHHHhcchhcccCCCEEEEecch
Confidence 44578999999999533 334332 45666 88889862 2222221 012 445678
Q ss_pred CCCCC-CCCC--cEEEecccC
Q 032721 117 DMFKS-IPAA--DAIFMKVHH 134 (135)
Q Consensus 117 d~~~~-~p~~--D~~~l~~vl 134 (135)
.|+.- +|.. |+++.+..|
T Consensus 129 SFy~rlfp~~S~d~v~Ss~aL 149 (359)
T 1m6e_X 129 SFYGRLFPRNTLHFIHSSYSL 149 (359)
T ss_dssp CSSSCCSCTTCBSCEEEESCT
T ss_pred hhhhccCCCCceEEEEehhhh
Confidence 99887 7763 888766544
No 298
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=93.66 E-value=0.12 Score=39.54 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=33.2
Q ss_pred CCcceEEeecCCCCHHHHHHH-HHCCC-CCeeEEeec-hHHHHhC
Q 032721 64 KGVKRLVDVGGSAGDCLRMIL-QKHPF-ICEGINFDL-PEVVAEA 105 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~-~~~p~-l~~~~~~D~-p~~~~~a 105 (135)
.+..+++|||++.|.++..++ +..+. .+ ++.++. |...+..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~-V~afEP~p~~~~~L 268 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFER-VWMIEPDRINLQTL 268 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSE-EEEECCCHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCE-EEEEcCCHHHHHHH
Confidence 456899999999999999888 66776 56 999998 7666543
No 299
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=93.08 E-value=0.19 Score=35.00 Aligned_cols=52 Identities=8% Similarity=0.007 Sum_probs=35.8
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC---------CCCcEEEecCCC
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS---------IPGVTHIGGDMF 119 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~---------~~rv~~~~gd~~ 119 (135)
.+.++|+++|+| . +.....+.++-+ ++.+|. ++..+.|++ .++|+++.||..
T Consensus 29 ~~a~~VLEiGtG--y-STl~lA~~~~g~-VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~ 90 (202)
T 3cvo_A 29 EEAEVILEYGSG--G-STVVAAELPGKH-VTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIG 90 (202)
T ss_dssp HHCSEEEEESCS--H-HHHHHHTSTTCE-EEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCS
T ss_pred hCCCEEEEECch--H-HHHHHHHcCCCE-EEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCch
Confidence 345799999984 4 444444455666 999997 777666553 247999999954
No 300
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.18 E-value=0.17 Score=36.20 Aligned_cols=49 Identities=14% Similarity=0.093 Sum_probs=36.2
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAP 106 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~ 106 (135)
...+++.+- .+...|+|..||+|..+.+..+.. .+ ++++|+ |..++.++
T Consensus 202 ~~~~i~~~~--~~~~~vlD~f~GsGtt~~~a~~~g--r~-~ig~e~~~~~~~~~~ 251 (260)
T 1g60_A 202 IERIIRASS--NPNDLVLDCFMGSGTTAIVAKKLG--RN-FIGCDMNAEYVNQAN 251 (260)
T ss_dssp HHHHHHHHC--CTTCEEEESSCTTCHHHHHHHHTT--CE-EEEEESCHHHHHHHH
T ss_pred HHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHcC--Ce-EEEEeCCHHHHHHHH
Confidence 344444432 234799999999999999988873 45 999999 77777664
No 301
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=91.49 E-value=0.45 Score=34.73 Aligned_cols=32 Identities=16% Similarity=-0.076 Sum_probs=25.1
Q ss_pred cceEEeecCCCCHHHHHHHHHC-----CCCCeeEEeec
Q 032721 66 VKRLVDVGGSAGDCLRMILQKH-----PFICEGINFDL 98 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~-----p~l~~~~~~D~ 98 (135)
.+.||++|+..|.-+..+++.. |+-+ ++++|.
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~k-I~~~Dt 143 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRT-VWVADS 143 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCC-EEEEEC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCE-EEEEEC
Confidence 4799999999998777766543 4666 999994
No 302
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=91.11 E-value=0.14 Score=40.62 Aligned_cols=76 Identities=8% Similarity=-0.070 Sum_probs=49.6
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCC-------------CCCeeEEeec-hHHHHhCCCC------CCcE
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHP-------------FICEGINFDL-PEVVAEAPSI------PGVT 112 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p-------------~l~~~~~~D~-p~~~~~a~~~------~rv~ 112 (135)
+..+++.++ -....+|+|-.||+|.++.+..+... ... +.++|+ +.+...|+-+ +.-.
T Consensus 206 v~lmv~l~~-p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~-i~G~E~~~~~~~la~mNl~lhg~~~~~ 283 (530)
T 3ufb_A 206 VRFMVEVMD-PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESS-IFGGEAKSLPYLLVQMNLLLHGLEYPR 283 (530)
T ss_dssp HHHHHHHHC-CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCC-EEEECCSHHHHHHHHHHHHHHTCSCCE
T ss_pred HHHHHHhhc-cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhh-hhhhhccHHHHHHHHHHHHhcCCcccc
Confidence 444555554 33446999999999999987765321 345 899999 7777776532 3445
Q ss_pred EEecCCCCC-C----C--CCcEEEe
Q 032721 113 HIGGDMFKS-I----P--AADAIFM 130 (135)
Q Consensus 113 ~~~gd~~~~-~----p--~~D~~~l 130 (135)
+..+|.+.. . + ..|+|+.
T Consensus 284 I~~~dtL~~~~~~~~~~~~fD~Il~ 308 (530)
T 3ufb_A 284 IDPENSLRFPLREMGDKDRVDVILT 308 (530)
T ss_dssp EECSCTTCSCGGGCCGGGCBSEEEE
T ss_pred ccccccccCchhhhcccccceEEEe
Confidence 667887753 1 1 2488765
No 303
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=89.80 E-value=0.3 Score=36.42 Aligned_cols=65 Identities=11% Similarity=0.036 Sum_probs=45.9
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-CCcEEEecCCCCC----CC--CCcEEEec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS----IP--AADAIFMK 131 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-~rv~~~~gd~~~~----~p--~~D~~~l~ 131 (135)
.+++|+-||.|.+..++.++.-..+.+..+|. +.+++..+.+ +...++.+|..+- ++ ..|+++..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~g 75 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMS 75 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEEC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEc
Confidence 47999999999999999987532222677898 7777776654 4556777887543 22 34777753
No 304
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=87.37 E-value=0.27 Score=36.33 Aligned_cols=54 Identities=15% Similarity=0.193 Sum_probs=40.5
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCC-CCeeEEeechHHHHhCCC---------CCCcEEEecCCCCC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPF-ICEGINFDLPEVVAEAPS---------IPGVTHIGGDMFKS 121 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~-l~~~~~~D~p~~~~~a~~---------~~rv~~~~gd~~~~ 121 (135)
+...||++|||-=.....+. +|. ++ ++-+|.|.+++..++ .++..+++.|+.+.
T Consensus 102 g~~QvV~LGaGlDTra~Rl~--~~~~~~-v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~ 165 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLD--WPTGTT-VYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQD 165 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSC--CCTTCE-EEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSC
T ss_pred CCCeEEEeCCCCCchhhhcc--CCCCcE-EEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhh
Confidence 34679999999988866664 353 66 888999998876432 36788999999763
No 305
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=84.09 E-value=0.3 Score=35.76 Aligned_cols=61 Identities=13% Similarity=-0.026 Sum_probs=48.4
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC----CCcEEEecCCCCC----CCC---CcEEEe
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI----PGVTHIGGDMFKS----IPA---ADAIFM 130 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~----~rv~~~~gd~~~~----~p~---~D~~~l 130 (135)
..++|+=+|||.++.+.++ +.-+ ++.+|+ |..++..+++ ++++++..|.++. .|. .|+|++
T Consensus 93 ~~~LDlfaGSGaLgiEaLS--~~d~-~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfi 165 (283)
T 2oo3_A 93 NSTLSYYPGSPYFAINQLR--SQDR-LYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFI 165 (283)
T ss_dssp SSSCCEEECHHHHHHHHSC--TTSE-EEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEE
T ss_pred CCceeEeCCcHHHHHHHcC--CCCe-EEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEE
Confidence 5689999999999999999 3445 999999 8888777665 5799999997654 232 488876
No 306
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=83.39 E-value=1.9 Score=32.56 Aligned_cols=51 Identities=10% Similarity=0.107 Sum_probs=38.9
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-CCcEEEecCCCC
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFK 120 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-~rv~~~~gd~~~ 120 (135)
+++|+-||.|.++..+.++. .+-+..+|. +.+++..+.+ +...++.+|..+
T Consensus 4 ~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~ 56 (376)
T 3g7u_A 4 NVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSL 56 (376)
T ss_dssp EEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGG
T ss_pred eEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCCCCceEecChhh
Confidence 79999999999999999874 442457888 7777665544 567777888754
No 307
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=82.99 E-value=4 Score=27.39 Aligned_cols=58 Identities=12% Similarity=0.053 Sum_probs=41.7
Q ss_pred HHHHHHHHHhccccccHHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 37 MNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 37 ~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
+..+|.+-|...... .+..++.+.+. ..-|+|+|=|.|..=..+.+.+|+-+ +.+||.
T Consensus 15 RLDsfirRltaQR~~-L~~a~~~v~~~--~GpVlElGLGNGRTydHLRe~~P~R~-I~vfDR 72 (174)
T 3iht_A 15 RLDLFIDRMVSQRAC-LEHAIAQTAGL--SGPVYELGLGNGRTYHHLRQHVQGRE-IYVFER 72 (174)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHTTTC--CSCEEEECCTTCHHHHHHHHHCCSSC-EEEEES
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHhcCC--CCceEEecCCCChhHHHHHHhCCCCc-EEEEEe
Confidence 446677766654432 23333333312 26799999999999999999999999 999995
No 308
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=82.89 E-value=0.87 Score=34.34 Aligned_cols=67 Identities=18% Similarity=0.050 Sum_probs=46.6
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC------------CCCcEEEecCCCCC---CCC-C
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS------------IPGVTHIGGDMFKS---IPA-A 125 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~------------~~rv~~~~gd~~~~---~p~-~ 125 (135)
.....+|+|+++|.|.=+..|++..++-. ++..|+ +..+...++ ..++.+...|.... .+. .
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~-l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRN-LAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEE-EEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCc-EEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 44557999999999999999998777656 899998 655543321 14677887776432 233 3
Q ss_pred cEEEe
Q 032721 126 DAIFM 130 (135)
Q Consensus 126 D~~~l 130 (135)
|.|++
T Consensus 225 D~VLl 229 (359)
T 4fzv_A 225 DRVLV 229 (359)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 77765
No 309
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=81.75 E-value=1.6 Score=32.34 Aligned_cols=61 Identities=13% Similarity=0.018 Sum_probs=40.2
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-CCcEEEecCCCCC----CCCCcEEEec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS----IPAADAIFMK 131 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-~rv~~~~gd~~~~----~p~~D~~~l~ 131 (135)
.+++|+-||.|.++.++.++. .+.+..+|. +.+++..+.+ +... .+|..+- +|..|+++..
T Consensus 12 ~~~~dLFaG~Gg~~~g~~~aG--~~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 12 LRFIDLFAGLGGFRLALESCG--AECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp CEEEEETCTTTHHHHHHHHTT--CEEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEE
T ss_pred CcEEEECCCcCHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEEC
Confidence 589999999999999998863 442566788 7776665443 2211 4666432 4445777653
No 310
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=81.13 E-value=7.6 Score=24.80 Aligned_cols=63 Identities=17% Similarity=0.076 Sum_probs=36.8
Q ss_pred ceEEeecCCC-CHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC-------CCCCcEEEec
Q 032721 67 KRLVDVGGSA-GDCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-------IPAADAIFMK 131 (135)
Q Consensus 67 ~~vvDvGgG~-G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-------~p~~D~~~l~ 131 (135)
.+|+=+|+|. |......+.+. +.+ ++++|. ++.++.++....+..+.+|..+. +..+|+++..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-g~~-V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~ 91 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-GHS-VVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAF 91 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCE-EEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCe-EEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence 5788788643 33333333333 346 999998 77777665233556677776432 2235877753
No 311
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=79.88 E-value=2.5 Score=26.54 Aligned_cols=60 Identities=10% Similarity=0.083 Sum_probs=37.8
Q ss_pred ceEEeecCCCCHHHHHHHHHCC--CCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC-------CCCCcEEEe
Q 032721 67 KRLVDVGGSAGDCLRMILQKHP--FICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-------IPAADAIFM 130 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p--~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-------~p~~D~~~l 130 (135)
.+++=+|+ |.++..+++..- +.+ ++++|. ++.++.+.. ..+.++.+|..++ +..+|+++.
T Consensus 7 ~~v~I~G~--G~iG~~la~~L~~~g~~-V~~id~~~~~~~~~~~-~~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 7 YEYIVIGS--EAAGVGLVRELTAAGKK-VLAVDKSKEKIELLED-EGFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHH-TTCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCe-EEEEECCHHHHHHHHH-CCCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 46777887 445554444322 457 999998 776665543 3577888888654 224687765
No 312
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=79.84 E-value=1.4 Score=32.86 Aligned_cols=31 Identities=26% Similarity=0.329 Sum_probs=26.1
Q ss_pred ceEEeecCCCCHHHHH--HHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRM--ILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~--l~~~~p~l~~~~~~D~ 98 (135)
++||=||+|.+.+..+ |++..++++ ++++|.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~-Vtlie~ 35 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIE-VTLIEP 35 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSE-EEEECS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCe-EEEEeC
Confidence 6899999999876555 778888899 999995
No 313
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=78.61 E-value=1.7 Score=32.36 Aligned_cols=60 Identities=22% Similarity=0.256 Sum_probs=38.0
Q ss_pred CCCcceEEeecC------CCCHHHHHHHHHCCC-CCeeEEeechHHHHhCCCCCCcEEEecCCCCCCC-C-CcEEEe
Q 032721 63 FKGVKRLVDVGG------SAGDCLRMILQKHPF-ICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIP-A-ADAIFM 130 (135)
Q Consensus 63 ~~~~~~vvDvGg------G~G~~~~~l~~~~p~-l~~~~~~D~p~~~~~a~~~~rv~~~~gd~~~~~p-~-~D~~~l 130 (135)
.+...+|+|+|. .+|.. .+.+..|. .. ++..|+-++...+. .++.||+.+... . .|+|+.
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~-VVavDL~~~~sda~-----~~IqGD~~~~~~~~k~DLVIS 175 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTL-LVDSDLNDFVSDAD-----STLIGDCATVHTANKWDLIIS 175 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCE-EEEEESSCCBCSSS-----EEEESCGGGEEESSCEEEEEE
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcE-EEEeeCcccccCCC-----eEEEccccccccCCCCCEEEe
Confidence 344579999995 77873 44455676 57 89999855443221 447889755422 2 388764
No 314
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=75.15 E-value=2.3 Score=31.39 Aligned_cols=52 Identities=13% Similarity=0.109 Sum_probs=38.0
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCC----CeeEEeec-hHHHHhCCCCCCcEEEecCCCC
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFI----CEGINFDL-PEVVAEAPSIPGVTHIGGDMFK 120 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l----~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~ 120 (135)
...|+=||||.|..+.-+.+.+|++ + .+++|. |. .......++|..+.. |++
T Consensus 61 ~~~VVYVGSApG~HL~~L~~~fp~~f~~ik-WvLiDPap~-~~~l~~~~NV~li~~-fvd 117 (307)
T 3mag_A 61 GATVVYIGSAPGTHIRYLRDHFYNLGVIIK-WMLIDGRHH-DPILNGLRDVTLVTR-FVD 117 (307)
T ss_dssp TCEEEEESCCSCHHHHHHHHHHHHTTCCCE-EEEEESSCC-CGGGTTCTTEEEEEC-CCC
T ss_pred CcEEEEecccCccHHHHHHHhchhhCCCeE-EEEEcCCcc-hhhhcCCCcEEEEec-cCC
Confidence 4699999999999999999998874 6 999997 32 222223367777764 654
No 315
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=74.23 E-value=2.2 Score=33.05 Aligned_cols=57 Identities=23% Similarity=0.371 Sum_probs=35.3
Q ss_pred CchHHHHHHHHHhccccccHHHHhccCCCCCCcceEEeecCCCCHHHHHHHHHCCC----CCeeEEeec
Q 032721 34 KPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPF----ICEGINFDL 98 (135)
Q Consensus 34 ~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~~~~~l~~~~p~----l~~~~~~D~ 98 (135)
.|+....|.+....+-. .+.+.. +..+||++|.|+|.++.-+++.... ..+.++++.
T Consensus 114 APeiS~~FGe~la~~~~----~~~~~~----g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~ 174 (432)
T 4f3n_A 114 APELSPLFAQTLARPVA----QALDAS----GTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDL 174 (432)
T ss_dssp CGGGHHHHHHHHHHHHH----HHHHHH----TCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECT
T ss_pred chhhhHHHHHHHHHHHH----HHHHhc----CCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEc
Confidence 36677777666655321 111111 1258999999999988888754321 113888887
No 316
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=73.99 E-value=3.2 Score=30.94 Aligned_cols=94 Identities=10% Similarity=0.131 Sum_probs=57.2
Q ss_pred CCcccccccCc--hHHHHHHHHHhccccccHHHHhccC-CCCCCcceEEeecCCCCHHHHHHHHH-CCCCCeeEEeechH
Q 032721 25 EPAYSYYGKKP--EMNGLMRKAMSGVSVPFMTSVLDGY-DGFKGVKRLVDVGGSAGDCLRMILQK-HPFICEGINFDLPE 100 (135)
Q Consensus 25 ~~~~e~~~~~~--~~~~~f~~~m~~~~~~~~~~~~~~~-~~~~~~~~vvDvGgG~G~~~~~l~~~-~p~l~~~~~~D~p~ 100 (135)
.++++++-..+ ...-..++++...+... ..+++.+ ....+...||-+|||.=.....+... .++++ ..-+|+|+
T Consensus 48 Dpf~~~Fv~~~~~rr~P~inrG~~~Rt~~i-D~~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~-~~EVD~P~ 125 (334)
T 3iei_A 48 DPYIQHFVRLSKERKAPEINRGYFARVHGV-SQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSK-YFEVDFPM 125 (334)
T ss_dssp CSSGGGTSCCCCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSE-EEEEECHH
T ss_pred CHHHHHHcCcccCCCCchHHHHHHHHHHHH-HHHHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCe-EEECCcHH
Confidence 34555544322 33334555555544432 2233222 10123478999999999988888875 35677 88889998
Q ss_pred HHHhCC-----------------------------CCCCcEEEecCCCC
Q 032721 101 VVAEAP-----------------------------SIPGVTHIGGDMFK 120 (135)
Q Consensus 101 ~~~~a~-----------------------------~~~rv~~~~gd~~~ 120 (135)
+++.=+ ..++..+++.|+.+
T Consensus 126 vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~~DL~d 174 (334)
T 3iei_A 126 IVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRD 174 (334)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEECCTTC
T ss_pred HHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEcccccc
Confidence 876411 12678899999976
No 317
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=72.89 E-value=2.7 Score=31.37 Aligned_cols=65 Identities=14% Similarity=0.141 Sum_probs=46.5
Q ss_pred ceEEeecCCCCHHHHHHHHHCCC----CCeeEEeechHHHHhCCCCCCcEEEecCCCCC--CC-------CCcEEEeccc
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPF----ICEGINFDLPEVVAEAPSIPGVTHIGGDMFKS--IP-------AADAIFMKVH 133 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~----l~~~~~~D~p~~~~~a~~~~rv~~~~gd~~~~--~p-------~~D~~~l~~v 133 (135)
..||=+|.+.|....-|.+.+|+ ++ .+++|..+-....+..++|+++. +||++ +. ..++++++-|
T Consensus 77 ~~VVYaGsAPG~HI~fL~~lF~~l~~~lk-wvLiDp~~f~~~Le~~~ni~li~-~ffde~~i~~l~~~~~~~~vLfISDI 154 (348)
T 1vpt_A 77 ATVVYIGSAPGTHIRYLRDHFYNLGVIIK-WMLIDGRHHDPILNGLRDVTLVT-RFVDEEYLRSIKKQLHPSKIILISDV 154 (348)
T ss_dssp CEEEEESCSSCHHHHHHHHHHHHTTCCCE-EEEEESSCCCGGGTTCTTEEEEE-CCCCHHHHHHHHHHHTTSCEEEEECC
T ss_pred CeEEEeCcCCcchHHHHHHHhhhcCCceE-EEEECCCchhhhhcCCCcEEeeh-hhcCHHHHHHHHHHhcCCCEEEEEec
Confidence 49999999999999999998887 56 99999733333334446788876 57765 11 1377777654
No 318
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=70.83 E-value=13 Score=21.95 Aligned_cols=60 Identities=20% Similarity=0.091 Sum_probs=36.0
Q ss_pred ceEEeecCCCCHHHHHHHH---HCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC------CCCCcEEEe
Q 032721 67 KRLVDVGGSAGDCLRMILQ---KHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS------IPAADAIFM 130 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~---~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~------~p~~D~~~l 130 (135)
.+|+=+|+ |.++..+++ +.+..+ ++++|. ++.++... ..++.+..+|+.+. +...|+++.
T Consensus 6 ~~v~I~G~--G~iG~~~~~~l~~~g~~~-v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 6 WNICVVGA--GKIGQMIAALLKTSSNYS-VTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp EEEEEECC--SHHHHHHHHHHHHCSSEE-EEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CeEEEECC--CHHHHHHHHHHHhCCCce-EEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 46777776 555544433 344356 899998 65555443 34677788887643 223587764
No 319
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=70.67 E-value=6.8 Score=27.40 Aligned_cols=63 Identities=10% Similarity=-0.081 Sum_probs=36.9
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec---hHHHHhCCCCCCcEEEecCCCCC-CCCCcEEEec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL---PEVVAEAPSIPGVTHIGGDMFKS-IPAADAIFMK 131 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~---p~~~~~a~~~~rv~~~~gd~~~~-~p~~D~~~l~ 131 (135)
.+||=||||.=.....-.-..-+.+ +++++. +...+.+ +..+++++.++|-.. +..+|+++..
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~-VtVvap~~~~~l~~l~-~~~~i~~i~~~~~~~dL~~adLVIaA 98 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAA-ITVVAPTVSAEINEWE-AKGQLRVKRKKVGEEDLLNVFFIVVA 98 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCC-EEEECSSCCHHHHHHH-HTTSCEEECSCCCGGGSSSCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCE-EEEECCCCCHHHHHHH-HcCCcEEEECCCCHhHhCCCCEEEEC
Confidence 6788899875443332222222456 888874 2322222 235788888877544 6667888754
No 320
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=70.54 E-value=3.7 Score=27.92 Aligned_cols=59 Identities=15% Similarity=0.164 Sum_probs=36.9
Q ss_pred EEeecCCCCHHHHHHHHHC--CCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC-------CCCCcEEEe
Q 032721 69 LVDVGGSAGDCLRMILQKH--PFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-------IPAADAIFM 130 (135)
Q Consensus 69 vvDvGgG~G~~~~~l~~~~--p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-------~p~~D~~~l 130 (135)
|+=+|+ |.++..+++.. .+.+ ++++|. ++.++.......+.++.||..++ +..+|+++.
T Consensus 3 iiIiG~--G~~G~~la~~L~~~g~~-v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 3 VIIIGG--ETTAYYLARSMLSRKYG-VVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVI 71 (218)
T ss_dssp EEEECC--HHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred EEEECC--CHHHHHHHHHHHhCCCe-EEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence 454564 66665555432 2457 999998 77666543324577888998653 234687765
No 321
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=68.50 E-value=9.8 Score=25.49 Aligned_cols=57 Identities=23% Similarity=0.135 Sum_probs=37.3
Q ss_pred EEeecCCCCHHHHHHHHHCCC--CCeeEEeec-hHHHHhCCCCCCcEEEecCCCC-C--C----CCCcEEEe
Q 032721 69 LVDVGGSAGDCLRMILQKHPF--ICEGINFDL-PEVVAEAPSIPGVTHIGGDMFK-S--I----PAADAIFM 130 (135)
Q Consensus 69 vvDvGgG~G~~~~~l~~~~p~--l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~-~--~----p~~D~~~l 130 (135)
|+=. ||+|.++..++++.-. .+ ++++++ +... ....+++++.+|+.+ . + ...|+++.
T Consensus 3 ilIt-GatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~ 69 (219)
T 3dqp_A 3 IFIV-GSTGRVGKSLLKSLSTTDYQ-IYAGARKVEQV---PQYNNVKAVHFDVDWTPEEMAKQLHGMDAIIN 69 (219)
T ss_dssp EEEE-STTSHHHHHHHHHHTTSSCE-EEEEESSGGGS---CCCTTEEEEECCTTSCHHHHHTTTTTCSEEEE
T ss_pred EEEE-CCCCHHHHHHHHHHHHCCCE-EEEEECCccch---hhcCCceEEEecccCCHHHHHHHHcCCCEEEE
Confidence 4434 5688888888776644 34 888888 4322 223789999999987 3 2 22477764
No 322
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=68.48 E-value=3.9 Score=30.96 Aligned_cols=31 Identities=19% Similarity=0.149 Sum_probs=25.2
Q ss_pred ceEEeecCCCCHHH--HHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCL--RMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~--~~l~~~~p~l~~~~~~D~ 98 (135)
++||=||||.+.+. ..|.+..|+.+ +|++|.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~-VtlI~~ 35 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLK-ITLISD 35 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCE-EEEECS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCe-EEEEcC
Confidence 47999999998654 45777788899 999985
No 323
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=67.88 E-value=6.9 Score=28.55 Aligned_cols=64 Identities=14% Similarity=0.133 Sum_probs=35.8
Q ss_pred ceEEeecCCC--CHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCC-CCCCCcEEEec
Q 032721 67 KRLVDVGGSA--GDCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFK-SIPAADAIFMK 131 (135)
Q Consensus 67 ~~vvDvGgG~--G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~-~~p~~D~~~l~ 131 (135)
.+|.=||+|. +.++..+++.....+ ++++|. ++.++.+.+..-+.-...|.-+ .+..+|++++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~-V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVila 101 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGK-IYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS 101 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSE-EEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCE-EEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEe
Confidence 5788888653 234445555433236 999998 7676665443222222234423 24457888874
No 324
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=67.79 E-value=4.8 Score=29.78 Aligned_cols=64 Identities=13% Similarity=0.022 Sum_probs=41.9
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCee-EEeec-hHHHHhCCCC-CCcEEEecCCCCC----CC--CCcEEEec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEG-INFDL-PEVVAEAPSI-PGVTHIGGDMFKS----IP--AADAIFMK 131 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~-~~~D~-p~~~~~a~~~-~rv~~~~gd~~~~----~p--~~D~~~l~ 131 (135)
-+++|+-||.|.+...+.+..-..+-+ ..+|. +.+++..+.+ +.. ++.+|..+- +| ..|+++.+
T Consensus 11 ~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~~i~~~~~Dil~gg 83 (327)
T 3qv2_A 11 VNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIKQIESLNCNTWFMS 83 (327)
T ss_dssp EEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHHHHHHTCCCEEEEC
T ss_pred CEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHHHhccCCCCEEEec
Confidence 589999999999999999874323413 48898 7776665443 222 456676442 23 24777653
No 325
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=67.72 E-value=7.6 Score=27.80 Aligned_cols=50 Identities=12% Similarity=0.181 Sum_probs=32.8
Q ss_pred EEeecCCCCHHHHHHHHHC---CCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCC
Q 032721 69 LVDVGGSAGDCLRMILQKH---PFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFK 120 (135)
Q Consensus 69 vvDvGgG~G~~~~~l~~~~---p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~ 120 (135)
|+=. ||+|.++..++++. ++.+ +++++. +...+......+++++.+|+.+
T Consensus 3 vlVt-GatG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~D~~~ 56 (345)
T 2bll_A 3 VLIL-GVNGFIGNHLTERLLREDHYE-VYGLDIGSDAISRFLNHPHFHFVEGDISI 56 (345)
T ss_dssp EEEE-TCSSHHHHHHHHHHHHSTTCE-EEEEESCCGGGGGGTTCTTEEEEECCTTT
T ss_pred EEEE-CCCcHHHHHHHHHHHHhCCCE-EEEEeCCcchHHHhhcCCCeEEEeccccC
Confidence 4434 56888877776543 4566 888887 4333332334689999999975
No 326
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=66.60 E-value=8.8 Score=24.10 Aligned_cols=61 Identities=20% Similarity=0.163 Sum_probs=38.7
Q ss_pred ceEEeecCCC-CHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC-------CCCCcEEEe
Q 032721 67 KRLVDVGGSA-GDCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-------IPAADAIFM 130 (135)
Q Consensus 67 ~~vvDvGgG~-G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-------~p~~D~~~l 130 (135)
.+++=+|+|. |......+.+. +.+ ++++|. ++.++.++. ..+.++.||..++ +..+|++++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-g~~-v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-DIP-LVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCC-EEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHC-CCC-EEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 5677788754 43333333332 457 999998 777776654 4677888998654 123687765
No 327
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=66.52 E-value=4.5 Score=29.59 Aligned_cols=51 Identities=12% Similarity=0.143 Sum_probs=34.0
Q ss_pred ceEEeecCCCCHHHHHHHHHC---CCCCeeEEeec-hHHHHhCCCCCCcEEEecCCC
Q 032721 67 KRLVDVGGSAGDCLRMILQKH---PFICEGINFDL-PEVVAEAPSIPGVTHIGGDMF 119 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~---p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~ 119 (135)
.+|+=.| |+|.++..++++. ++.+ +++++. +..........+++++.+|+.
T Consensus 25 ~~vlVtG-atG~iG~~l~~~L~~~~g~~-V~~~~r~~~~~~~~~~~~~v~~~~~Dl~ 79 (372)
T 3slg_A 25 KKVLILG-VNGFIGHHLSKRILETTDWE-VFGMDMQTDRLGDLVKHERMHFFEGDIT 79 (372)
T ss_dssp CEEEEES-CSSHHHHHHHHHHHHHSSCE-EEEEESCCTTTGGGGGSTTEEEEECCTT
T ss_pred CEEEEEC-CCChHHHHHHHHHHhCCCCE-EEEEeCChhhhhhhccCCCeEEEeCccC
Confidence 4677555 6887777766643 4567 999997 433333223378999999997
No 328
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=65.69 E-value=22 Score=24.22 Aligned_cols=60 Identities=13% Similarity=0.040 Sum_probs=40.6
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC-------CCCCcEEEe
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-------IPAADAIFM 130 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-------~p~~D~~~l 130 (135)
.+++=+|+ |.++..+++..-....++++|. |+.++.+. ..+.++.||..++ +..+|+++.
T Consensus 10 ~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (234)
T 2aef_A 10 RHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIV 77 (234)
T ss_dssp CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEE
T ss_pred CEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEE
Confidence 56777776 7888888877654321677787 66666554 5688999998643 334687765
No 329
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=65.37 E-value=5 Score=29.74 Aligned_cols=65 Identities=11% Similarity=0.052 Sum_probs=42.9
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-CCcEEEecCCCCC----CC--CCcEEEec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS----IP--AADAIFMK 131 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-~rv~~~~gd~~~~----~p--~~D~~~l~ 131 (135)
-+++|+-||.|.+..++.++.-..+-+...|. +.+++.-+.+ +...+..+|..+- +| ..|+++.+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEec
Confidence 37999999999999999987543231467788 6666655443 4455666777432 33 24777643
No 330
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=64.81 E-value=10 Score=26.77 Aligned_cols=64 Identities=17% Similarity=0.066 Sum_probs=34.8
Q ss_pred ceEEeecCCC--CHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCCCCCCcEEEec
Q 032721 67 KRLVDVGGSA--GDCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMK 131 (135)
Q Consensus 67 ~~vvDvGgG~--G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~~p~~D~~~l~ 131 (135)
.+|.=||+|. +.++..+++..+..+ ++++|. ++.++.+.+.........|.-+.+..+|++++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~-V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVila 73 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYK-IVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILA 73 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSE-EEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEEC
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcE-EEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEc
Confidence 3577788665 234555555544567 999998 665554432211111223432224457888864
No 331
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=64.76 E-value=5.6 Score=29.15 Aligned_cols=39 Identities=23% Similarity=0.239 Sum_probs=32.0
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS 107 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~ 107 (135)
...|+|-=||+|..+.+..+.. .+ ++++|+ |..++.+++
T Consensus 253 ~~~VlDpF~GsGtt~~aa~~~g--r~-~ig~e~~~~~~~~~~~ 292 (323)
T 1boo_A 253 DDLVVDIFGGSNTTGLVAERES--RK-WISFEMKPEYVAASAF 292 (323)
T ss_dssp TCEEEETTCTTCHHHHHHHHTT--CE-EEEEESCHHHHHHHHG
T ss_pred CCEEEECCCCCCHHHHHHHHcC--CC-EEEEeCCHHHHHHHHH
Confidence 4789999999999999988873 45 999999 777776654
No 332
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=62.07 E-value=11 Score=29.23 Aligned_cols=61 Identities=11% Similarity=0.067 Sum_probs=41.0
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCC-eeEEeec-hHHHHhCCCCCCcEEEecCCCCC-------CCCCcEEEe
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFIC-EGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-------IPAADAIFM 130 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~-~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-------~p~~D~~~l 130 (135)
+|+=+ |.|.++..+++.--.-. .++++|. ++.++.+...-.+..+.||-.++ +..||+++.
T Consensus 5 ~iiI~--G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 5 KIIIL--GAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp EEEEE--CCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred EEEEE--CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 34444 45788888888664322 3999999 88887765444678889998665 234687664
No 333
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=60.91 E-value=5.9 Score=26.26 Aligned_cols=30 Identities=10% Similarity=-0.127 Sum_probs=24.5
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
-|+=||+|...++.++.-+.-+++ ++++|.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~-V~v~Ek 33 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQ-VHLFDK 33 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEEC
Confidence 378899999888777766666889 999996
No 334
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=59.80 E-value=6.8 Score=26.18 Aligned_cols=47 Identities=21% Similarity=0.052 Sum_probs=32.0
Q ss_pred EeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC--CCcEEEecC
Q 032721 70 VDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI--PGVTHIGGD 117 (135)
Q Consensus 70 vDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~--~rv~~~~gd 117 (135)
-=+.||||.=..-.+.++|+++ +.+.--+.....++++ .+|-.+.+.
T Consensus 65 GIliCGTGiG~siaANKv~GIR-AAl~~d~~sA~~ar~hNnaNVL~lG~r 113 (162)
T 2vvp_A 65 GIVLGGSGNGEQIAANKVPGAR-CALAWSVQTAALAREHNNAQLIGIGGR 113 (162)
T ss_dssp EEEEESSSHHHHHHHHTSTTCC-EEECCSHHHHHHHHHTTCCSEEEEEGG
T ss_pred EEEEeCCcHHHHHHHhcCCCeE-EEEeCCHHHHHHHHHhCCCcEEEEccc
Confidence 3467899998888999999999 6555446666666553 445444443
No 335
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=58.74 E-value=8.4 Score=28.79 Aligned_cols=45 Identities=20% Similarity=0.157 Sum_probs=33.9
Q ss_pred CCCcceEEeecCCC-CHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC
Q 032721 63 FKGVKRLVDVGGSA-GDCLRMILQKHPFICEGINFDL-PEVVAEAPSI 108 (135)
Q Consensus 63 ~~~~~~vvDvGgG~-G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~ 108 (135)
.....+|+-+|+|. |.++..+++....-+ +++.|. ++.++.+++.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~-Vi~~~~~~~~~~~a~~l 229 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAAC-VIVGDQNPERLKLLSDA 229 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSE-EEEEESCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCE-EEEEcCCHHHHHHHHHc
Confidence 55667899999876 888899998764336 999997 7777776554
No 336
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=58.33 E-value=11 Score=26.34 Aligned_cols=59 Identities=15% Similarity=0.024 Sum_probs=35.5
Q ss_pred EEeecCCCCHHHHHHHHHC---CCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC--C----CCCcEEEe
Q 032721 69 LVDVGGSAGDCLRMILQKH---PFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS--I----PAADAIFM 130 (135)
Q Consensus 69 vvDvGgG~G~~~~~l~~~~---p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~--~----p~~D~~~l 130 (135)
|+=. ||+|.++..++++. +..+ ++++++ +...... ...+++++.+|+.++ + ...|+++.
T Consensus 3 ilVt-GatG~iG~~l~~~L~~~~g~~-V~~~~R~~~~~~~~-~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~ 71 (289)
T 3e48_A 3 IMLT-GATGHLGTHITNQAIANHIDH-FHIGVRNVEKVPDD-WRGKVSVRQLDYFNQESMVEAFKGMDTVVF 71 (289)
T ss_dssp EEEE-TTTSHHHHHHHHHHHHTTCTT-EEEEESSGGGSCGG-GBTTBEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred EEEE-cCCchHHHHHHHHHhhCCCCc-EEEEECCHHHHHHh-hhCCCEEEEcCCCCHHHHHHHHhCCCEEEE
Confidence 4434 46787776666543 3567 888887 4322111 126899999999764 2 23477764
No 337
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=58.00 E-value=8.2 Score=25.64 Aligned_cols=58 Identities=10% Similarity=0.120 Sum_probs=35.2
Q ss_pred EEeecCCCCHHHHHHHHHCC--CCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC----CCCCcEEEe
Q 032721 69 LVDVGGSAGDCLRMILQKHP--FICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS----IPAADAIFM 130 (135)
Q Consensus 69 vvDvGgG~G~~~~~l~~~~p--~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~----~p~~D~~~l 130 (135)
|+=.| |+|.++..++++.- +.+ ++++++ +...+... ++++++.+|+.+. +...|+++.
T Consensus 3 vlVtG-atG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi~ 67 (221)
T 3ew7_A 3 IGIIG-ATGRAGSRILEEAKNRGHE-VTAIVRNAGKITQTH--KDINILQKDIFDLTLSDLSDQNVVVD 67 (221)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCE-EEEEESCSHHHHHHC--SSSEEEECCGGGCCHHHHTTCSEEEE
T ss_pred EEEEc-CCchhHHHHHHHHHhCCCE-EEEEEcCchhhhhcc--CCCeEEeccccChhhhhhcCCCEEEE
Confidence 44344 57766666655432 346 888887 55444333 6789999999654 223477664
No 338
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=57.96 E-value=13 Score=28.17 Aligned_cols=30 Identities=27% Similarity=0.191 Sum_probs=23.8
Q ss_pred eEEeecCCCCHHHH--HHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLR--MILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~--~l~~~~p~l~~~~~~D~ 98 (135)
+|+=||+|.+.+.. .+++..++.+ ++++|.
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~-V~lie~ 33 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESD-IIIFEK 33 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSC-EEEEES
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCc-EEEEeC
Confidence 57889999997554 5677788888 999985
No 339
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=57.38 E-value=7.8 Score=25.51 Aligned_cols=47 Identities=13% Similarity=0.032 Sum_probs=32.3
Q ss_pred eecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC--CCcEEEecCC
Q 032721 71 DVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI--PGVTHIGGDM 118 (135)
Q Consensus 71 DvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~--~rv~~~~gd~ 118 (135)
=+.||||.=....+.++|.++ +.+.--+.....++++ .+|-.+.+.+
T Consensus 62 IliCGTGiG~siaANKv~GIR-AAl~~d~~sA~~ar~hNnaNVl~lG~rv 110 (149)
T 3he8_A 62 IVICGTGLGISIAANKVPGIR-AAVCTNSYMARMSREHNDANILALGERV 110 (149)
T ss_dssp EEEESSSHHHHHHHHTSTTCC-EEECSSHHHHHHHHHTTCCSEEEEETTT
T ss_pred EEEcCCcHHHHHHhhcCCCeE-EEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 367899988888899999999 6555446666666654 4454444443
No 340
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=56.29 E-value=8.8 Score=25.75 Aligned_cols=46 Identities=13% Similarity=-0.036 Sum_probs=31.8
Q ss_pred eecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC--CCcEEEecC
Q 032721 71 DVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI--PGVTHIGGD 117 (135)
Q Consensus 71 DvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~--~rv~~~~gd 117 (135)
=+.||||.=....+.++|.++ +.+.--+.....+++. .+|-.+.+.
T Consensus 83 IliCGTGiG~sIaANKv~GIR-AAlc~d~~sA~laR~hNnANVL~lG~R 130 (166)
T 3s5p_A 83 ILVCGTGIGISIAANKMKGIR-CALCSTEYDAEMARKHNNANALALGGR 130 (166)
T ss_dssp EEEESSSHHHHHHHHTSTTCC-EEECSSHHHHHHHHHTTCCCEEEEETT
T ss_pred EEEcCCcHHHHHHhhcCCCeE-EEEeCCHHHHHHHHHhCCCcEEEEccc
Confidence 367899998888899999999 6555446666666553 445444443
No 341
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=56.20 E-value=7.2 Score=25.87 Aligned_cols=48 Identities=13% Similarity=0.035 Sum_probs=32.9
Q ss_pred EeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC--CCcEEEecCC
Q 032721 70 VDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI--PGVTHIGGDM 118 (135)
Q Consensus 70 vDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~--~rv~~~~gd~ 118 (135)
-=+.||||.=....+.++|.++ +.+.--+.....+++. .+|-.+.+.+
T Consensus 73 GIliCGTGiG~siaANKv~GIR-AAl~~d~~sA~~ar~hNnANVL~lG~rv 122 (155)
T 1o1x_A 73 GILLCGTGLGMSIAANRYRGIR-AALCLFPDMARLARSHNNANILVLPGRL 122 (155)
T ss_dssp EEEEESSSHHHHHHHTTSTTCC-EEECSSHHHHHHHHHTTCCSEEEEETTT
T ss_pred EEEEcCCcHHHHHHhhcCCCeE-EEEeCCHHHHHHHHHcCCCcEEEECCcc
Confidence 3467899998888999999999 6555446666666543 4555555444
No 342
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=55.99 E-value=10 Score=27.33 Aligned_cols=31 Identities=13% Similarity=0.128 Sum_probs=25.3
Q ss_pred ceEEeecCCCCHHHHH--HHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRM--ILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~--l~~~~p~l~~~~~~D~ 98 (135)
.-|+=||+|++.++.+ ++++.++++ ++++|.
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~-V~viEk 98 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLK-VCIIES 98 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSC-EEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 3588899999888776 555788999 999986
No 343
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=55.86 E-value=17 Score=22.08 Aligned_cols=62 Identities=18% Similarity=0.098 Sum_probs=35.5
Q ss_pred ceEEeecCCCCHHHHHHHHHC--CCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC-------CCCCcEEEec
Q 032721 67 KRLVDVGGSAGDCLRMILQKH--PFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-------IPAADAIFMK 131 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~--p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-------~p~~D~~~l~ 131 (135)
.+|+=+|+ |.++..+++.. .+.+ ++++|. ++.++.......+.++.+|..+. +..+|+++..
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~-v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 76 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHD-IVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAV 76 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCe-EEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence 35666765 55555544432 2356 899998 66555443222566677776432 2346887754
No 344
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=53.78 E-value=10 Score=29.53 Aligned_cols=38 Identities=16% Similarity=0.255 Sum_probs=26.9
Q ss_pred HHHhccCCCCCCcceEEeecCCCCH-----HHHHHHHHCCCCC
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGD-----CLRMILQKHPFIC 91 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~-----~~~~l~~~~p~l~ 91 (135)
...++..|.+..+..+-.+|||||. ++..|...||+..
T Consensus 123 Rk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~ey~kk~ 165 (451)
T 3ryc_A 123 RKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165 (451)
T ss_dssp HHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHhcCcce
Confidence 4455556656677888999999983 4555777898744
No 345
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=53.78 E-value=13 Score=27.31 Aligned_cols=43 Identities=16% Similarity=0.067 Sum_probs=31.3
Q ss_pred CCCcceEEeecCCC-CHHHHHHHHHCCCCCeeEEeec-hHHHHhCC
Q 032721 63 FKGVKRLVDVGGSA-GDCLRMILQKHPFICEGINFDL-PEVVAEAP 106 (135)
Q Consensus 63 ~~~~~~vvDvGgG~-G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~ 106 (135)
.....+|+-+|+|. |.++..+++....-+ +++.|. ++-++.++
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~-Vi~~~~~~~~~~~a~ 232 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASI-IIAVDIVESRLELAK 232 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSE-EEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCe-EEEECCCHHHHHHHH
Confidence 55567899999876 788888888764335 888886 66666554
No 346
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=53.31 E-value=8.5 Score=25.90 Aligned_cols=47 Identities=13% Similarity=0.032 Sum_probs=32.4
Q ss_pred eecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC--CCcEEEecCC
Q 032721 71 DVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI--PGVTHIGGDM 118 (135)
Q Consensus 71 DvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~--~rv~~~~gd~ 118 (135)
=+.||||.=....+.++|.++ +.+.--+.....+++. .+|-.+.+.+
T Consensus 82 IliCGTGiG~sIaANKv~GIR-AAlc~d~~sA~~aR~hNnANVL~lG~Rv 130 (169)
T 3ph3_A 82 IVICGTGLGISIAANKVPGIR-AAVCTNSYMARMSREHNDANILALGERV 130 (169)
T ss_dssp EEEESSSHHHHHHHTTSTTCC-EEECSSHHHHHHHHHTTCCSEEEEETTT
T ss_pred EEEcCCcHHHHHHhhcCCCeE-EEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 367899998888999999999 6555446666666653 4554444443
No 347
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=52.61 E-value=26 Score=25.07 Aligned_cols=62 Identities=19% Similarity=0.049 Sum_probs=37.2
Q ss_pred ceEEeecCCCCHHHHHHHHHCC--CCCeeEEeech-H----HHHhCCCCCCcEEEecCCCCC-CCCCcEEEe
Q 032721 67 KRLVDVGGSAGDCLRMILQKHP--FICEGINFDLP-E----VVAEAPSIPGVTHIGGDMFKS-IPAADAIFM 130 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p--~l~~~~~~D~p-~----~~~~a~~~~rv~~~~gd~~~~-~p~~D~~~l 130 (135)
.+|+=.| |+|.++..++++.- +.+ +++++.. . .+.......+++++.+|+.+. +...|+++-
T Consensus 28 ~~vlVtG-atG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vih 97 (343)
T 2b69_A 28 KRILITG-GAGFVGSHLTDKLMMDGHE-VTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYH 97 (343)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCE-EEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEE
T ss_pred CEEEEEc-CccHHHHHHHHHHHHCCCE-EEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEEE
Confidence 5666555 68887777665432 345 8888762 1 111111235789999999776 344587764
No 348
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=52.47 E-value=7.2 Score=27.27 Aligned_cols=46 Identities=17% Similarity=0.009 Sum_probs=31.6
Q ss_pred EeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC--CCcEEEec
Q 032721 70 VDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI--PGVTHIGG 116 (135)
Q Consensus 70 vDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~--~rv~~~~g 116 (135)
-=+.||||.=....+.++|+++ +.+.--|.....++++ .+|-.+.+
T Consensus 70 GIliCGTGiG~siaANKv~GIR-AAlc~d~~sA~laR~hNnANVL~lG~ 117 (214)
T 3ono_A 70 VVTGCGTGQGALMSCNLHPGVV-CGYCLEPSDAFLFNQINNGNAISLAF 117 (214)
T ss_dssp EEEEESSSHHHHHHHHTSTTCC-EEECSSHHHHHHHHHHTCCSEEEEES
T ss_pred EEEEcCCcHHHHHHHhcCCCeE-EEEeCCHHHHHHHHHHcCCcEEEecC
Confidence 3477899998888999999999 6555446666666543 34444443
No 349
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=51.59 E-value=6.6 Score=27.52 Aligned_cols=47 Identities=17% Similarity=-0.009 Sum_probs=31.9
Q ss_pred EEeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC--CCcEEEec
Q 032721 69 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI--PGVTHIGG 116 (135)
Q Consensus 69 vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~--~rv~~~~g 116 (135)
..=+.||||.=....+.++|+++ +-+.--|.....++++ .+|-.+.+
T Consensus 70 ~GIliCGTGiG~sIAANKv~GIR-AAlc~d~~sA~laR~HNnANVL~lG~ 118 (216)
T 2ppw_A 70 FVVTGCGTGVGAMLALNSFPGVV-CGLAVDPTDAYLYSQINGGNALSIPY 118 (216)
T ss_dssp EEEEEESSSHHHHHHHTTSTTCC-EEECSSHHHHHHHHHHTCCSEEEEES
T ss_pred eEEEEcCCcHHHHHHhhcCCCeE-EEEeCCHHHHHHHHHhcCceEEEeCC
Confidence 34477899998889999999999 6555446666666543 34444443
No 350
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=51.53 E-value=8.9 Score=28.02 Aligned_cols=30 Identities=10% Similarity=-0.044 Sum_probs=23.9
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
+|+=||+|...++.++.-+.-+++ ++++|.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~-v~v~Er 32 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIK-VTIYER 32 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCC-EEEEec
Confidence 588899999887777766666788 888875
No 351
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=51.29 E-value=12 Score=27.55 Aligned_cols=30 Identities=10% Similarity=0.152 Sum_probs=23.1
Q ss_pred eEEeecCCCCHHHH--HHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLR--MILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~--~l~~~~p~l~~~~~~D~ 98 (135)
.|+=||||.+.++. .++++.|+++ ++++|.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~-V~v~E~ 33 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWA-IDIVEK 33 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSE-EEEECS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCC-EEEEEC
Confidence 47789999886555 4556667899 999997
No 352
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=51.25 E-value=22 Score=26.02 Aligned_cols=39 Identities=21% Similarity=0.175 Sum_probs=31.5
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-h---HHHHhCC
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-P---EVVAEAP 106 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p---~~~~~a~ 106 (135)
....|+|-=||+|..+.+..+.. .+ ++++|+ | ..++.+.
T Consensus 242 ~~~~vlDpF~GsGtt~~aa~~~~--r~-~ig~e~~~~~~~~~~~~~ 284 (319)
T 1eg2_A 242 PGSTVLDFFAGSGVTARVAIQEG--RN-SICTDAAPVFKEYYQKQL 284 (319)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHT--CE-EEEEESSTHHHHHHHHHH
T ss_pred CCCEEEecCCCCCHHHHHHHHcC--Cc-EEEEECCccHHHHHHHHH
Confidence 34789999999999999998884 45 999999 6 6666554
No 353
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=51.10 E-value=6.2 Score=25.99 Aligned_cols=47 Identities=13% Similarity=0.010 Sum_probs=32.1
Q ss_pred EeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC--CCcEEEecC
Q 032721 70 VDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI--PGVTHIGGD 117 (135)
Q Consensus 70 vDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~--~rv~~~~gd 117 (135)
-=+.||||.=..-.+.++|.++ +.+.--|.....++++ .+|-.+.+.
T Consensus 62 GIliCGTGiG~siaANKv~GIR-Aal~~d~~sA~~ar~hNnaNVl~lG~r 110 (149)
T 2vvr_A 62 GILICGTGVGISIAANKFAGIR-AVVCSEPYSAQLSRQNNDTNVLAFGSR 110 (149)
T ss_dssp EEEEESSSHHHHHHHHTSTTCC-EEECSSHHHHHHHHHHHCCCEEEEETT
T ss_pred EEEEeCCcHHHHHHHhcCCCeE-EEEeCCHHHHHHHHHhCCCcEEEECcc
Confidence 3467899998888999999999 6555446666666553 444444443
No 354
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=50.82 E-value=12 Score=25.47 Aligned_cols=47 Identities=11% Similarity=0.046 Sum_probs=32.1
Q ss_pred eecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC--CCcEEEecCC
Q 032721 71 DVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI--PGVTHIGGDM 118 (135)
Q Consensus 71 DvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~--~rv~~~~gd~ 118 (135)
=+.||||.=....+.++|.++ +.+.--+.....+++. .+|-.+.+.+
T Consensus 86 IliCGTGiG~sIaANKv~GIR-AAlc~d~~sA~laR~HNnANVL~lG~Rv 134 (179)
T 3k7p_A 86 VLAAGSGIGMSIAANKVPGVR-AALCHDHYTAAMSRIHNDANIVCVGERT 134 (179)
T ss_dssp EEEESSSHHHHHHHHTSTTCC-EEECCSHHHHHHHHHTTCCSEEEEETTT
T ss_pred EEEccCcHHHhhHhhcCCCeE-EEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 367899988888899999999 6555446666666553 4454444443
No 355
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=50.57 E-value=8.2 Score=27.29 Aligned_cols=47 Identities=13% Similarity=-0.082 Sum_probs=31.8
Q ss_pred EEeecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC--CCcEEEec
Q 032721 69 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI--PGVTHIGG 116 (135)
Q Consensus 69 vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~--~rv~~~~g 116 (135)
..=+.||||.=....+.++|+++ +.+.--|.....++++ .+|-.+.+
T Consensus 86 ~GIliCGTGiG~sIAANKv~GIR-AAlc~d~~sA~laR~HNnANVL~lGa 134 (231)
T 3c5y_A 86 FVVTGCGTGMGSMLAANAMPGVF-CGLVIDPTDAFLFGQINDGNAISMPY 134 (231)
T ss_dssp EEEEEESSSHHHHHHHHTSTTCC-EEECCSHHHHHHHHHHTCCSEEEEES
T ss_pred eEEEEcCCcHHHHHHHhcCCCeE-EEEeCCHHHHHHHHHhcCccEEEECC
Confidence 34477899998888999999999 6555446666666543 34444443
No 356
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=50.16 E-value=22 Score=25.64 Aligned_cols=61 Identities=18% Similarity=0.073 Sum_probs=40.7
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC----CCCCcEEEe
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS----IPAADAIFM 130 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~----~p~~D~~~l 130 (135)
+|+|+=||.|.+...+.++ +.+-+...|. +.+++.-+.+-.-.++.+|..+- +|..|+++.
T Consensus 2 kvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~g 67 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIG 67 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEEC
T ss_pred eEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEe
Confidence 5899999999999999886 3451346777 66665544432335667787432 566688764
No 357
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=50.07 E-value=12 Score=26.50 Aligned_cols=31 Identities=6% Similarity=-0.032 Sum_probs=25.2
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||||.+.++.+..-+..+.+ ++++|.
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~-v~lie~ 38 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQAS-VKIIES 38 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCC-EEEEEc
Confidence 4688899999988777665556788 999997
No 358
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=50.07 E-value=11 Score=29.39 Aligned_cols=32 Identities=6% Similarity=-0.150 Sum_probs=24.6
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..+||=||||.|.+..+..-+..+.+ +|++|.
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~-VtLId~ 73 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYN-VSIISP 73 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCE-EEEEES
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCc-EEEECC
Confidence 36899999999987766555555677 999995
No 359
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=49.95 E-value=20 Score=25.25 Aligned_cols=52 Identities=17% Similarity=0.131 Sum_probs=29.5
Q ss_pred ceEEeecCCCC---HHHHHHHHHCCCCCeeEEeec-hHHHHhCCC--CCCcEEEecCCCCC
Q 032721 67 KRLVDVGGSAG---DCLRMILQKHPFICEGINFDL-PEVVAEAPS--IPGVTHIGGDMFKS 121 (135)
Q Consensus 67 ~~vvDvGgG~G---~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~--~~rv~~~~gd~~~~ 121 (135)
++++=.||+.| .++..++++ +.+ +++.|. ++.++...+ ..++.++.+|+-+.
T Consensus 30 k~vlVTGas~gIG~aia~~la~~--G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~ 87 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADE--GCH-VLCADIDGDAADAAATKIGCGAAACRVDVSDE 87 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHT--TCE-EEEEESSHHHHHHHHHHHCSSCEEEECCTTCH
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCE-EEEEeCCHHHHHHHHHHcCCcceEEEecCCCH
Confidence 56666666544 244444444 456 888887 443333211 25678888888543
No 360
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=49.82 E-value=15 Score=28.25 Aligned_cols=39 Identities=23% Similarity=0.341 Sum_probs=25.7
Q ss_pred HHHHhccCCCCCCcceEEeecCCCC-----HHHHHHHHHCCCCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAG-----DCLRMILQKHPFIC 91 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G-----~~~~~l~~~~p~l~ 91 (135)
+...++..|.+..+..+..+||||| .++..+...||+..
T Consensus 121 Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~y~~~~ 164 (426)
T 2btq_B 121 IDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAYPKKR 164 (426)
T ss_dssp HHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTTCTTSE
T ss_pred HHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHHcCcCc
Confidence 3445555554555778899999997 25556666787643
No 361
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=49.32 E-value=16 Score=27.65 Aligned_cols=31 Identities=10% Similarity=0.021 Sum_probs=26.1
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||||.+.+..+...+..+.+ ++++|.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~-V~liE~ 35 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAMYGQK-CALIEA 35 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC-EEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCe-EEEEcC
Confidence 4688899999988887777777888 999995
No 362
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=48.91 E-value=13 Score=28.88 Aligned_cols=39 Identities=18% Similarity=0.296 Sum_probs=27.2
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCH-----HHHHHHHHCCCCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGD-----CLRMILQKHPFIC 91 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~-----~~~~l~~~~p~l~ 91 (135)
+...++..+.+..+..+-.+|||||. ++..|...||+..
T Consensus 120 IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~ey~kk~ 163 (445)
T 3ryc_B 120 VRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRI 163 (445)
T ss_dssp HHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHHcCccc
Confidence 34455556655667788999999984 4555778899744
No 363
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=48.49 E-value=13 Score=26.34 Aligned_cols=29 Identities=3% Similarity=0.108 Sum_probs=22.6
Q ss_pred EEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 69 LVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 69 vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
|+=||+|++.+..++..+.-+++ ++++|.
T Consensus 9 vvIIG~GpAGl~aA~~l~~~g~~-V~liE~ 37 (312)
T 4gcm_A 9 IAIIGAGPAGMTAAVYASRANLK-TVMIER 37 (312)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred EEEECCCHHHHHHHHHHHHCCCC-EEEEec
Confidence 77799999988776655555778 999985
No 364
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=48.09 E-value=12 Score=24.63 Aligned_cols=42 Identities=7% Similarity=-0.163 Sum_probs=28.1
Q ss_pred CCCcceEEeecC--CCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCC
Q 032721 63 FKGVKRLVDVGG--SAGDCLRMILQKHPFICEGINFDL-PEVVAEAP 106 (135)
Q Consensus 63 ~~~~~~vvDvGg--G~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~ 106 (135)
....++|+.+|+ |.|..+..+++... .+ +++.|. ++..+.++
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~-V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIG-AR-IYTTAGSDAKREMLS 80 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHT-CE-EEEEESSHHHHHHHH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcC-CE-EEEEeCCHHHHHHHH
Confidence 555678999984 55666666666543 56 888887 55555443
No 365
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=48.03 E-value=15 Score=28.37 Aligned_cols=32 Identities=13% Similarity=0.086 Sum_probs=26.7
Q ss_pred cceEEeecCCCCHHHHH--HHHHCCCCCeeEEeec
Q 032721 66 VKRLVDVGGSAGDCLRM--ILQKHPFICEGINFDL 98 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~--l~~~~p~l~~~~~~D~ 98 (135)
...|+=||+|.+.+..+ |.++.++.+ ++++|.
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~-V~lie~ 44 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGAR-VLIVSE 44 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCE-EEEEES
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCe-EEEEeC
Confidence 35789999999987776 777778888 999986
No 366
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=47.47 E-value=14 Score=27.84 Aligned_cols=31 Identities=13% Similarity=-0.038 Sum_probs=23.6
Q ss_pred ceEEeecCCCCHHHHHHHHHC---CCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKH---PFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~---p~l~~~~~~D~ 98 (135)
.+|+=||||.+.+..+..-+. ++.+ ++++|.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~-Vtlie~ 38 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHE-VTLISA 38 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSE-EEEECS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCE-EEEEeC
Confidence 579999999987666544443 6788 999985
No 367
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=47.35 E-value=14 Score=25.17 Aligned_cols=46 Identities=17% Similarity=-0.005 Sum_probs=31.2
Q ss_pred eecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC--CCcEEEecC
Q 032721 71 DVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI--PGVTHIGGD 117 (135)
Q Consensus 71 DvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~--~rv~~~~gd 117 (135)
=+-||||.=..-.+.++|.++ +.+.--+.....+++. .+|-.+.+.
T Consensus 94 IliCGTGiG~sIaANKv~GIR-AAlc~d~~sA~laR~HNnANVL~lG~R 141 (184)
T 3sgw_A 94 LMICGTGLGVAISANKVPGIR-AVTAHDTFSVERAILSNDAQVLCFGQR 141 (184)
T ss_dssp EEEESSSHHHHHHHHTSTTCC-EEECCSHHHHHHHHHTTCCSEEEEETT
T ss_pred EEEcCCcHHHhhhhhcCCCeE-EEEeCCHHHHHHHHHhCCCcEEEEchh
Confidence 366899988888899999999 6555446666666553 344444443
No 368
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=47.16 E-value=18 Score=24.14 Aligned_cols=62 Identities=15% Similarity=0.173 Sum_probs=37.3
Q ss_pred ceEEeecCCCCHHHHHHHHHC---CCCCeeEEeec-hH-HHHhCC-CCCCcEEEecCCCCC--C----CCCcEEEe
Q 032721 67 KRLVDVGGSAGDCLRMILQKH---PFICEGINFDL-PE-VVAEAP-SIPGVTHIGGDMFKS--I----PAADAIFM 130 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~---p~l~~~~~~D~-p~-~~~~a~-~~~rv~~~~gd~~~~--~----p~~D~~~l 130 (135)
++++=.| |+|.++.+++++. .+.+ ++++++ ++ .++... ...++.++.+|+.+. + ...|+++.
T Consensus 6 k~vlVtG-asg~iG~~~~~~l~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~ 79 (221)
T 3r6d_A 6 XYITILG-AAGQIAQXLTATLLTYTDMH-ITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFV 79 (221)
T ss_dssp SEEEEES-TTSHHHHHHHHHHHHHCCCE-EEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred EEEEEEe-CCcHHHHHHHHHHHhcCCce-EEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 3466555 5666666665542 3556 888888 44 333221 346899999999754 2 22477764
No 369
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=46.97 E-value=18 Score=26.70 Aligned_cols=32 Identities=6% Similarity=-0.018 Sum_probs=26.2
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeech
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDLP 99 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p 99 (135)
..|+=||||...++.++.-+..+++ ++++|..
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~-V~v~E~~ 37 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFK-VKIVEKQ 37 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC-EEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCC-EEEEeCC
Confidence 3688899999988887777777888 9999963
No 370
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=46.84 E-value=24 Score=27.64 Aligned_cols=61 Identities=13% Similarity=0.064 Sum_probs=41.4
Q ss_pred ceEEeecCCCCHHHHHHHHHCC--CCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC-------CCCCcEEEe
Q 032721 67 KRLVDVGGSAGDCLRMILQKHP--FICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-------IPAADAIFM 130 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p--~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-------~p~~D~~~l 130 (135)
.+++=+|+ |.++..+++.-- +.. ++++|. ++.++.++....+.++.||..++ +..||.++.
T Consensus 128 ~hviI~G~--g~~g~~la~~L~~~~~~-vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~ 198 (565)
T 4gx0_A 128 GHILIFGI--DPITRTLIRKLESRNHL-FVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA 198 (565)
T ss_dssp SCEEEESC--CHHHHHHHHHTTTTTCC-EEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE
T ss_pred CeEEEECC--ChHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE
Confidence 56766665 567777777554 345 999998 77777665433788999999764 123676664
No 371
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=46.56 E-value=19 Score=28.10 Aligned_cols=39 Identities=21% Similarity=0.327 Sum_probs=26.4
Q ss_pred HHHHhccCCCCCCcceEEeecCCCCH-----HHHHHHHHCCCCC
Q 032721 53 MTSVLDGYDGFKGVKRLVDVGGSAGD-----CLRMILQKHPFIC 91 (135)
Q Consensus 53 ~~~~~~~~~~~~~~~~vvDvGgG~G~-----~~~~l~~~~p~l~ 91 (135)
+...++..|.+..+..+..+|||||. ++..+...||+..
T Consensus 122 Ir~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~dey~~k~ 165 (475)
T 3cb2_A 122 IDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKL 165 (475)
T ss_dssp HHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHHHHSTTSE
T ss_pred HHHHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHHHHcCCCc
Confidence 34455556656667889999999973 4555666788644
No 372
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=46.23 E-value=14 Score=24.63 Aligned_cols=60 Identities=18% Similarity=0.139 Sum_probs=36.7
Q ss_pred ceEEeecCCCCHHHHHHHHHCC--CCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC--C----CCCcEEEe
Q 032721 67 KRLVDVGGSAGDCLRMILQKHP--FICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS--I----PAADAIFM 130 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p--~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~--~----p~~D~~~l 130 (135)
.+|+=.| |+|.++..++++.- +.+ ++++++ +.-.+.. ..+++++.+|+.+. + ...|+++.
T Consensus 5 ~~ilItG-atG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 73 (227)
T 3dhn_A 5 KKIVLIG-ASGFVGSALLNEALNRGFE-VTAVVRHPEKIKIE--NEHLKVKKADVSSLDEVCEVCKGADAVIS 73 (227)
T ss_dssp CEEEEET-CCHHHHHHHHHHHHTTTCE-EEEECSCGGGCCCC--CTTEEEECCCTTCHHHHHHHHTTCSEEEE
T ss_pred CEEEEEc-CCchHHHHHHHHHHHCCCE-EEEEEcCcccchhc--cCceEEEEecCCCHHHHHHHhcCCCEEEE
Confidence 4566454 67877777666442 345 888888 4322211 27899999999754 2 22477664
No 373
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=45.99 E-value=16 Score=25.61 Aligned_cols=31 Identities=6% Similarity=-0.026 Sum_probs=24.6
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||+|.+.++.++.-+..+.+ ++++|.
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~-v~lie~ 46 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLK-TLVIGE 46 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred cCEEEECccHHHHHHHHHHHHCCCc-EEEEec
Confidence 5789999999987776665555778 999986
No 374
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=45.88 E-value=15 Score=26.01 Aligned_cols=29 Identities=10% Similarity=-0.041 Sum_probs=22.0
Q ss_pred EEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 69 LVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 69 vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
|+=||+|.+.++.++..+.-+++ ++++|.
T Consensus 9 VvIIGaGpAGlsAA~~lar~g~~-v~lie~ 37 (304)
T 4fk1_A 9 CAVIGAGPAGLNASLVLGRARKQ-IALFDN 37 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred EEEECCCHHHHHHHHHHHHCCCC-EEEEeC
Confidence 77799999988777654445677 888884
No 375
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=45.82 E-value=15 Score=26.63 Aligned_cols=31 Identities=13% Similarity=0.081 Sum_probs=24.5
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||+|.+.++.++..+..+++ ++++|.
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g~~-v~lie~ 45 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNNIS-CRIIES 45 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCC-EEEEec
Confidence 4688899999987777665556778 999985
No 376
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=45.52 E-value=14 Score=26.17 Aligned_cols=32 Identities=13% Similarity=0.102 Sum_probs=25.2
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
...|+=||||.+.++.++.-+..+.+ ++++|.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~-v~vie~ 53 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIK-PILYEG 53 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC-CEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC-EEEEec
Confidence 46899999999877766655555788 999987
No 377
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=45.36 E-value=16 Score=25.95 Aligned_cols=31 Identities=10% Similarity=-0.084 Sum_probs=23.7
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||+|.+.++.+...+..+.+ ++++|.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~-v~lie~ 36 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLS-FRFVDP 36 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCC-EEEEeC
Confidence 4688899999887776655545778 999985
No 378
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=45.28 E-value=19 Score=27.80 Aligned_cols=32 Identities=13% Similarity=0.056 Sum_probs=26.8
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeech
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDLP 99 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p 99 (135)
..|+=||||.+.++.++.-+..+++ ++++|..
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~-V~liE~~ 39 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHR-VLLLERE 39 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC-EEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCC-EEEEccC
Confidence 4688899999988888877777888 9999963
No 379
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=44.92 E-value=21 Score=26.54 Aligned_cols=44 Identities=18% Similarity=0.042 Sum_probs=31.9
Q ss_pred CCCcceEEeecCCC-CHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC
Q 032721 63 FKGVKRLVDVGGSA-GDCLRMILQKHPFICEGINFDL-PEVVAEAPS 107 (135)
Q Consensus 63 ~~~~~~vvDvGgG~-G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~ 107 (135)
.....+|+-+|+|. |.++..+++....-+ +++.|. ++-++.+++
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~-Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAV-VIVGDLNPARLAHAKA 228 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSE-EEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCe-EEEEcCCHHHHHHHHH
Confidence 55557888888655 888999999875435 888887 666666654
No 380
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=44.83 E-value=15 Score=24.51 Aligned_cols=59 Identities=14% Similarity=0.095 Sum_probs=35.3
Q ss_pred EEeecCCCCHHHHHHHHHCC--CCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC----CCCCcEEEe
Q 032721 69 LVDVGGSAGDCLRMILQKHP--FICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS----IPAADAIFM 130 (135)
Q Consensus 69 vvDvGgG~G~~~~~l~~~~p--~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~----~p~~D~~~l 130 (135)
|+=.| |+|.++..++++.- +.+ ++++++ +...... ..++++++.+|+.+. +...|+++.
T Consensus 3 ilVtG-atG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~d~vi~ 68 (224)
T 3h2s_A 3 IAVLG-ATGRAGSAIVAEARRRGHE-VLAVVRDPQKAADR-LGATVATLVKEPLVLTEADLDSVDAVVD 68 (224)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHH-TCTTSEEEECCGGGCCHHHHTTCSEEEE
T ss_pred EEEEc-CCCHHHHHHHHHHHHCCCE-EEEEEecccccccc-cCCCceEEecccccccHhhcccCCEEEE
Confidence 44344 67776666665432 345 888887 4444432 225789999999654 223476654
No 381
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=44.83 E-value=18 Score=28.27 Aligned_cols=38 Identities=24% Similarity=0.326 Sum_probs=26.3
Q ss_pred HHHhccCCCCCCcceEEeecCCCCH-----HHHHHHHHCCCCC
Q 032721 54 TSVLDGYDGFKGVKRLVDVGGSAGD-----CLRMILQKHPFIC 91 (135)
Q Consensus 54 ~~~~~~~~~~~~~~~vvDvGgG~G~-----~~~~l~~~~p~l~ 91 (135)
...++..|.+..+..+..+|||||. ++..+...||+..
T Consensus 125 r~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~l~e~y~~~~ 167 (473)
T 2bto_A 125 DYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIP 167 (473)
T ss_dssp HHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHHHHHHcCCCc
Confidence 3455555545567788999999973 5667777888654
No 382
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=44.80 E-value=17 Score=25.12 Aligned_cols=31 Identities=13% Similarity=0.010 Sum_probs=23.4
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||+|.+.+..+..-+....+ ++++|.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~-v~lie~ 33 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKN-ILLVDA 33 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCC-EEEEeC
Confidence 3688899999887766555555678 999994
No 383
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=44.75 E-value=47 Score=20.76 Aligned_cols=62 Identities=15% Similarity=0.027 Sum_probs=35.8
Q ss_pred ceEEeecCCCCHHHHHHHHHC--CCCCeeEEeec-h-HHHHhCCC--CCCcEEEecCCCCC-------CCCCcEEEec
Q 032721 67 KRLVDVGGSAGDCLRMILQKH--PFICEGINFDL-P-EVVAEAPS--IPGVTHIGGDMFKS-------IPAADAIFMK 131 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~--p~l~~~~~~D~-p-~~~~~a~~--~~rv~~~~gd~~~~-------~p~~D~~~l~ 131 (135)
.+++=+|+ |.++..+++.. -+.+ ++++|. + +.++.... ...+.++.||..++ +..+|+++..
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~-V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQN-VTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCC-EEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCC-EEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence 35666664 66666555433 2456 899997 4 32222211 24588899998643 2346877653
No 384
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=44.39 E-value=31 Score=24.90 Aligned_cols=43 Identities=12% Similarity=-0.002 Sum_probs=32.1
Q ss_pred CCCcceEEeecCCC-CHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC
Q 032721 63 FKGVKRLVDVGGSA-GDCLRMILQKHPFICEGINFDL-PEVVAEAPS 107 (135)
Q Consensus 63 ~~~~~~vvDvGgG~-G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~ 107 (135)
.....+|+-+|+|. |.++..+++... .+ +++.|. ++-.+.+++
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~-Vi~~~~~~~~~~~~~~ 208 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMG-LR-VAAVDIDDAKLNLARR 208 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTT-CE-EEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC-Ce-EEEEeCCHHHHHHHHH
Confidence 55556777788754 899999999875 47 999997 766666554
No 385
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=44.21 E-value=16 Score=27.94 Aligned_cols=31 Identities=10% Similarity=0.023 Sum_probs=24.9
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||||.+.+..+...+..+.+ ++++|.
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~~g~~-V~liE~ 42 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAASYGAK-TLLVEA 42 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSCC-EEEEES
T ss_pred CCEEEEcCCHHHHHHHHHHHHCCCc-EEEEeC
Confidence 4688899999987776666556888 999995
No 386
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=43.92 E-value=8.1 Score=25.42 Aligned_cols=46 Identities=11% Similarity=0.026 Sum_probs=31.6
Q ss_pred eecCCCCHHHHHHHHHCCCCCeeEEeechHHHHhCCCC--CCcEEEecC
Q 032721 71 DVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSI--PGVTHIGGD 117 (135)
Q Consensus 71 DvGgG~G~~~~~l~~~~p~l~~~~~~D~p~~~~~a~~~--~rv~~~~gd 117 (135)
=+.||||.=..-.+.++|.++ +.+.--+.....++++ .+|-.+.+.
T Consensus 68 IliCGTGiG~siaANKv~GIR-AAl~~d~~sA~~ar~hNnANVL~lG~r 115 (148)
T 4em8_A 68 VLICGTGIGMSIAANRHKNIR-AALCSSTMLAKLSREHNDANVLCFGSR 115 (148)
T ss_dssp EEEESSSHHHHHHHTTSTTCC-EEECSSHHHHHHHHHHHCCCEEEEETT
T ss_pred EEEccCcHHHHHHHhcCCCeE-EEEeCCHHHHHHHHHhCCCcEEEEchh
Confidence 367899998888999999999 6555446666666553 444444443
No 387
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=43.86 E-value=20 Score=26.49 Aligned_cols=31 Identities=16% Similarity=0.069 Sum_probs=26.6
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||||.+.++.++.-+..+++ ++++|.
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~G~~-v~v~E~ 57 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQNGID-VSVYER 57 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCE-EEEEEC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCC-EEEEeC
Confidence 4688899999988888877777888 999997
No 388
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=43.57 E-value=14 Score=28.99 Aligned_cols=20 Identities=35% Similarity=0.498 Sum_probs=13.3
Q ss_pred HhccCCCCCCcceEEeecCCC
Q 032721 56 VLDGYDGFKGVKRLVDVGGSA 76 (135)
Q Consensus 56 ~~~~~~~~~~~~~vvDvGgG~ 76 (135)
+...++ ..+...|+|||||+
T Consensus 129 v~~~~~-~~~~~lviDIGGGS 148 (513)
T 1u6z_A 129 VEHTQP-EKGRKLVIDIGGGS 148 (513)
T ss_dssp HHHHSC-CCSCEEEEEECSSC
T ss_pred HHhhcc-CCCCEEEEEECCCc
Confidence 334444 33347899999998
No 389
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=43.53 E-value=17 Score=27.70 Aligned_cols=31 Identities=13% Similarity=-0.026 Sum_probs=25.1
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||||.+.+..+...+..+.+ ++++|.
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~~g~~-V~liE~ 35 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAAFGKR-VALIES 35 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCc-EEEEcC
Confidence 3588899999988777666657888 999995
No 390
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=43.29 E-value=15 Score=28.65 Aligned_cols=32 Identities=9% Similarity=0.082 Sum_probs=23.7
Q ss_pred cceEEeecCCCCHHHHHHHHHC---CCCCeeEEeec
Q 032721 66 VKRLVDVGGSAGDCLRMILQKH---PFICEGINFDL 98 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~---p~l~~~~~~D~ 98 (135)
...|+=||||...++.++.-+. ++++ ++++|.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~-V~liE~ 59 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTAD-ITLLQA 59 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSE-EEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCc-EEEEeC
Confidence 3578889999987655544444 7888 999986
No 391
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=43.25 E-value=32 Score=24.64 Aligned_cols=62 Identities=21% Similarity=0.193 Sum_probs=36.2
Q ss_pred ceEEeecCCCCHHHHHHHHHCC--CCCeeEEeec-h----HHHHhCCCC------CCcEEEecCCCCC------CCCCcE
Q 032721 67 KRLVDVGGSAGDCLRMILQKHP--FICEGINFDL-P----EVVAEAPSI------PGVTHIGGDMFKS------IPAADA 127 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p--~l~~~~~~D~-p----~~~~~a~~~------~rv~~~~gd~~~~------~p~~D~ 127 (135)
.+|+=.| |+|.++..++++.- +.+ +++++. + ..+...... ++++++.+|+.+. +...|+
T Consensus 26 ~~vlVtG-atG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 103 (351)
T 3ruf_A 26 KTWLITG-VAGFIGSNLLEKLLKLNQV-VIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH 103 (351)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCE-EEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CeEEEEC-CCcHHHHHHHHHHHHCCCE-EEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence 4676555 68877776665432 345 888886 2 122221111 6899999999654 123477
Q ss_pred EEe
Q 032721 128 IFM 130 (135)
Q Consensus 128 ~~l 130 (135)
++-
T Consensus 104 Vih 106 (351)
T 3ruf_A 104 VLH 106 (351)
T ss_dssp EEE
T ss_pred EEE
Confidence 663
No 392
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=43.24 E-value=11 Score=27.91 Aligned_cols=31 Identities=13% Similarity=0.056 Sum_probs=23.1
Q ss_pred ceEEeecCCCCHHHHHHHHHC---CCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKH---PFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~---p~l~~~~~~D~ 98 (135)
.+|+=||||.+.++.+..-+. ++.+ ++++|.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~-V~vie~ 35 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKAD-VKVINK 35 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSE-EEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCe-EEEEeC
Confidence 468889999987665544443 7788 999986
No 393
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=43.10 E-value=23 Score=26.90 Aligned_cols=32 Identities=19% Similarity=0.049 Sum_probs=25.3
Q ss_pred ceEEeecCCCCHHHH--HHHHHCCCCCeeEEeech
Q 032721 67 KRLVDVGGSAGDCLR--MILQKHPFICEGINFDLP 99 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~--~l~~~~p~l~~~~~~D~p 99 (135)
.+|+=||+|.+.++. .|+++.|+.+ ++++|..
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~-Vtvie~~ 37 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAH-VTMIDQA 37 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSE-EEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCC-EEEEECC
Confidence 478889999986554 5677778888 9999973
No 394
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=43.08 E-value=16 Score=27.15 Aligned_cols=25 Identities=20% Similarity=0.340 Sum_probs=17.9
Q ss_pred ceEEeecCCCCH--HHHHHHHHCCCCC
Q 032721 67 KRLVDVGGSAGD--CLRMILQKHPFIC 91 (135)
Q Consensus 67 ~~vvDvGgG~G~--~~~~l~~~~p~l~ 91 (135)
.+||=+|||+|. ++..|.+...++.
T Consensus 5 ~~IV~igGGtGl~~ll~gLk~~~~~iT 31 (326)
T 2q7x_A 5 PXITVIGGGTGSPVILXSLREXDVEIA 31 (326)
T ss_dssp CEEEEECCCTTHHHHHHHHHHSSCEEE
T ss_pred CeEEEEcCcccHHHHHHHhccCCCCeE
Confidence 579999999994 6667666544444
No 395
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=42.85 E-value=15 Score=28.61 Aligned_cols=31 Identities=16% Similarity=0.090 Sum_probs=23.4
Q ss_pred ceEEeecCCCCHHHHHHHHHC---CCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKH---PFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~---p~l~~~~~~D~ 98 (135)
..|+=||||...++.++.-+. ++++ ++++|.
T Consensus 6 ~dVvIVGgG~aGl~aA~~La~~~~~G~~-V~liE~ 39 (538)
T 2aqj_A 6 KNIVIVGGGTAGWMAASYLVRALQQQAN-ITLIES 39 (538)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCSSCE-EEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhhcCCCCE-EEEECC
Confidence 468889999987666554444 7888 999996
No 396
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=42.78 E-value=35 Score=22.09 Aligned_cols=52 Identities=12% Similarity=0.057 Sum_probs=31.7
Q ss_pred ceEEeecCCCCHHHHHHHHHCC--CCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC
Q 032721 67 KRLVDVGGSAGDCLRMILQKHP--FICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS 121 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p--~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~ 121 (135)
.+|+=.| |+|.++..++++.- +.+ ++++++ +...+.. ...+++++.+|+.+.
T Consensus 4 ~~ilVtG-atG~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~-~~~~~~~~~~D~~~~ 58 (206)
T 1hdo_A 4 KKIAIFG-ATGQTGLTTLAQAVQAGYE-VTVLVRDSSRLPSE-GPRPAHVVVGDVLQA 58 (206)
T ss_dssp CEEEEES-TTSHHHHHHHHHHHHTTCE-EEEEESCGGGSCSS-SCCCSEEEESCTTSH
T ss_pred CEEEEEc-CCcHHHHHHHHHHHHCCCe-EEEEEeChhhcccc-cCCceEEEEecCCCH
Confidence 3566454 67877776665432 345 888887 4322211 136789999998753
No 397
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=42.71 E-value=14 Score=27.65 Aligned_cols=31 Identities=19% Similarity=0.163 Sum_probs=22.9
Q ss_pred ceEEeecCCCCHHHHHHHHH--CCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQK--HPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~--~p~l~~~~~~D~ 98 (135)
.+|+=||||.+.++.+..-+ .++.+ ++++|.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~-Vtlie~ 35 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLK-ITLISD 35 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCE-EEEECS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCe-EEEECC
Confidence 46888999998765544433 37788 999986
No 398
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=42.65 E-value=23 Score=23.92 Aligned_cols=61 Identities=18% Similarity=0.198 Sum_probs=35.7
Q ss_pred ceEEeecCCCCHHHHHHHHHCC--CCCeeEEeec-hHHHHhCCCCCCc-EEEecCCCCCCC----CCcEEEe
Q 032721 67 KRLVDVGGSAGDCLRMILQKHP--FICEGINFDL-PEVVAEAPSIPGV-THIGGDMFKSIP----AADAIFM 130 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p--~l~~~~~~D~-p~~~~~a~~~~rv-~~~~gd~~~~~p----~~D~~~l 130 (135)
.+|+=.| |+|.++.+++++.- +.+ ++++++ +...+... ..++ +++.+|+.+.+. ..|+++.
T Consensus 22 ~~ilVtG-atG~iG~~l~~~L~~~G~~-V~~~~R~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~D~vi~ 90 (236)
T 3e8x_A 22 MRVLVVG-ANGKVARYLLSELKNKGHE-PVAMVRNEEQGPELR-ERGASDIVVANLEEDFSHAFASIDAVVF 90 (236)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCE-EEEEESSGGGHHHHH-HTTCSEEEECCTTSCCGGGGTTCSEEEE
T ss_pred CeEEEEC-CCChHHHHHHHHHHhCCCe-EEEEECChHHHHHHH-hCCCceEEEcccHHHHHHHHcCCCEEEE
Confidence 4566455 67776666665432 345 888887 44333221 1468 899999873332 3477764
No 399
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=42.37 E-value=24 Score=25.73 Aligned_cols=44 Identities=11% Similarity=0.080 Sum_probs=31.5
Q ss_pred CCCcceEEeecCCC-CHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC
Q 032721 63 FKGVKRLVDVGGSA-GDCLRMILQKHPFICEGINFDL-PEVVAEAPS 107 (135)
Q Consensus 63 ~~~~~~vvDvGgG~-G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~ 107 (135)
.....+|+-+|+|. |.++..+++....-+ +++.|. ++-.+.+++
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~-Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQ-VVVTDLSATRLSKAKE 214 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSE-EEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCE-EEEECCCHHHHHHHHH
Confidence 55557888888765 888888998774336 889986 666665543
No 400
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=42.14 E-value=22 Score=27.28 Aligned_cols=30 Identities=7% Similarity=-0.129 Sum_probs=25.1
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
.|+=||+|.|.++.++..+.-+++ ++++|.
T Consensus 10 DvvVIGgG~aGl~aA~~la~~G~~-V~liE~ 39 (492)
T 3ic9_A 10 DVAIIGTGTAGMGAYRAAKKHTDK-VVLIEG 39 (492)
T ss_dssp EEEEECCSHHHHHHHHHHHTTCSC-EEEEES
T ss_pred CEEEECCCHHHHHHHHHHHhCCCc-EEEEeC
Confidence 578899999998887777666888 999996
No 401
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=41.93 E-value=13 Score=28.27 Aligned_cols=32 Identities=16% Similarity=0.035 Sum_probs=25.4
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeech
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDLP 99 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p 99 (135)
++|+=||+|.+.++.+..-+.-..+ +++++..
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~-V~VlEa~ 33 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIP-VLLLEQR 33 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCC-EEEECCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCc-EEEEccC
Confidence 5788999999988877665555778 9999863
No 402
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=41.68 E-value=18 Score=26.57 Aligned_cols=31 Identities=10% Similarity=-0.033 Sum_probs=24.4
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||||.+.++.++.-+..+++ ++++|.
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~-V~viE~ 37 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHR-VVVVEQ 37 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCc-EEEEeC
Confidence 4688899998877776666556788 999996
No 403
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=41.62 E-value=24 Score=26.19 Aligned_cols=31 Identities=16% Similarity=0.100 Sum_probs=23.9
Q ss_pred ceEEeecCCCCH--HHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGD--CLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~--~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||+|... .+..|++++|+++ ++++|.
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~-V~vlE~ 69 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRS-LLLVEE 69 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSC-EEEECS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCe-EEEEeC
Confidence 468889998764 4446667778999 999996
No 404
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=41.57 E-value=14 Score=27.05 Aligned_cols=19 Identities=16% Similarity=0.410 Sum_probs=12.8
Q ss_pred hccCCCCC-CcceEEeecCCC
Q 032721 57 LDGYDGFK-GVKRLVDVGGSA 76 (135)
Q Consensus 57 ~~~~~~~~-~~~~vvDvGgG~ 76 (135)
...++ ++ ....++|||||+
T Consensus 123 ~~~~~-~~~~~~lviDIGGGS 142 (315)
T 3mdq_A 123 QQAVP-MEDHISLAMDIGGGS 142 (315)
T ss_dssp HHHSC-CTTCCEEEEEECSSC
T ss_pred HhcCC-CCCCCEEEEEeCCCc
Confidence 33444 43 346899999997
No 405
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=41.51 E-value=19 Score=27.26 Aligned_cols=30 Identities=10% Similarity=0.001 Sum_probs=26.2
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
.|+=||||.+.++.++.-+..+++ ++++|.
T Consensus 8 dVvIVGaG~aGl~aA~~La~~G~~-V~vlE~ 37 (453)
T 3atr_A 8 DVLIIGGGFAGSSAAYQLSRRGLK-ILLVDS 37 (453)
T ss_dssp SEEEECCSHHHHHHHHHHSSSSCC-EEEECS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEEC
Confidence 588899999988888888777889 999997
No 406
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=41.29 E-value=17 Score=26.38 Aligned_cols=31 Identities=13% Similarity=0.125 Sum_probs=23.8
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeech
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDLP 99 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p 99 (135)
.|+=||||...++.++.-+..+++ ++++|..
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G~~-V~l~E~~ 36 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYGLK-TLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-EEEEeCC
Confidence 578899999876666655555788 9999973
No 407
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=41.05 E-value=16 Score=26.96 Aligned_cols=31 Identities=16% Similarity=0.195 Sum_probs=25.6
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||||.+.++.++.-+..+++ ++++|.
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~G~~-v~v~E~ 36 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDAGVD-VDVYER 36 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCC-EEEEec
Confidence 4688899999988777776666788 999997
No 408
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=41.03 E-value=19 Score=25.71 Aligned_cols=32 Identities=3% Similarity=-0.242 Sum_probs=25.3
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeech
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDLP 99 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p 99 (135)
..|+=||||...++.++.-+....+ ++++|..
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~-V~vlE~~ 36 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHE-VLVAEAA 36 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCe-EEEEeCC
Confidence 3588899999887777666667888 9999974
No 409
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=40.87 E-value=13 Score=28.89 Aligned_cols=32 Identities=19% Similarity=0.260 Sum_probs=23.9
Q ss_pred ceEEeecCCCCHHHHHHHHHC------------CCCCeeEEeech
Q 032721 67 KRLVDVGGSAGDCLRMILQKH------------PFICEGINFDLP 99 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~------------p~l~~~~~~D~p 99 (135)
..|+=||||+..++.++.-+. ++++ ++++|.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~-V~liE~~ 51 (526)
T 2pyx_A 8 TEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLN-ITLIESP 51 (526)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCE-EEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCe-EEEEeCC
Confidence 468889999987666555444 7788 9999963
No 410
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=40.81 E-value=16 Score=25.60 Aligned_cols=30 Identities=10% Similarity=0.118 Sum_probs=22.4
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
-|+=||+|.+.++.++..+.-+++ ++++|.
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~-v~liE~ 35 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLK-PVMYEG 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-CEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCC-EEEEec
Confidence 478899999887776555445677 888885
No 411
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=40.70 E-value=21 Score=25.19 Aligned_cols=31 Identities=16% Similarity=0.052 Sum_probs=23.7
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||||.+.++.++..+....+ ++++|.
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~-v~lie~ 47 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFS-VAILDK 47 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCc-EEEEeC
Confidence 4688899999877766655545678 999985
No 412
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=40.61 E-value=25 Score=26.64 Aligned_cols=30 Identities=17% Similarity=-0.020 Sum_probs=25.2
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
.|+=||+|.+.++.++..+.-+.+ ++++|.
T Consensus 7 DVvVIGaG~aGl~aA~~la~~G~~-V~liEk 36 (463)
T 4dna_A 7 DLFVIGGGSGGVRSGRLAAALGKK-VAIAEE 36 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCC-EEEEES
T ss_pred cEEEECcCHHHHHHHHHHHhCCCE-EEEEeC
Confidence 578899999988888777766888 999995
No 413
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=40.23 E-value=13 Score=27.19 Aligned_cols=30 Identities=13% Similarity=0.098 Sum_probs=24.2
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
.|+=||||.+.++.++.-+..+++ ++++|.
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~-v~v~E~ 33 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGID-NVILER 33 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCC-EEEECS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCC-EEEEeC
Confidence 588899999887776666555788 999997
No 414
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=40.17 E-value=16 Score=28.18 Aligned_cols=30 Identities=17% Similarity=-0.028 Sum_probs=24.1
Q ss_pred ceEEeecCCCCHHHHHHHHHC-CCCCeeEEee
Q 032721 67 KRLVDVGGSAGDCLRMILQKH-PFICEGINFD 97 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D 97 (135)
..|+=||||.|.++.++..+. .+.+ ++++|
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~~G~~-V~liE 34 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASLHKKR-VAVID 34 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCC-EEEEE
T ss_pred ccEEEECCCHHHHHHHHHHHHHcCCE-EEEEe
Confidence 358889999998777666555 6788 99999
No 415
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=39.84 E-value=22 Score=28.75 Aligned_cols=39 Identities=13% Similarity=0.129 Sum_probs=31.8
Q ss_pred CcceEEeecCCCCHHHHHHHHHCC--------CCCeeEEeechHHHHh
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHP--------FICEGINFDLPEVVAE 104 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p--------~l~~~~~~D~p~~~~~ 104 (135)
+...||-+|||.=.....|...+| +++ +.-+|+|++++.
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~-~~EvD~p~v~~~ 153 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVS-FIDIDYSDLLKI 153 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEE-EEEEECHHHHHH
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCE-EEECccHHHHHH
Confidence 457999999999999999988866 555 777788988754
No 416
>1t0c_A Insulin; type I beta-turn, BEND, type III' beta-turn, hormone/growth factor complex; NMR {Homo sapiens}
Probab=39.72 E-value=5.4 Score=18.32 Aligned_cols=9 Identities=44% Similarity=1.040 Sum_probs=6.9
Q ss_pred EeecCCCCH
Q 032721 70 VDVGGSAGD 78 (135)
Q Consensus 70 vDvGgG~G~ 78 (135)
|++|||.|.
T Consensus 10 velgggpga 18 (31)
T 1t0c_A 10 VELGGGPGA 18 (31)
T ss_dssp TSCCCSTTS
T ss_pred EEecCCCCc
Confidence 578888875
No 417
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=39.70 E-value=22 Score=25.14 Aligned_cols=32 Identities=13% Similarity=0.174 Sum_probs=23.9
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeech
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDLP 99 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p 99 (135)
..|+=||+|.+.++.++..+....+ ++++|..
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~-v~lie~~ 40 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLS-TLILEKG 40 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCc-EEEEeCC
Confidence 4688999999887766555445678 9998863
No 418
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=39.63 E-value=44 Score=21.58 Aligned_cols=60 Identities=13% Similarity=0.163 Sum_probs=34.8
Q ss_pred ceEEeecCCCCHHHHHHHHHC--C-CCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC--------CCCCcEEEe
Q 032721 67 KRLVDVGGSAGDCLRMILQKH--P-FICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS--------IPAADAIFM 130 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~--p-~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~--------~p~~D~~~l 130 (135)
.+|+=+|+ |.++..+++.. . +.+ ++++|. ++.++.++. ..+..+.+|..+. +..+|+++.
T Consensus 40 ~~v~IiG~--G~~G~~~a~~L~~~~g~~-V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~ 111 (183)
T 3c85_A 40 AQVLILGM--GRIGTGAYDELRARYGKI-SLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLL 111 (183)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHHHCSC-EEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEE
T ss_pred CcEEEECC--CHHHHHHHHHHHhccCCe-EEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEE
Confidence 46777776 44444433321 1 457 999998 766665443 2456677776432 224587775
No 419
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=39.61 E-value=19 Score=25.90 Aligned_cols=29 Identities=14% Similarity=0.147 Sum_probs=23.1
Q ss_pred EEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 69 LVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 69 vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
|+=||+|...++.++.-+.-+++ ++++|.
T Consensus 7 ViIVGaGpaGl~~A~~La~~G~~-V~v~Er 35 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKYGLK-TLMIEK 35 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred EEEECcCHHHHHHHHHHHHCCCc-EEEEeC
Confidence 67799999877776666666888 999996
No 420
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=39.48 E-value=23 Score=26.78 Aligned_cols=31 Identities=19% Similarity=0.018 Sum_probs=24.4
Q ss_pred ceEEeecCCCCHHH--HHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCL--RMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~--~~l~~~~p~l~~~~~~D~ 98 (135)
.+|+=||||.+.++ ..+++..|+.+ ++++|.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~-V~vie~ 35 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAE-ISLIDK 35 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSE-EEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCc-EEEEEC
Confidence 36888999998654 45677778888 999986
No 421
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=39.34 E-value=29 Score=25.58 Aligned_cols=45 Identities=11% Similarity=-0.018 Sum_probs=32.8
Q ss_pred CCCcceEEeecCC-CCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC
Q 032721 63 FKGVKRLVDVGGS-AGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI 108 (135)
Q Consensus 63 ~~~~~~vvDvGgG-~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~ 108 (135)
.....+|+=+|+| .|.++..+++....-+ +++.|. ++-++.+++.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~-Vi~~~~~~~~~~~a~~l 237 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASR-IIGIDIDSKKYETAKKF 237 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSC-EEEECSCTTHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCe-EEEEcCCHHHHHHHHHc
Confidence 5555778878875 3788888888765447 999996 7777776654
No 422
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=39.31 E-value=33 Score=23.93 Aligned_cols=63 Identities=14% Similarity=0.143 Sum_probs=30.9
Q ss_pred eEEeecCCC-C-HHHHHHHHHCCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCCCC-CCcEEEec
Q 032721 68 RLVDVGGSA-G-DCLRMILQKHPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIP-AADAIFMK 131 (135)
Q Consensus 68 ~vvDvGgG~-G-~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~~p-~~D~~~l~ 131 (135)
+|.=||+|. | .++..+.+.....+ ++++|. ++.++.+.+..-......|.-+.+. .+|++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~-V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVila 69 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGK-IYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS 69 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSE-EEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcE-EEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEc
Confidence 566677654 2 23333433322236 899998 6666554332111111223322245 67888764
No 423
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=38.84 E-value=20 Score=26.52 Aligned_cols=31 Identities=13% Similarity=0.123 Sum_probs=24.4
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||||...++.++.-+.-+++ ++++|.
T Consensus 24 ~dV~IVGaG~aGl~~A~~La~~G~~-V~v~E~ 54 (407)
T 3rp8_A 24 MKAIVIGAGIGGLSAAVALKQSGID-CDVYEA 54 (407)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC-EEEEeC
Confidence 4688899999877766666555788 999996
No 424
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=38.72 E-value=14 Score=32.16 Aligned_cols=62 Identities=16% Similarity=0.106 Sum_probs=42.3
Q ss_pred CcceEEeecCCCCHHHHHHHHHCC-CCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC-C---CCCcEEEe
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHP-FICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-I---PAADAIFM 130 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p-~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-~---p~~D~~~l 130 (135)
...+++|+|.|.=+ .++.-.| ++. ++.+|. |.+...+-=+.+-+|+.+||+.+ + +.+|++..
T Consensus 821 ~~~~~lDlGTGPE~---RiLsLiP~~~p-vtm~D~RP~ae~~~~w~~~T~f~~~DyL~~~~~~~~~~D~vt~ 888 (1289)
T 1ej6_A 821 DGDVVLDLGTGPEA---KILELIPATSP-VTCVDIRPTAQPSGCWNVRTTFLELDYLSDGWITGVRGDIVTC 888 (1289)
T ss_dssp TTCCEEEESCCSSC---GGGGTSCTTSC-EEEEESSCCCSCSTTBSSCEEEEESCTTSSSCGGGCCCSEEEE
T ss_pred ccceEEEccCCCcc---eeeeecCCCCc-eEEecccCchhhhccccccceeeEccccccceeecCCCcEEEE
Confidence 34789999988764 2333445 466 999998 54444333346789999999987 2 45688764
No 425
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=38.27 E-value=17 Score=25.32 Aligned_cols=31 Identities=10% Similarity=0.120 Sum_probs=23.5
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEE-eec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGIN-FDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~-~D~ 98 (135)
..|+=||+|.+.++.+..-+..+.+ +++ +|.
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~g~~-v~li~e~ 36 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRGGLK-NVVMFEK 36 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCS-CEEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCC-eEEEEeC
Confidence 5788899999977766555445677 888 885
No 426
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=38.19 E-value=52 Score=25.22 Aligned_cols=66 Identities=14% Similarity=0.027 Sum_probs=38.3
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec---hHHHHhCCCCCCcEEEecCCCCC-CCCCcEEEec
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL---PEVVAEAPSIPGVTHIGGDMFKS-IPAADAIFMK 131 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~---p~~~~~a~~~~rv~~~~gd~~~~-~p~~D~~~l~ 131 (135)
+++ ++|+=||||.=.....-.-..-+.+ ++++|. ++..+.+ ...+++++.++|-.. +..+|+++..
T Consensus 10 l~~-~~vlVvGgG~va~~k~~~L~~~ga~-V~vi~~~~~~~~~~l~-~~~~i~~~~~~~~~~~l~~~~lVi~a 79 (457)
T 1pjq_A 10 LRD-RDCLIVGGGDVAERKARLLLEAGAR-LTVNALTFIPQFTVWA-NEGMLTLVEGPFDETLLDSCWLAIAA 79 (457)
T ss_dssp CBT-CEEEEECCSHHHHHHHHHHHHTTBE-EEEEESSCCHHHHHHH-TTTSCEEEESSCCGGGGTTCSEEEEC
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHhCcCE-EEEEcCCCCHHHHHHH-hcCCEEEEECCCCccccCCccEEEEc
Confidence 443 6788899887544443222223456 888885 3322222 235788888877544 5556887753
No 427
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=38.10 E-value=21 Score=27.47 Aligned_cols=30 Identities=13% Similarity=0.071 Sum_probs=23.9
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
.|+=||||.+.+..+...+..+.+ ++++|.
T Consensus 4 dVvIIGgG~aGl~aA~~l~~~g~~-V~liE~ 33 (500)
T 1onf_A 4 DLIVIGGGSGGMAAARRAARHNAK-VALVEK 33 (500)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHCCCc-EEEEeC
Confidence 478899999987776665556788 999995
No 428
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=37.93 E-value=22 Score=27.19 Aligned_cols=30 Identities=13% Similarity=-0.063 Sum_probs=24.6
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
.|+=||+|.+.++.++..+.-+.+ ++++|.
T Consensus 28 DVvVIGgG~aGl~aA~~la~~G~~-V~liEk 57 (484)
T 3o0h_A 28 DLFVIGSGSGGVRAARLAGALGKR-VAIAEE 57 (484)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred CEEEECcCHHHHHHHHHHHhCcCE-EEEEeC
Confidence 588899999988877766656788 999995
No 429
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=37.93 E-value=28 Score=24.43 Aligned_cols=31 Identities=6% Similarity=0.084 Sum_probs=24.1
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||+|.+.++.++.-+....+ ++++|.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~-v~lie~ 36 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQ-PVLITG 36 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC-CEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCc-EEEEcc
Confidence 4688899999987777766656778 888884
No 430
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=37.76 E-value=23 Score=25.64 Aligned_cols=45 Identities=22% Similarity=0.145 Sum_probs=32.8
Q ss_pred CCCcceEEeecCCC-CHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC
Q 032721 63 FKGVKRLVDVGGSA-GDCLRMILQKHPFICEGINFDL-PEVVAEAPSI 108 (135)
Q Consensus 63 ~~~~~~vvDvGgG~-G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~ 108 (135)
.....+|+-+|+|. |.++..+++.....+ +++.|. ++-.+.+++.
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~-Vi~~~~~~~~~~~~~~l 215 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAAR-VIAVDLDDDRLALAREV 215 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCE-EEEEESCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCE-EEEEcCCHHHHHHHHHc
Confidence 44456788787654 888899998876677 999987 6666665543
No 431
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=37.72 E-value=24 Score=26.79 Aligned_cols=32 Identities=3% Similarity=-0.099 Sum_probs=24.8
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeech
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDLP 99 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p 99 (135)
..|+=||+|.+.++.+...+..+.+ ++++|..
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~-V~lie~~ 36 (467)
T 1zk7_A 5 VQVAVIGSGGAAMAAALKAVEQGAQ-VTLIERG 36 (467)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE-EEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCE-EEEEeCC
Confidence 4688899999987776655555778 9999963
No 432
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=37.62 E-value=22 Score=27.17 Aligned_cols=30 Identities=13% Similarity=0.101 Sum_probs=23.9
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
.|+=||+|.+.++.++..+..+.+ ++++|.
T Consensus 27 dVvVIGgG~aGl~aA~~la~~G~~-V~liEk 56 (491)
T 3urh_A 27 DLIVIGSGPGGYVCAIKAAQLGMK-VAVVEK 56 (491)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHCCCe-EEEEec
Confidence 588899999987776665555778 999995
No 433
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=37.40 E-value=23 Score=27.08 Aligned_cols=64 Identities=14% Similarity=0.137 Sum_probs=37.3
Q ss_pred ceEEeecCCCCHHHHHH----HHHCCCC--CeeEEeec-hHHHHhCCC------CCCcEEEe-cCCCCCCCCCcEEEec
Q 032721 67 KRLVDVGGSAGDCLRMI----LQKHPFI--CEGINFDL-PEVVAEAPS------IPGVTHIG-GDMFKSIPAADAIFMK 131 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l----~~~~p~l--~~~~~~D~-p~~~~~a~~------~~rv~~~~-gd~~~~~p~~D~~~l~ 131 (135)
.+|.=||+|+. ++..+ +.+.+.+ ..++++|+ ++.++.+.. ...+++.. .|..+.+..+|+|+..
T Consensus 3 ~KI~IIGaG~v-~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~~~~~~~~v~~t~d~~~al~~AD~Viit 80 (417)
T 1up7_A 3 MRIAVIGGGSS-YTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQ 80 (417)
T ss_dssp CEEEEETTTCT-THHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEEC
T ss_pred CEEEEECCCHH-HHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHHHhhCCeEEEEeCCHHHHhCCCCEEEEc
Confidence 36778999987 65554 5544444 23899998 544333211 11255554 4543446678998764
No 434
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=37.39 E-value=18 Score=27.86 Aligned_cols=30 Identities=17% Similarity=-0.096 Sum_probs=24.0
Q ss_pred ceEEeecCCCCHHHHHHHHHC-CCCCeeEEee
Q 032721 67 KRLVDVGGSAGDCLRMILQKH-PFICEGINFD 97 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D 97 (135)
..|+=||||.|.+..+...+. .+.+ ++++|
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~~G~~-V~liE 38 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATLYGKR-VAVVD 38 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCC-EEEEE
T ss_pred cCEEEECCChhHHHHHHHHHHhcCCe-EEEEe
Confidence 468889999998777665555 6788 99999
No 435
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=37.23 E-value=26 Score=25.31 Aligned_cols=53 Identities=13% Similarity=-0.017 Sum_probs=31.7
Q ss_pred ceEEeecCCCCHHHHHHHHHC----CCCCeeEEeec-hH-------HHHhCC-----CCCCcEEEecCCCCC
Q 032721 67 KRLVDVGGSAGDCLRMILQKH----PFICEGINFDL-PE-------VVAEAP-----SIPGVTHIGGDMFKS 121 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~----p~l~~~~~~D~-p~-------~~~~a~-----~~~rv~~~~gd~~~~ 121 (135)
.+|+=.| |+|.++..++++. .+.+ ++++|. +. ..+... ...++.++.+|+.+.
T Consensus 11 ~~vlVTG-atG~IG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 80 (362)
T 3sxp_A 11 QTILITG-GAGFVGSNLAFHFQENHPKAK-VVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNP 80 (362)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHHCTTSE-EEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCH
T ss_pred CEEEEEC-CCCHHHHHHHHHHHhhCCCCe-EEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCH
Confidence 4566444 6887777666543 5667 999987 32 111111 114689999999754
No 436
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=37.14 E-value=29 Score=27.25 Aligned_cols=32 Identities=22% Similarity=0.144 Sum_probs=25.5
Q ss_pred cceEEeecCCCCHHHH--HHHHHCCCCCeeEEeec
Q 032721 66 VKRLVDVGGSAGDCLR--MILQKHPFICEGINFDL 98 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~--~l~~~~p~l~~~~~~D~ 98 (135)
..+|+=||||.+.++. .|++..|+.+ ++++|.
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~-V~vie~ 69 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDE-IIMVER 69 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSE-EEEECS
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCC-EEEEEC
Confidence 4689999999986544 5667777888 999986
No 437
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=36.96 E-value=20 Score=26.15 Aligned_cols=31 Identities=16% Similarity=-0.045 Sum_probs=24.3
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||||.+.++.++.-+..+++ ++++|.
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~G~~-v~viE~ 42 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQNGWD-VRLHEK 42 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCC-EEEEec
Confidence 4688899999877776666555778 999986
No 438
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=36.76 E-value=34 Score=23.89 Aligned_cols=29 Identities=14% Similarity=0.033 Sum_probs=23.0
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEee
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFD 97 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D 97 (135)
.|+=||+|.+.++.++..+..+.+ ++++|
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~-v~li~ 31 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIR-TGLMG 31 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCC-EEEEC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCc-EEEEe
Confidence 577899999988777776666778 88876
No 439
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=36.46 E-value=26 Score=24.55 Aligned_cols=30 Identities=10% Similarity=0.118 Sum_probs=22.5
Q ss_pred eEEeecCCCCHHHHHHHHHCCCC-CeeEEeec
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFI-CEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l-~~~~~~D~ 98 (135)
.|+=||+|.+.++.++.-+..+. + ++++|.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~-v~lie~ 33 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKN-AVLFEK 33 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSS-EEEECS
T ss_pred eEEEECccHHHHHHHHHHHHCCCCc-EEEEcC
Confidence 57789999988777665544467 7 999986
No 440
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=36.43 E-value=47 Score=22.38 Aligned_cols=59 Identities=14% Similarity=0.108 Sum_probs=30.6
Q ss_pred ceEEeecCCCCHHHHHHHHHC--CCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCCCCCCcEEEec
Q 032721 67 KRLVDVGGSAGDCLRMILQKH--PFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMK 131 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~--p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~~p~~D~~~l~ 131 (135)
.+|.=||+ |.++..+++.. .+.+ ++++|. ++..+...+. .+... +.-+.+..+|++++.
T Consensus 29 ~~I~iiG~--G~~G~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~-g~~~~--~~~~~~~~~DvVi~a 90 (215)
T 2vns_A 29 PKVGILGS--GDFARSLATRLVGSGFK-VVVGSRNPKRTARLFPS-AAQVT--FQEEAVSSPEVIFVA 90 (215)
T ss_dssp CCEEEECC--SHHHHHHHHHHHHTTCC-EEEEESSHHHHHHHSBT-TSEEE--EHHHHTTSCSEEEEC
T ss_pred CEEEEEcc--CHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHc-CCcee--cHHHHHhCCCEEEEC
Confidence 46777875 44444333321 1346 889998 5555544332 34432 321224456877753
No 441
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=36.38 E-value=29 Score=26.30 Aligned_cols=31 Identities=13% Similarity=0.091 Sum_probs=24.8
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||+|.+.++.+..-+..+.+ ++++|.
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~-V~vlE~ 42 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKK-VLHIDK 42 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCe-EEEEeC
Confidence 3588899999988877766666778 999985
No 442
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=36.11 E-value=15 Score=27.44 Aligned_cols=25 Identities=24% Similarity=0.349 Sum_probs=17.6
Q ss_pred ceEEeecCCCCH--HHHHHHHHCCCCC
Q 032721 67 KRLVDVGGSAGD--CLRMILQKHPFIC 91 (135)
Q Consensus 67 ~~vvDvGgG~G~--~~~~l~~~~p~l~ 91 (135)
.+||=+|||+|. ++..|.+.-.++.
T Consensus 11 ~kIVvigGGtGl~~ll~gLk~~~~~iT 37 (341)
T 2p0y_A 11 PKIVVIGGGTGLPVVLNGLRKQAVDIT 37 (341)
T ss_dssp CEEEEECCGGGHHHHHHHHHHSSSEEE
T ss_pred CeEEEECCcccHHHHHHHHHhCCCCeE
Confidence 589999999994 6666666544444
No 443
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=36.09 E-value=25 Score=26.19 Aligned_cols=31 Identities=13% Similarity=-0.049 Sum_probs=23.4
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCC-CeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFI-CEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l-~~~~~~D~ 98 (135)
..|+=||+|...++.++..+.... + ++++|.
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~-V~vlE~ 38 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTN-VTVLDP 38 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCC-EEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCc-EEEEeC
Confidence 358889999887776655544566 7 999997
No 444
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=36.04 E-value=23 Score=25.10 Aligned_cols=31 Identities=19% Similarity=0.177 Sum_probs=22.9
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||+|.+.++.++.-+..+.+ ++++|.
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~-v~lie~ 39 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELK-PLLFEG 39 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-CEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCe-EEEEec
Confidence 4688899999877666555445677 888885
No 445
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=35.92 E-value=32 Score=27.49 Aligned_cols=53 Identities=13% Similarity=0.200 Sum_probs=33.3
Q ss_pred ceEEeecCCCCHHHHHHHHHC---CCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC
Q 032721 67 KRLVDVGGSAGDCLRMILQKH---PFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS 121 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~---p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~ 121 (135)
.+|+=. ||+|.++..++++. ++.+ +++++. +..........+++++.+|+.+.
T Consensus 316 ~~VLVT-GatG~IG~~l~~~Ll~~~g~~-V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~ 372 (660)
T 1z7e_A 316 TRVLIL-GVNGFIGNHLTERLLREDHYE-VYGLDIGSDAISRFLNHPHFHFVEGDISIH 372 (660)
T ss_dssp EEEEEE-TTTSHHHHHHHHHHHHSSSEE-EEEEESCCTTTGGGTTCTTEEEEECCTTTC
T ss_pred ceEEEE-cCCcHHHHHHHHHHHhcCCCE-EEEEEcCchhhhhhccCCceEEEECCCCCc
Confidence 456644 56888777776643 3446 888887 33222222336799999999753
No 446
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=35.80 E-value=64 Score=21.69 Aligned_cols=61 Identities=18% Similarity=0.321 Sum_probs=37.5
Q ss_pred ceEEeecCCCCHHHHHHHHHCCC---CCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC--C----CCCcEEEe
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPF---ICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS--I----PAADAIFM 130 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~---l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~--~----p~~D~~~l 130 (135)
++|+ |=||+|.++.+++++.-. .+ ++++++ ++.++.. ...+++++.+|+.+. + ...|+++.
T Consensus 24 k~vl-VtGatG~iG~~l~~~L~~~G~~~-V~~~~R~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~ 94 (236)
T 3qvo_A 24 KNVL-ILGAGGQIARHVINQLADKQTIK-QTLFARQPAKIHKP-YPTNSQIIMGDVLNHAALKQAMQGQDIVYA 94 (236)
T ss_dssp EEEE-EETTTSHHHHHHHHHHTTCTTEE-EEEEESSGGGSCSS-CCTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred cEEE-EEeCCcHHHHHHHHHHHhCCCce-EEEEEcChhhhccc-ccCCcEEEEecCCCHHHHHHHhcCCCEEEE
Confidence 4566 445678887777776543 45 888887 4322211 225799999999764 2 22477763
No 447
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=35.76 E-value=26 Score=25.38 Aligned_cols=31 Identities=13% Similarity=-0.019 Sum_probs=23.9
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||||...++.++.-+..+++ ++++|.
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~-V~llE~ 48 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKN-TALFES 48 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCc-EEEEeC
Confidence 5688899998876666655556788 999996
No 448
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=35.64 E-value=26 Score=24.83 Aligned_cols=31 Identities=13% Similarity=0.136 Sum_probs=23.6
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||||.+.++.+..-+.-+.+ ++++|.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~-v~vie~ 34 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLS-YVILDA 34 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCC-EEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC-EEEEEC
Confidence 3578899999877666655555778 999996
No 449
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=35.38 E-value=41 Score=23.19 Aligned_cols=60 Identities=12% Similarity=0.101 Sum_probs=36.8
Q ss_pred ceEEeecCCCCHHHHHHHHHCC--CCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC-CCCCcEEEe
Q 032721 67 KRLVDVGGSAGDCLRMILQKHP--FICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-IPAADAIFM 130 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p--~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-~p~~D~~~l 130 (135)
.+|+=.| + |.++..++++.- +.+ ++++++ +.-..... ..+++++.+|+.+. +...|+++-
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~d~vi~ 69 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWR-IIGTSRNPDQMEAIR-ASGAEPLLWPGEEPSLDGVTHLLI 69 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCE-EEEEESCGGGHHHHH-HTTEEEEESSSSCCCCTTCCEEEE
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCE-EEEEEcChhhhhhHh-hCCCeEEEecccccccCCCCEEEE
Confidence 4677778 5 888887776543 345 888887 33222111 15788999998542 333476654
No 450
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=35.19 E-value=29 Score=25.12 Aligned_cols=67 Identities=12% Similarity=0.036 Sum_probs=42.6
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC-CCcEEEecCCCCC----CC---CCcEEEec
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI-PGVTHIGGDMFKS----IP---AADAIFMK 131 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~-~rv~~~~gd~~~~----~p---~~D~~~l~ 131 (135)
..-+++|+=||.|.+..++.+..-+...+...|. +..++.-+.+ +...+..+|..+- +| ..|+++..
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEec
Confidence 3468999999999999999887422211367788 6665543332 4455667787542 22 34777653
No 451
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=35.16 E-value=35 Score=23.44 Aligned_cols=52 Identities=10% Similarity=0.041 Sum_probs=27.9
Q ss_pred eEEeecCCCC---HHHHHHHHHCCCCCeeEEeec-hHHHHhCCC--CCCcEEEecCCCC
Q 032721 68 RLVDVGGSAG---DCLRMILQKHPFICEGINFDL-PEVVAEAPS--IPGVTHIGGDMFK 120 (135)
Q Consensus 68 ~vvDvGgG~G---~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~--~~rv~~~~gd~~~ 120 (135)
+++=.||+.| .++..++++..+.. +++.+. ++.++...+ ..++.++.+|+-+
T Consensus 4 ~~lVTGas~GIG~aia~~l~~~g~~~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~ 61 (254)
T 3kzv_A 4 VILVTGVSRGIGKSIVDVLFSLDKDTV-VYGVARSEAPLKKLKEKYGDRFFYVVGDITE 61 (254)
T ss_dssp EEEECSTTSHHHHHHHHHHHHHCSSCE-EEEEESCHHHHHHHHHHHGGGEEEEESCTTS
T ss_pred EEEEECCCchHHHHHHHHHHhcCCCeE-EEEecCCHHHHHHHHHHhCCceEEEECCCCC
Confidence 4555555443 24444555544566 777776 444333221 1467777888754
No 452
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=35.13 E-value=35 Score=27.36 Aligned_cols=31 Identities=23% Similarity=0.028 Sum_probs=26.0
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||||.+.+..+..-+..+.+ ++++|.
T Consensus 374 ~~vvIIGgG~AGl~aA~~l~~~g~~-V~lie~ 404 (671)
T 1ps9_A 374 KNLAVVGAGPAGLAFAINAAARGHQ-VTLFDA 404 (671)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCE-EEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCe-EEEEeC
Confidence 5799999999988877776666778 999986
No 453
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=35.06 E-value=25 Score=25.18 Aligned_cols=30 Identities=17% Similarity=0.139 Sum_probs=24.2
Q ss_pred eEEeecCCCCHHHHHHHHHC---CCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLRMILQKH---PFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~---p~l~~~~~~D~ 98 (135)
.|+=||+|...++.++.-+. .+++ ++++|.
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~-V~v~Ek 35 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLY-LAVWDK 35 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEE-EEEECS
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCce-EEEEEC
Confidence 57889999988777776665 6778 999996
No 454
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=35.02 E-value=28 Score=26.59 Aligned_cols=31 Identities=13% Similarity=0.067 Sum_probs=25.0
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||+|.+.++.++..+..+.+ ++++|.
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~~G~~-V~liE~ 37 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAADEGLK-VAIVER 37 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCe-EEEEeC
Confidence 3588899999987777766666788 999996
No 455
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=35.01 E-value=28 Score=26.39 Aligned_cols=32 Identities=16% Similarity=0.145 Sum_probs=24.9
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeech
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDLP 99 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p 99 (135)
..|+=||+|.+.+..++..+..+.+ ++++|..
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~g~~-V~lie~~ 34 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQLGMK-TACVEKR 34 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCe-EEEEeCC
Confidence 3588899999987777665555788 9999973
No 456
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=34.98 E-value=29 Score=26.77 Aligned_cols=62 Identities=18% Similarity=0.215 Sum_probs=37.5
Q ss_pred cceEEeecCCC-CHHHHHHHHHCCCCCeeEEeec-hHHH-HhCCCCCCcEEEecCCCCC-------CCCCcEEEe
Q 032721 66 VKRLVDVGGSA-GDCLRMILQKHPFICEGINFDL-PEVV-AEAPSIPGVTHIGGDMFKS-------IPAADAIFM 130 (135)
Q Consensus 66 ~~~vvDvGgG~-G~~~~~l~~~~p~l~~~~~~D~-p~~~-~~a~~~~rv~~~~gd~~~~-------~p~~D~~~l 130 (135)
.++++=+|||. |..+...+++ ... +.++|. ++.+ ..+.+.++..++.||-.+. +..+|+++.
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~--~~~-v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia 306 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ--TYS-VKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIA 306 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT--TSE-EEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEE
T ss_pred ccEEEEEcchHHHHHHHHHhhh--cCc-eEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEE
Confidence 46888888765 3333333332 234 777766 4444 4455568889999998754 223677764
No 457
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=34.75 E-value=33 Score=25.85 Aligned_cols=30 Identities=13% Similarity=0.348 Sum_probs=23.0
Q ss_pred eEEeecCCCCHHH--HHHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCL--RMILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~--~~l~~~~p~l~~~~~~D~ 98 (135)
.|+=||+|.+.+. ..+++..|+.+ ++++|.
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~-V~lie~ 33 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDAD-VTAYEM 33 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCE-EEEEES
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCc-EEEEEC
Confidence 4788999998654 45566667888 999996
No 458
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=34.75 E-value=50 Score=24.27 Aligned_cols=32 Identities=34% Similarity=0.473 Sum_probs=21.1
Q ss_pred cceEEeecCCCCHHHH----HHHHHCCCCC-eeEEee
Q 032721 66 VKRLVDVGGSAGDCLR----MILQKHPFIC-EGINFD 97 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~----~l~~~~p~l~-~~~~~D 97 (135)
.-+|+|+|=|+|.-.. .+.+..|+.+ ..+-+|
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~E 133 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFE 133 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEE
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeec
Confidence 3589999999996332 3445678765 245555
No 459
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=34.73 E-value=32 Score=26.57 Aligned_cols=35 Identities=6% Similarity=-0.006 Sum_probs=27.4
Q ss_pred CCCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 63 FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 63 ~~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
+.....|+=||+|...++.++.-+..+++ ++++|.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~-v~vlE~ 42 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVE-VVVLER 42 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCC-EEEEeC
Confidence 33445788899999987777776667888 999996
No 460
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=34.70 E-value=41 Score=25.50 Aligned_cols=60 Identities=13% Similarity=0.108 Sum_probs=38.0
Q ss_pred ceEEeecCCCCHHHHHHHHHC--CCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC-------CCCCcEEEe
Q 032721 67 KRLVDVGGSAGDCLRMILQKH--PFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS-------IPAADAIFM 130 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~--p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~-------~p~~D~~~l 130 (135)
.+|+=+|+|. ++..+++.. -+.. ++++|. |+.++.++. ..+.++.||..++ +..+|+++.
T Consensus 5 ~~viIiG~Gr--~G~~va~~L~~~g~~-vvvId~d~~~v~~~~~-~g~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 5 MRVIIAGFGR--FGQITGRLLLSSGVK-MVVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CSEEEECCSH--HHHHHHHHHHHTTCC-EEEEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CeEEEECCCH--HHHHHHHHHHHCCCC-EEEEECCHHHHHHHHh-CCCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 4577777644 444433322 2467 999999 888887654 3566788888654 234677765
No 461
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=34.48 E-value=14 Score=28.33 Aligned_cols=31 Identities=19% Similarity=0.093 Sum_probs=23.1
Q ss_pred eEEeecCCCCHHHHHHHHHC---CCCCeeEEeech
Q 032721 68 RLVDVGGSAGDCLRMILQKH---PFICEGINFDLP 99 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~---p~l~~~~~~D~p 99 (135)
.|+=||||...++.++.-+. ++++ ++++|..
T Consensus 4 dVvIVGgG~aGl~~A~~La~~~~~G~~-V~lvE~~ 37 (511)
T 2weu_A 4 SVVIVGGGTAGWMTASYLKAAFDDRID-VTLVESG 37 (511)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHGGGSE-EEEEEC-
T ss_pred eEEEECCCHHHHHHHHHHHhhcCCCCE-EEEEecC
Confidence 57889999887666655544 7788 9999974
No 462
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=34.47 E-value=38 Score=26.55 Aligned_cols=31 Identities=16% Similarity=0.154 Sum_probs=25.0
Q ss_pred ceEEeecCCCCHHHHHHHHH-CCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQK-HPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~-~p~l~~~~~~D~ 98 (135)
..|+=||+|.+.++.+..-+ ..+.+ ++++|.
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~-v~viE~ 40 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLT-TVGFDK 40 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCC-EEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCC-EEEEEC
Confidence 46888999998877776665 67788 999996
No 463
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=34.33 E-value=23 Score=24.55 Aligned_cols=57 Identities=18% Similarity=0.171 Sum_probs=34.0
Q ss_pred ecCCCCHHHHHHHHHCC----CCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC--C----CCCcEEEe
Q 032721 72 VGGSAGDCLRMILQKHP----FICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS--I----PAADAIFM 130 (135)
Q Consensus 72 vGgG~G~~~~~l~~~~p----~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~--~----p~~D~~~l 130 (135)
|=||+|.++..++++.- +.+ +++++. +...+.. ...+++++.+|+.+. + ...|+++.
T Consensus 5 VtGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~l-~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~ 72 (287)
T 2jl1_A 5 VTGATGQLGGLVIQHLLKKVPASQ-IIAIVRNVEKASTL-ADQGVEVRHGDYNQPESLQKAFAGVSKLLF 72 (287)
T ss_dssp ETTTTSHHHHHHHHHHTTTSCGGG-EEEEESCTTTTHHH-HHTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred EEcCCchHHHHHHHHHHHhCCCCe-EEEEEcCHHHHhHH-hhcCCeEEEeccCCHHHHHHHHhcCCEEEE
Confidence 34578888887776543 456 888887 3211110 014688999999753 2 22477663
No 464
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=34.27 E-value=28 Score=24.97 Aligned_cols=32 Identities=19% Similarity=0.029 Sum_probs=22.6
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCC-CeeEEeech
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFI-CEGINFDLP 99 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l-~~~~~~D~p 99 (135)
..|+=||+|.+.++.+..-+..+. + ++++|..
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~-v~lie~~ 37 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITD-VIILEKG 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCC-EEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCc-EEEEecC
Confidence 368889999887665554433455 7 9999973
No 465
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=34.22 E-value=24 Score=26.12 Aligned_cols=30 Identities=23% Similarity=0.082 Sum_probs=23.0
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
.|+=||+|.+.++.+..-+..+.+ ++++|.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~-V~vlE~ 31 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHE-IIVLEK 31 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCe-EEEEeC
Confidence 578899999887776555445677 999996
No 466
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=34.20 E-value=43 Score=24.27 Aligned_cols=43 Identities=9% Similarity=-0.208 Sum_probs=30.3
Q ss_pred CCCcceEEeecCCC-CHHHHHHHHHCCCCCeeEEeec-hHHHHhCC
Q 032721 63 FKGVKRLVDVGGSA-GDCLRMILQKHPFICEGINFDL-PEVVAEAP 106 (135)
Q Consensus 63 ~~~~~~vvDvGgG~-G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~ 106 (135)
.....+|+-+|+|. |.++..+++....-+ +++.|. ++-++.++
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~-Vi~~~~~~~~~~~~~ 208 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGR-IFAVGSRKHCCDIAL 208 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSS-EEEECCCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcE-EEEECCCHHHHHHHH
Confidence 55557788788755 778888888764437 999998 65555554
No 467
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=34.18 E-value=35 Score=25.35 Aligned_cols=32 Identities=3% Similarity=-0.132 Sum_probs=25.7
Q ss_pred cceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 66 VKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 66 ~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..+||=||+|.+.+..+..-..++.+ ++++|.
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~-itlie~ 40 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDD-ITMINS 40 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSC-EEEECS
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCE-EEEEEC
Confidence 46889999999887776666777888 999975
No 468
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=33.88 E-value=26 Score=26.72 Aligned_cols=30 Identities=13% Similarity=-0.024 Sum_probs=23.7
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEee
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFD 97 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D 97 (135)
..|+=||+|.|.+..++..+.-..+ ++++|
T Consensus 10 ~DvvVIGgG~aGl~aA~~la~~G~~-V~liE 39 (483)
T 3dgh_A 10 YDLIVIGGGSAGLACAKEAVLNGAR-VACLD 39 (483)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEEC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCE-EEEEE
Confidence 4688899999988777655555778 99998
No 469
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=33.84 E-value=20 Score=26.97 Aligned_cols=31 Identities=13% Similarity=0.035 Sum_probs=25.5
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||||...++.++.-+...++ ++++|.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~-V~viE~ 53 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVD-VTVYTD 53 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCe-EEEEcC
Confidence 4688899999987777776666888 999996
No 470
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=33.72 E-value=28 Score=27.37 Aligned_cols=31 Identities=10% Similarity=0.095 Sum_probs=24.8
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||+|.+.++.+..-+.++++ ++++|.
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~-v~iiE~ 40 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMK-VLGIEA 40 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CCEEEECccHHHHHHHHHHHhCCCC-EEEEeC
Confidence 4688999999877766655557888 999996
No 471
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=33.58 E-value=30 Score=26.25 Aligned_cols=31 Identities=13% Similarity=0.108 Sum_probs=23.9
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||+|.+.+..+..-+..+.+ ++++|.
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~~g~~-V~lie~ 37 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQLGLK-VLAVEA 37 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCe-EEEEeC
Confidence 3588899999987766655545778 999995
No 472
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=33.52 E-value=27 Score=26.55 Aligned_cols=29 Identities=10% Similarity=0.016 Sum_probs=23.2
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEee
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFD 97 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D 97 (135)
.|+=||+|.+.++.++..+-.+.+ ++++|
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~G~~-V~liE 34 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKAKYN-VLMAD 34 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCe-EEEEE
Confidence 577899999987776665555788 99999
No 473
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=33.52 E-value=59 Score=23.46 Aligned_cols=44 Identities=18% Similarity=0.042 Sum_probs=31.7
Q ss_pred CCCcceEEeecCC-CCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCCC
Q 032721 63 FKGVKRLVDVGGS-AGDCLRMILQKHPFICEGINFDL-PEVVAEAPSI 108 (135)
Q Consensus 63 ~~~~~~vvDvGgG-~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~~ 108 (135)
. ...+|+-+|+| .|.++..+++....-+ +++.|. ++-++.+++.
T Consensus 163 ~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~-Vi~~~~~~~~~~~~~~l 208 (343)
T 2dq4_A 163 V-SGKSVLITGAGPIGLMAAMVVRASGAGP-ILVSDPNPYRLAFARPY 208 (343)
T ss_dssp C-TTSCEEEECCSHHHHHHHHHHHHTTCCS-EEEECSCHHHHGGGTTT
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHcCCCE-EEEECCCHHHHHHHHHh
Confidence 5 55788888864 4788888888764337 999997 6677766554
No 474
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=33.49 E-value=38 Score=25.42 Aligned_cols=31 Identities=6% Similarity=0.014 Sum_probs=24.7
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCC--CeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFI--CEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l--~~~~~~D~ 98 (135)
..|+=||+|.+.++.+..-+.-.. + ++++|.
T Consensus 7 ~dV~IIGaG~aGl~aA~~L~~~G~~~~-V~v~E~ 39 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVTAKALLAEKAFDQ-VTLFER 39 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCSE-EEEECS
T ss_pred CEEEEECccHHHHHHHHHHHhcCCCCC-eEEEec
Confidence 578999999988777666665566 7 999996
No 475
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=33.29 E-value=47 Score=24.02 Aligned_cols=43 Identities=26% Similarity=0.224 Sum_probs=30.7
Q ss_pred CCCcceEEeecCC--CCHHHHHHHHHCCCCCeeEEeec-hHHHHhCC
Q 032721 63 FKGVKRLVDVGGS--AGDCLRMILQKHPFICEGINFDL-PEVVAEAP 106 (135)
Q Consensus 63 ~~~~~~vvDvGgG--~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~ 106 (135)
....++|+-+|+| .|..+..+++..+..+ +++.|. ++..+.++
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~-Vi~~~~~~~~~~~~~ 213 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGAT-IIGVDVREEAVEAAK 213 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCE-EEEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCe-EEEEcCCHHHHHHHH
Confidence 5556789989887 5667777887764567 999986 65555543
No 476
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=33.09 E-value=43 Score=24.52 Aligned_cols=44 Identities=20% Similarity=0.050 Sum_probs=30.2
Q ss_pred CCCcceEEeecCCC-CHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC
Q 032721 63 FKGVKRLVDVGGSA-GDCLRMILQKHPFICEGINFDL-PEVVAEAPS 107 (135)
Q Consensus 63 ~~~~~~vvDvGgG~-G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~ 107 (135)
.....+|+-+|+|. |.++..+++....-+ +++.|. ++-++.+++
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~-Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKR-IIAVDLNPDKFEKAKV 235 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSE-EEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCE-EEEEcCCHHHHHHHHH
Confidence 55557888888654 778888888764336 888886 655555543
No 477
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=33.00 E-value=22 Score=26.99 Aligned_cols=30 Identities=10% Similarity=0.129 Sum_probs=23.0
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
.|+=||+|.+.++.++..+.-+.+ ++++|.
T Consensus 5 DVvVIGgG~aGl~aA~~la~~G~~-V~liEk 34 (476)
T 3lad_A 5 DVIVIGAGPGGYVAAIKSAQLGLK-TALIEK 34 (476)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCC-EEEEEC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCE-EEEEeC
Confidence 477799999987776555444678 999996
No 478
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=32.92 E-value=30 Score=25.39 Aligned_cols=42 Identities=21% Similarity=0.211 Sum_probs=31.1
Q ss_pred CcceEEeec--CCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCCC
Q 032721 65 GVKRLVDVG--GSAGDCLRMILQKHPFICEGINFDL-PEVVAEAPS 107 (135)
Q Consensus 65 ~~~~vvDvG--gG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~~ 107 (135)
...+|+=+| |+.|.++..+++.....+ +++.|. ++-++.+++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~-Vi~~~~~~~~~~~~~~ 215 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLT-VIATASRPETQEWVKS 215 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSE-EEEECSSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCE-EEEEeCCHHHHHHHHH
Confidence 456788787 566889999998766677 999998 666665543
No 479
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=32.92 E-value=50 Score=24.17 Aligned_cols=42 Identities=17% Similarity=0.041 Sum_probs=31.7
Q ss_pred CCCcceEEeec--CCCCHHHHHHHHHCCCCCeeEEeec-hHHHHhCC
Q 032721 63 FKGVKRLVDVG--GSAGDCLRMILQKHPFICEGINFDL-PEVVAEAP 106 (135)
Q Consensus 63 ~~~~~~vvDvG--gG~G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~ 106 (135)
.....+|+-+| ||.|.++..+++.. ..+ +++.+. ++-++.++
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~-Vi~~~~~~~~~~~~~ 205 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKA-KCH-VIGTCSSDEKSAFLK 205 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHT-TCE-EEEEESSHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhC-CCE-EEEEECCHHHHHHHH
Confidence 55557899898 68899999999887 447 999987 55555544
No 480
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=32.78 E-value=24 Score=25.58 Aligned_cols=41 Identities=12% Similarity=-0.087 Sum_probs=29.5
Q ss_pred CcceEEeecCCC-CHHHHHHHHHC-CCCCeeEEeec-hHHHHhCC
Q 032721 65 GVKRLVDVGGSA-GDCLRMILQKH-PFICEGINFDL-PEVVAEAP 106 (135)
Q Consensus 65 ~~~~vvDvGgG~-G~~~~~l~~~~-p~l~~~~~~D~-p~~~~~a~ 106 (135)
...+|+-+|+|. |.++..+++.. |+.+ +++.|. ++-.+.++
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~-Vi~~~~~~~~~~~~~ 213 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNIT-IVGISRSKKHRDFAL 213 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCE-EEEECSCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCE-EEEEeCCHHHHHHHH
Confidence 557888888754 77888888765 4678 999986 65555554
No 481
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=32.74 E-value=34 Score=26.40 Aligned_cols=33 Identities=6% Similarity=-0.056 Sum_probs=26.8
Q ss_pred CcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 65 GVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 65 ~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
....|+=||+|...++.++.-+..+++ ++++|.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~-v~vlE~ 43 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVD-VMVLEQ 43 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC-EEEEEC
Confidence 345788899999988777776667888 999996
No 482
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=32.73 E-value=14 Score=27.11 Aligned_cols=11 Identities=36% Similarity=0.525 Sum_probs=9.6
Q ss_pred cceEEeecCCC
Q 032721 66 VKRLVDVGGSA 76 (135)
Q Consensus 66 ~~~vvDvGgG~ 76 (135)
...++|||||+
T Consensus 139 ~~lvvDIGGGS 149 (315)
T 1t6c_A 139 EVCVVDQGGGS 149 (315)
T ss_dssp EEEEEEEETTE
T ss_pred CEEEEEeCCCc
Confidence 46899999997
No 483
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=32.49 E-value=36 Score=25.60 Aligned_cols=34 Identities=9% Similarity=-0.046 Sum_probs=25.4
Q ss_pred CCcceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 64 KGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 64 ~~~~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
.....|+=||+|.+.++.+..-+..+.+ ++++|.
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~-v~v~E~ 47 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTD-AVLLES 47 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCC-EEEECS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCC-EEEEEc
Confidence 3345788999999988887766666778 999986
No 484
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=32.26 E-value=25 Score=25.96 Aligned_cols=30 Identities=17% Similarity=0.057 Sum_probs=22.6
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
.|+=||+|.+.++.+..-+..+.+ ++++|.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~-V~vlE~ 31 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHE-VEVFER 31 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCE-EEEECS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCc-eEEEeC
Confidence 477799998877766555445677 999986
No 485
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=32.24 E-value=28 Score=26.93 Aligned_cols=31 Identities=16% Similarity=0.105 Sum_probs=24.4
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||+|.|.+..++..+.-+++ ++++|.
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~~G~~-V~liEk 63 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQYGKK-VMVLDF 63 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCe-EEEEec
Confidence 3688899999987776666555788 999985
No 486
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=32.19 E-value=31 Score=26.22 Aligned_cols=31 Identities=10% Similarity=0.006 Sum_probs=24.1
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||+|.+.+..++..+.-+.+ ++++|.
T Consensus 21 ~dVvIIGgG~aGl~aA~~la~~G~~-V~liE~ 51 (478)
T 3dk9_A 21 YDYLVIGGGSGGLASARRAAELGAR-AAVVES 51 (478)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCe-EEEEec
Confidence 4588899999987776655555788 999995
No 487
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=32.19 E-value=38 Score=26.71 Aligned_cols=29 Identities=21% Similarity=0.157 Sum_probs=25.1
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEee
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFD 97 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D 97 (135)
-++=||+|+|.+..++..+.-.++ +.++|
T Consensus 44 DviVIG~GpaG~~aA~~aa~~G~k-ValIE 72 (542)
T 4b1b_A 44 DYVVIGGGPGGMASAKEAAAHGAR-VLLFD 72 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCC-EEEEC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCe-EEEEe
Confidence 477799999999888888777888 99998
No 488
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=32.16 E-value=26 Score=19.12 Aligned_cols=35 Identities=26% Similarity=0.467 Sum_probs=25.2
Q ss_pred HHHHCCCCCeeEEeech-HHHHhCCCCCCcEEEecCC
Q 032721 83 ILQKHPFICEGINFDLP-EVVAEAPSIPGVTHIGGDM 118 (135)
Q Consensus 83 l~~~~p~l~~~~~~D~p-~~~~~a~~~~rv~~~~gd~ 118 (135)
+..++|.+. ++...+| ..++..+..+.|.+++-|.
T Consensus 25 i~~~~~~I~-a~~~~lp~~~~~~L~~~p~V~yVE~D~ 60 (65)
T 2z30_B 25 IVYQFKLIP-AVVVDVPANAVGKLKKMPGVEKVEFDH 60 (65)
T ss_dssp EEEECSSSS-EEEEEECGGGHHHHHTSTTEEEEEECC
T ss_pred EEEEecCCc-EEEEEeCHHHHHHHhcCCCceEEecCc
Confidence 345688888 9999984 4455555668888888774
No 489
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=32.14 E-value=41 Score=24.78 Aligned_cols=41 Identities=15% Similarity=-0.040 Sum_probs=29.2
Q ss_pred CCCcceEEeecCCC-CHHHHHHHHHCCCCCeeEEeec-hHHHHhC
Q 032721 63 FKGVKRLVDVGGSA-GDCLRMILQKHPFICEGINFDL-PEVVAEA 105 (135)
Q Consensus 63 ~~~~~~vvDvGgG~-G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a 105 (135)
.....+|+-+|+|. |.++..+++.. ..+ +++.|. ++-++.+
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~-Vi~~~~~~~~~~~a 234 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAM-GAH-VVAFTTSEAKREAA 234 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCE-EEEEESSGGGHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-CCE-EEEEeCCHHHHHHH
Confidence 55557888888764 78888888876 457 888886 5555444
No 490
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=32.10 E-value=29 Score=25.66 Aligned_cols=30 Identities=10% Similarity=-0.116 Sum_probs=22.2
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
.|+=||+|.+.++.+..-+.-+.+ ++++|.
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~-V~vlE~ 32 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKK-VLLLEG 32 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCe-EEEEec
Confidence 477799999877666554444678 999985
No 491
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=32.02 E-value=47 Score=23.28 Aligned_cols=31 Identities=13% Similarity=0.062 Sum_probs=24.2
Q ss_pred ceEEeecCCCCHHHHHHHHHC-CCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKH-PFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~-p~l~~~~~~D~ 98 (135)
..|+=||||...+..++.-+. |+++ ++++|.
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~-V~viEk 71 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQ-VAIIEQ 71 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSC-EEEEES
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCe-EEEEEC
Confidence 358889999977776666655 5889 999996
No 492
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=31.92 E-value=34 Score=25.98 Aligned_cols=31 Identities=13% Similarity=0.115 Sum_probs=24.0
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||+|.+.++.++..+.-+.+ ++++|.
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~~G~~-V~liE~ 36 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQLGFN-TACVEK 36 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCe-EEEEec
Confidence 3588899999987766655555778 999997
No 493
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=31.88 E-value=65 Score=21.55 Aligned_cols=51 Identities=10% Similarity=-0.089 Sum_probs=28.9
Q ss_pred eEEeecCCCCHHHHHHHHHC--CCCCeeEEeec-hHHHHhCCC--CCCcEEEecCCCC
Q 032721 68 RLVDVGGSAGDCLRMILQKH--PFICEGINFDL-PEVVAEAPS--IPGVTHIGGDMFK 120 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~--p~l~~~~~~D~-p~~~~~a~~--~~rv~~~~gd~~~ 120 (135)
+++=.||+ |.++.+++++. .+.+ +++.++ ++.++...+ ..++.++.+|+-+
T Consensus 3 ~vlVTGas-~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~ 58 (230)
T 3guy_A 3 LIVITGAS-SGLGAELAKLYDAEGKA-TYLTGRSESKLSTVTNCLSNNVGYRARDLAS 58 (230)
T ss_dssp CEEEESTT-SHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHTCSSCCCEEECCTTC
T ss_pred EEEEecCC-chHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhhccCeEeecCCC
Confidence 45555654 44444444432 2456 888887 544443322 2578888888854
No 494
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=31.83 E-value=34 Score=25.97 Aligned_cols=31 Identities=10% Similarity=0.117 Sum_probs=24.0
Q ss_pred ceEEeecCCCCHHHHHHHHHCCCCCeeEEeec
Q 032721 67 KRLVDVGGSAGDCLRMILQKHPFICEGINFDL 98 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~ 98 (135)
..|+=||+|.+.+..+...+.-+.+ ++++|.
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~g~~-V~liE~ 37 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQLGFK-TVCIEK 37 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCe-EEEEeC
Confidence 4688899999987766655444778 999997
No 495
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=31.78 E-value=22 Score=26.03 Aligned_cols=38 Identities=11% Similarity=-0.002 Sum_probs=23.6
Q ss_pred HHHHHHHhccccccHHHHhccCCCCCCcceEEeecCCCCH
Q 032721 39 GLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGD 78 (135)
Q Consensus 39 ~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vvDvGgG~G~ 78 (135)
++|.+++.......+...+... .+....|+|||||.+.
T Consensus 25 ~sf~~~~~~~~~~~a~~~A~~~--v~~GAdiIDIg~g~~~ 62 (300)
T 3k13_A 25 RKFLRLVNEKKYDEALSIARQQ--VEDGALVIDVNMDDGL 62 (300)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHH--HHTTCSEEEEECCCTT
T ss_pred HHHHHHHhcCCHHHHHHHHHHH--HHCCCCEEEECCCCCC
Confidence 5677777766544333333332 2344689999998873
No 496
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=31.63 E-value=38 Score=25.44 Aligned_cols=30 Identities=20% Similarity=0.247 Sum_probs=22.6
Q ss_pred eEEeecCCCCHHHH--HHHHHCCCCCeeEEeec
Q 032721 68 RLVDVGGSAGDCLR--MILQKHPFICEGINFDL 98 (135)
Q Consensus 68 ~vvDvGgG~G~~~~--~l~~~~p~l~~~~~~D~ 98 (135)
.|+=||+|.+.+.. .+++..++.+ ++++|.
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~-V~lie~ 33 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAE-IQWYEK 33 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSE-EEEEES
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCe-EEEEEC
Confidence 47789999986544 4555667888 999986
No 497
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=31.63 E-value=47 Score=24.31 Aligned_cols=43 Identities=16% Similarity=0.017 Sum_probs=29.7
Q ss_pred CCCcceEEeecCCC-CHHHHHHHHHCCCCCeeEEeec-hHHHHhCC
Q 032721 63 FKGVKRLVDVGGSA-GDCLRMILQKHPFICEGINFDL-PEVVAEAP 106 (135)
Q Consensus 63 ~~~~~~vvDvGgG~-G~~~~~l~~~~p~l~~~~~~D~-p~~~~~a~ 106 (135)
.....+|+-+|+|. |.++..+++....-+ +++.|. ++-++.++
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~-Vi~~~~~~~~~~~~~ 233 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAAR-IIGVDINKDKFAKAK 233 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSE-EEEECSCGGGHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCe-EEEEcCCHHHHHHHH
Confidence 55557888888654 778888888774336 888886 65555544
No 498
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=31.55 E-value=1.1e+02 Score=20.18 Aligned_cols=51 Identities=10% Similarity=0.085 Sum_probs=30.9
Q ss_pred ceEEeecCCCCHHHHHHHHH----CCCCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC
Q 032721 67 KRLVDVGGSAGDCLRMILQK----HPFICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS 121 (135)
Q Consensus 67 ~~vvDvGgG~G~~~~~l~~~----~p~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~ 121 (135)
.+|+=.| |+|.++.+++++ .+..+ ++++++ +...+.. ..++.++.+|+.+.
T Consensus 5 ~~ilVtG-asG~iG~~l~~~l~~~~~g~~-V~~~~r~~~~~~~~--~~~~~~~~~D~~d~ 60 (253)
T 1xq6_A 5 PTVLVTG-ASGRTGQIVYKKLKEGSDKFV-AKGLVRSAQGKEKI--GGEADVFIGDITDA 60 (253)
T ss_dssp CEEEEES-TTSHHHHHHHHHHHHTTTTCE-EEEEESCHHHHHHT--TCCTTEEECCTTSH
T ss_pred CEEEEEc-CCcHHHHHHHHHHHhcCCCcE-EEEEEcCCCchhhc--CCCeeEEEecCCCH
Confidence 4566555 567666555443 22556 888887 5444433 35677888888653
No 499
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=31.41 E-value=35 Score=25.74 Aligned_cols=31 Identities=13% Similarity=0.056 Sum_probs=23.5
Q ss_pred eEEeecCCCCHHHHHHHHHCCCCCeeEEeech
Q 032721 68 RLVDVGGSAGDCLRMILQKHPFICEGINFDLP 99 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p~l~~~~~~D~p 99 (135)
.|+=||+|.+.+..+...+.-+.+ ++++|..
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~-V~lie~~ 33 (455)
T 2yqu_A 3 DLLVIGAGPGGYVAAIRAAQLGMK-VGVVEKE 33 (455)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-EEEEESS
T ss_pred CEEEECCChhHHHHHHHHHHCCCe-EEEEeCC
Confidence 478899999987766655444778 9999863
No 500
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=31.37 E-value=30 Score=24.59 Aligned_cols=60 Identities=7% Similarity=-0.010 Sum_probs=34.6
Q ss_pred eEEeecCCCCHHHHHHHHHCC--CCCeeEEeec-hHHHHhCCCCCCcEEEecCCCCC------CCCCcEEEe
Q 032721 68 RLVDVGGSAGDCLRMILQKHP--FICEGINFDL-PEVVAEAPSIPGVTHIGGDMFKS------IPAADAIFM 130 (135)
Q Consensus 68 ~vvDvGgG~G~~~~~l~~~~p--~l~~~~~~D~-p~~~~~a~~~~rv~~~~gd~~~~------~p~~D~~~l 130 (135)
+|+=.| |+|.++..++++.- +.+ +++++. +.-.+.. ...+++++.+|+.+. +...|+++-
T Consensus 15 ~ilVtG-atG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~l-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 83 (342)
T 2x4g_A 15 KYAVLG-ATGLLGHHAARAIRAAGHD-LVLIHRPSSQIQRL-AYLEPECRVAEMLDHAGLERALRGLDGVIF 83 (342)
T ss_dssp EEEEES-TTSHHHHHHHHHHHHTTCE-EEEEECTTSCGGGG-GGGCCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred EEEEEC-CCcHHHHHHHHHHHHCCCE-EEEEecChHhhhhh-ccCCeEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 566555 67877777665432 345 888887 3221111 113788999998653 222476654
Done!