Query 032726
Match_columns 135
No_of_seqs 110 out of 373
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 07:57:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032726.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032726hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sre_A PON1, serum paraoxonase 99.3 8.6E-12 2.9E-16 104.4 9.8 92 39-133 38-160 (355)
2 2fp8_A Strictosidine synthase; 99.3 1.6E-11 5.4E-16 96.3 8.5 87 41-129 7-117 (322)
3 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 1.7E-08 6E-13 76.4 9.7 82 44-128 11-106 (314)
4 2p4o_A Hypothetical protein; p 98.8 1.6E-08 5.5E-13 79.1 9.8 82 44-130 26-112 (306)
5 3dr2_A Exported gluconolactona 98.7 8.2E-08 2.8E-12 74.5 10.2 86 42-131 36-124 (305)
6 3e5z_A Putative gluconolactona 98.7 9.5E-08 3.2E-12 72.9 10.0 82 44-129 21-106 (296)
7 1rwi_B Serine/threonine-protei 98.5 5.1E-07 1.7E-11 67.1 8.5 71 53-125 25-98 (270)
8 3a9g_A Putative uncharacterize 98.5 4.3E-07 1.5E-11 74.2 7.8 77 42-123 20-114 (354)
9 2ism_A Putative oxidoreductase 98.4 1.2E-06 3.9E-11 71.2 9.0 77 42-123 22-114 (352)
10 3fvz_A Peptidyl-glycine alpha- 98.4 2.1E-06 7E-11 67.4 9.6 80 45-127 84-179 (329)
11 2dg1_A DRP35, lactonase; beta 98.4 1.8E-06 6.1E-11 66.3 8.7 74 51-126 44-125 (333)
12 2z2n_A Virginiamycin B lyase; 98.3 6.2E-06 2.1E-10 61.3 11.0 77 50-129 13-93 (299)
13 1q7f_A NHL, brain tumor CG1071 98.3 5E-06 1.7E-10 62.6 9.3 74 49-125 161-240 (286)
14 3hrp_A Uncharacterized protein 98.3 7.8E-06 2.7E-10 67.5 11.1 78 50-129 217-304 (409)
15 1rwi_B Serine/threonine-protei 98.3 4.3E-06 1.5E-10 62.0 8.6 72 49-122 64-137 (270)
16 2qc5_A Streptogramin B lactona 98.2 1.1E-05 3.6E-10 60.0 10.2 76 50-128 18-97 (300)
17 2qc5_A Streptogramin B lactona 98.2 1.1E-05 3.7E-10 60.0 10.1 75 51-128 61-139 (300)
18 4hw6_A Hypothetical protein, I 98.2 3.4E-06 1.2E-10 70.7 8.0 72 50-123 137-216 (433)
19 3e5z_A Putative gluconolactona 98.2 1.7E-05 5.7E-10 60.4 10.9 75 52-128 69-167 (296)
20 3fvz_A Peptidyl-glycine alpha- 98.2 1.1E-05 3.9E-10 63.1 10.1 75 49-126 140-231 (329)
21 2z2n_A Virginiamycin B lyase; 98.2 1.2E-05 4.2E-10 59.7 9.7 75 51-128 56-134 (299)
22 1q7f_A NHL, brain tumor CG1071 98.2 7.8E-06 2.7E-10 61.6 8.3 76 48-126 26-112 (286)
23 2fp8_A Strictosidine synthase; 98.1 1.7E-05 5.9E-10 61.7 10.3 70 51-122 125-215 (322)
24 3hrp_A Uncharacterized protein 98.1 2.4E-05 8.2E-10 64.5 10.1 74 54-130 268-362 (409)
25 1pjx_A Dfpase, DIISOPROPYLFLUO 98.0 3.6E-05 1.2E-09 58.0 9.6 74 52-128 71-167 (314)
26 2qe8_A Uncharacterized protein 98.0 1.3E-05 4.3E-10 63.5 7.2 78 43-125 9-105 (343)
27 3hfq_A Uncharacterized protein 98.0 8.2E-05 2.8E-09 57.3 11.3 78 51-130 39-126 (347)
28 3dr2_A Exported gluconolactona 98.0 4.6E-05 1.6E-09 58.9 9.6 74 50-126 186-270 (305)
29 3tc9_A Hypothetical hydrolase; 98.0 1.2E-05 4.1E-10 67.1 6.7 74 50-125 135-216 (430)
30 2ism_A Putative oxidoreductase 97.9 3.3E-05 1.1E-09 62.6 8.6 63 49-115 132-224 (352)
31 1npe_A Nidogen, entactin; glyc 97.9 5.6E-05 1.9E-09 57.2 9.1 78 46-125 73-157 (267)
32 3a9g_A Putative uncharacterize 97.9 7.6E-05 2.6E-09 60.8 10.5 64 49-115 132-219 (354)
33 3v64_C Agrin; beta propeller, 97.9 4.7E-05 1.6E-09 61.5 8.6 78 45-124 152-235 (349)
34 1ijq_A LDL receptor, low-densi 97.9 0.00011 3.8E-09 58.1 10.5 80 45-126 70-155 (316)
35 3g4e_A Regucalcin; six bladed 97.9 7.9E-05 2.7E-09 57.5 9.0 75 52-129 54-145 (297)
36 3v65_B Low-density lipoprotein 97.8 8E-05 2.7E-09 60.9 9.2 78 45-124 195-278 (386)
37 3tc9_A Hypothetical hydrolase; 97.8 0.0001 3.5E-09 61.4 9.9 72 50-123 224-301 (430)
38 3das_A Putative oxidoreductase 97.8 0.00011 3.6E-09 61.2 9.1 80 39-121 20-114 (347)
39 3p5b_L Low density lipoprotein 97.8 8.9E-05 3E-09 61.2 8.5 77 46-124 196-278 (400)
40 2dg1_A DRP35, lactonase; beta 97.8 0.00021 7E-09 54.7 9.8 75 52-128 87-177 (333)
41 2qe8_A Uncharacterized protein 97.7 0.00011 3.7E-09 58.1 8.2 75 52-129 195-285 (343)
42 1ijq_A LDL receptor, low-densi 97.7 0.00018 6.3E-09 56.9 9.0 77 45-123 113-195 (316)
43 3dsm_A Uncharacterized protein 97.7 0.00025 8.6E-09 55.8 9.7 72 52-126 131-216 (328)
44 1npe_A Nidogen, entactin; glyc 97.7 0.00024 8.3E-09 53.6 9.2 78 46-126 161-242 (267)
45 3g4e_A Regucalcin; six bladed 97.7 0.0003 1E-08 54.2 9.8 84 44-131 5-91 (297)
46 1tl2_A L10, protein (tachylect 97.7 7.4E-05 2.5E-09 60.2 6.4 80 38-121 27-114 (236)
47 3sov_A LRP-6, low-density lipo 97.7 0.00019 6.4E-09 57.7 8.8 77 45-123 115-197 (318)
48 3hxj_A Pyrrolo-quinoline quino 97.7 0.00029 1E-08 53.3 9.4 70 54-126 217-287 (330)
49 2g8s_A Glucose/sorbosone dehyd 97.7 8.7E-05 3E-09 60.2 6.8 61 51-114 129-218 (353)
50 3s94_A LRP-6, low-density lipo 97.6 0.00019 6.3E-09 63.1 9.0 79 44-124 427-511 (619)
51 4hw6_A Hypothetical protein, I 97.6 0.00022 7.5E-09 59.7 8.4 72 50-122 226-303 (433)
52 1cru_A Protein (soluble quinop 97.6 0.00039 1.3E-08 58.9 10.0 69 42-113 18-100 (454)
53 4a0p_A LRP6, LRP-6, low-densit 97.6 0.00028 9.7E-09 62.1 9.0 77 45-123 116-197 (628)
54 3dsm_A Uncharacterized protein 97.6 0.00042 1.4E-08 54.5 9.1 73 51-126 83-165 (328)
55 1cru_A Protein (soluble quinop 97.5 0.00015 5.1E-09 61.4 6.9 63 49-114 141-248 (454)
56 3m0c_C LDL receptor, low-densi 97.5 0.0003 1E-08 64.0 9.1 78 45-124 507-590 (791)
57 3das_A Putative oxidoreductase 97.5 0.00029 9.8E-09 58.6 8.2 73 39-114 123-222 (347)
58 2g8s_A Glucose/sorbosone dehyd 97.5 0.00016 5.6E-09 58.6 6.5 68 43-114 10-90 (353)
59 2ghs_A AGR_C_1268P; regucalcin 97.5 0.00059 2E-08 53.6 9.1 84 42-129 39-125 (326)
60 4a0p_A LRP6, LRP-6, low-densit 97.5 0.00046 1.6E-08 60.8 9.3 82 45-128 30-117 (628)
61 3v64_C Agrin; beta propeller, 97.5 0.00059 2E-08 55.0 9.3 80 44-125 108-193 (349)
62 3s94_A LRP-6, low-density lipo 97.5 0.00057 2E-08 60.0 9.8 78 45-124 120-203 (619)
63 3v65_B Low-density lipoprotein 97.5 0.00049 1.7E-08 56.2 8.7 79 45-125 152-236 (386)
64 2p9w_A MAL S 1 allergenic prot 97.4 0.0004 1.4E-08 58.1 7.2 73 52-127 13-117 (334)
65 2p9w_A MAL S 1 allergenic prot 97.4 0.00059 2E-08 57.1 8.0 67 52-122 137-214 (334)
66 3vgz_A Uncharacterized protein 97.3 0.0012 4E-08 50.0 9.0 72 52-125 41-123 (353)
67 2ghs_A AGR_C_1268P; regucalcin 97.3 0.00054 1.9E-08 53.8 7.3 73 52-128 90-174 (326)
68 3sov_A LRP-6, low-density lipo 97.3 0.00078 2.7E-08 54.0 8.2 77 47-125 74-156 (318)
69 3scy_A Hypothetical bacterial 97.3 0.0049 1.7E-07 47.6 12.4 79 50-130 209-301 (361)
70 3p5b_L Low density lipoprotein 97.3 0.0014 4.8E-08 53.9 9.4 80 44-125 151-236 (400)
71 3hxj_A Pyrrolo-quinoline quino 97.2 0.0021 7.1E-08 48.6 9.3 66 56-125 141-206 (330)
72 3sre_A PON1, serum paraoxonase 97.2 0.00092 3.2E-08 55.6 7.7 75 49-127 162-258 (355)
73 3vgz_A Uncharacterized protein 97.2 0.003 1E-07 47.7 9.7 71 54-126 143-219 (353)
74 4a9v_A PHOX; hydrolase, beta-p 97.2 0.0021 7.1E-08 57.5 10.1 78 50-129 382-525 (592)
75 3hfq_A Uncharacterized protein 97.2 0.007 2.4E-07 46.3 11.8 78 51-130 186-280 (347)
76 2p4o_A Hypothetical protein; p 97.1 0.0048 1.6E-07 47.8 10.6 76 49-128 166-247 (306)
77 1n7d_A LDL receptor, low-densi 97.0 0.0015 5.1E-08 58.0 7.5 77 45-123 489-571 (699)
78 3no2_A Uncharacterized protein 97.0 0.0045 1.5E-07 48.1 9.2 69 53-125 126-198 (276)
79 3u4y_A Uncharacterized protein 96.9 0.0072 2.5E-07 45.6 9.7 73 52-126 83-165 (331)
80 3no2_A Uncharacterized protein 96.9 0.0061 2.1E-07 47.3 9.5 71 52-125 165-255 (276)
81 3m0c_C LDL receptor, low-densi 96.9 0.0079 2.7E-07 54.7 11.1 80 44-125 463-548 (791)
82 3u4y_A Uncharacterized protein 96.9 0.006 2.1E-07 46.0 8.7 76 51-128 175-258 (331)
83 1ri6_A Putative isomerase YBHE 96.8 0.041 1.4E-06 41.0 13.1 62 52-115 38-106 (343)
84 1pby_B Quinohemoprotein amine 96.8 0.011 3.8E-07 44.0 9.8 69 53-125 83-166 (337)
85 1tl2_A L10, protein (tachylect 96.8 0.0013 4.3E-08 53.0 4.6 73 41-117 77-156 (236)
86 1n7d_A LDL receptor, low-densi 96.7 0.0022 7.4E-08 56.9 5.8 74 50-125 451-530 (699)
87 3scy_A Hypothetical bacterial 96.7 0.02 6.9E-07 44.1 10.6 75 52-128 259-345 (361)
88 1ri6_A Putative isomerase YBHE 96.6 0.031 1.1E-06 41.6 10.9 76 53-130 232-318 (343)
89 1pby_B Quinohemoprotein amine 96.6 0.025 8.6E-07 42.0 10.3 71 53-125 35-127 (337)
90 1jmx_B Amine dehydrogenase; ox 96.3 0.021 7.1E-07 42.8 8.5 69 53-126 93-179 (349)
91 1jof_A Carboxy-CIS,CIS-muconat 96.2 0.04 1.4E-06 43.1 9.8 54 50-106 38-95 (365)
92 3kya_A Putative phosphatase; s 96.1 0.039 1.3E-06 48.0 10.0 69 51-122 185-277 (496)
93 3kya_A Putative phosphatase; s 96.0 0.0086 2.9E-07 52.1 5.7 73 40-114 127-214 (496)
94 3v9f_A Two-component system se 95.9 0.04 1.4E-06 48.0 9.6 70 55-127 453-529 (781)
95 3bws_A Protein LP49; two-domai 95.8 0.056 1.9E-06 42.2 8.9 59 52-112 345-420 (433)
96 3c75_H MADH, methylamine dehyd 95.7 0.072 2.5E-06 45.1 9.8 77 44-125 113-212 (426)
97 4a2l_A BT_4663, two-component 95.6 0.063 2.2E-06 46.9 9.5 68 56-126 410-484 (795)
98 2oiz_A Aromatic amine dehydrog 95.6 0.13 4.4E-06 40.9 10.6 74 52-129 254-341 (361)
99 1qks_A Cytochrome CD1 nitrite 95.6 0.044 1.5E-06 47.6 8.3 66 52-119 197-270 (567)
100 1jmx_B Amine dehydrogenase; ox 95.6 0.062 2.1E-06 40.2 8.1 69 52-124 255-327 (349)
101 1l0q_A Surface layer protein; 95.5 0.067 2.3E-06 41.1 8.4 72 52-125 32-108 (391)
102 4a9v_A PHOX; hydrolase, beta-p 95.3 0.033 1.1E-06 49.8 6.9 64 50-115 474-553 (592)
103 2mad_H Methylamine dehydrogena 95.3 0.087 3E-06 42.7 8.9 72 53-126 268-354 (373)
104 3zwu_A Alkaline phosphatase PH 95.3 0.14 4.8E-06 45.5 10.8 78 50-129 382-525 (592)
105 1mda_H Methylamine dehydrogena 95.3 0.12 4.1E-06 42.6 9.6 73 44-121 60-156 (368)
106 3qqz_A Putative uncharacterize 95.2 0.11 3.7E-06 41.2 8.9 70 50-122 171-252 (255)
107 3bws_A Protein LP49; two-domai 95.2 0.081 2.8E-06 41.3 8.0 68 52-121 254-332 (433)
108 1jof_A Carboxy-CIS,CIS-muconat 95.2 0.11 3.8E-06 40.6 8.8 72 52-125 145-229 (365)
109 4a2l_A BT_4663, two-component 95.1 0.13 4.3E-06 45.0 9.8 69 56-127 547-619 (795)
110 3odt_A Protein DOA1; ubiquitin 95.1 0.15 5.1E-06 37.3 8.7 66 53-120 227-293 (313)
111 3v9f_A Two-component system se 95.1 0.069 2.4E-06 46.5 7.9 70 55-127 498-573 (781)
112 3sjl_D Methylamine dehydrogena 95.1 0.15 5.1E-06 42.8 9.7 77 44-125 73-172 (386)
113 2oiz_A Aromatic amine dehydrog 94.8 0.049 1.7E-06 43.4 5.9 57 44-106 300-360 (361)
114 2iwa_A Glutamine cyclotransfer 94.8 0.18 6.1E-06 40.2 9.1 79 40-121 9-93 (266)
115 1l0q_A Surface layer protein; 94.8 0.16 5.6E-06 38.9 8.6 68 52-121 116-187 (391)
116 1gxr_A ESG1, transducin-like e 94.3 0.35 1.2E-05 35.6 9.2 62 52-115 184-246 (337)
117 1r5m_A SIR4-interacting protei 94.3 0.27 9.1E-06 37.4 8.7 61 53-115 291-352 (425)
118 2mad_H Methylamine dehydrogena 94.3 0.51 1.7E-05 38.1 10.8 76 45-125 62-159 (373)
119 1nir_A Nitrite reductase; hemo 94.3 0.16 5.4E-06 43.2 8.1 57 53-111 180-244 (543)
120 1gxr_A ESG1, transducin-like e 93.8 0.36 1.2E-05 35.5 8.4 57 52-110 266-323 (337)
121 3c75_H MADH, methylamine dehyd 93.7 0.17 5.8E-06 42.8 7.2 71 53-125 320-405 (426)
122 2iwa_A Glutamine cyclotransfer 93.7 0.77 2.6E-05 36.5 10.7 73 46-122 60-134 (266)
123 3q7m_A Lipoprotein YFGL, BAMB; 93.5 0.33 1.1E-05 37.7 8.0 63 62-126 102-166 (376)
124 4h5i_A Guanine nucleotide-exch 93.4 0.63 2.2E-05 36.6 9.7 63 56-120 138-203 (365)
125 3zwl_B Eukaryotic translation 93.4 0.49 1.7E-05 35.1 8.5 57 55-113 78-135 (369)
126 2pbi_B Guanine nucleotide-bind 93.2 0.72 2.5E-05 35.9 9.7 63 55-119 68-132 (354)
127 1got_B GT-beta; complex (GTP-b 93.1 0.53 1.8E-05 36.2 8.6 63 54-118 58-122 (340)
128 4ery_A WD repeat-containing pr 93.0 0.47 1.6E-05 35.4 8.0 65 53-119 25-91 (312)
129 3qqz_A Putative uncharacterize 93.0 1.5 5.1E-05 34.5 11.3 74 52-128 27-107 (255)
130 3odt_A Protein DOA1; ubiquitin 93.0 0.52 1.8E-05 34.3 8.0 64 53-118 20-84 (313)
131 2wg3_C Hedgehog-interacting pr 92.9 0.16 5.4E-06 43.3 5.9 50 63-113 293-355 (463)
132 3mbr_X Glutamine cyclotransfer 92.9 1.1 3.6E-05 35.5 10.3 72 47-122 60-132 (243)
133 3zwl_B Eukaryotic translation 92.9 0.95 3.3E-05 33.5 9.5 61 53-115 34-96 (369)
134 2wg3_C Hedgehog-interacting pr 92.9 0.11 3.7E-06 44.3 4.7 67 43-113 6-92 (463)
135 3ott_A Two-component system se 92.8 0.2 6.9E-06 43.4 6.4 63 56-122 476-544 (758)
136 2ojh_A Uncharacterized protein 92.8 0.62 2.1E-05 33.2 8.0 67 53-121 43-117 (297)
137 3iz6_a 40S ribosomal protein R 92.7 0.72 2.5E-05 36.1 9.0 59 55-115 70-130 (380)
138 2ymu_A WD-40 repeat protein; u 92.7 0.44 1.5E-05 38.5 7.9 57 56-115 21-79 (577)
139 3b7f_A Glycosyl hydrolase, BNR 92.5 0.31 1.1E-05 38.8 6.7 70 53-123 56-147 (394)
140 3ow8_A WD repeat-containing pr 92.5 0.62 2.1E-05 35.9 8.2 64 55-119 126-190 (321)
141 3b7f_A Glycosyl hydrolase, BNR 92.4 0.33 1.1E-05 38.7 6.8 61 61-123 20-90 (394)
142 3dw8_B Serine/threonine-protei 92.4 0.96 3.3E-05 35.0 9.2 62 57-120 348-443 (447)
143 3nol_A Glutamine cyclotransfer 92.4 0.45 1.5E-05 38.2 7.5 71 53-126 126-205 (262)
144 3ow8_A WD repeat-containing pr 92.4 0.49 1.7E-05 36.5 7.5 57 55-113 252-310 (321)
145 3mmy_A MRNA export factor; mRN 92.4 0.72 2.5E-05 34.2 8.2 63 53-117 88-153 (368)
146 3sjl_D Methylamine dehydrogena 92.3 0.41 1.4E-05 40.1 7.4 68 56-125 284-366 (386)
147 1k8k_C P40, ARP2/3 complex 41 92.2 0.49 1.7E-05 35.5 7.2 59 55-115 12-74 (372)
148 3frx_A Guanine nucleotide-bind 92.0 1 3.6E-05 34.3 8.9 62 54-118 199-262 (319)
149 3ott_A Two-component system se 92.0 0.75 2.6E-05 39.8 9.0 64 56-122 377-447 (758)
150 3q7m_A Lipoprotein YFGL, BAMB; 92.0 0.49 1.7E-05 36.7 7.1 59 62-120 317-375 (376)
151 2ynn_A Coatomer subunit beta'; 91.9 0.64 2.2E-05 35.1 7.5 61 53-115 15-77 (304)
152 1mda_H Methylamine dehydrogena 91.8 0.19 6.5E-06 41.4 4.8 57 44-104 308-367 (368)
153 3amr_A 3-phytase; beta-propell 91.8 0.73 2.5E-05 38.6 8.3 68 51-120 127-207 (355)
154 2ojh_A Uncharacterized protein 91.7 0.56 1.9E-05 33.4 6.7 58 64-122 10-70 (297)
155 1r5m_A SIR4-interacting protei 91.6 0.71 2.4E-05 35.0 7.5 64 54-120 111-177 (425)
156 4ery_A WD repeat-containing pr 91.5 1.5 5.1E-05 32.6 9.1 62 52-115 66-129 (312)
157 2ymu_A WD-40 repeat protein; u 91.5 0.68 2.3E-05 37.4 7.7 67 54-123 470-539 (577)
158 1yfq_A Cell cycle arrest prote 91.5 0.48 1.6E-05 35.2 6.4 62 53-117 58-124 (342)
159 3f3f_A Nucleoporin SEH1; struc 91.4 0.82 2.8E-05 33.2 7.4 26 54-80 217-247 (351)
160 1sq9_A Antiviral protein SKI8; 91.4 0.74 2.5E-05 35.1 7.4 61 52-114 187-254 (397)
161 3vu4_A KMHSV2; beta-propeller 91.3 0.88 3E-05 35.4 7.9 64 53-118 197-265 (355)
162 4gqb_B Methylosome protein 50; 91.3 0.93 3.2E-05 35.6 8.1 62 55-118 86-152 (344)
163 2xzm_R RACK1; ribosome, transl 91.2 1.5 5.1E-05 33.5 9.1 57 55-113 80-138 (343)
164 3o4h_A Acylamino-acid-releasin 91.2 0.44 1.5E-05 39.4 6.4 70 55-126 153-231 (582)
165 3vl1_A 26S proteasome regulato 90.9 1.5 5E-05 33.8 8.8 67 52-120 140-209 (420)
166 3ei3_B DNA damage-binding prot 90.9 1.1 3.9E-05 34.2 8.1 64 52-118 205-276 (383)
167 2aq5_A Coronin-1A; WD40 repeat 90.7 1.2 4E-05 34.7 8.2 67 52-120 132-204 (402)
168 3f3f_A Nucleoporin SEH1; struc 90.6 1.7 5.8E-05 31.5 8.5 61 53-115 13-81 (351)
169 1yfq_A Cell cycle arrest prote 90.6 0.73 2.5E-05 34.2 6.6 65 55-121 15-86 (342)
170 3ei3_B DNA damage-binding prot 90.5 1.5 5.1E-05 33.5 8.5 60 54-115 166-227 (383)
171 3frx_A Guanine nucleotide-bind 90.5 1.3 4.6E-05 33.6 8.2 59 55-115 69-129 (319)
172 4h5i_A Guanine nucleotide-exch 90.5 0.84 2.9E-05 35.8 7.2 55 54-110 272-329 (365)
173 3nol_A Glutamine cyclotransfer 90.5 2.4 8.2E-05 33.9 9.9 65 54-122 89-154 (262)
174 3nok_A Glutaminyl cyclase; bet 90.3 3.1 0.00011 33.5 10.5 66 53-122 97-163 (268)
175 2hz6_A Endoplasmic reticulum t 90.3 0.58 2E-05 37.3 6.2 61 62-124 8-70 (369)
176 1k8k_C P40, ARP2/3 complex 41 90.2 1.8 6E-05 32.4 8.4 66 53-120 204-271 (372)
177 4aow_A Guanine nucleotide-bind 90.1 2.5 8.4E-05 31.1 9.1 56 55-112 219-275 (340)
178 3k26_A Polycomb protein EED; W 90.1 1.4 4.7E-05 32.7 7.7 62 53-116 117-184 (366)
179 1got_B GT-beta; complex (GTP-b 89.9 1.1 3.8E-05 34.3 7.3 57 59-116 150-207 (340)
180 3dwl_C Actin-related protein 2 89.9 0.63 2.1E-05 35.4 5.8 67 54-122 208-280 (377)
181 3pe7_A Oligogalacturonate lyas 89.9 2.4 8.3E-05 32.2 9.2 68 59-126 42-115 (388)
182 2be1_A Serine/threonine-protei 89.8 0.51 1.7E-05 38.9 5.6 56 63-119 10-81 (339)
183 2pm9_A Protein WEB1, protein t 89.8 3 0.0001 31.8 9.6 64 52-117 263-330 (416)
184 1erj_A Transcriptional repress 89.6 1.5 5.2E-05 34.4 8.0 60 56-117 128-189 (393)
185 4gq1_A NUP37; propeller, trans 89.5 0.93 3.2E-05 35.8 6.8 55 66-120 332-386 (393)
186 3mmy_A MRNA export factor; mRN 89.5 1.9 6.5E-05 31.9 8.1 64 53-118 41-111 (368)
187 2aq5_A Coronin-1A; WD40 repeat 89.4 2 6.8E-05 33.3 8.5 57 53-111 178-238 (402)
188 2hqs_A Protein TOLB; TOLB, PAL 89.2 1.2 4.2E-05 35.7 7.4 67 54-122 225-299 (415)
189 2hqs_A Protein TOLB; TOLB, PAL 89.0 2.8 9.5E-05 33.6 9.3 71 54-126 181-260 (415)
190 1sq9_A Antiviral protein SKI8; 88.9 2.2 7.6E-05 32.3 8.3 51 54-105 294-366 (397)
191 1vyh_C Platelet-activating fac 88.9 1.4 4.6E-05 35.0 7.3 55 55-111 342-398 (410)
192 4a11_B DNA excision repair pro 88.6 1.9 6.4E-05 32.5 7.6 69 45-115 37-122 (408)
193 2xbg_A YCF48-like protein; pho 88.6 2.1 7.3E-05 33.4 8.2 69 54-123 207-279 (327)
194 2xzm_R RACK1; ribosome, transl 88.6 1.9 6.5E-05 32.9 7.8 65 54-120 216-282 (343)
195 1erj_A Transcriptional repress 88.5 2.3 7.9E-05 33.3 8.4 59 55-115 169-229 (393)
196 2pbi_B Guanine nucleotide-bind 88.3 1.6 5.3E-05 33.9 7.2 60 52-113 285-346 (354)
197 4g56_B MGC81050 protein; prote 88.3 1.3 4.4E-05 34.6 6.7 63 54-118 97-164 (357)
198 3k26_A Polycomb protein EED; W 88.2 2.2 7.7E-05 31.5 7.7 59 55-115 73-138 (366)
199 3dw8_B Serine/threonine-protei 88.1 3.3 0.00011 31.9 8.9 26 56-82 33-59 (447)
200 3i2n_A WD repeat-containing pr 88.1 1.2 4.1E-05 33.0 6.2 55 53-109 261-337 (357)
201 3mbr_X Glutamine cyclotransfer 88.1 1.6 5.4E-05 34.5 7.1 72 53-127 104-184 (243)
202 3i2n_A WD repeat-containing pr 87.9 2.4 8.1E-05 31.4 7.7 54 61-115 177-234 (357)
203 4aow_A Guanine nucleotide-bind 87.9 2.1 7.2E-05 31.5 7.4 62 55-118 42-111 (340)
204 2ece_A 462AA long hypothetical 87.7 4.9 0.00017 34.8 10.5 86 44-131 242-362 (462)
205 3iz6_a 40S ribosomal protein R 87.7 2.7 9.3E-05 32.7 8.3 60 55-116 302-367 (380)
206 3nok_A Glutaminyl cyclase; bet 87.5 1.2 4.3E-05 35.8 6.3 71 53-126 135-214 (268)
207 2ecf_A Dipeptidyl peptidase IV 87.2 3.6 0.00012 34.6 9.2 34 52-86 37-77 (741)
208 3mkq_A Coatomer beta'-subunit; 87.2 1.8 6E-05 36.6 7.3 62 52-115 14-77 (814)
209 3fm0_A Protein CIAO1; WDR39,SG 87.1 3.2 0.00011 31.9 8.2 55 54-110 64-122 (345)
210 2vdu_B TRNA (guanine-N(7)-)-me 86.8 2.6 9E-05 33.4 7.8 64 54-119 105-176 (450)
211 1vyh_C Platelet-activating fac 86.5 1.6 5.4E-05 34.6 6.3 57 55-113 112-170 (410)
212 3dwl_C Actin-related protein 2 86.4 0.81 2.8E-05 34.8 4.4 61 55-117 59-124 (377)
213 4g56_B MGC81050 protein; prote 86.2 2.4 8.1E-05 33.0 7.2 53 55-110 273-329 (357)
214 1nir_A Nitrite reductase; hemo 86.1 3 0.0001 35.2 8.2 59 52-112 222-299 (543)
215 2hes_X YDR267CP; beta-propelle 86.0 3.7 0.00013 31.3 8.0 61 56-118 19-83 (330)
216 3jrp_A Fusion protein of prote 85.8 1.9 6.4E-05 32.1 6.1 72 54-127 209-293 (379)
217 3lrv_A PRE-mRNA-splicing facto 85.6 4.7 0.00016 30.6 8.4 60 55-115 129-192 (343)
218 2ynn_A Coatomer subunit beta'; 85.6 3.5 0.00012 30.9 7.6 58 56-115 60-119 (304)
219 3amr_A 3-phytase; beta-propell 85.4 1.1 3.6E-05 37.6 5.0 34 44-80 174-208 (355)
220 2hes_X YDR267CP; beta-propelle 85.3 3.5 0.00012 31.4 7.5 61 55-117 111-177 (330)
221 1k32_A Tricorn protease; prote 84.9 6.3 0.00022 35.4 10.1 56 53-110 380-437 (1045)
222 4aez_A CDC20, WD repeat-contai 84.9 4.4 0.00015 31.5 8.1 63 53-117 305-373 (401)
223 3fm0_A Protein CIAO1; WDR39,SG 84.8 3.1 0.0001 32.0 7.1 62 55-118 154-219 (345)
224 3o4h_A Acylamino-acid-releasin 84.8 1.1 3.8E-05 36.9 4.8 59 55-115 198-267 (582)
225 2ecf_A Dipeptidyl peptidase IV 84.6 2.6 8.8E-05 35.5 7.0 65 54-121 111-179 (741)
226 1pgu_A Actin interacting prote 84.5 4.5 0.00015 32.5 8.2 61 54-115 163-229 (615)
227 2xbg_A YCF48-like protein; pho 84.4 2.4 8.1E-05 33.1 6.4 65 56-123 84-151 (327)
228 1nr0_A Actin interacting prote 84.4 3.2 0.00011 34.8 7.6 60 54-115 193-261 (611)
229 1xfd_A DIP, dipeptidyl aminope 84.2 4.6 0.00016 33.8 8.4 72 53-126 62-147 (723)
230 4gqb_B Methylosome protein 50; 84.0 3.4 0.00012 32.3 7.2 53 55-109 261-316 (344)
231 2pm9_A Protein WEB1, protein t 83.6 3.8 0.00013 31.2 7.1 62 55-118 71-139 (416)
232 3dm0_A Maltose-binding peripla 83.6 5.1 0.00017 33.9 8.5 56 54-111 433-490 (694)
233 3azo_A Aminopeptidase; POP fam 83.4 6.6 0.00023 32.6 9.0 71 55-127 191-279 (662)
234 4a11_B DNA excision repair pro 83.3 4 0.00014 30.6 7.0 60 54-115 189-267 (408)
235 3vl1_A 26S proteasome regulato 83.2 4.6 0.00016 30.9 7.4 58 60-118 343-413 (420)
236 2j04_A TAU60, YPL007P, hypothe 83.2 4.3 0.00015 36.1 8.1 66 54-122 132-210 (588)
237 3lrv_A PRE-mRNA-splicing facto 82.9 3 0.0001 31.7 6.2 56 53-110 172-231 (343)
238 2vdu_B TRNA (guanine-N(7)-)-me 82.8 2.3 7.7E-05 33.8 5.7 60 52-113 150-219 (450)
239 2ece_A 462AA long hypothetical 82.8 6.2 0.00021 34.1 8.8 58 52-111 321-399 (462)
240 4e54_B DNA damage-binding prot 82.7 7.2 0.00025 30.8 8.7 60 56-116 169-232 (435)
241 1pgu_A Actin interacting prote 82.7 4.1 0.00014 32.7 7.2 58 52-111 489-559 (615)
242 1qks_A Cytochrome CD1 nitrite 82.6 4.4 0.00015 35.0 7.8 61 60-121 163-225 (567)
243 2ovr_B FBW7, F-BOX/WD repeat p 82.6 4.5 0.00015 31.8 7.3 57 56-115 367-429 (445)
244 1fwx_A Nitrous oxide reductase 82.4 1.1 3.8E-05 39.9 4.1 64 44-111 271-348 (595)
245 1nr0_A Actin interacting prote 82.1 4.7 0.00016 33.8 7.6 56 53-110 450-508 (611)
246 3sfz_A APAF-1, apoptotic pepti 82.1 4.1 0.00014 36.5 7.7 59 55-115 619-679 (1249)
247 2pm7_B Protein transport prote 81.8 5.6 0.00019 29.7 7.3 54 55-110 13-72 (297)
248 2z3z_A Dipeptidyl aminopeptida 80.9 8.9 0.00031 32.1 8.9 66 52-120 82-147 (706)
249 3dm0_A Maltose-binding peripla 80.7 5.2 0.00018 33.8 7.5 65 55-121 565-630 (694)
250 3pe7_A Oligogalacturonate lyas 80.7 15 0.00052 27.7 9.5 53 56-109 85-140 (388)
251 2xyi_A Probable histone-bindin 80.6 3.8 0.00013 32.5 6.3 64 53-118 323-404 (430)
252 4aez_A CDC20, WD repeat-contai 80.5 7.1 0.00024 30.3 7.7 54 63-116 103-157 (401)
253 3bg1_A Protein SEC13 homolog; 80.4 5.8 0.0002 29.9 7.1 70 55-126 216-298 (316)
254 3gre_A Serine/threonine-protei 80.3 7.3 0.00025 30.2 7.7 52 63-115 181-236 (437)
255 3mkq_A Coatomer beta'-subunit; 80.3 14 0.00046 31.2 9.9 62 52-115 185-250 (814)
256 3jrp_A Fusion protein of prote 79.8 5.7 0.0002 29.4 6.7 59 55-115 59-125 (379)
257 3gre_A Serine/threonine-protei 79.7 4.7 0.00016 31.3 6.4 60 53-115 65-133 (437)
258 2xyi_A Probable histone-bindin 79.5 14 0.00048 29.1 9.3 63 51-115 231-300 (430)
259 2gop_A Trilobed protease; beta 79.1 17 0.00057 27.0 9.2 52 73-129 152-214 (347)
260 2pm7_B Protein transport prote 78.9 5.2 0.00018 29.9 6.3 71 55-127 208-291 (297)
261 3v7d_B Cell division control p 78.4 6.4 0.00022 30.8 6.9 56 53-110 164-222 (464)
262 1flg_A Protein (quinoprotein e 77.6 5.6 0.00019 34.2 6.9 53 61-115 495-552 (582)
263 3c5m_A Oligogalacturonate lyas 77.2 16 0.00055 27.4 8.6 74 54-128 38-117 (396)
264 3jro_A Fusion protein of prote 77.1 4.6 0.00016 35.0 6.2 62 54-117 207-278 (753)
265 4e54_B DNA damage-binding prot 77.1 4.1 0.00014 32.3 5.4 54 55-110 213-268 (435)
266 3sfz_A APAF-1, apoptotic pepti 76.5 5.9 0.0002 35.5 6.9 59 53-113 1046-1105(1249)
267 4ggc_A P55CDC, cell division c 76.4 15 0.00053 26.4 8.1 28 56-84 72-100 (318)
268 2hz6_A Endoplasmic reticulum t 75.9 2.4 8.1E-05 33.7 3.8 62 62-125 129-195 (369)
269 3jro_A Fusion protein of prote 75.8 9.4 0.00032 33.1 7.8 59 55-115 13-77 (753)
270 3v7d_B Cell division control p 75.5 18 0.00063 28.1 8.8 62 56-120 357-418 (464)
271 1xfd_A DIP, dipeptidyl aminope 75.4 2.9 9.8E-05 35.0 4.3 55 54-110 19-77 (723)
272 3azo_A Aminopeptidase; POP fam 75.3 7.4 0.00025 32.3 6.8 54 54-109 132-203 (662)
273 3ol2_B Plexin-B1; beta-propell 73.0 18 0.00062 31.5 8.9 63 56-120 391-462 (528)
274 2ad6_A Methanol dehydrogenase 72.6 7.7 0.00026 33.1 6.4 50 60-111 472-524 (571)
275 3q6k_A 43.2 kDa salivary prote 71.8 12 0.0004 31.3 7.2 55 59-114 281-344 (381)
276 3c5m_A Oligogalacturonate lyas 70.6 26 0.00091 26.1 8.4 70 57-128 287-390 (396)
277 2ad6_A Methanol dehydrogenase 70.4 13 0.00045 31.7 7.4 61 63-125 115-188 (571)
278 2oit_A Nucleoporin 214KDA; NH2 70.3 14 0.00047 30.0 7.1 67 53-122 151-222 (434)
279 1yiq_A Quinohemoprotein alcoho 69.7 10 0.00035 33.1 6.6 49 60-112 483-536 (689)
280 3nvq_A Semaphorin-7A; beta-pro 69.5 16 0.00055 32.4 7.9 54 66-120 383-445 (590)
281 3al9_A Plexin-A2; beta-propell 68.9 15 0.00051 31.9 7.4 55 65-120 415-477 (539)
282 1kb0_A Quinohemoprotein alcoho 68.2 23 0.00078 30.8 8.5 62 62-125 76-150 (677)
283 3bg1_A Protein SEC13 homolog; 67.5 25 0.00085 26.4 7.7 61 56-118 62-130 (316)
284 2oaj_A Protein SNI1; WD40 repe 67.2 21 0.00072 32.0 8.3 55 55-113 62-119 (902)
285 4gga_A P55CDC, cell division c 67.1 20 0.00068 28.0 7.3 63 54-118 323-389 (420)
286 1kv9_A Type II quinohemoprotei 67.0 30 0.001 30.0 9.0 62 62-125 65-139 (668)
287 2oaj_A Protein SNI1; WD40 repe 65.8 19 0.00066 32.3 7.7 66 52-120 18-85 (902)
288 3oky_A Plexin-A2; transmembran 65.7 26 0.00089 31.5 8.5 63 56-120 403-476 (681)
289 1z68_A Fibroblast activation p 65.1 10 0.00035 31.8 5.5 53 55-109 19-75 (719)
290 4fww_A Macrophage-stimulating 64.9 13 0.00045 31.6 6.2 62 55-119 408-479 (527)
291 4gz8_A Semaphorin-3A; multi-do 64.7 17 0.00059 32.6 7.2 54 66-120 432-496 (667)
292 1olz_A Semaphorin 4D; developm 64.7 30 0.001 30.8 8.7 55 65-120 417-478 (663)
293 2be1_A Serine/threonine-protei 64.3 7.3 0.00025 31.9 4.3 33 62-95 110-142 (339)
294 2gop_A Trilobed protease; beta 63.7 41 0.0014 24.8 8.2 54 54-110 61-121 (347)
295 1fwx_A Nitrous oxide reductase 63.0 28 0.00095 30.9 8.1 65 46-112 128-213 (595)
296 1kb0_A Quinohemoprotein alcoho 62.7 31 0.0011 30.0 8.3 52 73-125 457-510 (677)
297 2z3z_A Dipeptidyl aminopeptida 62.1 19 0.00065 30.1 6.6 56 53-110 122-197 (706)
298 3oky_B Putative uncharacterize 61.1 25 0.00086 31.0 7.4 55 65-120 422-496 (565)
299 1flg_A Protein (quinoprotein e 61.0 39 0.0013 28.9 8.5 70 53-125 59-139 (582)
300 4gga_A P55CDC, cell division c 61.0 33 0.0011 26.6 7.5 27 56-83 152-179 (420)
301 4ggc_A P55CDC, cell division c 60.9 43 0.0015 24.0 8.3 59 60-119 33-93 (318)
302 1yiq_A Quinohemoprotein alcoho 60.4 39 0.0013 29.4 8.5 27 62-89 69-95 (689)
303 1p22_A F-BOX/WD-repeat protein 59.8 39 0.0013 26.3 7.7 25 60-84 139-164 (435)
304 4gq1_A NUP37; propeller, trans 58.8 20 0.00069 27.9 5.9 55 63-118 155-212 (393)
305 2j04_B YDR362CP, TAU91; beta p 58.3 31 0.0011 29.0 7.4 28 55-83 270-297 (524)
306 1q47_A Semaphorin 3A; beta pro 58.3 27 0.00092 30.0 7.0 54 66-120 424-488 (495)
307 1w6s_A Methanol dehydrogenase 58.0 25 0.00086 30.5 6.9 49 61-111 482-533 (599)
308 1kv9_A Type II quinohemoprotei 57.9 29 0.00098 30.1 7.2 22 63-84 117-138 (668)
309 3vu4_A KMHSV2; beta-propeller 57.5 18 0.00061 27.8 5.3 46 69-115 155-217 (355)
310 1w6s_A Methanol dehydrogenase 57.1 65 0.0022 27.9 9.3 63 62-125 61-143 (599)
311 1z68_A Fibroblast activation p 55.8 28 0.00095 29.2 6.6 56 53-110 111-185 (719)
312 4a5s_A Dipeptidyl peptidase 4 55.5 21 0.00073 30.6 5.9 64 55-120 65-138 (740)
313 2cn3_A Xyloglucanase, beta-1,4 53.1 41 0.0014 29.5 7.4 67 56-123 27-112 (737)
314 1k32_A Tricorn protease; prote 53.0 34 0.0012 30.6 7.0 56 55-112 424-490 (1045)
315 1sqj_A OXG-RCBH, oligoxylogluc 52.6 28 0.00095 31.0 6.3 67 56-123 19-101 (789)
316 3nvn_B Plexin-C1; beta-propell 51.4 52 0.0018 28.6 7.6 55 65-120 355-417 (476)
317 1p22_A F-BOX/WD-repeat protein 49.0 46 0.0016 25.9 6.5 16 65-80 308-323 (435)
318 3mez_A Mannose-specific lectin 47.1 42 0.0014 22.5 5.3 17 97-113 52-68 (111)
319 1suu_A DNA gyrase subunit A; t 46.6 41 0.0014 26.5 5.9 70 55-129 2-74 (312)
320 2ovr_B FBW7, F-BOX/WD repeat p 46.2 61 0.0021 25.1 6.8 16 65-80 211-226 (445)
321 2oit_A Nucleoporin 214KDA; NH2 44.5 13 0.00043 30.2 2.6 65 54-120 95-178 (434)
322 3q6k_A 43.2 kDa salivary prote 44.2 1.4E+02 0.0046 24.8 9.6 70 52-123 220-306 (381)
323 3zwu_A Alkaline phosphatase PH 43.7 52 0.0018 29.0 6.6 59 50-110 474-548 (592)
324 3a0f_A Xyloglucanase; beta-pro 42.2 1.3E+02 0.0045 26.4 9.0 70 52-123 75-164 (763)
325 2xdw_A Prolyl endopeptidase; a 40.6 1.3E+02 0.0045 25.4 8.5 53 56-110 129-188 (710)
326 2j04_B YDR362CP, TAU91; beta p 37.7 41 0.0014 28.2 4.9 62 56-120 448-513 (524)
327 1suu_A DNA gyrase subunit A; t 37.2 1.3E+02 0.0044 23.6 7.5 66 61-128 56-129 (312)
328 1b2p_A Protein (lectin); manno 37.1 95 0.0033 21.0 7.2 48 61-112 27-78 (119)
329 2j04_A TAU60, YPL007P, hypothe 35.6 77 0.0026 28.1 6.4 59 55-115 89-151 (588)
330 3hx6_A Type 4 fimbrial biogene 35.6 47 0.0016 29.4 5.0 29 55-83 252-285 (570)
331 1zi0_A DNA gyrase subunit A; b 35.1 1.1E+02 0.0037 24.0 6.7 62 65-129 5-69 (307)
332 3mez_B Mannose-specific lectin 34.7 1E+02 0.0035 20.6 6.5 17 97-113 59-75 (113)
333 3l6v_A GYRA, DNA gyrase subuni 34.3 62 0.0021 26.5 5.3 63 63-128 7-72 (370)
334 2w18_A PALB2, fancn, partner a 33.4 1.5E+02 0.0052 24.4 7.5 46 65-111 297-344 (356)
335 4h3o_A Lectin; cadmium, plant 33.0 48 0.0016 22.0 3.7 19 97-115 53-71 (105)
336 4ftd_A Uncharacterized protein 32.4 1.1E+02 0.0038 26.5 6.7 55 56-112 193-265 (453)
337 1zvt_A Topoisomerase IV subuni 32.0 1.5E+02 0.0052 22.7 7.0 64 61-128 42-110 (256)
338 2w18_A PALB2, fancn, partner a 30.0 1.6E+02 0.0055 24.3 7.1 45 65-110 195-243 (356)
339 2bkl_A Prolyl endopeptidase; m 28.9 2.2E+02 0.0075 23.9 8.0 72 55-128 171-267 (695)
340 3dzw_A Agglutinin; lectin, man 28.4 1.3E+02 0.0044 19.8 5.7 17 97-113 52-68 (109)
341 3d3l_A Arachidonate 12-lipoxyg 27.4 61 0.0021 28.5 4.3 22 112-133 144-165 (541)
342 2cn3_A Xyloglucanase, beta-1,4 25.2 75 0.0026 27.8 4.5 63 59-123 571-639 (737)
343 3dmo_A Cytidine deaminase; str 24.8 42 0.0014 24.3 2.4 13 59-71 38-50 (138)
344 2dpf_A Curculin; sweet taste, 24.8 1.5E+02 0.0053 19.5 5.2 15 97-111 53-67 (115)
345 1xip_A Nucleoporin NUP159; bet 24.4 1.2E+02 0.0039 25.0 5.3 52 56-110 167-230 (388)
346 3s25_A Hypothetical 7-bladed b 24.3 2.3E+02 0.0079 21.9 6.8 47 73-124 88-139 (302)
347 1wp5_A Topoisomerase IV; broke 23.7 99 0.0034 24.6 4.6 61 63-128 106-170 (323)
348 4a5s_A Dipeptidyl peptidase 4 23.4 3E+02 0.01 23.3 7.9 51 59-110 118-187 (740)
349 3f6k_A Sortilin; protein sorti 23.2 2.2E+02 0.0074 25.5 7.1 67 55-123 93-169 (685)
350 1sqj_A OXG-RCBH, oligoxylogluc 23.2 1.5E+02 0.0051 26.2 6.1 70 53-123 65-152 (789)
351 3dm8_A Uncharacterized protein 21.7 19 0.00065 24.5 -0.1 29 70-99 111-139 (143)
352 3a0c_A Mannose/sialic acid-bin 21.1 1.8E+02 0.0063 19.0 7.6 16 97-112 53-68 (110)
353 3uc1_A DNA gyrase subunit A; D 20.9 2.7E+02 0.0093 22.0 6.8 66 61-128 155-224 (327)
354 2d30_A Cytidine deaminase; pur 20.5 59 0.002 23.4 2.4 13 59-71 39-51 (141)
355 3oj6_A Blasticidin-S deaminase 20.3 58 0.002 24.1 2.4 19 54-72 52-70 (158)
356 3mpz_A Cytidine deaminase; ssg 20.1 59 0.002 23.9 2.4 13 59-71 52-64 (150)
No 1
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.30 E-value=8.6e-12 Score=104.35 Aligned_cols=92 Identities=10% Similarity=0.165 Sum_probs=71.5
Q ss_pred ccccceEeccCCcCCCceeeeeeCCCcEEEEe-------------cCcEEEEEEcCC--CceeEEeeec-------CCCC
Q 032726 39 SMKDLIKLGEGCVSHPEDVSVVVRKGALYTAT-------------NDGWVKYFILHN--ETLVNWKHID-------SQSL 96 (135)
Q Consensus 39 ~L~~~e~l~~g~~~GPEdi~avd~~G~lYTg~-------------~dG~I~ri~~~~--~~~~~~~~t~-------GRPp 96 (135)
.+.+.++|. +...||||+ +++++|.+|+++ ++|+|++++..+ .+.+.++.++ +||
T Consensus 38 ~~~~C~~i~-~~~~G~EDi-~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~P- 114 (355)
T 3sre_A 38 ELPNCNLVK-GIDNGSEDL-EILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNP- 114 (355)
T ss_dssp CCSCEEECT-TCCSCCCEE-EECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCE-
T ss_pred CCCCCEEeC-CCCCCccee-EEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceee-
Confidence 345788874 335799999 699999999998 899999998742 3456666666 599
Q ss_pred CceeECC--CC--CEEEEeCCCc-----eEEeCCCCeEEEEEEEee
Q 032726 97 LGLTTTK--EG--DVVICDSKKV-----RQHTNSQALIIVCVCVYS 133 (135)
Q Consensus 97 LGl~fd~--~G--~LiVaDa~~G-----Ll~V~~~G~v~vl~~~~~ 133 (135)
+||.+.. +| +|||||+.++ ++++++++...+++.-+.
T Consensus 115 hGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 115 HGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp EEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred eeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 9999954 45 6999999986 999999887777776543
No 2
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.26 E-value=1.6e-11 Score=96.35 Aligned_cols=87 Identities=14% Similarity=0.120 Sum_probs=68.4
Q ss_pred ccceEecc-CCcCCCceeeeeeCCCc-EEEEecCcEEEEEEcCCCceeEEe--------------------eecCCCCCc
Q 032726 41 KDLIKLGE-GCVSHPEDVSVVVRKGA-LYTATNDGWVKYFILHNETLVNWK--------------------HIDSQSLLG 98 (135)
Q Consensus 41 ~~~e~l~~-g~~~GPEdi~avd~~G~-lYTg~~dG~I~ri~~~~~~~~~~~--------------------~t~GRPpLG 98 (135)
...+.+.. |++.+||++ ++|++|+ +|+++.+|+|+|++..++..+.|. ..+++| .|
T Consensus 7 ~~~~~i~~~g~~~~p~~i-~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p-~g 84 (322)
T 2fp8_A 7 PILKEILIEAPSYAPNSF-TFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRT-YD 84 (322)
T ss_dssp ---CEEEEECSSSCCCCE-ECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCE-EE
T ss_pred CccceeecCCccCCceEE-EEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCC-ce
Confidence 34455544 568899999 7999998 999999999999976444555554 235788 99
Q ss_pred eeECC-CCCEEEEeCCCceEEeCCC-CeEEEEE
Q 032726 99 LTTTK-EGDVVICDSKKVRQHTNSQ-ALIIVCV 129 (135)
Q Consensus 99 l~fd~-~G~LiVaDa~~GLl~V~~~-G~v~vl~ 129 (135)
|++|+ +|+|||||...|+++++++ |.+++++
T Consensus 85 i~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~ 117 (322)
T 2fp8_A 85 ISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLA 117 (322)
T ss_dssp EEEETTTTEEEEEETTTEEEEECTTCEECEEEE
T ss_pred EEEcCCCCcEEEEECCCCEEEEeCCCCEEEEec
Confidence 99996 8999999999999999987 6777765
No 3
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.84 E-value=1.7e-08 Score=76.42 Aligned_cols=82 Identities=12% Similarity=0.128 Sum_probs=66.9
Q ss_pred eEeccCCcCCCceeeeeeCCCcEEEE--------ecCcEEEEEEcCCCceeEEee-----ecCCCCCceeECCC-CCEEE
Q 032726 44 IKLGEGCVSHPEDVSVVVRKGALYTA--------TNDGWVKYFILHNETLVNWKH-----IDSQSLLGLTTTKE-GDVVI 109 (135)
Q Consensus 44 e~l~~g~~~GPEdi~avd~~G~lYTg--------~~dG~I~ri~~~~~~~~~~~~-----t~GRPpLGl~fd~~-G~LiV 109 (135)
+.+..+ +..||++ ++|++|++|.+ ..+|+|.+++..++....+.. .++.| .++.+|++ |+|||
T Consensus 11 ~~~~~~-~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~-~~i~~~~~~g~l~v 87 (314)
T 1pjx_A 11 TKVTED-IPGAEGP-VFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIP-AGCQCDRDANQLFV 87 (314)
T ss_dssp EEEECC-CTTCEEE-EECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCE-EEEEECSSSSEEEE
T ss_pred hhhhcc-CCCccCc-eECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCC-ceEEEecCCCcEEE
Confidence 445444 7899999 79999999987 789999999765666555544 45778 99999999 99999
Q ss_pred EeCCCceEEeCCCCeEEEE
Q 032726 110 CDSKKVRQHTNSQALIIVC 128 (135)
Q Consensus 110 aDa~~GLl~V~~~G~v~vl 128 (135)
++...|+.+++++|+++.+
T Consensus 88 ~~~~~~l~~~d~~g~~~~~ 106 (314)
T 1pjx_A 88 ADMRLGLLVVQTDGTFEEI 106 (314)
T ss_dssp EETTTEEEEEETTSCEEEC
T ss_pred EECCCCEEEEeCCCCEEEE
Confidence 9998899999988887654
No 4
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.84 E-value=1.6e-08 Score=79.12 Aligned_cols=82 Identities=12% Similarity=0.150 Sum_probs=65.7
Q ss_pred eEeccCCcCCCceeeeeeCCCcEEEEe-cCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCC-c--eEEe
Q 032726 44 IKLGEGCVSHPEDVSVVVRKGALYTAT-NDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKK-V--RQHT 119 (135)
Q Consensus 44 e~l~~g~~~GPEdi~avd~~G~lYTg~-~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~-G--Ll~V 119 (135)
..+..+ ..||++ ++|++|++|... .+|+|+|+++ ++....+...+++| .||+++++|+|||||... + ++++
T Consensus 26 ~~~p~~--~~pegi-a~~~~g~lyv~d~~~~~I~~~d~-~g~~~~~~~~~~~p-~gia~~~dG~l~vad~~~~~~~v~~~ 100 (306)
T 2p4o_A 26 TSFPVN--TFLENL-ASAPDGTIFVTNHEVGEIVSITP-DGNQQIHATVEGKV-SGLAFTSNGDLVATGWNADSIPVVSL 100 (306)
T ss_dssp EEECTT--CCEEEE-EECTTSCEEEEETTTTEEEEECT-TCCEEEEEECSSEE-EEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred EeCCCC--CCcceE-EECCCCCEEEEeCCCCeEEEECC-CCceEEEEeCCCCc-eeEEEcCCCcEEEEeccCCcceEEEE
Confidence 345544 689999 799999999997 7899999976 55555556678898 999999999999999653 3 8888
Q ss_pred C-CCCeEEEEEE
Q 032726 120 N-SQALIIVCVC 130 (135)
Q Consensus 120 ~-~~G~v~vl~~ 130 (135)
+ ++|++++++-
T Consensus 101 d~~~g~~~~~~~ 112 (306)
T 2p4o_A 101 VKSDGTVETLLT 112 (306)
T ss_dssp ECTTSCEEEEEE
T ss_pred cCCCCeEEEEEe
Confidence 7 5798887653
No 5
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.72 E-value=8.2e-08 Score=74.51 Aligned_cols=86 Identities=10% Similarity=0.073 Sum_probs=72.3
Q ss_pred cceEeccCCcCCCceeeeeeCCCc--EEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCC-CceEE
Q 032726 42 DLIKLGEGCVSHPEDVSVVVRKGA--LYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSK-KVRQH 118 (135)
Q Consensus 42 ~~e~l~~g~~~GPEdi~avd~~G~--lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~-~GLl~ 118 (135)
..|++..+ ..-+|.. +.+++|+ +|++..+|+|+|++. +++.+.+....+.| .|+++|++|+||||+.. .++.+
T Consensus 36 ~~~~l~~~-~~~~egp-~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~-~gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 36 RLLTLYDQ-ATWSEGP-AWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFT-NGNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp CCEEEECC-CSSEEEE-EEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCE-EEEEECTTSCEEEEETTTTEEEE
T ss_pred ceEEEecC-CcCccCC-eEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCcc-ceeeECCCCCEEEEECCCCEEEE
Confidence 45667776 4678999 7998887 788889999999987 66677777778888 99999999999999976 78999
Q ss_pred eCCCCeEEEEEEE
Q 032726 119 TNSQALIIVCVCV 131 (135)
Q Consensus 119 V~~~G~v~vl~~~ 131 (135)
++++|.+++++-.
T Consensus 112 ~~~~g~~~~~~~~ 124 (305)
T 3dr2_A 112 SDADGQAHLLVGR 124 (305)
T ss_dssp ECTTSCEEEEECE
T ss_pred ECCCCCEEEEEec
Confidence 9999999888643
No 6
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.71 E-value=9.5e-08 Score=72.95 Aligned_cols=82 Identities=13% Similarity=0.186 Sum_probs=68.0
Q ss_pred eEeccCCcCCCceeeeeeCCCc--EEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCC-CceEEeC
Q 032726 44 IKLGEGCVSHPEDVSVVVRKGA--LYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSK-KVRQHTN 120 (135)
Q Consensus 44 e~l~~g~~~GPEdi~avd~~G~--lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~-~GLl~V~ 120 (135)
+.+..+ ..-||++ ++|++|+ +++++.+|+|.+++..++ .+.+....+.| .|+++|++|+|||++.. .++.+++
T Consensus 21 ~~l~~~-~~~~eg~-~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~-~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 21 RRLADG-FTWTEGP-VYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQ-NGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp EEEECC-CSSEEEE-EEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSE-EEEEECTTCCEEEEETTTTEEEEEC
T ss_pred EEEecC-CccccCC-eEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCc-ceeeECCCCcEEEEecCCCeEEEEc
Confidence 455554 5789999 7999997 778899999999988555 66676667788 99999999999999975 7899999
Q ss_pred C-CCeEEEEE
Q 032726 121 S-QALIIVCV 129 (135)
Q Consensus 121 ~-~G~v~vl~ 129 (135)
+ +|+++.+.
T Consensus 97 ~~~g~~~~~~ 106 (296)
T 3e5z_A 97 EPGGEWESIA 106 (296)
T ss_dssp STTCCEEEEE
T ss_pred CCCCcEEEEe
Confidence 8 79887764
No 7
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.49 E-value=5.1e-07 Score=67.05 Aligned_cols=71 Identities=18% Similarity=0.143 Sum_probs=53.6
Q ss_pred CCceeeeeeCCCcEEE-E-ecCcEEEEEEcCCCceeEEeeec-CCCCCceeECCCCCEEEEeCCCceEEeCCCCeE
Q 032726 53 HPEDVSVVVRKGALYT-A-TNDGWVKYFILHNETLVNWKHID-SQSLLGLTTTKEGDVVICDSKKVRQHTNSQALI 125 (135)
Q Consensus 53 GPEdi~avd~~G~lYT-g-~~dG~I~ri~~~~~~~~~~~~t~-GRPpLGl~fd~~G~LiVaDa~~GLl~V~~~G~v 125 (135)
.|+++ ++|++|++|. + ..+|+|.+++........+...+ .+| -||++|++|+|||+|...++.+++++|..
T Consensus 25 ~p~~i-~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p-~~i~~~~~g~l~v~~~~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGV-AVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQP-QGLAVDGAGTVYVTDFNNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEE-EECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSC-CCEEECTTCCEEEEETTTEEEEECTTCSC
T ss_pred Cccce-EECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCc-ceeEECCCCCEEEEcCCCEEEEEeCCCce
Confidence 99999 7999999998 7 67899999965322222222222 467 99999999999999997789999987643
No 8
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.45 E-value=4.3e-07 Score=74.24 Aligned_cols=77 Identities=12% Similarity=0.100 Sum_probs=60.7
Q ss_pred cceEeccCCcCCCceeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeee------cCCCCCceeECCC----CCEEEEe
Q 032726 42 DLIKLGEGCVSHPEDVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHI------DSQSLLGLTTTKE----GDVVICD 111 (135)
Q Consensus 42 ~~e~l~~g~~~GPEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t------~GRPpLGl~fd~~----G~LiVaD 111 (135)
++|.+..+ +..|+++ +++++|++|.+..+|+|++++. ++. +.+..+ .+.| +||+++++ |.|||++
T Consensus 20 ~~~~va~~-l~~P~~i-a~~pdG~l~V~e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~-~gia~~pdf~~~g~lyv~~ 94 (354)
T 3a9g_A 20 KISEVASD-LEVPWSI-APLGGGRYLVTERPGRLVLISP-SGK-KLVASFDVANVGEAGL-LGLALHPEFPKKSWVYLYA 94 (354)
T ss_dssp EEEEEECS-CSCEEEE-EEEETTEEEEEETTTEEEEECS-SCE-EEEEECCCCCSTTCSE-EEEEECTTTTTSCEEEEEE
T ss_pred EEEEEeCC-CCCCeEE-EEcCCCeEEEEeCCCEEEEEeC-CCc-eEeeccceeecCCCce-eeEEeCCCCCcCCEEEEEE
Confidence 45667765 7899999 7999999999999999999964 555 444321 3567 99999985 8999999
Q ss_pred CC--------CceEEeCCCC
Q 032726 112 SK--------KVRQHTNSQA 123 (135)
Q Consensus 112 a~--------~GLl~V~~~G 123 (135)
.. ..+.+++.++
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~ 114 (354)
T 3a9g_A 95 SYFAEGGHIRNRVIRGRLDG 114 (354)
T ss_dssp EEECGGGCEEEEEEEEEECS
T ss_pred eccCCCCCcceEEEEEEECC
Confidence 86 5688888654
No 9
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.40 E-value=1.2e-06 Score=71.24 Aligned_cols=77 Identities=16% Similarity=0.231 Sum_probs=60.2
Q ss_pred cceEeccCCcCCCceeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeee------cCCCCCceeECCC----CCEEEEe
Q 032726 42 DLIKLGEGCVSHPEDVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHI------DSQSLLGLTTTKE----GDVVICD 111 (135)
Q Consensus 42 ~~e~l~~g~~~GPEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t------~GRPpLGl~fd~~----G~LiVaD 111 (135)
+++.+..+ +..|+++ +++++|++|.+..+|+|++++ ++..+.+..+ .+.| +||+|+++ |.|||++
T Consensus 22 ~~~~va~~-l~~P~~i-a~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p-~gia~~pdf~~~g~lYv~~ 96 (352)
T 2ism_A 22 RVEEVVGG-LEVPWAL-AFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGL-LGLALHPRFPQEPYVYAYR 96 (352)
T ss_dssp CEEEEECC-CSCEEEE-EECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSE-EEEEECTTTTTSCEEEEEE
T ss_pred EEEEEECC-CCCceEE-EEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCc-eeEEECCCCCCCCEEEEEE
Confidence 45667665 7899999 799999999999999999997 4544433322 4677 99999987 8999999
Q ss_pred CC------CceEEeCCCC
Q 032726 112 SK------KVRQHTNSQA 123 (135)
Q Consensus 112 a~------~GLl~V~~~G 123 (135)
.. ..+.+++.++
T Consensus 97 ~~~~~~~~~~v~r~~~~~ 114 (352)
T 2ism_A 97 TVAEGGLRNQVVRLRHLG 114 (352)
T ss_dssp EECTTSSEEEEEEEEECS
T ss_pred ecCCCCCccEEEEEEeCC
Confidence 86 5688888653
No 10
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.37 E-value=2.1e-06 Score=67.41 Aligned_cols=80 Identities=10% Similarity=0.063 Sum_probs=58.9
Q ss_pred EeccCCcCCCceeeeeeCCCcEEEEec-CcEEEEEEcCCCce---eEEee---------ecCCCCCceeECC-CCCEEEE
Q 032726 45 KLGEGCVSHPEDVSVVVRKGALYTATN-DGWVKYFILHNETL---VNWKH---------IDSQSLLGLTTTK-EGDVVIC 110 (135)
Q Consensus 45 ~l~~g~~~GPEdi~avd~~G~lYTg~~-dG~I~ri~~~~~~~---~~~~~---------t~GRPpLGl~fd~-~G~LiVa 110 (135)
.+..+.+..|.++ ++|++|++|.+.. +++|.+++. ++.. ..+.. .-.+| .|+++|+ +|+|||+
T Consensus 84 ~~~~~~~~~p~gi-a~d~~g~l~v~d~~~~~v~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~~P-~~ia~~~~~g~lyv~ 160 (329)
T 3fvz_A 84 SSGKNLFYLPHGL-SIDTDGNYWVTDVALHQVFKLDP-HSKEGPLLILGRSMQPGSDQNHFCQP-TDVAVEPSTGAVFVS 160 (329)
T ss_dssp EECTTTCSSEEEE-EECTTSCEEEEETTTTEEEEECT-TCSSCCSEEESBTTBCCCSTTCCSSE-EEEEECTTTCCEEEE
T ss_pred ccCCCccCCceEE-EECCCCCEEEEECCCCEEEEEeC-CCCeEEEEEecccCCCCCCccccCCC-cEEEEeCCCCeEEEE
Confidence 3445667899999 7999999998765 799999976 4432 22211 01267 9999998 8999999
Q ss_pred eC--CCceEEeCCCCeEEE
Q 032726 111 DS--KKVRQHTNSQALIIV 127 (135)
Q Consensus 111 Da--~~GLl~V~~~G~v~v 127 (135)
|. ..-+.+++++|.+..
T Consensus 161 d~~~~~~I~~~~~~g~~~~ 179 (329)
T 3fvz_A 161 DGYCNSRIVQFSPSGKFVT 179 (329)
T ss_dssp ECSSCCEEEEECTTSCEEE
T ss_pred eCCCCCeEEEEcCCCCEEE
Confidence 96 466888898887644
No 11
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.35 E-value=1.8e-06 Score=66.32 Aligned_cols=74 Identities=11% Similarity=0.096 Sum_probs=58.7
Q ss_pred cCCCceeeeeeCCCcEE-EEecCcEEEEEEcCCCceeEEe-eecCCCCCceeECCCCCEEEEeCCC-----ceEEeCCC-
Q 032726 51 VSHPEDVSVVVRKGALY-TATNDGWVKYFILHNETLVNWK-HIDSQSLLGLTTTKEGDVVICDSKK-----VRQHTNSQ- 122 (135)
Q Consensus 51 ~~GPEdi~avd~~G~lY-Tg~~dG~I~ri~~~~~~~~~~~-~t~GRPpLGl~fd~~G~LiVaDa~~-----GLl~V~~~- 122 (135)
...||++ ++|++|++| ++..+|.|++++..++....+. ...++| .++++|++|+|||++... ++.+++++
T Consensus 44 ~~~~~~~-~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 44 GLQLEGL-NFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANP-AAIKIHKDGRLFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp CCCEEEE-EECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSE-EEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred CccccCc-EECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCc-ceEEECCCCcEEEEeCCCCCCCceEEEEeCCC
Confidence 5689999 799999998 5788999999987555555443 345677 999999999999998765 89999976
Q ss_pred CeEE
Q 032726 123 ALII 126 (135)
Q Consensus 123 G~v~ 126 (135)
+.++
T Consensus 122 ~~~~ 125 (333)
T 2dg1_A 122 DNLQ 125 (333)
T ss_dssp CSCE
T ss_pred CEEE
Confidence 4443
No 12
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.33 E-value=6.2e-06 Score=61.29 Aligned_cols=77 Identities=14% Similarity=0.260 Sum_probs=61.1
Q ss_pred CcCCCceeeeeeCCCcEEEEec-CcEEEEEEcCCCceeEEee--ecCCCCCceeECCCCCEEEEeCC-CceEEeCCCCeE
Q 032726 50 CVSHPEDVSVVVRKGALYTATN-DGWVKYFILHNETLVNWKH--IDSQSLLGLTTTKEGDVVICDSK-KVRQHTNSQALI 125 (135)
Q Consensus 50 ~~~GPEdi~avd~~G~lYTg~~-dG~I~ri~~~~~~~~~~~~--t~GRPpLGl~fd~~G~LiVaDa~-~GLl~V~~~G~v 125 (135)
....|.++ ++|++|++|.++. +|.|.+++.. +....+.. ....| .++++|++|++||++.. .++.+++++|.+
T Consensus 13 ~~~~~~~i-~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~-~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~ 89 (299)
T 2z2n_A 13 QDTGPYGI-TVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKV-MCLTISSDGEVWFTENAANKIGRITKKGII 89 (299)
T ss_dssp SSCCEEEE-EECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCE-EEEEECTTSCEEEEETTTTEEEEECTTSCE
T ss_pred cCCCccce-EECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCce-eeEEECCCCCEEEeCCCCCeEEEECCCCcE
Confidence 35789999 7999999999987 7999999774 55544432 24567 99999999999999985 559999998887
Q ss_pred EEEE
Q 032726 126 IVCV 129 (135)
Q Consensus 126 ~vl~ 129 (135)
+...
T Consensus 90 ~~~~ 93 (299)
T 2z2n_A 90 KEYT 93 (299)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6543
No 13
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.27 E-value=5e-06 Score=62.63 Aligned_cols=74 Identities=19% Similarity=0.289 Sum_probs=56.8
Q ss_pred CCcCCCceeeeeeCCCcEEEEec-CcEEEEEEcCCCc-eeEEeeec--CCCCCceeECCCCCEEEEeCCC--ceEEeCCC
Q 032726 49 GCVSHPEDVSVVVRKGALYTATN-DGWVKYFILHNET-LVNWKHID--SQSLLGLTTTKEGDVVICDSKK--VRQHTNSQ 122 (135)
Q Consensus 49 g~~~GPEdi~avd~~G~lYTg~~-dG~I~ri~~~~~~-~~~~~~t~--GRPpLGl~fd~~G~LiVaDa~~--GLl~V~~~ 122 (135)
+....|.++ ++|++|++|.+.. +++|.+++. ++. ...+...+ ..| -||++|++|+|||+|... ++...+++
T Consensus 161 ~~~~~p~~i-~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p-~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 161 KHLEFPNGV-VVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYP-IGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp TTCSSEEEE-EECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSE-EEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred CccCCcEEE-EECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCC-cEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 345679999 7999999998864 899999986 443 23333222 467 999999999999999875 68889988
Q ss_pred CeE
Q 032726 123 ALI 125 (135)
Q Consensus 123 G~v 125 (135)
|..
T Consensus 238 g~~ 240 (286)
T 1q7f_A 238 GQL 240 (286)
T ss_dssp SCE
T ss_pred CCE
Confidence 753
No 14
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.26 E-value=7.8e-06 Score=67.45 Aligned_cols=78 Identities=9% Similarity=0.011 Sum_probs=60.1
Q ss_pred CcCCCceeeeeeC-CCcEEEEecCcEEEEEEcCCCceeEEee------ecCCCCC-ceeECC-CCCEEEEeCCCc-eEEe
Q 032726 50 CVSHPEDVSVVVR-KGALYTATNDGWVKYFILHNETLVNWKH------IDSQSLL-GLTTTK-EGDVVICDSKKV-RQHT 119 (135)
Q Consensus 50 ~~~GPEdi~avd~-~G~lYTg~~dG~I~ri~~~~~~~~~~~~------t~GRPpL-Gl~fd~-~G~LiVaDa~~G-Ll~V 119 (135)
...+|.++ ++|+ +|.+|....+|+|+|++..++..+.++. .+-.| . ||+||+ +|+|||+|...+ +.++
T Consensus 217 ~~~~p~~i-av~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P-~~~ia~~p~~g~lyv~d~~~~~I~~~ 294 (409)
T 3hrp_A 217 FSGKIGAV-ALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNP-GPYLIYYFVDSNFYMSDQNLSSVYKI 294 (409)
T ss_dssp SCSCCCBC-EECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSS-CCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred hcCCcEEE-EEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCc-cccEEEeCCCCEEEEEeCCCCEEEEE
Confidence 45789999 7998 8999999999999999875444444321 12235 8 999998 689999998766 6778
Q ss_pred CCCCeEEEEE
Q 032726 120 NSQALIIVCV 129 (135)
Q Consensus 120 ~~~G~v~vl~ 129 (135)
+.+|.+++++
T Consensus 295 ~~~g~~~~~~ 304 (409)
T 3hrp_A 295 TPDGECEWFC 304 (409)
T ss_dssp CTTCCEEEEE
T ss_pred ecCCCEEEEE
Confidence 8899877664
No 15
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.26 E-value=4.3e-06 Score=61.99 Aligned_cols=72 Identities=14% Similarity=0.172 Sum_probs=54.0
Q ss_pred CCcCCCceeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeeec-CCCCCceeECCCCCEEEEeCCC-ceEEeCCC
Q 032726 49 GCVSHPEDVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHID-SQSLLGLTTTKEGDVVICDSKK-VRQHTNSQ 122 (135)
Q Consensus 49 g~~~GPEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~-GRPpLGl~fd~~G~LiVaDa~~-GLl~V~~~ 122 (135)
.....|.++ ++|++|++|.+..+++|.+++..+.....+...+ ..| -++++|++|+|||+|... ++.+++..
T Consensus 64 ~~~~~p~~i-~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p-~~i~~~~~g~l~v~~~~~~~i~~~~~~ 137 (270)
T 1rwi_B 64 NGLYQPQGL-AVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYP-EGLAVDTQGAVYVADRGNNRVVKLAAG 137 (270)
T ss_dssp CSCCSCCCE-EECTTCCEEEEETTTEEEEECTTCSCCEECCCCSCSSE-EEEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred CCcCCccee-EECCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcCCC-cceEECCCCCEEEEECCCCEEEEEECC
Confidence 345689999 7999999999998999999976433333332222 456 999999999999999764 47777643
No 16
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.23 E-value=1.1e-05 Score=60.03 Aligned_cols=76 Identities=9% Similarity=0.111 Sum_probs=60.0
Q ss_pred CcCCCceeeeeeCCCcEEEEec-CcEEEEEEcCCCceeEEee--ecCCCCCceeECCCCCEEEEeCC-CceEEeCCCCeE
Q 032726 50 CVSHPEDVSVVVRKGALYTATN-DGWVKYFILHNETLVNWKH--IDSQSLLGLTTTKEGDVVICDSK-KVRQHTNSQALI 125 (135)
Q Consensus 50 ~~~GPEdi~avd~~G~lYTg~~-dG~I~ri~~~~~~~~~~~~--t~GRPpLGl~fd~~G~LiVaDa~-~GLl~V~~~G~v 125 (135)
....|+++ ++|++|++|.+.. +|+|.+++.. +....+.. ....| .++++|++|++||++.. .++.+++++|.+
T Consensus 18 ~~~~p~~i-~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~-~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~ 94 (300)
T 2qc5_A 18 PDSGPYGI-TSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKV-MCLIVSSLGDIWFTENGANKIGKLSKKGGF 94 (300)
T ss_dssp TTCCEEEE-EECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCE-EEEEECTTSCEEEEETTTTEEEEECTTSCE
T ss_pred CCCCccee-eECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcc-eeEEECCCCCEEEEecCCCeEEEECCCCCe
Confidence 35799999 7999999999985 7999999764 55444322 12567 99999999999999985 559999988887
Q ss_pred EEE
Q 032726 126 IVC 128 (135)
Q Consensus 126 ~vl 128 (135)
+..
T Consensus 95 ~~~ 97 (300)
T 2qc5_A 95 TEY 97 (300)
T ss_dssp EEE
T ss_pred EEe
Confidence 643
No 17
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.22 E-value=1.1e-05 Score=59.97 Aligned_cols=75 Identities=13% Similarity=0.136 Sum_probs=60.1
Q ss_pred cCCCceeeeeeCCCcEEEEec-CcEEEEEEcCCCceeEEee--ecCCCCCceeECCCCCEEEEeC-CCceEEeCCCCeEE
Q 032726 51 VSHPEDVSVVVRKGALYTATN-DGWVKYFILHNETLVNWKH--IDSQSLLGLTTTKEGDVVICDS-KKVRQHTNSQALII 126 (135)
Q Consensus 51 ~~GPEdi~avd~~G~lYTg~~-dG~I~ri~~~~~~~~~~~~--t~GRPpLGl~fd~~G~LiVaDa-~~GLl~V~~~G~v~ 126 (135)
...|.++ ++|++|++|.+.. +++|.+++.. +....+.. ...+| -++++|++|++||++. ..++++++++|.++
T Consensus 61 ~~~~~~i-~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~-~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~ 137 (300)
T 2qc5_A 61 DAKVMCL-IVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGP-YGITEGLNGDIWFTQLNGDRIGKLTADGTIY 137 (300)
T ss_dssp TCCEEEE-EECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCE-EEEEECSTTCEEEEETTTTEEEEECTTSCEE
T ss_pred CCcceeE-EECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCC-ccceECCCCCEEEEccCCCeEEEECCCCCEE
Confidence 4689999 7999999999987 7899999774 55554432 24567 9999999999999998 46799999888877
Q ss_pred EE
Q 032726 127 VC 128 (135)
Q Consensus 127 vl 128 (135)
..
T Consensus 138 ~~ 139 (300)
T 2qc5_A 138 EY 139 (300)
T ss_dssp EE
T ss_pred Ec
Confidence 44
No 18
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.21 E-value=3.4e-06 Score=70.73 Aligned_cols=72 Identities=13% Similarity=0.010 Sum_probs=59.6
Q ss_pred CcCCCceeeeeeC---CCcEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeC-----CCceEEeCC
Q 032726 50 CVSHPEDVSVVVR---KGALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDS-----KKVRQHTNS 121 (135)
Q Consensus 50 ~~~GPEdi~avd~---~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa-----~~GLl~V~~ 121 (135)
++..|+.+ ++|+ +|+||.+...++|.||+..++....+.....+| .|+++|++|+|||+|. ..|++.+++
T Consensus 137 ~~~~P~gv-avd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P-~giavd~dG~lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 137 AFDNIWRM-MFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQC-ADVNFTLNGDMVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCSCCCEE-EECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCE-EEEEECTTCCEEEEECCSCTTSEEEEEECG
T ss_pred ccCCCceE-EEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCc-cEEEECCCCCEEEEcCCCCcccceEEEEEC
Confidence 67889999 7997 499999998899999987666666666656678 9999999999999997 457777776
Q ss_pred CC
Q 032726 122 QA 123 (135)
Q Consensus 122 ~G 123 (135)
++
T Consensus 215 ~~ 216 (433)
T 4hw6_A 215 AS 216 (433)
T ss_dssp GG
T ss_pred CC
Confidence 53
No 19
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.19 E-value=1.7e-05 Score=60.37 Aligned_cols=75 Identities=7% Similarity=0.014 Sum_probs=58.5
Q ss_pred CCCceeeeeeCCCcEEEEec-CcEEEEEEcCCCceeEEee-----ecCCCCCceeECCCCCEEEEeC-------------
Q 032726 52 SHPEDVSVVVRKGALYTATN-DGWVKYFILHNETLVNWKH-----IDSQSLLGLTTTKEGDVVICDS------------- 112 (135)
Q Consensus 52 ~GPEdi~avd~~G~lYTg~~-dG~I~ri~~~~~~~~~~~~-----t~GRPpLGl~fd~~G~LiVaDa------------- 112 (135)
..|.++ ++|++|++|.+.. +++|.+++..++..+.+.. ...+| -++++|++|++||+|+
T Consensus 69 ~~~~~l-~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~-~~i~~d~~G~l~vtd~~~g~~~~~~~~~~ 146 (296)
T 3e5z_A 69 HHQNGH-CLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSP-NDVCLAPDGSLWFSDPTYGIDKPEEGYGG 146 (296)
T ss_dssp SSEEEE-EECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCC-CCEEECTTSCEEEEECSHHHHCGGGSSCC
T ss_pred CCccee-eECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCC-CCEEECCCCCEEEECCccccccccccccc
Confidence 568899 7999999999987 4899999775565544321 23466 8999999999999986
Q ss_pred -----CCceEEeCCCCeEEEE
Q 032726 113 -----KKVRQHTNSQALIIVC 128 (135)
Q Consensus 113 -----~~GLl~V~~~G~v~vl 128 (135)
..+|++++++|.++.+
T Consensus 147 ~~~~~~~~l~~~~~~g~~~~~ 167 (296)
T 3e5z_A 147 EMELPGRWVFRLAPDGTLSAP 167 (296)
T ss_dssp CCCSSSCEEEEECTTSCEEEE
T ss_pred cccCCCcEEEEECCCCCEEEe
Confidence 2389999998887765
No 20
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.19 E-value=1.1e-05 Score=63.15 Aligned_cols=75 Identities=16% Similarity=0.282 Sum_probs=55.7
Q ss_pred CCcCCCceeeeeeC-CCcEEEEe--cCcEEEEEEcCCCce-eEEeeecC----------CCCCceeECCC-CCEEEEeCC
Q 032726 49 GCVSHPEDVSVVVR-KGALYTAT--NDGWVKYFILHNETL-VNWKHIDS----------QSLLGLTTTKE-GDVVICDSK 113 (135)
Q Consensus 49 g~~~GPEdi~avd~-~G~lYTg~--~dG~I~ri~~~~~~~-~~~~~t~G----------RPpLGl~fd~~-G~LiVaDa~ 113 (135)
+.+..|.++ ++|+ +|.+|... .+++|.+++. ++.. ..+...+. +| -||++|++ |+|||+|..
T Consensus 140 ~~~~~P~~i-a~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p-~gia~d~~~g~l~v~d~~ 216 (329)
T 3fvz_A 140 NHFCQPTDV-AVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVP-HSLALVPHLDQLCVADRE 216 (329)
T ss_dssp TCCSSEEEE-EECTTTCCEEEEECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCE-EEEEEETTTTEEEEEETT
T ss_pred cccCCCcEE-EEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCC-cEEEEECCCCEEEEEECC
Confidence 456689999 7998 89999998 3899999975 5543 33333222 37 99999988 899999988
Q ss_pred Cc-eEEeCCC-CeEE
Q 032726 114 KV-RQHTNSQ-ALII 126 (135)
Q Consensus 114 ~G-Ll~V~~~-G~v~ 126 (135)
.+ +.+++.+ |+..
T Consensus 217 ~~~I~~~~~~~G~~~ 231 (329)
T 3fvz_A 217 NGRIQCFKTDTKEFV 231 (329)
T ss_dssp TTEEEEEETTTCCEE
T ss_pred CCEEEEEECCCCcEE
Confidence 76 5556766 7543
No 21
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.18 E-value=1.2e-05 Score=59.65 Aligned_cols=75 Identities=12% Similarity=0.154 Sum_probs=59.6
Q ss_pred cCCCceeeeeeCCCcEEEEec-CcEEEEEEcCCCceeEEee--ecCCCCCceeECCCCCEEEEeCC-CceEEeCCCCeEE
Q 032726 51 VSHPEDVSVVVRKGALYTATN-DGWVKYFILHNETLVNWKH--IDSQSLLGLTTTKEGDVVICDSK-KVRQHTNSQALII 126 (135)
Q Consensus 51 ~~GPEdi~avd~~G~lYTg~~-dG~I~ri~~~~~~~~~~~~--t~GRPpLGl~fd~~G~LiVaDa~-~GLl~V~~~G~v~ 126 (135)
...|.++ ++|++|++|.+.. +|+|.+++. ++..+.+.. ....| .++++|++|+|||++.. .++.+++++|.+.
T Consensus 56 ~~~~~~i-~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~-~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~ 132 (299)
T 2z2n_A 56 DAKVMCL-TISSDGEVWFTENAANKIGRITK-KGIIKEYTLPNPDSAP-YGITEGPNGDIWFTEMNGNRIGRITDDGKIR 132 (299)
T ss_dssp TCCEEEE-EECTTSCEEEEETTTTEEEEECT-TSCEEEEECSSTTCCE-EEEEECTTSCEEEEETTTTEEEEECTTCCEE
T ss_pred cCceeeE-EECCCCCEEEeCCCCCeEEEECC-CCcEEEEeCCCcCCCc-eeeEECCCCCEEEEecCCceEEEECCCCCEE
Confidence 4689999 7999999999987 799999976 455544432 34567 99999999999999964 5789999988776
Q ss_pred EE
Q 032726 127 VC 128 (135)
Q Consensus 127 vl 128 (135)
..
T Consensus 133 ~~ 134 (299)
T 2z2n_A 133 EY 134 (299)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 22
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.16 E-value=7.8e-06 Score=61.58 Aligned_cols=76 Identities=17% Similarity=0.274 Sum_probs=57.3
Q ss_pred cCCcCCCceeeeeeCCCcEEEE-ecCcEEEEEEcCCCce-eEEeeec------CCCCCceeE-CCCCCEEEEeC--CCce
Q 032726 48 EGCVSHPEDVSVVVRKGALYTA-TNDGWVKYFILHNETL-VNWKHID------SQSLLGLTT-TKEGDVVICDS--KKVR 116 (135)
Q Consensus 48 ~g~~~GPEdi~avd~~G~lYTg-~~dG~I~ri~~~~~~~-~~~~~t~------GRPpLGl~f-d~~G~LiVaDa--~~GL 116 (135)
.++...|.++ ++|++|++|.+ ..+++|.+++. ++.. ..+...+ .+| .++++ +++|+|||+|. ...+
T Consensus 26 ~g~~~~p~~v-~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~~~p-~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 26 EGQFTEPSGV-AVNAQNDIIVADTNNHRIQIFDK-EGRFKFQFGECGKRDSQLLYP-NRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TTCBSCEEEE-EECTTCCEEEEEGGGTEEEEECT-TSCEEEEECCBSSSTTCBSSE-EEEEEETTTTEEEEEECGGGCEE
T ss_pred CCccCCCceE-EECCCCCEEEEECCCCEEEEECC-CCcEEEEecccCCCcccccCc-eEEEEEcCCCeEEEEcCCCCCEE
Confidence 3567889999 79999999988 57899999976 3432 3332211 367 89999 58999999996 6788
Q ss_pred EEeCCCCeEE
Q 032726 117 QHTNSQALII 126 (135)
Q Consensus 117 l~V~~~G~v~ 126 (135)
.+++++|...
T Consensus 103 ~~~d~~g~~~ 112 (286)
T 1q7f_A 103 QIYNQYGQFV 112 (286)
T ss_dssp EEECTTSCEE
T ss_pred EEECCCCcEE
Confidence 8888887653
No 23
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.14 E-value=1.7e-05 Score=61.75 Aligned_cols=70 Identities=10% Similarity=0.014 Sum_probs=54.5
Q ss_pred cCCCceeeeeeC-CCcEEEEecC------------------cEEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEE
Q 032726 51 VSHPEDVSVVVR-KGALYTATND------------------GWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVIC 110 (135)
Q Consensus 51 ~~GPEdi~avd~-~G~lYTg~~d------------------G~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVa 110 (135)
...|.++ ++|+ +|++|.+... |+|+++++.++..+.+......| -||+++++|+ |||+
T Consensus 125 ~~~p~~i-~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p-~gia~~~dg~~lyv~ 202 (322)
T 2fp8_A 125 FKWLYAV-TVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVP-GGAEVSADSSFVLVA 202 (322)
T ss_dssp CSCEEEE-EECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCC-CEEEECTTSSEEEEE
T ss_pred ccccceE-EEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccC-cceEECCCCCEEEEE
Confidence 4569999 7999 9999998753 89999987555555544444677 9999999997 9999
Q ss_pred eCC-CceEEeCCC
Q 032726 111 DSK-KVRQHTNSQ 122 (135)
Q Consensus 111 Da~-~GLl~V~~~ 122 (135)
|.. ..+.+++.+
T Consensus 203 d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 203 EFLSHQIVKYWLE 215 (322)
T ss_dssp EGGGTEEEEEESS
T ss_pred eCCCCeEEEEECC
Confidence 986 457777755
No 24
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.07 E-value=2.4e-05 Score=64.52 Aligned_cols=74 Identities=14% Similarity=0.144 Sum_probs=55.5
Q ss_pred Cc-eeeeeeC-CCcEEEEec-CcEEEEEEcCCCceeEEeeec---------------CCCCCceeECCCCCEEEEeC-C-
Q 032726 54 PE-DVSVVVR-KGALYTATN-DGWVKYFILHNETLVNWKHID---------------SQSLLGLTTTKEGDVVICDS-K- 113 (135)
Q Consensus 54 PE-di~avd~-~G~lYTg~~-dG~I~ri~~~~~~~~~~~~t~---------------GRPpLGl~fd~~G~LiVaDa-~- 113 (135)
|- ++ ++|+ +|.+|.... +++|+|++. ++....+.-.. .+| -||++|++|+|||||. .
T Consensus 268 P~~~i-a~~p~~g~lyv~d~~~~~I~~~~~-~g~~~~~~g~~~~~g~~dg~~~~~~~~~P-~gia~d~dG~lyvad~~~~ 344 (409)
T 3hrp_A 268 PGPYL-IYYFVDSNFYMSDQNLSSVYKITP-DGECEWFCGSATQKTVQDGLREEALFAQP-NGMTVDEDGNFYIVDGFKG 344 (409)
T ss_dssp SCCEE-EEETTTTEEEEEETTTTEEEEECT-TCCEEEEEECTTCCSCBCEEGGGCBCSSE-EEEEECTTCCEEEEETTTT
T ss_pred ccccE-EEeCCCCEEEEEeCCCCEEEEEec-CCCEEEEEeCCCCCCcCCCcccccEeCCC-eEEEEeCCCCEEEEeCCCC
Confidence 44 99 7998 689998864 789999976 55444333221 247 9999999999999998 4
Q ss_pred CceEEeC-CCCeEEEEEE
Q 032726 114 KVRQHTN-SQALIIVCVC 130 (135)
Q Consensus 114 ~GLl~V~-~~G~v~vl~~ 130 (135)
.-+.+++ ++|.+++++-
T Consensus 345 ~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 345 YCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp CEEEEEETTTTEEEEEEE
T ss_pred CEEEEEECCCCEEEEEeC
Confidence 4467788 7899988764
No 25
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.02 E-value=3.6e-05 Score=57.98 Aligned_cols=74 Identities=14% Similarity=0.029 Sum_probs=58.1
Q ss_pred CCCceeeeeeCC-CcEEEEecCcEEEEEEcCCCceeEE-ee-----ecCCCCCceeECCCCCEEEEeCC-----------
Q 032726 52 SHPEDVSVVVRK-GALYTATNDGWVKYFILHNETLVNW-KH-----IDSQSLLGLTTTKEGDVVICDSK----------- 113 (135)
Q Consensus 52 ~GPEdi~avd~~-G~lYTg~~dG~I~ri~~~~~~~~~~-~~-----t~GRPpLGl~fd~~G~LiVaDa~----------- 113 (135)
..|.++ ++|++ |++|.++.++.|++++.. +....+ .. ...+| -++++|++|++||++..
T Consensus 71 ~~~~~i-~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~-~~i~~d~~g~l~v~~~~~~~~~~~~~~~ 147 (314)
T 1pjx_A 71 GIPAGC-QCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGC-NDCAFDYEGNLWITAPAGEVAPADYTRS 147 (314)
T ss_dssp CCEEEE-EECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCC-CEEEECTTSCEEEEECBCBCTTSCCCBT
T ss_pred CCCceE-EEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCC-cCEEECCCCCEEEEecCccccccccccc
Confidence 568899 79998 999999988899999874 554433 21 11346 89999999999999975
Q ss_pred -----CceEEeCCCCeEEEE
Q 032726 114 -----KVRQHTNSQALIIVC 128 (135)
Q Consensus 114 -----~GLl~V~~~G~v~vl 128 (135)
.++++++++|.++.+
T Consensus 148 ~~~~~~~l~~~~~~g~~~~~ 167 (314)
T 1pjx_A 148 MQEKFGSIYCFTTDGQMIQV 167 (314)
T ss_dssp TSSSCEEEEEECTTSCEEEE
T ss_pred ccCCCCeEEEECCCCCEEEe
Confidence 479999988877654
No 26
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.01 E-value=1.3e-05 Score=63.54 Aligned_cols=78 Identities=15% Similarity=0.188 Sum_probs=56.4
Q ss_pred ceEeccCCcCCCceeeeeeCCCcEEEEe---cCc--EEEEEEcCCCceeEEe---ee----cCCCCCceeECCCCCEEEE
Q 032726 43 LIKLGEGCVSHPEDVSVVVRKGALYTAT---NDG--WVKYFILHNETLVNWK---HI----DSQSLLGLTTTKEGDVVIC 110 (135)
Q Consensus 43 ~e~l~~g~~~GPEdi~avd~~G~lYTg~---~dG--~I~ri~~~~~~~~~~~---~t----~GRPpLGl~fd~~G~LiVa 110 (135)
.+.+.... ..|+++ +++++|++|.+. .+| +|++++ ++....|. .. -.+| .|+++|++|+|||+
T Consensus 9 ~~~v~~~~-~~p~~v-a~~~~g~~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p-~gv~~d~~g~L~v~ 83 (343)
T 2qe8_A 9 LEVVAELS-LAPGNI-TLTPDGRLFLSLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTV-LGIKSDGNGIVWML 83 (343)
T ss_dssp CEEEEEES-SCEEEE-EECTTSCEEEEECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCE-EEEEECSSSEEEEE
T ss_pred eEEEEEcC-CCcceE-EECCCCCEEEEeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEe-eEEEEcCCCcEEEE
Confidence 34444433 689999 799999999885 345 899986 44433221 11 2567 99999999999999
Q ss_pred eCC------CceEEeCC-CCeE
Q 032726 111 DSK------KVRQHTNS-QALI 125 (135)
Q Consensus 111 Da~------~GLl~V~~-~G~v 125 (135)
|.. ..|+++|. +|++
T Consensus 84 D~g~~~~~~~~i~~~d~~tg~~ 105 (343)
T 2qe8_A 84 DNGNQSKSVPKLVAWDTLNNQL 105 (343)
T ss_dssp ECHHHHTSCCEEEEEETTTTEE
T ss_pred cCCCCcCCCCeEEEEECCCCeE
Confidence 975 67999996 4874
No 27
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.99 E-value=8.2e-05 Score=57.29 Aligned_cols=78 Identities=10% Similarity=0.144 Sum_probs=57.8
Q ss_pred cCCCceeeeeeCCCcEEEEec---CcEEEEEEcCCCceeEE---eeecCCCCCceeECCCCC-EEEEeCCCc---eEEeC
Q 032726 51 VSHPEDVSVVVRKGALYTATN---DGWVKYFILHNETLVNW---KHIDSQSLLGLTTTKEGD-VVICDSKKV---RQHTN 120 (135)
Q Consensus 51 ~~GPEdi~avd~~G~lYTg~~---dG~I~ri~~~~~~~~~~---~~t~GRPpLGl~fd~~G~-LiVaDa~~G---Ll~V~ 120 (135)
...|..+ +++++|++|++.. +|.|..|+..++..+.+ ...+++| .+++|+++|+ |++++...| ++.++
T Consensus 39 ~~~p~~~-a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p-~~~a~spdg~~l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 39 TQNPTYL-ALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPP-AYVAVDEARQLVYSANYHKGTAEVMKIA 116 (347)
T ss_dssp CSCCCCE-EECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCC-SEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred cCCcceE-EEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCC-EEEEECCCCCEEEEEeCCCCEEEEEEeC
Confidence 4689999 7999999999887 58998887745544333 2356777 9999999998 788875555 56666
Q ss_pred CCCeEEEEEE
Q 032726 121 SQALIIVCVC 130 (135)
Q Consensus 121 ~~G~v~vl~~ 130 (135)
.+|..+.+..
T Consensus 117 ~~g~~~~~~~ 126 (347)
T 3hfq_A 117 ADGALTLTDT 126 (347)
T ss_dssp TTSCEEEEEE
T ss_pred CCCCeeecce
Confidence 6777766543
No 28
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.98 E-value=4.6e-05 Score=58.87 Aligned_cols=74 Identities=14% Similarity=0.170 Sum_probs=56.7
Q ss_pred CcCCCceeeeeeCCCc-EEEEecC------cEEEEEEcCCCce---eEEee-ecCCCCCceeECCCCCEEEEeCCCceEE
Q 032726 50 CVSHPEDVSVVVRKGA-LYTATND------GWVKYFILHNETL---VNWKH-IDSQSLLGLTTTKEGDVVICDSKKVRQH 118 (135)
Q Consensus 50 ~~~GPEdi~avd~~G~-lYTg~~d------G~I~ri~~~~~~~---~~~~~-t~GRPpLGl~fd~~G~LiVaDa~~GLl~ 118 (135)
....|..+ ++++||+ +|.+..+ ++|++++...+.. +.+.. ..|.| -||++|++|+|||++ ..|+.+
T Consensus 186 ~~~~p~gl-~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~p-dgi~~d~~G~lwv~~-~~gv~~ 262 (305)
T 3dr2_A 186 DLDHPNGL-AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLP-DGFCVDRGGWLWSSS-GTGVCV 262 (305)
T ss_dssp EESSEEEE-EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCC-CSEEECTTSCEEECC-SSEEEE
T ss_pred cCCCCcce-EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCC-CeEEECCCCCEEEec-CCcEEE
Confidence 35688999 7999986 9998876 7999987633322 22222 35778 999999999999998 679999
Q ss_pred eCCCCeEE
Q 032726 119 TNSQALII 126 (135)
Q Consensus 119 V~~~G~v~ 126 (135)
++++|...
T Consensus 263 ~~~~g~~~ 270 (305)
T 3dr2_A 263 FDSDGQLL 270 (305)
T ss_dssp ECTTSCEE
T ss_pred ECCCCCEE
Confidence 99998654
No 29
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.97 E-value=1.2e-05 Score=67.12 Aligned_cols=74 Identities=11% Similarity=0.001 Sum_probs=58.6
Q ss_pred CcCCCceeeeeeC--CCcEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEEeCC-----CceEEeCC
Q 032726 50 CVSHPEDVSVVVR--KGALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVICDSK-----KVRQHTNS 121 (135)
Q Consensus 50 ~~~GPEdi~avd~--~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVaDa~-----~GLl~V~~ 121 (135)
++..|+.+ ++|+ +|+||.....++|.+|+...+....+.....+| .||+||++|+ |||+|.. +.++.+++
T Consensus 135 ~~~~P~~l-avdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P-~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 135 GFGGAVWL-SFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKV-RTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCSCCCEE-EEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCE-EEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCCCCEE-EECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCc-ceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 46789999 7994 689999999899999988555566666667778 9999999998 9999973 34566666
Q ss_pred CCeE
Q 032726 122 QALI 125 (135)
Q Consensus 122 ~G~v 125 (135)
+|..
T Consensus 213 ~g~~ 216 (430)
T 3tc9_A 213 ESGF 216 (430)
T ss_dssp GGTS
T ss_pred CCce
Confidence 6543
No 30
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.94 E-value=3.3e-05 Score=62.60 Aligned_cols=63 Identities=13% Similarity=0.183 Sum_probs=48.7
Q ss_pred CCcCCCceeeeeeCCCcEEEEec--------------CcEEEEEEcCCC--------------ceeEEeeecCC-CCCce
Q 032726 49 GCVSHPEDVSVVVRKGALYTATN--------------DGWVKYFILHNE--------------TLVNWKHIDSQ-SLLGL 99 (135)
Q Consensus 49 g~~~GPEdi~avd~~G~lYTg~~--------------dG~I~ri~~~~~--------------~~~~~~~t~GR-PpLGl 99 (135)
+..+.|.++ ++++||.+|.++- .|+|+|+++ ++ ..+.|+ .+-| | -||
T Consensus 132 ~~~h~~~~l-~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~-dG~~p~~npf~~~~~~~~~i~a-~G~rnp-~g~ 207 (352)
T 2ism_A 132 HGLHSGGRI-AFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTP-EGEPAPGNPFLGRRGARPEVYS-LGHRNP-QGL 207 (352)
T ss_dssp TCCCCCCCE-EECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECT-TSSBCTTCTTTTCTTSCTTEEE-ECCSEE-CCC
T ss_pred CCCcCCceE-EECCCCCEEEEECCCCCCccccCCCCCceEEEEEcC-CCCCCCCCcccCCCCCCccEEE-EcCCCc-ccE
Confidence 345788999 7999999999873 389999987 44 234444 3556 6 999
Q ss_pred eECC-CCCEEEEeCCCc
Q 032726 100 TTTK-EGDVVICDSKKV 115 (135)
Q Consensus 100 ~fd~-~G~LiVaDa~~G 115 (135)
+||+ +|+||++|....
T Consensus 208 a~d~~~g~l~v~d~g~~ 224 (352)
T 2ism_A 208 AWHPKTGELFSSEHGPS 224 (352)
T ss_dssp EECTTTCCEEEEEECC-
T ss_pred EEECCCCCEEEEEcCCC
Confidence 9998 899999998655
No 31
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.92 E-value=5.6e-05 Score=57.18 Aligned_cols=78 Identities=8% Similarity=0.069 Sum_probs=56.0
Q ss_pred eccCCcCCCceeeeeeC-CCcEEEEec-CcEEEEEEcCCCceeEEeeec-CCCCCceeECC-CCCEEEEeCC---CceEE
Q 032726 46 LGEGCVSHPEDVSVVVR-KGALYTATN-DGWVKYFILHNETLVNWKHID-SQSLLGLTTTK-EGDVVICDSK---KVRQH 118 (135)
Q Consensus 46 l~~g~~~GPEdi~avd~-~G~lYTg~~-dG~I~ri~~~~~~~~~~~~t~-GRPpLGl~fd~-~G~LiVaDa~---~GLl~ 118 (135)
+....+.+|+++ ++|+ +|.+|.... +++|.+++.+....+.+...+ .+| -|+++|+ +|+||++|.. ..+.+
T Consensus 73 ~~~~~~~~p~~i-a~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P-~~i~vd~~~g~lyv~~~~~~~~~I~~ 150 (267)
T 1npe_A 73 IIRQDLGSPEGI-ALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNP-RGIVTDPVRGNLYWTDWNRDNPKIET 150 (267)
T ss_dssp EECTTCCCEEEE-EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSE-EEEEEETTTTEEEEEECCSSSCEEEE
T ss_pred EEECCCCCccEE-EEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCc-cEEEEeeCCCEEEEEECCCCCcEEEE
Confidence 333346799999 7996 578998765 689999987333334444444 577 9999998 6889999986 34667
Q ss_pred eCCCCeE
Q 032726 119 TNSQALI 125 (135)
Q Consensus 119 V~~~G~v 125 (135)
++.+|..
T Consensus 151 ~~~dg~~ 157 (267)
T 1npe_A 151 SHMDGTN 157 (267)
T ss_dssp EETTSCC
T ss_pred EecCCCC
Confidence 7877743
No 32
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.92 E-value=7.6e-05 Score=60.82 Aligned_cols=64 Identities=17% Similarity=0.238 Sum_probs=49.7
Q ss_pred CCcCCCceeeeeeCCCcEEEEecC--------------cEEEEEEcCCCc---------eeEEeeecCCCCCceeECC-C
Q 032726 49 GCVSHPEDVSVVVRKGALYTATND--------------GWVKYFILHNET---------LVNWKHIDSQSLLGLTTTK-E 104 (135)
Q Consensus 49 g~~~GPEdi~avd~~G~lYTg~~d--------------G~I~ri~~~~~~---------~~~~~~t~GRPpLGl~fd~-~ 104 (135)
+..+.|.++ ++++||.||.++-| |+|+|+++ +++ .+.|+ .+-|=|-||+||+ +
T Consensus 132 ~~~h~~~~l-~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~-dG~~p~~npf~~~~i~a-~G~rnp~Gla~d~~~ 208 (354)
T 3a9g_A 132 AYIHNGGRI-RFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDE-EGRPPADNPFPNSPIWS-YGHRNPQGIDWHRAS 208 (354)
T ss_dssp CSSCCCCCE-EECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECT-TSCCCTTSSSTTCCEEE-ECCSCCCEEEECTTT
T ss_pred CCCcCCceE-EECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcC-CCCCCCCCCCCCCcEEE-EccCCcceEEEeCCC
Confidence 445789999 79999999998643 89999977 453 35554 3555339999998 8
Q ss_pred CCEEEEeCCCc
Q 032726 105 GDVVICDSKKV 115 (135)
Q Consensus 105 G~LiVaDa~~G 115 (135)
|+||++|....
T Consensus 209 g~l~v~d~g~~ 219 (354)
T 3a9g_A 209 GVMVATEHGPV 219 (354)
T ss_dssp CCEEEEECCSS
T ss_pred CCEEEEecCCC
Confidence 99999998764
No 33
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.89 E-value=4.7e-05 Score=61.49 Aligned_cols=78 Identities=13% Similarity=0.050 Sum_probs=56.7
Q ss_pred EeccCCcCCCceeeeeeC-CCcEEEEecC--cEEEEEEcCCCceeEEeee-cCCCCCceeEC-CCCCEEEEeCCCc-eEE
Q 032726 45 KLGEGCVSHPEDVSVVVR-KGALYTATND--GWVKYFILHNETLVNWKHI-DSQSLLGLTTT-KEGDVVICDSKKV-RQH 118 (135)
Q Consensus 45 ~l~~g~~~GPEdi~avd~-~G~lYTg~~d--G~I~ri~~~~~~~~~~~~t-~GRPpLGl~fd-~~G~LiVaDa~~G-Ll~ 118 (135)
.+....+..|.++ ++|+ +|.+|..... ++|.|++.+....+.+... -.+| -||++| .+++||++|+..+ +.+
T Consensus 152 ~l~~~~l~~P~~i-avdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~P-nGla~d~~~~~lY~aD~~~~~I~~ 229 (349)
T 3v64_C 152 VLLWQSLEKPRAI-ALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWP-NGLTIDYAGRRMYWVDAKHHVIER 229 (349)
T ss_dssp EEECTTCSCEEEE-EEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCE-EEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCCCcceE-EEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCc-ceEEEeCCCCEEEEEECCCCEEEE
Confidence 3444557889999 7995 7889887654 8999998743333443333 3567 999999 5788999999887 666
Q ss_pred eCCCCe
Q 032726 119 TNSQAL 124 (135)
Q Consensus 119 V~~~G~ 124 (135)
++.+|.
T Consensus 230 ~~~dG~ 235 (349)
T 3v64_C 230 ANLDGS 235 (349)
T ss_dssp EETTSC
T ss_pred EeCCCC
Confidence 777764
No 34
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.88 E-value=0.00011 Score=58.14 Aligned_cols=80 Identities=11% Similarity=0.004 Sum_probs=58.9
Q ss_pred EeccCCcCCCceeeeee-CCCcEEEEe-cCcEEEEEEcCCCceeEEee-ecCCCCCceeECC-CCCEEEEeCCC--ceEE
Q 032726 45 KLGEGCVSHPEDVSVVV-RKGALYTAT-NDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTK-EGDVVICDSKK--VRQH 118 (135)
Q Consensus 45 ~l~~g~~~GPEdi~avd-~~G~lYTg~-~dG~I~ri~~~~~~~~~~~~-t~GRPpLGl~fd~-~G~LiVaDa~~--GLl~ 118 (135)
.+....+..|+++ ++| .+|++|... .+++|.+++.+....+.+.. ...+| -|+++|+ +|+||++|... .+.+
T Consensus 70 ~~~~~~~~~p~gl-avd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P-~~iavdp~~g~ly~~d~~~~~~I~~ 147 (316)
T 1ijq_A 70 TVISRDIQAPDGL-AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKP-RAIVVDPVHGFMYWTDWGTPAKIKK 147 (316)
T ss_dssp EEECSSCSCCCEE-EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCE-EEEEEETTTTEEEEEECSSSCEEEE
T ss_pred EEEeCCCCCcCEE-EEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCc-ceEEeCCCCCEEEEEccCCCCeEEE
Confidence 3333456899999 799 578999874 57899999874333444443 34688 9999995 78999999863 6888
Q ss_pred eCCCCeEE
Q 032726 119 TNSQALII 126 (135)
Q Consensus 119 V~~~G~v~ 126 (135)
++.+|...
T Consensus 148 ~~~dG~~~ 155 (316)
T 1ijq_A 148 GGLNGVDI 155 (316)
T ss_dssp EETTSCCE
T ss_pred EcCCCCCe
Confidence 88888654
No 35
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.85 E-value=7.9e-05 Score=57.48 Aligned_cols=75 Identities=5% Similarity=-0.039 Sum_probs=57.6
Q ss_pred CCCceeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeee-----cCCCCCceeECCCCCEEEEeC------------CC
Q 032726 52 SHPEDVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHI-----DSQSLLGLTTTKEGDVVICDS------------KK 114 (135)
Q Consensus 52 ~GPEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t-----~GRPpLGl~fd~~G~LiVaDa------------~~ 114 (135)
..|..+ +++++|++|.+. +..|.+++..++..+.+... ..|| -++++|++|++|+.+. ..
T Consensus 54 ~~~~~i-~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~-~di~~d~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 54 APVSSV-ALRQSGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRF-NDGKVDPAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp SCEEEE-EEBTTSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEE-EEEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred CceEEE-EECCCCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCC-CCEEECCCCCEEEecCCcccccccccCCCc
Confidence 468899 799999999998 56899998755655555432 2345 7799999999999883 24
Q ss_pred ceEEeCCCCeEEEEE
Q 032726 115 VRQHTNSQALIIVCV 129 (135)
Q Consensus 115 GLl~V~~~G~v~vl~ 129 (135)
+|++++++|.++.+.
T Consensus 131 ~l~~~d~~g~~~~~~ 145 (297)
T 3g4e_A 131 ALYSLFPDHHVKKYF 145 (297)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEEEECCCCEEEEe
Confidence 799999998877653
No 36
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.83 E-value=8e-05 Score=60.92 Aligned_cols=78 Identities=13% Similarity=0.065 Sum_probs=56.9
Q ss_pred EeccCCcCCCceeeeee-CCCcEEEEecC--cEEEEEEcCCCceeEEeeec-CCCCCceeEC-CCCCEEEEeCCCc-eEE
Q 032726 45 KLGEGCVSHPEDVSVVV-RKGALYTATND--GWVKYFILHNETLVNWKHID-SQSLLGLTTT-KEGDVVICDSKKV-RQH 118 (135)
Q Consensus 45 ~l~~g~~~GPEdi~avd-~~G~lYTg~~d--G~I~ri~~~~~~~~~~~~t~-GRPpLGl~fd-~~G~LiVaDa~~G-Ll~ 118 (135)
.+....+..|.++ ++| .+|.+|..... ++|.|++.+....+.+...+ .+| -||++| .+++||++|+..+ +.+
T Consensus 195 ~l~~~~l~~P~gi-avdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~P-nGlavd~~~~~lY~aD~~~~~I~~ 272 (386)
T 3v65_B 195 VLLWQSLEKPRAI-ALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWP-NGLTIDYAGRRMYWVDAKHHVIER 272 (386)
T ss_dssp EEECSSCSCEEEE-EEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCE-EEEEEEGGGTEEEEEETTTTEEEE
T ss_pred EeecCCCCCCcEE-EEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCe-eeEEEeCCCCEEEEEECCCCEEEE
Confidence 3444557889999 799 46789988754 79999987433334444433 457 999999 5789999999887 667
Q ss_pred eCCCCe
Q 032726 119 TNSQAL 124 (135)
Q Consensus 119 V~~~G~ 124 (135)
++.+|.
T Consensus 273 ~d~dG~ 278 (386)
T 3v65_B 273 ANLDGS 278 (386)
T ss_dssp ECTTSC
T ss_pred EeCCCC
Confidence 777763
No 37
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.83 E-value=0.0001 Score=61.44 Aligned_cols=72 Identities=13% Similarity=0.086 Sum_probs=54.0
Q ss_pred CcCCCceeeeeeC-CCcEEEEe-cCcEEEEEEcCCCceeEEeeec--CCCCCceeECCCCC-EEEEeCCCc-eEEeCCCC
Q 032726 50 CVSHPEDVSVVVR-KGALYTAT-NDGWVKYFILHNETLVNWKHID--SQSLLGLTTTKEGD-VVICDSKKV-RQHTNSQA 123 (135)
Q Consensus 50 ~~~GPEdi~avd~-~G~lYTg~-~dG~I~ri~~~~~~~~~~~~t~--GRPpLGl~fd~~G~-LiVaDa~~G-Ll~V~~~G 123 (135)
...+|.++ ++|+ +|.+|... .+++|+|++..++....+...+ ++| -||+||++|+ |||+|...+ +.+++.+|
T Consensus 224 ~~~~p~gi-avdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P-~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 224 KGQNCNGA-ETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWE-FHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp ECSSCCCE-EECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCC-EEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred cCCCceEE-EEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcc-eeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 35789999 7998 89999776 6799999987544443333333 468 9999999999 999998765 55555554
No 38
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.78 E-value=0.00011 Score=61.22 Aligned_cols=80 Identities=13% Similarity=0.099 Sum_probs=59.7
Q ss_pred ccccceEeccCCcCCCceeeeeeCCCcEEEEec-CcEEEEEEcCCCceeEEee-------ecCCCCCceeECC----CCC
Q 032726 39 SMKDLIKLGEGCVSHPEDVSVVVRKGALYTATN-DGWVKYFILHNETLVNWKH-------IDSQSLLGLTTTK----EGD 106 (135)
Q Consensus 39 ~L~~~e~l~~g~~~GPEdi~avd~~G~lYTg~~-dG~I~ri~~~~~~~~~~~~-------t~GRPpLGl~fd~----~G~ 106 (135)
...+++.+..| +..|.++ ++++||++|.+.+ .|+|++++..++..+.+.. -.+.| |||+|++ +|.
T Consensus 20 ~~~~~~~va~g-L~~P~~i-a~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~Gl-lGia~~Pdf~~~g~ 96 (347)
T 3das_A 20 SVKVLRTVATG-LNSPWGL-APLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGL-LGIALSPDYASDHM 96 (347)
T ss_dssp CEEEEEEEECC-CSSEEEE-EECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSE-EEEEECTTHHHHCE
T ss_pred CCceeEEeecC-CCCceEE-EEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCc-eeeEeccccccCCE
Confidence 35677888887 7899999 7999999999998 9999999764444433321 13556 9999997 589
Q ss_pred EEEEeC---CCceEEeCC
Q 032726 107 VVICDS---KKVRQHTNS 121 (135)
Q Consensus 107 LiVaDa---~~GLl~V~~ 121 (135)
|||+.+ ...+.+...
T Consensus 97 lYv~yt~~~~~~v~R~~~ 114 (347)
T 3das_A 97 VYAYFTSASDNRIVRMLY 114 (347)
T ss_dssp EEEEEECSSSEEEEEEEB
T ss_pred EEEEEecCCCCEEEEEEe
Confidence 999864 334666653
No 39
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.77 E-value=8.9e-05 Score=61.16 Aligned_cols=77 Identities=19% Similarity=0.100 Sum_probs=56.1
Q ss_pred eccCCcCCCceeeeeeC-CCcEEEEec--CcEEEEEEcCCCceeEEeeec-CCCCCceeEC-CCCCEEEEeCCCc-eEEe
Q 032726 46 LGEGCVSHPEDVSVVVR-KGALYTATN--DGWVKYFILHNETLVNWKHID-SQSLLGLTTT-KEGDVVICDSKKV-RQHT 119 (135)
Q Consensus 46 l~~g~~~GPEdi~avd~-~G~lYTg~~--dG~I~ri~~~~~~~~~~~~t~-GRPpLGl~fd-~~G~LiVaDa~~G-Ll~V 119 (135)
+....+..|.++ ++|+ +|.+|-... .++|.|++.+....+.+...+ .+| -||++| .+++||++|+..+ +.++
T Consensus 196 l~~~~~~~P~~i-avdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P-~glavd~~~~~lY~aD~~~~~I~~~ 273 (400)
T 3p5b_L 196 LFRENGSKPRAI-VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP-NGITLDLLSGRLYWVDSKLHSISSI 273 (400)
T ss_dssp EEECSSCCEEEE-EEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCE-EEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEeCCCCCcceE-EEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCce-EEEEEEeCCCEEEEEECCCCEEEEE
Confidence 444457789999 7995 788998874 389999987433344444433 678 999999 5678999999866 6666
Q ss_pred CCCCe
Q 032726 120 NSQAL 124 (135)
Q Consensus 120 ~~~G~ 124 (135)
+.+|.
T Consensus 274 d~dG~ 278 (400)
T 3p5b_L 274 DVNGG 278 (400)
T ss_dssp ETTSC
T ss_pred eCCCC
Confidence 77763
No 40
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.76 E-value=0.00021 Score=54.71 Aligned_cols=75 Identities=9% Similarity=0.094 Sum_probs=55.9
Q ss_pred CCCceeeeeeCCCcEEEEecC-----cEEEEEEcCCCceeEE-e--eecCCCCCceeECCCCCEEEEeCC-------Cce
Q 032726 52 SHPEDVSVVVRKGALYTATND-----GWVKYFILHNETLVNW-K--HIDSQSLLGLTTTKEGDVVICDSK-------KVR 116 (135)
Q Consensus 52 ~GPEdi~avd~~G~lYTg~~d-----G~I~ri~~~~~~~~~~-~--~t~GRPpLGl~fd~~G~LiVaDa~-------~GL 116 (135)
..|.++ ++|++|++|.+..+ +.|++++..++..+.+ . ..+.+| -++.+|++|++||++.. .+|
T Consensus 87 ~~~~~i-~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~-~~i~~d~~g~l~v~~~~~~~~~~~~~l 164 (333)
T 2dg1_A 87 ANPAAI-KIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCI-DDMVFDSKGGFYFTDFRGYSTNPLGGV 164 (333)
T ss_dssp SSEEEE-EECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCE-EEEEECTTSCEEEEECCCBTTBCCEEE
T ss_pred CCcceE-EECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcc-cceEECCCCCEEEEeccccccCCCceE
Confidence 568899 79999999998765 4999997644443322 1 123456 89999999999999875 679
Q ss_pred EEeCCC-CeEEEE
Q 032726 117 QHTNSQ-ALIIVC 128 (135)
Q Consensus 117 l~V~~~-G~v~vl 128 (135)
++++++ +.++.+
T Consensus 165 ~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 165 YYVSPDFRTVTPI 177 (333)
T ss_dssp EEECTTSCCEEEE
T ss_pred EEEeCCCCEEEEe
Confidence 999986 466554
No 41
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.73 E-value=0.00011 Score=58.10 Aligned_cols=75 Identities=12% Similarity=0.076 Sum_probs=55.8
Q ss_pred CCCceeeeeeCCC-cEEEEecCc-EEEEEEcC---CCc---------eeEEeeecCCCCCceeECCCCCEEEEeCCCc-e
Q 032726 52 SHPEDVSVVVRKG-ALYTATNDG-WVKYFILH---NET---------LVNWKHIDSQSLLGLTTTKEGDVVICDSKKV-R 116 (135)
Q Consensus 52 ~GPEdi~avd~~G-~lYTg~~dG-~I~ri~~~---~~~---------~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G-L 116 (135)
.||..+ +++++| .+|.+..++ +|++++.. ++. .+.+. ..|.| -||++|++|+|||+|...+ +
T Consensus 195 ~~~~gi-a~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g-~~g~p-dgia~d~~G~l~va~~~~~~V 271 (343)
T 2qe8_A 195 LGVNGI-VLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS-EKPIC-DGISIDKDHNIYVGDLAHSAI 271 (343)
T ss_dssp CCEEEE-EECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE-ECCSC-SCEEECTTCCEEEEEGGGTEE
T ss_pred ccccee-EeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc-cCCCC-ceEEECCCCCEEEEccCCCeE
Confidence 478999 799998 599987776 99999641 111 01111 23577 9999999999999998765 7
Q ss_pred EEeCC-CCeEEEEE
Q 032726 117 QHTNS-QALIIVCV 129 (135)
Q Consensus 117 l~V~~-~G~v~vl~ 129 (135)
.++++ +|++.+++
T Consensus 272 ~~~d~~~G~~~~~~ 285 (343)
T 2qe8_A 272 GVITSADRAYKLLV 285 (343)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEECCCCCEEEEE
Confidence 88898 89877664
No 42
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.70 E-value=0.00018 Score=56.90 Aligned_cols=77 Identities=19% Similarity=0.097 Sum_probs=55.6
Q ss_pred EeccCCcCCCceeeeeeC-CCcEEEEecC--cEEEEEEcCCCceeEEee-ecCCCCCceeECC-CCCEEEEeCCCc-eEE
Q 032726 45 KLGEGCVSHPEDVSVVVR-KGALYTATND--GWVKYFILHNETLVNWKH-IDSQSLLGLTTTK-EGDVVICDSKKV-RQH 118 (135)
Q Consensus 45 ~l~~g~~~GPEdi~avd~-~G~lYTg~~d--G~I~ri~~~~~~~~~~~~-t~GRPpLGl~fd~-~G~LiVaDa~~G-Ll~ 118 (135)
.+....+..|.++ ++|+ +|.+|....+ ++|.|++.+....+.+.. .-..| -||++|. +++||++|+..+ +.+
T Consensus 113 ~~~~~~~~~P~~i-avdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P-~gla~d~~~~~lY~~D~~~~~I~~ 190 (316)
T 1ijq_A 113 TLFRENGSKPRAI-VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP-NGITLDLLSGRLYWVDSKLHSISS 190 (316)
T ss_dssp EEEECTTCCEEEE-EEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCE-EEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEECCCCCcceE-EeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCc-eEEEEeccCCEEEEEECCCCeEEE
Confidence 3444456899999 7995 7889988764 799999873333344433 34577 9999995 578999998875 666
Q ss_pred eCCCC
Q 032726 119 TNSQA 123 (135)
Q Consensus 119 V~~~G 123 (135)
++.+|
T Consensus 191 ~d~dg 195 (316)
T 1ijq_A 191 IDVNG 195 (316)
T ss_dssp EETTS
T ss_pred EecCC
Confidence 77776
No 43
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.69 E-value=0.00025 Score=55.78 Aligned_cols=72 Identities=11% Similarity=0.052 Sum_probs=56.9
Q ss_pred CCCceeeeeeCCCcEEEEe--cCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCC-----------CceEE
Q 032726 52 SHPEDVSVVVRKGALYTAT--NDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSK-----------KVRQH 118 (135)
Q Consensus 52 ~GPEdi~avd~~G~lYTg~--~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~-----------~GLl~ 118 (135)
..|+.+ ++ .+|++|.+. .+++|..|+..++.......++..| -++++|++|++||++.. ..+.+
T Consensus 131 ~~p~~i-~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p-~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~ 207 (328)
T 3dsm_A 131 GSTEQM-VQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQP-TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYR 207 (328)
T ss_dssp CBCCCE-EE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCB-CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEE
T ss_pred CCcceE-EE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCc-cceEEcCCCCEEEEECCCccCCccccCCceEEE
Confidence 389999 67 478999998 4899999987655554444567788 99999999999998865 36999
Q ss_pred eCCC-CeEE
Q 032726 119 TNSQ-ALII 126 (135)
Q Consensus 119 V~~~-G~v~ 126 (135)
+|++ ++++
T Consensus 208 id~~t~~v~ 216 (328)
T 3dsm_A 208 IDAETFTVE 216 (328)
T ss_dssp EETTTTEEE
T ss_pred EECCCCeEE
Confidence 9974 6654
No 44
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.69 E-value=0.00024 Score=53.61 Aligned_cols=78 Identities=8% Similarity=-0.048 Sum_probs=56.9
Q ss_pred eccCCcCCCceeeeeeCC-CcEEEEec-CcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCC-CceEEeCCC
Q 032726 46 LGEGCVSHPEDVSVVVRK-GALYTATN-DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSK-KVRQHTNSQ 122 (135)
Q Consensus 46 l~~g~~~GPEdi~avd~~-G~lYTg~~-dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~-~GLl~V~~~ 122 (135)
+....+..|..+ ++|++ +.+|.+.. .++|.+++......+.+....+.| -||++| +++|||+|.. ..+.+++++
T Consensus 161 ~~~~~~~~P~gi-a~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P-~gi~~d-~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 161 LAQDNLGLPNGL-TFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYP-FAVTSY-GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp EECTTCSCEEEE-EEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSE-EEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred EEECCCCCCcEE-EEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCc-eEEEEe-CCEEEEEECCCCeEEEEeCC
Confidence 333446789999 79975 68998876 479999987433334444556778 999998 6899999976 567888875
Q ss_pred -CeEE
Q 032726 123 -ALII 126 (135)
Q Consensus 123 -G~v~ 126 (135)
|++.
T Consensus 238 ~g~~~ 242 (267)
T 1npe_A 238 ISKEM 242 (267)
T ss_dssp TTEEE
T ss_pred CCCce
Confidence 7654
No 45
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.68 E-value=0.0003 Score=54.17 Aligned_cols=84 Identities=12% Similarity=-0.035 Sum_probs=62.0
Q ss_pred eEeccCCcCCCceeeeeeC-CCcEE-EEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCCceEEeCC
Q 032726 44 IKLGEGCVSHPEDVSVVVR-KGALY-TATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTNS 121 (135)
Q Consensus 44 e~l~~g~~~GPEdi~avd~-~G~lY-Tg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~~ 121 (135)
+.+......=+|.. +.++ +|.+| +...+++|+|+++.++..+.+ ...++| -+++++++|+|||+. ..|+.++++
T Consensus 5 ~~~~~~~~~~~Egp-~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~~~~-~~i~~~~dG~l~v~~-~~~l~~~d~ 80 (297)
T 3g4e_A 5 ECVLPENCRCGESP-VWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV-TMDAPV-SSVALRQSGGYVATI-GTKFCALNW 80 (297)
T ss_dssp EEEECCCCSBEEEE-EEETTTTEEEEEETTTTEEEEEETTTCCEEEE-ECSSCE-EEEEEBTTSSEEEEE-TTEEEEEET
T ss_pred EEEeccCCccccCC-eEECCCCEEEEEECCCCEEEEEECCCCcEEEE-eCCCce-EEEEECCCCCEEEEE-CCeEEEEEC
Confidence 44444445678999 6886 56655 556789999998754444443 456788 999999999999998 679999997
Q ss_pred C-CeEEEEEEE
Q 032726 122 Q-ALIIVCVCV 131 (135)
Q Consensus 122 ~-G~v~vl~~~ 131 (135)
+ |.++++.-.
T Consensus 81 ~~g~~~~~~~~ 91 (297)
T 3g4e_A 81 KEQSAVVLATV 91 (297)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCcEEEEEec
Confidence 4 888877643
No 46
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.67 E-value=7.4e-05 Score=60.16 Aligned_cols=80 Identities=15% Similarity=0.087 Sum_probs=59.7
Q ss_pred cccccceEeccCCcCCCceeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeeecCCC--------CCceeECCCCCEEE
Q 032726 38 SSMKDLIKLGEGCVSHPEDVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHIDSQS--------LLGLTTTKEGDVVI 109 (135)
Q Consensus 38 ~~L~~~e~l~~g~~~GPEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRP--------pLGl~fd~~G~LiV 109 (135)
+-+.++.+++.+....-.++ +++++|.||.. .+|.++|+++++...+.|..+ .+- --.+.||++|+||+
T Consensus 27 ~~~~~a~~iG~~gw~~~~~l-af~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~F~a~~fD~~G~LYa 103 (236)
T 1tl2_A 27 NWLARATLIGKGGWSNFKFL-FLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWNQFQFLFFDPNGYLYA 103 (236)
T ss_dssp CHHHHSEEEESSSCTTCSEE-EECTTSCEEEE-ETTEEEEESCCCSTTCCHHHH-CEEEECSCGGGCSEEEECTTSCEEE
T ss_pred chhhhccccCccccccceeE-EECCCccEEEE-eCCeEEEECCCCCCccccccc-ccEecccccccceEEEECCCCCEEE
Confidence 35689999999878899999 79999999999 999999998755433333221 111 02577999999999
Q ss_pred EeCCCceEEeCC
Q 032726 110 CDSKKVRQHTNS 121 (135)
Q Consensus 110 aDa~~GLl~V~~ 121 (135)
. ..-=|+++++
T Consensus 104 v-~dG~iyr~~p 114 (236)
T 1tl2_A 104 V-SKDKLYKASP 114 (236)
T ss_dssp E-ETTEEEEESC
T ss_pred e-CCCEEEEeCC
Confidence 8 4433558886
No 47
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.67 E-value=0.00019 Score=57.69 Aligned_cols=77 Identities=14% Similarity=0.044 Sum_probs=56.3
Q ss_pred EeccCCcCCCceeeeeeC-CCcEEEEec--CcEEEEEEcCCCceeEEeeec-CCCCCceeECC-CCCEEEEeCCCc-eEE
Q 032726 45 KLGEGCVSHPEDVSVVVR-KGALYTATN--DGWVKYFILHNETLVNWKHID-SQSLLGLTTTK-EGDVVICDSKKV-RQH 118 (135)
Q Consensus 45 ~l~~g~~~GPEdi~avd~-~G~lYTg~~--dG~I~ri~~~~~~~~~~~~t~-GRPpLGl~fd~-~G~LiVaDa~~G-Ll~ 118 (135)
.+....+..|.++ ++|+ +|.+|-... .++|.|++.+....+.+...+ ..| -||++|. +++||++|+..+ +.+
T Consensus 115 ~l~~~~~~~P~gi-avdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~P-nglavd~~~~~lY~aD~~~~~I~~ 192 (318)
T 3sov_A 115 VLFWQELDQPRAI-ALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWP-NGLTLDYEEQKLYWADAKLNFIHK 192 (318)
T ss_dssp EEECSSCSSEEEE-EEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCE-EEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCCCccEE-EEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCc-cEEEEeccCCEEEEEECCCCEEEE
Confidence 3444567889999 7995 689999884 689999987333334443333 567 9999996 678999999877 556
Q ss_pred eCCCC
Q 032726 119 TNSQA 123 (135)
Q Consensus 119 V~~~G 123 (135)
++.+|
T Consensus 193 ~d~dG 197 (318)
T 3sov_A 193 SNLDG 197 (318)
T ss_dssp EETTS
T ss_pred EcCCC
Confidence 67775
No 48
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.66 E-value=0.00029 Score=53.34 Aligned_cols=70 Identities=10% Similarity=0.029 Sum_probs=52.5
Q ss_pred CceeeeeeCCCcEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCceEEeCCCCeEE
Q 032726 54 PEDVSVVVRKGALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTNSQALII 126 (135)
Q Consensus 54 PEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~~~G~v~ 126 (135)
..++ ++|.+|.+|.|+.+|.|++++. ++.. ..+..-.+.+ -.+.+|++|+|||+...-||.+++++|+..
T Consensus 217 ~~~~-~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~-~~~~~~~~g~l~v~t~~ggl~~~d~~g~~~ 287 (330)
T 3hxj_A 217 VTRP-AISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIE-SSPVIGNTDTIYFGSYDGHLYAINPDGTEK 287 (330)
T ss_dssp CSCC-EECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCCC-SCCEECTTSCEEEECTTCEEEEECTTSCEE
T ss_pred eece-EECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCcc-ccceEcCCCeEEEecCCCCEEEECCCCcEE
Confidence 4567 6888999999999999999964 4432 2222222333 567888899999999888999999988753
No 49
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.66 E-value=8.7e-05 Score=60.24 Aligned_cols=61 Identities=13% Similarity=0.167 Sum_probs=47.6
Q ss_pred cCCCceeeeeeCCCcEEEEecC--------------cEEEEEEcCCCc--------------eeEEeeecCCCCCceeEC
Q 032726 51 VSHPEDVSVVVRKGALYTATND--------------GWVKYFILHNET--------------LVNWKHIDSQSLLGLTTT 102 (135)
Q Consensus 51 ~~GPEdi~avd~~G~lYTg~~d--------------G~I~ri~~~~~~--------------~~~~~~t~GRPpLGl~fd 102 (135)
.+.|.++ ++++||.||.++-| |+|+||++ +++ .+.|+ .+-|=|-||+||
T Consensus 129 ~h~~~~l-~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~-dG~~p~~npf~~~~~~~~~i~a-~G~rnp~gl~~d 205 (353)
T 2g8s_A 129 NHFGGRL-VFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTD-QGEIPDDNPFIKESGVRAEIWS-YGIRNPQGMAMN 205 (353)
T ss_dssp SCCCCCE-EECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEET-TSCCCTTCTTTTSTTSCTTEEE-ECCSEEEEEEEE
T ss_pred cccCccE-EECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECC-CCCCCCCCCCcCCCCCCccEEE-EcCcCccceEEE
Confidence 3558899 79999999999754 79999987 443 34454 466733999999
Q ss_pred C-CCCEEEEeCCC
Q 032726 103 K-EGDVVICDSKK 114 (135)
Q Consensus 103 ~-~G~LiVaDa~~ 114 (135)
+ +|+||++|...
T Consensus 206 ~~~g~l~~~d~g~ 218 (353)
T 2g8s_A 206 PWSNALWLNEHGP 218 (353)
T ss_dssp TTTTEEEEEEECS
T ss_pred CCCCCEEEEecCC
Confidence 8 89999999863
No 50
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.63 E-value=0.00019 Score=63.10 Aligned_cols=79 Identities=18% Similarity=0.094 Sum_probs=59.1
Q ss_pred eEeccCCcCCCceeeeeeC-CCcEEEEec--CcEEEEEEcCCCceeEEeee-cCCCCCceeECC-CCCEEEEeCCCc-eE
Q 032726 44 IKLGEGCVSHPEDVSVVVR-KGALYTATN--DGWVKYFILHNETLVNWKHI-DSQSLLGLTTTK-EGDVVICDSKKV-RQ 117 (135)
Q Consensus 44 e~l~~g~~~GPEdi~avd~-~G~lYTg~~--dG~I~ri~~~~~~~~~~~~t-~GRPpLGl~fd~-~G~LiVaDa~~G-Ll 117 (135)
+.+....+..|.++ ++|+ +|.+|-... .++|.|...++...+.+... -.+| -||++|. +++||+||+..+ +.
T Consensus 427 ~~l~~~~l~~P~~i-avdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P-~GlalD~~~~~LY~aD~~~~~I~ 504 (619)
T 3s94_A 427 KILISEDLEEPRAI-VLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWP-NGLALDYDEGKIYWGDAKTDKIE 504 (619)
T ss_dssp EEEECTTCCSEEEE-EEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCE-EEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEECCCCCeeeE-EEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCC-eeeEEcccCCEEEEEECCCCEEE
Confidence 34555568899999 7996 599998875 48999998743334444433 4678 9999995 789999999988 66
Q ss_pred EeCCCCe
Q 032726 118 HTNSQAL 124 (135)
Q Consensus 118 ~V~~~G~ 124 (135)
+++.+|.
T Consensus 505 ~~~~dG~ 511 (619)
T 3s94_A 505 VMNTDGT 511 (619)
T ss_dssp EEESSSC
T ss_pred EEecCCC
Confidence 7777764
No 51
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.59 E-value=0.00022 Score=59.68 Aligned_cols=72 Identities=14% Similarity=0.135 Sum_probs=52.1
Q ss_pred CcCCCceeeeeeC-CCcEEEEe-cCcEEEEEEcCCCce-eEEeeecCCC-CCceeECCCCC-EEEEeCCCc-eEEeCCC
Q 032726 50 CVSHPEDVSVVVR-KGALYTAT-NDGWVKYFILHNETL-VNWKHIDSQS-LLGLTTTKEGD-VVICDSKKV-RQHTNSQ 122 (135)
Q Consensus 50 ~~~GPEdi~avd~-~G~lYTg~-~dG~I~ri~~~~~~~-~~~~~t~GRP-pLGl~fd~~G~-LiVaDa~~G-Ll~V~~~ 122 (135)
....|.++ ++|+ +|++|.+. .+++|+|+++.++.. +.+...+..+ +.||+||++|+ |||+|...+ +++++.+
T Consensus 226 ~~~~P~gi-avd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 226 NARGAKTC-AVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp ECSSBCCC-EECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred ccCCCCEE-EEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 35789999 7998 89999665 678999998754554 3443444333 15699999998 999998755 5555543
No 52
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.58 E-value=0.00039 Score=58.85 Aligned_cols=69 Identities=7% Similarity=0.064 Sum_probs=52.3
Q ss_pred cceEeccCCcCCCceeeeeeCCCcEEEEecCc-EEEEEEcCCCceeEEeee---------cCCCCCceeECC----CCCE
Q 032726 42 DLIKLGEGCVSHPEDVSVVVRKGALYTATNDG-WVKYFILHNETLVNWKHI---------DSQSLLGLTTTK----EGDV 107 (135)
Q Consensus 42 ~~e~l~~g~~~GPEdi~avd~~G~lYTg~~dG-~I~ri~~~~~~~~~~~~t---------~GRPpLGl~fd~----~G~L 107 (135)
+++.+..+ +..|-++ +++++|++|.+...| +|++++..++..+.+..+ .|-+ |||+|++ +|.|
T Consensus 18 ~~~~~a~~-l~~P~~~-a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gl-lgia~~Pdf~~~g~l 94 (454)
T 1cru_A 18 DKKVILSN-LNKPHAL-LWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGL-LGFAFHPDFKNNPYI 94 (454)
T ss_dssp CEEEEECC-CSSEEEE-EECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSE-EEEEECTTTTTSCEE
T ss_pred EEEEEECC-CCCceEE-EEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCce-eEEEECCCcCcCCEE
Confidence 34666665 7899999 799999999999986 899997644554433211 2445 8999997 7899
Q ss_pred EEEeCC
Q 032726 108 VICDSK 113 (135)
Q Consensus 108 iVaDa~ 113 (135)
||+++.
T Consensus 95 Yv~~s~ 100 (454)
T 1cru_A 95 YISGTF 100 (454)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 999974
No 53
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.56 E-value=0.00028 Score=62.12 Aligned_cols=77 Identities=12% Similarity=0.038 Sum_probs=58.8
Q ss_pred EeccCCcCCCceeeeeeC-CCcEEEEec--CcEEEEEEcCCCceeEEeeecCCCCCceeECC-CCCEEEEeCCCc-eEEe
Q 032726 45 KLGEGCVSHPEDVSVVVR-KGALYTATN--DGWVKYFILHNETLVNWKHIDSQSLLGLTTTK-EGDVVICDSKKV-RQHT 119 (135)
Q Consensus 45 ~l~~g~~~GPEdi~avd~-~G~lYTg~~--dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~-~G~LiVaDa~~G-Ll~V 119 (135)
.+....+..|.++ ++|+ +|.+|-... .++|.|+..+....+.+.....+| -||++|. +++||++|+..+ +.++
T Consensus 116 ~l~~~~l~~P~~i-avdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P-~GlalD~~~~~LY~aD~~~~~I~~~ 193 (628)
T 4a0p_A 116 VLVWKDLDSPRAL-ALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRA-NGLTIDYAKRRLYWTDLDTNLIESS 193 (628)
T ss_dssp EEECSSCCCEEEE-EEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSE-EEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEeCCCCCcccE-EEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCc-ceEEEccccCEEEEEECCCCEEEEE
Confidence 3444567899999 7995 799999874 589999987444455555556788 9999997 578999999876 4556
Q ss_pred CCCC
Q 032726 120 NSQA 123 (135)
Q Consensus 120 ~~~G 123 (135)
+.+|
T Consensus 194 d~dG 197 (628)
T 4a0p_A 194 NMLG 197 (628)
T ss_dssp ETTS
T ss_pred cCCC
Confidence 6665
No 54
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.55 E-value=0.00042 Score=54.48 Aligned_cols=73 Identities=5% Similarity=0.028 Sum_probs=56.5
Q ss_pred cCCCceeeeeeCCCcEEEEe-cCcEEEEEEcCCCceeEEeeecC------CCCCceeECCCCCEEEEeC--CCceEEeCC
Q 032726 51 VSHPEDVSVVVRKGALYTAT-NDGWVKYFILHNETLVNWKHIDS------QSLLGLTTTKEGDVVICDS--KKVRQHTNS 121 (135)
Q Consensus 51 ~~GPEdi~avd~~G~lYTg~-~dG~I~ri~~~~~~~~~~~~t~G------RPpLGl~fd~~G~LiVaDa--~~GLl~V~~ 121 (135)
...|+.+ +++++|++|.+. .+++|.+|+..++.......++. .| -||++ .++.|||++. ...+..+|.
T Consensus 83 ~~~p~~i-~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p-~~i~~-~~~~lyv~~~~~~~~v~viD~ 159 (328)
T 3dsm_A 83 FTSPRYI-HFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGST-EQMVQ-YGKYVYVNCWSYQNRILKIDT 159 (328)
T ss_dssp CSSEEEE-EEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBC-CCEEE-ETTEEEEEECTTCCEEEEEET
T ss_pred CCCCcEE-EEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCc-ceEEE-ECCEEEEEcCCCCCEEEEEEC
Confidence 4789999 698888999999 89999999875555443345555 77 99999 5778999994 566888886
Q ss_pred C-CeEE
Q 032726 122 Q-ALII 126 (135)
Q Consensus 122 ~-G~v~ 126 (135)
+ +++.
T Consensus 160 ~t~~~~ 165 (328)
T 3dsm_A 160 ETDKVV 165 (328)
T ss_dssp TTTEEE
T ss_pred CCCeEE
Confidence 4 6544
No 55
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.54 E-value=0.00015 Score=61.43 Aligned_cols=63 Identities=14% Similarity=0.179 Sum_probs=48.7
Q ss_pred CCcCCCceeeeeeCCCcEEEEec---------------------------------CcEEEEEEcCCCc-----------
Q 032726 49 GCVSHPEDVSVVVRKGALYTATN---------------------------------DGWVKYFILHNET----------- 84 (135)
Q Consensus 49 g~~~GPEdi~avd~~G~lYTg~~---------------------------------dG~I~ri~~~~~~----------- 84 (135)
+..+.+-.+ ++++||.||.++- .|+|+||++ +++
T Consensus 141 ~~~H~~~~l-~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~-dG~ip~~Npf~~~~ 218 (454)
T 1cru_A 141 SKDHQSGRL-VIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNL-DGSIPKDNPSFNGV 218 (454)
T ss_dssp CSSCCEEEE-EECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECT-TSCCCTTCCEETTE
T ss_pred CCCCCCCeE-eECCCCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeC-CCCCCCCCCCCCCC
Confidence 345789999 7999999999854 389999987 554
Q ss_pred -eeEEeeecCCCCCceeECCCCCEEEEeCCC
Q 032726 85 -LVNWKHIDSQSLLGLTTTKEGDVVICDSKK 114 (135)
Q Consensus 85 -~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~ 114 (135)
.+.|+ .+-|=|-||+||++|+||++|...
T Consensus 219 ~~ei~a-~G~RNp~gla~dp~G~L~~~d~g~ 248 (454)
T 1cru_A 219 VSHIYT-LGHRNPQGLAFTPNGKLLQSEQGP 248 (454)
T ss_dssp ECSEEE-BCCSEEEEEEECTTSCEEEEEECS
T ss_pred cceEEE-ECCCCcceEEECCCCCEEEEecCC
Confidence 35554 355644999999999999999643
No 56
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.53 E-value=0.0003 Score=64.01 Aligned_cols=78 Identities=19% Similarity=0.103 Sum_probs=57.3
Q ss_pred EeccCCcCCCceeeeeeC-CCcEEEEecC--cEEEEEEcCCCceeEEeeec-CCCCCceeEC-CCCCEEEEeCCCc-eEE
Q 032726 45 KLGEGCVSHPEDVSVVVR-KGALYTATND--GWVKYFILHNETLVNWKHID-SQSLLGLTTT-KEGDVVICDSKKV-RQH 118 (135)
Q Consensus 45 ~l~~g~~~GPEdi~avd~-~G~lYTg~~d--G~I~ri~~~~~~~~~~~~t~-GRPpLGl~fd-~~G~LiVaDa~~G-Ll~ 118 (135)
.+....+..|.+| ++|+ +|.||-.... ++|.|+..+......+.... .+| -||++| .+|+||++|+... +.+
T Consensus 507 ~l~~~~l~~P~gI-aVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P-~GLavD~~~~~LYwaD~~~~~I~~ 584 (791)
T 3m0c_C 507 TLFRENGSKPRAI-VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP-NGITLDLLSGRLYWVDSKLHSISS 584 (791)
T ss_dssp EEEECTTCCEEEE-EEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCE-EEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCCCcceE-EEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCc-eEEEEecCCCeEEEEeCCCCcEEE
Confidence 3444457789999 7995 5899998743 79999987433344444443 578 999999 6789999999876 666
Q ss_pred eCCCCe
Q 032726 119 TNSQAL 124 (135)
Q Consensus 119 V~~~G~ 124 (135)
++.+|.
T Consensus 585 ~d~dG~ 590 (791)
T 3m0c_C 585 IDVNGG 590 (791)
T ss_dssp EETTSC
T ss_pred EecCCC
Confidence 777763
No 57
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.53 E-value=0.00029 Score=58.60 Aligned_cols=73 Identities=10% Similarity=0.115 Sum_probs=53.3
Q ss_pred ccccceEecc----CCcCCCceeeeeeCCCcEEEEec--------------CcEEEEEEcCCCc---------eeEEeee
Q 032726 39 SMKDLIKLGE----GCVSHPEDVSVVVRKGALYTATN--------------DGWVKYFILHNET---------LVNWKHI 91 (135)
Q Consensus 39 ~L~~~e~l~~----g~~~GPEdi~avd~~G~lYTg~~--------------dG~I~ri~~~~~~---------~~~~~~t 91 (135)
.+.+.+.|.. +..+.+-++ ++++||.||.++- .|+|+||++ +++ .+.|+.
T Consensus 123 ~~~~~~~i~~~~p~~~~H~g~~l-~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~-dG~ip~~nPf~~~~i~a~- 199 (347)
T 3das_A 123 QLGAPDTVFRGIPKGVIHNGGRI-AFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTP-DGEPAPGNPFPGSPVYSY- 199 (347)
T ss_dssp CBCCCEEEEEEECCCSSCCCCCE-EECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECT-TSSBCTTCSSTTCCEEEB-
T ss_pred cCCCcEEEEEcCCCCCCccCccc-cCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeC-CCCccCCCCCCCCeEEee-
Confidence 4545555443 345777889 7999999999963 599999987 443 344543
Q ss_pred cCCCCCceeECCCCCEEEEeCCC
Q 032726 92 DSQSLLGLTTTKEGDVVICDSKK 114 (135)
Q Consensus 92 ~GRPpLGl~fd~~G~LiVaDa~~ 114 (135)
|-|=|.||+||++|+||++|...
T Consensus 200 G~RNp~Gla~dp~G~L~~~d~g~ 222 (347)
T 3das_A 200 GHRNVQGLAWDDKQRLFASEFGQ 222 (347)
T ss_dssp CCSBCCEEEECTTCCEEEEECCS
T ss_pred CCCCcceEEECCCCCEEEEecCC
Confidence 55534999999999999999754
No 58
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.52 E-value=0.00016 Score=58.61 Aligned_cols=68 Identities=12% Similarity=0.150 Sum_probs=51.1
Q ss_pred ceEeccCCcCCCceeeeeeCCCc-EEEEecCcEEEEEEcCCCce-eEEe-------eecCCCCCceeECC----CCCEEE
Q 032726 43 LIKLGEGCVSHPEDVSVVVRKGA-LYTATNDGWVKYFILHNETL-VNWK-------HIDSQSLLGLTTTK----EGDVVI 109 (135)
Q Consensus 43 ~e~l~~g~~~GPEdi~avd~~G~-lYTg~~dG~I~ri~~~~~~~-~~~~-------~t~GRPpLGl~fd~----~G~LiV 109 (135)
++.+.. .+..|.++ +++++|+ +|.+..+|+|++++. ++.. +.+. .-.+.| +||++++ +|.|||
T Consensus 10 ~~~va~-~l~~P~~i-~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~-~gia~~pdf~~~g~lYv 85 (353)
T 2g8s_A 10 VEVLQD-KLDHPWAL-AFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGL-LDVVLAPDFAQSRRIWL 85 (353)
T ss_dssp EEEEEE-EESSEEEE-EECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSE-EEEEECTTHHHHCEEEE
T ss_pred EEEEEC-CCCCcEEE-EEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCc-eeEEECCCCCCCCEEEE
Confidence 455555 37899999 7999999 999999999999975 4432 1121 113456 9999997 689999
Q ss_pred EeCCC
Q 032726 110 CDSKK 114 (135)
Q Consensus 110 aDa~~ 114 (135)
++...
T Consensus 86 ~~~~~ 90 (353)
T 2g8s_A 86 SYSEV 90 (353)
T ss_dssp EEEEE
T ss_pred EEeCC
Confidence 98763
No 59
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.48 E-value=0.00059 Score=53.59 Aligned_cols=84 Identities=8% Similarity=-0.008 Sum_probs=63.3
Q ss_pred cceEeccCCcCCCceeeeeeCC-Cc-EEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCCceEEe
Q 032726 42 DLIKLGEGCVSHPEDVSVVVRK-GA-LYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHT 119 (135)
Q Consensus 42 ~~e~l~~g~~~GPEdi~avd~~-G~-lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V 119 (135)
++|.+......-+|.. +++++ +. +|++..++.|++++..++....+. ..++| -++.++++|+++|++ ..||.++
T Consensus 39 ~~~~~~~~~~~~~egp-~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v-~~i~~~~dg~l~v~~-~~gl~~~ 114 (326)
T 2ghs_A 39 AGRVLDETPMLLGEGP-TFDPASGTAWWFNILERELHELHLASGRKTVHA-LPFMG-SALAKISDSKQLIAS-DDGLFLR 114 (326)
T ss_dssp CCEEEECSCCSBEEEE-EEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCE-EEEEEEETTEEEEEE-TTEEEEE
T ss_pred ceEEeeccCCCCCcCC-eEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-CCCcc-eEEEEeCCCeEEEEE-CCCEEEE
Confidence 4677777656678999 68875 54 556678899999987555444443 35677 899999999999987 5789999
Q ss_pred CC-CCeEEEEE
Q 032726 120 NS-QALIIVCV 129 (135)
Q Consensus 120 ~~-~G~v~vl~ 129 (135)
+. +|.++.+.
T Consensus 115 d~~~g~~~~~~ 125 (326)
T 2ghs_A 115 DTATGVLTLHA 125 (326)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCcEEEEe
Confidence 96 57777654
No 60
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.48 E-value=0.00046 Score=60.79 Aligned_cols=82 Identities=9% Similarity=0.037 Sum_probs=60.0
Q ss_pred EeccCCcCCCceeeeee-CCCcEEEE-ecCcEEEEEEcCCCceeEEeeec-CCCCCceeEC-CCCCEEEEeCCCceEE-e
Q 032726 45 KLGEGCVSHPEDVSVVV-RKGALYTA-TNDGWVKYFILHNETLVNWKHID-SQSLLGLTTT-KEGDVVICDSKKVRQH-T 119 (135)
Q Consensus 45 ~l~~g~~~GPEdi~avd-~~G~lYTg-~~dG~I~ri~~~~~~~~~~~~t~-GRPpLGl~fd-~~G~LiVaDa~~GLl~-V 119 (135)
.+..+.+..|..+ ++| .+|.+|-. ..+++|.|+..+++..+.+...+ ++| -||++| ..|+||++|...+-+. .
T Consensus 30 ~~~~~~~~~~~~l-~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P-~GlAvD~~~~~LY~tD~~~~~I~v~ 107 (628)
T 4a0p_A 30 AIPLTGVKEASAL-DFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYP-EGMAVDWLGKNLYWADTGTNRIEVS 107 (628)
T ss_dssp ECCCCSCSCEEEE-EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC-CEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEcCCCCceEEE-EEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCc-ceEEEEeCCCEEEEEECCCCEEEEE
Confidence 3455567889999 699 46888865 56899999987444456655555 678 999999 5689999999887654 4
Q ss_pred CCCCeE-EEE
Q 032726 120 NSQALI-IVC 128 (135)
Q Consensus 120 ~~~G~v-~vl 128 (135)
+.+|.. ++|
T Consensus 108 ~~dG~~~~~l 117 (628)
T 4a0p_A 108 KLDGQHRQVL 117 (628)
T ss_dssp ETTSTTCEEE
T ss_pred ecCCCcEEEE
Confidence 567643 444
No 61
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.48 E-value=0.00059 Score=55.01 Aligned_cols=80 Identities=10% Similarity=0.019 Sum_probs=56.9
Q ss_pred eEeccCCcCCCceeeeee-CCCcEEEEec-CcEEEEEEcCCCceeEEeee-cCCCCCceeECC-CCCEEEEeCCC--ceE
Q 032726 44 IKLGEGCVSHPEDVSVVV-RKGALYTATN-DGWVKYFILHNETLVNWKHI-DSQSLLGLTTTK-EGDVVICDSKK--VRQ 117 (135)
Q Consensus 44 e~l~~g~~~GPEdi~avd-~~G~lYTg~~-dG~I~ri~~~~~~~~~~~~t-~GRPpLGl~fd~-~G~LiVaDa~~--GLl 117 (135)
+.+....+..|+.+ ++| .+|+||.... .++|.+++.+....+.+... -.+| -||++|+ +|.||++|... -+.
T Consensus 108 ~~~~~~~~~~p~gl-avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P-~~iavdp~~g~ly~td~~~~~~I~ 185 (349)
T 3v64_C 108 EEVVSTGLESPGGL-AVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKP-RAIALHPMEGTIYWTDWGNTPRIE 185 (349)
T ss_dssp EEEECSSCSCCCEE-EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCE-EEEEEETTTTEEEEEECSSSCEEE
T ss_pred eEEEeCCCCCccEE-EEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCc-ceEEEecCcCeEEEeccCCCCEEE
Confidence 34444446799999 799 5789988865 58999998733333433332 3577 9999995 78899999864 477
Q ss_pred EeCCCCeE
Q 032726 118 HTNSQALI 125 (135)
Q Consensus 118 ~V~~~G~v 125 (135)
+++.+|..
T Consensus 186 r~~~dG~~ 193 (349)
T 3v64_C 186 ASSMDGSG 193 (349)
T ss_dssp EEETTSCS
T ss_pred EEeCCCCC
Confidence 78888753
No 62
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.47 E-value=0.00057 Score=59.98 Aligned_cols=78 Identities=14% Similarity=0.007 Sum_probs=58.1
Q ss_pred EeccCCcCCCceeeeeeC-CCcEEEEec--CcEEEEEEcCCCceeEEee-ecCCCCCceeECC-CCCEEEEeCCCc-eEE
Q 032726 45 KLGEGCVSHPEDVSVVVR-KGALYTATN--DGWVKYFILHNETLVNWKH-IDSQSLLGLTTTK-EGDVVICDSKKV-RQH 118 (135)
Q Consensus 45 ~l~~g~~~GPEdi~avd~-~G~lYTg~~--dG~I~ri~~~~~~~~~~~~-t~GRPpLGl~fd~-~G~LiVaDa~~G-Ll~ 118 (135)
.+..+.+..|.++ ++|+ +|.+|-... .++|.|...++...+.+.. ...+| -||++|. +++||++|++.+ +.+
T Consensus 120 ~l~~~~l~~P~~I-avdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P-~Glald~~~~~LY~aD~~~~~I~~ 197 (619)
T 3s94_A 120 VLFWQELDQPRAI-ALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWP-NGLTLDYEEQKLYWADAKLNFIHK 197 (619)
T ss_dssp EEECSSCSCCCCE-EEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSE-EEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEeCCCCCCceE-EEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCC-cEEEEEccCCEEEEEeCCCCeEEE
Confidence 4555678999999 7996 588999874 4899999874333444443 34567 9999996 689999999877 666
Q ss_pred eCCCCe
Q 032726 119 TNSQAL 124 (135)
Q Consensus 119 V~~~G~ 124 (135)
++.+|.
T Consensus 198 ~~~dG~ 203 (619)
T 3s94_A 198 SNLDGT 203 (619)
T ss_dssp ESSSCC
T ss_pred ecCCCC
Confidence 677764
No 63
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.46 E-value=0.00049 Score=56.24 Aligned_cols=79 Identities=10% Similarity=0.050 Sum_probs=56.7
Q ss_pred EeccCCcCCCceeeeee-CCCcEEEEec-CcEEEEEEcCCCceeEEeeec-CCCCCceeECC-CCCEEEEeCCC--ceEE
Q 032726 45 KLGEGCVSHPEDVSVVV-RKGALYTATN-DGWVKYFILHNETLVNWKHID-SQSLLGLTTTK-EGDVVICDSKK--VRQH 118 (135)
Q Consensus 45 ~l~~g~~~GPEdi~avd-~~G~lYTg~~-dG~I~ri~~~~~~~~~~~~t~-GRPpLGl~fd~-~G~LiVaDa~~--GLl~ 118 (135)
.+....+..|+.+ ++| .+|+||.... .++|.+++.+....+.+...+ .+| -||++|+ +|.||++|... -+.+
T Consensus 152 ~~~~~~~~~p~gl-avd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P-~giavdp~~g~ly~td~~~~~~I~r 229 (386)
T 3v65_B 152 EVVSTGLESPGGL-AVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKP-RAIALHPMEGTIYWTDWGNTPRIEA 229 (386)
T ss_dssp EEECSSCSCCCCE-EEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCE-EEEEEETTTTEEEEEECSSSCEEEE
T ss_pred EEEeCCCCCccEE-EEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCC-cEEEEEcCCCeEEEeccCCCCEEEE
Confidence 4444456799999 799 5789988765 678999876333334443333 577 9999995 67899999765 4788
Q ss_pred eCCCCeE
Q 032726 119 TNSQALI 125 (135)
Q Consensus 119 V~~~G~v 125 (135)
++.+|..
T Consensus 230 ~~~dG~~ 236 (386)
T 3v65_B 230 SSMDGSG 236 (386)
T ss_dssp EETTSCS
T ss_pred EeCCCCC
Confidence 8888753
No 64
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.37 E-value=0.0004 Score=58.10 Aligned_cols=73 Identities=16% Similarity=0.219 Sum_probs=54.4
Q ss_pred CCCceeeeee-CCCcEEEEe-cCcEEEEEEcCCCceeEEeeecC---------CCCCceeE---CCCCCEEE-EeC----
Q 032726 52 SHPEDVSVVV-RKGALYTAT-NDGWVKYFILHNETLVNWKHIDS---------QSLLGLTT---TKEGDVVI-CDS---- 112 (135)
Q Consensus 52 ~GPEdi~avd-~~G~lYTg~-~dG~I~ri~~~~~~~~~~~~t~G---------RPpLGl~f---d~~G~LiV-aDa---- 112 (135)
.=||++ ..| .+|.+|.+. ..|+|.++++.++..+.. ...+ +| .||.+ |++|+|+| +|+
T Consensus 13 ~yPE~~-~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~-sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 13 LTPEDT-IYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQM-SGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp CCCSCE-EEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEE-EEEEESSSSSCCEEEEEEEETTTT
T ss_pred cCCcCc-cCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCccee-eEEEEeccCCCCcEEEEEcccccc
Confidence 469999 687 578999998 799999998744544444 3333 56 89999 78899988 663
Q ss_pred ---------CCceEEeCCC----CeEEE
Q 032726 113 ---------KKVRQHTNSQ----ALIIV 127 (135)
Q Consensus 113 ---------~~GLl~V~~~----G~v~v 127 (135)
...|++.|.+ |+...
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~ 117 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVW 117 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSE
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEE
Confidence 5778998955 65543
No 65
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.35 E-value=0.00059 Score=57.07 Aligned_cols=67 Identities=7% Similarity=0.032 Sum_probs=49.2
Q ss_pred CCCceeeeeeCCCcEEE-EecC-cEEEEEEcCCCc-eeEEee-------ecCCCCCceeECCCCC-EEEEeCCCceEEeC
Q 032726 52 SHPEDVSVVVRKGALYT-ATND-GWVKYFILHNET-LVNWKH-------IDSQSLLGLTTTKEGD-VVICDSKKVRQHTN 120 (135)
Q Consensus 52 ~GPEdi~avd~~G~lYT-g~~d-G~I~ri~~~~~~-~~~~~~-------t~GRPpLGl~fd~~G~-LiVaDa~~GLl~V~ 120 (135)
.+|.|+ ++|.+|+.|. ++.. +.|+|+++ ++. ...|.. .+| + -||+++++|+ |+|++...=|.++|
T Consensus 137 ~~~nDv-avD~~GnaYVt~s~~~~~I~rV~p-dG~~~~~~~~~~~~~~~~~G-~-nGIv~~pdg~~Liv~~~~g~L~~fD 212 (334)
T 2p9w_A 137 FGVVQS-AQDRDGNSYVAFALGMPAIARVSA-DGKTVSTFAWESGNGGQRPG-Y-SGITFDPHSNKLIAFGGPRALTAFD 212 (334)
T ss_dssp EEEEEE-EECTTSCEEEEEEESSCEEEEECT-TSCCEEEEEECCCCSSSCCS-C-SEEEEETTTTEEEEESSSSSEEEEE
T ss_pred cCCcee-EECCCCCEEEeCCCCCCeEEEEeC-CCCEEeeeeecCCCcccccC-c-ceEEEeCCCCEEEEEcCCCeEEEEc
Confidence 469999 7999999999 7888 99999987 554 343421 122 3 5999999996 77788844477766
Q ss_pred CC
Q 032726 121 SQ 122 (135)
Q Consensus 121 ~~ 122 (135)
.+
T Consensus 213 ~~ 214 (334)
T 2p9w_A 213 VS 214 (334)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 66
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.35 E-value=0.0012 Score=50.03 Aligned_cols=72 Identities=14% Similarity=0.129 Sum_probs=54.0
Q ss_pred CCCceeeeeeCCC-cEEEEec-------CcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEEeCCC-ceEEeCC
Q 032726 52 SHPEDVSVVVRKG-ALYTATN-------DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVICDSKK-VRQHTNS 121 (135)
Q Consensus 52 ~GPEdi~avd~~G-~lYTg~~-------dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVaDa~~-GLl~V~~ 121 (135)
.+|.++ +++++| .+|++.. +|+|..++..++........+++| .+++++++|+ +||++... -+..+|.
T Consensus 41 ~~~~~~-~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 41 KGAYEM-AYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKP-FGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp SSEEEE-EEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCC-CSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cCccce-EECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCc-ceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 588999 799887 6999885 578999987555544444567888 9999999997 88988864 4556665
Q ss_pred -CCeE
Q 032726 122 -QALI 125 (135)
Q Consensus 122 -~G~v 125 (135)
+|.+
T Consensus 119 ~~~~~ 123 (353)
T 3vgz_A 119 KTGEV 123 (353)
T ss_dssp TTCCE
T ss_pred CCCee
Confidence 4554
No 67
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.34 E-value=0.00054 Score=53.79 Aligned_cols=73 Identities=11% Similarity=0.036 Sum_probs=55.1
Q ss_pred CCCceeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeeec-----CCCCCceeECCCCCEEEEeCC-------CceEEe
Q 032726 52 SHPEDVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHID-----SQSLLGLTTTKEGDVVICDSK-------KVRQHT 119 (135)
Q Consensus 52 ~GPEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~-----GRPpLGl~fd~~G~LiVaDa~-------~GLl~V 119 (135)
..|.++ +++++|++|.++.+| |++++..++..+.+.... .|+ -++++|++|++||.+.. .+|+++
T Consensus 90 ~~v~~i-~~~~dg~l~v~~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~-~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 90 FMGSAL-AKISDSKQLIASDDG-LFLRDTATGVLTLHAELESDLPGNRS-NDGRMHPSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp SCEEEE-EEEETTEEEEEETTE-EEEEETTTCCEEEEECSSTTCTTEEE-EEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CcceEE-EEeCCCeEEEEECCC-EEEEECCCCcEEEEeeCCCCCCCCCC-CCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence 357788 689999999998665 999987556555443321 255 78999999999998853 589999
Q ss_pred CCCCeEEEE
Q 032726 120 NSQALIIVC 128 (135)
Q Consensus 120 ~~~G~v~vl 128 (135)
+ +|.++.+
T Consensus 167 ~-~g~~~~~ 174 (326)
T 2ghs_A 167 A-KGKVTKL 174 (326)
T ss_dssp E-TTEEEEE
T ss_pred e-CCcEEEe
Confidence 9 8887654
No 68
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.33 E-value=0.00078 Score=54.02 Aligned_cols=77 Identities=9% Similarity=-0.040 Sum_probs=56.5
Q ss_pred ccCCcCCCceeeeee-CCCcEEEEec-CcEEEEEEcCCCceeEEe-eecCCCCCceeECC-CCCEEEEeC--CCceEEeC
Q 032726 47 GEGCVSHPEDVSVVV-RKGALYTATN-DGWVKYFILHNETLVNWK-HIDSQSLLGLTTTK-EGDVVICDS--KKVRQHTN 120 (135)
Q Consensus 47 ~~g~~~GPEdi~avd-~~G~lYTg~~-dG~I~ri~~~~~~~~~~~-~t~GRPpLGl~fd~-~G~LiVaDa--~~GLl~V~ 120 (135)
....+..|+.+ ++| .+|++|.... .++|.+++.+....+.+. ....+| -||++|+ .|.||++|. ...+.+++
T Consensus 74 ~~~~l~~p~gl-avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P-~giavdp~~g~ly~td~~~~~~I~r~~ 151 (318)
T 3sov_A 74 VVSGLLSPDGL-ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQP-RAIALDPSSGFMYWTDWGEVPKIERAG 151 (318)
T ss_dssp EEECCSCCCEE-EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSE-EEEEEEGGGTEEEEEECSSSCEEEEEE
T ss_pred EcCCCCCccEE-EEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCc-cEEEEeCCCCEEEEEecCCCCEEEEEE
Confidence 33346799999 799 5789998764 689999987333334433 344677 9999995 689999995 45688999
Q ss_pred CCCeE
Q 032726 121 SQALI 125 (135)
Q Consensus 121 ~~G~v 125 (135)
.+|..
T Consensus 152 ~dG~~ 156 (318)
T 3sov_A 152 MDGSS 156 (318)
T ss_dssp TTSCS
T ss_pred cCCCC
Confidence 88853
No 69
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.31 E-value=0.0049 Score=47.59 Aligned_cols=79 Identities=13% Similarity=0.114 Sum_probs=54.4
Q ss_pred CcCCCceeeeeeCCCc-EEEEe-cCcEEEEEEcCCCceeEEeeecC------CCCCceeECCCCC-EEEEeCC-Cc---e
Q 032726 50 CVSHPEDVSVVVRKGA-LYTAT-NDGWVKYFILHNETLVNWKHIDS------QSLLGLTTTKEGD-VVICDSK-KV---R 116 (135)
Q Consensus 50 ~~~GPEdi~avd~~G~-lYTg~-~dG~I~ri~~~~~~~~~~~~t~G------RPpLGl~fd~~G~-LiVaDa~-~G---L 116 (135)
...+|.++ ++++||+ +|.+. .+++|..|+..++..+....... .| -+++|+++|+ ||+++.. .+ +
T Consensus 209 ~~~~~~~~-~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~-~~i~~spdg~~l~v~~~~~~~~i~v 286 (361)
T 3scy_A 209 PGSGPRHL-IFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGS-GDIHLSPDGKYLYASNRLKADGVAI 286 (361)
T ss_dssp TTCCEEEE-EECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCE-EEEEECTTSSEEEEEECSSSCEEEE
T ss_pred CCCCCeEE-EEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCc-ccEEECCCCCEEEEECCCCCCEEEE
Confidence 34689999 7999995 88888 58999888765554433332222 23 6999999997 6787776 55 5
Q ss_pred EEeCC-CCeEEEEEE
Q 032726 117 QHTNS-QALIIVCVC 130 (135)
Q Consensus 117 l~V~~-~G~v~vl~~ 130 (135)
+.+++ +|..+.+..
T Consensus 287 ~~~~~~~g~~~~~~~ 301 (361)
T 3scy_A 287 FKVDETNGTLTKVGY 301 (361)
T ss_dssp EEECTTTCCEEEEEE
T ss_pred EEEcCCCCcEEEeeE
Confidence 56673 577665543
No 70
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.27 E-value=0.0014 Score=53.95 Aligned_cols=80 Identities=10% Similarity=-0.014 Sum_probs=57.5
Q ss_pred eEeccCCcCCCceeeeeeC-CCcEEEEec-CcEEEEEEcCCCceeEEee-ecCCCCCceeECC-CCCEEEEeCC--CceE
Q 032726 44 IKLGEGCVSHPEDVSVVVR-KGALYTATN-DGWVKYFILHNETLVNWKH-IDSQSLLGLTTTK-EGDVVICDSK--KVRQ 117 (135)
Q Consensus 44 e~l~~g~~~GPEdi~avd~-~G~lYTg~~-dG~I~ri~~~~~~~~~~~~-t~GRPpLGl~fd~-~G~LiVaDa~--~GLl 117 (135)
+.+....+..|+.+ ++|. +|+||.... .++|.+++.+....+.+.. ...+| -||++|+ .|.||++|.. .-+.
T Consensus 151 ~~~~~~~~~~p~gl-avD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P-~~iavdp~~g~ly~td~~~~~~I~ 228 (400)
T 3p5b_L 151 DTVISRDIQAPDGL-AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKP-RAIVVDPVHGFMYWTDWGTPAKIK 228 (400)
T ss_dssp EEEECSSCSCEEEE-EEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCE-EEEEEETTTTEEEEEECSSSCCEE
T ss_pred eEEEeCCCCCcccE-EEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCc-ceEEEecccCeEEEEeCCCCCEEE
Confidence 34444457899999 7995 789998764 6899999764333444443 33457 9999996 6889999954 4588
Q ss_pred EeCCCCeE
Q 032726 118 HTNSQALI 125 (135)
Q Consensus 118 ~V~~~G~v 125 (135)
+++.+|..
T Consensus 229 ~~~~dG~~ 236 (400)
T 3p5b_L 229 KGGLNGVD 236 (400)
T ss_dssp EEETTSCS
T ss_pred EEeCCCCc
Confidence 88888743
No 71
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.24 E-value=0.0021 Score=48.56 Aligned_cols=66 Identities=14% Similarity=0.131 Sum_probs=44.4
Q ss_pred eeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCCceEEeCCCCeE
Q 032726 56 DVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTNSQALI 125 (135)
Q Consensus 56 di~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~~~G~v 125 (135)
++ ++|.+|.+|.|+.+|.|++++.. +.........+...-.+.+|++|++||+. .||..++++|..
T Consensus 141 ~~-~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d~~g~~ 206 (330)
T 3hxj_A 141 TP-IVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAINPDGTE 206 (330)
T ss_dssp CC-EECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEECTTSCE
T ss_pred ee-EEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEECCCCcE
Confidence 45 46778899999998999998764 43221112222222567778888888887 888888877754
No 72
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.21 E-value=0.00092 Score=55.62 Aligned_cols=75 Identities=15% Similarity=0.183 Sum_probs=54.9
Q ss_pred CCcCCCceeeeeeCCCcEEEEec------------------CcEEEEEEcCCCceeEEeeecCCCCCceeECCCC-CEEE
Q 032726 49 GCVSHPEDVSVVVRKGALYTATN------------------DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEG-DVVI 109 (135)
Q Consensus 49 g~~~GPEdi~avd~~G~lYTg~~------------------dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G-~LiV 109 (135)
..+..|.|+ ++|++|++|.++. .|+|+|+++ + +.+....--..| -||+|+++| .|||
T Consensus 162 ~~~~~pND~-~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-~-~~~~~~~~l~~p-NGia~spDg~~lYv 237 (355)
T 3sre_A 162 KLLPSVNDI-VAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-N-DVRVVAEGFDFA-NGINISPDGKYVYI 237 (355)
T ss_dssp TTCSSEEEE-EEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-T-CCEEEEEEESSE-EEEEECTTSSEEEE
T ss_pred CCCCCCceE-EEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-C-eEEEeecCCccc-CcceECCCCCEEEE
Confidence 357899999 7999999988753 489999976 3 444444334678 999999998 5999
Q ss_pred EeCCCce-EE--eCCCCeEEE
Q 032726 110 CDSKKVR-QH--TNSQALIIV 127 (135)
Q Consensus 110 aDa~~GL-l~--V~~~G~v~v 127 (135)
+|...+- .+ ++++|.++.
T Consensus 238 adt~~~~I~~~~~~~~g~l~~ 258 (355)
T 3sre_A 238 AELLAHKIHVYEKHANWTLTP 258 (355)
T ss_dssp EEGGGTEEEEEEECTTSCEEE
T ss_pred EeCCCCeEEEEEECCCCcEec
Confidence 9986543 33 345676654
No 73
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.19 E-value=0.003 Score=47.70 Aligned_cols=71 Identities=15% Similarity=0.164 Sum_probs=51.8
Q ss_pred CceeeeeeCCCc-EEEEe--cCcEEEEEEcCCCceeEEee-ecCCCCCceeECCCCC-EEEEeCCCceEEeCC-CCeEE
Q 032726 54 PEDVSVVVRKGA-LYTAT--NDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTKEGD-VVICDSKKVRQHTNS-QALII 126 (135)
Q Consensus 54 PEdi~avd~~G~-lYTg~--~dG~I~ri~~~~~~~~~~~~-t~GRPpLGl~fd~~G~-LiVaDa~~GLl~V~~-~G~v~ 126 (135)
|.++ +++++|+ +|++. .+++|+.++..++....... .+..| -+++|+++|+ ||+++....+..+|. +|++.
T Consensus 143 ~~~~-~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~ 219 (353)
T 3vgz_A 143 PREL-VADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMS-TGLALDSEGKRLYTTNADGELITIDTADNKIL 219 (353)
T ss_dssp EEEE-EEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTC-CCCEEETTTTEEEEECTTSEEEEEETTTTEEE
T ss_pred CceE-EECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCcc-ceEEECCCCCEEEEEcCCCeEEEEECCCCeEE
Confidence 7889 7998875 88887 48999999875554433223 44456 9999999986 888888777888875 45543
No 74
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.18 E-value=0.0021 Score=57.53 Aligned_cols=78 Identities=18% Similarity=0.228 Sum_probs=56.5
Q ss_pred CcCCCceeeeeeC-CCcEEEEecC----------------------cEEEEEEcCCC-------ceeEEeeecCCC----
Q 032726 50 CVSHPEDVSVVVR-KGALYTATND----------------------GWVKYFILHNE-------TLVNWKHIDSQS---- 95 (135)
Q Consensus 50 ~~~GPEdi~avd~-~G~lYTg~~d----------------------G~I~ri~~~~~-------~~~~~~~t~GRP---- 95 (135)
....||++ .+++ +|.+|..+.+ |.|+||.+.++ .|+.+ -.||.|
T Consensus 382 ~mdRpEdi-~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~-l~~G~p~~~~ 459 (592)
T 4a9v_A 382 RMDRPEWI-VVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLF-VVAGNPSVHA 459 (592)
T ss_dssp CEECEEEE-EECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEE-EECCCTTTST
T ss_pred cccCccce-eEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEE-EEccCCcccc
Confidence 45679999 6984 7999998643 99999976332 24544 335543
Q ss_pred ------------------CCceeECCCCCEEE-EeCCC------------ceEEeCC-CCeEEEEE
Q 032726 96 ------------------LLGLTTTKEGDVVI-CDSKK------------VRQHTNS-QALIIVCV 129 (135)
Q Consensus 96 ------------------pLGl~fd~~G~LiV-aDa~~------------GLl~V~~-~G~v~vl~ 129 (135)
|=+|.||++|+||| -|..+ +++.+++ +|+++.++
T Consensus 460 ~~~~~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl 525 (592)
T 4a9v_A 460 GTPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM 525 (592)
T ss_dssp TSGGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEE
T ss_pred cccccCccCccccCccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEE
Confidence 13689999999999 67643 5889998 58887765
No 75
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.17 E-value=0.007 Score=46.33 Aligned_cols=78 Identities=6% Similarity=0.103 Sum_probs=49.1
Q ss_pred cCCCceeeeeeCCCc-EEEE-ecCcEEEEEEcC--CCceeEEeeec---------CCCCCceeECCCCC-EEEEeCCCc-
Q 032726 51 VSHPEDVSVVVRKGA-LYTA-TNDGWVKYFILH--NETLVNWKHID---------SQSLLGLTTTKEGD-VVICDSKKV- 115 (135)
Q Consensus 51 ~~GPEdi~avd~~G~-lYTg-~~dG~I~ri~~~--~~~~~~~~~t~---------GRPpLGl~fd~~G~-LiVaDa~~G- 115 (135)
..+|.++ ++++||+ +|.. ..+++|..++.+ ++..+...... ..| -+++|+++|+ |||++...+
T Consensus 186 g~~p~~~-~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~i~~spdG~~l~v~~~~~~~ 263 (347)
T 3hfq_A 186 GFGPRHL-VFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGA-AAIRLSHDGHFLYVSNRGYNT 263 (347)
T ss_dssp TCCEEEE-EECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEE-EEEEECTTSCEEEEEEETTTE
T ss_pred CCCCceE-EECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcc-eeEEECCCCCEEEEEeCCCCE
Confidence 4589999 7999997 8885 457776665442 24333322222 234 6799999997 778876543
Q ss_pred --eEEeCCCCeEEEEEE
Q 032726 116 --RQHTNSQALIIVCVC 130 (135)
Q Consensus 116 --Ll~V~~~G~v~vl~~ 130 (135)
++.++.+|..+.+..
T Consensus 264 v~v~~~~~~g~~~~~~~ 280 (347)
T 3hfq_A 264 LAVFAVTADGHLTLIQQ 280 (347)
T ss_dssp EEEEEECGGGCEEEEEE
T ss_pred EEEEEECCCCcEEEeEE
Confidence 444555666655543
No 76
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.13 E-value=0.0048 Score=47.79 Aligned_cols=76 Identities=5% Similarity=0.014 Sum_probs=54.6
Q ss_pred CCcCCCceeeeeeCCCcEEEEec-CcEEEEEEcCC-Cc---eeEEeeecCCCCCceeECCCCCEEEEeCC-CceEEeCCC
Q 032726 49 GCVSHPEDVSVVVRKGALYTATN-DGWVKYFILHN-ET---LVNWKHIDSQSLLGLTTTKEGDVVICDSK-KVRQHTNSQ 122 (135)
Q Consensus 49 g~~~GPEdi~avd~~G~lYTg~~-dG~I~ri~~~~-~~---~~~~~~t~GRPpLGl~fd~~G~LiVaDa~-~GLl~V~~~ 122 (135)
+.+.+|..+ ..| ++.+|.... .++|.+++.+. +. .+.+.. .++| =||++|++|+|||+|.. ..+.+++++
T Consensus 166 ~~~~~pngi-s~d-g~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P-~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 166 SVFPAANGL-KRF-GNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNI-DDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp CCSCSEEEE-EEE-TTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCC-SSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred CCCCcCCCc-CcC-CCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCC-CCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 345678887 343 347888764 68999998742 32 233333 3678 99999999999999974 458899999
Q ss_pred CeEEEE
Q 032726 123 ALIIVC 128 (135)
Q Consensus 123 G~v~vl 128 (135)
|+++++
T Consensus 242 G~~~~~ 247 (306)
T 2p4o_A 242 RSTTII 247 (306)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 987654
No 77
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.02 E-value=0.0015 Score=57.96 Aligned_cols=77 Identities=19% Similarity=0.095 Sum_probs=54.4
Q ss_pred EeccCCcCCCceeeeeeC-CCcEEEEecC--cEEEEEEcCCCceeEEeee-cCCCCCceeECC-CCCEEEEeCCCc-eEE
Q 032726 45 KLGEGCVSHPEDVSVVVR-KGALYTATND--GWVKYFILHNETLVNWKHI-DSQSLLGLTTTK-EGDVVICDSKKV-RQH 118 (135)
Q Consensus 45 ~l~~g~~~GPEdi~avd~-~G~lYTg~~d--G~I~ri~~~~~~~~~~~~t-~GRPpLGl~fd~-~G~LiVaDa~~G-Ll~ 118 (135)
.+....+..|.++ ++|+ +|.||..... ++|.|+..+....+.+... -..| -||++|. +++||++|+..+ +.+
T Consensus 489 ~l~~~~~~~P~gi-avDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~P-nGlavd~~~~~LY~aD~~~~~I~~ 566 (699)
T 1n7d_A 489 TLFREQGSKPRAI-VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP-NGITLDLLSGRLYWVDSKLHSISS 566 (699)
T ss_dssp EECCCSSCCCCCE-ECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSC-CCEEECTTTCCEEEEETTTTEEEE
T ss_pred EEEeCCCCCcceE-EEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCc-cEEEEeccCCEEEEEecCCCeEEE
Confidence 3444456789999 7996 6789987743 8999997632233333322 3567 9999996 578999998865 667
Q ss_pred eCCCC
Q 032726 119 TNSQA 123 (135)
Q Consensus 119 V~~~G 123 (135)
++.+|
T Consensus 567 ~d~dG 571 (699)
T 1n7d_A 567 IDVNG 571 (699)
T ss_dssp ECSSS
T ss_pred EccCC
Confidence 77776
No 78
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.98 E-value=0.0045 Score=48.08 Aligned_cols=69 Identities=13% Similarity=0.079 Sum_probs=52.5
Q ss_pred CCceeeeeeCCCc-EEEEecCcEEEEEEcCCCceeEEee-ecCCCCCceeECCCCCEEEEeCCCc-eEEeCCC-CeE
Q 032726 53 HPEDVSVVVRKGA-LYTATNDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTKEGDVVICDSKKV-RQHTNSQ-ALI 125 (135)
Q Consensus 53 GPEdi~avd~~G~-lYTg~~dG~I~ri~~~~~~~~~~~~-t~GRPpLGl~fd~~G~LiVaDa~~G-Ll~V~~~-G~v 125 (135)
.|..+ .++.+|+ +++...+|+|..++. +++ ..|.. ..++| .+..++.+|+++|++...+ +..+|++ |++
T Consensus 126 ~~~~v-~~~~~G~~lv~~~~~~~v~~~d~-~G~-~~w~~~~~~~~-~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 126 QFRQI-NKNKKGNYLVPLFATSEVREIAP-NGQ-LLNSVKLSGTP-FSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp SCSCC-EECTTSCEEEEETTTTEEEEECT-TSC-EEEEEECSSCC-CEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred cccCc-eECCCCCEEEEecCCCEEEEECC-CCC-EEEEEECCCCc-cceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 45567 5777886 556677999999987 444 34433 34677 9999999999999998776 8899987 876
No 79
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.93 E-value=0.0072 Score=45.57 Aligned_cols=73 Identities=11% Similarity=0.226 Sum_probs=52.1
Q ss_pred CCCce-eeeeeCCCc-EEEEecCc---EEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEEeCC-Cc---eEEeCC
Q 032726 52 SHPED-VSVVVRKGA-LYTATNDG---WVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVICDSK-KV---RQHTNS 121 (135)
Q Consensus 52 ~GPEd-i~avd~~G~-lYTg~~dG---~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVaDa~-~G---Ll~V~~ 121 (135)
.+|.. + +++++|+ +|++..+| .|..|+..++........+.+| -+++|+++|+ ||+++.. .. ++.++.
T Consensus 83 ~~~~~~~-~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~-~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 83 QSSMADV-DITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDA-VGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp SSCCCCE-EECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTE-EEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred CCCccce-EECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCc-cceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 57888 9 6999886 88555553 8999987555544444556777 9999999996 9999775 33 555666
Q ss_pred CCeEE
Q 032726 122 QALII 126 (135)
Q Consensus 122 ~G~v~ 126 (135)
+|.+.
T Consensus 161 ~g~~~ 165 (331)
T 3u4y_A 161 DGVLF 165 (331)
T ss_dssp TCCEE
T ss_pred CCcEe
Confidence 66553
No 80
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.92 E-value=0.0061 Score=47.34 Aligned_cols=71 Identities=13% Similarity=0.204 Sum_probs=50.5
Q ss_pred CCCceeeeeeCCCcEEE-EecCcEEEEEEcCCCceeEEeee----cC-C---CCCceeECCCCCEEEEe--CCC------
Q 032726 52 SHPEDVSVVVRKGALYT-ATNDGWVKYFILHNETLVNWKHI----DS-Q---SLLGLTTTKEGDVVICD--SKK------ 114 (135)
Q Consensus 52 ~GPEdi~avd~~G~lYT-g~~dG~I~ri~~~~~~~~~~~~t----~G-R---PpLGl~fd~~G~LiVaD--a~~------ 114 (135)
..|.++ .++.+|++|. +..+++|+.+++.+++ ..|... .| | | -|+....+|++||++ ...
T Consensus 165 ~~~~~~-~~~~~g~~~v~~~~~~~v~~~d~~tG~-~~w~~~~~~~~~~~l~~~-~~~~~~~~G~i~v~~~~g~~~~~~~~ 241 (276)
T 3no2_A 165 GTPFSS-AFLDNGDCLVACGDAHCFVQLNLESNR-IVRRVNANDIEGVQLFFV-AQLFPLQNGGLYICNWQGHDREAGKG 241 (276)
T ss_dssp SCCCEE-EECTTSCEEEECBTTSEEEEECTTTCC-EEEEEEGGGSBSCCCSEE-EEEEECTTSCEEEEEECTTCTTGGGS
T ss_pred CCccce-eEcCCCCEEEEeCCCCeEEEEeCcCCc-EEEEecCCCCCCcccccc-ccceEcCCCCEEEEeccCcccccccc
Confidence 368888 6888887555 5667799999874354 233221 22 3 4 688899999999999 322
Q ss_pred ---ceEEeCCCCeE
Q 032726 115 ---VRQHTNSQALI 125 (135)
Q Consensus 115 ---GLl~V~~~G~v 125 (135)
-+++++++|++
T Consensus 242 ~~~~~~~~~~~g~~ 255 (276)
T 3no2_A 242 KHPQLVEIDSEGKV 255 (276)
T ss_dssp CCCSEEEECTTSBE
T ss_pred CCceEEEECCCCCE
Confidence 39999999987
No 81
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.87 E-value=0.0079 Score=54.68 Aligned_cols=80 Identities=10% Similarity=-0.025 Sum_probs=56.5
Q ss_pred eEeccCCcCCCceeeeeeC-CCcEEEEe-cCcEEEEEEcCCCceeEEee-ecCCCCCceeECC-CCCEEEEeCCC--ceE
Q 032726 44 IKLGEGCVSHPEDVSVVVR-KGALYTAT-NDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTK-EGDVVICDSKK--VRQ 117 (135)
Q Consensus 44 e~l~~g~~~GPEdi~avd~-~G~lYTg~-~dG~I~ri~~~~~~~~~~~~-t~GRPpLGl~fd~-~G~LiVaDa~~--GLl 117 (135)
+.+....+..|+.+ ++|. +++||... ..++|.+++.++...+.+.. .-.+| -||++|+ .|+||++|... -+.
T Consensus 463 ~~vi~~~l~~P~GL-AvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P-~gIaVDp~~g~LYwtD~g~~~~I~ 540 (791)
T 3m0c_C 463 DTVISRDIQAPDGL-AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKP-RAIVVDPVHGFMYWTDWGTPAKIK 540 (791)
T ss_dssp EEEECSSCSCCCEE-EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCE-EEEEEETTTTEEEEEECSSSCEEE
T ss_pred eEEEecCCCCccee-eeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCc-ceEEEecCCCCEEEecCCCCCeEE
Confidence 34444457899999 7995 55899775 46899999874333344433 23457 9999996 58999999653 477
Q ss_pred EeCCCCeE
Q 032726 118 HTNSQALI 125 (135)
Q Consensus 118 ~V~~~G~v 125 (135)
+++.+|..
T Consensus 541 ~~~~dG~~ 548 (791)
T 3m0c_C 541 KGGLNGVD 548 (791)
T ss_dssp EEETTSCC
T ss_pred EEecCCCc
Confidence 88888753
No 82
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.86 E-value=0.006 Score=46.01 Aligned_cols=76 Identities=11% Similarity=0.123 Sum_probs=54.3
Q ss_pred cCCCceeeeeeCCCc-EEEEe-cCcEEEEEEcCCCce---eEEeeecCCCCCceeECCCCC-EEEEeCCC-ceEEeCC-C
Q 032726 51 VSHPEDVSVVVRKGA-LYTAT-NDGWVKYFILHNETL---VNWKHIDSQSLLGLTTTKEGD-VVICDSKK-VRQHTNS-Q 122 (135)
Q Consensus 51 ~~GPEdi~avd~~G~-lYTg~-~dG~I~ri~~~~~~~---~~~~~t~GRPpLGl~fd~~G~-LiVaDa~~-GLl~V~~-~ 122 (135)
..+|.++ +++++|+ +|.+. .++.|..++..++.. ......++.| -+++|+++|+ ||+++... .+..++. +
T Consensus 175 ~~~~~~~-~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~-~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 175 GTRPFNI-TFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLP-GTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp SSSEEEE-EECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCC-CCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred CCCccce-EECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCC-ceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 4689999 7999996 77776 588998888755543 2223456677 9999999998 77877643 3666775 4
Q ss_pred CeEEEE
Q 032726 123 ALIIVC 128 (135)
Q Consensus 123 G~v~vl 128 (135)
|+++.+
T Consensus 253 ~~~~~~ 258 (331)
T 3u4y_A 253 GTLSFV 258 (331)
T ss_dssp TEEEEE
T ss_pred Cceeee
Confidence 776544
No 83
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.84 E-value=0.041 Score=40.96 Aligned_cols=62 Identities=15% Similarity=0.155 Sum_probs=45.5
Q ss_pred CCCceeeeeeCCCc-EEEEecC-cEEEEEEcC--CCceeEE--eeecCCCCCceeECCCCC-EEEEeCCCc
Q 032726 52 SHPEDVSVVVRKGA-LYTATND-GWVKYFILH--NETLVNW--KHIDSQSLLGLTTTKEGD-VVICDSKKV 115 (135)
Q Consensus 52 ~GPEdi~avd~~G~-lYTg~~d-G~I~ri~~~--~~~~~~~--~~t~GRPpLGl~fd~~G~-LiVaDa~~G 115 (135)
..|..+ +++++|+ +|++..+ |.|..|+.+ ++..+.. ....++| .+++|+++|+ |++++...|
T Consensus 38 ~~~~~~-~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~ 106 (343)
T 1ri6_A 38 GQVQPM-VVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL-THISTDHQGQFVFVGSYNAG 106 (343)
T ss_dssp SCCCCE-EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC-SEEEECTTSSEEEEEETTTT
T ss_pred CCCceE-EECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCC-cEEEEcCCCCEEEEEecCCC
Confidence 578999 7999986 9999987 899887653 3443322 2335677 9999999998 677776555
No 84
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.81 E-value=0.011 Score=43.97 Aligned_cols=69 Identities=9% Similarity=-0.024 Sum_probs=50.2
Q ss_pred CCceeeeeeCCC-cEEEEe------------cCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEEeCCCceEE
Q 032726 53 HPEDVSVVVRKG-ALYTAT------------NDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVICDSKKVRQH 118 (135)
Q Consensus 53 GPEdi~avd~~G-~lYTg~------------~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVaDa~~GLl~ 118 (135)
.|.++ +++++| .+|++. .++.|..++..++........+.+| -+++|+++|+ |++++ .-+..
T Consensus 83 ~~~~~-~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~--~~i~~ 158 (337)
T 1pby_B 83 SLFGA-ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQI-TMLAWARDGSKLYGLG--RDLHV 158 (337)
T ss_dssp CTTCE-EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSC-CCEEECTTSSCEEEES--SSEEE
T ss_pred cccce-EECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCc-ceeEECCCCCEEEEeC--CeEEE
Confidence 78999 799988 688886 6899999987544443333445666 9999999997 88885 34666
Q ss_pred eCC-CCeE
Q 032726 119 TNS-QALI 125 (135)
Q Consensus 119 V~~-~G~v 125 (135)
++. +|++
T Consensus 159 ~d~~~~~~ 166 (337)
T 1pby_B 159 MDPEAGTL 166 (337)
T ss_dssp EETTTTEE
T ss_pred EECCCCcE
Confidence 664 3544
No 85
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.78 E-value=0.0013 Score=52.97 Aligned_cols=73 Identities=15% Similarity=0.099 Sum_probs=49.9
Q ss_pred ccceEeccCCcCCCceeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEe----eec--CCC-CCceeECCCCCEEEEeCC
Q 032726 41 KDLIKLGEGCVSHPEDVSVVVRKGALYTATNDGWVKYFILHNETLVNWK----HID--SQS-LLGLTTTKEGDVVICDSK 113 (135)
Q Consensus 41 ~~~e~l~~g~~~GPEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~----~t~--GRP-pLGl~fd~~G~LiVaDa~ 113 (135)
..+.+|+.+...+=..+ ++|.+|.+|.+ .||+|+|+++++.....|. .++ |-. -==|.|+++|+||.++
T Consensus 77 ~s~t~IG~~Gw~~F~a~-~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-- 152 (236)
T 1tl2_A 77 GRAKKIGNGGWNQFQFL-FFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-- 152 (236)
T ss_dssp HHCEEEECSCGGGCSEE-EECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--
T ss_pred ccccEecccccccceEE-EECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--
Confidence 44677877656666788 79999999999 8899999987654433331 111 100 0135788999999888
Q ss_pred CceE
Q 032726 114 KVRQ 117 (135)
Q Consensus 114 ~GLl 117 (135)
.|-+
T Consensus 153 dg~l 156 (236)
T 1tl2_A 153 GQQF 156 (236)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 5544
No 86
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.67 E-value=0.0022 Score=56.92 Aligned_cols=74 Identities=11% Similarity=0.003 Sum_probs=52.3
Q ss_pred CcCCCceeeeee-CCCcEEEEe-cCcEEEEEEcCCCceeEEeeec-CCCCCceeECC-CCCEEEEeCC--CceEEeCCCC
Q 032726 50 CVSHPEDVSVVV-RKGALYTAT-NDGWVKYFILHNETLVNWKHID-SQSLLGLTTTK-EGDVVICDSK--KVRQHTNSQA 123 (135)
Q Consensus 50 ~~~GPEdi~avd-~~G~lYTg~-~dG~I~ri~~~~~~~~~~~~t~-GRPpLGl~fd~-~G~LiVaDa~--~GLl~V~~~G 123 (135)
.+..|+.+ ++| .+|+||... ..++|.+++.+....+.+...+ .+| -||++|+ .|.||++|.. ..|.+++.+|
T Consensus 451 ~~~~P~gl-avD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P-~giavDp~~g~ly~td~~~~~~I~~~~~dG 528 (699)
T 1n7d_A 451 DIQAPDGL-AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKP-RAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 528 (699)
T ss_dssp CC--CCCE-ECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCC-CCEECCSSSSCCEECCCSSSCCEEBCCSSS
T ss_pred CCCCcceE-EEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCc-ceEEEccCCCcEEEcccCCCCeEEEEeCCC
Confidence 35689999 799 678999875 4689999976333334444443 567 9999996 6789999965 3577777777
Q ss_pred eE
Q 032726 124 LI 125 (135)
Q Consensus 124 ~v 125 (135)
..
T Consensus 529 ~~ 530 (699)
T 1n7d_A 529 VD 530 (699)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 87
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.66 E-value=0.02 Score=44.10 Aligned_cols=75 Identities=16% Similarity=0.199 Sum_probs=50.1
Q ss_pred CCCceeeeeeCCCc-EEEEecC--cEEEEEEc--CCCceeEE--eeecCCCCCceeECCCCC-EEEEeCCCce---EEeC
Q 032726 52 SHPEDVSVVVRKGA-LYTATND--GWVKYFIL--HNETLVNW--KHIDSQSLLGLTTTKEGD-VVICDSKKVR---QHTN 120 (135)
Q Consensus 52 ~GPEdi~avd~~G~-lYTg~~d--G~I~ri~~--~~~~~~~~--~~t~GRPpLGl~fd~~G~-LiVaDa~~GL---l~V~ 120 (135)
.+|.++ ++++||+ +|++..+ +.|.-|+. .++..+.. ..++..| -+++|+++|+ |++++..-+- +++|
T Consensus 259 ~~~~~i-~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~-~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 259 QGSGDI-HLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHP-RNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp CCEEEE-EECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCC-CEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCcccE-EECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCC-ceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 567799 7999996 8888876 66655544 23443322 2235567 9999999997 7888766554 4457
Q ss_pred C-CCeEEEE
Q 032726 121 S-QALIIVC 128 (135)
Q Consensus 121 ~-~G~v~vl 128 (135)
. +|.++.+
T Consensus 337 ~~~g~~~~~ 345 (361)
T 3scy_A 337 QATGLLTDI 345 (361)
T ss_dssp TTTCCEEEC
T ss_pred CCCCcEeec
Confidence 5 5777654
No 88
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.59 E-value=0.031 Score=41.59 Aligned_cols=76 Identities=16% Similarity=0.257 Sum_probs=50.9
Q ss_pred CCceeeeeeCCC-cEEEEe-cCcEEEEEEcC--CCceeEE--eeecCCCCCceeECCCCC-EEEEeCCCce---EEeCC-
Q 032726 53 HPEDVSVVVRKG-ALYTAT-NDGWVKYFILH--NETLVNW--KHIDSQSLLGLTTTKEGD-VVICDSKKVR---QHTNS- 121 (135)
Q Consensus 53 GPEdi~avd~~G-~lYTg~-~dG~I~ri~~~--~~~~~~~--~~t~GRPpLGl~fd~~G~-LiVaDa~~GL---l~V~~- 121 (135)
.|.++ +++++| .+|.+. .||.|..|+.. ++..+.. ...++.| .+++|+++|+ |++++...|- ++++.
T Consensus 232 ~~~~i-~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~ 309 (343)
T 1ri6_A 232 WAADI-HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQP-RGFNVDHSGKYLIAAGQKSHHISVYEIVGE 309 (343)
T ss_dssp CEEEE-EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSC-CCEEECTTSSEEEEECTTTCEEEEEEEETT
T ss_pred Cccce-EECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCcc-ceEEECCCCCEEEEecCCCCeEEEEEEcCC
Confidence 45579 699988 588555 78999888764 2223322 3455667 9999999997 7777755453 44475
Q ss_pred CCeEEEEEE
Q 032726 122 QALIIVCVC 130 (135)
Q Consensus 122 ~G~v~vl~~ 130 (135)
.|..+.+.-
T Consensus 310 ~g~~~~~~~ 318 (343)
T 1ri6_A 310 QGLLHEKGR 318 (343)
T ss_dssp TTEEEEEEE
T ss_pred CceeeEccc
Confidence 477766643
No 89
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.59 E-value=0.025 Score=42.00 Aligned_cols=71 Identities=11% Similarity=0.135 Sum_probs=48.3
Q ss_pred CCceeeeeeCCC-cEEEE-ecCcEEEEEEcCCCceeEEeeecC------CCCCceeECCCC-CEEEEe------------
Q 032726 53 HPEDVSVVVRKG-ALYTA-TNDGWVKYFILHNETLVNWKHIDS------QSLLGLTTTKEG-DVVICD------------ 111 (135)
Q Consensus 53 GPEdi~avd~~G-~lYTg-~~dG~I~ri~~~~~~~~~~~~t~G------RPpLGl~fd~~G-~LiVaD------------ 111 (135)
.|.++ +++++| .+|.+ ..+++|..++..++........++ +| .+++|+++| .|++++
T Consensus 35 ~~~~~-~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 112 (337)
T 1pby_B 35 TPMVP-MVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSL-FGAALSPDGKTLAIYESPVRLELTHFEV 112 (337)
T ss_dssp CCCCE-EECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECT-TCEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred Cccce-EEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccc-cceEECCCCCEEEEEecccccccccccc
Confidence 39999 799998 46655 557899999875554332222232 77 999999999 578885
Q ss_pred CCCceEEeCCC-CeE
Q 032726 112 SKKVRQHTNSQ-ALI 125 (135)
Q Consensus 112 a~~GLl~V~~~-G~v 125 (135)
....+..++.+ +.+
T Consensus 113 ~~~~i~v~d~~~~~~ 127 (337)
T 1pby_B 113 QPTRVALYDAETLSR 127 (337)
T ss_dssp CCCEEEEEETTTTEE
T ss_pred cCceEEEEECCCCcE
Confidence 33567777753 443
No 90
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.32 E-value=0.021 Score=42.83 Aligned_cols=69 Identities=9% Similarity=0.148 Sum_probs=48.8
Q ss_pred CCceeeeeeCCC-cEEEEecC------------cEEEEEEcCCCce----eEEeeecCCCCCceeECCCCCEEEEeCCCc
Q 032726 53 HPEDVSVVVRKG-ALYTATND------------GWVKYFILHNETL----VNWKHIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 53 GPEdi~avd~~G-~lYTg~~d------------G~I~ri~~~~~~~----~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
.|.++ +++++| .+|++..+ +.|..++..++.. ..+ ....++ .+++|+++|++|+++..
T Consensus 93 ~~~~~-~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~-~~~~~s~dg~l~~~~~~-- 167 (349)
T 1jmx_B 93 SMYSF-AISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-PMPRQV-YLMRAADDGSLYVAGPD-- 167 (349)
T ss_dssp CSSCE-EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-ECCSSC-CCEEECTTSCEEEESSS--
T ss_pred cccce-EECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec-cCCCcc-cceeECCCCcEEEccCc--
Confidence 38999 699888 58998876 9999998644321 122 223355 88999999998887654
Q ss_pred eEEeCC-CCeEE
Q 032726 116 RQHTNS-QALII 126 (135)
Q Consensus 116 Ll~V~~-~G~v~ 126 (135)
+..+|. +|++.
T Consensus 168 i~~~d~~~~~~~ 179 (349)
T 1jmx_B 168 IYKMDVKTGKYT 179 (349)
T ss_dssp EEEECTTTCCEE
T ss_pred EEEEeCCCCcee
Confidence 888885 46543
No 91
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=96.18 E-value=0.04 Score=43.13 Aligned_cols=54 Identities=11% Similarity=0.043 Sum_probs=38.9
Q ss_pred CcCCCceeeeeeCCCc-EEEEecCcEEEEEEcC-CCceeEE-ee-ecCCCCCceeECCCCC
Q 032726 50 CVSHPEDVSVVVRKGA-LYTATNDGWVKYFILH-NETLVNW-KH-IDSQSLLGLTTTKEGD 106 (135)
Q Consensus 50 ~~~GPEdi~avd~~G~-lYTg~~dG~I~ri~~~-~~~~~~~-~~-t~GRPpLGl~fd~~G~ 106 (135)
....|..+ +++++|+ +|++..+ .|..|+.. ++..... .. ..|.| .+++|+++|+
T Consensus 38 ~~~~~~~~-a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~-~~~~~spdg~ 95 (365)
T 1jof_A 38 QDEPISWM-TFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHP-RANDADTNTR 95 (365)
T ss_dssp TTCCCSEE-EECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSG-GGGCTTSCCE
T ss_pred CCCCCcEE-EECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCC-ccEEECCCCC
Confidence 34579999 7999996 9999988 77777653 4443322 22 34777 8999999998
No 92
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.08 E-value=0.039 Score=47.98 Aligned_cols=69 Identities=12% Similarity=0.030 Sum_probs=52.4
Q ss_pred cCCCceeeee-------eCCCc-EEEEecCc-------EEEEEEcCC-Cce------eEEeeecCCCCCceeECC-CCCE
Q 032726 51 VSHPEDVSVV-------VRKGA-LYTATNDG-------WVKYFILHN-ETL------VNWKHIDSQSLLGLTTTK-EGDV 107 (135)
Q Consensus 51 ~~GPEdi~av-------d~~G~-lYTg~~dG-------~I~ri~~~~-~~~------~~~~~t~GRPpLGl~fd~-~G~L 107 (135)
...|-++ ++ |.+|. +|.....+ .|..+.... +.+ ..++ ...+| .|+++|+ +|+|
T Consensus 185 ~~~p~~i-a~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p-~giavdp~~g~L 261 (496)
T 3kya_A 185 TNRIRSI-AFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA-AYKQC-NGATIHPINGEL 261 (496)
T ss_dssp CSBEEEE-EECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-EESCC-CCEEECTTTCCE
T ss_pred cCCCcEE-EEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec-cCCCc-eEEEEcCCCCeE
Confidence 4569999 79 98887 99998876 377775422 233 2333 45678 9999998 7899
Q ss_pred EEEeCCCc-eEEeCCC
Q 032726 108 VICDSKKV-RQHTNSQ 122 (135)
Q Consensus 108 iVaDa~~G-Ll~V~~~ 122 (135)
||||...| +++++++
T Consensus 262 Yvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 262 YFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EEEETTTTEEEEECHH
T ss_pred EEEECCCCEEEEEecc
Confidence 99999999 8899964
No 93
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.03 E-value=0.0086 Score=52.10 Aligned_cols=73 Identities=12% Similarity=0.115 Sum_probs=53.9
Q ss_pred cccceEeccCCcCCCceeeeeeC--CCcEEEEecC-cEEEEEEcCCCceeEEeeecC----CCCCceeE-------CCCC
Q 032726 40 MKDLIKLGEGCVSHPEDVSVVVR--KGALYTATND-GWVKYFILHNETLVNWKHIDS----QSLLGLTT-------TKEG 105 (135)
Q Consensus 40 L~~~e~l~~g~~~GPEdi~avd~--~G~lYTg~~d-G~I~ri~~~~~~~~~~~~t~G----RPpLGl~f-------d~~G 105 (135)
+.+++.+-...+..|..+ ++|+ +++||....+ ++|.+|+..++....+...+. || -+|+| |++|
T Consensus 127 ~~~~~~~~~~~~~~p~~l-a~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p-~~ia~~~~~~~~d~~G 204 (496)
T 3kya_A 127 FDGPEGVKCCGFSDNGRL-AFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRI-RSIAFNKKIEGYADEA 204 (496)
T ss_dssp SSSSTTTSCBCCCSEEEE-EEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBE-EEEEECCCBTTTBCTT
T ss_pred ccccccccccccCCCCEE-EEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCC-cEEEEeecccccCCCC
Confidence 333333335557789999 7995 5899999875 789899875556666554432 68 99999 9999
Q ss_pred C-EEEEeCCC
Q 032726 106 D-VVICDSKK 114 (135)
Q Consensus 106 ~-LiVaDa~~ 114 (135)
+ |||+|...
T Consensus 205 ~~lyvad~~~ 214 (496)
T 3kya_A 205 EYMIVAIDYD 214 (496)
T ss_dssp CEEEEEECCC
T ss_pred CEEEEEeCCC
Confidence 8 99999875
No 94
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.93 E-value=0.04 Score=48.04 Aligned_cols=70 Identities=10% Similarity=0.019 Sum_probs=52.5
Q ss_pred ceeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeeec------CCCCCceeECCCCCEEEEeCCCceEEeCCC-CeEEE
Q 032726 55 EDVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHID------SQSLLGLTTTKEGDVVICDSKKVRQHTNSQ-ALIIV 127 (135)
Q Consensus 55 Edi~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~------GRPpLGl~fd~~G~LiVaDa~~GLl~V~~~-G~v~v 127 (135)
-++ +.|++|++|.|+. +-|.++++.++..+.+.... .+. ..|..|++|+|+|+-...||.+++++ +.++.
T Consensus 453 ~~i-~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i-~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~ 529 (781)
T 3v9f_A 453 RVF-YEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFV-RSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRK 529 (781)
T ss_dssp EEE-EECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCE-EEEEECTTCCEEEEESSSCEEEECTTCCEEEE
T ss_pred EEE-EECCCCCEEEEEC-CceEEEeCCCCeEEecccCccccccccee-EEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEE
Confidence 356 5788999999999 55999987555555443322 344 67889999999999988999999986 45443
No 95
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.77 E-value=0.056 Score=42.18 Aligned_cols=59 Identities=22% Similarity=0.334 Sum_probs=42.9
Q ss_pred CCCceeeeeeCCCc-EEEEec---------------CcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCE-EEEeC
Q 032726 52 SHPEDVSVVVRKGA-LYTATN---------------DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDV-VICDS 112 (135)
Q Consensus 52 ~GPEdi~avd~~G~-lYTg~~---------------dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~L-iVaDa 112 (135)
.+|.++ +++++|+ +|++.. ||.|..|+..++........++.| -+++|+++|+. ++++.
T Consensus 345 ~~~~~~-~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 345 DKPNTI-ALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQP-TGLDVSPDNRYLVISDF 420 (433)
T ss_dssp SSEEEE-EECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSE-EEEEECTTSCEEEEEET
T ss_pred CCCCeE-EEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCC-ceEEEcCCCCEEEEEEC
Confidence 568899 6998885 898887 689999987555443323345666 99999999975 45554
No 96
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=95.66 E-value=0.072 Score=45.06 Aligned_cols=77 Identities=10% Similarity=0.017 Sum_probs=53.4
Q ss_pred eEeccCCcCCCceeeeeeCCC-cEEEEe----------cCcEEEEEEcCCCceeEEeeec--------CCCCCceeECCC
Q 032726 44 IKLGEGCVSHPEDVSVVVRKG-ALYTAT----------NDGWVKYFILHNETLVNWKHID--------SQSLLGLTTTKE 104 (135)
Q Consensus 44 e~l~~g~~~GPEdi~avd~~G-~lYTg~----------~dG~I~ri~~~~~~~~~~~~t~--------GRPpLGl~fd~~ 104 (135)
..|..| ..| .+ ++++|| .+|.+. .++.|..|+..+.+......++ .+| -|++|+++
T Consensus 113 ~~I~vG--~~P-gi-a~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P-~~~~~spD 187 (426)
T 3c75_H 113 GMTDGG--FLP-HP-VAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQ-WMNALTPD 187 (426)
T ss_dssp EEEEEC--SSC-EE-EECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCG-GGSEECTT
T ss_pred EEEECC--CCC-ce-EECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCc-ceEEEcCC
Confidence 445666 468 99 799988 599997 4778999977544433222333 467 99999999
Q ss_pred CC-EEEEeCC--CceEEeCC-CCeE
Q 032726 105 GD-VVICDSK--KVRQHTNS-QALI 125 (135)
Q Consensus 105 G~-LiVaDa~--~GLl~V~~-~G~v 125 (135)
|+ |||+... .-+..+|. ++++
T Consensus 188 Gk~lyV~n~~~~~~VsVID~~t~kv 212 (426)
T 3c75_H 188 NKNLLFYQFSPAPAVGVVDLEGKTF 212 (426)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEE
T ss_pred CCEEEEEecCCCCeEEEEECCCCeE
Confidence 84 8998753 44778885 4444
No 97
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.61 E-value=0.063 Score=46.91 Aligned_cols=68 Identities=15% Similarity=0.227 Sum_probs=51.6
Q ss_pred eeeeeeCCCc-EEEEecCcEEEEEEcCCCceeEEee-----ecCCCCCceeECCCCCEEEEeCCCceEEeCCC-CeEE
Q 032726 56 DVSVVVRKGA-LYTATNDGWVKYFILHNETLVNWKH-----IDSQSLLGLTTTKEGDVVICDSKKVRQHTNSQ-ALII 126 (135)
Q Consensus 56 di~avd~~G~-lYTg~~dG~I~ri~~~~~~~~~~~~-----t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~~~-G~v~ 126 (135)
++ +.|.+|+ +|.|+.++-|.+++..++..+.+.. ...+. ..+..|++|+|+|+-. .||.+.+++ +..+
T Consensus 410 ~i-~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v-~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 410 AV-YVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENV-YAILPDGEGNLWLGTL-SALVRFNPEQRSFT 484 (795)
T ss_dssp EE-EEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCE-EEEEECSSSCEEEEES-SCEEEEETTTTEEE
T ss_pred EE-EEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCee-EEEEECCCCCEEEEec-CceeEEeCCCCeEE
Confidence 56 5788999 9999998889999875555555432 12334 6788899999999987 899999975 5554
No 98
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=95.60 E-value=0.13 Score=40.94 Aligned_cols=74 Identities=12% Similarity=0.019 Sum_probs=49.8
Q ss_pred CCCceeeeeeCC-CcEEEEec-----------CcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEEeCCCceEE
Q 032726 52 SHPEDVSVVVRK-GALYTATN-----------DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVICDSKKVRQH 118 (135)
Q Consensus 52 ~GPEdi~avd~~-G~lYTg~~-----------dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVaDa~~GLl~ 118 (135)
.|++.+ +++++ +++|...+ ++.|..|+....+...--.+++ | -+++|+++|+ ||++.. .-+-.
T Consensus 254 ~g~~~~-a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p-~~ia~spdg~~l~v~n~-~~v~v 329 (361)
T 2oiz_A 254 GGYNLV-GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-A-LSMTIDQQRNLMLTLDG-GNVNV 329 (361)
T ss_dssp CCSSCE-EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-C-CEEEEETTTTEEEEECS-SCEEE
T ss_pred CCeeEE-EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-e-eEEEECCCCCEEEEeCC-CeEEE
Confidence 567778 68977 57998875 3489999875444433335566 7 9999999986 666664 55666
Q ss_pred eCC-CCeEEEEE
Q 032726 119 TNS-QALIIVCV 129 (135)
Q Consensus 119 V~~-~G~v~vl~ 129 (135)
+|. +|.++++.
T Consensus 330 ~D~~t~~l~~~~ 341 (361)
T 2oiz_A 330 YDISQPEPKLLR 341 (361)
T ss_dssp EECSSSSCEEEE
T ss_pred EECCCCcceeeE
Confidence 674 46334443
No 99
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.57 E-value=0.044 Score=47.55 Aligned_cols=66 Identities=18% Similarity=0.086 Sum_probs=48.3
Q ss_pred CCCceeeeeeCCC-cEEEEecCcEEEEEEcC--CCceeEEeeecCCCCCceeEC----CCCC-EEEEeCCCceEEe
Q 032726 52 SHPEDVSVVVRKG-ALYTATNDGWVKYFILH--NETLVNWKHIDSQSLLGLTTT----KEGD-VVICDSKKVRQHT 119 (135)
Q Consensus 52 ~GPEdi~avd~~G-~lYTg~~dG~I~ri~~~--~~~~~~~~~t~GRPpLGl~fd----~~G~-LiVaDa~~GLl~V 119 (135)
..|+.+ ++++|| .+|++..||+|..|+.. +.....-..+|..| -+++|+ ++|+ +||++-.-+-+.|
T Consensus 197 ~~p~~v-~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P-~~ia~s~~~~pDGk~l~v~n~~~~~v~V 270 (567)
T 1qks_A 197 YAVHIS-RLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEA-RSIETSKMEGWEDKYAIAGAYWPPQYVI 270 (567)
T ss_dssp SCEEEE-EECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEE-EEEEECCSTTCTTTEEEEEEEETTEEEE
T ss_pred CCccce-EECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCC-ceeEEccccCCCCCEEEEEEccCCeEEE
Confidence 478999 799998 58999999999999873 33333334567788 999999 4885 7777655444433
No 100
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.56 E-value=0.062 Score=40.16 Aligned_cols=69 Identities=12% Similarity=0.056 Sum_probs=48.8
Q ss_pred CCCceeeeeeC-CC-cEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEEeCCCceEEeCC-CCe
Q 032726 52 SHPEDVSVVVR-KG-ALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVICDSKKVRQHTNS-QAL 124 (135)
Q Consensus 52 ~GPEdi~avd~-~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVaDa~~GLl~V~~-~G~ 124 (135)
..|+++ ++++ +| .+|++ +++|..|+..+++.......++.| -+++|+++|+ |+++....-+..+|. +++
T Consensus 255 ~~~~~~-~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 255 ELYFTG-LRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTY-YCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp SCEEEE-EECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCC-CEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred Ccceee-EecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCc-cceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 368888 6888 88 57777 999999987555543333456777 9999999985 777655544666665 344
No 101
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.50 E-value=0.067 Score=41.12 Aligned_cols=72 Identities=13% Similarity=0.207 Sum_probs=50.2
Q ss_pred CCCceeeeeeCCCc-E-EEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEEeCC-CceEEeCCC-CeE
Q 032726 52 SHPEDVSVVVRKGA-L-YTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVICDSK-KVRQHTNSQ-ALI 125 (135)
Q Consensus 52 ~GPEdi~avd~~G~-l-YTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVaDa~-~GLl~V~~~-G~v 125 (135)
.+|.++ +++++|+ + +++..||.|..|+..++........++++ .+++|+++|+ |+++... .-+..+|.+ |..
T Consensus 32 ~~~~~~-~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v-~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~ 108 (391)
T 1l0q_A 32 SNPMGA-VISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSP-QGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV 108 (391)
T ss_dssp SSEEEE-EECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSE-EEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCcceE-EECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCc-cceEECCCCCEEEEEECCCCEEEEEECCCCeE
Confidence 457899 6999985 5 46679999999987555544333445566 9999999987 6677765 445555643 443
No 102
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=95.34 E-value=0.033 Score=49.82 Aligned_cols=64 Identities=9% Similarity=0.132 Sum_probs=48.6
Q ss_pred CcCCCceeeeeeCCCcEEEEecCc-------------EEEEEEcCCCceeEEee--ecCCCCCceeECCCCC-EEEEeCC
Q 032726 50 CVSHPEDVSVVVRKGALYTATNDG-------------WVKYFILHNETLVNWKH--IDSQSLLGLTTTKEGD-VVICDSK 113 (135)
Q Consensus 50 ~~~GPEdi~avd~~G~lYTg~~dG-------------~I~ri~~~~~~~~~~~~--t~GRPpLGl~fd~~G~-LiVaDa~ 113 (135)
.+.+|.++ +||++|+||.++..+ .++++.+..+....+.. .+.+| -|+.|.+|++ |||+--.
T Consensus 474 ~fnsPDnL-~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEp-nGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 474 MFNSPDGL-GFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEV-TGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CCCCEEEE-EECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEE-EEEEECTTSSEEEEEEES
T ss_pred ccCCCCce-EECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccc-cCCEECCCCCEEEEEEeC
Confidence 47899999 799999999966432 89999876666666653 34567 9999999985 8887544
Q ss_pred Cc
Q 032726 114 KV 115 (135)
Q Consensus 114 ~G 115 (135)
-|
T Consensus 552 PG 553 (592)
T 4a9v_A 552 PG 553 (592)
T ss_dssp TT
T ss_pred CC
Confidence 33
No 103
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.34 E-value=0.087 Score=42.73 Aligned_cols=72 Identities=8% Similarity=0.020 Sum_probs=48.9
Q ss_pred CCceeeeeeCCC-cEEEEec----------CcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC--EEEEeC-CCceEE
Q 032726 53 HPEDVSVVVRKG-ALYTATN----------DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD--VVICDS-KKVRQH 118 (135)
Q Consensus 53 GPEdi~avd~~G-~lYTg~~----------dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~--LiVaDa-~~GLl~ 118 (135)
|+..+ +++++| ++|...+ ++.|..|+....+....-.++++| -|++|+++|+ +|++.. ..-+..
T Consensus 268 g~~~~-~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p-~~i~~s~Dg~~~l~v~~~~~~~V~V 345 (373)
T 2mad_H 268 GWQQV-AYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDV-DAISVAQDGGPDLYALSAGTEVLHI 345 (373)
T ss_pred ceEeE-EECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCc-CeEEECCCCCeEEEEEcCCCCeEEE
Confidence 34447 688775 7999875 358999987544443333778888 9999999997 677764 344555
Q ss_pred eCC-CCeEE
Q 032726 119 TNS-QALII 126 (135)
Q Consensus 119 V~~-~G~v~ 126 (135)
+|. ++++.
T Consensus 346 iD~~t~~vv 354 (373)
T 2mad_H 346 YDAGAGDQD 354 (373)
T ss_pred EECCCCCEE
Confidence 564 35544
No 104
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=95.33 E-value=0.14 Score=45.47 Aligned_cols=78 Identities=17% Similarity=0.193 Sum_probs=52.6
Q ss_pred CcCCCceeeeee-CCCcEEEEec----------------------CcEEEEEEcCCC-------ceeEEeeecCCC----
Q 032726 50 CVSHPEDVSVVV-RKGALYTATN----------------------DGWVKYFILHNE-------TLVNWKHIDSQS---- 95 (135)
Q Consensus 50 ~~~GPEdi~avd-~~G~lYTg~~----------------------dG~I~ri~~~~~-------~~~~~~~t~GRP---- 95 (135)
....||++ .++ .+|.+|..+. .|.|+|+.+..+ .|+.+ -+||.|
T Consensus 382 ~f~RpEgi-~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~-v~~g~p~~~~ 459 (592)
T 3zwu_A 382 RMDRPEWI-VVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLF-VVAGNPSVHA 459 (592)
T ss_dssp CEECEEEE-EECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEE-EECCCTTTST
T ss_pred EEecccee-EEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEE-EeccCccccc
Confidence 56899999 688 5899998865 489999976322 13333 344433
Q ss_pred ------------------CCceeECCCCCEEEEeCCC-------------ceEEeCC-CCeEEEEE
Q 032726 96 ------------------LLGLTTTKEGDVVICDSKK-------------VRQHTNS-QALIIVCV 129 (135)
Q Consensus 96 ------------------pLGl~fd~~G~LiVaDa~~-------------GLl~V~~-~G~v~vl~ 129 (135)
|=+|.||+.|+||||.-.- .++..++ .|++...+
T Consensus 460 ~~~~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~ 525 (592)
T 3zwu_A 460 GTPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM 525 (592)
T ss_dssp TSGGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEE
T ss_pred ccccccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEE
Confidence 1468999999999985431 2566676 47776544
No 105
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.26 E-value=0.12 Score=42.61 Aligned_cols=73 Identities=7% Similarity=-0.107 Sum_probs=50.8
Q ss_pred eEeccCCcCCCceeeeeeCCC-cEEEEe----------cCcEEEEEEcCCCceeEEeeec--------CCCCCceeECCC
Q 032726 44 IKLGEGCVSHPEDVSVVVRKG-ALYTAT----------NDGWVKYFILHNETLVNWKHID--------SQSLLGLTTTKE 104 (135)
Q Consensus 44 e~l~~g~~~GPEdi~avd~~G-~lYTg~----------~dG~I~ri~~~~~~~~~~~~t~--------GRPpLGl~fd~~ 104 (135)
..+..| ..| .+ ++++|| .+|.+. .+++|..|+.........-.++ .+| .+++|+++
T Consensus 60 ~~i~vG--~~P-~i-~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P-~~ia~SpD 134 (368)
T 1mda_H 60 GHSLGA--FLS-LA-VAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRV-HIIGNCAS 134 (368)
T ss_dssp EEEEEC--TTC-EE-EECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCT-TSEEECTT
T ss_pred EEEeCC--CCC-ce-EECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCc-ceEEEcCC
Confidence 446666 468 89 799887 799997 4789999987544443322343 468 99999999
Q ss_pred C-CEEEEeCC-Cc-eEE--eCC
Q 032726 105 G-DVVICDSK-KV-RQH--TNS 121 (135)
Q Consensus 105 G-~LiVaDa~-~G-Ll~--V~~ 121 (135)
| .||||... .. +.. +|.
T Consensus 135 Gk~lyVan~~~~~~v~V~~iD~ 156 (368)
T 1mda_H 135 SACLLFFLFGSSAAAGLSVPGA 156 (368)
T ss_dssp SSCEEEEECSSSCEEEEEETTT
T ss_pred CCEEEEEccCCCCeEEEEEEch
Confidence 8 59999754 33 444 465
No 106
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.24 E-value=0.11 Score=41.20 Aligned_cols=70 Identities=11% Similarity=0.144 Sum_probs=46.6
Q ss_pred CcCCCceeeeee-CCCcEEEEecC-cEEEEEEcCCCceeE-EeeecC---------CCCCceeECCCCCEEEEeCCCceE
Q 032726 50 CVSHPEDVSVVV-RKGALYTATND-GWVKYFILHNETLVN-WKHIDS---------QSLLGLTTTKEGDVVICDSKKVRQ 117 (135)
Q Consensus 50 ~~~GPEdi~avd-~~G~lYTg~~d-G~I~ri~~~~~~~~~-~~~t~G---------RPpLGl~fd~~G~LiVaDa~~GLl 117 (135)
.+..++++ ++| ..|.+|.-++. .+++.++. ++.... +.-..| +| =||+||++|+|||.--.-=++
T Consensus 171 ~~~d~S~l-~~dp~tg~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qp-EGia~d~~G~lyIvsE~n~~y 247 (255)
T 3qqz_A 171 TLDDVSGA-EFNQQKNTLLVLSHESRALQEVTL-VGEVIGEMSLTKGSRGLSHNIKQA-EGVAMDASGNIYIVSEPNRFY 247 (255)
T ss_dssp CSSCCCEE-EEETTTTEEEEEETTTTEEEEECT-TCCEEEEEECSTTGGGCSSCCCSE-EEEEECTTCCEEEEETTTEEE
T ss_pred ccCCceeE-EEcCCCCeEEEEECCCCeEEEEcC-CCCEEEEEEcCCccCCcccccCCC-CeeEECCCCCEEEEcCCceEE
Confidence 35689999 698 56888877664 55666654 555433 333333 67 899999999999875444456
Q ss_pred EeCCC
Q 032726 118 HTNSQ 122 (135)
Q Consensus 118 ~V~~~ 122 (135)
+..++
T Consensus 248 ~f~~~ 252 (255)
T 3qqz_A 248 RFTPQ 252 (255)
T ss_dssp EEEC-
T ss_pred EEEec
Confidence 66554
No 107
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.20 E-value=0.081 Score=41.27 Aligned_cols=68 Identities=13% Similarity=0.273 Sum_probs=47.3
Q ss_pred CCCceeeeeeCCC-cEEEEe--------cCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEEeCCCce-EEeC
Q 032726 52 SHPEDVSVVVRKG-ALYTAT--------NDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVICDSKKVR-QHTN 120 (135)
Q Consensus 52 ~GPEdi~avd~~G-~lYTg~--------~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVaDa~~GL-l~V~ 120 (135)
.+|.++ +++++| .+|++. .||.|..|+..++.........+.| .+++|+++|+ ++++....|- ...+
T Consensus 254 ~~~~~~-~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~g~~l~~~~~~~~~v~v~d 331 (433)
T 3bws_A 254 GLPRGL-LLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNK-RHIVSGNTENKIYVSDMCCSKIEVYD 331 (433)
T ss_dssp SEEEEE-EECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECE-EEEEECSSTTEEEEEETTTTEEEEEE
T ss_pred CCceEE-EEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCc-ceEEECCCCCEEEEEecCCCEEEEEE
Confidence 458889 698888 688888 5899999987555443333334567 8999999985 7777655553 3344
Q ss_pred C
Q 032726 121 S 121 (135)
Q Consensus 121 ~ 121 (135)
.
T Consensus 332 ~ 332 (433)
T 3bws_A 332 L 332 (433)
T ss_dssp T
T ss_pred C
Confidence 3
No 108
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=95.19 E-value=0.11 Score=40.59 Aligned_cols=72 Identities=7% Similarity=-0.075 Sum_probs=48.4
Q ss_pred CCCceeeeeeCCCc-EEEEec-CcEEEEEEcC-CCceeEEee----e-cCCCCCceeECCCCC-EEEEeCCCc---eEEe
Q 032726 52 SHPEDVSVVVRKGA-LYTATN-DGWVKYFILH-NETLVNWKH----I-DSQSLLGLTTTKEGD-VVICDSKKV---RQHT 119 (135)
Q Consensus 52 ~GPEdi~avd~~G~-lYTg~~-dG~I~ri~~~-~~~~~~~~~----t-~GRPpLGl~fd~~G~-LiVaDa~~G---Ll~V 119 (135)
..|.++ ++++||+ +|++.. +++|..++.. ++..+.... . +..| -+++|+++|+ ||+++...+ ++.+
T Consensus 145 ~~~~~~-~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p-~~~~~spdg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 145 TGIHGM-VFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHP-RWVAMHPTGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp CCEEEE-EECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCE-EEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CcceEE-EECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCC-CEeEECCCCCEEEEEECCCCeEEEEEE
Confidence 578899 7999995 888764 6788888764 454332221 2 4556 9999999995 677776554 3344
Q ss_pred CC-CCeE
Q 032726 120 NS-QALI 125 (135)
Q Consensus 120 ~~-~G~v 125 (135)
+. +|.+
T Consensus 223 ~~~~g~~ 229 (365)
T 1jof_A 223 DPATHMP 229 (365)
T ss_dssp CTTTCCE
T ss_pred eCCCCcE
Confidence 54 4654
No 109
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.12 E-value=0.13 Score=45.02 Aligned_cols=69 Identities=9% Similarity=0.152 Sum_probs=51.2
Q ss_pred eeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeeecCCC---CCceeECCCCCEEEEeCCCceEEeCCC-CeEEE
Q 032726 56 DVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHIDSQS---LLGLTTTKEGDVVICDSKKVRQHTNSQ-ALIIV 127 (135)
Q Consensus 56 di~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRP---pLGl~fd~~G~LiVaDa~~GLl~V~~~-G~v~v 127 (135)
++ +.|.+|++|.|+.+ -|.|+++.++..+.+....|-| ..++..|++|+|+++- .+||.+++++ +.++.
T Consensus 547 ~i-~~d~~g~lWigT~~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t-~~Gl~~~~~~~~~~~~ 619 (795)
T 4a2l_A 547 CI-YEASNGIIWVGTRE-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST-NRGISCFNPETEKFRN 619 (795)
T ss_dssp EE-EECTTSCEEEEESS-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE-TTEEEEEETTTTEEEE
T ss_pred EE-EECCCCCEEEEeCC-CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc-CCceEEEcCCCCcEEE
Confidence 56 57899999999997 5889987555555554444543 1458889999999987 5899999985 55543
No 110
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.09 E-value=0.15 Score=37.33 Aligned_cols=66 Identities=12% Similarity=0.150 Sum_probs=46.6
Q ss_pred CCceeeeeeCCCcEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCceEEeC
Q 032726 53 HPEDVSVVVRKGALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTN 120 (135)
Q Consensus 53 GPEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~ 120 (135)
...++ ++.++|.+++|..||.|.-|+..++.. ..+..-.+.. ..++|+++|+++++....-+...+
T Consensus 227 ~i~~~-~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 227 FVYCI-KLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISI-WSVDCMSNGDIIVGSSDNLVRIFS 293 (313)
T ss_dssp CEEEE-EECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCE-EEEEECTTSCEEEEETTSCEEEEE
T ss_pred eEEEE-EEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceE-EEEEEccCCCEEEEeCCCcEEEEe
Confidence 34567 688899999999999999887655443 3333333444 789999999988776655555444
No 111
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.06 E-value=0.069 Score=46.55 Aligned_cols=70 Identities=9% Similarity=0.121 Sum_probs=51.2
Q ss_pred ceeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeeecC----CCCCceeECCCCCEEEEeCCCce-EEeCCC-CeEEE
Q 032726 55 EDVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHIDS----QSLLGLTTTKEGDVVICDSKKVR-QHTNSQ-ALIIV 127 (135)
Q Consensus 55 Edi~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~G----RPpLGl~fd~~G~LiVaDa~~GL-l~V~~~-G~v~v 127 (135)
-++ +.|++|++|.|+.++-+.|+++..+..+.+....| .. ..+..|++|+|+|+.. .|| .+.+++ +.++.
T Consensus 498 ~~i-~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~ 573 (781)
T 3v9f_A 498 RSI-AQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-EGLVCFPSARNFDYQV 573 (781)
T ss_dssp EEE-EECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET-TEEEEESCTTTCCCEE
T ss_pred EEE-EEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC-CCceEEECCCCCcEEE
Confidence 467 68999999999996669999764445555433222 33 5678899999999988 899 998874 55443
No 112
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=95.06 E-value=0.15 Score=42.79 Aligned_cols=77 Identities=13% Similarity=0.077 Sum_probs=51.1
Q ss_pred eEeccCCcCCCceeeeeeCCC-cEEEEe----------cCcEEEEEEcCCCceeEEeeecC--------CCCCceeECCC
Q 032726 44 IKLGEGCVSHPEDVSVVVRKG-ALYTAT----------NDGWVKYFILHNETLVNWKHIDS--------QSLLGLTTTKE 104 (135)
Q Consensus 44 e~l~~g~~~GPEdi~avd~~G-~lYTg~----------~dG~I~ri~~~~~~~~~~~~t~G--------RPpLGl~fd~~ 104 (135)
..|..| .+|. + ++++|| .+|.+. .++.|..|+........--.+++ +| -+++|+++
T Consensus 73 ~~I~vG--~~P~-v-a~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P-~~~a~spD 147 (386)
T 3sjl_D 73 GMIDGG--FLPN-P-VVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYP-WMTSLTPD 147 (386)
T ss_dssp EEEEEC--SSCE-E-EECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCG-GGEEECTT
T ss_pred EEEECC--CCCc-E-EECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCC-ceEEEcCC
Confidence 335555 5786 9 799998 599987 36778888764444322223332 67 99999999
Q ss_pred CC-EEEEeCC--CceEEeCC-CCeE
Q 032726 105 GD-VVICDSK--KVRQHTNS-QALI 125 (135)
Q Consensus 105 G~-LiVaDa~--~GLl~V~~-~G~v 125 (135)
|+ |||+... ..+-.+|. ++++
T Consensus 148 Gk~lyVan~~~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 148 GKTLLFYQFSPAPAVGVVDLEGKAF 172 (386)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEE
T ss_pred CCEEEEEEcCCCCeEEEEECCCCcE
Confidence 96 8998753 44667774 4543
No 113
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=94.84 E-value=0.049 Score=43.40 Aligned_cols=57 Identities=12% Similarity=0.149 Sum_probs=41.2
Q ss_pred eEeccCCcCCCceeeeeeCCC-cEEEEecCcEEEEEEcCCC--ceeE-EeeecCCCCCceeECCCCC
Q 032726 44 IKLGEGCVSHPEDVSVVVRKG-ALYTATNDGWVKYFILHNE--TLVN-WKHIDSQSLLGLTTTKEGD 106 (135)
Q Consensus 44 e~l~~g~~~GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~--~~~~-~~~t~GRPpLGl~fd~~G~ 106 (135)
..+..+. |.++ ++++|| .+|++.. +.|.-|+..++ +... +..+|..| .++.++++|+
T Consensus 300 ~~i~~~~---p~~i-a~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P-~~~~~~p~G~ 360 (361)
T 2oiz_A 300 ARIPGRD---ALSM-TIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEAS-LQVQFHPVGG 360 (361)
T ss_dssp EEEECTT---CCEE-EEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSE-EEEEECCCSC
T ss_pred EEEecCC---eeEE-EECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCc-EEEEecCCCC
Confidence 4455553 9999 799988 5888876 99999987555 3322 23456666 9999999985
No 114
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.79 E-value=0.18 Score=40.19 Aligned_cols=79 Identities=15% Similarity=0.141 Sum_probs=54.3
Q ss_pred cccceEeccCCcCCCceeeeeeCCCcEEEEec---CcEEEEEEcCCCceeEEeeecCCCCC--ceeECCCCCEEEEeCCC
Q 032726 40 MKDLIKLGEGCVSHPEDVSVVVRKGALYTATN---DGWVKYFILHNETLVNWKHIDSQSLL--GLTTTKEGDVVICDSKK 114 (135)
Q Consensus 40 L~~~e~l~~g~~~GPEdi~avd~~G~lYTg~~---dG~I~ri~~~~~~~~~~~~t~GRPpL--Gl~fd~~G~LiVaDa~~ 114 (135)
.+-.+.+..+.-..|+.+ +++++|.+|.++. ++.|.+++...+....-..++.+| - |++++. ++||+++-..
T Consensus 9 ~~vv~~~p~~~~~f~~Gl-~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~-fgeGi~~~g-~~lyv~t~~~ 85 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGL-VYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY-FGEGLTLLN-EKLYQVVWLK 85 (266)
T ss_dssp EEEEEEEECCTTCCEEEE-EECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC-CEEEEEEET-TEEEEEETTC
T ss_pred ceEEEEEECCCCCCcccE-EEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc-ceEEEEEeC-CEEEEEEecC
Confidence 344566677655568899 6998899999874 589999998666655444566665 5 455653 4799998665
Q ss_pred ce-EEeCC
Q 032726 115 VR-QHTNS 121 (135)
Q Consensus 115 GL-l~V~~ 121 (135)
+. +.+|.
T Consensus 86 ~~v~viD~ 93 (266)
T 2iwa_A 86 NIGFIYDR 93 (266)
T ss_dssp SEEEEEET
T ss_pred CEEEEEEC
Confidence 54 44554
No 115
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.76 E-value=0.16 Score=38.91 Aligned_cols=68 Identities=16% Similarity=0.254 Sum_probs=47.5
Q ss_pred CCCceeeeeeCCCc-E-EEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEEeCCCc-eEEeCC
Q 032726 52 SHPEDVSVVVRKGA-L-YTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVICDSKKV-RQHTNS 121 (135)
Q Consensus 52 ~GPEdi~avd~~G~-l-YTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVaDa~~G-Ll~V~~ 121 (135)
.+|.++ +++++|+ + +++..||.|..++..++........+..| -++.|+++|+ |+++...-| +..+|.
T Consensus 116 ~~~~~~-~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~~~dg~~l~~~~~~~~~v~~~d~ 187 (391)
T 1l0q_A 116 KSPLGL-ALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSP-KGIAVTPDGTKVYVANFDSMSISVIDT 187 (391)
T ss_dssp SSEEEE-EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSE-EEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CCcceE-EECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCc-ceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 478899 6998885 6 58888999999987555443333445556 8999999986 556766555 444453
No 116
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.34 E-value=0.35 Score=35.56 Aligned_cols=62 Identities=16% Similarity=0.190 Sum_probs=42.7
Q ss_pred CCCceeeeeeCCC-cEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCCc
Q 032726 52 SHPEDVSVVVRKG-ALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 52 ~GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
....++ .++++| .++++..||.|.-++..++.........+.. ..++|+++|+.+++-...|
T Consensus 184 ~~i~~~-~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~~~~~ 246 (337)
T 1gxr_A 184 DGASCI-DISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI-FSLGYCPTGEWLAVGMESS 246 (337)
T ss_dssp SCEEEE-EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCE-EEEEECTTSSEEEEEETTS
T ss_pred CceEEE-EECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCce-EEEEECCCCCEEEEEcCCC
Confidence 345677 577777 6999999999999987555433222334555 8999999988666544444
No 117
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=94.30 E-value=0.27 Score=37.39 Aligned_cols=61 Identities=13% Similarity=0.058 Sum_probs=42.6
Q ss_pred CCceeeeeeCCCcEEEEecCcEEEEEEcCCCcee-EEeeecCCCCCceeECCCCCEEEEeCCCc
Q 032726 53 HPEDVSVVVRKGALYTATNDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 53 GPEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~~-~~~~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
...++ .+.++|.++++..||.|.-|+..++... .+..-.+.. ..++|+++|+++++-...|
T Consensus 291 ~i~~~-~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i-~~~~~s~~~~~l~~~~~dg 352 (425)
T 1r5m_A 291 SIVSA-SWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPI-FAGRISQDGQKYAVAFMDG 352 (425)
T ss_dssp CEEEE-EEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTCCE-EEEEECTTSSEEEEEETTS
T ss_pred cEEEE-EECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCccE-EEEEEcCCCCEEEEEECCC
Confidence 44567 5788889999999999999987544432 222223444 8899999998777655444
No 118
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=94.27 E-value=0.51 Score=38.13 Aligned_cols=76 Identities=12% Similarity=0.049 Sum_probs=49.6
Q ss_pred EeccCCcCCCceeeeeeCCC-cEEEEec----------CcEEEEEEcCCCceeEEeeec--------CCCCCceeECCCC
Q 032726 45 KLGEGCVSHPEDVSVVVRKG-ALYTATN----------DGWVKYFILHNETLVNWKHID--------SQSLLGLTTTKEG 105 (135)
Q Consensus 45 ~l~~g~~~GPEdi~avd~~G-~lYTg~~----------dG~I~ri~~~~~~~~~~~~t~--------GRPpLGl~fd~~G 105 (135)
.+..| .+| .+ ++++|| .+|.... ++.|..|+....+......++ ..| -+++++++|
T Consensus 62 ~i~~g--~~p-~i-~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p-~~~~~spDG 136 (373)
T 2mad_H 62 HVNGG--FLP-NP-VAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYS-WMNANTPNN 136 (373)
T ss_pred EecCC--CCC-Ce-EECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCc-cceEECCCC
Confidence 35554 589 99 799988 6999873 677888876433332222343 235 899999998
Q ss_pred C-EEEEeCC--CceEEeCCCCeE
Q 032726 106 D-VVICDSK--KVRQHTNSQALI 125 (135)
Q Consensus 106 ~-LiVaDa~--~GLl~V~~~G~v 125 (135)
+ |||+... .-+..+|.+|++
T Consensus 137 ~~l~v~n~~~~~~v~viD~t~~~ 159 (373)
T 2mad_H 137 ADLLFFQFAAGPAVGLVVQGGSS 159 (373)
T ss_pred CEEEEEecCCCCeEEEEECCCCE
Confidence 5 8888643 347777722443
No 119
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.26 E-value=0.16 Score=43.17 Aligned_cols=57 Identities=16% Similarity=0.116 Sum_probs=43.0
Q ss_pred CCceeeeeeCCC-cEEEEecCcEEEEEEc--CCCceeEEeeecCCCCCceeECC----CCC-EEEEe
Q 032726 53 HPEDVSVVVRKG-ALYTATNDGWVKYFIL--HNETLVNWKHIDSQSLLGLTTTK----EGD-VVICD 111 (135)
Q Consensus 53 GPEdi~avd~~G-~lYTg~~dG~I~ri~~--~~~~~~~~~~t~GRPpLGl~fd~----~G~-LiVaD 111 (135)
.|..+ ++++|| .+|++..||.|..|+. .++....-...+..| -+++|++ +|+ ||++.
T Consensus 180 ~~~~v-~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p-~~va~sp~~~~dg~~l~v~~ 244 (543)
T 1nir_A 180 AVHIS-RMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEA-RSVESSKFKGYEDRYTIAGA 244 (543)
T ss_dssp TEEEE-EECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEE-EEEEECCSTTCTTTEEEEEE
T ss_pred ccceE-EECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCc-ceEEeCCCcCCCCCEEEEEE
Confidence 37788 699888 6999999999999987 344332223456667 9999999 886 66665
No 120
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=93.79 E-value=0.36 Score=35.47 Aligned_cols=57 Identities=9% Similarity=0.033 Sum_probs=39.6
Q ss_pred CCCceeeeeeCCC-cEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEE
Q 032726 52 SHPEDVSVVVRKG-ALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVIC 110 (135)
Q Consensus 52 ~GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVa 110 (135)
....++ .+.++| .++++..||.|.-|+..++.........+.. ..+.|+++|+.+++
T Consensus 266 ~~v~~~-~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~ 323 (337)
T 1gxr_A 266 SCVLSL-KFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSV-LSCDISVDDKYIVT 323 (337)
T ss_dssp SCEEEE-EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCE-EEEEECTTSCEEEE
T ss_pred cceeEE-EECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCCcE-EEEEECCCCCEEEE
Confidence 345677 588777 5999999999998877544433222234444 89999999987654
No 121
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=93.72 E-value=0.17 Score=42.76 Aligned_cols=71 Identities=6% Similarity=0.081 Sum_probs=49.0
Q ss_pred CCceeeeeeCCC-cEEEEec----------CcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC--EEEEeC-CCceEE
Q 032726 53 HPEDVSVVVRKG-ALYTATN----------DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD--VVICDS-KKVRQH 118 (135)
Q Consensus 53 GPEdi~avd~~G-~lYTg~~----------dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~--LiVaDa-~~GLl~ 118 (135)
|...+ +++++| ++|...+ ++.|.-|+....+....-.++++| .||.|+++|+ ||++.. ..-+..
T Consensus 320 g~~~v-a~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P-~gia~spDg~~~lyv~n~~s~~VsV 397 (426)
T 3c75_H 320 GWQQT-AYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEI-DSINVSQDAEPLLYALSAGTQTLHI 397 (426)
T ss_dssp SSSCE-EEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEE-CEEEECCSSSCEEEEEETTTTEEEE
T ss_pred Cceee-EEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCc-CeEEEccCCCEEEEEEcCCCCeEEE
Confidence 34458 688775 7999875 357999987555544334678888 9999999997 777775 344555
Q ss_pred eCC-CCeE
Q 032726 119 TNS-QALI 125 (135)
Q Consensus 119 V~~-~G~v 125 (135)
+|. ++++
T Consensus 398 ID~~t~kv 405 (426)
T 3c75_H 398 YDAATGEE 405 (426)
T ss_dssp EETTTCCE
T ss_pred EECCCCCE
Confidence 564 4544
No 122
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=93.72 E-value=0.77 Score=36.48 Aligned_cols=73 Identities=10% Similarity=0.004 Sum_probs=49.5
Q ss_pred eccCCcCCCceeeeeeCCCcEEEEec-CcEEEEEEcCCCceeEEeeec-CCCCCceeECCCCCEEEEeCCCceEEeCCC
Q 032726 46 LGEGCVSHPEDVSVVVRKGALYTATN-DGWVKYFILHNETLVNWKHID-SQSLLGLTTTKEGDVVICDSKKVRQHTNSQ 122 (135)
Q Consensus 46 l~~g~~~GPEdi~avd~~G~lYTg~~-dG~I~ri~~~~~~~~~~~~t~-GRPpLGl~fd~~G~LiVaDa~~GLl~V~~~ 122 (135)
+..+...-+|.+ +++ ++.+|..+. +++|..|+..+.+...--..+ +.+ .|+..|. +.||++|..-=|..+|++
T Consensus 60 i~l~~~~fgeGi-~~~-g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g-~glt~Dg-~~l~vs~gs~~l~viD~~ 134 (266)
T 2iwa_A 60 HKMDDSYFGEGL-TLL-NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDG-WGLATDG-KILYGSDGTSILYEIDPH 134 (266)
T ss_dssp EECCTTCCEEEE-EEE-TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSC-CEEEECS-SSEEEECSSSEEEEECTT
T ss_pred EecCCCcceEEE-EEe-CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCe-EEEEECC-CEEEEECCCCeEEEEECC
Confidence 444555677888 576 458998875 789999987544432222345 666 6777653 479999976668888875
No 123
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.47 E-value=0.33 Score=37.71 Aligned_cols=63 Identities=19% Similarity=0.313 Sum_probs=41.0
Q ss_pred CCCcEEEEecCcEEEEEEcCCCceeEEe-eecCCCCCceeECCCCCEEEEeCCCceEEeCC-CCeEE
Q 032726 62 RKGALYTATNDGWVKYFILHNETLVNWK-HIDSQSLLGLTTTKEGDVVICDSKKVRQHTNS-QALII 126 (135)
Q Consensus 62 ~~G~lYTg~~dG~I~ri~~~~~~~~~~~-~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~~-~G~v~ 126 (135)
.+|.+|.++.||.|+.++..+++. .|. ...+.. ..--...+|.+||.....+|..+|. +|++.
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~-~W~~~~~~~~-~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~ 166 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTV-AWQTKVAGEA-LSRPVVSDGLVLIHTSNGQLQALNEADGAVK 166 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCE-EEEEECSSCC-CSCCEEETTEEEEECTTSEEEEEETTTCCEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE-EEEEeCCCce-EcCCEEECCEEEEEcCCCeEEEEECCCCcEE
Confidence 578999999999999998755543 333 233322 2222223567777776667888885 57643
No 124
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=93.42 E-value=0.63 Score=36.56 Aligned_cols=63 Identities=13% Similarity=0.035 Sum_probs=43.0
Q ss_pred eeeeeeCCCcE-EE--EecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCCceEEeC
Q 032726 56 DVSVVVRKGAL-YT--ATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTN 120 (135)
Q Consensus 56 di~avd~~G~l-YT--g~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~ 120 (135)
.+ +|.+||+. .+ |..||.|.-|+..++.....-...+.. ..++|.++|++++.-...++..++
T Consensus 138 ~v-~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V-~~v~fspdg~~l~s~s~~~~~~~~ 203 (365)
T 4h5i_A 138 LV-YISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEV-KDLHFSTDGKVVAYITGSSLEVIS 203 (365)
T ss_dssp EE-EECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCC-CEEEECTTSSEEEEECSSCEEEEE
T ss_pred EE-EEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCce-EEEEEccCCceEEeccceeEEEEE
Confidence 46 68899963 44 447898887876544432222345665 999999999988766666666665
No 125
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=93.38 E-value=0.49 Score=35.12 Aligned_cols=57 Identities=12% Similarity=-0.066 Sum_probs=40.4
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCC
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSK 113 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~ 113 (135)
-++ ++.++| .++++..||.|.-|+..++.........+.. ..++|+++|+.+++-..
T Consensus 78 ~~~-~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~ 135 (369)
T 3zwl_B 78 WSI-DVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPV-KRVEFSPCGNYFLAILD 135 (369)
T ss_dssp EEE-EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCE-EEEEECTTSSEEEEEEC
T ss_pred EEE-EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCe-EEEEEccCCCEEEEecC
Confidence 466 577777 6999999999999987555433222344555 89999999987665444
No 126
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=93.24 E-value=0.72 Score=35.90 Aligned_cols=63 Identities=8% Similarity=0.019 Sum_probs=44.0
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCceEEe
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHT 119 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V 119 (135)
-++ .+.++| .+.||..||.|.-|+...+.. ..+..-+... ..++|.++|+.+++-..-|-.++
T Consensus 68 ~~~-~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v-~~~~~sp~g~~lasg~~d~~i~v 132 (354)
T 2pbi_B 68 LCM-DWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWV-MACAYAPSGCAIACGGLDNKCSV 132 (354)
T ss_dssp EEE-EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCC-CEEEECTTSSEEEEESTTSEEEE
T ss_pred EEE-EECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCE-EEEEECCCCCEEEEeeCCCCEEE
Confidence 466 577777 699999999999887644433 2233344555 89999999998887665554433
No 127
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=93.07 E-value=0.53 Score=36.15 Aligned_cols=63 Identities=13% Similarity=0.010 Sum_probs=42.5
Q ss_pred CceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCceEE
Q 032726 54 PEDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQH 118 (135)
Q Consensus 54 PEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~ 118 (135)
=.++ .+.++| .+.||..||.|.-|+..++.. ..+..-.+.. ..++|+++|+++++-..-|..+
T Consensus 58 v~~~-~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~s~~~d~~v~ 122 (340)
T 1got_B 58 IYAM-HWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWV-MTCAYAPSGNYVACGGLDNICS 122 (340)
T ss_dssp EEEE-EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCE-EEEEECTTSSEEEEEETTCEEE
T ss_pred eEEE-EECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccE-EEEEECCCCCEEEEEeCCCeEE
Confidence 3467 577777 599999999999887644432 2233223334 7889999998877655555444
No 128
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=93.03 E-value=0.47 Score=35.41 Aligned_cols=65 Identities=9% Similarity=0.074 Sum_probs=42.3
Q ss_pred CCceeeeeeCCC-cEEEEecCcEEEEEEcCCCcee-EEeeecCCCCCceeECCCCCEEEEeCCCceEEe
Q 032726 53 HPEDVSVVVRKG-ALYTATNDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHT 119 (135)
Q Consensus 53 GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~-~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V 119 (135)
.-.++ .+.++| .+++|..||.|.-|+..++... .+..-.+.. ..++|+++|+++++-..-|-+++
T Consensus 25 ~v~~~-~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 25 AVSSV-KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI-SDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp CEEEE-EECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE-EEEEECTTSSEEEEEETTSEEEE
T ss_pred cEEEE-EECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCce-EEEEEcCCCCEEEEECCCCEEEE
Confidence 34577 688887 5899999999988876444432 222222333 68889999987765554454433
No 129
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=93.02 E-value=1.5 Score=34.49 Aligned_cols=74 Identities=8% Similarity=0.109 Sum_probs=50.5
Q ss_pred CCCceeeeeeCC-CcEEE-EecCcEEEEEEcCCCceeEEeeec--CCCCCceeECCCCCEEEEeCCC-ceEE--eCCCCe
Q 032726 52 SHPEDVSVVVRK-GALYT-ATNDGWVKYFILHNETLVNWKHID--SQSLLGLTTTKEGDVVICDSKK-VRQH--TNSQAL 124 (135)
Q Consensus 52 ~GPEdi~avd~~-G~lYT-g~~dG~I~ri~~~~~~~~~~~~t~--GRPpLGl~fd~~G~LiVaDa~~-GLl~--V~~~G~ 124 (135)
.-+..+ +.|++ +.+|+ ...+++|++++.. +....-.... +.+ =||+++++|.++|+|... .|+. ++.++.
T Consensus 27 ~~lSGl-a~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~-EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 27 NNISSL-TWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDL-ETIEYIGDNQFVISDERDYAIYVISLTPNSE 103 (255)
T ss_dssp SCEEEE-EEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSE-EEEEECSTTEEEEEETTTTEEEEEEECTTCC
T ss_pred cCccee-EEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCCh-HHeEEeCCCEEEEEECCCCcEEEEEcCCCCe
Confidence 457789 68864 67998 7889999999874 5433222223 566 799999999988887444 4444 356676
Q ss_pred EEEE
Q 032726 125 IIVC 128 (135)
Q Consensus 125 v~vl 128 (135)
+.++
T Consensus 104 i~~~ 107 (255)
T 3qqz_A 104 VKIL 107 (255)
T ss_dssp EEEE
T ss_pred eeee
Confidence 4443
No 130
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=92.98 E-value=0.52 Score=34.32 Aligned_cols=64 Identities=16% Similarity=0.158 Sum_probs=42.7
Q ss_pred CCceeeeeeCCCcEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCceEE
Q 032726 53 HPEDVSVVVRKGALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQH 118 (135)
Q Consensus 53 GPEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~ 118 (135)
.-.++ ++..+..+++|..||.|.-|+..++.. ..+..-.+.. ..++|+++|+++++-...|.++
T Consensus 20 ~v~~~-~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~ 84 (313)
T 3odt_A 20 DVRDV-VAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFL-NSVCYDSEKELLLFGGKDTMIN 84 (313)
T ss_dssp CEEEE-EEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCE-EEEEEETTTTEEEEEETTSCEE
T ss_pred CcEEE-EecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccE-EEEEECCCCCEEEEecCCCeEE
Confidence 33466 463445899999999998887744443 2233334444 8999999998777666666544
No 131
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.95 E-value=0.16 Score=43.27 Aligned_cols=50 Identities=18% Similarity=0.156 Sum_probs=34.7
Q ss_pred CCcEEEEecCcEEEEEEcCCCc--e--eEE---------eeecCCCCCceeECCCCCEEEEeCC
Q 032726 63 KGALYTATNDGWVKYFILHNET--L--VNW---------KHIDSQSLLGLTTTKEGDVVICDSK 113 (135)
Q Consensus 63 ~G~lYTg~~dG~I~ri~~~~~~--~--~~~---------~~t~GRPpLGl~fd~~G~LiVaDa~ 113 (135)
.|.++.+...|+|+|+..+.+. + +.+ ....||| .+++++++|+|||+|-.
T Consensus 293 ~g~~f~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~-~~v~~~pdG~Lyv~~~~ 355 (463)
T 2wg3_C 293 YGSYVFGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHI-LGFGEDELGEVYILSSS 355 (463)
T ss_dssp TTCEEEEETTSCEEEEEC-----CCEEEEECEEETTSSCSCCCSEE-EEEEECTTCCEEEEEES
T ss_pred cceEEEecCCCcEEEEEeCCCCceeeEEEeecCCcccccccccCcc-eEEEECCCCCEEEEecc
Confidence 3567778788999999653321 2 222 1235899 99999999999999964
No 132
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=92.94 E-value=1.1 Score=35.47 Aligned_cols=72 Identities=13% Similarity=0.033 Sum_probs=51.2
Q ss_pred ccCCcCCCceeeeeeCCCcEEEEe-cCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCCceEEeCCC
Q 032726 47 GEGCVSHPEDVSVVVRKGALYTAT-NDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTNSQ 122 (135)
Q Consensus 47 ~~g~~~GPEdi~avd~~G~lYTg~-~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~~~ 122 (135)
..+.-.-.|.+ +++ ++++|..+ ++++++.++..+.+...--..+|.+ .||..|. +.||+.|...-|..+|++
T Consensus 60 ~l~~~~fgeGi-~~~-~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G-wglt~dg-~~L~vSdgs~~l~~iDp~ 132 (243)
T 3mbr_X 60 EVPPPYFGAGI-VAW-RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG-WALTSDD-SHLYMSDGTAVIRKLDPD 132 (243)
T ss_dssp ECCTTCCEEEE-EEE-TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCC-CEEEECS-SCEEEECSSSEEEEECTT
T ss_pred eCCCCcceeEE-EEe-CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc-eEEeeCC-CEEEEECCCCeEEEEeCC
Confidence 33333445888 465 46899886 5889999987544432223446777 8998874 589999998889999975
No 133
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=92.90 E-value=0.95 Score=33.54 Aligned_cols=61 Identities=10% Similarity=0.052 Sum_probs=41.7
Q ss_pred CCceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCc
Q 032726 53 HPEDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 53 GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
.-.++ ++.++| .+++|..||.|.-|+..++.. ..+..-.+.. ..++|+++|++++.-..-|
T Consensus 34 ~v~~~-~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~~~dg 96 (369)
T 3zwl_B 34 PLTQV-KYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTI-WSIDVDCFTKYCVTGSADY 96 (369)
T ss_dssp CEEEE-EECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCE-EEEEECTTSSEEEEEETTT
T ss_pred eEEEE-EEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcE-EEEEEcCCCCEEEEEeCCC
Confidence 34567 588887 599999999999887644443 3333334444 7899999988766544445
No 134
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.86 E-value=0.11 Score=44.29 Aligned_cols=67 Identities=15% Similarity=0.294 Sum_probs=47.4
Q ss_pred ceEeccCCcCCCceeeeeeCCCc--EEEEecCcEEEEEEcCCCce--eE-------Eeee-----cCCCCCceeECCC--
Q 032726 43 LIKLGEGCVSHPEDVSVVVRKGA--LYTATNDGWVKYFILHNETL--VN-------WKHI-----DSQSLLGLTTTKE-- 104 (135)
Q Consensus 43 ~e~l~~g~~~GPEdi~avd~~G~--lYTg~~dG~I~ri~~~~~~~--~~-------~~~t-----~GRPpLGl~fd~~-- 104 (135)
++.+..+ +.-|=++ +++++|. +|.+.+.|+|++++. ++.. +. ++.- .+-+ |||+|+++
T Consensus 6 v~~va~g-L~~P~~~-a~~pdG~~rl~V~er~G~i~~~~~-~g~~~~~~~~~~~~~~~~g~~~~~e~Gl-lgia~~P~f~ 81 (463)
T 2wg3_C 6 IQEVVSG-LRQPVGA-LHSGDGSQRLFILEKEGYVKILTP-EGEIFKEPYLDIHKLVQSGIKGGDERGL-LSLAFHPNYK 81 (463)
T ss_dssp EEEEEEE-ESSEEEE-ECCSSSSCCEEEEETTTEEEEECT-TSCBCSSCSEECTTTBCCCCSSSCCCSE-EEEEECTTHH
T ss_pred EEEeccC-CCCceEE-EECCCCCeEEEEEeCCceEEEEeC-CCCeeeeeecCCcceeccCccccCCCcc-eeeEeCCCCc
Confidence 4556665 7899999 6998884 999999999999965 3321 11 1110 2345 99999975
Q ss_pred --CCEEEEeCC
Q 032726 105 --GDVVICDSK 113 (135)
Q Consensus 105 --G~LiVaDa~ 113 (135)
|.|||+-+.
T Consensus 82 ~n~~lYv~yt~ 92 (463)
T 2wg3_C 82 KNGKLYVSYTT 92 (463)
T ss_dssp HHCEEEEEEEE
T ss_pred CCCEEEEEEeC
Confidence 899998653
No 135
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.80 E-value=0.2 Score=43.45 Aligned_cols=63 Identities=10% Similarity=0.093 Sum_probs=45.2
Q ss_pred eeeeeeCCCcEEE--EecCcEEEEEEcCCCceeEEeee----cCCCCCceeECCCCCEEEEeCCCceEEeCCC
Q 032726 56 DVSVVVRKGALYT--ATNDGWVKYFILHNETLVNWKHI----DSQSLLGLTTTKEGDVVICDSKKVRQHTNSQ 122 (135)
Q Consensus 56 di~avd~~G~lYT--g~~dG~I~ri~~~~~~~~~~~~t----~GRPpLGl~fd~~G~LiVaDa~~GLl~V~~~ 122 (135)
++ ..|++|++|. |+.+| |.|+++.++..+.+... ...+ ..+..|++|+|+++-. .||.+.+++
T Consensus 476 ~i-~~d~~g~lWi~~~t~~G-l~~~d~~~~~~~~~~~~~~~~~~~~-~~i~~d~~g~lWigt~-~Gl~~~~~~ 544 (758)
T 3ott_A 476 QI-IPDNEGNVWVLLYNNKG-IDKINPRTREVTKLFADELTGEKSP-NYLLCDEDGLLWVGFH-GGVMRINPK 544 (758)
T ss_dssp EE-EECTTSCEEEEETTCSS-EEEEETTTTEEEEECTTTSCGGGCE-EEEEECTTSCEEEEET-TEEEEECC-
T ss_pred eE-EEcCCCCEEEEccCCCC-cEEEeCCCCceEEecCCCcCCCccc-ceEEECCCCCEEEEec-CceEEEecC
Confidence 57 5789999998 66655 88998755554544211 1234 5688899999999974 799999974
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=92.76 E-value=0.62 Score=33.21 Aligned_cols=67 Identities=10% Similarity=-0.032 Sum_probs=44.2
Q ss_pred CCceeeeeeCCCcEEEEecCcEEEEEEcCC-CceeEEeee--cCCCCCceeECCCCCEEEEeC-----CCceEEeCC
Q 032726 53 HPEDVSVVVRKGALYTATNDGWVKYFILHN-ETLVNWKHI--DSQSLLGLTTTKEGDVVICDS-----KKVRQHTNS 121 (135)
Q Consensus 53 GPEdi~avd~~G~lYTg~~dG~I~ri~~~~-~~~~~~~~t--~GRPpLGl~fd~~G~LiVaDa-----~~GLl~V~~ 121 (135)
...++ .+.++|+.+....+|.|+.++..+ +....+... .++. ..++|+++|+.+++-. ..-|+.++.
T Consensus 43 ~v~~~-~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~spdg~~l~~~~~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 43 LFEAP-NWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICN-NDHGISPDGALYAISDKVEFGKSAIYLLPS 117 (297)
T ss_dssp CCEEE-EECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBC-SCCEECTTSSEEEEEECTTTSSCEEEEEET
T ss_pred ceEee-EECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccc-cceEECCCCCEEEEEEeCCCCcceEEEEEC
Confidence 46688 688999755555699999998755 444333222 2444 7899999998655444 355676664
No 137
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=92.71 E-value=0.72 Score=36.07 Aligned_cols=59 Identities=12% Similarity=0.053 Sum_probs=41.2
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCc
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
.++ .+.++| .+.||..||.|.-|+..++.. ..+..-+..- ..++|+++|+++++-..-|
T Consensus 70 ~~~-~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v-~~~~~s~~g~~las~~~d~ 130 (380)
T 3iz6_a 70 YSL-DWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWV-MECAFAPNGQSVACGGLDS 130 (380)
T ss_dssp EEE-EECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTC-CCCEECTTSSEEEECCSSS
T ss_pred EEE-EEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCE-EEEEECCCCCEEEEeeCCC
Confidence 366 577777 699999999999997644433 2333334444 8899999999887654444
No 138
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=92.67 E-value=0.44 Score=38.54 Aligned_cols=57 Identities=21% Similarity=0.279 Sum_probs=38.7
Q ss_pred eeeeeeCCC-cEEEEecCcEEEEEEcCCCc-eeEEeeecCCCCCceeECCCCCEEEEeCCCc
Q 032726 56 DVSVVVRKG-ALYTATNDGWVKYFILHNET-LVNWKHIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 56 di~avd~~G-~lYTg~~dG~I~ri~~~~~~-~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
++ ++.+|| .+.||..||.|.-|+. +++ ...+..-.++- ..++|+++|++++.-..-|
T Consensus 21 ~~-a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V-~~l~fspdg~~las~~~d~ 79 (577)
T 2ymu_A 21 GV-AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV-WGVAFSPDGQTIASASDDK 79 (577)
T ss_dssp EE-EECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCE-EEEEECTTSSEEEEEETTS
T ss_pred EE-EECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCE-EEEEECCCCCEEEEEeCCC
Confidence 67 688998 4889999999887865 443 23333223444 7899999998776444434
No 139
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.47 E-value=0.31 Score=38.84 Aligned_cols=70 Identities=11% Similarity=-0.029 Sum_probs=46.4
Q ss_pred CCceeeeeeC--CCcEEEEecCc----EEEEEEcCCCceeEEeee---c---CC-------CCCceeECC---CCCEEEE
Q 032726 53 HPEDVSVVVR--KGALYTATNDG----WVKYFILHNETLVNWKHI---D---SQ-------SLLGLTTTK---EGDVVIC 110 (135)
Q Consensus 53 GPEdi~avd~--~G~lYTg~~dG----~I~ri~~~~~~~~~~~~t---~---GR-------PpLGl~fd~---~G~LiVa 110 (135)
.-.++ ++|+ ++.+|.|+..| .|+|.+....+|+..... . ++ ....|++|+ .++||+.
T Consensus 56 ~v~~i-~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g 134 (394)
T 3b7f_A 56 TIHHI-VQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAG 134 (394)
T ss_dssp EEEEE-EECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEE
T ss_pred ceEEE-EECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEE
Confidence 45688 6887 78999999998 899985422345543211 1 11 112477884 6789998
Q ss_pred eCCCceEEeCCCC
Q 032726 111 DSKKVRQHTNSQA 123 (135)
Q Consensus 111 Da~~GLl~V~~~G 123 (135)
-...||++.+..|
T Consensus 135 ~~~ggl~~S~DgG 147 (394)
T 3b7f_A 135 TSPQGLFRSTDHG 147 (394)
T ss_dssp EETTEEEEESSTT
T ss_pred ecCCcEEEEcCCC
Confidence 8788999987765
No 140
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=92.46 E-value=0.62 Score=35.85 Aligned_cols=64 Identities=13% Similarity=0.062 Sum_probs=42.1
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCCceEEe
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHT 119 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V 119 (135)
.++ ++.++| .+.+|..||.|.-++...+.........+.+...++|+++|+++++-..-|.+++
T Consensus 126 ~~~-~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~i 190 (321)
T 3ow8_A 126 WTL-AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINI 190 (321)
T ss_dssp CCE-EECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEE-EECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEE
Confidence 357 578887 5899999999988876544432222223333378999999987765555554443
No 141
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.45 E-value=0.33 Score=38.74 Aligned_cols=61 Identities=8% Similarity=0.026 Sum_probs=40.8
Q ss_pred eCCCcEEEEecCcEEEEEEcCC--CceeEEe--eecCCCCCceeECC--CCCEEEEeCCC----ceEEeCCCC
Q 032726 61 VRKGALYTATNDGWVKYFILHN--ETLVNWK--HIDSQSLLGLTTTK--EGDVVICDSKK----VRQHTNSQA 123 (135)
Q Consensus 61 d~~G~lYTg~~dG~I~ri~~~~--~~~~~~~--~t~GRPpLGl~fd~--~G~LiVaDa~~----GLl~V~~~G 123 (135)
|++|.||.|+..| +++++..+ ..++... ..+.+- -.|.+|+ +++||++-..- ||++.+..|
T Consensus 20 d~~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v-~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G 90 (394)
T 3b7f_A 20 SGPVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTI-HHIVQDPREPERMLMAARTGHLGPTVFRSDDGG 90 (394)
T ss_dssp CSCCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEE-EEEEECSSSTTCEEEEEEC--CCEEEEEESSTT
T ss_pred CCCCEEEEEecCc-eEEEECCCCCCCceECCccCCCCce-EEEEECCCCCCeEEEEecCCCCCccEEEeCCCC
Confidence 6688999999999 66665533 3455432 223333 6788997 78899875544 798877655
No 142
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=92.40 E-value=0.96 Score=35.04 Aligned_cols=62 Identities=5% Similarity=0.078 Sum_probs=42.4
Q ss_pred eeeeeCCCc-EEEEecCcEEEEEEcCCCceeEEe---------------------------------eecCCCCCceeEC
Q 032726 57 VSVVVRKGA-LYTATNDGWVKYFILHNETLVNWK---------------------------------HIDSQSLLGLTTT 102 (135)
Q Consensus 57 i~avd~~G~-lYTg~~dG~I~ri~~~~~~~~~~~---------------------------------~t~GRPpLGl~fd 102 (135)
+ .+.++|. +++|..||.|.-|+..++....+. ....+- +.++|+
T Consensus 348 ~-~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~ 425 (447)
T 3dw8_B 348 C-CWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKI-LHTAWH 425 (447)
T ss_dssp E-EECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCC-CEEEEC
T ss_pred E-EECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCce-eEEEEC
Confidence 7 5888874 999999999988876444322111 112233 679999
Q ss_pred CCCCEEEEeCCCceEEeC
Q 032726 103 KEGDVVICDSKKVRQHTN 120 (135)
Q Consensus 103 ~~G~LiVaDa~~GLl~V~ 120 (135)
++|+++++-+..+++...
T Consensus 426 p~~~~la~~~~~~~~~~~ 443 (447)
T 3dw8_B 426 PKENIIAVATTNNLYIFQ 443 (447)
T ss_dssp SSSSEEEEECSSCEEEEE
T ss_pred CCCCEEEEEecceeeeec
Confidence 999988877776666544
No 143
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=92.39 E-value=0.45 Score=38.20 Aligned_cols=71 Identities=10% Similarity=0.062 Sum_probs=44.7
Q ss_pred CCceeeeeeCC-CcEEEEecCcEEEEEEcCCCcee-EEe-eecCCCCCc----eeECCCCCEEEEeC-CCceEEeCC-CC
Q 032726 53 HPEDVSVVVRK-GALYTATNDGWVKYFILHNETLV-NWK-HIDSQSLLG----LTTTKEGDVVICDS-KKVRQHTNS-QA 123 (135)
Q Consensus 53 GPEdi~avd~~-G~lYTg~~dG~I~ri~~~~~~~~-~~~-~t~GRPpLG----l~fd~~G~LiVaDa-~~GLl~V~~-~G 123 (135)
++|.. .+..| +.+|.+..+++|..+++.+.... .+. ...||| .. |++. +|.||+..- .--+.+||+ +|
T Consensus 126 ~~eG~-glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~-~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG 202 (262)
T 3nol_A 126 DGEGW-GLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEE-LPELNELEWV-DGEIFANVWQTNKIVRIDPETG 202 (262)
T ss_dssp SSCCC-CEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEE-CCCEEEEEEE-TTEEEEEETTSSEEEEECTTTC
T ss_pred CCCce-EEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcc-ccccceeEEE-CCEEEEEEccCCeEEEEECCCC
Confidence 34655 34433 47888887888888876443332 222 234787 54 5675 788998874 445788887 57
Q ss_pred eEE
Q 032726 124 LII 126 (135)
Q Consensus 124 ~v~ 126 (135)
+|+
T Consensus 203 ~V~ 205 (262)
T 3nol_A 203 KVT 205 (262)
T ss_dssp BEE
T ss_pred cEE
Confidence 765
No 144
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=92.37 E-value=0.49 Score=36.45 Aligned_cols=57 Identities=14% Similarity=0.187 Sum_probs=39.2
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCC
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSK 113 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~ 113 (135)
-++ ++.++| .+++|..||.|.-|+..++.. ..+..-.+.. .+++|+++|+.++.-+.
T Consensus 252 ~~~-~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v-~~v~~s~~g~~l~s~~~ 310 (321)
T 3ow8_A 252 LNV-AFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQV-WGVKYNGNGSKIVSVGD 310 (321)
T ss_dssp EEE-EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-EEEEECTTSSEEEEEET
T ss_pred EEE-EECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcE-EEEEECCCCCEEEEEeC
Confidence 467 577777 699999999998887644432 3333334555 89999999987655443
No 145
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=92.35 E-value=0.72 Score=34.21 Aligned_cols=63 Identities=17% Similarity=0.128 Sum_probs=42.1
Q ss_pred CCceeeeeeCCC-cEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeE--CCCCCEEEEeCCCceE
Q 032726 53 HPEDVSVVVRKG-ALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTT--TKEGDVVICDSKKVRQ 117 (135)
Q Consensus 53 GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~f--d~~G~LiVaDa~~GLl 117 (135)
.-.++ .+.++| .+++|..||.|.-|+..++.........+.. ..++| +++|+++++-..-|-+
T Consensus 88 ~v~~~-~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~l~~~~~dg~i 153 (368)
T 3mmy_A 88 PVLDV-CWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPV-KTIHWIKAPNYSCVMTGSWDKTL 153 (368)
T ss_dssp CEEEE-EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCE-EEEEEEECSSCEEEEEEETTSEE
T ss_pred CEEEE-EECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCce-EEEEEEeCCCCCEEEEccCCCcE
Confidence 34467 577777 5999999999998887555544333334544 78888 8888755554444433
No 146
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=92.26 E-value=0.41 Score=40.12 Aligned_cols=68 Identities=6% Similarity=0.036 Sum_probs=48.2
Q ss_pred eeeeeeCC-CcEEEEec----------CcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC--EEEEeCCCc-eEEeCC
Q 032726 56 DVSVVVRK-GALYTATN----------DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD--VVICDSKKV-RQHTNS 121 (135)
Q Consensus 56 di~avd~~-G~lYTg~~----------dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~--LiVaDa~~G-Ll~V~~ 121 (135)
-+ +++++ +++|...+ ..+|+-|+....+....-.++.+| .+|+|+++|+ ||+.+..-| +..+|.
T Consensus 284 ~~-a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~-~~lavs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 284 QV-AYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEI-DSINVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp CE-EEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEE-CEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred ee-eECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCc-ceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 37 68865 48999876 258999988655555545677787 9999999985 788776544 556664
Q ss_pred -CCeE
Q 032726 122 -QALI 125 (135)
Q Consensus 122 -~G~v 125 (135)
+|++
T Consensus 362 ~t~k~ 366 (386)
T 3sjl_D 362 ESGEE 366 (386)
T ss_dssp TTCCE
T ss_pred CCCcE
Confidence 4543
No 147
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=92.24 E-value=0.49 Score=35.50 Aligned_cols=59 Identities=8% Similarity=0.075 Sum_probs=39.6
Q ss_pred ceeeeeeCCCc-EEEEecCcEEEEEEcCCCc---eeEEeeecCCCCCceeECCCCCEEEEeCCCc
Q 032726 55 EDVSVVVRKGA-LYTATNDGWVKYFILHNET---LVNWKHIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 55 Edi~avd~~G~-lYTg~~dG~I~ri~~~~~~---~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
-++ ++.++|. +++|..||.|.-|+..++. ...+..-.+.. ..++|+++|+++++-...|
T Consensus 12 ~~~-~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~~~~~dg 74 (372)
T 1k8k_C 12 SCH-AWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQV-TGVDWAPDSNRIVTCGTDR 74 (372)
T ss_dssp CEE-EECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCE-EEEEEETTTTEEEEEETTS
T ss_pred EEE-EECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcc-cEEEEeCCCCEEEEEcCCC
Confidence 477 6888884 7889899999888775543 23333333444 7899999988666544434
No 148
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=92.02 E-value=1 Score=34.26 Aligned_cols=62 Identities=10% Similarity=0.096 Sum_probs=42.7
Q ss_pred CceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCceEE
Q 032726 54 PEDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQH 118 (135)
Q Consensus 54 PEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~ 118 (135)
-.++ ++.++| .+.+|..||.|.-|+...+.. ..+. ..... ..++|+++|.++++-...|+..
T Consensus 199 v~~~-~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v-~~~~~sp~~~~la~~~~~~i~v 262 (319)
T 3frx_A 199 INTL-TASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS-AQDEV-FSLAFSPNRYWLAAATATGIKV 262 (319)
T ss_dssp EEEE-EECTTSSEEEEEETTCEEEEEETTTTEEEEEEE-CCSCE-EEEEECSSSSEEEEEETTEEEE
T ss_pred EEEE-EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCcE-EEEEEcCCCCEEEEEcCCCcEE
Confidence 3467 577888 589999999998887644432 2222 23344 8899999999887766666433
No 149
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.01 E-value=0.75 Score=39.83 Aligned_cols=64 Identities=13% Similarity=0.201 Sum_probs=46.6
Q ss_pred eeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeeecC-------CCCCceeECCCCCEEEEeCCCceEEeCCC
Q 032726 56 DVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHIDS-------QSLLGLTTTKEGDVVICDSKKVRQHTNSQ 122 (135)
Q Consensus 56 di~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~G-------RPpLGl~fd~~G~LiVaDa~~GLl~V~~~ 122 (135)
++ +.|++|+||.|+ +|-|.++++.++..+.+..... .- ..|..|++|+|+|+-...||.+++++
T Consensus 377 ~i-~~d~~g~lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~i~~d~~g~lWigT~~~Gl~~~~~~ 447 (758)
T 3ott_A 377 HI-YEDKEQQLWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWT-YYIFEDTAGQLWISTCLGGIFVVDKH 447 (758)
T ss_dssp EE-EECTTSCEEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSE-EEEEECTTSEEEEEESSSCEEEEEHH
T ss_pred EE-EECCCCCEEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceE-EEEEEcCCCCEEEEECCCceEEEccc
Confidence 56 578899999999 5679999875555555432211 12 35677899999999888899998854
No 150
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.00 E-value=0.49 Score=36.73 Aligned_cols=59 Identities=14% Similarity=0.302 Sum_probs=37.1
Q ss_pred CCCcEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCCceEEeC
Q 032726 62 RKGALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTN 120 (135)
Q Consensus 62 ~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~ 120 (135)
.+|.+|.++.+|.|+.++..+++......+.+.+....-...+|+|||.+..-+|..++
T Consensus 317 ~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 317 YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 36899999999999999876655332233423331222223467788877766666554
No 151
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=91.91 E-value=0.64 Score=35.12 Aligned_cols=61 Identities=8% Similarity=0.050 Sum_probs=38.8
Q ss_pred CCceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCc
Q 032726 53 HPEDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 53 GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
.-.++ ++.++| .+.||..||.|.-|+..++.. ..+....+ |...++|.++|++++.-+.-|
T Consensus 15 ~V~~~-~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~s~d~ 77 (304)
T 2ynn_A 15 RVKGI-DFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTET-PVRAGKFIARKNWIIVGSDDF 77 (304)
T ss_dssp CEEEE-EECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEEEGGGTEEEEEETTS
T ss_pred ceEEE-EECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCC-cEEEEEEeCCCCEEEEECCCC
Confidence 34578 688888 599999999999887644432 22222222 325677888877655444434
No 152
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=91.80 E-value=0.19 Score=41.41 Aligned_cols=57 Identities=12% Similarity=0.165 Sum_probs=41.6
Q ss_pred eEeccCCcCCCceeeeeeCCCc-EEEEec--CcEEEEEEcCCCceeEEeeecCCCCCceeECCC
Q 032726 44 IKLGEGCVSHPEDVSVVVRKGA-LYTATN--DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKE 104 (135)
Q Consensus 44 e~l~~g~~~GPEdi~avd~~G~-lYTg~~--dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~ 104 (135)
.+|..|. +|+.+ ++++||+ +|..+. ++.|--|+..+.+...--.++++| -||.++++
T Consensus 308 ~~i~vg~--~p~gi-~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P-~~i~~~~~ 367 (368)
T 1mda_H 308 GPISNGH--DSDAI-IAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGP-ESLSVQNE 367 (368)
T ss_dssp ECCEEEE--EECEE-EECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCC-CEEECCCC
T ss_pred EEEECCC--CcceE-EECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCC-CEEEeecC
Confidence 3454543 79999 7999985 666665 899999987555554445678888 99998764
No 153
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=91.76 E-value=0.73 Score=38.60 Aligned_cols=68 Identities=13% Similarity=0.216 Sum_probs=51.0
Q ss_pred cCCCceeeee--eC-CCc--EEEEecCcEEEEEEc---CCCce--eE--EeeecCCCCCceeEC-CCCCEEEEeCCCceE
Q 032726 51 VSHPEDVSVV--VR-KGA--LYTATNDGWVKYFIL---HNETL--VN--WKHIDSQSLLGLTTT-KEGDVVICDSKKVRQ 117 (135)
Q Consensus 51 ~~GPEdi~av--d~-~G~--lYTg~~dG~I~ri~~---~~~~~--~~--~~~t~GRPpLGl~fd-~~G~LiVaDa~~GLl 117 (135)
+..|..+ +. ++ +|. +|...++|++..|+. .++.. +. --..++.| =|+..| ..|.|||++-..|++
T Consensus 127 ~~~pyGl-cly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~-EgcvvDd~~g~Lyv~eEd~GIw 204 (355)
T 3amr_A 127 INEVYGF-TLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQT-EGMAADDEYGRLYIAEEDEAIW 204 (355)
T ss_dssp CSSCCCE-EEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCE-EEEEEETTTTEEEEEETTTEEE
T ss_pred CCCeeEE-EEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCc-ceEEEcCCCCeEEEecccceEE
Confidence 4788888 57 64 453 889999999988644 22222 11 12467888 899999 578999999999999
Q ss_pred EeC
Q 032726 118 HTN 120 (135)
Q Consensus 118 ~V~ 120 (135)
+++
T Consensus 205 ~~d 207 (355)
T 3amr_A 205 KFS 207 (355)
T ss_dssp EEE
T ss_pred EEe
Confidence 999
No 154
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=91.73 E-value=0.56 Score=33.43 Aligned_cols=58 Identities=9% Similarity=0.025 Sum_probs=36.9
Q ss_pred CcEEEEe---cCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCCceEEeCCC
Q 032726 64 GALYTAT---NDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTNSQ 122 (135)
Q Consensus 64 G~lYTg~---~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~~~ 122 (135)
|..|++. .|+.|+.++..++....+....+.. -.++|+++|+.+++.....+..++.+
T Consensus 10 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~v-~~~~~spdg~~l~~~~~~~i~~~d~~ 70 (297)
T 2ojh_A 10 TRLSTGPGGSMRSSIEIFNIRTRKMRVVWQTPELF-EAPNWSPDGKYLLLNSEGLLYRLSLA 70 (297)
T ss_dssp --------CCCCEEEEEEETTTTEEEEEEEESSCC-EEEEECTTSSEEEEEETTEEEEEESS
T ss_pred eeEeecCCCCcceeEEEEeCCCCceeeeccCCcce-EeeEECCCCCEEEEEcCCeEEEEeCC
Confidence 5566654 4788999987555555555556666 89999999997777666667777643
No 155
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=91.56 E-value=0.71 Score=34.98 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=41.6
Q ss_pred CceeeeeeCCC-cEEEEecCcEEEEEEcCCCc-eeEEeeecCCCCCceeECCCCCEE-EEeCCCceEEeC
Q 032726 54 PEDVSVVVRKG-ALYTATNDGWVKYFILHNET-LVNWKHIDSQSLLGLTTTKEGDVV-ICDSKKVRQHTN 120 (135)
Q Consensus 54 PEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~-~~~~~~t~GRPpLGl~fd~~G~Li-VaDa~~GLl~V~ 120 (135)
--++ ++.++| .+++|..||.|.-|+. ++. ...+..-.+.. ..++|+++|+.+ .+....-+...+
T Consensus 111 v~~~-~~s~~~~~l~~~~~dg~i~i~~~-~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~iwd 177 (425)
T 1r5m_A 111 VTCL-AWSHDGNSIVTGVENGELRLWNK-TGALLNVLNFHRAPI-VSVKWNKDGTHIISMDVENVTILWN 177 (425)
T ss_dssp EEEE-EECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCCSCE-EEEEECTTSSEEEEEETTCCEEEEE
T ss_pred eEEE-EEcCCCCEEEEEeCCCeEEEEeC-CCCeeeeccCCCccE-EEEEECCCCCEEEEEecCCeEEEEE
Confidence 3456 577777 5899999999988874 443 33333334444 889999998754 454444444444
No 156
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=91.54 E-value=1.5 Score=32.63 Aligned_cols=62 Identities=13% Similarity=0.090 Sum_probs=40.7
Q ss_pred CCCceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCc
Q 032726 52 SHPEDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 52 ~GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
.+-.++ .+.++| .+++|..||.|.-|+..++.. ..+..-.+.- ..+.|++++++++.-..-|
T Consensus 66 ~~v~~~-~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~s~~~d~ 129 (312)
T 4ery_A 66 LGISDV-AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDE 129 (312)
T ss_dssp SCEEEE-EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-EEEEECSSSSEEEEEETTS
T ss_pred CceEEE-EEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCE-EEEEEcCCCCEEEEEeCCC
Confidence 345577 588777 599999999999887654432 2233223444 6788888887666444444
No 157
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=91.54 E-value=0.68 Score=37.41 Aligned_cols=67 Identities=19% Similarity=0.225 Sum_probs=44.0
Q ss_pred CceeeeeeCCC-cEEEEecCcEEEEEEcCCCc-eeEEeeecCCCCCceeECCCCCEEEEeCCCceEE-eCCCC
Q 032726 54 PEDVSVVVRKG-ALYTATNDGWVKYFILHNET-LVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQH-TNSQA 123 (135)
Q Consensus 54 PEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~-~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~-V~~~G 123 (135)
..++ ++.++| .+.++..||.|.-|+. ++. ...+..-.++. ..++|.++|++++.-..-|.++ .|.+|
T Consensus 470 v~~~-~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v-~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 470 VRGV-AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV-RGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp EEEE-EECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCE-EEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred EEEE-EEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCE-EEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 3567 688887 5888999999988875 443 33343334555 7899999998665444445444 34444
No 158
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=91.51 E-value=0.48 Score=35.21 Aligned_cols=62 Identities=11% Similarity=0.003 Sum_probs=41.3
Q ss_pred CCceeeeeeCCCc--EEEEecCcEEEEEEc-CCCceeEEee--ecCCCCCceeECCCCCEEEEeCCCceE
Q 032726 53 HPEDVSVVVRKGA--LYTATNDGWVKYFIL-HNETLVNWKH--IDSQSLLGLTTTKEGDVVICDSKKVRQ 117 (135)
Q Consensus 53 GPEdi~avd~~G~--lYTg~~dG~I~ri~~-~~~~~~~~~~--t~GRPpLGl~fd~~G~LiVaDa~~GLl 117 (135)
...++ ++.++|. +++|..||.|.-|+. .++....+.. ..+.. ..++|++ ++++++-+.-|-+
T Consensus 58 ~v~~~-~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v-~~l~~~~-~~~l~s~~~d~~i 124 (342)
T 1yfq_A 58 PLLCC-NFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGI-CRICKYG-DDKLIAASWDGLI 124 (342)
T ss_dssp CEEEE-EEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCE-EEEEEET-TTEEEEEETTSEE
T ss_pred ceEEE-EECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCce-EEEEeCC-CCEEEEEcCCCeE
Confidence 44577 5777777 999999999999976 5555444433 33444 7888988 7766554444433
No 159
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=91.43 E-value=0.82 Score=33.21 Aligned_cols=26 Identities=15% Similarity=0.230 Sum_probs=20.2
Q ss_pred CceeeeeeCCC-----cEEEEecCcEEEEEEc
Q 032726 54 PEDVSVVVRKG-----ALYTATNDGWVKYFIL 80 (135)
Q Consensus 54 PEdi~avd~~G-----~lYTg~~dG~I~ri~~ 80 (135)
-.++ .+.++| .++||..||.|.-|+.
T Consensus 217 i~~~-~~~p~~~~~~~~l~s~~~dg~i~iwd~ 247 (351)
T 3f3f_A 217 IRSI-SWAPSIGRWYQLIATGCKDGRIRIFKI 247 (351)
T ss_dssp EEEE-EECCCSSCSSEEEEEEETTSCEEEEEE
T ss_pred eeEE-EECCCCCCcceEEEEEcCCCeEEEEeC
Confidence 3467 577886 5999999999877765
No 160
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=91.35 E-value=0.74 Score=35.06 Aligned_cols=61 Identities=15% Similarity=0.215 Sum_probs=41.9
Q ss_pred CCCceeeeeeCCCcEEEEecCcEEEEEEcCCCce-eEEee---e---cCCCCCceeECCCCCEEEEeCCC
Q 032726 52 SHPEDVSVVVRKGALYTATNDGWVKYFILHNETL-VNWKH---I---DSQSLLGLTTTKEGDVVICDSKK 114 (135)
Q Consensus 52 ~GPEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~-~~~~~---t---~GRPpLGl~fd~~G~LiVaDa~~ 114 (135)
....++ .+.++|.+++|..||.|.-|+..++.. ..+.. - .+.. ..++|+++|+++++-...
T Consensus 187 ~~i~~~-~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i-~~i~~~~~~~~l~~~~~d 254 (397)
T 1sq9_A 187 QFATSV-DISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI-RSVKFSPQGSLLAIAHDS 254 (397)
T ss_dssp CCCCEE-EECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCE-EEEEECSSTTEEEEEEEE
T ss_pred CCceEE-EECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCcc-ceEEECCCCCEEEEEecC
Confidence 345678 688777999999999999998754433 22222 1 3444 899999999877655444
No 161
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=91.28 E-value=0.88 Score=35.41 Aligned_cols=64 Identities=19% Similarity=0.258 Sum_probs=42.1
Q ss_pred CCceeeeeeCCC-cEEEEecCcE-EEEEEcCCCce-eEEee--ecCCCCCceeECCCCCEEEEeCCCceEE
Q 032726 53 HPEDVSVVVRKG-ALYTATNDGW-VKYFILHNETL-VNWKH--IDSQSLLGLTTTKEGDVVICDSKKVRQH 118 (135)
Q Consensus 53 GPEdi~avd~~G-~lYTg~~dG~-I~ri~~~~~~~-~~~~~--t~GRPpLGl~fd~~G~LiVaDa~~GLl~ 118 (135)
.-.++ ++.++| .+.||..||. |.-|+..++.. ..+.. -.+.- ..++|+++|+++++-+.-|-++
T Consensus 197 ~v~~~-~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v-~~~~~s~~~~~l~s~s~d~~v~ 265 (355)
T 3vu4_A 197 PIKMV-RLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADV-VDMKWSTDGSKLAVVSDKWTLH 265 (355)
T ss_dssp CEEEE-EECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCE-EEEEECTTSCEEEEEETTCEEE
T ss_pred ceEEE-EECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcE-EEEEECCCCCEEEEEECCCEEE
Confidence 34577 688888 5899999998 66666544432 33331 23444 7899999998777655555443
No 162
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=91.26 E-value=0.93 Score=35.61 Aligned_cols=62 Identities=18% Similarity=0.248 Sum_probs=40.2
Q ss_pred ceeeeeeCCCcEEEEecCcEEEEEEcCCCce-eEEe--ee--cCCCCCceeECCCCCEEEEeCCCceEE
Q 032726 55 EDVSVVVRKGALYTATNDGWVKYFILHNETL-VNWK--HI--DSQSLLGLTTTKEGDVVICDSKKVRQH 118 (135)
Q Consensus 55 Edi~avd~~G~lYTg~~dG~I~ri~~~~~~~-~~~~--~t--~GRPpLGl~fd~~G~LiVaDa~~GLl~ 118 (135)
.++ ++.+++.+.+|..||.|.-|+..+++. .... .. .+.- ..++|+++|++++.-..-|-++
T Consensus 86 ~~~-~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V-~~v~~spdg~~l~sgs~d~~i~ 152 (344)
T 4gqb_B 86 ADL-TWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIV-STVSVLSSGTQAVSGSKDICIK 152 (344)
T ss_dssp EEE-EEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCE-EEEEECTTSSEEEEEETTSCEE
T ss_pred EEE-EEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCE-EEEEECCCCCEEEEEeCCCeEE
Confidence 357 577889999999999988777644432 1111 11 2334 7899999998766544444333
No 163
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=91.22 E-value=1.5 Score=33.53 Aligned_cols=57 Identities=9% Similarity=0.155 Sum_probs=37.9
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCC
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSK 113 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~ 113 (135)
.++ ++.++| .+++|..||.|.-|+..++.. ..+..-.+.. ..++|+++|+.++.-+.
T Consensus 80 ~~~-~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v-~~v~~sp~~~~l~s~~~ 138 (343)
T 2xzm_R 80 SDL-ALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEV-YSVAFSPDNRQILSAGA 138 (343)
T ss_dssp EEE-EECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCE-EEEEECSSTTEEEEEET
T ss_pred EEE-EECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcE-EEEEECCCCCEEEEEcC
Confidence 467 577777 578999999998887654432 2333223444 78999999876554333
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=91.21 E-value=0.44 Score=39.41 Aligned_cols=70 Identities=7% Similarity=-0.152 Sum_probs=47.1
Q ss_pred ceeeeeeCCCc-EEEEecC----cEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCC---ceEEeCCC-CeE
Q 032726 55 EDVSVVVRKGA-LYTATND----GWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKK---VRQHTNSQ-ALI 125 (135)
Q Consensus 55 Edi~avd~~G~-lYTg~~d----G~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~---GLl~V~~~-G~v 125 (135)
-++ ++++||+ ++++..| +.|+.++..++..+.+....|.. ..++|++||+.++.-... -|..+|.+ |..
T Consensus 153 ~~~-~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~-~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 153 FGF-VSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSF-SSASISPGMKVTAGLETAREARLVTVDPRDGSV 230 (582)
T ss_dssp CEE-EEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEE-EEEEECTTSCEEEEEECSSCEEEEEECTTTCCE
T ss_pred ceE-EECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCcc-ccceECCCCCEEEEccCCCeeEEEEEcCCCCcE
Confidence 678 6888985 6667766 78999986556655554444555 678999999865533333 47777754 554
Q ss_pred E
Q 032726 126 I 126 (135)
Q Consensus 126 ~ 126 (135)
+
T Consensus 231 ~ 231 (582)
T 3o4h_A 231 E 231 (582)
T ss_dssp E
T ss_pred E
Confidence 4
No 165
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=90.91 E-value=1.5 Score=33.78 Aligned_cols=67 Identities=13% Similarity=0.100 Sum_probs=44.3
Q ss_pred CCCceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCc-eEEeC
Q 032726 52 SHPEDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKV-RQHTN 120 (135)
Q Consensus 52 ~GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G-Ll~V~ 120 (135)
..-.++ ++.++| .+++|..||.|.-|+..++.. ..+..-.+.. ..++|+++|++++.-..-| +...|
T Consensus 140 ~~v~~~-~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~~~d~~v~iwd 209 (420)
T 3vl1_A 140 SEITKL-KFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATV-TDIAIIDRGRNVLSASLDGTIRLWE 209 (420)
T ss_dssp SCEEEE-EECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCE-EEEEEETTTTEEEEEETTSCEEEEE
T ss_pred CccEEE-EECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcE-EEEEEcCCCCEEEEEcCCCcEEEeE
Confidence 344567 577777 599999999999998754432 3343334444 7899999988666544444 43444
No 166
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=90.86 E-value=1.1 Score=34.21 Aligned_cols=64 Identities=9% Similarity=0.087 Sum_probs=42.4
Q ss_pred CCCceeeeeeCCCc--EEEEecCcEEEEEEcCC----Cce-eEEeeecCCCCCceeECC-CCCEEEEeCCCceEE
Q 032726 52 SHPEDVSVVVRKGA--LYTATNDGWVKYFILHN----ETL-VNWKHIDSQSLLGLTTTK-EGDVVICDSKKVRQH 118 (135)
Q Consensus 52 ~GPEdi~avd~~G~--lYTg~~dG~I~ri~~~~----~~~-~~~~~t~GRPpLGl~fd~-~G~LiVaDa~~GLl~ 118 (135)
..-.++ ++.++|. +++|..||.|.-|+... +.. ..+. ..+.. ..++|++ +|+++++-..-|-++
T Consensus 205 ~~v~~~-~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~v-~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 205 AKVTHA-EFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMP-HEKPV-NAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp SCEEEE-EECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEE-CSSCE-EEEEECTTTSCEEEEEESSSEEE
T ss_pred CcEEEE-EECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEec-CCCce-EEEEEcCCCCCEEEEEcCCCcEE
Confidence 345577 6888885 99999999998887643 222 2222 33444 8999999 998766555444443
No 167
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=90.75 E-value=1.2 Score=34.69 Aligned_cols=67 Identities=9% Similarity=0.064 Sum_probs=41.5
Q ss_pred CCCceeeeeeCCC--cEEEEecCcEEEEEEcCCCcee-EE--eeecCCCCCceeECCCCCEEEEeCCCc-eEEeC
Q 032726 52 SHPEDVSVVVRKG--ALYTATNDGWVKYFILHNETLV-NW--KHIDSQSLLGLTTTKEGDVVICDSKKV-RQHTN 120 (135)
Q Consensus 52 ~GPEdi~avd~~G--~lYTg~~dG~I~ri~~~~~~~~-~~--~~t~GRPpLGl~fd~~G~LiVaDa~~G-Ll~V~ 120 (135)
....++ .+.++| .+++|..||.|.-|+..++... .+ ..-.+.. ..++|+++|+++++-..-| +...|
T Consensus 132 ~~v~~~-~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~iwd 204 (402)
T 2aq5_A 132 KRVGIV-AWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTI-YSVDWSRDGALICTSCRDKRVRVIE 204 (402)
T ss_dssp SCEEEE-EECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCE-EEEEECTTSSCEEEEETTSEEEEEE
T ss_pred CeEEEE-EECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCce-EEEEECCCCCEEEEEecCCcEEEEe
Confidence 344567 577776 5899999999988876544432 22 1123444 7889998887555433333 33334
No 168
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=90.64 E-value=1.7 Score=31.47 Aligned_cols=61 Identities=25% Similarity=0.320 Sum_probs=39.0
Q ss_pred CCceeeeeeCCC-cEEEEecCcEEEEEEcCCCc-----eeEEeeecCCCCCceeECC--CCCEEEEeCCCc
Q 032726 53 HPEDVSVVVRKG-ALYTATNDGWVKYFILHNET-----LVNWKHIDSQSLLGLTTTK--EGDVVICDSKKV 115 (135)
Q Consensus 53 GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~-----~~~~~~t~GRPpLGl~fd~--~G~LiVaDa~~G 115 (135)
.--++ .++++| .+.+|..||.|.-|+..++. ...+..-.+.. ..++|.+ +++++++-..-|
T Consensus 13 ~v~~~-~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 13 LVHDV-VYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSI-VAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp CEEEE-EECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCE-EEEEECCGGGCSEEEEEETTS
T ss_pred ceeEE-EEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcE-EEEEEcCCCCCCEEEEEcCCC
Confidence 34567 588887 59999999999888764332 11222233444 7888987 577666544444
No 169
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=90.61 E-value=0.73 Score=34.21 Aligned_cols=65 Identities=11% Similarity=0.106 Sum_probs=40.4
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCc----eeEEeeecCCCCCceeECCCCC-EEE-EeCCCceEEeCC
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNET----LVNWKHIDSQSLLGLTTTKEGD-VVI-CDSKKVRQHTNS 121 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~----~~~~~~t~GRPpLGl~fd~~G~-LiV-aDa~~GLl~V~~ 121 (135)
-++ .+.++| .+++|..||.|.-|+..++. ........+.. ..++|+++|+ +++ +....-+...+.
T Consensus 15 ~~~-~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 15 SDI-KIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPL-LCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp EEE-EEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCE-EEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred EEE-EEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCce-EEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 466 577777 58999999998777654443 23333334444 8899998888 444 443333444443
No 170
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=90.53 E-value=1.5 Score=33.55 Aligned_cols=60 Identities=15% Similarity=0.025 Sum_probs=40.5
Q ss_pred CceeeeeeCCC-cEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEEeCCCc
Q 032726 54 PEDVSVVVRKG-ALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVICDSKKV 115 (135)
Q Consensus 54 PEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVaDa~~G 115 (135)
..++ ++.++| .+++|..||.|.-|+........+..-.+.. ..++|+++|+ +++.-..-|
T Consensus 166 v~~~-~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v-~~~~~~~~~~~~l~s~~~d~ 227 (383)
T 3ei3_B 166 YCCV-DVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKV-THAEFNPRCDWLMATSSVDA 227 (383)
T ss_dssp EEEE-EEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCE-EEEEECSSCTTEEEEEETTS
T ss_pred eEEE-EECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcE-EEEEECCCCCCEEEEEeCCC
Confidence 4577 577776 6999999999999987332333443334555 7899999887 655544444
No 171
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=90.52 E-value=1.3 Score=33.63 Aligned_cols=59 Identities=14% Similarity=0.222 Sum_probs=39.7
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCc
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
.++ ++.++| .++||..||.|.-|+..++.. ..+..-.+.- ..++|++++++++.-+.-|
T Consensus 69 ~~~-~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~s~D~ 129 (319)
T 3frx_A 69 QDC-TLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDV-MSVDIDKKASMIISGSRDK 129 (319)
T ss_dssp EEE-EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-EEEEECTTSCEEEEEETTS
T ss_pred EEE-EECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcE-EEEEEcCCCCEEEEEeCCC
Confidence 456 577777 589999999998887754442 3333333444 7888999888766544444
No 172
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=90.49 E-value=0.84 Score=35.82 Aligned_cols=55 Identities=18% Similarity=0.149 Sum_probs=37.6
Q ss_pred CceeeeeeCCCc-EEEEecCcEEEEEEcCCCce-eEEee-ecCCCCCceeECCCCCEEEE
Q 032726 54 PEDVSVVVRKGA-LYTATNDGWVKYFILHNETL-VNWKH-IDSQSLLGLTTTKEGDVVIC 110 (135)
Q Consensus 54 PEdi~avd~~G~-lYTg~~dG~I~ri~~~~~~~-~~~~~-t~GRPpLGl~fd~~G~LiVa 110 (135)
--++ ++.++|+ |.+|..||.|.=|+..+++. ..+.. -.++. ..++|.++|++++-
T Consensus 272 V~~~-~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V-~~v~fSpdg~~laS 329 (365)
T 4h5i_A 272 ITSM-DVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAI-TEVTISPDSTYVAS 329 (365)
T ss_dssp EEEE-EECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCE-EEEEECTTSCEEEE
T ss_pred eEeE-EECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCE-EEEEECCCCCEEEE
Confidence 3567 6888884 88999999998887644443 22211 12344 79999999998653
No 173
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=90.46 E-value=2.4 Score=33.89 Aligned_cols=65 Identities=18% Similarity=0.184 Sum_probs=47.4
Q ss_pred CceeeeeeCCCcEEEEec-CcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCCceEEeCCC
Q 032726 54 PEDVSVVVRKGALYTATN-DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTNSQ 122 (135)
Q Consensus 54 PEdi~avd~~G~lYTg~~-dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~~~ 122 (135)
.|.+ +++ ++++|..+. +++++.++..+.+...--...|.+ .|+.+|. +.||+.|..--|..+|++
T Consensus 89 geGi-t~~-g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG-~glt~dg-~~L~~SdGs~~i~~iDp~ 154 (262)
T 3nol_A 89 GEGI-SDW-KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG-WGLTHND-QYLIMSDGTPVLRFLDPE 154 (262)
T ss_dssp EEEE-EEE-TTEEEEEESSSSEEEEEETTTCCEEEEEECSSCC-CCEEECS-SCEEECCSSSEEEEECTT
T ss_pred eeEE-EEe-CCEEEEEEeeCCEEEEEECccCcEEEEEECCCCc-eEEecCC-CEEEEECCCCeEEEEcCC
Confidence 4778 465 459999974 889999987544432223446777 8999875 589999976679999975
No 174
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=90.34 E-value=3.1 Score=33.47 Aligned_cols=66 Identities=15% Similarity=0.147 Sum_probs=47.0
Q ss_pred CCceeeeeeCCCcEEEEe-cCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCCceEEeCCC
Q 032726 53 HPEDVSVVVRKGALYTAT-NDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTNSQ 122 (135)
Q Consensus 53 GPEdi~avd~~G~lYTg~-~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~~~ 122 (135)
-.|.+ +++ ++++|..+ ++++++.++..+.+...--...+.+ .|+..|. +.||+.|..-=|..+|++
T Consensus 97 FgeGi-t~~-g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG-wGLt~Dg-~~L~vSdGs~~l~~iDp~ 163 (268)
T 3nok_A 97 FAEGL-ASD-GERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEG-WGLCYWN-GKLVRSDGGTMLTFHEPD 163 (268)
T ss_dssp CEEEE-EEC-SSCEEEEESSSCEEEEEETTTTEEEEEEECSSCC-CCEEEET-TEEEEECSSSEEEEECTT
T ss_pred ceeEE-EEe-CCEEEEEEccCCEEEEEECCcCcEEEEEeCCCce-eEEecCC-CEEEEECCCCEEEEEcCC
Confidence 34778 465 45899986 5788888987544432222346777 8999875 479999987778888975
No 175
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=90.29 E-value=0.58 Score=37.33 Aligned_cols=61 Identities=16% Similarity=0.200 Sum_probs=32.8
Q ss_pred CCCcEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEe-CCCceEEeCC-CCe
Q 032726 62 RKGALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICD-SKKVRQHTNS-QAL 124 (135)
Q Consensus 62 ~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaD-a~~GLl~V~~-~G~ 124 (135)
.+|.+|+|+.||.|+.++..+++ +.|....+.. ....+..+|.+|+.. ....|..+|. +|+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~-~~W~~~~~~~-~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~ 70 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGS-IKWTLKEDPV-LQVPTHVEEPAFLPDPNDGSLYTLGSKNNE 70 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCC-EEEEEECCCS-CCCC-----CCEEECTTTCCEEEC-----C
T ss_pred eCCEEEEEcCCCEEEEEECCCCC-EEEEecCCCc-eecceEcCCCEEEEeCCCCEEEEEECCCCc
Confidence 46899999999999999875554 3344333443 555455556666653 3334556664 454
No 176
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=90.15 E-value=1.8 Score=32.41 Aligned_cols=66 Identities=12% Similarity=0.005 Sum_probs=44.1
Q ss_pred CCceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCceEEeC
Q 032726 53 HPEDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTN 120 (135)
Q Consensus 53 GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~ 120 (135)
...++ .++++| .++++..||.|.-|+..++.. ..+..-.+.. ..++|+++|+++++-....+...+
T Consensus 204 ~v~~~-~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~d~~i~i~~ 271 (372)
T 1k8k_C 204 WVHGV-CFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPL-LAVTFITESSLVAAGHDCFPVLFT 271 (372)
T ss_dssp CEEEE-EECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCE-EEEEEEETTEEEEEETTSSCEEEE
T ss_pred eEEEE-EECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCe-EEEEEecCCCEEEEEeCCeEEEEE
Confidence 34577 587777 799999999998887744433 3333223333 789999999887766554444433
No 177
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=90.13 E-value=2.5 Score=31.14 Aligned_cols=56 Identities=13% Similarity=0.119 Sum_probs=34.8
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeC
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDS 112 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa 112 (135)
.++ ++.++| .+++|..||.|.-|+....... ....++.+.-.+.|.+++.++.+-.
T Consensus 219 ~~~-~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~ 275 (340)
T 4aow_A 219 NTV-TVSPDGSLCASGGKDGQAMLWDLNEGKHL-YTLDGGDIINALCFSPNRYWLCAAT 275 (340)
T ss_dssp EEE-EECTTSSEEEEEETTCEEEEEETTTTEEE-EEEECSSCEEEEEECSSSSEEEEEE
T ss_pred EEE-EECCCCCEEEEEeCCCeEEEEEeccCcee-eeecCCceEEeeecCCCCceeeccC
Confidence 467 588887 5899999999988876433322 1222233335666777766655443
No 178
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=90.06 E-value=1.4 Score=32.73 Aligned_cols=62 Identities=10% Similarity=0.136 Sum_probs=41.0
Q ss_pred CCceeeeeeC-CC-cEEEEecCcEEEEEEcCCCce-eEE---eeecCCCCCceeECCCCCEEEEeCCCce
Q 032726 53 HPEDVSVVVR-KG-ALYTATNDGWVKYFILHNETL-VNW---KHIDSQSLLGLTTTKEGDVVICDSKKVR 116 (135)
Q Consensus 53 GPEdi~avd~-~G-~lYTg~~dG~I~ri~~~~~~~-~~~---~~t~GRPpLGl~fd~~G~LiVaDa~~GL 116 (135)
.-.++ .+.+ +| .+++|..||.|.-|+..++.. ..+ ....+.. ..++|+++|+.+++-..-|-
T Consensus 117 ~i~~~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~ 184 (366)
T 3k26_A 117 AINEL-KFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEV-LSADYDLLGEKIMSCGMDHS 184 (366)
T ss_dssp CEEEE-EECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCE-EEEEECTTSSEEEEEETTSC
T ss_pred cEEEE-EECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCce-eEEEECCCCCEEEEecCCCC
Confidence 34567 5766 66 599999999999998754443 222 1234445 89999999987665444443
No 179
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=89.94 E-value=1.1 Score=34.35 Aligned_cols=57 Identities=5% Similarity=0.130 Sum_probs=38.1
Q ss_pred eeeCCCcEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCce
Q 032726 59 VVVRKGALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKVR 116 (135)
Q Consensus 59 avd~~G~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GL 116 (135)
.+.+++.++++..||.|.-|+..++.. ..+..-.+.. ..++|+++|++++.-+.-|-
T Consensus 150 ~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~sg~~d~~ 207 (340)
T 1got_B 150 RFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV-MSLSLAPDTRLFVSGACDAS 207 (340)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-EEEEECTTSSEEEEEETTSC
T ss_pred EECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCce-EEEEECCCCCEEEEEeCCCc
Confidence 355778999999999999887644432 2232223444 78889988887765444443
No 180
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=89.89 E-value=0.63 Score=35.41 Aligned_cols=67 Identities=16% Similarity=0.013 Sum_probs=47.6
Q ss_pred CceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-----eEEeeecCCCCCceeECCCCCEEEEeCCCceEEeCCC
Q 032726 54 PEDVSVVVRKG-ALYTATNDGWVKYFILHNETL-----VNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTNSQ 122 (135)
Q Consensus 54 PEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-----~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~~~ 122 (135)
..++ ++.++| .+++|..||.|.-|+..++.. ..+..-.+.. ..++|+++|+++++-...++...+.+
T Consensus 208 v~~~-~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 208 VHAV-GFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPL-RSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp EEEE-EECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCE-EEEEEEETTEEEEEESSSSEEEECCC
T ss_pred EEEE-EECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCce-EEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 4567 588888 599999999998877644432 2233333444 78999999998888888888887754
No 181
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=89.89 E-value=2.4 Score=32.19 Aligned_cols=68 Identities=12% Similarity=0.090 Sum_probs=43.3
Q ss_pred eeeCCCc-EEEEec-Cc--EEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEEeCCCceEEeCCC-CeEE
Q 032726 59 VVVRKGA-LYTATN-DG--WVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVICDSKKVRQHTNSQ-ALII 126 (135)
Q Consensus 59 avd~~G~-lYTg~~-dG--~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVaDa~~GLl~V~~~-G~v~ 126 (135)
++.+||+ +++... +| .|+.++..++....+....+....+.+|+++|+ |+.+.....+..++.+ |+.+
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~ 115 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN 115 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce
Confidence 4778885 555554 78 599898755554444433343414789999996 5566666678777754 4443
No 182
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=89.79 E-value=0.51 Score=38.88 Aligned_cols=56 Identities=16% Similarity=0.228 Sum_probs=38.5
Q ss_pred CCcEEEEecCcEEEEEEcCCCceeEEeeecC--CCCCcee------------EC--CCCCEEEEeCCCceEEe
Q 032726 63 KGALYTATNDGWVKYFILHNETLVNWKHIDS--QSLLGLT------------TT--KEGDVVICDSKKVRQHT 119 (135)
Q Consensus 63 ~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~G--RPpLGl~------------fd--~~G~LiVaDa~~GLl~V 119 (135)
+|.+|.++.||+|+.++..+| .+.|....+ -|+++.+ .. .+|+||..|+..|+.+.
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG-~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNG-HIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL 81 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTT-EEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCC-cEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe
Confidence 578999999999999987444 445543332 3446532 33 57888888888887654
No 183
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=89.77 E-value=3 Score=31.76 Aligned_cols=64 Identities=11% Similarity=0.057 Sum_probs=42.6
Q ss_pred CCCceeeeeeC-CC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCC-CEEEEeCCCceE
Q 032726 52 SHPEDVSVVVR-KG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEG-DVVICDSKKVRQ 117 (135)
Q Consensus 52 ~GPEdi~avd~-~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G-~LiVaDa~~GLl 117 (135)
....++ .+.+ +| .+++|..||.|.-|+..++.. ..+..-.+.. ..++|+++| +++++-..-|-+
T Consensus 263 ~~v~~~-~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v-~~~~~s~~~~~~l~s~~~d~~i 330 (416)
T 2pm9_A 263 KGILSL-DWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWC-FKTKFAPEAPDLFACASFDNKI 330 (416)
T ss_dssp SCEEEE-EECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCC-CCEEECTTCTTEEEECCSSSEE
T ss_pred CceeEE-EeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCce-EEEEECCCCCCEEEEEecCCcE
Confidence 344577 5766 55 699999999998887644432 3333334555 899999998 777765555543
No 184
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=89.56 E-value=1.5 Score=34.36 Aligned_cols=60 Identities=18% Similarity=0.245 Sum_probs=38.5
Q ss_pred eeeeeeCCC-cEEEEecCcEEEEEEcCCCcee-EEeeecCCCCCceeECCCCCEEEEeCCCceE
Q 032726 56 DVSVVVRKG-ALYTATNDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKEGDVVICDSKKVRQ 117 (135)
Q Consensus 56 di~avd~~G-~lYTg~~dG~I~ri~~~~~~~~-~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl 117 (135)
++ ++.++| .++||..||.|.-|+..++... .+..-.+.. ..++|+++|+.++.-+.-|-+
T Consensus 128 ~v-~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v-~~~~~~p~~~~l~s~s~d~~v 189 (393)
T 1erj_A 128 SV-CFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDI-YSLDYFPSGDKLVSGSGDRTV 189 (393)
T ss_dssp EE-EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-EEEEECTTSSEEEEEETTSEE
T ss_pred EE-EECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCE-EEEEEcCCCCEEEEecCCCcE
Confidence 67 577887 5899999999988876444332 222122333 678898888766554444433
No 185
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=89.54 E-value=0.93 Score=35.78 Aligned_cols=55 Identities=5% Similarity=0.013 Sum_probs=39.1
Q ss_pred EEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCCceEEeC
Q 032726 66 LYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTN 120 (135)
Q Consensus 66 lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~ 120 (135)
+.+|..||.|.-|+...+.........+.|...++|+++|+.++.-..-|++.+.
T Consensus 332 ~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvr 386 (393)
T 4gq1_A 332 ATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTR 386 (393)
T ss_dssp EEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEE
T ss_pred EEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 4567889999888765444322222344555789999999998888888887665
No 186
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=89.51 E-value=1.9 Score=31.88 Aligned_cols=64 Identities=11% Similarity=0.050 Sum_probs=41.6
Q ss_pred CCceeeeeeCC---C-cEEEEecCcEEEEEEcCC-Cce--eEEeeecCCCCCceeECCCCCEEEEeCCCceEE
Q 032726 53 HPEDVSVVVRK---G-ALYTATNDGWVKYFILHN-ETL--VNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQH 118 (135)
Q Consensus 53 GPEdi~avd~~---G-~lYTg~~dG~I~ri~~~~-~~~--~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~ 118 (135)
.-.++ ++.++ | .+++|..||.|.-|+..+ +.. ..+..-.+.. ..++|+++|+.+++-+.-|-++
T Consensus 41 ~v~~~-~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~~~dg~v~ 111 (368)
T 3mmy_A 41 SIGCL-SFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPV-LDVCWSDDGSKVFTASCDKTAK 111 (368)
T ss_dssp CEEEE-EECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCE-EEEEECTTSSEEEEEETTSEEE
T ss_pred ceEEE-EEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCE-EEEEECcCCCEEEEEcCCCcEE
Confidence 33567 57776 4 699999999998887644 322 2333334545 8999999998666544445333
No 187
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=89.43 E-value=2 Score=33.35 Aligned_cols=57 Identities=18% Similarity=0.186 Sum_probs=40.1
Q ss_pred CCceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEE--eeecCCCCCceeECCCCCEEEEe
Q 032726 53 HPEDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNW--KHIDSQSLLGLTTTKEGDVVICD 111 (135)
Q Consensus 53 GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~--~~t~GRPpLGl~fd~~G~LiVaD 111 (135)
...++ .+.++| .+++|..||.|.-|+..++.. ..+ .+.+.++ ..+.|+++|+++++-
T Consensus 178 ~v~~~-~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 178 TIYSV-DWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRP-VHAVFVSEGKILTTG 238 (402)
T ss_dssp CEEEE-EECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSC-CEEEECSTTEEEEEE
T ss_pred ceEEE-EECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcc-eEEEEcCCCcEEEEe
Confidence 34577 577777 699999999999998754443 222 2334446 889999988877664
No 188
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=89.22 E-value=1.2 Score=35.67 Aligned_cols=67 Identities=12% Similarity=0.012 Sum_probs=41.9
Q ss_pred CceeeeeeCCCc-EE-EEecCcE--EEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCC-C---ceEEeCCC
Q 032726 54 PEDVSVVVRKGA-LY-TATNDGW--VKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSK-K---VRQHTNSQ 122 (135)
Q Consensus 54 PEdi~avd~~G~-lY-Tg~~dG~--I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~-~---GLl~V~~~ 122 (135)
..++ ++.+||+ ++ ++..||. |+.++..++....+....+.. ..++|+++|+.++.-+. . -|+.++.+
T Consensus 225 ~~~~-~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~-~~~~~spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 225 NGAP-AFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNN-TEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp EEEE-EECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCE-EEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred ccCE-EEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcc-cceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence 3467 6888996 55 7777665 998987555544443334444 67889989885444333 2 36666643
No 189
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=88.99 E-value=2.8 Score=33.57 Aligned_cols=71 Identities=11% Similarity=-0.041 Sum_probs=45.5
Q ss_pred CceeeeeeCCCc-EEEEecCc---EEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEE-EeC---CCceEEeCC-CCe
Q 032726 54 PEDVSVVVRKGA-LYTATNDG---WVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVI-CDS---KKVRQHTNS-QAL 124 (135)
Q Consensus 54 PEdi~avd~~G~-lYTg~~dG---~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiV-aDa---~~GLl~V~~-~G~ 124 (135)
..++ ++.++|+ ++++..|+ .|+.++..++....+....+.. ..++|+++|+.++ .-. ..-++.+|. .|.
T Consensus 181 v~~~-~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~-~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~ 258 (415)
T 2hqs_A 181 LMSP-AWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHN-GAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ 258 (415)
T ss_dssp EEEE-EECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCE-EEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred ceee-EEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcc-cCEEEcCCCCEEEEEEecCCCceEEEEECCCCC
Confidence 3456 5788884 77777775 8888887555555554445555 7889999998444 322 233776774 354
Q ss_pred EE
Q 032726 125 II 126 (135)
Q Consensus 125 v~ 126 (135)
..
T Consensus 259 ~~ 260 (415)
T 2hqs_A 259 IR 260 (415)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 190
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=88.95 E-value=2.2 Score=32.33 Aligned_cols=51 Identities=14% Similarity=0.202 Sum_probs=33.9
Q ss_pred CceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEee-----ec---------------CCCCCceeECCCC
Q 032726 54 PEDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKH-----ID---------------SQSLLGLTTTKEG 105 (135)
Q Consensus 54 PEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~-----t~---------------GRPpLGl~fd~~G 105 (135)
.-++ .+.++| .+++|..||.|.-|+..++.. ..+.. .. ..+...++|+++|
T Consensus 294 v~~~-~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 294 VMSL-SFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp EEEE-EECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred EEEE-EECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 3467 577776 699999999999887744432 23330 11 3334789999887
No 191
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=88.87 E-value=1.4 Score=35.04 Aligned_cols=55 Identities=13% Similarity=0.179 Sum_probs=37.8
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCc-eeEEeeecCCCCCceeECCCCCEEEEe
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNET-LVNWKHIDSQSLLGLTTTKEGDVVICD 111 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~-~~~~~~t~GRPpLGl~fd~~G~LiVaD 111 (135)
.++ +++++| .+++|..||.|.-|+..++. ...+..-.+.. ..++|+++++.++.-
T Consensus 342 ~~v-~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v-~~l~~~~~~~~l~sg 398 (410)
T 1vyh_C 342 RGV-LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFV-TSLDFHKTAPYVVTG 398 (410)
T ss_dssp EEE-EECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCE-EEEEECSSSSCEEEE
T ss_pred EEE-EEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcE-EEEEEcCCCCEEEEE
Confidence 467 578777 69999999999888664433 23333333445 789999998866543
No 192
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=88.60 E-value=1.9 Score=32.51 Aligned_cols=69 Identities=9% Similarity=0.041 Sum_probs=40.4
Q ss_pred EeccCCcCCCceeeeeeC-CC-cEEEEecCcEEEEEEcCCCceeE-Ee-------------eecCCCCCceeECC-CCCE
Q 032726 45 KLGEGCVSHPEDVSVVVR-KG-ALYTATNDGWVKYFILHNETLVN-WK-------------HIDSQSLLGLTTTK-EGDV 107 (135)
Q Consensus 45 ~l~~g~~~GPEdi~avd~-~G-~lYTg~~dG~I~ri~~~~~~~~~-~~-------------~t~GRPpLGl~fd~-~G~L 107 (135)
.+..+.-..-.++ ++.+ +| .++||..||.|.-|+..++.... +. ...+.. ..++|.+ ++++
T Consensus 37 ~~~~~h~~~v~~~-~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~ 114 (408)
T 4a11_B 37 DVERIHGGGINTL-DIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSV-ETVQWYPHDTGM 114 (408)
T ss_dssp EECCCCSSCEEEE-EECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCE-EEEEECTTCTTC
T ss_pred eeeeccCCcEEEE-EEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcE-EEEEEccCCCcE
Confidence 3444333344577 5777 76 58999999999888764443211 11 023344 7888987 5655
Q ss_pred EEEeCCCc
Q 032726 108 VICDSKKV 115 (135)
Q Consensus 108 iVaDa~~G 115 (135)
++.-...|
T Consensus 115 l~s~~~d~ 122 (408)
T 4a11_B 115 FTSSSFDK 122 (408)
T ss_dssp EEEEETTS
T ss_pred EEEEeCCC
Confidence 55433334
No 193
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=88.59 E-value=2.1 Score=33.40 Aligned_cols=69 Identities=13% Similarity=0.138 Sum_probs=42.3
Q ss_pred CceeeeeeCCCcEEEEecCcEEEEEEcCCC-ceeEEee---ecCCCCCceeECCCCCEEEEeCCCceEEeCCCC
Q 032726 54 PEDVSVVVRKGALYTATNDGWVKYFILHNE-TLVNWKH---IDSQSLLGLTTTKEGDVVICDSKKVRQHTNSQA 123 (135)
Q Consensus 54 PEdi~avd~~G~lYTg~~dG~I~ri~~~~~-~~~~~~~---t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~~~G 123 (135)
-.++ +++++|.+|....+|.|++...+.+ .|+.... ..+.....+.+++++++|++-..-++++-...|
T Consensus 207 ~~~~-~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~~S~DgG 279 (327)
T 2xbg_A 207 LHNM-GFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCSQDGG 279 (327)
T ss_dssp EEEE-EECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCEEEESSTT
T ss_pred ccee-EECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeEEEeCCCC
Confidence 3466 5778899999999999887643212 2332211 112222567788888999887655566544434
No 194
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=88.59 E-value=1.9 Score=32.93 Aligned_cols=65 Identities=12% Similarity=-0.016 Sum_probs=42.7
Q ss_pred CceeeeeeCCC-cEEEEecCcEEEEEEcCCCc-eeEEeeecCCCCCceeECCCCCEEEEeCCCceEEeC
Q 032726 54 PEDVSVVVRKG-ALYTATNDGWVKYFILHNET-LVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTN 120 (135)
Q Consensus 54 PEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~-~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~ 120 (135)
-.++ ++.++| .+.||..||.|.-|+..+.. .......++.. ..++|+++++++.+-...++...+
T Consensus 216 v~~~-~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v-~~v~~sp~~~~la~~~d~~v~iw~ 282 (343)
T 2xzm_R 216 VNHL-SISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTI-NQIAFNPKLQWVAVGTDQGVKIFN 282 (343)
T ss_dssp EEEE-EECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCE-EEEEECSSSCEEEEEESSCEEEEE
T ss_pred ceEE-EECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcE-EEEEECCCCCEEEEECCCCEEEEE
Confidence 3467 588888 58999999999888752222 21111233444 889999999887766665554444
No 195
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=88.52 E-value=2.3 Score=33.29 Aligned_cols=59 Identities=14% Similarity=0.130 Sum_probs=37.0
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECC-CCCEEEEeCCCc
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTK-EGDVVICDSKKV 115 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~-~G~LiVaDa~~G 115 (135)
.++ .+.++| .+++|..||.|.-|+..++.........+.. ..++|.+ +|+++++-..-|
T Consensus 169 ~~~-~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~~~s~d~ 229 (393)
T 1erj_A 169 YSL-DYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGV-TTVAVSPGDGKYIAAGSLDR 229 (393)
T ss_dssp EEE-EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCE-EEEEECSTTCCEEEEEETTS
T ss_pred EEE-EEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCc-EEEEEECCCCCEEEEEcCCC
Confidence 466 577776 6999999999998877544432222223334 6677776 676665444433
No 196
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=88.33 E-value=1.6 Score=33.94 Aligned_cols=60 Identities=13% Similarity=0.071 Sum_probs=40.4
Q ss_pred CCCceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCC
Q 032726 52 SHPEDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSK 113 (135)
Q Consensus 52 ~GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~ 113 (135)
.+..++ .+.++| .+++|..||.|.-|+..++.. ..+..-.++. ..++|+++|+.++.-+.
T Consensus 285 ~~~~~~-~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v-~~l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 285 FGASSV-DFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRV-STLRVSPDGTAFCSGSW 346 (354)
T ss_dssp SCEEEE-EECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCE-EEEEECTTSSCEEEEET
T ss_pred cceeEE-EEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcE-EEEEECCCCCEEEEEcC
Confidence 455678 688777 588999999998887644432 2232223455 78999999986554333
No 197
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=88.26 E-value=1.3 Score=34.57 Aligned_cols=63 Identities=16% Similarity=0.238 Sum_probs=37.1
Q ss_pred CceeeeeeCCCcEEEEecCcEEEEEEcCCCce---eEEeee--cCCCCCceeECCCCCEEEEeCCCceEE
Q 032726 54 PEDVSVVVRKGALYTATNDGWVKYFILHNETL---VNWKHI--DSQSLLGLTTTKEGDVVICDSKKVRQH 118 (135)
Q Consensus 54 PEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~---~~~~~t--~GRPpLGl~fd~~G~LiVaDa~~GLl~ 118 (135)
=.++ ++.++|.+.++..||.|.-|+..+++. ..+... .+.. ..++|.++|+.++.=..-|-++
T Consensus 97 V~~~-~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V-~~v~~spdg~~l~sgs~dg~v~ 164 (357)
T 4g56_B 97 VTDV-AWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIV-KTLSVFSDGTQAVSGGKDFSVK 164 (357)
T ss_dssp EEEE-EEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCE-EEEEECSSSSEEEEEETTSCEE
T ss_pred EEEE-EEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCE-EEEEECCCCCEEEEEeCCCeEE
Confidence 3467 688999999999999987665433321 111111 2333 7889999998766544444433
No 198
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=88.15 E-value=2.2 Score=31.53 Aligned_cols=59 Identities=10% Similarity=0.005 Sum_probs=38.6
Q ss_pred ceeeeeeCC----C-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECC-CCCEEEEeCCCc
Q 032726 55 EDVSVVVRK----G-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTK-EGDVVICDSKKV 115 (135)
Q Consensus 55 Edi~avd~~----G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~-~G~LiVaDa~~G 115 (135)
-++ ++.++ | .+++|..||.|.-|+..++.. ..+....+.. ..++|++ +++++++-..-|
T Consensus 73 ~~~-~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~l~s~~~dg 138 (366)
T 3k26_A 73 YTC-AWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAI-NELKFHPRDPNLLLSVSKDH 138 (366)
T ss_dssp EEE-EEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCE-EEEEECSSCTTEEEEEETTS
T ss_pred EEE-EeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcE-EEEEECCCCCCEEEEEeCCC
Confidence 456 46666 3 499999999999887644433 3333334444 8899998 787666544444
No 199
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=88.13 E-value=3.3 Score=31.93 Aligned_cols=26 Identities=27% Similarity=0.281 Sum_probs=20.4
Q ss_pred eeeeeeCCC-cEEEEecCcEEEEEEcCC
Q 032726 56 DVSVVVRKG-ALYTATNDGWVKYFILHN 82 (135)
Q Consensus 56 di~avd~~G-~lYTg~~dG~I~ri~~~~ 82 (135)
++ .++++| .+.||..||.|.-|+..+
T Consensus 33 ~v-~~s~~g~~la~g~~dg~v~iw~~~~ 59 (447)
T 3dw8_B 33 TV-EFNHSGELLATGDKGGRVVIFQQEQ 59 (447)
T ss_dssp EE-EECSSSSEEEEEETTSEEEEEEECC
T ss_pred EE-EECCCCCEEEEEcCCCeEEEEEecC
Confidence 56 577887 589999999998887643
No 200
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=88.12 E-value=1.2 Score=33.01 Aligned_cols=55 Identities=13% Similarity=0.021 Sum_probs=35.4
Q ss_pred CCceeeeeeCCCc--EEEEecCcEEEEEEcCCCc--------------------eeEEeeecCCCCCceeECCCCCEEE
Q 032726 53 HPEDVSVVVRKGA--LYTATNDGWVKYFILHNET--------------------LVNWKHIDSQSLLGLTTTKEGDVVI 109 (135)
Q Consensus 53 GPEdi~avd~~G~--lYTg~~dG~I~ri~~~~~~--------------------~~~~~~t~GRPpLGl~fd~~G~LiV 109 (135)
.-.++ .+.++|. +++|..||.|.-|+...+. ...+..-.+.. ..++|+++|+.++
T Consensus 261 ~v~~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~ 337 (357)
T 3i2n_A 261 TVWQV-RHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPI-SSLDWSPDKRGLC 337 (357)
T ss_dssp CEEEE-EEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCE-EEEEECSSSTTEE
T ss_pred CEEEE-EECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCe-eEEEEcCCCCeEE
Confidence 44567 5788875 8999999999777653221 11122223444 7899999987654
No 201
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=88.07 E-value=1.6 Score=34.46 Aligned_cols=72 Identities=10% Similarity=0.095 Sum_probs=46.0
Q ss_pred CCceeeeeeCC-CcEEEEecCcEEEEEEcCCCceeEEee--ecCCCCCc----eeECCCCCEEEEeC-CCceEEeCC-CC
Q 032726 53 HPEDVSVVVRK-GALYTATNDGWVKYFILHNETLVNWKH--IDSQSLLG----LTTTKEGDVVICDS-KKVRQHTNS-QA 123 (135)
Q Consensus 53 GPEdi~avd~~-G~lYTg~~dG~I~ri~~~~~~~~~~~~--t~GRPpLG----l~fd~~G~LiVaDa-~~GLl~V~~-~G 123 (135)
++|.. .+..+ +.+|.+..+++|..+++.+.....-.. ..|+| +. |.+. +|+||+..- .--+.+||+ +|
T Consensus 104 ~~~Gw-glt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~-~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG 180 (243)
T 3mbr_X 104 PGEGW-ALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRP-LDNLNELEWV-NGELLANVWLTSRIARIDPASG 180 (243)
T ss_dssp SSCCC-EEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEE-CCCEEEEEEE-TTEEEEEETTTTEEEEECTTTC
T ss_pred CCCce-EEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcc-cccceeeEEe-CCEEEEEECCCCeEEEEECCCC
Confidence 34666 35544 589999999999999875443322222 23444 33 3333 788998884 456888997 58
Q ss_pred eEEE
Q 032726 124 LIIV 127 (135)
Q Consensus 124 ~v~v 127 (135)
+|+-
T Consensus 181 ~V~~ 184 (243)
T 3mbr_X 181 KVVA 184 (243)
T ss_dssp BEEE
T ss_pred CEEE
Confidence 7753
No 202
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=87.93 E-value=2.4 Score=31.39 Aligned_cols=54 Identities=17% Similarity=0.158 Sum_probs=35.8
Q ss_pred eCCC-cEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECC---CCCEEEEeCCCc
Q 032726 61 VRKG-ALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTK---EGDVVICDSKKV 115 (135)
Q Consensus 61 d~~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~---~G~LiVaDa~~G 115 (135)
.++| .+++|..||.|.-++..++.........+.. ..++|++ +++.+++-...|
T Consensus 177 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~l~~~~~dg 234 (357)
T 3i2n_A 177 NQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGV-CSLEFDRKDISMNKLVATSLEG 234 (357)
T ss_dssp C-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCE-EEEEESCSSSSCCEEEEEESTT
T ss_pred CCCCCEEEEEccCCeEEEEECccCceeeecCCCCce-EEEEcCCCCCCCCEEEEECCCC
Confidence 3555 6899999999999987555443333344555 8999998 777665544444
No 203
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=87.92 E-value=2.1 Score=31.51 Aligned_cols=62 Identities=8% Similarity=0.112 Sum_probs=37.9
Q ss_pred ceeeeeeCC-C-cEEEEecCcEEEEEEcCCCce----e--EEeeecCCCCCceeECCCCCEEEEeCCCceEE
Q 032726 55 EDVSVVVRK-G-ALYTATNDGWVKYFILHNETL----V--NWKHIDSQSLLGLTTTKEGDVVICDSKKVRQH 118 (135)
Q Consensus 55 Edi~avd~~-G-~lYTg~~dG~I~ri~~~~~~~----~--~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~ 118 (135)
-++ ++.++ | .++||..||.|.-|+...... . .+..-.+.. ..+.|+++|++++.-..-|.++
T Consensus 42 ~~v-~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V-~~~~~s~dg~~l~s~~~d~~i~ 111 (340)
T 4aow_A 42 TQI-ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV-SDVVISSDGQFALSGSWDGTLR 111 (340)
T ss_dssp EEE-EECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCE-EEEEECTTSSEEEEEETTSEEE
T ss_pred EEE-EEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCE-EEEEECCCCCEEEEEcccccce
Confidence 367 57765 4 488999999887776533221 1 111112334 7899999998766544444443
No 204
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=87.75 E-value=4.9 Score=34.75 Aligned_cols=86 Identities=5% Similarity=-0.091 Sum_probs=55.7
Q ss_pred eEeccC-CcCCCceeeee--eCCC-cEEEEec------CcEEEEEEcCCCceeEEe---------------------eec
Q 032726 44 IKLGEG-CVSHPEDVSVV--VRKG-ALYTATN------DGWVKYFILHNETLVNWK---------------------HID 92 (135)
Q Consensus 44 e~l~~g-~~~GPEdi~av--d~~G-~lYTg~~------dG~I~ri~~~~~~~~~~~---------------------~t~ 92 (135)
+.|..| ...+|-.+ .+ +++| ..|.++. ++.|+.+..+++.++... .++
T Consensus 242 ~tI~vg~~g~~P~~i-~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~ 320 (462)
T 2ece_A 242 HSLTLGEENRMALEL-RPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVP 320 (462)
T ss_dssp EEEESCTTEEEEEEE-EECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEEC
T ss_pred eEEecCCCCCcccee-EeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCC
Confidence 345554 33577776 45 8887 5898885 678876554344332211 014
Q ss_pred CCCCCceeECCCCC-EEEEeCCCceEEe---CCCCeEEEEEEE
Q 032726 93 SQSLLGLTTTKEGD-VVICDSKKVRQHT---NSQALIIVCVCV 131 (135)
Q Consensus 93 GRPpLGl~fd~~G~-LiVaDa~~GLl~V---~~~G~v~vl~~~ 131 (135)
+.| -+|+++++|+ |||++...+-+++ +..++.+.+..+
T Consensus 321 ~~p-a~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I 362 (462)
T 2ece_A 321 PLV-TDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKV 362 (462)
T ss_dssp CCC-CCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEE
T ss_pred Cce-eEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEE
Confidence 778 9999999995 9999999988876 333555555544
No 205
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=87.69 E-value=2.7 Score=32.72 Aligned_cols=60 Identities=13% Similarity=0.142 Sum_probs=40.5
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEE----eeecCCCCCceeECCCCCEEEEeCCCce
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNW----KHIDSQSLLGLTTTKEGDVVICDSKKVR 116 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~----~~t~GRPpLGl~fd~~G~LiVaDa~~GL 116 (135)
-++ ++.++| .+++|..||.|.-|+...+.. ..+ ..-.++- ..++|+++|+.++.=+.-|-
T Consensus 302 ~~~-~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v-~~l~~s~dg~~l~sgs~D~~ 367 (380)
T 3iz6_a 302 TSV-AFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRI-SCLGLSSDGSALCTGSWDKN 367 (380)
T ss_dssp SEE-EECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCC-CEEEECSSSSEEEEECTTSC
T ss_pred EEE-EECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCce-EEEEECCCCCEEEEeeCCCC
Confidence 467 688777 689999999999887643332 222 1123555 78999999987765444443
No 206
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=87.53 E-value=1.2 Score=35.80 Aligned_cols=71 Identities=11% Similarity=0.102 Sum_probs=46.4
Q ss_pred CCceeeeeeC-CCcEEEEecCcEEEEEEcCCCceeE-Ee-eecCCCCC----ceeECCCCCEEEEeC-CCceEEeCC-CC
Q 032726 53 HPEDVSVVVR-KGALYTATNDGWVKYFILHNETLVN-WK-HIDSQSLL----GLTTTKEGDVVICDS-KKVRQHTNS-QA 123 (135)
Q Consensus 53 GPEdi~avd~-~G~lYTg~~dG~I~ri~~~~~~~~~-~~-~t~GRPpL----Gl~fd~~G~LiVaDa-~~GLl~V~~-~G 123 (135)
++|.. .+.. ++.+|.+..+++|..+++.+..... +. ...|+| + +|++. +|.||+..- .--+.+||+ +|
T Consensus 135 ~~eGw-GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~-v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG 211 (268)
T 3nok_A 135 SGEGW-GLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP-VELINELECA-NGVIYANIWHSSDVLEIDPATG 211 (268)
T ss_dssp SSCCC-CEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEE-CCCEEEEEEE-TTEEEEEETTCSEEEEECTTTC
T ss_pred CCcee-EEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc-cccccccEEe-CCEEEEEECCCCeEEEEeCCCC
Confidence 46655 3443 3489999999999999875444322 21 234555 4 35555 789998884 345788997 58
Q ss_pred eEE
Q 032726 124 LII 126 (135)
Q Consensus 124 ~v~ 126 (135)
+|+
T Consensus 212 ~V~ 214 (268)
T 3nok_A 212 TVV 214 (268)
T ss_dssp BEE
T ss_pred cEE
Confidence 764
No 207
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=87.23 E-value=3.6 Score=34.63 Aligned_cols=34 Identities=9% Similarity=-0.035 Sum_probs=25.3
Q ss_pred CCCceeeeeeCCCc-EEEEec-Cc-----EEEEEEcCCCcee
Q 032726 52 SHPEDVSVVVRKGA-LYTATN-DG-----WVKYFILHNETLV 86 (135)
Q Consensus 52 ~GPEdi~avd~~G~-lYTg~~-dG-----~I~ri~~~~~~~~ 86 (135)
..+-++ ++.+||+ ++++.. || .|+.++..++...
T Consensus 37 ~~~~~~-~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~ 77 (741)
T 2ecf_A 37 PTLMKP-KVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR 77 (741)
T ss_dssp CCCEEE-EECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE
T ss_pred CCCCCc-eEecCCCEEEEEeccCCCCcccEEEEEECCCCcee
Confidence 356688 6899995 888887 88 8999987555443
No 208
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=87.21 E-value=1.8 Score=36.63 Aligned_cols=62 Identities=8% Similarity=0.030 Sum_probs=42.0
Q ss_pred CCCceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCc
Q 032726 52 SHPEDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 52 ~GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
..--++ ++.++| .+.+|..||.|.-|+..++.. ..+....+.. ..++|+++|+.+++=...|
T Consensus 14 ~~v~~i-~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~~~dg 77 (814)
T 3mkq_A 14 DRVKGI-DFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPV-RAGKFIARKNWIIVGSDDF 77 (814)
T ss_dssp SCEEEE-EECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-EEEEEEGGGTEEEEEETTS
T ss_pred CceEEE-EECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcE-EEEEEeCCCCEEEEEeCCC
Confidence 344577 688888 599999999998887644433 3333334544 7899999888655444444
No 209
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=87.08 E-value=3.2 Score=31.86 Aligned_cols=55 Identities=11% Similarity=0.106 Sum_probs=36.2
Q ss_pred CceeeeeeCCC-cEEEEecCcEEEEEEcCCCceeEEeee---cCCCCCceeECCCCCEEEE
Q 032726 54 PEDVSVVVRKG-ALYTATNDGWVKYFILHNETLVNWKHI---DSQSLLGLTTTKEGDVVIC 110 (135)
Q Consensus 54 PEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t---~GRPpLGl~fd~~G~LiVa 110 (135)
=.++ ++.++| .+.+|..||.|.-++...+..+..... .+.. ..++|+++|++++.
T Consensus 64 v~~~-~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v-~~v~~sp~~~~l~s 122 (345)
T 3fm0_A 64 VRKV-AWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEV-KSVAWAPSGNLLAT 122 (345)
T ss_dssp EEEE-EECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCE-EEEEECTTSSEEEE
T ss_pred EEEE-EECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCc-eEEEEeCCCCEEEE
Confidence 3467 588887 599999999987776544433322222 2334 78999999987664
No 210
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=86.84 E-value=2.6 Score=33.44 Aligned_cols=64 Identities=11% Similarity=0.081 Sum_probs=40.5
Q ss_pred CceeeeeeCCCcE--EEEecCcEEEEEEcC--CCce-eEEe--eecCCCCCceeECCCCCEEE-EeCCCceEEe
Q 032726 54 PEDVSVVVRKGAL--YTATNDGWVKYFILH--NETL-VNWK--HIDSQSLLGLTTTKEGDVVI-CDSKKVRQHT 119 (135)
Q Consensus 54 PEdi~avd~~G~l--YTg~~dG~I~ri~~~--~~~~-~~~~--~t~GRPpLGl~fd~~G~LiV-aDa~~GLl~V 119 (135)
.-++ ++.++|.. ++|..||.|.-|+.. ++.. ..+. ...+++ ..++|+++|+.++ ++...-+..+
T Consensus 105 v~~~-~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v-~~~~~sp~~~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 105 IRNL-RLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRP-NAISIAEDDTTVIIADKFGDVYSI 176 (450)
T ss_dssp EEEE-EECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCE-EEEEECTTSSEEEEEETTSEEEEE
T ss_pred eEEE-EEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCc-eEEEEcCCCCEEEEEeCCCcEEEE
Confidence 3467 58888853 789999998777764 3332 3332 234666 8999999997554 4432323333
No 211
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=86.46 E-value=1.6 Score=34.63 Aligned_cols=57 Identities=12% Similarity=0.121 Sum_probs=38.0
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCC
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSK 113 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~ 113 (135)
.++ ++.++| .+.||..||.|.-|+..++.. ..+..-.+.- ..++|+++|++++.-+.
T Consensus 112 ~~~-~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V-~~v~~~~~~~~l~sgs~ 170 (410)
T 1vyh_C 112 TRV-IFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSV-QDISFDHSGKLLASCSA 170 (410)
T ss_dssp EEE-EECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCE-EEEEECTTSSEEEEEET
T ss_pred EEE-EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcE-EEEEEcCCCCEEEEEeC
Confidence 466 577776 589999999999997754443 2232222334 78899998887654333
No 212
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=86.39 E-value=0.81 Score=34.78 Aligned_cols=61 Identities=10% Similarity=-0.031 Sum_probs=35.3
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCc----eeEEeeecCCCCCceeECCCCCEEEEeCCCceE
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNET----LVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQ 117 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~----~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl 117 (135)
.++ ++.++| .+++|..||.|.-|+..++. ...+....+.. ..++|+++|+++++-..-|-+
T Consensus 59 ~~~-~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i 124 (377)
T 3dwl_C 59 TCV-DWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAA-TFVRWSPNEDKFAVGSGARVI 124 (377)
T ss_dssp EEE-EECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCE-EEEECCTTSSCCEEEESSSCE
T ss_pred EEE-EEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCce-EEEEECCCCCEEEEEecCCeE
Confidence 467 577777 69999999999887654433 12222223444 788898888755544334433
No 213
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=86.21 E-value=2.4 Score=33.00 Aligned_cols=53 Identities=9% Similarity=0.049 Sum_probs=35.0
Q ss_pred ceeeeeeCCC--cEEEEecCcEEEEEEcCCCcee-EEeeecCCCCCceeECC-CCCEEEE
Q 032726 55 EDVSVVVRKG--ALYTATNDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTK-EGDVVIC 110 (135)
Q Consensus 55 Edi~avd~~G--~lYTg~~dG~I~ri~~~~~~~~-~~~~t~GRPpLGl~fd~-~G~LiVa 110 (135)
.++ ++.++| .|.||..||.|.-|+...+... .+.+ .+.- .+++|++ +|++++.
T Consensus 273 ~~l-~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H-~~~V-~~vafsP~d~~~l~s 329 (357)
T 4g56_B 273 TGL-AYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSH-RDFV-TGVAWSPLDHSKFTT 329 (357)
T ss_dssp EEE-EECSSSSCCEEEEETTSCEEEECTTSCEEEEECCC-SSCE-EEEEECSSSTTEEEE
T ss_pred EEE-EEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCC-CCCE-EEEEEeCCCCCEEEE
Confidence 467 577766 3789999999988866444322 2222 2445 7899996 7877653
No 214
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=86.11 E-value=3 Score=35.21 Aligned_cols=59 Identities=3% Similarity=-0.045 Sum_probs=38.6
Q ss_pred CCCceeeeeeC----CC-cEEEEec-CcEEEEEEcCCCceeEEeee------------cCCCCCceeECCCC-CEEEEeC
Q 032726 52 SHPEDVSVVVR----KG-ALYTATN-DGWVKYFILHNETLVNWKHI------------DSQSLLGLTTTKEG-DVVICDS 112 (135)
Q Consensus 52 ~GPEdi~avd~----~G-~lYTg~~-dG~I~ri~~~~~~~~~~~~t------------~GRPpLGl~fd~~G-~LiVaDa 112 (135)
.+|.++ ++++ || .+|++.. ++.|.-|+..+.+......+ +.|+ .++.+++++ .+||+..
T Consensus 222 ~~p~~v-a~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v-~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 222 IEARSV-ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRV-AAIIASHEHPEFIVNVK 299 (543)
T ss_dssp SEEEEE-EECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCE-EEEEECSSSSEEEEEET
T ss_pred CCcceE-EeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCce-EEEEECCCCCEEEEEEC
Confidence 589999 7998 88 5899985 89998887644332221122 2377 789888755 3454443
No 215
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=85.97 E-value=3.7 Score=31.27 Aligned_cols=61 Identities=8% Similarity=0.066 Sum_probs=37.5
Q ss_pred eeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeee--c--CCCCCceeECCCCCEEEEeCCCceEE
Q 032726 56 DVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHI--D--SQSLLGLTTTKEGDVVICDSKKVRQH 118 (135)
Q Consensus 56 di~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t--~--GRPpLGl~fd~~G~LiVaDa~~GLl~ 118 (135)
++ .++++ .+.||..||.|.-|+...+..+..... + ..+...++|+++|++++.-+.-|-++
T Consensus 19 ~~-~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~ 83 (330)
T 2hes_X 19 SF-DFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVS 83 (330)
T ss_dssp EE-EEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ee-ccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 45 45565 899999999998887643322221111 1 12336899999998776544444333
No 216
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=85.76 E-value=1.9 Score=32.13 Aligned_cols=72 Identities=13% Similarity=-0.003 Sum_probs=42.3
Q ss_pred CceeeeeeCC---C-cEEEEecCcEEEEEEcCCCc---eeEEee---ecCCCCCceeECCCCCEEEEeCCCc---eEEeC
Q 032726 54 PEDVSVVVRK---G-ALYTATNDGWVKYFILHNET---LVNWKH---IDSQSLLGLTTTKEGDVVICDSKKV---RQHTN 120 (135)
Q Consensus 54 PEdi~avd~~---G-~lYTg~~dG~I~ri~~~~~~---~~~~~~---t~GRPpLGl~fd~~G~LiVaDa~~G---Ll~V~ 120 (135)
-.++ ++.++ | .++++..||.|.-|+...+. ...... ..+.. ..++|+++|+++++-..-| ++.++
T Consensus 209 v~~~-~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v-~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 209 VRDV-AWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL-WRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEEE-EECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCE-EEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred EeEE-EECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcE-EEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 3467 57777 5 69999999998887764432 111111 23333 7889999998655433344 34444
Q ss_pred CCCeEEE
Q 032726 121 SQALIIV 127 (135)
Q Consensus 121 ~~G~v~v 127 (135)
..+....
T Consensus 287 ~~~~~~~ 293 (379)
T 3jrp_A 287 LEGKWEP 293 (379)
T ss_dssp ETTEEEE
T ss_pred CCCcccc
Confidence 3444333
No 217
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=85.58 E-value=4.7 Score=30.61 Aligned_cols=60 Identities=8% Similarity=-0.080 Sum_probs=37.7
Q ss_pred ceeeeeeC--CC-cEEEEecCcEEEEEEcCCCceeEEe-eecCCCCCceeECCCCCEEEEeCCCc
Q 032726 55 EDVSVVVR--KG-ALYTATNDGWVKYFILHNETLVNWK-HIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 55 Edi~avd~--~G-~lYTg~~dG~I~ri~~~~~~~~~~~-~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
.++ .+.+ +| .+.+|..||.|.-|+..++...... .....+...++|+++|+++++=..-|
T Consensus 129 ~~~-~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg 192 (343)
T 3lrv_A 129 IYM-YGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG 192 (343)
T ss_dssp EEE-ECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS
T ss_pred EEE-EcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC
Confidence 456 4667 66 5778999999988877544442221 12222337899999998877633333
No 218
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=85.58 E-value=3.5 Score=30.95 Aligned_cols=58 Identities=9% Similarity=0.117 Sum_probs=37.1
Q ss_pred eeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCc
Q 032726 56 DVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 56 di~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
++ .+.++| .+++|..||.|.-|+..++.. ..+..-.+.- ..++|++++++++.-+.-|
T Consensus 60 ~~-~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~sgs~D~ 119 (304)
T 2ynn_A 60 AG-KFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYI-RSIAVHPTKPYVLSGSDDL 119 (304)
T ss_dssp EE-EEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-EEEEECSSSSEEEEEETTS
T ss_pred EE-EEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcE-EEEEEcCCCCEEEEECCCC
Confidence 55 466666 599999999998887654432 2333223334 6888988887655433333
No 219
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=85.38 E-value=1.1 Score=37.60 Aligned_cols=34 Identities=24% Similarity=0.228 Sum_probs=28.1
Q ss_pred eEeccCCcCCCceeeeee-CCCcEEEEecCcEEEEEEc
Q 032726 44 IKLGEGCVSHPEDVSVVV-RKGALYTATNDGWVKYFIL 80 (135)
Q Consensus 44 e~l~~g~~~GPEdi~avd-~~G~lYTg~~dG~I~ri~~ 80 (135)
+.+..+ ..||.+ ++| ..|.||.+-.|--||||+.
T Consensus 174 R~f~lg--sq~Egc-vvDd~~g~Lyv~eEd~GIw~~da 208 (355)
T 3amr_A 174 RAFKMN--SQTEGM-AADDEYGRLYIAEEDEAIWKFSA 208 (355)
T ss_dssp EEEECS--SCEEEE-EEETTTTEEEEEETTTEEEEEEC
T ss_pred EEecCC--CCcceE-EEcCCCCeEEEecccceEEEEeC
Confidence 455565 589999 788 5689999999999999984
No 220
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=85.26 E-value=3.5 Score=31.44 Aligned_cols=61 Identities=11% Similarity=-0.018 Sum_probs=38.7
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCC--ceeEEee---ecCCCCCceeECCCCCEEEEeCCCceE
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNE--TLVNWKH---IDSQSLLGLTTTKEGDVVICDSKKVRQ 117 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~--~~~~~~~---t~GRPpLGl~fd~~G~LiVaDa~~GLl 117 (135)
.++ ++.++| .+.+|..||.|.-|+..+. ..+.... -.+.. ..++|+++|++++.-+.-|-+
T Consensus 111 ~~v-~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v-~~v~~~p~~~~l~s~s~D~~i 177 (330)
T 2hes_X 111 KGV-AWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDV-KHVIWHPSEALLASSSYDDTV 177 (330)
T ss_dssp EEE-EECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCE-EEEEECSSSSEEEEEETTSCE
T ss_pred EEE-EECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCce-EEEEECCCCCEEEEEcCCCeE
Confidence 467 577887 5899999999988876222 1122221 12333 678899988877655544433
No 221
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=84.90 E-value=6.3 Score=35.42 Aligned_cols=56 Identities=11% Similarity=0.002 Sum_probs=39.4
Q ss_pred CCceeeeeeCCCc-EEEEecCcEEEEEEcCCCceeEEe-eecCCCCCceeECCCCCEEEE
Q 032726 53 HPEDVSVVVRKGA-LYTATNDGWVKYFILHNETLVNWK-HIDSQSLLGLTTTKEGDVVIC 110 (135)
Q Consensus 53 GPEdi~avd~~G~-lYTg~~dG~I~ri~~~~~~~~~~~-~t~GRPpLGl~fd~~G~LiVa 110 (135)
...++ ++.+||+ ++++..|+.|+.++..++...... .-.+.. ..++|+++|+.++.
T Consensus 380 ~~~~~-~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v-~~~~~SpDG~~la~ 437 (1045)
T 1k32_A 380 NVFAM-GVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI-TDFTISDNSRFIAY 437 (1045)
T ss_dssp SEEEE-EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCC-CCEEECTTSCEEEE
T ss_pred ceeee-EECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCc-cceEECCCCCeEEE
Confidence 45677 6888884 889999999999987555544332 223444 78999999985543
No 222
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=84.88 E-value=4.4 Score=31.48 Aligned_cols=63 Identities=8% Similarity=0.111 Sum_probs=41.3
Q ss_pred CCceeeeeeCCCc-EEE--EecCcEEEEEEcCCCceeE---EeeecCCCCCceeECCCCCEEEEeCCCceE
Q 032726 53 HPEDVSVVVRKGA-LYT--ATNDGWVKYFILHNETLVN---WKHIDSQSLLGLTTTKEGDVVICDSKKVRQ 117 (135)
Q Consensus 53 GPEdi~avd~~G~-lYT--g~~dG~I~ri~~~~~~~~~---~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl 117 (135)
...++ .+.++|. +++ |..||.|.-|+..++.... +..-.++. ..++|+++|+.+++-+.-|-+
T Consensus 305 ~v~~~-~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v-~~~~~s~dg~~l~s~~~dg~i 373 (401)
T 4aez_A 305 QVTSL-IWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRV-LYSALSPDGRILSTAASDENL 373 (401)
T ss_dssp CEEEE-EECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCC-CEEEECTTSSEEEEECTTSEE
T ss_pred cEEEE-EECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCE-EEEEECCCCCEEEEEeCCCcE
Confidence 45577 5777774 666 5589999888764443322 22334566 899999999877765555533
No 223
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=84.80 E-value=3.1 Score=31.96 Aligned_cols=62 Identities=19% Similarity=0.138 Sum_probs=39.1
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCceeE---EeeecCCCCCceeECCCCCEEEEeCCCceEE
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETLVN---WKHIDSQSLLGLTTTKEGDVVICDSKKVRQH 118 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~~---~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~ 118 (135)
.++ ++.++| .+.+|..||.|.-++...+.... +..-.+.. ..++|+++|+.++.=+.-|-++
T Consensus 154 ~~~-~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v-~~l~~sp~g~~l~s~s~D~~v~ 219 (345)
T 3fm0_A 154 KHV-VWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTV-WSLAFDPSGQRLASCSDDRTVR 219 (345)
T ss_dssp EEE-EECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE-EEEEECTTSSEEEEEETTSCEE
T ss_pred EEE-EECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCce-EEEEECCCCCEEEEEeCCCeEE
Confidence 456 577777 68999999998777653343222 22222444 7899999998766544444333
No 224
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=84.77 E-value=1.1 Score=36.94 Aligned_cols=59 Identities=2% Similarity=-0.062 Sum_probs=38.7
Q ss_pred ceeeeeeCCCc-EEEEecCc--EEEEEEcCCCceeEEeeecCCCCCcee--------ECCCCCEEEEeCCCc
Q 032726 55 EDVSVVVRKGA-LYTATNDG--WVKYFILHNETLVNWKHIDSQSLLGLT--------TTKEGDVVICDSKKV 115 (135)
Q Consensus 55 Edi~avd~~G~-lYTg~~dG--~I~ri~~~~~~~~~~~~t~GRPpLGl~--------fd~~G~LiVaDa~~G 115 (135)
.++ ++.+||+ ||++..|| +|++++..++.........+.+ -++. |+++|.+++.-...|
T Consensus 198 ~~~-~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 198 SSA-SISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDF-SSYRPTAITWLGYLPDGRLAVVARREG 267 (582)
T ss_dssp EEE-EECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHH-HHHCCSEEEEEEECTTSCEEEEEEETT
T ss_pred ccc-eECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcCh-hhhhhccccceeEcCCCcEEEEEEcCC
Confidence 466 6888994 88888899 9999977544444222222333 5566 999998776544444
No 225
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=84.56 E-value=2.6 Score=35.52 Aligned_cols=65 Identities=12% Similarity=0.028 Sum_probs=43.7
Q ss_pred CceeeeeeCCCc-EEEEecCcEEEEEEcCCC---ceeEEeeecCCCCCceeECCCCCEEEEeCCCceEEeCC
Q 032726 54 PEDVSVVVRKGA-LYTATNDGWVKYFILHNE---TLVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTNS 121 (135)
Q Consensus 54 PEdi~avd~~G~-lYTg~~dG~I~ri~~~~~---~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~~ 121 (135)
..++ ++.+||+ ++++.. +.|+.++..++ ....+....+.. ..++|+++|+.++.-....+..++.
T Consensus 111 v~~~-~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~-~~~~~SPDG~~la~~~~~~i~~~d~ 179 (741)
T 2ecf_A 111 IVDY-QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFA-TDAKLSPKGGFVSFIRGRNLWVIDL 179 (741)
T ss_dssp SCCC-EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCE-EEEEECTTSSEEEEEETTEEEEEET
T ss_pred ccee-EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCccc-ccccCCCCCCEEEEEeCCcEEEEec
Confidence 4678 6889996 666654 99999987555 444444444555 7899999998555444445666664
No 226
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=84.51 E-value=4.5 Score=32.45 Aligned_cols=61 Identities=11% Similarity=0.092 Sum_probs=38.9
Q ss_pred CceeeeeeCCC--cEEEEecCcEEEEEEcCCCce-eEEeeecC--CCCCceeECCC-CCEEEEeCCCc
Q 032726 54 PEDVSVVVRKG--ALYTATNDGWVKYFILHNETL-VNWKHIDS--QSLLGLTTTKE-GDVVICDSKKV 115 (135)
Q Consensus 54 PEdi~avd~~G--~lYTg~~dG~I~ri~~~~~~~-~~~~~t~G--RPpLGl~fd~~-G~LiVaDa~~G 115 (135)
-.++ .+.++| .+++|..||.|.-|+...+.. ..+..-.+ .+...++|+++ |+.+++-...|
T Consensus 163 v~~~-~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 229 (615)
T 1pgu_A 163 INAC-HLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR 229 (615)
T ss_dssp EEEE-EECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC
T ss_pred EEEE-EECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCC
Confidence 4467 577887 599999999999997644332 22221222 13368999998 88666444334
No 227
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=84.44 E-value=2.4 Score=33.14 Aligned_cols=65 Identities=5% Similarity=-0.061 Sum_probs=42.7
Q ss_pred eeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEee---ecCCCCCceeECCCCCEEEEeCCCceEEeCCCC
Q 032726 56 DVSVVVRKGALYTATNDGWVKYFILHNETLVNWKH---IDSQSLLGLTTTKEGDVVICDSKKVRQHTNSQA 123 (135)
Q Consensus 56 di~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~---t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~~~G 123 (135)
++ ++++ +.+|....+|.|+|-+....+|+.... ..|.+ .++.+..++++|++...-++++-+..|
T Consensus 84 ~i-~~~~-~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~g~v~~S~DgG 151 (327)
T 2xbg_A 84 SV-SFQG-NEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSP-RLIKALGNGSAEMITNVGAIYRTKDSG 151 (327)
T ss_dssp EE-EEET-TEEEEEEETTEEEEESSTTSSCEECCCCTTCSSCE-EEEEEEETTEEEEEETTCCEEEESSTT
T ss_pred EE-EecC-CeEEEEECCCeEEEECCCCCCceECccccCCCCCe-EEEEEECCCCEEEEeCCccEEEEcCCC
Confidence 56 4664 789999899999986321224554322 23556 788887788888887655677765545
No 228
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=84.37 E-value=3.2 Score=34.76 Aligned_cols=60 Identities=17% Similarity=0.166 Sum_probs=40.1
Q ss_pred CceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEe-------eecCCCCCceeECCCCCEEEEeCCCc
Q 032726 54 PEDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWK-------HIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 54 PEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~-------~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
-.++ ++.++| .+.||..||.|.-|+..++.. ..+. .-.+.. .+++|+++|+.++.-+.-|
T Consensus 193 V~~v-~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V-~~v~~spdg~~l~s~s~D~ 261 (611)
T 1nr0_A 193 VHSV-RYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSV-FGLTWSPDGTKIASASADK 261 (611)
T ss_dssp EEEE-EECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCE-EEEEECTTSSEEEEEETTS
T ss_pred eEEE-EECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCE-EEEEECCCCCEEEEEeCCC
Confidence 4577 688888 478999999998887644432 2221 123455 8999999998766444444
No 229
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=84.23 E-value=4.6 Score=33.79 Aligned_cols=72 Identities=7% Similarity=-0.106 Sum_probs=46.1
Q ss_pred CCceeeeeeCCCc-EEEEecC---------cEEEEEEcCCCceeEEeeecC---CCCCceeECCCCCEEEEeCCCceEEe
Q 032726 53 HPEDVSVVVRKGA-LYTATND---------GWVKYFILHNETLVNWKHIDS---QSLLGLTTTKEGDVVICDSKKVRQHT 119 (135)
Q Consensus 53 GPEdi~avd~~G~-lYTg~~d---------G~I~ri~~~~~~~~~~~~t~G---RPpLGl~fd~~G~LiVaDa~~GLl~V 119 (135)
+..++ ++.+||+ +.++..+ +.|+.++..++....+....+ +. -.++|+++|+.++.-+...+..+
T Consensus 62 ~v~~~-~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~-~~~~~SPdG~~la~~~~~~i~~~ 139 (723)
T 1xfd_A 62 RAIRY-EISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKL-QYAGWGPKGQQLIFIFENNIYYC 139 (723)
T ss_dssp TCSEE-EECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCC-SBCCBCSSTTCEEEEETTEEEEE
T ss_pred ccceE-EECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccc-cccEECCCCCEEEEEECCeEEEE
Confidence 47789 6999996 6666654 777788765554433333222 24 67889999976554444667777
Q ss_pred CCC-CeEE
Q 032726 120 NSQ-ALII 126 (135)
Q Consensus 120 ~~~-G~v~ 126 (135)
+.+ |...
T Consensus 140 ~~~~g~~~ 147 (723)
T 1xfd_A 140 AHVGKQAI 147 (723)
T ss_dssp SSSSSCCE
T ss_pred ECCCCceE
Confidence 754 4443
No 230
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=84.00 E-value=3.4 Score=32.28 Aligned_cols=53 Identities=9% Similarity=-0.041 Sum_probs=34.2
Q ss_pred ceeeeeeCCC--cEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEE
Q 032726 55 EDVSVVVRKG--ALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVI 109 (135)
Q Consensus 55 Edi~avd~~G--~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiV 109 (135)
.++ ++.++| .+.||..||.|.-|+...+....+..-.+.- ..++|+++|+ |++
T Consensus 261 ~~v-~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V-~~v~~sp~~~~lla 316 (344)
T 4gqb_B 261 TGL-VFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFV-RDATWSPLNHSLLT 316 (344)
T ss_dssp EEE-EECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCE-EEEEECSSSTTEEE
T ss_pred EEE-EEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCE-EEEEEeCCCCeEEE
Confidence 467 577777 3789999999988865433332222122444 7899998875 553
No 231
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=83.63 E-value=3.8 Score=31.17 Aligned_cols=62 Identities=8% Similarity=0.155 Sum_probs=38.7
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCC---C--ceeEEeeecCCCCCceeECCC-CCEEEEeCCCceEE
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHN---E--TLVNWKHIDSQSLLGLTTTKE-GDVVICDSKKVRQH 118 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~---~--~~~~~~~t~GRPpLGl~fd~~-G~LiVaDa~~GLl~ 118 (135)
-++ ++.++| .+++|..||.|.-|+... + ....+..-.+.. ..++|+++ ++++++-..-|-++
T Consensus 71 ~~~-~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~l~s~~~dg~v~ 139 (416)
T 2pm9_A 71 NDL-DWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSV-KTVKFNAKQDNVLASGGNNGEIF 139 (416)
T ss_dssp EEE-EECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCC-CEEEECSSSTTBEEEECSSSCEE
T ss_pred EEE-EECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccce-EEEEEcCCCCCEEEEEcCCCeEE
Confidence 366 577777 689999999998886643 1 122222233444 78999987 67665544444333
No 232
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=83.61 E-value=5.1 Score=33.90 Aligned_cols=56 Identities=16% Similarity=0.220 Sum_probs=37.4
Q ss_pred CceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEe
Q 032726 54 PEDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICD 111 (135)
Q Consensus 54 PEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaD 111 (135)
-.++ ++.++| .+.||..||.|.-|+..++.. ..+..-.+.- ..++|+++|+.++.-
T Consensus 433 v~~v-~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v-~~~~~s~~~~~l~s~ 490 (694)
T 3dm0_A 433 VEDV-VLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDV-LSVAFSLDNRQIVSA 490 (694)
T ss_dssp EEEE-EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-EEEEECTTSSCEEEE
T ss_pred EEEE-EECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCE-EEEEEeCCCCEEEEE
Confidence 3567 578887 589999999998887644432 2232223444 788999888755443
No 233
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=83.38 E-value=6.6 Score=32.57 Aligned_cols=71 Identities=6% Similarity=-0.032 Sum_probs=43.7
Q ss_pred ceeeeeeCCCc-EEEEecC--------cEEEEEEcC-CC---ceeEEeee-cCCCCCceeECCCCCEEEEeCCCc---eE
Q 032726 55 EDVSVVVRKGA-LYTATND--------GWVKYFILH-NE---TLVNWKHI-DSQSLLGLTTTKEGDVVICDSKKV---RQ 117 (135)
Q Consensus 55 Edi~avd~~G~-lYTg~~d--------G~I~ri~~~-~~---~~~~~~~t-~GRPpLGl~fd~~G~LiVaDa~~G---Ll 117 (135)
.++ .+.+||+ |+....+ ..|+.++.. ++ ....+..- .+.. ..++|+++|++++.-...| |+
T Consensus 191 ~~~-~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~-~~~~~spdg~l~~~~~~~~~~~l~ 268 (662)
T 3azo_A 191 TGP-RLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAI-AQAEWAPDGSLIVATDRTGWWNLH 268 (662)
T ss_dssp CCC-EECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCE-EEEEECTTSCEEEEECTTSSCEEE
T ss_pred cCc-eECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceE-cceEECCCCeEEEEECCCCCeEEE
Confidence 345 5778985 6666544 478888775 34 23333222 3455 7889999999766544334 88
Q ss_pred EeCC-CCeEEE
Q 032726 118 HTNS-QALIIV 127 (135)
Q Consensus 118 ~V~~-~G~v~v 127 (135)
.++. +|..+.
T Consensus 269 ~~~~~~~~~~~ 279 (662)
T 3azo_A 269 RVDPATGAATQ 279 (662)
T ss_dssp EECTTTCCEEE
T ss_pred EEECCCCceee
Confidence 8876 455543
No 234
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=83.32 E-value=4 Score=30.63 Aligned_cols=60 Identities=20% Similarity=0.172 Sum_probs=38.0
Q ss_pred CceeeeeeCCCc--EEEEecCcEEEEEEcCCCc--eeEE---------------eeecCCCCCceeECCCCCEEEEeCCC
Q 032726 54 PEDVSVVVRKGA--LYTATNDGWVKYFILHNET--LVNW---------------KHIDSQSLLGLTTTKEGDVVICDSKK 114 (135)
Q Consensus 54 PEdi~avd~~G~--lYTg~~dG~I~ri~~~~~~--~~~~---------------~~t~GRPpLGl~fd~~G~LiVaDa~~ 114 (135)
-.++ .+.++|. +++|..||.|.-|+...+. ...+ ....+.. ..++|+++|+.+++-..-
T Consensus 189 v~~~-~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d 266 (408)
T 4a11_B 189 ILAV-SWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKV-NGLCFTSDGLHLLTVGTD 266 (408)
T ss_dssp EEEE-EECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCE-EEEEECTTSSEEEEEETT
T ss_pred EEEE-EECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCce-eEEEEcCCCCEEEEecCC
Confidence 3467 5778875 8899999999888764332 1111 1223444 788999998865544444
Q ss_pred c
Q 032726 115 V 115 (135)
Q Consensus 115 G 115 (135)
|
T Consensus 267 g 267 (408)
T 4a11_B 267 N 267 (408)
T ss_dssp S
T ss_pred C
Confidence 4
No 235
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=83.17 E-value=4.6 Score=30.90 Aligned_cols=58 Identities=12% Similarity=-0.000 Sum_probs=36.2
Q ss_pred eeCCCcEEEEecCcEEEEEEcCCC----------ceeEEeeecCCCCCceeECCCCC---EEEEeCCCceEE
Q 032726 60 VVRKGALYTATNDGWVKYFILHNE----------TLVNWKHIDSQSLLGLTTTKEGD---VVICDSKKVRQH 118 (135)
Q Consensus 60 vd~~G~lYTg~~dG~I~ri~~~~~----------~~~~~~~t~GRPpLGl~fd~~G~---LiVaDa~~GLl~ 118 (135)
+..+..++++..||.|.-|+..+. ....+....++- ..++|.++|+ -++|-...|.+.
T Consensus 343 ~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~~g~l~a~g~~g~~~ 413 (420)
T 3vl1_A 343 FAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAV-SQFCYVSDDESNGEVLEVGKNNFCA 413 (420)
T ss_dssp EETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCC-CEEEEECCSSSSCEEEEEETTTEEE
T ss_pred eCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcce-EEEEEccCCCCcceEEEEcCCceEE
Confidence 433447899999999987765332 112233344555 7899988887 445555556554
No 236
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=83.17 E-value=4.3 Score=36.10 Aligned_cols=66 Identities=8% Similarity=-0.009 Sum_probs=46.2
Q ss_pred CceeeeeeCCC-cEEEEecCcEEEEEEcCCCce--------eEEee-ec---CCCCCceeECCCCCEEEEeCCCceEEeC
Q 032726 54 PEDVSVVVRKG-ALYTATNDGWVKYFILHNETL--------VNWKH-ID---SQSLLGLTTTKEGDVVICDSKKVRQHTN 120 (135)
Q Consensus 54 PEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~--------~~~~~-t~---GRPpLGl~fd~~G~LiVaDa~~GLl~V~ 120 (135)
=.++ ++.+|| .|++|+.||.|.-|+..++.. ..+.. .. +.- ..++|.++| |+.+-..+.+...+
T Consensus 132 v~sv-afSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V-~sVawSPdg-Laass~D~tVrlWd 208 (588)
T 2j04_A 132 YHCF-EWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWV-THIVWYEDV-LVAALSNNSVFSMT 208 (588)
T ss_dssp EEEE-EECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCE-EEEEEETTE-EEEEETTCCEEEEC
T ss_pred EEEE-EEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccE-EEEEEcCCc-EEEEeCCCeEEEEE
Confidence 3478 688888 699999999998887644421 22210 01 344 888999999 87777777777777
Q ss_pred CC
Q 032726 121 SQ 122 (135)
Q Consensus 121 ~~ 122 (135)
.+
T Consensus 209 ~~ 210 (588)
T 2j04_A 209 VS 210 (588)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 237
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=82.85 E-value=3 Score=31.71 Aligned_cols=56 Identities=11% Similarity=0.131 Sum_probs=38.5
Q ss_pred CCceeeeeeCCCc-EEEEecCcEEEEEEcCCCcee--EEee-ecCCCCCceeECCCCCEEEE
Q 032726 53 HPEDVSVVVRKGA-LYTATNDGWVKYFILHNETLV--NWKH-IDSQSLLGLTTTKEGDVVIC 110 (135)
Q Consensus 53 GPEdi~avd~~G~-lYTg~~dG~I~ri~~~~~~~~--~~~~-t~GRPpLGl~fd~~G~LiVa 110 (135)
...++ ++.++|. +.+|..||.|.-|+..++... .+.. -.+.. ..++|+++|+.+++
T Consensus 172 ~i~~~-~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v-~~l~fs~~g~~l~s 231 (343)
T 3lrv_A 172 EYSSG-VLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKI-KEVKFADNGYWMVV 231 (343)
T ss_dssp CCCEE-EECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCE-EEEEECTTSSEEEE
T ss_pred ceEEE-EECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCE-EEEEEeCCCCEEEE
Confidence 35677 6888885 677899999988877554432 3332 23444 89999999986654
No 238
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=82.78 E-value=2.3 Score=33.85 Aligned_cols=60 Identities=13% Similarity=0.083 Sum_probs=38.6
Q ss_pred CCCceeeeeeCCC-cEEEEecCcEEEEEEcCCCcee-----EEeeecCCCCCceeECCC---CCEEE-EeCC
Q 032726 52 SHPEDVSVVVRKG-ALYTATNDGWVKYFILHNETLV-----NWKHIDSQSLLGLTTTKE---GDVVI-CDSK 113 (135)
Q Consensus 52 ~GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~-----~~~~t~GRPpLGl~fd~~---G~LiV-aDa~ 113 (135)
..+.++ +++++| .+++|..||.|+.++..++... .+..-.+.. ..++|+++ |++++ ++..
T Consensus 150 ~~v~~~-~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v-~~~~~sp~~~~~~~l~s~~~d 219 (450)
T 2vdu_B 150 KRPNAI-SIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSML-TDVHLIKDSDGHQFIITSDRD 219 (450)
T ss_dssp SCEEEE-EECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCE-EEEEEEECTTSCEEEEEEETT
T ss_pred CCceEE-EEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCce-EEEEEcCCCCCCcEEEEEcCC
Confidence 345688 688887 6999999999999976443321 222223444 77888887 75444 4433
No 239
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=82.76 E-value=6.2 Score=34.10 Aligned_cols=58 Identities=17% Similarity=0.222 Sum_probs=41.5
Q ss_pred CCCceeeeeeCCC-cEEEEec-CcEEEEEEcCCC---ceeEEeeecC---------------CCCCceeECCCCC-EEEE
Q 032726 52 SHPEDVSVVVRKG-ALYTATN-DGWVKYFILHNE---TLVNWKHIDS---------------QSLLGLTTTKEGD-VVIC 110 (135)
Q Consensus 52 ~GPEdi~avd~~G-~lYTg~~-dG~I~ri~~~~~---~~~~~~~t~G---------------RPpLGl~fd~~G~-LiVa 110 (135)
..|.+| .+++|| .+|.++. ++.|..++..+. +......++| .| =+++++++|+ |||+
T Consensus 321 ~~pa~I-~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggP-r~~~lSpDGk~LyVa 398 (462)
T 2ece_A 321 PLVTDI-DISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAP-QMLEISRDGRRVYVT 398 (462)
T ss_dssp CCCCCE-EECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCC-CCEEECTTSSEEEEE
T ss_pred CceeEE-EECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCC-CEEEEcCCCCEEEEE
Confidence 469999 799888 5999988 567766654222 2233345664 37 8999999995 8888
Q ss_pred e
Q 032726 111 D 111 (135)
Q Consensus 111 D 111 (135)
.
T Consensus 399 N 399 (462)
T 2ece_A 399 N 399 (462)
T ss_dssp C
T ss_pred c
Confidence 8
No 240
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=82.75 E-value=7.2 Score=30.77 Aligned_cols=60 Identities=10% Similarity=0.144 Sum_probs=37.2
Q ss_pred eeeeeeC-CC-cEEEEecCcEEEEEEcCCCceeEEeeecC--CCCCceeECCCCCEEEEeCCCce
Q 032726 56 DVSVVVR-KG-ALYTATNDGWVKYFILHNETLVNWKHIDS--QSLLGLTTTKEGDVVICDSKKVR 116 (135)
Q Consensus 56 di~avd~-~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t~G--RPpLGl~fd~~G~LiVaDa~~GL 116 (135)
++ .+.+ +| .++||..||.|.-|+...+....+..... .+...++|+++|+++++-...|-
T Consensus 169 ~l-~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~ 232 (435)
T 4e54_B 169 GL-KFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGN 232 (435)
T ss_dssp EE-EECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSB
T ss_pred EE-EEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCc
Confidence 66 5764 55 69999999999888764333333322211 12257888888887765444443
No 241
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=82.65 E-value=4.1 Score=32.68 Aligned_cols=58 Identities=12% Similarity=0.113 Sum_probs=37.9
Q ss_pred CCCceeeeeeCCC-cEEEEecCcEEEEEEcCCCcee-EEee-ecCCCCCceeECC----------CCCEEEEe
Q 032726 52 SHPEDVSVVVRKG-ALYTATNDGWVKYFILHNETLV-NWKH-IDSQSLLGLTTTK----------EGDVVICD 111 (135)
Q Consensus 52 ~GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~-~~~~-t~GRPpLGl~fd~----------~G~LiVaD 111 (135)
....++ ++.++| .+.+|..||.|.-|+..++... .+.. -.+.. ..++|++ +|+++++-
T Consensus 489 ~~v~~~-~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v-~~~~~sp~~~~~~~~~~~~~~l~~~ 559 (615)
T 1pgu_A 489 AKPSYI-SISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKI-NAISWKPAEKGANEEEIEEDLVATG 559 (615)
T ss_dssp SCEEEE-EECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCE-EEEEECCCC------CCSCCEEEEE
T ss_pred CceEEE-EECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCce-eEEEEcCccccccccccCCCEEEEE
Confidence 344567 587777 6889999999998877444322 1211 23334 7889988 88765543
No 242
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=82.63 E-value=4.4 Score=34.96 Aligned_cols=61 Identities=3% Similarity=-0.103 Sum_probs=43.3
Q ss_pred eeCCCcEEEEe-cCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEEeCCCceEEeCC
Q 032726 60 VVRKGALYTAT-NDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVICDSKKVRQHTNS 121 (135)
Q Consensus 60 vd~~G~lYTg~-~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVaDa~~GLl~V~~ 121 (135)
.|.++.+|... .+|.|..|+..++.......++.+| -|++|+++|+ +||++..-.+..+|.
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p-~~v~~SpDGr~lyv~~~dg~V~viD~ 225 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAV-HISRLSASGRYLFVIGRDGKVNMIDL 225 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCE-EEEEECTTSCEEEEEETTSEEEEEET
T ss_pred cCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCc-cceEECCCCCEEEEEcCCCeEEEEEC
Confidence 35555666655 4799999987544443334567777 8999999996 788886666777776
No 243
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=82.61 E-value=4.5 Score=31.77 Aligned_cols=57 Identities=18% Similarity=0.137 Sum_probs=39.0
Q ss_pred eeeeeeCCCcEEEEecCcEEEEEEcCCCce-eEEe-----eecCCCCCceeECCCCCEEEEeCCCc
Q 032726 56 DVSVVVRKGALYTATNDGWVKYFILHNETL-VNWK-----HIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 56 di~avd~~G~lYTg~~dG~I~ri~~~~~~~-~~~~-----~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
++ .++ +..+++|..||.|.-|+..++.. ..+. ...+.. ..++|+++|+++++-..-|
T Consensus 367 ~~-~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 367 CL-QFN-KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVV-WRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp EE-EEC-SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEE-EEEEECSSEEEEEEECSSS
T ss_pred EE-EEC-CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceE-EEEEecCCEEEEEEcccCC
Confidence 45 354 35799999999999998755543 3331 234555 7899999998776655555
No 244
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=82.41 E-value=1.1 Score=39.93 Aligned_cols=64 Identities=11% Similarity=0.013 Sum_probs=44.4
Q ss_pred eEeccCCcCCCceeeeeeCCCc-EEEE-ecCcEEEEEEcCCCc------------eeEEeeecCCCCCceeECCCCCEEE
Q 032726 44 IKLGEGCVSHPEDVSVVVRKGA-LYTA-TNDGWVKYFILHNET------------LVNWKHIDSQSLLGLTTTKEGDVVI 109 (135)
Q Consensus 44 e~l~~g~~~GPEdi~avd~~G~-lYTg-~~dG~I~ri~~~~~~------------~~~~~~t~GRPpLGl~fd~~G~LiV 109 (135)
..|..| ..|+.+ .+++||+ +|.. ..+.+|.-|+..... ...-..+|-+| ++++||++|++|+
T Consensus 271 ~~Ipvg--~~PhGv-~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP-~h~aF~~dG~aY~ 346 (595)
T 1fwx_A 271 RYIPIA--NNPHGC-NMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP-LHTAFDGRGNAYT 346 (595)
T ss_dssp EEEEEE--SSCCCE-EECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCE-EEEEECTTSEEEE
T ss_pred EEEecC--CCceEE-EEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCc-ceEEECCCCeEEE
Confidence 356665 589999 7999995 5554 457888888763210 11123677788 9999999998887
Q ss_pred Ee
Q 032726 110 CD 111 (135)
Q Consensus 110 aD 111 (135)
.-
T Consensus 347 t~ 348 (595)
T 1fwx_A 347 SL 348 (595)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 245
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=82.09 E-value=4.7 Score=33.77 Aligned_cols=56 Identities=9% Similarity=0.125 Sum_probs=37.4
Q ss_pred CCceeeeeeCCC-cEEEEecCcEEEEEEcCCCceeEE--eeecCCCCCceeECCCCCEEEE
Q 032726 53 HPEDVSVVVRKG-ALYTATNDGWVKYFILHNETLVNW--KHIDSQSLLGLTTTKEGDVVIC 110 (135)
Q Consensus 53 GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~~~--~~t~GRPpLGl~fd~~G~LiVa 110 (135)
.+.++ ++.+|| .+.+|..||.|.-|+..++..... ..-.++. ..++|+++|++++.
T Consensus 450 ~v~~v-a~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v-~~v~fspdg~~las 508 (611)
T 1nr0_A 450 NSSCV-ALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEI-TSVAFSNNGAFLVA 508 (611)
T ss_dssp CEEEE-EECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCE-EEEEECTTSSEEEE
T ss_pred CceEE-EEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCce-EEEEECCCCCEEEE
Confidence 34577 688888 589999999998776533332211 1123445 78999999986654
No 246
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=82.05 E-value=4.1 Score=36.54 Aligned_cols=59 Identities=10% Similarity=0.105 Sum_probs=39.8
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCc
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
-++ ++.++| .+.+|..||.|.-|+..++.. ..+..-.+.. ..++|+++|+++++-...|
T Consensus 619 ~~~-~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v-~~~~~s~~~~~l~s~~~d~ 679 (1249)
T 3sfz_A 619 YHA-CFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEV-LCCAFSSDDSYIATCSADK 679 (1249)
T ss_dssp EEE-EECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE-EEEEECTTSSEEEEEETTS
T ss_pred EEE-EECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCE-EEEEEecCCCEEEEEeCCC
Confidence 356 577887 689999999998887654432 2333334444 7899999998666544444
No 247
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=81.80 E-value=5.6 Score=29.67 Aligned_cols=54 Identities=19% Similarity=0.201 Sum_probs=32.4
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCce---eEEeeecCCCCCceeECC--CCCEEEE
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETL---VNWKHIDSQSLLGLTTTK--EGDVVIC 110 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~---~~~~~t~GRPpLGl~fd~--~G~LiVa 110 (135)
.++ +++++| .+.||..||.|.-|+..++.. ..+..-.+.- ..++|.+ +|++++.
T Consensus 13 ~~~-~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V-~~v~~s~~~~g~~l~s 72 (297)
T 2pm7_B 13 HDA-VMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPV-WRVDWAHPKFGTILAS 72 (297)
T ss_dssp EEE-EECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCE-EEEEECCGGGCSEEEE
T ss_pred EEE-EECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCe-EEEEecCCCcCCEEEE
Confidence 367 688888 689999999998886633221 2222112333 5777753 3665543
No 248
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=80.93 E-value=8.9 Score=32.06 Aligned_cols=66 Identities=11% Similarity=0.023 Sum_probs=44.2
Q ss_pred CCCceeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCCceEEeC
Q 032726 52 SHPEDVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTN 120 (135)
Q Consensus 52 ~GPEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~ 120 (135)
.++.++ ++.+|+.+..+ .||.|+.++..++....+....++. ..++|+++|+.++.-...-|..++
T Consensus 82 ~~v~~~-~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~-~~~~~SpdG~~la~~~~~~i~v~~ 147 (706)
T 2z3z_A 82 FPSFRT-LDAGRGLVVLF-TQGGLVGFDMLARKVTYLFDTNEET-ASLDFSPVGDRVAYVRNHNLYIAR 147 (706)
T ss_dssp CCCEEE-EETTTTEEEEE-ETTEEEEEETTTTEEEEEECCTTCC-TTCEECTTSSEEEEEETTEEEEEE
T ss_pred cCceeE-EECCCCeEEEE-ECCEEEEEECCCCceEEccCCcccc-cCCcCCCCCCEEEEEECCeEEEEe
Confidence 467788 68888655544 6799999987555544444445666 899999999865543444455555
No 249
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=80.73 E-value=5.2 Score=33.83 Aligned_cols=65 Identities=14% Similarity=0.031 Sum_probs=44.8
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCCceEEeCC
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTNS 121 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~~ 121 (135)
.++ ++.++| .+.+|..||.|.-|+..++.........+.. ..++|++++.++++-...++...|-
T Consensus 565 ~~v-~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v-~~~~~sp~~~~l~~~~~~~i~iwd~ 630 (694)
T 3dm0_A 565 STV-AVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVI-HALCFSPNRYWLCAATEHGIKIWDL 630 (694)
T ss_dssp EEE-EECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCE-EEEEECSSSSEEEEEETTEEEEEET
T ss_pred EEE-EEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcE-EEEEEcCCCcEEEEEcCCCEEEEEC
Confidence 467 578887 5889999999988876444322111222333 7889999999888877777766664
No 250
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=80.67 E-value=15 Score=27.66 Aligned_cols=53 Identities=6% Similarity=-0.100 Sum_probs=31.3
Q ss_pred eeeeeeCCC-cEEEEecCcEEEEEEcCCCceeEEeee-cCCCC-CceeECCCCCEEE
Q 032726 56 DVSVVVRKG-ALYTATNDGWVKYFILHNETLVNWKHI-DSQSL-LGLTTTKEGDVVI 109 (135)
Q Consensus 56 di~avd~~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t-~GRPp-LGl~fd~~G~LiV 109 (135)
+. ++.+|| .|+.+..++.|++++..++........ .+... ....++++|++++
T Consensus 85 ~~-~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~ 140 (388)
T 3pe7_A 85 GG-FLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLV 140 (388)
T ss_dssp SC-EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEE
T ss_pred ce-EEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeec
Confidence 45 578888 589999999999998755543332221 12110 1122467777665
No 251
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=80.58 E-value=3.8 Score=32.47 Aligned_cols=64 Identities=9% Similarity=-0.037 Sum_probs=40.9
Q ss_pred CCceeeeeeCCCc--EEEEecCcEEEEEEcCCCc------------eeEE-eee--cCCCCCceeECCCCC-EEEEeCCC
Q 032726 53 HPEDVSVVVRKGA--LYTATNDGWVKYFILHNET------------LVNW-KHI--DSQSLLGLTTTKEGD-VVICDSKK 114 (135)
Q Consensus 53 GPEdi~avd~~G~--lYTg~~dG~I~ri~~~~~~------------~~~~-~~t--~GRPpLGl~fd~~G~-LiVaDa~~ 114 (135)
.--++ .+.++|. +.++..||.|.-|+..... .+.. .+. .+.+ ..++|+++++ ++++-+.-
T Consensus 323 ~v~~i-~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v-~~~~~~p~~~~~l~s~s~d 400 (430)
T 2xyi_A 323 EIFQV-QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI-SDFSWNPNEPWIICSVSED 400 (430)
T ss_dssp CEEEE-EECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCE-EEEEECSSSTTEEEEEETT
T ss_pred CEEEE-EECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCc-eEEEECCCCCCEEEEEECC
Confidence 34467 5777773 8899999999888763311 1111 221 2345 8999999998 77766665
Q ss_pred ceEE
Q 032726 115 VRQH 118 (135)
Q Consensus 115 GLl~ 118 (135)
|.++
T Consensus 401 g~i~ 404 (430)
T 2xyi_A 401 NIMQ 404 (430)
T ss_dssp SEEE
T ss_pred CCEE
Confidence 5443
No 252
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=80.52 E-value=7.1 Score=30.30 Aligned_cols=54 Identities=6% Similarity=0.008 Sum_probs=36.0
Q ss_pred CCcEEEEecCcEEEEEEcCCCceeEEeee-cCCCCCceeECCCCCEEEEeCCCce
Q 032726 63 KGALYTATNDGWVKYFILHNETLVNWKHI-DSQSLLGLTTTKEGDVVICDSKKVR 116 (135)
Q Consensus 63 ~G~lYTg~~dG~I~ri~~~~~~~~~~~~t-~GRPpLGl~fd~~G~LiVaDa~~GL 116 (135)
.+.+.++..||.|.-|+..++........ ...+...++|+++|+++++-..-|-
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~ 157 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGL 157 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCe
Confidence 46799999999999998755554333222 2333378999999886655444443
No 253
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=80.41 E-value=5.8 Score=29.94 Aligned_cols=70 Identities=9% Similarity=0.074 Sum_probs=42.6
Q ss_pred ceeeeeeCCC-----cEEEEecCcEEEEEEcCCC---c--eeEEeeecCCCCCceeECCCCCEEEEeCCCc---eEEeCC
Q 032726 55 EDVSVVVRKG-----ALYTATNDGWVKYFILHNE---T--LVNWKHIDSQSLLGLTTTKEGDVVICDSKKV---RQHTNS 121 (135)
Q Consensus 55 Edi~avd~~G-----~lYTg~~dG~I~ri~~~~~---~--~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G---Ll~V~~ 121 (135)
.++ ++.++| .+.+|..||.|.-|+..+. . .+.+....+.- ..++|+++|++++.-..-| ++..+.
T Consensus 216 ~~v-~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v-~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 216 RDV-AWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVV-WHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEE-ECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCE-EEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EEE-EecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcE-EEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 356 466654 5999999999988865331 1 12222234555 8999999998766433333 445555
Q ss_pred CCeEE
Q 032726 122 QALII 126 (135)
Q Consensus 122 ~G~v~ 126 (135)
+|...
T Consensus 294 ~g~~~ 298 (316)
T 3bg1_A 294 DGQWV 298 (316)
T ss_dssp TSCEE
T ss_pred CCcEE
Confidence 66543
No 254
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=80.31 E-value=7.3 Score=30.21 Aligned_cols=52 Identities=15% Similarity=0.046 Sum_probs=35.4
Q ss_pred CC-cEEEEecCcEEEEEEcCCCce-eEEee--ecCCCCCceeECCCCCEEEEeCCCc
Q 032726 63 KG-ALYTATNDGWVKYFILHNETL-VNWKH--IDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 63 ~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~--t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
+| .+++|..||.|.-|+..++.. ..+.. -.+.. ..++|+++|+++++-...|
T Consensus 181 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v-~~~~~s~~~~~l~s~~~dg 236 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAV-SSICIDEECCVLILGTTRG 236 (437)
T ss_dssp SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCE-EEEEECTTSCEEEEEETTS
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCce-EEEEECCCCCEEEEEcCCC
Confidence 44 799999999999998744433 22322 23555 8999999888766555545
No 255
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=80.27 E-value=14 Score=31.16 Aligned_cols=62 Identities=13% Similarity=-0.020 Sum_probs=39.7
Q ss_pred CCCceeeeeeC--CC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCc
Q 032726 52 SHPEDVSVVVR--KG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 52 ~GPEdi~avd~--~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
.+...+ .+.+ +| .+++|..||.|.-|+..++.. ..+..-.+.. ..++|+++|+++++-..-|
T Consensus 185 ~~v~~~-~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg 250 (814)
T 3mkq_A 185 RGVNYV-DYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV-SFAVFHPTLPIIISGSEDG 250 (814)
T ss_dssp TCCCEE-EECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCE-EEEEECSSSSEEEEEETTS
T ss_pred CCEEEE-EEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCE-EEEEEcCCCCEEEEEeCCC
Confidence 344556 4655 55 699999999999997644432 2232223334 6888998888666555444
No 256
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=79.83 E-value=5.7 Score=29.42 Aligned_cols=59 Identities=15% Similarity=0.089 Sum_probs=36.0
Q ss_pred ceeeeeeCC--C-cEEEEecCcEEEEEEcCCCceeE---EeeecCCCCCceeECCC--CCEEEEeCCCc
Q 032726 55 EDVSVVVRK--G-ALYTATNDGWVKYFILHNETLVN---WKHIDSQSLLGLTTTKE--GDVVICDSKKV 115 (135)
Q Consensus 55 Edi~avd~~--G-~lYTg~~dG~I~ri~~~~~~~~~---~~~t~GRPpLGl~fd~~--G~LiVaDa~~G 115 (135)
-++ .+.++ | .+++|..||.|.-|+..++.... +....+.. ..++|+++ |+++++-..-|
T Consensus 59 ~~~-~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~l~~~~~d~ 125 (379)
T 3jrp_A 59 WRV-DWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASV-NSVQWAPHEYGPLLLVASSDG 125 (379)
T ss_dssp EEE-EECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE-EEEEECCGGGCSEEEEEETTS
T ss_pred EEE-EeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcce-EEEEeCCCCCCCEEEEecCCC
Confidence 356 45433 4 79999999999888765554222 22223334 78889887 77655444444
No 257
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=79.68 E-value=4.7 Score=31.31 Aligned_cols=60 Identities=18% Similarity=0.177 Sum_probs=39.3
Q ss_pred CCceeeeeeC-CC-cEEEEecCcEEEEEEcCC---Cc----eeEEeeecCCCCCceeECCCCCEEEEeCCCc
Q 032726 53 HPEDVSVVVR-KG-ALYTATNDGWVKYFILHN---ET----LVNWKHIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 53 GPEdi~avd~-~G-~lYTg~~dG~I~ri~~~~---~~----~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
.--++ ++.+ +| .+.||..||.|.-|+... +. ...+. -.+.. ..++|+++++++++-..-|
T Consensus 65 ~V~~~-~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~-h~~~v-~~~~~~~~~~~l~s~s~dg 133 (437)
T 3gre_A 65 SITSS-AVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYD-CSSTV-TQITMIPNFDAFAVSSKDG 133 (437)
T ss_dssp CEEEE-EEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEE-CSSCE-EEEEECTTSSEEEEEETTS
T ss_pred ceEEE-EECCCCCCEEEEecCCceEEEeECcccccCcccceeeecc-CCCCE-EEEEEeCCCCEEEEEeCCC
Confidence 34577 5777 77 699999999998886532 21 11122 23444 8999999988666544444
No 258
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=79.51 E-value=14 Score=29.12 Aligned_cols=63 Identities=11% Similarity=0.021 Sum_probs=39.8
Q ss_pred cCCCceeeeeeC-CC-cEEEEecCcEEEEEEcCCCc----eeEEeeecCCCCCceeECCCCC-EEEEeCCCc
Q 032726 51 VSHPEDVSVVVR-KG-ALYTATNDGWVKYFILHNET----LVNWKHIDSQSLLGLTTTKEGD-VVICDSKKV 115 (135)
Q Consensus 51 ~~GPEdi~avd~-~G-~lYTg~~dG~I~ri~~~~~~----~~~~~~t~GRPpLGl~fd~~G~-LiVaDa~~G 115 (135)
-...+++ .+.+ ++ .++++..||.|.-|+...+. ...+..-.+.+ ..++|+++++ ++++-..-|
T Consensus 231 ~~~v~~v-~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v-~~i~~~p~~~~~l~tg~~dg 300 (430)
T 2xyi_A 231 TAVVEDV-AWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV-NCLSFNPYSEFILATGSADK 300 (430)
T ss_dssp SSCEEEE-EECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE-EEEEECSSCTTEEEEEETTS
T ss_pred CCCEeee-EEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe-EEEEeCCCCCCEEEEEeCCC
Confidence 3456788 5876 44 56799999999998775431 12232223444 7899998875 565444334
No 259
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=79.12 E-value=17 Score=27.04 Aligned_cols=52 Identities=6% Similarity=-0.163 Sum_probs=33.5
Q ss_pred cEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeC----------CCceEEeCCCCeEEEEE
Q 032726 73 GWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDS----------KKVRQHTNSQALIIVCV 129 (135)
Q Consensus 73 G~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa----------~~GLl~V~~~G~v~vl~ 129 (135)
..|+.++..++.. +.+.. . .. -.+.|+++| ++++-. ..-|+.++ +|.++.|.
T Consensus 152 ~~l~~~d~~~~~~~~~l~~-~-~~-~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~ 214 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEK-P-RF-SSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGKEEKMF 214 (347)
T ss_dssp EEEEEEETTTTEEEEEEEE-E-TT-CEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTEEEEEE
T ss_pred ceEEEEECCCCeEEeeecC-C-Cc-ccccCCCCe-EEEEEecccccccccccccEEEeC-CCceEEec
Confidence 5788887755554 44444 3 45 788999999 655432 23577888 77766553
No 260
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=78.95 E-value=5.2 Score=29.87 Aligned_cols=71 Identities=11% Similarity=0.002 Sum_probs=42.5
Q ss_pred ceeeeeeCCC----cEEEEecCcEEEEEEcCCCc--e--eEE--eeecCCCCCceeECCCCCEEEEeCCCc---eEEeCC
Q 032726 55 EDVSVVVRKG----ALYTATNDGWVKYFILHNET--L--VNW--KHIDSQSLLGLTTTKEGDVVICDSKKV---RQHTNS 121 (135)
Q Consensus 55 Edi~avd~~G----~lYTg~~dG~I~ri~~~~~~--~--~~~--~~t~GRPpLGl~fd~~G~LiVaDa~~G---Ll~V~~ 121 (135)
.++ ++.++| .+.+|..||.|.-|+..++. + +.+ ....+.. ..++|+++|++++.-..-| ++.++.
T Consensus 208 ~~v-~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v-~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 208 RDV-AWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL-WRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEE-EECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCE-EEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EEE-EECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcE-EEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 466 577764 58899999999887653321 1 111 1112334 6889999998776544444 344445
Q ss_pred CCeEEE
Q 032726 122 QALIIV 127 (135)
Q Consensus 122 ~G~v~v 127 (135)
+|.-+.
T Consensus 286 ~g~w~~ 291 (297)
T 2pm7_B 286 EGKWEP 291 (297)
T ss_dssp TSCEEE
T ss_pred CCcEEe
Confidence 565443
No 261
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=78.36 E-value=6.4 Score=30.78 Aligned_cols=56 Identities=13% Similarity=0.087 Sum_probs=34.9
Q ss_pred CCceeeeeeCCCcEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeEC--CCCCEEEE
Q 032726 53 HPEDVSVVVRKGALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTT--KEGDVVIC 110 (135)
Q Consensus 53 GPEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd--~~G~LiVa 110 (135)
.-.++ .+.+++.+++|..||.|.-|+..++.. ..+..-.+.- ..++|. ++++++++
T Consensus 164 ~V~~l-~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v-~~l~~~~~~~~~~l~s 222 (464)
T 3v7d_B 164 GVWAL-KYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTV-RCLDIVEYKNIKYIVT 222 (464)
T ss_dssp CEEEE-EECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-EEEEEEESSSCEEEEE
T ss_pred CEEEE-EEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCcc-EEEEEecCCCCCEEEE
Confidence 44566 577788999999999999887754432 2232222333 566666 45554443
No 262
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=77.61 E-value=5.6 Score=34.20 Aligned_cols=53 Identities=21% Similarity=0.300 Sum_probs=34.7
Q ss_pred eCCCcEEEEecCcEEEEEEcCCCceeEEee-ecCCCCCc--eeECCCCCEEEE--eCCCc
Q 032726 61 VRKGALYTATNDGWVKYFILHNETLVNWKH-IDSQSLLG--LTTTKEGDVVIC--DSKKV 115 (135)
Q Consensus 61 d~~G~lYTg~~dG~I~ri~~~~~~~~~~~~-t~GRPpLG--l~fd~~G~LiVa--Da~~G 115 (135)
..+|.+|.|+.||+++-++..+++ +.|.. +++.. .+ +.+..+|++||+ +.+-|
T Consensus 495 tagglvf~g~~dg~l~A~D~~tG~-~lW~~~~~~g~-~a~P~~y~~~G~qYv~~~~G~gg 552 (582)
T 1flg_A 495 TAGNLVFTGTGDGYFKAFDAKSGK-ELWKFQTGSGI-VSPPITWEQDGEQYLGVTVGYGG 552 (582)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCC-EEEEEECSSCC-CSCCEEEEETTEEEEEEEECCCS
T ss_pred eCCCEEEEECCCCcEEEEECCCCC-EEEEecCCCCc-ccCceEEEECCEEEEEEEccCCC
Confidence 357899999999999999875444 34433 32222 23 667678888775 44445
No 263
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.21 E-value=16 Score=27.38 Aligned_cols=74 Identities=11% Similarity=0.062 Sum_probs=44.0
Q ss_pred CceeeeeeCCCc-E-EEEecCc--EEEEEEcCCCceeEEeeecCCCCCceeECCCCCEE-EEeCCCceEEeCCC-CeEEE
Q 032726 54 PEDVSVVVRKGA-L-YTATNDG--WVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVV-ICDSKKVRQHTNSQ-ALIIV 127 (135)
Q Consensus 54 PEdi~avd~~G~-l-YTg~~dG--~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~Li-VaDa~~GLl~V~~~-G~v~v 127 (135)
..++ ++.+||+ + |+...+| .|+.++..++....+....++..-+..|.++|+.+ .+.....|+.++.+ |....
T Consensus 38 ~~~~-~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 38 FYQK-CFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp TTSC-CBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eecC-cCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE
Confidence 4567 5788885 3 4444434 78888764444444333333331237889999754 55555568888864 55544
Q ss_pred E
Q 032726 128 C 128 (135)
Q Consensus 128 l 128 (135)
+
T Consensus 117 ~ 117 (396)
T 3c5m_A 117 I 117 (396)
T ss_dssp E
T ss_pred E
Confidence 4
No 264
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=77.13 E-value=4.6 Score=35.04 Aligned_cols=62 Identities=13% Similarity=0.026 Sum_probs=40.0
Q ss_pred CceeeeeeCC---C-cEEEEecCcEEEEEEcCCCce----eE--EeeecCCCCCceeECCCCCEEEEeCCCceE
Q 032726 54 PEDVSVVVRK---G-ALYTATNDGWVKYFILHNETL----VN--WKHIDSQSLLGLTTTKEGDVVICDSKKVRQ 117 (135)
Q Consensus 54 PEdi~avd~~---G-~lYTg~~dG~I~ri~~~~~~~----~~--~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl 117 (135)
--++ ++.++ | .+++|..||.|.-|+..++.. .. .....+.. ..++|+++|+.+++-+.-|-+
T Consensus 207 V~~l-~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v-~~l~~spdg~~l~s~s~Dg~I 278 (753)
T 3jro_A 207 VRDV-AWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL-WRASWSLSGNVLALSGGDNKV 278 (753)
T ss_dssp EEEE-EECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCC-CCEEECTTTCCEEEECSSSCE
T ss_pred EEEE-EeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCce-EEEEEcCCCCEEEEEcCCCEE
Confidence 3466 57776 5 699999999998887644321 11 11233444 799999999876665555533
No 265
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=77.07 E-value=4.1 Score=32.26 Aligned_cols=54 Identities=15% Similarity=0.090 Sum_probs=33.7
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEE
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVIC 110 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVa 110 (135)
-++ .++++| .+++|..||.|.-++........+..-.+.- ..++|+++++ +++.
T Consensus 213 ~~~-~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v-~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 213 CSL-DVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKV-THVALNPCCDWFLAT 268 (435)
T ss_dssp CCE-EEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCE-EEEEECTTCSSEEEE
T ss_pred EEE-EECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceE-EeeeecCCCceEEEE
Confidence 356 577777 5889999999988876332222222222333 6788887765 5543
No 266
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=76.51 E-value=5.9 Score=35.54 Aligned_cols=59 Identities=14% Similarity=0.174 Sum_probs=41.5
Q ss_pred CCceeeeeeCCCcEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCC
Q 032726 53 HPEDVSVVVRKGALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSK 113 (135)
Q Consensus 53 GPEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~ 113 (135)
...++ .+.+++.++++..||.|.-|+..++.. ..+..-.++. ..++|+++|+.++.-+.
T Consensus 1046 ~v~~~-~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v-~~~~~s~d~~~l~s~s~ 1105 (1249)
T 3sfz_A 1046 TVKDF-RLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTV-LSCAISSDATKFSSTSA 1105 (1249)
T ss_dssp CEEEE-EECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCC-CCEEECSSSSSCEEECC
T ss_pred cEEEE-EEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcE-EEEEECCCCCEEEEEcC
Confidence 34456 567889999999999999998755543 3344445555 89999998876554433
No 267
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=76.36 E-value=15 Score=26.44 Aligned_cols=28 Identities=18% Similarity=0.304 Sum_probs=21.4
Q ss_pred eeeeeeCCC-cEEEEecCcEEEEEEcCCCc
Q 032726 56 DVSVVVRKG-ALYTATNDGWVKYFILHNET 84 (135)
Q Consensus 56 di~avd~~G-~lYTg~~dG~I~ri~~~~~~ 84 (135)
++ ++.++| .+.+|..||.|.-|+..++.
T Consensus 72 ~v-~~~~~~~~l~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 72 SV-AWIKEGNYLAVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp EE-EECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred EE-EECCCCCEEEEEECCCcEEEeecCCce
Confidence 56 577787 58999999999888764443
No 268
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=75.93 E-value=2.4 Score=33.73 Aligned_cols=62 Identities=6% Similarity=0.105 Sum_probs=34.3
Q ss_pred CCCcEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECC----CCCEEEEeCCCceEEeCC-CCeE
Q 032726 62 RKGALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTK----EGDVVICDSKKVRQHTNS-QALI 125 (135)
Q Consensus 62 ~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~----~G~LiVaDa~~GLl~V~~-~G~v 125 (135)
.++.+|++..||.|+-++..+++ ..|....+.. -...++. ++.+|++.....+..+|. +|++
T Consensus 129 ~~~~v~~~~~dg~v~a~d~~tG~-~~W~~~~~~~-~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 129 STSLLYLGRTEYTITMYDTKTRE-LRWNATYFDY-AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp ----EEEEEEEEEEECCCSSSSS-CCCEEEEEEE-CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred cCCEEEEEecCCEEEEEECCCCC-EEEeEecccc-cCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 46689999999999998765553 1121110001 1223333 267888777777777875 5654
No 269
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=75.77 E-value=9.4 Score=33.09 Aligned_cols=59 Identities=20% Similarity=0.195 Sum_probs=36.2
Q ss_pred ceeeeeeCCC-cEEEEecCcEEEEEEcCCCceeEEeee---cCCCCCceeECCC--CCEEEEeCCCc
Q 032726 55 EDVSVVVRKG-ALYTATNDGWVKYFILHNETLVNWKHI---DSQSLLGLTTTKE--GDVVICDSKKV 115 (135)
Q Consensus 55 Edi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t---~GRPpLGl~fd~~--G~LiVaDa~~G 115 (135)
-++ +++++| .++||..||.|.-|+..++..+..... .+.- ..++|.++ |++++.-+.-|
T Consensus 13 ~~l-~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V-~~l~~s~~~~~~~l~s~s~Dg 77 (753)
T 3jro_A 13 HDA-VLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPV-WRVDWAHPKFGTILASCSYDG 77 (753)
T ss_dssp EEE-CCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCE-EEEEECCTTSCSEEEEEETTS
T ss_pred EEE-EECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCce-EEEEecCCCCCCEEEEEeCCC
Confidence 356 577777 599999999998776533332222221 2333 68888765 77665544444
No 270
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=75.52 E-value=18 Score=28.12 Aligned_cols=62 Identities=11% Similarity=0.032 Sum_probs=36.3
Q ss_pred eeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCCceEEeC
Q 032726 56 DVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTN 120 (135)
Q Consensus 56 di~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~ 120 (135)
++ .++ +..+++|..||.|.-|+..+.... +....+.+.--+.|..+|+++++-....+...|
T Consensus 357 ~~-~~~-~~~l~s~s~dg~v~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd 418 (464)
T 3v7d_B 357 LL-RLS-DKFLVSAAADGSIRGWDANDYSRK-FSYHHTNLSAITTFYVSDNILVSGSENQFNIYN 418 (464)
T ss_dssp EE-EEC-SSEEEEEETTSEEEEEETTTCCEE-EEEECTTCCCEEEEEECSSEEEEEETTEEEEEE
T ss_pred EE-EEc-CCEEEEEeCCCcEEEEECCCCcee-eeecCCCCccEEEEEeCCCEEEEecCCeEEEEE
Confidence 45 354 458999999999998877444322 222223331455777777776655443333334
No 271
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=75.39 E-value=2.9 Score=35.05 Aligned_cols=55 Identities=5% Similarity=0.096 Sum_probs=35.7
Q ss_pred CceeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEee-ecC---CCCCceeECCCCCEEEE
Q 032726 54 PEDVSVVVRKGALYTATNDGWVKYFILHNETLVNWKH-IDS---QSLLGLTTTKEGDVVIC 110 (135)
Q Consensus 54 PEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~-t~G---RPpLGl~fd~~G~LiVa 110 (135)
+.++ ++.+||++.+...||.|+.++..++....... ... +. -.++|+++|+.++.
T Consensus 19 ~~~~-~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v-~~~~~SpDg~~l~~ 77 (723)
T 1xfd_A 19 DPEA-KWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRA-IRYEISPDREYALF 77 (723)
T ss_dssp CCCC-CBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTC-SEEEECTTSSEEEE
T ss_pred cccc-EEcCCCcEEEEeCCCCEEEEECCCCcEEEEecccccccccc-ceEEECCCCCEEEE
Confidence 6677 58888875555789999999764444332221 111 24 67899999985443
No 272
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=75.33 E-value=7.4 Score=32.28 Aligned_cols=54 Identities=9% Similarity=0.171 Sum_probs=35.5
Q ss_pred CceeeeeeCCC-cEEEEecC----------cEEEEEEcCC------CceeEEe-eecCCCCCceeECCCCCEEE
Q 032726 54 PEDVSVVVRKG-ALYTATND----------GWVKYFILHN------ETLVNWK-HIDSQSLLGLTTTKEGDVVI 109 (135)
Q Consensus 54 PEdi~avd~~G-~lYTg~~d----------G~I~ri~~~~------~~~~~~~-~t~GRPpLGl~fd~~G~LiV 109 (135)
..++ ++.+|| .|+++..| ..|++++..+ +..+.+. .-.+.. ..++|++||+.++
T Consensus 132 ~~~~-~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~SpDG~~la 203 (662)
T 3azo_A 132 WADP-VLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFV-TGPRLSPDGRQAV 203 (662)
T ss_dssp EEEE-EEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEE-CCCEECTTSSEEE
T ss_pred ccCc-EECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcc-cCceECCCCCEEE
Confidence 3466 588898 47777776 6899998754 3444333 223444 6788999997543
No 273
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=73.03 E-value=18 Score=31.54 Aligned_cols=63 Identities=11% Similarity=0.112 Sum_probs=40.3
Q ss_pred eeeeee-CCC--cEEEEecCcEEEEEEcC-CCc---eeEEeeecCCCCC-ceeECCCC-CEEEEeCCCceEEeC
Q 032726 56 DVSVVV-RKG--ALYTATNDGWVKYFILH-NET---LVNWKHIDSQSLL-GLTTTKEG-DVVICDSKKVRQHTN 120 (135)
Q Consensus 56 di~avd-~~G--~lYTg~~dG~I~ri~~~-~~~---~~~~~~t~GRPpL-Gl~fd~~G-~LiVaDa~~GLl~V~ 120 (135)
+| ++| .+| -+|.|+.||+|.|+... ++. .+.+.--.+.|.+ .|.+|++. .|||. ...++.+|.
T Consensus 391 ~I-aVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~-s~~~V~~vp 462 (528)
T 3ol2_B 391 AV-AVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVM-TQSTLLKVP 462 (528)
T ss_dssp EE-EEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEE-CSSCEEEEE
T ss_pred EE-EEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEE-eCCEEEEEE
Confidence 45 466 344 47889999999998652 211 2444333466743 89998665 56664 666787775
No 274
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=72.57 E-value=7.7 Score=33.14 Aligned_cols=50 Identities=24% Similarity=0.399 Sum_probs=32.3
Q ss_pred eeCCCcEEEEecCcEEEEEEcCCCceeEEe-eecCCCCCc--eeECCCCCEEEEe
Q 032726 60 VVRKGALYTATNDGWVKYFILHNETLVNWK-HIDSQSLLG--LTTTKEGDVVICD 111 (135)
Q Consensus 60 vd~~G~lYTg~~dG~I~ri~~~~~~~~~~~-~t~GRPpLG--l~fd~~G~LiVaD 111 (135)
...+|.+|.|+.||+|+-++..+++. .|. .+++.. .+ +.+..+|++||+.
T Consensus 472 ~t~gg~v~~g~~dg~l~a~D~~tG~~-lw~~~~~~~~-~~~p~~~~~~G~~yv~~ 524 (571)
T 2ad6_A 472 YTKGGLVWYATLDGYLKALDNKDGKE-LWNFKMPSGG-IGSPMTYSFKGKQYIGS 524 (571)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCE-EEEEECSSCC-CSCCEEEEETTEEEEEE
T ss_pred EECCCEEEEEcCCCeEEEEECCCCCE-EEEEeCCCCc-EeeeEEEEECCEEEEEE
Confidence 34578999999999999998755543 333 344332 33 3333678887753
No 275
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=71.81 E-value=12 Score=31.33 Aligned_cols=55 Identities=7% Similarity=0.029 Sum_probs=38.5
Q ss_pred eee-CCCcEEEE-ecCcEEEEEEcCC-----CceeEEeeec--CCCCCceeECCCCCEEEEeCCC
Q 032726 59 VVV-RKGALYTA-TNDGWVKYFILHN-----ETLVNWKHID--SQSLLGLTTTKEGDVVICDSKK 114 (135)
Q Consensus 59 avd-~~G~lYTg-~~dG~I~ri~~~~-----~~~~~~~~t~--GRPpLGl~fd~~G~LiVaDa~~ 114 (135)
+.| .+|.+|.+ .....|.+|++.. +..+.+++-. -.| =+|.+|.+|+|||.....
T Consensus 281 ~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~p-d~~~i~~~g~Lwv~sn~l 344 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFG-TDISVDSKGGLWFMSNGF 344 (381)
T ss_dssp EECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSE-EEEEECTTSCEEEEECSC
T ss_pred EEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCcccc-CeEEECCCCeEEEEECcc
Confidence 466 78998877 5678999998743 1224443322 237 799999999999977664
No 276
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=70.59 E-value=26 Score=26.14 Aligned_cols=70 Identities=9% Similarity=0.049 Sum_probs=39.5
Q ss_pred eeeeeC-CCcEEEEe-----------------cCcEEEEEEcCCCceeEEeeecC-----------CCCCceeECCCCCE
Q 032726 57 VSVVVR-KGALYTAT-----------------NDGWVKYFILHNETLVNWKHIDS-----------QSLLGLTTTKEGDV 107 (135)
Q Consensus 57 i~avd~-~G~lYTg~-----------------~dG~I~ri~~~~~~~~~~~~t~G-----------RPpLGl~fd~~G~L 107 (135)
. .+.+ ||+++... .++.|+.++..++..+.+....+ .. ...+|+++|+.
T Consensus 287 ~-~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~ 364 (396)
T 3c5m_A 287 H-LMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITH-PHPSFTPNDDG 364 (396)
T ss_dssp E-EEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTC-CCCEECTTSSE
T ss_pred C-CccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCC-CCceEccCCCe
Confidence 5 5677 88755542 34789999875555444433222 13 46789999974
Q ss_pred -EEEeCCC---ceEEeCC-CCeEEEE
Q 032726 108 -VICDSKK---VRQHTNS-QALIIVC 128 (135)
Q Consensus 108 -iVaDa~~---GLl~V~~-~G~v~vl 128 (135)
+++.... -|+.++. .|..+++
T Consensus 365 l~~~s~~~~~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 365 VLFTSDFEGVPAIYIADVPESYKHLE 390 (396)
T ss_dssp EEEEECTTSSCEEEEEECCTTCC---
T ss_pred EEEEecCCCCceEEEEEEcccccccc
Confidence 4443322 3778885 4555554
No 277
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=70.36 E-value=13 Score=31.65 Aligned_cols=61 Identities=15% Similarity=0.256 Sum_probs=36.5
Q ss_pred CCcEEEEecCcEEEEEEcCCCceeEEe-eecCCCCCceeEC-----CCCCEEEEeC------CCceEEeCC-CCeE
Q 032726 63 KGALYTATNDGWVKYFILHNETLVNWK-HIDSQSLLGLTTT-----KEGDVVICDS------KKVRQHTNS-QALI 125 (135)
Q Consensus 63 ~G~lYTg~~dG~I~ri~~~~~~~~~~~-~t~GRPpLGl~fd-----~~G~LiVaDa------~~GLl~V~~-~G~v 125 (135)
+|.+|.++.||+++-++..+++ +.|. .+.+.+ .+.... .+|.+||... .-.+..+|. +|++
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~-~~W~~~~~~~~-~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 188 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGK-INWEVEVCDPK-VGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGEL 188 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCC-EEEEEECCCGG-GTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCC-EEEEecCCCCC-ccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcE
Confidence 6799999999999999875554 3343 233321 221111 2456776654 234777775 4665
No 278
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=70.33 E-value=14 Score=29.99 Aligned_cols=67 Identities=6% Similarity=-0.054 Sum_probs=41.0
Q ss_pred CCceeeeeeCC-C-cEEEEecCcEEEEEEcCCCceeEEee--ecCCCCCceeECCCCCEEE-EeCCCceEEeCCC
Q 032726 53 HPEDVSVVVRK-G-ALYTATNDGWVKYFILHNETLVNWKH--IDSQSLLGLTTTKEGDVVI-CDSKKVRQHTNSQ 122 (135)
Q Consensus 53 GPEdi~avd~~-G-~lYTg~~dG~I~ri~~~~~~~~~~~~--t~GRPpLGl~fd~~G~LiV-aDa~~GLl~V~~~ 122 (135)
...++ ++.++ + .+.++..||.|.-|+..++.. .... ...+. ..++|+++|+.++ +....-+...+.+
T Consensus 151 ~V~~v-~~~p~~~~~las~s~Dg~v~iwD~~~~~~-~~~~~~~~~~v-~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 151 MVIDM-KWNPTVPSMVAVCLADGSIAVLQVTETVK-VCATLPSTVAV-TSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp SEEEE-EECSSCTTEEEEEETTSCEEEEEESSSEE-EEEEECGGGCE-EEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred ceEEE-EECCCCCCEEEEEECCCeEEEEEcCCCcc-eeeccCCCCce-eEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 35577 57765 5 477899999998887644422 1112 13455 8899998886444 4444334444444
No 279
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=69.73 E-value=10 Score=33.08 Aligned_cols=49 Identities=12% Similarity=0.256 Sum_probs=33.9
Q ss_pred eeCCCcEEEEecCcEEEEEEcCCCceeEEee-ec----CCCCCceeECCCCCEEEEeC
Q 032726 60 VVRKGALYTATNDGWVKYFILHNETLVNWKH-ID----SQSLLGLTTTKEGDVVICDS 112 (135)
Q Consensus 60 vd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~-t~----GRPpLGl~fd~~G~LiVaDa 112 (135)
...+|.+|+|+.||+++-++..+++ +.|.. ++ +.| +.|..+|+.||+-+
T Consensus 483 ~tagglvf~gt~dg~l~a~D~~tG~-~lw~~~~~~~~~~~p---~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 483 STAGNLVFEGSADGRVIAYAADTGE-KLWEQPAASGVMAAP---VTYSVDGEQYVTFM 536 (689)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCC-EEEEEECSSCCCSCC---EEEEETTEEEEEEE
T ss_pred eECCCEEEEECCCCcEEEEECCCCc-cceeeeCCCCcccCc---eEEEECCEEEEEEE
Confidence 4567899999999999999875544 33433 22 233 66667898888743
No 280
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=69.47 E-value=16 Score=32.41 Aligned_cols=54 Identities=13% Similarity=0.191 Sum_probs=34.7
Q ss_pred EEEEecCcEEEEEEcCCCc----e---eEEe-eecCCCCCceeECCCC-CEEEEeCCCceEEeC
Q 032726 66 LYTATNDGWVKYFILHNET----L---VNWK-HIDSQSLLGLTTTKEG-DVVICDSKKVRQHTN 120 (135)
Q Consensus 66 lYTg~~dG~I~ri~~~~~~----~---~~~~-~t~GRPpLGl~fd~~G-~LiVaDa~~GLl~V~ 120 (135)
+|.|+.+|+|.|+....+. . +.+. ...++|...|.+|++. .||| -...++.+|.
T Consensus 383 lFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV-~s~~~V~qVP 445 (590)
T 3nvq_A 383 LYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYV-SSQWEVSQVP 445 (590)
T ss_dssp EEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEE-ECSSEEEEEE
T ss_pred EEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEE-EecceEEEcc
Confidence 7889999999998653221 1 1121 1257786789998664 5665 4556677765
No 281
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=68.90 E-value=15 Score=31.92 Aligned_cols=55 Identities=11% Similarity=0.122 Sum_probs=34.7
Q ss_pred cEEEEecCcEEEEEEcCCCc-----eeEEeee-cCCCCC-ceeECCCCC-EEEEeCCCceEEeC
Q 032726 65 ALYTATNDGWVKYFILHNET-----LVNWKHI-DSQSLL-GLTTTKEGD-VVICDSKKVRQHTN 120 (135)
Q Consensus 65 ~lYTg~~dG~I~ri~~~~~~-----~~~~~~t-~GRPpL-Gl~fd~~G~-LiVaDa~~GLl~V~ 120 (135)
-+|.|+.||+|.|+....+. .+.+.-. .|.|.. .|.+|++++ ||| -...++.+|-
T Consensus 415 V~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv-~s~~~V~kvp 477 (539)
T 3al9_A 415 VVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYV-MSERQVTRVP 477 (539)
T ss_dssp EEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEE-ECSSEEEEEE
T ss_pred EEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEE-Eeccccceee
Confidence 49999999999998653221 1222212 377743 899997654 554 4555677664
No 282
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=68.23 E-value=23 Score=30.79 Aligned_cols=62 Identities=11% Similarity=0.024 Sum_probs=38.0
Q ss_pred CCCcEEEEecCcEEEEEEcCCCceeEEeeecCCC------------CCceeECCCCCEEEEeCCCceEEeCC-CCeE
Q 032726 62 RKGALYTATNDGWVKYFILHNETLVNWKHIDSQS------------LLGLTTTKEGDVVICDSKKVRQHTNS-QALI 125 (135)
Q Consensus 62 ~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRP------------pLGl~fd~~G~LiVaDa~~GLl~V~~-~G~v 125 (135)
.+|.+|.++.+|+|+.++..++ .+.|...-+.+ --|+.++ ++.+|+.....-|..+|. +|++
T Consensus 76 ~~g~vyv~~~~~~v~AlD~~tG-~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~-~~~v~v~~~dg~l~alD~~tG~~ 150 (677)
T 1kb0_A 76 VDGIMYVSASWSVVHAIDTRTG-NRIWTYDPQIDRSTGFKGCCDVVNRGVALW-KGKVYVGAWDGRLIALDAATGKE 150 (677)
T ss_dssp ETTEEEEECGGGCEEEEETTTT-EEEEEECCCCCGGGGGGSSSCSCCCCCEEE-TTEEEEECTTSEEEEEETTTCCE
T ss_pred ECCEEEEECCCCeEEEEECCCC-cEEEEEcCCCCccccccccccCCCCCceEE-CCEEEEEcCCCEEEEEECCCCCE
Confidence 4789999999999999987444 34443321111 0133442 456777666666777774 4654
No 283
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=67.46 E-value=25 Score=26.36 Aligned_cols=61 Identities=20% Similarity=0.141 Sum_probs=36.9
Q ss_pred eeeeeeC--CC-cEEEEecCcEEEEEEcCCCceeE---EeeecCCCCCceeECCC--CCEEEEeCCCceEE
Q 032726 56 DVSVVVR--KG-ALYTATNDGWVKYFILHNETLVN---WKHIDSQSLLGLTTTKE--GDVVICDSKKVRQH 118 (135)
Q Consensus 56 di~avd~--~G-~lYTg~~dG~I~ri~~~~~~~~~---~~~t~GRPpLGl~fd~~--G~LiVaDa~~GLl~ 118 (135)
++ ++.+ +| .+++|..||.|.-|+..++..+. +..-.+.. ..++|+++ |+++++-..-|-++
T Consensus 62 ~v-~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V-~~v~~~p~~~g~~lasgs~D~~i~ 130 (316)
T 3bg1_A 62 QV-AWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSV-NSVCWAPHDYGLILACGSSDGAIS 130 (316)
T ss_dssp EE-EECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCC-CEEEECCTTTCSCEEEECSSSCEE
T ss_pred EE-EeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCce-EEEEECCCCCCcEEEEEcCCCCEE
Confidence 45 4543 34 69999999999888764443222 21122334 78899876 66666555444433
No 284
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=67.25 E-value=21 Score=32.01 Aligned_cols=55 Identities=13% Similarity=0.093 Sum_probs=37.0
Q ss_pred ceeeeeeCCCc-EEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEE-EeCC
Q 032726 55 EDVSVVVRKGA-LYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVI-CDSK 113 (135)
Q Consensus 55 Edi~avd~~G~-lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiV-aDa~ 113 (135)
.++ ++.+ |. ++++..||.|.-|+..++.. ..+.+ .++. ..++|+++|+.++ ++..
T Consensus 62 ~~l-~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~-~~~V-~~v~~sp~g~~l~sgs~d 119 (902)
T 2oaj_A 62 KEM-RFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFV-PGKI-TSIDTDASLDWMLIGLQN 119 (902)
T ss_dssp EEE-EEET-TTEEEEEETTCEEEEEETTTCSEEEEEEC-SSCE-EEEECCTTCSEEEEEETT
T ss_pred EEE-EEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcC-CCCE-EEEEECCCCCEEEEEcCC
Confidence 466 5777 66 99999999999887754432 33332 3455 7888988887544 4433
No 285
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=67.11 E-value=20 Score=27.98 Aligned_cols=63 Identities=13% Similarity=0.087 Sum_probs=38.1
Q ss_pred CceeeeeeCCC-cEEEEe--cCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCCCEEEEeCCCceEE
Q 032726 54 PEDVSVVVRKG-ALYTAT--NDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQH 118 (135)
Q Consensus 54 PEdi~avd~~G-~lYTg~--~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~ 118 (135)
.-++ ++.+++ .++++. .||.|.-|+..++.. ..+.--.++- ..++|+++|+.++.=+.-|-++
T Consensus 323 v~~~-~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V-~~l~~spdg~~l~S~s~D~tvr 389 (420)
T 4gga_A 323 VCSI-LWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRV-LSLTMSPDGATVASAAADETLR 389 (420)
T ss_dssp EEEE-EEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCE-EEEEECTTSSCEEEEETTTEEE
T ss_pred eeee-eecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCE-EEEEEcCCCCEEEEEecCCeEE
Confidence 3455 456555 566654 799998887644432 2222113555 8999999998766544444433
No 286
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=67.00 E-value=30 Score=29.96 Aligned_cols=62 Identities=11% Similarity=0.039 Sum_probs=35.9
Q ss_pred CCCcEEEEecCcEEEEEEcCCCceeEEeeecCCC------------CCceeECCCCCEEEEeCCCceEEeCC-CCeE
Q 032726 62 RKGALYTATNDGWVKYFILHNETLVNWKHIDSQS------------LLGLTTTKEGDVVICDSKKVRQHTNS-QALI 125 (135)
Q Consensus 62 ~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRP------------pLGl~fd~~G~LiVaDa~~GLl~V~~-~G~v 125 (135)
.+|.+|.++.+|+|+.++..+++ +.|...-+.+ .-|+.++ ++.+|+.....-|..+|. +|++
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~~~dg~l~alD~~tG~~ 139 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGK-ELWRYDPEVAKVKARTSCCDAVNRGVALW-GDKVYVGTLDGRLIALDAKTGKA 139 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCC-EEEEECCCCCGGGGGGCTTCSCCCCCEEE-BTEEEEECTTSEEEEEETTTCCE
T ss_pred ECCEEEEECCCCeEEEEECCCCh-hceEECCCCCccccccccccCCccceEEE-CCEEEEEcCCCEEEEEECCCCCE
Confidence 47899999999999999874443 3443321111 0123332 345666655555666663 4544
No 287
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=65.82 E-value=19 Score=32.28 Aligned_cols=66 Identities=20% Similarity=0.126 Sum_probs=40.6
Q ss_pred CCCceeeeeeCCC-cEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEEeCCCceEEeC
Q 032726 52 SHPEDVSVVVRKG-ALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVICDSKKVRQHTN 120 (135)
Q Consensus 52 ~GPEdi~avd~~G-~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVaDa~~GLl~V~ 120 (135)
....++ +++++| .+.+|..||.|.-|+..+... ........+...++|.+ |+ |+.++...-+...|
T Consensus 18 ~~V~~l-afspdg~~lAsgs~Dg~I~lw~~~~~~~-~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd 85 (902)
T 2oaj_A 18 SKPIAA-AFDFTQNLLAIATVTGEVHIYGQQQVEV-VIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLS 85 (902)
T ss_dssp SCEEEE-EEETTTTEEEEEETTSEEEEECSTTCEE-EEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEE
T ss_pred CCcEEE-EECCCCCEEEEEeCCCEEEEEeCCCcEE-EEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEE
Confidence 345688 699888 589999999998885532222 11111222337888888 77 55565554444444
No 288
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=65.72 E-value=26 Score=31.50 Aligned_cols=63 Identities=11% Similarity=0.119 Sum_probs=38.6
Q ss_pred eeeeeeCCC---cEEEEecCcEEEEEEcCCCc--eeEEee----ecCCCC-CceeECCCC-CEEEEeCCCceEEeC
Q 032726 56 DVSVVVRKG---ALYTATNDGWVKYFILHNET--LVNWKH----IDSQSL-LGLTTTKEG-DVVICDSKKVRQHTN 120 (135)
Q Consensus 56 di~avd~~G---~lYTg~~dG~I~ri~~~~~~--~~~~~~----t~GRPp-LGl~fd~~G-~LiVaDa~~GLl~V~ 120 (135)
+| ++|..+ -+|.|+.||+|.|+...... ...++. -.|.|. ..|.++++. .||| -...++.+|.
T Consensus 403 ~V-aV~~~~~~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv-~s~~~V~qvP 476 (681)
T 3oky_A 403 SV-ASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYV-MSERQVTRVP 476 (681)
T ss_dssp CC-EEEEETTEEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEE-ECSSEEEEEE
T ss_pred EE-EEEecCceEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEE-EecCEEEEEE
Confidence 56 466433 48999999999998653211 112222 146663 389999764 5665 4556677765
No 289
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=65.09 E-value=10 Score=31.83 Aligned_cols=53 Identities=4% Similarity=-0.059 Sum_probs=34.9
Q ss_pred ceeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeeecC----CCCCceeECCCCCEEE
Q 032726 55 EDVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHIDS----QSLLGLTTTKEGDVVI 109 (135)
Q Consensus 55 Edi~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~G----RPpLGl~fd~~G~LiV 109 (135)
-++ .+.++|.+.....||.|+.++..++....+..-.. .. ..++|++||+.++
T Consensus 19 ~~~-~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~SpDg~~la 75 (719)
T 1z68_A 19 FFP-NWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNA-SNYGLSPDRQFVY 75 (719)
T ss_dssp CCC-EESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTC-SEEEECTTSSEEE
T ss_pred Ccc-EECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccce-eeEEECCCCCeEE
Confidence 366 57788887777789999999875554433321111 13 5788999998544
No 290
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=64.90 E-value=13 Score=31.59 Aligned_cols=62 Identities=15% Similarity=0.100 Sum_probs=36.0
Q ss_pred ceeeeeeCCC---cEEEEecCcEEEEEEcCCCc-----eeEE-eeecCCCCCceeECCC-CCEEEEeCCCceEEe
Q 032726 55 EDVSVVVRKG---ALYTATNDGWVKYFILHNET-----LVNW-KHIDSQSLLGLTTTKE-GDVVICDSKKVRQHT 119 (135)
Q Consensus 55 Edi~avd~~G---~lYTg~~dG~I~ri~~~~~~-----~~~~-~~t~GRPpLGl~fd~~-G~LiVaDa~~GLl~V 119 (135)
-+| ++|..+ -+|.|+.||+|.|+....+. .+.+ ..-.|.| .-..++.+ +.|||. ...++.+|
T Consensus 408 T~i-av~~~~~~tV~FlGT~~G~l~Kv~~~~~~~~~~~~~~~~~~~~~~p-i~~~l~~~~~~Lyv~-s~~~V~~v 479 (527)
T 4fww_A 408 TAL-YVTRLDNVTVAHMGTMDGRILQVELVRSLNYLLYVSNFSLGDSGQP-VQRDVSRLGDHLLFA-SGDQVFQV 479 (527)
T ss_dssp EEE-EEEEETTEEEEEEEETTSEEEEEECSCCSSCCCEEEEEEETTSCCC-BCSCCEEETTEEEEE-ETTEEEEE
T ss_pred EEE-EEeccCCEEEEEEECCCCeEEEEEEcCCCCcceEEEEEEecCCCce-eehhcccCCCEEEEE-ECCEEEEE
Confidence 366 577544 38999999999998542221 1222 2235677 55444433 356655 44456665
No 291
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=64.74 E-value=17 Score=32.60 Aligned_cols=54 Identities=15% Similarity=0.148 Sum_probs=34.2
Q ss_pred EEEEecCcEEEEEEcC-CCc--------eeEE-eeecCCCCCceeECCCC-CEEEEeCCCceEEeC
Q 032726 66 LYTATNDGWVKYFILH-NET--------LVNW-KHIDSQSLLGLTTTKEG-DVVICDSKKVRQHTN 120 (135)
Q Consensus 66 lYTg~~dG~I~ri~~~-~~~--------~~~~-~~t~GRPpLGl~fd~~G-~LiVaDa~~GLl~V~ 120 (135)
+|.|+.||+|.|+-.. ++. .|.+ ..-.+.|...|.+|++. .|||. ...++.+|-
T Consensus 432 lFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~-t~~~V~kVP 496 (667)
T 4gz8_A 432 MFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIG-STAGVAQLP 496 (667)
T ss_dssp EEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEE-BSSCEEEEE
T ss_pred EEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEE-ECCEEEEEE
Confidence 8999999999997431 111 1111 12357887789999765 46654 556677765
No 292
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=64.73 E-value=30 Score=30.77 Aligned_cols=55 Identities=13% Similarity=0.051 Sum_probs=33.8
Q ss_pred cEEEEecCcEEEEEEcCCCce---eEE-eeecCCCCCceeECCCC---CEEEEeCCCceEEeC
Q 032726 65 ALYTATNDGWVKYFILHNETL---VNW-KHIDSQSLLGLTTTKEG---DVVICDSKKVRQHTN 120 (135)
Q Consensus 65 ~lYTg~~dG~I~ri~~~~~~~---~~~-~~t~GRPpLGl~fd~~G---~LiVaDa~~GLl~V~ 120 (135)
-+|-|+.||+|+|+-...... +.+ ..-.|.|...|.++++. .|||. ...++.+|-
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~-s~~~V~~vp 478 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAG-SNSGVVQAP 478 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEE-CSSCEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEE-EcCeEEEEE
Confidence 388999999999984423221 222 12236776678888653 45554 445566664
No 293
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=64.32 E-value=7.3 Score=31.90 Aligned_cols=33 Identities=9% Similarity=0.003 Sum_probs=24.1
Q ss_pred CCCcEEEEecCcEEEEEEcCCCceeEEeeecCCC
Q 032726 62 RKGALYTATNDGWVKYFILHNETLVNWKHIDSQS 95 (135)
Q Consensus 62 ~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRP 95 (135)
.+|.+|+|.++|+++-++..+|+ ..|...-|.|
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~-~~W~~~~~~~ 142 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGE-IISAFGPGSK 142 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCC-EEEEESTTCB
T ss_pred cCCEEEEEecCCEEEEEECCCCc-EEEEEecCCC
Confidence 57899999999999999885554 3344444444
No 294
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=63.70 E-value=41 Score=24.83 Aligned_cols=54 Identities=7% Similarity=-0.032 Sum_probs=33.2
Q ss_pred CceeeeeeCCCc-EEEEecC---c--EEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEE
Q 032726 54 PEDVSVVVRKGA-LYTATND---G--WVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVIC 110 (135)
Q Consensus 54 PEdi~avd~~G~-lYTg~~d---G--~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVa 110 (135)
..++ .+.+||+ ++....+ | .|+.++..++....+....+ . -.++|.++|+ |+++
T Consensus 61 ~~~~-~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~-~~~~wspdg~~l~~~ 121 (347)
T 2gop_A 61 ATMP-RISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-I-RSLEWNEDSRKLLIV 121 (347)
T ss_dssp CEEE-EECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-E-EEEEECTTSSEEEEE
T ss_pred CCCe-EECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-c-cceeECCCCCEEEEE
Confidence 4456 6888984 5555443 3 48888764554444443334 5 7889999987 4444
No 295
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=63.01 E-value=28 Score=30.93 Aligned_cols=65 Identities=6% Similarity=-0.110 Sum_probs=41.1
Q ss_pred eccCCcCCCceeeee-e-CC-CcEEEEe------------------cCcEEEEEEcCCCceeEEeeecCCCCCceeECCC
Q 032726 46 LGEGCVSHPEDVSVV-V-RK-GALYTAT------------------NDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKE 104 (135)
Q Consensus 46 l~~g~~~GPEdi~av-d-~~-G~lYTg~------------------~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~ 104 (135)
+..+...+|+.+ ++ . ++ +.+|.+. .++.+-.|+....+...-..++|+| =|++++++
T Consensus 128 i~ip~g~~phg~-~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~p-d~~~~spd 205 (595)
T 1fwx_A 128 LEIPNAKGIHGL-RPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNL-DNCDADYE 205 (595)
T ss_dssp EECSSCCSEEEE-EECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCC-CCEEECSS
T ss_pred EeCCCCCCCcce-eeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCc-cceEECCC
Confidence 334445799999 56 3 44 4799985 2345556655322222234678998 99999999
Q ss_pred CCEEEEeC
Q 032726 105 GDVVICDS 112 (135)
Q Consensus 105 G~LiVaDa 112 (135)
|.....-+
T Consensus 206 Gk~~~vt~ 213 (595)
T 1fwx_A 206 GKWAFSTS 213 (595)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEEe
Confidence 87544333
No 296
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=62.70 E-value=31 Score=29.95 Aligned_cols=52 Identities=13% Similarity=0.017 Sum_probs=27.8
Q ss_pred cEEEEEEcCCCceeEEeeecCCCCCceeECCCC-CEEEEeCCCceEEeCC-CCeE
Q 032726 73 GWVKYFILHNETLVNWKHIDSQSLLGLTTTKEG-DVVICDSKKVRQHTNS-QALI 125 (135)
Q Consensus 73 G~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G-~LiVaDa~~GLl~V~~-~G~v 125 (135)
|.|.-|+..++ ...|....|.|..|-.+...| .+|+.....-+..+|. +|++
T Consensus 457 g~l~A~D~~tG-~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 457 GRLLAWDPVAQ-KAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp EEEEEEETTTT-EEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cEEEEEeCCCC-cEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence 88999987444 344544344443676665433 3455544444555553 3543
No 297
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=62.10 E-value=19 Score=30.06 Aligned_cols=56 Identities=5% Similarity=-0.096 Sum_probs=35.9
Q ss_pred CCceeeeeeCCCcEEEEecCcEEEEEEcCC-----CceeEEeeec---------------CCCCCceeECCCCCEEEE
Q 032726 53 HPEDVSVVVRKGALYTATNDGWVKYFILHN-----ETLVNWKHID---------------SQSLLGLTTTKEGDVVIC 110 (135)
Q Consensus 53 GPEdi~avd~~G~lYTg~~dG~I~ri~~~~-----~~~~~~~~t~---------------GRPpLGl~fd~~G~LiVa 110 (135)
...++ .+.+||+...-..|+.|+.++..+ +....+...+ +++ -+++|+++|+.++.
T Consensus 122 ~~~~~-~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~-~~~~~SpDg~~la~ 197 (706)
T 2z3z_A 122 ETASL-DFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIE-KGTFWSPKGSCLAF 197 (706)
T ss_dssp CCTTC-EECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCC-CSEEECTTSSEEEE
T ss_pred cccCC-cCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCC-ceEEECCCCCEEEE
Confidence 45678 689999633336899999987644 4333222212 235 79999999985543
No 298
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=61.09 E-value=25 Score=31.03 Aligned_cols=55 Identities=7% Similarity=0.248 Sum_probs=34.5
Q ss_pred cEEEEecCcEEEEEEcCCC------c---eeEEe---e-------ecCCCCCceeECCCC-CEEEEeCCCceEEeC
Q 032726 65 ALYTATNDGWVKYFILHNE------T---LVNWK---H-------IDSQSLLGLTTTKEG-DVVICDSKKVRQHTN 120 (135)
Q Consensus 65 ~lYTg~~dG~I~ri~~~~~------~---~~~~~---~-------t~GRPpLGl~fd~~G-~LiVaDa~~GLl~V~ 120 (135)
-+|.|+.+|+|.|+-...+ . .|.+. . ..++|.+.|.+|++. .||| -...++.+|.
T Consensus 422 VlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~LYV-~s~~~V~qVP 496 (565)
T 3oky_B 422 VVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGSLYV-AFSTCVIKVP 496 (565)
T ss_dssp EEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTEEEE-ECSSCEEEEE
T ss_pred EEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCEEEE-EecCeEEEee
Confidence 3888999999999854211 0 11111 0 126787789999664 5665 4556677765
No 299
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=60.99 E-value=39 Score=28.86 Aligned_cols=70 Identities=11% Similarity=0.086 Sum_probs=39.4
Q ss_pred CCceeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeeecCCCC----------CceeECCCCCEEEEeCCCceEEeCC-
Q 032726 53 HPEDVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHIDSQSL----------LGLTTTKEGDVVICDSKKVRQHTNS- 121 (135)
Q Consensus 53 GPEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPp----------LGl~fd~~G~LiVaDa~~GLl~V~~- 121 (135)
|.++-.++ .+|.+|.++.++.|+.++..+++ +.|...-+.+. -|.+. .++.+|+....--|+.+|.
T Consensus 59 g~~~~P~v-~~g~vyv~~~~~~v~AlD~~tG~-~~W~~~~~~~~~~~~~~~~~~~g~a~-~~~~v~~~t~dg~l~AlD~~ 135 (582)
T 1flg_A 59 GQESQAIV-SDGVIYVTASYSRLFALDAKTGK-RLWTYNHRLPDDIRPCCDVVNRGAAI-YGDKVFFGTLDASVVALNKN 135 (582)
T ss_dssp CCCCCCEE-ETTEEEEEETTTEEEEEESSSCC-EEEEEECCCCTTCCCSSCSCCCCCEE-ETTEEEEEETTTEEEEEESS
T ss_pred cceeccEE-ECCEEEEEcCCCCEEEEECCCCc-EEEEEcCCCCcccccccccCCCccEE-ECCEEEEEeCCCEEEEEECC
Confidence 44443223 47899999997779999874443 34433222110 13333 2456666665556777774
Q ss_pred CCeE
Q 032726 122 QALI 125 (135)
Q Consensus 122 ~G~v 125 (135)
+|++
T Consensus 136 TG~~ 139 (582)
T 1flg_A 136 TGKV 139 (582)
T ss_dssp SCCE
T ss_pred CCCE
Confidence 4654
No 300
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=60.98 E-value=33 Score=26.65 Aligned_cols=27 Identities=19% Similarity=0.314 Sum_probs=21.4
Q ss_pred eeeeeeCCC-cEEEEecCcEEEEEEcCCC
Q 032726 56 DVSVVVRKG-ALYTATNDGWVKYFILHNE 83 (135)
Q Consensus 56 di~avd~~G-~lYTg~~dG~I~ri~~~~~ 83 (135)
++ ++.++| .+.+|..||.|.-|+..++
T Consensus 152 sv-~fspdg~~lasgs~Dg~v~iWd~~~~ 179 (420)
T 4gga_A 152 SV-AWIKEGNYLAVGTSSAEVQLWDVQQQ 179 (420)
T ss_dssp EE-EECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EE-EECCCCCEEEEEECCCeEEEEEcCCC
Confidence 56 577888 5889999999988876444
No 301
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=60.93 E-value=43 Score=23.99 Aligned_cols=59 Identities=10% Similarity=0.101 Sum_probs=34.9
Q ss_pred eeCCCcEEEEecCcEEEEEEcCCCcee-EEe-eecCCCCCceeECCCCCEEEEeCCCceEEe
Q 032726 60 VVRKGALYTATNDGWVKYFILHNETLV-NWK-HIDSQSLLGLTTTKEGDVVICDSKKVRQHT 119 (135)
Q Consensus 60 vd~~G~lYTg~~dG~I~ri~~~~~~~~-~~~-~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V 119 (135)
..+++.| +...|+.|.-|+..++... .+. +..+.+-..++|+++|+.++.=..-|-+++
T Consensus 33 WS~~~~l-Avg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~i 93 (318)
T 4ggc_A 33 WSSGNVL-AVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQL 93 (318)
T ss_dssp ECTTSEE-EEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ECCCCEE-EEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEE
Confidence 4455544 4445999988877555433 222 122233367899999987766555554443
No 302
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=60.39 E-value=39 Score=29.41 Aligned_cols=27 Identities=22% Similarity=0.279 Sum_probs=20.8
Q ss_pred CCCcEEEEecCcEEEEEEcCCCceeEEe
Q 032726 62 RKGALYTATNDGWVKYFILHNETLVNWK 89 (135)
Q Consensus 62 ~~G~lYTg~~dG~I~ri~~~~~~~~~~~ 89 (135)
.+|.+|.++.+|+|+.++..+| .+.|.
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG-~~~W~ 95 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDG-RLIWK 95 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTC-CEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCC-ceeEE
Confidence 3789999999999999987444 34443
No 303
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=59.77 E-value=39 Score=26.33 Aligned_cols=25 Identities=8% Similarity=0.070 Sum_probs=18.4
Q ss_pred eeCCC-cEEEEecCcEEEEEEcCCCc
Q 032726 60 VVRKG-ALYTATNDGWVKYFILHNET 84 (135)
Q Consensus 60 vd~~G-~lYTg~~dG~I~ri~~~~~~ 84 (135)
+..+| .+.+|..||.|.-++..++.
T Consensus 139 ~~~d~~~l~~g~~dg~i~iwd~~~~~ 164 (435)
T 1p22_A 139 LQYDDQKIVSGLRDNTIKIWDKNTLE 164 (435)
T ss_dssp EECCSSEEEEEESSSCEEEEESSSCC
T ss_pred EEECCCEEEEEeCCCeEEEEeCCCCe
Confidence 44444 79999999999998764443
No 304
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=58.79 E-value=20 Score=27.95 Aligned_cols=55 Identities=9% Similarity=0.101 Sum_probs=32.7
Q ss_pred CC-cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCceeECCCC-CEEEEeCCCceEE
Q 032726 63 KG-ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKEG-DVVICDSKKVRQH 118 (135)
Q Consensus 63 ~G-~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl~fd~~G-~LiVaDa~~GLl~ 118 (135)
|| .|.+|..|+.|.-|+..++.. .....-.+.. ..++|++++ ++++.-...|.++
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v-~~v~~~p~~~~~l~~~~~d~~v~ 212 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPG-ISVQFRPSNPNQLIVGERNGNIR 212 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCE-EEEEEETTEEEEEEEEETTSEEE
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeecCCCCCc-EEEEECCCCCceEEecCCCCEEE
Confidence 45 588999999998887533332 2222223444 789999876 4444433444433
No 305
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=58.34 E-value=31 Score=28.96 Aligned_cols=28 Identities=14% Similarity=0.220 Sum_probs=21.6
Q ss_pred ceeeeeeCCCcEEEEecCcEEEEEEcCCC
Q 032726 55 EDVSVVVRKGALYTATNDGWVKYFILHNE 83 (135)
Q Consensus 55 Edi~avd~~G~lYTg~~dG~I~ri~~~~~ 83 (135)
.++ ++.+++.|++|..||.|.-|+..++
T Consensus 270 ~sv-~~s~~~~lasgs~DgtV~lWD~~~~ 297 (524)
T 2j04_B 270 TTF-DFLSPTTVVCGFKNGFVAEFDLTDP 297 (524)
T ss_dssp EEE-EESSSSEEEEEETTSEEEEEETTBC
T ss_pred EEE-EecCCCeEEEEeCCCEEEEEECCCC
Confidence 356 4656779999999999998877433
No 306
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=58.34 E-value=27 Score=29.96 Aligned_cols=54 Identities=11% Similarity=0.107 Sum_probs=33.3
Q ss_pred EEEEecCcEEEEEEcCCCc---------eeEEee-ecCCCCCceeECCCC-CEEEEeCCCceEEeC
Q 032726 66 LYTATNDGWVKYFILHNET---------LVNWKH-IDSQSLLGLTTTKEG-DVVICDSKKVRQHTN 120 (135)
Q Consensus 66 lYTg~~dG~I~ri~~~~~~---------~~~~~~-t~GRPpLGl~fd~~G-~LiVaDa~~GLl~V~ 120 (135)
+|-|+.||+|.|+-...+. .+.+.- -.|.|...|.+|++. .|||. ...++.+|-
T Consensus 424 ~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~-s~~~V~~vp 488 (495)
T 1q47_A 424 MFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIG-STAGVAQLP 488 (495)
T ss_dssp EEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEE-BSSCEEEEE
T ss_pred EEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEE-ECCeEEEEE
Confidence 8899999999998652111 122221 136776788888765 56654 445566653
No 307
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=58.04 E-value=25 Score=30.52 Aligned_cols=49 Identities=24% Similarity=0.369 Sum_probs=31.8
Q ss_pred eCCCcEEEEecCcEEEEEEcCCCceeEEee-ecCCCCCc--eeECCCCCEEEEe
Q 032726 61 VRKGALYTATNDGWVKYFILHNETLVNWKH-IDSQSLLG--LTTTKEGDVVICD 111 (135)
Q Consensus 61 d~~G~lYTg~~dG~I~ri~~~~~~~~~~~~-t~GRPpLG--l~fd~~G~LiVaD 111 (135)
..+|.+|.|+.||+++-++..+++ +.|.. ++++- .+ +.+..+|++||+-
T Consensus 482 tagg~vf~gt~dg~l~A~D~~tG~-~lW~~~l~~g~-~~~P~~y~~~G~qyv~~ 533 (599)
T 1w6s_A 482 TAGDLVFYGTLDGYLKARDSDTGD-LLWKFKIPSGA-IGYPMTYTHKGTQYVAI 533 (599)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCC-EEEEEECSSCC-CSCCEEEEETTEEEEEE
T ss_pred ecCCEEEEECCCCeEEEEECCCCC-EEEEeeCCCCc-EeccEEEEeCCEEEEEE
Confidence 367899999999999999875554 34432 33211 11 4555788877643
No 308
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=57.93 E-value=29 Score=30.06 Aligned_cols=22 Identities=18% Similarity=0.196 Sum_probs=18.7
Q ss_pred CCcEEEEecCcEEEEEEcCCCc
Q 032726 63 KGALYTATNDGWVKYFILHNET 84 (135)
Q Consensus 63 ~G~lYTg~~dG~I~ri~~~~~~ 84 (135)
+|.+|.++.||+|+-++..+++
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~ 138 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGK 138 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCEEEEEECCCCC
Confidence 6799999999999999875554
No 309
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=57.48 E-value=18 Score=27.81 Aligned_cols=46 Identities=17% Similarity=0.034 Sum_probs=28.6
Q ss_pred EecCcEEEEEEcCCCc-----------------eeEEeeecCCCCCceeECCCCCEEEEeCCCc
Q 032726 69 ATNDGWVKYFILHNET-----------------LVNWKHIDSQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 69 g~~dG~I~ri~~~~~~-----------------~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
|..||.|.-++..++. ...+..-.+.. ..++|+++|++++.-+.-|
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v-~~~~~s~~g~~l~s~s~d~ 217 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPI-KMVRLNRKSDMVATCSQDG 217 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCE-EEEEECTTSSEEEEEETTC
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCce-EEEEECCCCCEEEEEeCCC
Confidence 6889998877764332 22222223444 7899999998776555555
No 310
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=57.09 E-value=65 Score=27.87 Aligned_cols=63 Identities=16% Similarity=0.133 Sum_probs=38.2
Q ss_pred CCCcEEEEec-CcEEEEEEc-CCCceeEEeee------------cCCCCCceeEC-CCCC----EEEEeCCCceEEeCC-
Q 032726 62 RKGALYTATN-DGWVKYFIL-HNETLVNWKHI------------DSQSLLGLTTT-KEGD----VVICDSKKVRQHTNS- 121 (135)
Q Consensus 62 ~~G~lYTg~~-dG~I~ri~~-~~~~~~~~~~t------------~GRPpLGl~fd-~~G~----LiVaDa~~GLl~V~~- 121 (135)
.+|.+|.++. +|+|+.++. .+++ +.|... |+..--|+++. .+|. +|+....--|+.+|.
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~-~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 61 VDGKMYIHTSFPNNTFALGLDDPGT-ILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAE 139 (599)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTS-EEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETT
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCCc-EEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECC
Confidence 3789999999 999999987 5554 333221 11100244552 2344 777766666777774
Q ss_pred CCeE
Q 032726 122 QALI 125 (135)
Q Consensus 122 ~G~v 125 (135)
+|++
T Consensus 140 TG~~ 143 (599)
T 1w6s_A 140 TGET 143 (599)
T ss_dssp TCCE
T ss_pred CCCE
Confidence 5665
No 311
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=55.83 E-value=28 Score=29.16 Aligned_cols=56 Identities=5% Similarity=-0.063 Sum_probs=35.3
Q ss_pred CCceeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeeec-------------------CCCCCceeECCCCCEEEE
Q 032726 53 HPEDVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHID-------------------SQSLLGLTTTKEGDVVIC 110 (135)
Q Consensus 53 GPEdi~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~-------------------GRPpLGl~fd~~G~LiVa 110 (135)
+..++ ++.+||+...-..|+.|+.++..++....+...+ ++. -+++|.+||+.++.
T Consensus 111 ~~~~~-~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~-~~~~wSPDG~~la~ 185 (719)
T 1z68_A 111 PIQYL-CWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK-YALWWSPNGKFLAY 185 (719)
T ss_dssp SBCCE-EECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSS-CCEEECTTSSEEEE
T ss_pred ccccc-eECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCc-ccEEECCCCCEEEE
Confidence 45567 6899996444447899998866444333222111 333 48999999986653
No 312
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=55.49 E-value=21 Score=30.57 Aligned_cols=64 Identities=13% Similarity=0.060 Sum_probs=34.5
Q ss_pred ceeeeeeCCCc-EEEEecC---------cEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeCCCceEEeC
Q 032726 55 EDVSVVVRKGA-LYTATND---------GWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDSKKVRQHTN 120 (135)
Q Consensus 55 Edi~avd~~G~-lYTg~~d---------G~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa~~GLl~V~ 120 (135)
+++ .+.+||+ |+.+..+ |.|+-++..++....+....++- .-.+|+++|+.++.-...-|+..+
T Consensus 65 ~~~-~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~-~~~~~SPdG~~la~~~~~~i~~~~ 138 (740)
T 4a5s_A 65 NDY-SISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNT-QWVTWSPVGHKLAYVWNNDIYVKI 138 (740)
T ss_dssp CEE-EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTE-EEEEECSSTTCEEEEETTEEEEES
T ss_pred cce-EECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcc-eeeEECCCCCEEEEEECCeEEEEE
Confidence 457 5889995 6777766 55556665444433332222332 445667777643333334455554
No 313
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=53.12 E-value=41 Score=29.47 Aligned_cols=67 Identities=12% Similarity=0.106 Sum_probs=43.0
Q ss_pred eeeeeeCC--CcEEEEecCcEEEEEEcCCCceeEEee-ec-----CCCCCceeECC--CCCEEEEeC---------CCce
Q 032726 56 DVSVVVRK--GALYTATNDGWVKYFILHNETLVNWKH-ID-----SQSLLGLTTTK--EGDVVICDS---------KKVR 116 (135)
Q Consensus 56 di~avd~~--G~lYTg~~dG~I~ri~~~~~~~~~~~~-t~-----GRPpLGl~fd~--~G~LiVaDa---------~~GL 116 (135)
+| +++++ +.+|.++..|.|+|.+....+|+.+.. .+ +...-.|++|+ .+.+||+-. ..||
T Consensus 27 ~i-~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l 105 (737)
T 2cn3_A 27 GI-VFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAI 105 (737)
T ss_dssp EE-EECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEE
T ss_pred EE-EECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccE
Confidence 67 68754 789999999999999753445555322 11 12213678885 357888753 2578
Q ss_pred EEeCCCC
Q 032726 117 QHTNSQA 123 (135)
Q Consensus 117 l~V~~~G 123 (135)
++-+..|
T Consensus 106 ~~S~DgG 112 (737)
T 2cn3_A 106 LRSTDRG 112 (737)
T ss_dssp EEESSSS
T ss_pred EEeCCCC
Confidence 8766655
No 314
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=53.03 E-value=34 Score=30.64 Aligned_cols=56 Identities=5% Similarity=0.010 Sum_probs=35.1
Q ss_pred ceeeeeeCCCc-EEEEecC----------cEEEEEEcCCCceeEEeeecCCCCCceeECCCCCEEEEeC
Q 032726 55 EDVSVVVRKGA-LYTATND----------GWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGDVVICDS 112 (135)
Q Consensus 55 Edi~avd~~G~-lYTg~~d----------G~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~LiVaDa 112 (135)
.++ ++.+||+ +.++..+ +.|+.++..++....+.....+. ..++|+++|+.++.-+
T Consensus 424 ~~~-~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~-~~~~~spdG~~l~~~s 490 (1045)
T 1k32_A 424 TDF-TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHD-YAPAFDADSKNLYYLS 490 (1045)
T ss_dssp CCE-EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBE-EEEEECTTSCEEEEEE
T ss_pred cce-EECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCccc-CCceEcCCCCEEEEEe
Confidence 678 6899996 5555544 48888876544433333333444 6788999998444333
No 315
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=52.60 E-value=28 Score=30.99 Aligned_cols=67 Identities=10% Similarity=0.129 Sum_probs=42.7
Q ss_pred eeeeeeC--CCcEEEEecCcEEEEEEcCCCceeEEee-e-----cCCCCCceeECCC--CCEEEEeCC------CceEEe
Q 032726 56 DVSVVVR--KGALYTATNDGWVKYFILHNETLVNWKH-I-----DSQSLLGLTTTKE--GDVVICDSK------KVRQHT 119 (135)
Q Consensus 56 di~avd~--~G~lYTg~~dG~I~ri~~~~~~~~~~~~-t-----~GRPpLGl~fd~~--G~LiVaDa~------~GLl~V 119 (135)
+| ++++ .+.+|.++..|.|+|-+....+|+.... . .++..-.|++|+. +.+|++-.. -+|++-
T Consensus 19 ~i-~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S 97 (789)
T 1sqj_A 19 GI-VAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVS 97 (789)
T ss_dssp EE-EECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEE
T ss_pred EE-EECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEE
Confidence 56 5764 4789999999999999653335655322 1 1233356788863 468887543 567776
Q ss_pred CCCC
Q 032726 120 NSQA 123 (135)
Q Consensus 120 ~~~G 123 (135)
+..|
T Consensus 98 ~DgG 101 (789)
T 1sqj_A 98 EDRG 101 (789)
T ss_dssp SSTT
T ss_pred CCCC
Confidence 6555
No 316
>3nvn_B Plexin-C1; beta-propeller, signaling, viral protein-signaling protein C; HET: NDG NAG; 2.26A {Homo sapiens} PDB: 3nvq_B*
Probab=51.38 E-value=52 Score=28.64 Aligned_cols=55 Identities=16% Similarity=0.236 Sum_probs=33.6
Q ss_pred cEEEEecCcEEEEEEcCCCce-----eEEeeecCCCCC-ceeECC-CC-CEEEEeCCCceEEeC
Q 032726 65 ALYTATNDGWVKYFILHNETL-----VNWKHIDSQSLL-GLTTTK-EG-DVVICDSKKVRQHTN 120 (135)
Q Consensus 65 ~lYTg~~dG~I~ri~~~~~~~-----~~~~~t~GRPpL-Gl~fd~-~G-~LiVaDa~~GLl~V~ 120 (135)
-+|.|+.+|+|.|+....... ..+....+.|.+ .|.+|+ ++ .|||. ...++.+|.
T Consensus 355 VlFLGTd~G~L~KVvv~~~~~~~~~~~~~ei~ee~~V~~~L~ldp~~~~~LyV~-s~~~V~qVP 417 (476)
T 3nvn_B 355 VLFLGTGDGQLLKVILGENLTSNCPEVIYEIKEETPVFYKLVPDPVKNIYIYLT-AGKEVRRIR 417 (476)
T ss_dssp EEEEEETTSEEEEEECCTTSCCCCCEEEEECTTCCCBCSCCEECSSCTTEEEEE-ETTEEEEEE
T ss_pred EEEEECCCceEEEEEecCCCCccceeEEEeecCCCccccccccCccccceEEEe-cCcEEEEEE
Confidence 489999999999986522211 122233466634 778886 34 56654 445566664
No 317
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=48.97 E-value=46 Score=25.91 Aligned_cols=16 Identities=6% Similarity=0.291 Sum_probs=8.5
Q ss_pred cEEEEecCcEEEEEEc
Q 032726 65 ALYTATNDGWVKYFIL 80 (135)
Q Consensus 65 ~lYTg~~dG~I~ri~~ 80 (135)
.+++|..||.|.-++.
T Consensus 308 ~l~~g~~dg~i~iwd~ 323 (435)
T 1p22_A 308 LVVSGSSDNTIRLWDI 323 (435)
T ss_dssp EEEEEETTSCEEEEET
T ss_pred EEEEEeCCCeEEEEEC
Confidence 4555555555555544
No 318
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=47.06 E-value=42 Score=22.51 Aligned_cols=17 Identities=18% Similarity=0.278 Sum_probs=14.0
Q ss_pred CceeECCCCCEEEEeCC
Q 032726 97 LGLTTTKEGDVVICDSK 113 (135)
Q Consensus 97 LGl~fd~~G~LiVaDa~ 113 (135)
.-+++..+|||++-|..
T Consensus 52 ~~l~l~~dGNLVl~~~~ 68 (111)
T 3mez_A 52 CTLRLNNRGQLEIHSAN 68 (111)
T ss_dssp CEEEECTTSCEEEECSS
T ss_pred EEEEEcCCCcEEEEeCC
Confidence 56788899999998874
No 319
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=46.58 E-value=41 Score=26.55 Aligned_cols=70 Identities=7% Similarity=0.113 Sum_probs=39.3
Q ss_pred ceeeeeeCCCcEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCC---CEEEEeCCCceEEeCCCCeEEEEE
Q 032726 55 EDVSVVVRKGALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEG---DVVICDSKKVRQHTNSQALIIVCV 129 (135)
Q Consensus 55 Edi~avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G---~LiVaDa~~GLl~V~~~G~v~vl~ 129 (135)
||+ + ..+-.+.+-+++|+|.|...++-. . .+.+|+..-++.+..+. .+++|+...=++-++..|++..+.
T Consensus 2 edl-i-~~e~~~v~~T~~G~iKr~~~~~~~--~-~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~ 74 (312)
T 1suu_A 2 SDL-M-QKENIVVMLTKKGFLKRLSQNEYK--L-QGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLIN 74 (312)
T ss_dssp --------CEEEEEEETTCBEEEEEGGGSC--B-CCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEE
T ss_pred ccc-c-CCCCEEEEEeCCCEEEEeEHHHhh--c-cccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEE
Confidence 555 2 334468899999999999652111 1 12233332355554333 245677777788888888776553
No 320
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=46.16 E-value=61 Score=25.12 Aligned_cols=16 Identities=6% Similarity=0.243 Sum_probs=7.6
Q ss_pred cEEEEecCcEEEEEEc
Q 032726 65 ALYTATNDGWVKYFIL 80 (135)
Q Consensus 65 ~lYTg~~dG~I~ri~~ 80 (135)
.+++|..||.|.-++.
T Consensus 211 ~l~s~s~dg~i~~wd~ 226 (445)
T 2ovr_B 211 RVVSGSRDATLRVWDI 226 (445)
T ss_dssp EEEEEETTSEEEEEES
T ss_pred EEEEEeCCCEEEEEEC
Confidence 4455555555444443
No 321
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=44.50 E-value=13 Score=30.22 Aligned_cols=65 Identities=8% Similarity=0.067 Sum_probs=37.7
Q ss_pred CceeeeeeCCCc-EE----EEecCcEEEEEEcCCC-----ce----eEEee---ecCCCCCceeECCC-CCEEE-EeCCC
Q 032726 54 PEDVSVVVRKGA-LY----TATNDGWVKYFILHNE-----TL----VNWKH---IDSQSLLGLTTTKE-GDVVI-CDSKK 114 (135)
Q Consensus 54 PEdi~avd~~G~-lY----Tg~~dG~I~ri~~~~~-----~~----~~~~~---t~GRPpLGl~fd~~-G~LiV-aDa~~ 114 (135)
..++ +++++|+ ++ +|..||.|.-|+..+. .. ..+.. -.++. ..++|+++ +++++ +....
T Consensus 95 v~~l-~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V-~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 95 IHHL-ALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMV-IDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp EEEE-EECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSE-EEEEECSSCTTEEEEEETTS
T ss_pred ccEE-EEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCce-EEEEECCCCCCEEEEEECCC
Confidence 5678 6888885 66 6788998877765221 00 11111 14455 89999986 67665 44333
Q ss_pred ceEEeC
Q 032726 115 VRQHTN 120 (135)
Q Consensus 115 GLl~V~ 120 (135)
-+...|
T Consensus 173 ~v~iwD 178 (434)
T 2oit_A 173 SIAVLQ 178 (434)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 333333
No 322
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=44.16 E-value=1.4e+02 Score=24.77 Aligned_cols=70 Identities=9% Similarity=0.027 Sum_probs=45.1
Q ss_pred CCCceeeeeeCC----C-cEEEEecCc-EEEEEEc---CCC----ceeEEeeec--CCCCCceeEC-CCCCEEEEeCCC-
Q 032726 52 SHPEDVSVVVRK----G-ALYTATNDG-WVKYFIL---HNE----TLVNWKHID--SQSLLGLTTT-KEGDVVICDSKK- 114 (135)
Q Consensus 52 ~GPEdi~avd~~----G-~lYTg~~dG-~I~ri~~---~~~----~~~~~~~t~--GRPpLGl~fd-~~G~LiVaDa~~- 114 (135)
.|--.| +++++ + .+|..--.| +++++.. .+. ..+.+...+ +.. .|+++| ++|+||+.+-..
T Consensus 220 ~Gi~gI-aLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~-~~~~~D~~~G~ly~~~~~~~ 297 (381)
T 3q6k_A 220 AGIFGI-TLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDA-IALAYDPKTKVIFFAEANTK 297 (381)
T ss_dssp CCEEEE-EECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCE-EEEEECTTTCEEEEEESSSS
T ss_pred cCceEE-EecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCc-ceEEEeCCCCeEEEEeccCC
Confidence 366677 57654 3 577765555 7988853 111 234444444 344 578897 899999998764
Q ss_pred ceEEeCCCC
Q 032726 115 VRQHTNSQA 123 (135)
Q Consensus 115 GLl~V~~~G 123 (135)
++...++++
T Consensus 298 aI~~w~~~~ 306 (381)
T 3q6k_A 298 QVSCWNTQK 306 (381)
T ss_dssp EEEEEETTS
T ss_pred eEEEEeCCC
Confidence 577888876
No 323
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=43.68 E-value=52 Score=28.97 Aligned_cols=59 Identities=10% Similarity=0.187 Sum_probs=37.5
Q ss_pred CcCCCceeeeeeCCCcEEEEecCc-------------EEEEEEcCCCceeEEe--eecCCCCCceeECCCCC-EEEE
Q 032726 50 CVSHPEDVSVVVRKGALYTATNDG-------------WVKYFILHNETLVNWK--HIDSQSLLGLTTTKEGD-VVIC 110 (135)
Q Consensus 50 ~~~GPEdi~avd~~G~lYTg~~dG-------------~I~ri~~~~~~~~~~~--~t~GRPpLGl~fd~~G~-LiVa 110 (135)
.+..|.-+ +||++|+||-+...+ .++-+.+..+....|. +.+.-. -|+.|.++|+ |||.
T Consensus 474 ~f~~PDNL-~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~-TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 474 MFNSPDGL-GFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEV-TGISFSPDQKTLFVG 548 (592)
T ss_dssp CCCCEEEE-EECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEE-EEEEECTTSSEEEEE
T ss_pred CccCCcce-EECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccC-cCeeECCCCCEEEEE
Confidence 46789999 699999999987643 3444444334444332 222333 5788998874 7765
No 324
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=42.15 E-value=1.3e+02 Score=26.39 Aligned_cols=70 Identities=10% Similarity=0.008 Sum_probs=44.7
Q ss_pred CCCceeeeeeC--CCcEEEEec-------CcEEEEEEcCCCceeEEee-------ecCCCCC--ceeECC--CCCEEEEe
Q 032726 52 SHPEDVSVVVR--KGALYTATN-------DGWVKYFILHNETLVNWKH-------IDSQSLL--GLTTTK--EGDVVICD 111 (135)
Q Consensus 52 ~GPEdi~avd~--~G~lYTg~~-------dG~I~ri~~~~~~~~~~~~-------t~GRPpL--Gl~fd~--~G~LiVaD 111 (135)
.+-.++ ++|+ .+.+|.++. .+.|+|-+....+|+.... ..||. . .|++++ .+.+|+..
T Consensus 75 ~~~~~i-a~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~-~~~~l~v~p~~~~~v~a~~ 152 (763)
T 3a0f_A 75 LGTESI-ALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRN-GGERLAVNPHWTDELWFGS 152 (763)
T ss_dssp CSEEEE-ECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTT-SBCCEEECTTSTTCEEEEC
T ss_pred cceeEE-EECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCCcccCccccCcc-ccceEEECCCCCCEEEEEe
Confidence 456788 6885 368999874 5888887532235665432 13554 3 477774 46788877
Q ss_pred CCCceEEeCCCC
Q 032726 112 SKKVRQHTNSQA 123 (135)
Q Consensus 112 a~~GLl~V~~~G 123 (135)
...||++-+..|
T Consensus 153 ~~~~l~~S~DgG 164 (763)
T 3a0f_A 153 RTQGLWRSTDRA 164 (763)
T ss_dssp SSSCEEEESSTT
T ss_pred CCCcEEEECCCC
Confidence 667888766544
No 325
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=40.62 E-value=1.3e+02 Score=25.38 Aligned_cols=53 Identities=11% Similarity=0.150 Sum_probs=30.9
Q ss_pred eeeeeeCCCc-E-EEEecCc----EEEEEEcCCCceeEEeeecCCCCCceeECCCCC-EEEE
Q 032726 56 DVSVVVRKGA-L-YTATNDG----WVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD-VVIC 110 (135)
Q Consensus 56 di~avd~~G~-l-YTg~~dG----~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~-LiVa 110 (135)
++ .+.+||+ + |+...+| .|+.++..++..........+. -+++|.+||+ |+.+
T Consensus 129 ~~-~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~-~~~~wspDg~~l~~~ 188 (710)
T 2xdw_A 129 GY-AFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKF-SCMAWTHDGKGMFYN 188 (710)
T ss_dssp EE-EECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECS-CCEEECTTSSEEEEE
T ss_pred EE-EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCccc-ceEEEEeCCCEEEEE
Confidence 45 4778885 3 4555455 6777776555443322233334 6789998886 4443
No 326
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=37.72 E-value=41 Score=28.21 Aligned_cols=62 Identities=6% Similarity=-0.130 Sum_probs=32.2
Q ss_pred eeeeeeCCCcEEEEecCcEEEEEEcCCCc-eeEEeeecCCCCCceeECCCCC---EEEEeCCCceEEeC
Q 032726 56 DVSVVVRKGALYTATNDGWVKYFILHNET-LVNWKHIDSQSLLGLTTTKEGD---VVICDSKKVRQHTN 120 (135)
Q Consensus 56 di~avd~~G~lYTg~~dG~I~ri~~~~~~-~~~~~~t~GRPpLGl~fd~~G~---LiVaDa~~GLl~V~ 120 (135)
++ +++++|..|....+.+|+.+.. ++. ...+..-.++- ..++|+++++ ++.+-..-|+++|-
T Consensus 448 ~v-~~sp~g~~~~~~~~~~~~~~~~-~g~~~~~l~gh~~~V-~~Vafsp~~~~~~~lAsg~~~g~vrlw 513 (524)
T 2j04_B 448 KW-DYSIKDDKYRIDSSYEVYPLTV-NDVSKAKIDAHGINI-TCTKWNETSAGGKCYAFSNSAGLLTLE 513 (524)
T ss_dssp EC-BCCSSSCEEEECCCCCCCC--------------CCCSC-CCEEECCSTTTTTEEEEECTTSEEEEE
T ss_pred Ee-ccCCCCCeEEccCCceeccccc-CCcceeeecCCCceE-EEEECCCCCCccHHHHhhccCceEEEE
Confidence 45 4666776665544444332221 111 12222223444 7999998864 77777777888875
No 327
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=37.17 E-value=1.3e+02 Score=23.61 Aligned_cols=66 Identities=9% Similarity=0.057 Sum_probs=34.6
Q ss_pred eCCCcEEEEecCcEEEEEEcCCCceeEEeeecCCCCC--ceeECCCCCEEEEe------CCCceEEeCCCCeEEEE
Q 032726 61 VRKGALYTATNDGWVKYFILHNETLVNWKHIDSQSLL--GLTTTKEGDVVICD------SKKVRQHTNSQALIIVC 128 (135)
Q Consensus 61 d~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpL--Gl~fd~~G~LiVaD------a~~GLl~V~~~G~v~vl 128 (135)
+.+..+..-++.||++|+...+ -.+.-....|.| + ++.+.++..++-+. ...-|+.++.+|.+..+
T Consensus 56 ~~~~~ll~~T~~G~~~~~~~~~-ip~~~r~~~G~~-i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~ 129 (312)
T 1suu_A 56 NTHDYLFMISNEGKLYLINAYE-IKDSSRASKGQN-ISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARF 129 (312)
T ss_dssp ETTCEEEEEETTSEEEEEEGGG-SCC-------CB-GGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEE
T ss_pred CCCCEEEEEECCCeEEEEEHHH-CCCCCccCCCcC-hhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEE
Confidence 3556899999999999996521 111101224555 4 55666555543331 22236666666665544
No 328
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=37.10 E-value=95 Score=20.97 Aligned_cols=48 Identities=8% Similarity=0.063 Sum_probs=26.8
Q ss_pred eCCCcEEEEe-cCcEEEEEEcCCCceeEE-eeec--CCCCCceeECCCCCEEEEeC
Q 032726 61 VRKGALYTAT-NDGWVKYFILHNETLVNW-KHID--SQSLLGLTTTKEGDVVICDS 112 (135)
Q Consensus 61 d~~G~lYTg~-~dG~I~ri~~~~~~~~~~-~~t~--GRPpLGl~fd~~G~LiVaDa 112 (135)
.++|....+. .||..+-++. +...| +++. +.. --+.+..+|||++-|.
T Consensus 27 S~~g~~~L~~~~dgnlvly~~---~~~vW~sn~~~~~~~-~~l~l~~dGNLVl~d~ 78 (119)
T 1b2p_A 27 FGTHVYRFIMQTDCNLVLYDN---NNPIWATNTGGLGNG-CRAVLQPDGVLVVITN 78 (119)
T ss_dssp ETTEEEEEEECTTSCEEEEET---TEEEEECCCTTSCSS-CEEEECTTSCEEEECT
T ss_pred CCCCCEEEEEecCCCEEEEEC---CEEEEeCCCccCCCc-eEEEEccCCEEEEEeC
Confidence 4455444443 3666655532 23334 2333 223 4578889999999885
No 329
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=35.65 E-value=77 Score=28.06 Aligned_cols=59 Identities=14% Similarity=0.081 Sum_probs=35.4
Q ss_pred ceeeeeeCCCc-EEEEecCcEEEEEEcCCCceeEEeeec---CCCCCceeECCCCCEEEEeCCCc
Q 032726 55 EDVSVVVRKGA-LYTATNDGWVKYFILHNETLVNWKHID---SQSLLGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 55 Edi~avd~~G~-lYTg~~dG~I~ri~~~~~~~~~~~~t~---GRPpLGl~fd~~G~LiVaDa~~G 115 (135)
.++ ++.++|. +-+++.||.|.-|+. ++....+.+.. +|....++|+++|++++.-..-|
T Consensus 89 ~~v-awSPdG~~LAs~s~dg~V~iwd~-~~~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DG 151 (588)
T 2j04_A 89 RVC-KPSPIDDWMAVLSNNGNVSVFKD-NKMLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDG 151 (588)
T ss_dssp EEE-EECSSSSCEEEEETTSCEEEEET-TEEEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTS
T ss_pred EEE-EECCCCCEEEEEeCCCcEEEEeC-CceeeeccCCCccccccEEEEEEcCCCCEEEEEcCCC
Confidence 355 4668885 999999999888863 33223222111 11136788888887555444444
No 330
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=35.63 E-value=47 Score=29.45 Aligned_cols=29 Identities=14% Similarity=0.071 Sum_probs=21.5
Q ss_pred ceeeeeeCCC-----cEEEEecCcEEEEEEcCCC
Q 032726 55 EDVSVVVRKG-----ALYTATNDGWVKYFILHNE 83 (135)
Q Consensus 55 Edi~avd~~G-----~lYTg~~dG~I~ri~~~~~ 83 (135)
-+++++|.++ .+|.|...|.|||++..+.
T Consensus 252 s~~~~~D~d~Dg~~D~~YaGDl~GnlWRfDl~~~ 285 (570)
T 3hx6_A 252 SSPRLADNNSDGVADYAYAGDLQGNLWRFDLIAG 285 (570)
T ss_dssp EEEEEECTTSSSBCCEEEEEETTSEEEEEECSCS
T ss_pred ccceEEecCCCCceeEEEEEeCCCcEEEEEcCCC
Confidence 3454566543 5999999999999987443
No 331
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=35.05 E-value=1.1e+02 Score=24.00 Aligned_cols=62 Identities=13% Similarity=0.133 Sum_probs=31.9
Q ss_pred cEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC---EEEEeCCCceEEeCCCCeEEEEE
Q 032726 65 ALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD---VVICDSKKVRQHTNSQALIIVCV 129 (135)
Q Consensus 65 ~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~---LiVaDa~~GLl~V~~~G~v~vl~ 129 (135)
.+.+-+++|+|.|+...+-..+ +.+||-.-++.+..+.. +++|+...=|+-.+..|++..+.
T Consensus 5 ~~v~~T~~G~iKr~~~~~~~~~---~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~ 69 (307)
T 1zi0_A 5 VVVTLSHQGYVKYQPLSEYEAQ---RRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMK 69 (307)
T ss_dssp EEEEEETTSEEEEEECC-----------------------CCEEEEEEEETTCEEEEEETTSEEEEEE
T ss_pred EEEEEeCCCEEEEeeHHHhhhh---ccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEE
Confidence 4678899999999965221211 22343334666544333 45688888888888888876654
No 332
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=34.73 E-value=1e+02 Score=20.55 Aligned_cols=17 Identities=18% Similarity=0.274 Sum_probs=13.9
Q ss_pred CceeECCCCCEEEEeCC
Q 032726 97 LGLTTTKEGDVVICDSK 113 (135)
Q Consensus 97 LGl~fd~~G~LiVaDa~ 113 (135)
.-+.+..+|||++-|..
T Consensus 59 ~~l~l~~dGNLVl~d~~ 75 (113)
T 3mez_B 59 CFMRLGHSGELDITDDR 75 (113)
T ss_dssp CEEEECTTSCEEEECTT
T ss_pred EEEEEeCCCcEEEECCC
Confidence 45788899999999863
No 333
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=34.33 E-value=62 Score=26.53 Aligned_cols=63 Identities=10% Similarity=0.057 Sum_probs=34.9
Q ss_pred CCcEEEEecCcEEEEEEcCCCceeEEeeecCCCCCceeECCCCC---EEEEeCCCceEEeCCCCeEEEE
Q 032726 63 KGALYTATNDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKEGD---VVICDSKKVRQHTNSQALIIVC 128 (135)
Q Consensus 63 ~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G~---LiVaDa~~GLl~V~~~G~v~vl 128 (135)
+-.+.+-+++|+|.|....+-..+ +.+||..-++.+..+.. +++|+...=|+-++..|++-.+
T Consensus 7 e~~~v~lT~~GyIKr~~l~~y~~~---~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~ 72 (370)
T 3l6v_A 7 EDVVVTLSHAGYAKRQPVSAYRAQ---RRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWL 72 (370)
T ss_dssp CCEEEEEESSCEEEEEEHHHHHHT---CCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEeCCCEEEEeeHHHhhhh---ccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEE
Confidence 347889999999999854111101 22344323455543332 3556665556666666665544
No 334
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=33.39 E-value=1.5e+02 Score=24.41 Aligned_cols=46 Identities=7% Similarity=0.016 Sum_probs=28.3
Q ss_pred cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCc-eeECCCCCEEEEe
Q 032726 65 ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLG-LTTTKEGDVVICD 111 (135)
Q Consensus 65 ~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLG-l~fd~~G~LiVaD 111 (135)
.+-+|..||.|.-|+...++. ..+..-...+ .- ++|+++|+.++.=
T Consensus 297 ~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~v-vs~vafSPDG~~LaSG 344 (356)
T 2w18_A 297 CAAAILTSGTIAIWDLLLGQCTALLPPVSDQH-WSFVKWSGTDSHLLAG 344 (356)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEECCC--CC-CCEEEECSSSSEEEEE
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEecCCCCCe-EEEEEECCCCCEEEEE
Confidence 367788899998887755543 2232111223 54 7899999876543
No 335
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=32.98 E-value=48 Score=22.03 Aligned_cols=19 Identities=21% Similarity=0.317 Sum_probs=15.6
Q ss_pred CceeECCCCCEEEEeCCCc
Q 032726 97 LGLTTTKEGDVVICDSKKV 115 (135)
Q Consensus 97 LGl~fd~~G~LiVaDa~~G 115 (135)
.-+.+..+|||++-|....
T Consensus 53 ~~L~l~~dGnLvL~d~~~~ 71 (105)
T 4h3o_A 53 CSAVLQSDGNFVVYDSSGR 71 (105)
T ss_dssp CEEEECTTSCEEEECTTCC
T ss_pred EEEEEeCCccEEEECCCcE
Confidence 5688999999999987643
No 336
>4ftd_A Uncharacterized protein; 6-bladed-beta-propeller, immunoglobulin-like, carbohydrate metabolism, structural genomics; 1.91A {Bacteroides eggerthii}
Probab=32.38 E-value=1.1e+02 Score=26.45 Aligned_cols=55 Identities=9% Similarity=0.192 Sum_probs=34.5
Q ss_pred eeeeeeCCCcEEEEecCc------EEEEEEcCCCceeEEee--------ec---CCCCCceeECCCCCE-EEEeC
Q 032726 56 DVSVVVRKGALYTATNDG------WVKYFILHNETLVNWKH--------ID---SQSLLGLTTTKEGDV-VICDS 112 (135)
Q Consensus 56 di~avd~~G~lYTg~~dG------~I~ri~~~~~~~~~~~~--------t~---GRPpLGl~fd~~G~L-iVaDa 112 (135)
.+ ..+.+|.||++.-.| +|+||..++...|.+.. ++ |+= +.+.-|.+||= |++..
T Consensus 193 ~m-~a~~~G~Iy~anLsg~~gs~fkIYrW~~~ts~Pe~i~s~~v~~~~gTg~R~Gd~-isv~GD~~gNa~I~~~~ 265 (453)
T 4ftd_A 193 NM-GALINGHVYLSSLSGGKVSPFKIYYWETPTSNPEVIANINVGNIPGAGNRHGDN-ASYNIDENGNGFIFFGD 265 (453)
T ss_dssp EE-EEEETTEEEEEEEBCSTTSCEEEEEESSTTSCCEEEEEECGGGSTTCCSCBCSC-CEEEECTTSCEEEEEEB
T ss_pred EE-EEecCCCEEEEeccCCCCCceEEEEeCCCCCCceeEEEeccccCCcccccccce-EEEEEcCCCCEEEEECC
Confidence 45 467899999997666 79999765555555431 22 444 55666777763 33443
No 337
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=32.02 E-value=1.5e+02 Score=22.68 Aligned_cols=64 Identities=14% Similarity=0.035 Sum_probs=40.1
Q ss_pred eCCCcEEEEecCcEEEEEEcCCCceeEEeeecCCCCC--ceeECCCCCEEEE---eCCCceEEeCCCCeEEEE
Q 032726 61 VRKGALYTATNDGWVKYFILHNETLVNWKHIDSQSLL--GLTTTKEGDVVIC---DSKKVRQHTNSQALIIVC 128 (135)
Q Consensus 61 d~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRPpL--Gl~fd~~G~LiVa---Da~~GLl~V~~~G~v~vl 128 (135)
+....+..-++.|+++|+... ..... ..-|+| + +|.++++..++-+ +...-|+.++.+|.+...
T Consensus 42 ~t~~~ll~~T~~Gr~~~~~~~--elp~~-r~~G~~-i~~~i~L~~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~ 110 (256)
T 1zvt_A 42 KSNQPVVFVDSTGRSYAIDPI--TLPSA-RGQGEP-LTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVC 110 (256)
T ss_dssp ETTSCEEEEETTSEEEEECGG--GSCCS-SSCCEE-GGGTCCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEEHH--HCCCc-CCCCeE-eeeeecCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEe
Confidence 345689999999999999542 12111 235776 4 5566655555433 333348888888877654
No 338
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=30.02 E-value=1.6e+02 Score=24.26 Aligned_cols=45 Identities=20% Similarity=0.170 Sum_probs=26.4
Q ss_pred cEEEEecCcEEEEEEcCCCce-eEEeeecCCCCCce---eECCCCCEEEE
Q 032726 65 ALYTATNDGWVKYFILHNETL-VNWKHIDSQSLLGL---TTTKEGDVVIC 110 (135)
Q Consensus 65 ~lYTg~~dG~I~ri~~~~~~~-~~~~~t~GRPpLGl---~fd~~G~LiVa 110 (135)
.+-+|..|+.|.-|+..++.. ..+. .++....++ +|.++|.++++
T Consensus 195 ~LaSgS~D~TIkIWDl~TGk~l~tL~-g~~~~v~~v~~vafSpdG~~lvs 243 (356)
T 2w18_A 195 ALLGTTIMNNIVIWNLKTGQLLKKMH-IDDSYQASVCHKAYSEMGLLFIV 243 (356)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEE-CCC---CCCEEEEEEETTEEEEE
T ss_pred eEEEecCCCcEEEEECCCCcEEEEEc-CCCcceeeeEEEEECCCCCEEEE
Confidence 566789999998888755543 3332 111111334 68888877653
No 339
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=28.87 E-value=2.2e+02 Score=23.94 Aligned_cols=72 Identities=8% Similarity=0.018 Sum_probs=39.7
Q ss_pred ceeeeeeCCCc-EEEEecCcE-------------EEEEEcCCCce--eE-Eeeec--CCCCCceeECCCCCEEEEeCCC-
Q 032726 55 EDVSVVVRKGA-LYTATNDGW-------------VKYFILHNETL--VN-WKHID--SQSLLGLTTTKEGDVVICDSKK- 114 (135)
Q Consensus 55 Edi~avd~~G~-lYTg~~dG~-------------I~ri~~~~~~~--~~-~~~t~--GRPpLGl~fd~~G~LiVaDa~~- 114 (135)
.++ ++.+||+ +|.+..|.. |++++...+.. +. +.... +.- .+.+++++|+.++.-+..
T Consensus 171 ~~~-~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~-~~~~~SpDG~~l~~~~~~~ 248 (695)
T 2bkl_A 171 ATP-KWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTF-LQSDLSRDGKYLFVYILRG 248 (695)
T ss_dssp CCC-EECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCE-EEEEECTTSCCEEEEEEET
T ss_pred cce-EEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEE-EEEEECCCCCEEEEEEeCC
Confidence 467 5778884 777766654 88887643332 12 22111 233 578888998754443322
Q ss_pred ----ceEEeCC-CCeEEEE
Q 032726 115 ----VRQHTNS-QALIIVC 128 (135)
Q Consensus 115 ----GLl~V~~-~G~v~vl 128 (135)
-++.++. +|..+.|
T Consensus 249 ~~~~~l~~~~~~~~~~~~l 267 (695)
T 2bkl_A 249 WSENDVYWKRPGEKDFRLL 267 (695)
T ss_dssp TTEEEEEEECTTCSSCEEE
T ss_pred CCceEEEEEcCCCCceEEe
Confidence 3555554 4555544
No 340
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=28.44 E-value=1.3e+02 Score=19.78 Aligned_cols=17 Identities=18% Similarity=0.491 Sum_probs=13.6
Q ss_pred CceeECCCCCEEEEeCC
Q 032726 97 LGLTTTKEGDVVICDSK 113 (135)
Q Consensus 97 LGl~fd~~G~LiVaDa~ 113 (135)
.-+.+..+|||++-|..
T Consensus 52 ~~l~l~~dGNLvl~~~~ 68 (109)
T 3dzw_A 52 CHLSMQSDGNLVVYSPR 68 (109)
T ss_dssp CEEEECTTSCEEEECTT
T ss_pred EEEEEeCCCCEEEECCC
Confidence 45788899999998853
No 341
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens}
Probab=27.43 E-value=61 Score=28.48 Aligned_cols=22 Identities=9% Similarity=-0.037 Sum_probs=18.2
Q ss_pred CCCceEEeCCCCeEEEEEEEee
Q 032726 112 SKKVRQHTNSQALIIVCVCVYS 133 (135)
Q Consensus 112 a~~GLl~V~~~G~v~vl~~~~~ 133 (135)
|-+.|+.++++|.+..+|+-.+
T Consensus 144 Ap~~lf~l~~~g~L~PlAIqL~ 165 (541)
T 3d3l_A 144 APLVMLKMEPNGKLQPMVIQIQ 165 (541)
T ss_dssp CCEEEEEECTTSCEEEEEEESS
T ss_pred cceEEEEECCCCCEeEEEEEee
Confidence 5667899999999999997654
No 342
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=25.15 E-value=75 Score=27.77 Aligned_cols=63 Identities=11% Similarity=0.027 Sum_probs=37.3
Q ss_pred eee--CCCcEEEEecCcEEEEEEcCCCceeEEeeecCCC--CCceeECC--CCCEEEEeCCCceEEeCCCC
Q 032726 59 VVV--RKGALYTATNDGWVKYFILHNETLVNWKHIDSQS--LLGLTTTK--EGDVVICDSKKVRQHTNSQA 123 (135)
Q Consensus 59 avd--~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~GRP--pLGl~fd~--~G~LiVaDa~~GLl~V~~~G 123 (135)
.+| .++.+|.+. +|.|++-.....+|+.... .+-| .--|..++ +|+||++-...+|++-+..|
T Consensus 571 ~~~~~~~~~~~a~~-~g~v~~S~DgG~tW~~~~~-~~~p~~~~~i~~~~~~~g~l~~~~~~g~l~~S~D~G 639 (737)
T 2cn3_A 571 ASDRVNGKKFYAFY-NGKFYISTDGGLTFTDTKA-PQLPKSVNKIKAVPGKEGHVWLAAREGGLWRSTDGG 639 (737)
T ss_dssp EECSSCTTCEEEEE-TTEEEEESSTTSBCEECCC-SSCCSCCSEEEEETTEEEEEEEECBTTCEEEESSTT
T ss_pred EEEecCCCEEEEec-CCEEEEECCCCcCcccccC-CCCCCccceEEEEeCCCCEEEEEeCCCcEEEEeCCC
Confidence 355 357899887 9999987432234554321 1212 02444443 67898887777787766544
No 343
>3dmo_A Cytidine deaminase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.60A {Burkholderia pseudomallei}
Probab=24.83 E-value=42 Score=24.27 Aligned_cols=13 Identities=23% Similarity=0.580 Sum_probs=10.9
Q ss_pred eeeCCCcEEEEec
Q 032726 59 VVVRKGALYTATN 71 (135)
Q Consensus 59 avd~~G~lYTg~~ 71 (135)
+.+.||++|||.+
T Consensus 38 ll~~dG~iytG~N 50 (138)
T 3dmo_A 38 LVTNDGKVFHGCN 50 (138)
T ss_dssp EEETTSCEEEEEC
T ss_pred EEeCCCCEEEEEe
Confidence 4678999999975
No 344
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=24.79 E-value=1.5e+02 Score=19.51 Aligned_cols=15 Identities=40% Similarity=0.587 Sum_probs=11.1
Q ss_pred CceeECCCCCEEEEe
Q 032726 97 LGLTTTKEGDVVICD 111 (135)
Q Consensus 97 LGl~fd~~G~LiVaD 111 (135)
--+.+..+|||++-|
T Consensus 53 ~~l~l~~~GnLvl~d 67 (115)
T 2dpf_A 53 CRLTLLSDGNLVIYD 67 (115)
T ss_dssp CEEEECTTSCEEEEC
T ss_pred eEEEECCCCcEEEEC
Confidence 356777888888876
No 345
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=24.39 E-value=1.2e+02 Score=24.96 Aligned_cols=52 Identities=15% Similarity=0.171 Sum_probs=31.1
Q ss_pred eeeeeeCCCcEEEEecCcEEEEEEcCCCce---eEE------e-e--ecCCCCCceeECCCCCEEEE
Q 032726 56 DVSVVVRKGALYTATNDGWVKYFILHNETL---VNW------K-H--IDSQSLLGLTTTKEGDVVIC 110 (135)
Q Consensus 56 di~avd~~G~lYTg~~dG~I~ri~~~~~~~---~~~------~-~--t~GRPpLGl~fd~~G~LiVa 110 (135)
++ +..++| ++.|..||.|..+.++.+.. ..+ . + -..++ ..+.+..+++.+|+
T Consensus 167 ~v-~WSpkG-~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V-~sI~wl~~~~flv~ 230 (388)
T 1xip_A 167 SF-DVTNSQ-LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSP-LSVTILSPQDFLAV 230 (388)
T ss_dssp EE-EECSSE-EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEE-EEEEESSSSEEEEE
T ss_pred EE-EEcCCc-eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeE-EEEEEecCCeEEEE
Confidence 55 456777 77888888888776643332 122 0 0 12445 77777777766553
No 346
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=24.28 E-value=2.3e+02 Score=21.91 Aligned_cols=47 Identities=2% Similarity=-0.152 Sum_probs=30.4
Q ss_pred cEEEEEEcCCCceeEEeeecCCCCCceeECCCC-CEEEEe----CCCceEEeCCCCe
Q 032726 73 GWVKYFILHNETLVNWKHIDSQSLLGLTTTKEG-DVVICD----SKKVRQHTNSQAL 124 (135)
Q Consensus 73 G~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~G-~LiVaD----a~~GLl~V~~~G~ 124 (135)
+.|+|++.+.+..+.+.. + .|..+..+| .||.+| ...-|.+++.+|.
T Consensus 88 ~~Iy~i~~dg~~~~~l~~--~---~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs 139 (302)
T 3s25_A 88 NSLCRIKRNGHGSTVLDP--D---PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGE 139 (302)
T ss_dssp EEEEEEETTSCCCEEEEC--S---CEEEEEEETTEEEEEEESSSSCEEEEEEETTSC
T ss_pred CeEEEEeCCCCcceEeec--C---CccEEEEeCCEEEEEeecCCCCceEEEEECCCC
Confidence 589999874443343332 2 366777655 578787 5667888888763
No 347
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=23.73 E-value=99 Score=24.61 Aligned_cols=61 Identities=21% Similarity=0.242 Sum_probs=33.2
Q ss_pred CCcEEEEecCcEEEEEEcCCCceeEEeeec-CCCCCceeECCCCCEEE---EeCCCceEEeCCCCeEEEE
Q 032726 63 KGALYTATNDGWVKYFILHNETLVNWKHID-SQSLLGLTTTKEGDVVI---CDSKKVRQHTNSQALIIVC 128 (135)
Q Consensus 63 ~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~-GRPpLGl~fd~~G~LiV---aDa~~GLl~V~~~G~v~vl 128 (135)
+..+.+.+++|+|.|....+ |.... ++-...+.+..+++|+- ++...=++-++.+|.+...
T Consensus 106 ~~~ll~~T~~G~iKrt~l~e-----~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l~T~~G~~irf 170 (323)
T 1wp5_A 106 NGYFLFVTRNGMVKKTELKH-----YKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLVTHNGYALWF 170 (323)
T ss_dssp SCEEEEEETTSEEEEEEGGG-----GCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEEETTSEEEEE
T ss_pred CceEEEEeCCCeEEEeEHHH-----hhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEEEeCCCcEEEE
Confidence 34699999999999996521 11111 21112344444455543 3333446666667766543
No 348
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=23.38 E-value=3e+02 Score=23.30 Aligned_cols=51 Identities=12% Similarity=-0.088 Sum_probs=30.8
Q ss_pred eeeCCCcEEEEecCcEEEEEEcCCCceeEEeeec-------------------CCCCCceeECCCCCEEEE
Q 032726 59 VVVRKGALYTATNDGWVKYFILHNETLVNWKHID-------------------SQSLLGLTTTKEGDVVIC 110 (135)
Q Consensus 59 avd~~G~lYTg~~dG~I~ri~~~~~~~~~~~~t~-------------------GRPpLGl~fd~~G~LiVa 110 (135)
++.+||+...-+.|+.|+.++..++....+...+ |+- -+++|.+||+.++.
T Consensus 118 ~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~-~~~~wSpDg~~la~ 187 (740)
T 4a5s_A 118 TWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY-SALWWSPNGTFLAY 187 (740)
T ss_dssp EECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS-BCEEECTTSSEEEE
T ss_pred EECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCC-cceEECCCCCEEEE
Confidence 6789996445557888888765443333222111 333 46889999985543
No 349
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=23.22 E-value=2.2e+02 Score=25.48 Aligned_cols=67 Identities=6% Similarity=0.018 Sum_probs=42.2
Q ss_pred ceeeeeeC-C-CcEEEEec------CcEEEEEEcCCCceeEEeeecCCCCCceeECCC--CCEEEEeCCCceEEeCCCC
Q 032726 55 EDVSVVVR-K-GALYTATN------DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKE--GDVVICDSKKVRQHTNSQA 123 (135)
Q Consensus 55 Edi~avd~-~-G~lYTg~~------dG~I~ri~~~~~~~~~~~~t~GRPpLGl~fd~~--G~LiVaDa~~GLl~V~~~G 123 (135)
.+| ++|+ + +++|.+.. +|.|+|-+....+|+... ....|-..|.+++. +.||++....|+++-+..|
T Consensus 93 ~~I-avdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~-~p~~~~~~l~~~P~~~~~l~a~~~~~gly~S~DgG 169 (685)
T 3f6k_A 93 FGM-AIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTD-LPFHPLTQMMYSPQNSDYLLALSTENGLWVSKNFG 169 (685)
T ss_dssp GCE-EECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEE-CSSCBSSCCEEETTEEEEEEEEBTTCCEEEESSTT
T ss_pred eEE-EECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEecc-CCCCCceEEEEecCCCCEEEEEECCCCEEEEeCCC
Confidence 367 6875 3 36777664 789998854233566543 34444125788853 4567777788999876655
No 350
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=23.21 E-value=1.5e+02 Score=26.24 Aligned_cols=70 Identities=10% Similarity=0.017 Sum_probs=41.3
Q ss_pred CCceeeeeeCC--CcEEEEecC------cEEEEEEcCCCceeEEee-------ecCCC-CCceeECCC--CCEEEEeCCC
Q 032726 53 HPEDVSVVVRK--GALYTATND------GWVKYFILHNETLVNWKH-------IDSQS-LLGLTTTKE--GDVVICDSKK 114 (135)
Q Consensus 53 GPEdi~avd~~--G~lYTg~~d------G~I~ri~~~~~~~~~~~~-------t~GRP-pLGl~fd~~--G~LiVaDa~~ 114 (135)
+-.++ ++|+. +.+|.++.+ +.|+|-+....+|+.... .-||. ...|++++. +.+|+.....
T Consensus 65 ~i~~i-a~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~ 143 (789)
T 1sqj_A 65 GTESI-ALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTE 143 (789)
T ss_dssp SEEEE-EEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSS
T ss_pred ceeEE-EECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccC
Confidence 45578 68853 579998754 889888542234555421 12331 125777743 4566665567
Q ss_pred ceEEeCCCC
Q 032726 115 VRQHTNSQA 123 (135)
Q Consensus 115 GLl~V~~~G 123 (135)
||++-+..|
T Consensus 144 gl~~S~DgG 152 (789)
T 1sqj_A 144 GIWKSSDRA 152 (789)
T ss_dssp CEEEESSTT
T ss_pred CEEEECCCC
Confidence 888766544
No 351
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=21.66 E-value=19 Score=24.55 Aligned_cols=29 Identities=10% Similarity=0.090 Sum_probs=11.0
Q ss_pred ecCcEEEEEEcCCCceeEEeeecCCCCCce
Q 032726 70 TNDGWVKYFILHNETLVNWKHIDSQSLLGL 99 (135)
Q Consensus 70 ~~dG~I~ri~~~~~~~~~~~~t~GRPpLGl 99 (135)
.+||+|.++..=-.....+++.-|+| +.|
T Consensus 111 v~dGkI~~~r~y~D~~~l~~q~~g~~-~~~ 139 (143)
T 3dm8_A 111 FQNGRLTNLRMVLDTFDLVEQALGRP-IHL 139 (143)
T ss_dssp EETTEEEEEEEEECHHHHHHHHHTC-----
T ss_pred EECCEEEEEEEEEcHHHHHHHHhCCC-cCC
Confidence 45666666532000111124566887 665
No 352
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=21.13 E-value=1.8e+02 Score=19.05 Aligned_cols=16 Identities=38% Similarity=0.553 Sum_probs=13.0
Q ss_pred CceeECCCCCEEEEeC
Q 032726 97 LGLTTTKEGDVVICDS 112 (135)
Q Consensus 97 LGl~fd~~G~LiVaDa 112 (135)
--+.+..+|||++-|.
T Consensus 53 ~~l~l~~dGNLVl~~~ 68 (110)
T 3a0c_A 53 CRLTLHNNGNLVIYDQ 68 (110)
T ss_dssp CEEEECTTSCEEEECT
T ss_pred EEEEEeCCCCEEEECC
Confidence 3478889999999885
No 353
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=20.90 E-value=2.7e+02 Score=22.04 Aligned_cols=66 Identities=11% Similarity=0.058 Sum_probs=36.9
Q ss_pred eCCCcEEEEecCcEEEEEEcCCCceeEE-eeecCCCCCceeECCCCCEEEE---eCCCceEEeCCCCeEEEE
Q 032726 61 VRKGALYTATNDGWVKYFILHNETLVNW-KHIDSQSLLGLTTTKEGDVVIC---DSKKVRQHTNSQALIIVC 128 (135)
Q Consensus 61 d~~G~lYTg~~dG~I~ri~~~~~~~~~~-~~t~GRPpLGl~fd~~G~LiVa---Da~~GLl~V~~~G~v~vl 128 (135)
+.+..+..-++.|+++|+...+...... ....|.+ +|.++++..++-+ +...-|+.++.+|.+...
T Consensus 155 ~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~--~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt 224 (327)
T 3uc1_A 155 SAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQ--GMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRT 224 (327)
T ss_dssp CTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEE--SSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEE
T ss_pred cCCCEEEEEECCCeEEEEECcccccCcCCcCCCCee--eecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEE
Confidence 3456799999999999996531011111 1123443 4556555554322 333347777777765543
No 354
>2d30_A Cytidine deaminase; purines, pyrimidines, nucleosides, nucleotides, salvage of nucleosides and nucleotides, structural genomics; 2.40A {Bacillus anthracis} SCOP: c.97.1.1
Probab=20.48 E-value=59 Score=23.38 Aligned_cols=13 Identities=23% Similarity=0.641 Sum_probs=11.1
Q ss_pred eeeCCCcEEEEec
Q 032726 59 VVVRKGALYTATN 71 (135)
Q Consensus 59 avd~~G~lYTg~~ 71 (135)
+.+.||++|||.+
T Consensus 39 ll~~dG~i~~G~N 51 (141)
T 2d30_A 39 LLTQDGKVYRGCN 51 (141)
T ss_dssp EEETTCCEEEEEC
T ss_pred EEeCCCCEEEeec
Confidence 5678999999987
No 355
>3oj6_A Blasticidin-S deaminase; ssgcid, seattle structural genomics for infectious disease, hydrolase; 1.70A {Coccidioides immitis}
Probab=20.30 E-value=58 Score=24.08 Aligned_cols=19 Identities=11% Similarity=0.291 Sum_probs=13.5
Q ss_pred CceeeeeeCCCcEEEEecC
Q 032726 54 PEDVSVVVRKGALYTATND 72 (135)
Q Consensus 54 PEdi~avd~~G~lYTg~~d 72 (135)
+..-++.+.||++|||.+=
T Consensus 52 ~VGAAll~~dG~i~tG~NV 70 (158)
T 3oj6_A 52 SVASAAISDDGRVFSGVNV 70 (158)
T ss_dssp CEEEEEEETTSCEEEEECC
T ss_pred cEEEEEEeCCCCEEEEEcc
Confidence 3344356789999999863
No 356
>3mpz_A Cytidine deaminase; ssgcid, structu genomics, seattle structural genomics center for infectious hydrolase; 1.70A {Mycobacterium smegmatis} PDB: 3ijf_X 4f3w_A
Probab=20.15 E-value=59 Score=23.86 Aligned_cols=13 Identities=31% Similarity=0.396 Sum_probs=10.7
Q ss_pred eeeCCCcEEEEec
Q 032726 59 VVVRKGALYTATN 71 (135)
Q Consensus 59 avd~~G~lYTg~~ 71 (135)
+.+.||++|||.+
T Consensus 52 ll~~dG~i~tG~N 64 (150)
T 3mpz_A 52 ALVDDGRTVTGCN 64 (150)
T ss_dssp EEETTSCEEEEEC
T ss_pred EEeCCCCEEEEEe
Confidence 4578999999975
Done!