BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032727
(135 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LC83|RS242_ARATH 40S ribosomal protein S24-2 OS=Arabidopsis thaliana GN=RPS24B PE=2
SV=2
Length = 133
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/134 (89%), Positives = 128/134 (95%), Gaps = 1/134 (0%)
Query: 1 MADTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFV 60
MA+ KAVT+RTR FMTNRLL+RKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIF
Sbjct: 1 MAE-KAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFC 59
Query: 61 FKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKI 120
FKFRTHFGGGKS+G+GLIYD+VENAKKFEPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKI
Sbjct: 60 FKFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKI 119
Query: 121 RGVKKTKASDAAKK 134
RGVKKTKA D KK
Sbjct: 120 RGVKKTKAGDTKKK 133
>sp|Q9SS17|RS241_ARATH 40S ribosomal protein S24-1 OS=Arabidopsis thaliana GN=RPS24A PE=2
SV=1
Length = 133
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/134 (92%), Positives = 131/134 (97%), Gaps = 1/134 (0%)
Query: 1 MADTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFV 60
MA+ KAVT+RTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFV
Sbjct: 1 MAE-KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFV 59
Query: 61 FKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKI 120
FKFRTHFGGGKS+GFGLIYD+VE+AKKFEPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKI
Sbjct: 60 FKFRTHFGGGKSSGFGLIYDTVESAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKI 119
Query: 121 RGVKKTKASDAAKK 134
RGVKKTKA DA KK
Sbjct: 120 RGVKKTKAGDAKKK 133
>sp|Q962Q6|RS24_SPOFR 40S ribosomal protein S24 OS=Spodoptera frugiperda GN=RpS24 PE=2
SV=1
Length = 132
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/127 (66%), Positives = 104/127 (81%), Gaps = 1/127 (0%)
Query: 8 TLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHF 67
T+RTRKFMTNRLL+RKQ V DVLHPG+ VSK E++EKLA+MY+V P+ +FVF F+T+F
Sbjct: 7 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 65
Query: 68 GGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKKTK 127
GGGKSTGF LIYD+++ AKKFEPK+RL R+GL K +RKQ KERKNR KK+RG KK+K
Sbjct: 66 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 125
Query: 128 ASDAAKK 134
AAKK
Sbjct: 126 VGAAAKK 132
>sp|Q90YQ0|RS24_ICTPU 40S ribosomal protein S24 OS=Ictalurus punctatus GN=rps24 PE=2 SV=1
Length = 131
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/129 (64%), Positives = 101/129 (78%), Gaps = 1/129 (0%)
Query: 6 AVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRT 65
+VTLRTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY+ P+ +FVF F+T
Sbjct: 4 SVTLRTRKFMTNRLLQRKQMVLDVLHPGKATVPKTEIREKLAKMYKT-TPDVVFVFGFKT 62
Query: 66 HFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKK 125
FGGGK+TGF ++YDS++ AKK EPKYRL R+GL K + SRKQ KERKNR KK+RG KK
Sbjct: 63 QFGGGKTTGFAMVYDSLDYAKKNEPKYRLARHGLYEKKKTSRKQRKERKNRMKKVRGTKK 122
Query: 126 TKASDAAKK 134
A KK
Sbjct: 123 ASVGAAGKK 131
>sp|O42387|RS24_TAKRU 40S ribosomal protein S24 OS=Takifugu rubripes GN=rps24 PE=3 SV=1
Length = 132
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/135 (64%), Positives = 105/135 (77%), Gaps = 5/135 (3%)
Query: 1 MADTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFV 60
M DT VT+RTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY+ P+ +FV
Sbjct: 1 MNDT--VTVRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKT-TPDVVFV 57
Query: 61 FKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKI 120
F FRT FGGGK+TGF ++YDS++ AKK EPK+RL R+GL K + SRKQ KERKNR KK+
Sbjct: 58 FGFRTQFGGGKTTGFAMVYDSLDYAKKNEPKHRLARHGLFEKKKTSRKQRKERKNRMKKV 117
Query: 121 RGVKKTKASDAAKKK 135
RG K KAS A KK
Sbjct: 118 RGTK--KASVGASKK 130
>sp|Q9W6X9|RS24_ORYLA 40S ribosomal protein S24 OS=Oryzias latipes GN=rps24 PE=2 SV=1
Length = 132
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 101/134 (75%), Gaps = 3/134 (2%)
Query: 1 MADTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFV 60
M DT VT+RTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY+ P+ +FV
Sbjct: 1 MNDT--VTIRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKT-TPDVVFV 57
Query: 61 FKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKI 120
F FRT FGGGK+TGF ++YDS++ AKK EPK+RL +GL K + SRKQ ER+NR KK+
Sbjct: 58 FGFRTQFGGGKTTGFAMVYDSLDYAKKNEPKHRLATHGLYEKKKTSRKQRTERQNRMKKV 117
Query: 121 RGVKKTKASDAAKK 134
R +KK A KK
Sbjct: 118 RSIKKASVGAAGKK 131
>sp|Q75K27|RS24_DICDI 40S ribosomal protein S24 OS=Dictyostelium discoideum GN=rps24 PE=3
SV=1
Length = 126
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 95/114 (83%)
Query: 3 DTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFK 62
D AV +RTRK +TNRLLSRKQFV++V+HPG+ANVSK +LK +A++++V DP IF+F
Sbjct: 2 DKAAVVVRTRKVLTNRLLSRKQFVVEVVHPGKANVSKKDLKTTIAKLHKVADPETIFLFG 61
Query: 63 FRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNR 116
F+T FGGGKSTGFGLIYD++E AKK+EPKYRL R GL TK + SRKQ KE+KNR
Sbjct: 62 FKTDFGGGKSTGFGLIYDNLEIAKKYEPKYRLARAGLYTKPQTSRKQRKEKKNR 115
>sp|O59865|RS24B_SCHPO 40S ribosomal protein S24-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps24b PE=2 SV=3
Length = 134
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 101/133 (75%), Gaps = 2/133 (1%)
Query: 4 TKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKF 63
++AVT+RTRKFMTNRLL RKQ V+D+LHPG+AN+SK E++EKLA+MY+ D + F
Sbjct: 2 SEAVTIRTRKFMTNRLLQRKQMVVDILHPGKANLSKNEIREKLAQMYKT-DSECVQAFGL 60
Query: 64 RTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEK-SRKQLKERKNRAKKIRG 122
RTHFGGG+STGF LIYDS E+ KKFEP YRL+R G ++K +R+Q K+RKNR KK+ G
Sbjct: 61 RTHFGGGRSTGFALIYDSTESMKKFEPHYRLVRVGQAEPIQKVARQQRKQRKNRGKKVFG 120
Query: 123 VKKTKASDAAKKK 135
K A +K++
Sbjct: 121 TGKRLAKRKSKQQ 133
>sp|P0CX32|RS24B_YEAST 40S ribosomal protein S24-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS24B PE=1 SV=1
Length = 135
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 104/135 (77%), Gaps = 4/135 (2%)
Query: 1 MADTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFV 60
M+D AVT+RTRK ++N LL+RKQFV+DVLHP RANVSK EL+EKLA +Y+ + +A+ V
Sbjct: 1 MSD--AVTIRTRKVISNPLLARKQFVVDVLHPNRANVSKDELREKLAEVYKA-EKDAVSV 57
Query: 61 FKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEK-SRKQLKERKNRAKK 119
F FRT FGGGKS GFGL+Y+SV AKKFEP YRL+R GL KVEK SR+Q K++KNR KK
Sbjct: 58 FGFRTQFGGGKSVGFGLVYNSVAEAKKFEPTYRLVRYGLAEKVEKASRQQRKQKKNRDKK 117
Query: 120 IRGVKKTKASDAAKK 134
I G K A A++
Sbjct: 118 IFGTGKRLAKKVARR 132
>sp|P0CX31|RS24A_YEAST 40S ribosomal protein S24-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS24A PE=1 SV=1
Length = 135
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 104/135 (77%), Gaps = 4/135 (2%)
Query: 1 MADTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFV 60
M+D AVT+RTRK ++N LL+RKQFV+DVLHP RANVSK EL+EKLA +Y+ + +A+ V
Sbjct: 1 MSD--AVTIRTRKVISNPLLARKQFVVDVLHPNRANVSKDELREKLAEVYKA-EKDAVSV 57
Query: 61 FKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEK-SRKQLKERKNRAKK 119
F FRT FGGGKS GFGL+Y+SV AKKFEP YRL+R GL KVEK SR+Q K++KNR KK
Sbjct: 58 FGFRTQFGGGKSVGFGLVYNSVAEAKKFEPTYRLVRYGLAEKVEKASRQQRKQKKNRDKK 117
Query: 120 IRGVKKTKASDAAKK 134
I G K A A++
Sbjct: 118 IFGTGKRLAKKVARR 132
>sp|O13784|RS24A_SCHPO 40S ribosomal protein S24-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps24a PE=3 SV=3
Length = 134
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 101/133 (75%), Gaps = 2/133 (1%)
Query: 4 TKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKF 63
++AVT+RTRKFMTNRLL RKQ V+D+LHPG+AN+SK +L+EKL +MY+ D +A+ F
Sbjct: 2 SEAVTIRTRKFMTNRLLQRKQMVVDILHPGKANISKNDLREKLGQMYKT-DASAVQAFGL 60
Query: 64 RTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEK-SRKQLKERKNRAKKIRG 122
RTH+GGG++TGF LIYD VE KKFEP YRL+R G ++K +R+Q K+RKNR KK+ G
Sbjct: 61 RTHYGGGRTTGFALIYDDVEAMKKFEPHYRLVRVGHAEPIQKVARQQRKQRKNRGKKVFG 120
Query: 123 VKKTKASDAAKKK 135
K A +K++
Sbjct: 121 TGKRLAKRKSKQQ 133
>sp|P14249|RS24_MUCCL 40S ribosomal protein S24 OS=Mucor circinelloides f. lusitanicus
GN=RPS24 PE=3 SV=1
Length = 148
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/122 (63%), Positives = 95/122 (77%), Gaps = 1/122 (0%)
Query: 6 AVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRT 65
AVT+RTRKF+TNRLL RKQ V+DV+HPG ANVSK EL+ K+ +MY+ D + VF F+T
Sbjct: 23 AVTIRTRKFLTNRLLQRKQMVVDVIHPGLANVSKDELRSKIGKMYKA-DKEVVSVFGFKT 81
Query: 66 HFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGVKK 125
HFGGGK+TGF LIYD+VE K FEPK+RL+R GL + RKQ KE+KNR KK RGV+K
Sbjct: 82 HFGGGKTTGFALIYDNVEALKNFEPKHRLVRIGLAEAPKGGRKQRKEKKNREKKFRGVRK 141
Query: 126 TK 127
+K
Sbjct: 142 SK 143
>sp|P62850|RS24_RAT 40S ribosomal protein S24 OS=Rattus norvegicus GN=Rps24 PE=2 SV=1
Length = 133
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/135 (63%), Positives = 101/135 (74%), Gaps = 3/135 (2%)
Query: 1 MADTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFV 60
M DT + RTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY+ P+ IFV
Sbjct: 1 MNDTVTI--RTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFV 57
Query: 61 FKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKI 120
F FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL K + SRKQ KERKNR KK+
Sbjct: 58 FGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKV 117
Query: 121 RGVKKTKASDAAKKK 135
RG K K K
Sbjct: 118 RGTAKANVGAGKKPK 132
>sp|P62849|RS24_MOUSE 40S ribosomal protein S24 OS=Mus musculus GN=Rps24 PE=1 SV=1
Length = 133
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/135 (63%), Positives = 101/135 (74%), Gaps = 3/135 (2%)
Query: 1 MADTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFV 60
M DT + RTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY+ P+ IFV
Sbjct: 1 MNDTVTI--RTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFV 57
Query: 61 FKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKI 120
F FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL K + SRKQ KERKNR KK+
Sbjct: 58 FGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKV 117
Query: 121 RGVKKTKASDAAKKK 135
RG K K K
Sbjct: 118 RGTAKANVGAGKKPK 132
>sp|P62848|RS24_MESAU 40S ribosomal protein S24 OS=Mesocricetus auratus GN=RPS24 PE=3
SV=1
Length = 133
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/135 (63%), Positives = 101/135 (74%), Gaps = 3/135 (2%)
Query: 1 MADTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFV 60
M DT + RTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY+ P+ IFV
Sbjct: 1 MNDTVTI--RTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFV 57
Query: 61 FKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKI 120
F FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL K + SRKQ KERKNR KK+
Sbjct: 58 FGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKV 117
Query: 121 RGVKKTKASDAAKKK 135
RG K K K
Sbjct: 118 RGTAKANVGAGKKPK 132
>sp|P62847|RS24_HUMAN 40S ribosomal protein S24 OS=Homo sapiens GN=RPS24 PE=1 SV=1
Length = 133
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/135 (63%), Positives = 101/135 (74%), Gaps = 3/135 (2%)
Query: 1 MADTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFV 60
M DT + RTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY+ P+ IFV
Sbjct: 1 MNDTVTI--RTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFV 57
Query: 61 FKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKI 120
F FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL K + SRKQ KERKNR KK+
Sbjct: 58 FGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKV 117
Query: 121 RGVKKTKASDAAKKK 135
RG K K K
Sbjct: 118 RGTAKANVGAGKKPK 132
>sp|Q5RAQ8|RS24_PONAB 40S ribosomal protein S24 OS=Pongo abelii GN=RPS24 PE=2 SV=1
Length = 131
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 100/137 (72%), Gaps = 9/137 (6%)
Query: 1 MADTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFV 60
M DT VT+RTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY+ P+ IFV
Sbjct: 1 MNDT--VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFV 57
Query: 61 FKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTK---VEKSRKQLKERKNRA 117
F FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL K K RK ERKNR
Sbjct: 58 FGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRK---ERKNRM 114
Query: 118 KKIRGVKKTKASDAAKK 134
KK+RG K KK
Sbjct: 115 KKVRGTAKANVGAGKKK 131
>sp|Q56JU9|RS24_BOVIN 40S ribosomal protein S24 OS=Bos taurus GN=RPS24 PE=2 SV=2
Length = 131
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 100/137 (72%), Gaps = 9/137 (6%)
Query: 1 MADTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFV 60
M DT VT+RTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY+ P+ IFV
Sbjct: 1 MNDT--VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFV 57
Query: 61 FKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTK---VEKSRKQLKERKNRA 117
F FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL K K RK ERKNR
Sbjct: 58 FGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRK---ERKNRM 114
Query: 118 KKIRGVKKTKASDAAKK 134
KK+RG K KK
Sbjct: 115 KKVRGTAKANVGAGKKK 131
>sp|P02377|RS24_XENLA 40S ribosomal protein S24 OS=Xenopus laevis GN=rps24 PE=2 SV=1
Length = 132
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/137 (62%), Positives = 100/137 (72%), Gaps = 9/137 (6%)
Query: 1 MADTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFV 60
M DT VT+RTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY+ P+ IFV
Sbjct: 1 MNDT--VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFV 57
Query: 61 FKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTK---VEKSRKQLKERKNRA 117
F FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL ++GL K K RK ERKNR
Sbjct: 58 FGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLAKHGLYEKKKTSRKQRK---ERKNRM 114
Query: 118 KKIRGVKKTKASDAAKK 134
KK+RG K KK
Sbjct: 115 KKVRGTAKANVGAGKKK 131
>sp|Q4R5H5|RS24_MACFA 40S ribosomal protein S24 OS=Macaca fascicularis GN=RPS24 PE=2 SV=1
Length = 131
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/137 (62%), Positives = 99/137 (72%), Gaps = 9/137 (6%)
Query: 1 MADTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFV 60
M DT VT+RTRKFMTNRLL RKQ VI VLHPG+A V K E++EKLA+MY+ P+ IFV
Sbjct: 1 MNDT--VTIRTRKFMTNRLLQRKQMVIGVLHPGKATVPKTEIREKLAKMYKT-TPDVIFV 57
Query: 61 FKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTK---VEKSRKQLKERKNRA 117
F FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL K K RK ERKNR
Sbjct: 58 FGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRK---ERKNRM 114
Query: 118 KKIRGVKKTKASDAAKK 134
KK+RG K KK
Sbjct: 115 KKVRGTAKANVGAGKKK 131
>sp|Q5JIY8|RS24_PYRKO 30S ribosomal protein S24e OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rps24e PE=3 SV=1
Length = 98
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N+LL RK+ DVLH G S+ +K KL M ++ DPN + R++FG S G+
Sbjct: 11 NKLLGRKEIYFDVLHEGEPTPSREAVKGKLVAMLDL-DPNTTVIQYIRSYFGSNVSKGYA 69
Query: 77 LIYDSVENAKKFEPKYRLIRNGLDTKVEK 105
Y++ E EP+Y L+R+GL K E+
Sbjct: 70 KAYETRERMLYIEPEYILVRDGLVQKQEE 98
>sp|C5A442|RS24_THEGJ 30S ribosomal protein S24e OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=rps24e PE=3 SV=1
Length = 98
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N+LL RK+ D++H G S+ +K KLA M ++ DPN + + R++FG S G+
Sbjct: 11 NKLLGRKEIYFDIIHEGEPTPSREAVKGKLAAMLDL-DPNTMVLQYIRSYFGSHVSKGYA 69
Query: 77 LIYDSVENAKKFEPKYRLIRNGLDTKVEK 105
Y++ E EP+Y L+R+GL K E+
Sbjct: 70 KAYETRERMLYIEPEYILLRDGLIQKEEE 98
>sp|Q8U442|RS24_PYRFU 30S ribosomal protein S24e OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rps24e PE=1 SV=1
Length = 99
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 7 VTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTH 66
+ +R ++ N+L+ RK+ ++ HPG S+ ++K KL M ++ +P + R++
Sbjct: 1 MEIRIKEIKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDL-NPETTVIQYIRSY 59
Query: 67 FGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVE 104
FG S G+ YDS E EP+Y LIR+GL K E
Sbjct: 60 FGSYISKGYAKAYDSKERMLYIEPEYILIRDGLIEKKE 97
>sp|B6YW35|RS24_THEON 30S ribosomal protein S24e OS=Thermococcus onnurineus (strain NA1)
GN=rps24e PE=3 SV=1
Length = 98
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N+LL RK+ DV+H G S+ ++K KL M ++ DP + +++FG S G+
Sbjct: 11 NKLLGRKEIYFDVIHEGEPTPSRKDVKGKLVAMLDL-DPETTVLQYIKSYFGSRVSKGYA 69
Query: 77 LIYDSVENAKKFEPKYRLIRNGLDTKVEK 105
Y+S E EP+Y L+R+G+ TK E+
Sbjct: 70 KAYESKERMLYIEPEYILVRDGIITKEEE 98
>sp|C6A0F5|RS24_THESM 30S ribosomal protein S24e OS=Thermococcus sibiricus (strain MM
739 / DSM 12597) GN=rps24e PE=3 SV=1
Length = 98
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N+LL RK+ +V+H G S+A++K KL M ++ +P A V R++FG S G+
Sbjct: 11 NKLLGRKEIYFEVIHEGEPTPSRADVKGKLVAMLDL-NPEATVVQYIRSYFGSHVSEGYA 69
Query: 77 LIYDSVENAKKFEPKYRLIRNGL 99
Y+S E EP+Y L R G+
Sbjct: 70 KAYESKERMLYIEPEYVLRREGI 92
>sp|P58746|RS24_PYRHO 30S ribosomal protein S24e OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps24e PE=3 SV=1
Length = 99
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N+L+ RK+ ++ HPG S+ ++K KL M ++ +P + R++FG KS G+
Sbjct: 11 NKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDL-NPETTVIQYIRSYFGSYKSKGYA 69
Query: 77 LIYDSVENAKKFEPKYRLIRNGLDTKVE 104
Y E EP+Y LIR+G+ K E
Sbjct: 70 KYYYDKERMLYIEPEYILIRDGIIEKKE 97
>sp|Q9UY20|RS24_PYRAB 30S ribosomal protein S24e OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rps24e PE=1 SV=1
Length = 99
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N+L+ RK+ ++ HPG S+ ++K KL M ++ +P + R++FG KS G+
Sbjct: 11 NKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDL-NPETTVIQYIRSYFGSYKSKGYA 69
Query: 77 LIYDSVENAKKFEPKYRLIRNGLDTKVE 104
Y + EP+Y LIR+G+ K E
Sbjct: 70 KYYYDKDRMLYIEPEYILIRDGIIEKKE 97
>sp|Q74M50|RS24_NANEQ 30S ribosomal protein S24e OS=Nanoarchaeum equitans (strain
Kin4-M) GN=rps24e PE=3 SV=1
Length = 94
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N+L R +++I V HP ++ E KEK+A M V D N + + K + +G S +
Sbjct: 12 NKLFDRTEYIIQVEHPKEKTPTREEAKEKIAEMLNV-DKNKLVIKKIVSKYGLPYSFIYA 70
Query: 77 LIYDSVENAKKFEPKYRLIRNGL 99
+YD+++ AK+ E K L RN L
Sbjct: 71 RVYDNIDTAKRVELKQILRRNNL 93
>sp|A4WKS9|RS24_PYRAR 30S ribosomal protein S24e OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=rps24e PE=3 SV=1
Length = 121
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N+LL+R++ +++V H ++ +L+E +A+ V D +++F+ K +T +G GKS
Sbjct: 14 NKLLARREVLVEVSHHKAPTPTRKDLREWVAKQLGV-DVSSVFIRKIKTEYGIGKSVAEV 72
Query: 77 LIYDSVENAKKFEPKYRLIRN 97
+Y + A+ EP Y L RN
Sbjct: 73 HVYSDSKMARIIEPLYILARN 93
>sp|Q8ZV65|RS24_PYRAE 30S ribosomal protein S24e OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rps24e PE=3 SV=1
Length = 121
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N+LL+R++ +++ +H + ++ ++E +A+ + D + +FV + +T FG G+S
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGI-DISNVFVRRIKTEFGRGRSLAEV 72
Query: 77 LIYDSVENAKKFEPKYRLIRN 97
+Y+ + A+ EP Y L RN
Sbjct: 73 HVYNDSKIARVIEPLYILARN 93
>sp|O26367|RS24_METTH 30S ribosomal protein S24e OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rps24e PE=3 SV=1
Length = 100
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N LL+RK+ + L+ G + E+K KL M + D + + V K FG ++TG+
Sbjct: 11 NPLLNRKEIRFECLYEGESTPKVLEVKNKLVAMLDA-DKDLLVVDKIDQGFGEPRATGYA 69
Query: 77 LIYDSVENAKKFEPKYRLIRN 97
IY+S E + EP++ + +N
Sbjct: 70 KIYESAEKLTEIEPEHVIKKN 90
>sp|Q18KI1|RS24_HALWD 30S ribosomal protein S24e OS=Haloquadratum walsbyi (strain DSM
16790) GN=rps24e PE=3 SV=1
Length = 105
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N +L R ++ H A S+ +++ LA KD + + V K T FG K+ G+
Sbjct: 11 NSMLHRTDIQFEIAHED-ATPSRLSVRDSLAAKIN-KDSDEVVVHKLDTKFGMRKTIGYA 68
Query: 77 LIYDSVENAKKFEPKYRLIRNGLDTKVE 104
+YDS ++A++ E Y L RN ++ + E
Sbjct: 69 KVYDSPQSARQVEQDYMLKRNKIEIESE 96
>sp|Q9YCY0|RS24_AERPE 30S ribosomal protein S24e OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rps24e
PE=3 SV=3
Length = 118
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N L+ R++ V+ + H + + L++KLA + V D I++ +T +G G S
Sbjct: 28 NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGV-DIKRIYIRYIKTGYGAGLSKVRV 86
Query: 77 LIYDSVENAKKFEPKYRLIRNG 98
+YDS E A FEPKY + RNG
Sbjct: 87 HVYDSPERALSFEPKYIIERNG 108
>sp|Q6L0P8|RS24_PICTO 30S ribosomal protein S24e OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rps24e
PE=3 SV=1
Length = 102
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N+LL RK+ + S+ ++++ LA Y D + I V K R G + G+
Sbjct: 14 NKLLFRKEINYTIKFENDKTPSREDIRKLLANNY-GSDESLIIVDKNRQETGKHEIKGYA 72
Query: 77 LIYDSVENAKKFEPKYRLIRNGLDTK 102
IYD+ E+A +EP Y L RN L K
Sbjct: 73 KIYDTKEHAMLYEPDYELFRNKLKVK 98
>sp|Q8TVD8|RS24_METKA 30S ribosomal protein S24e OS=Methanopyrus kandleri (strain AV19
/ DSM 6324 / JCM 9639 / NBRC 100938) GN=rps24e PE=3
SV=1
Length = 116
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N LL RK+ V H K+E+ KLA + +V D + + + + FG ++ G+
Sbjct: 11 NPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDV-DKEVVLIDRMESEFGKRETKGYA 69
Query: 77 LIYDSVENAKKFEPKYRLIRN 97
IY S+E+ + EP++ + R+
Sbjct: 70 KIYKSMEHLEDIEPEHMVERH 90
>sp|Q975Q9|RS24_SULTO 30S ribosomal protein S24e OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rps24e PE=3 SV=1
Length = 120
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N ++ R++ I V H G +S+ ++ + +A Y ++ + + + K T +G G S
Sbjct: 25 NNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQE-DLVVIKKIHTLYGAGISYVRA 83
Query: 77 LIYDSVENAKKFEPKYRLIRN 97
IY+ + ++FEP+Y + R+
Sbjct: 84 NIYNDKKTLQEFEPQYLIGRD 104
>sp|C4KIA8|RS24_SULIK 30S ribosomal protein S24e OS=Sulfolobus islandicus (strain M.16.4
/ Kamchatka #3) GN=rps24e PE=3 SV=1
Length = 120
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 15 MTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTG 74
+ N ++ R++ ++ V H G S+ ++ + +++ + ++ N + V K T +G G S
Sbjct: 21 VQNAVIGRREILLKVYHMGSGTPSRKDIIKAISQAFASQE-NLVVVRKISTSYGAGISNV 79
Query: 75 FGLIYDSVENAKKFEPKYRLIRNG 98
IY S E +K EPKY L R+
Sbjct: 80 KLHIYKSREILEKIEPKYLLDRDA 103
>sp|P19953|RS24_HALMA 30S ribosomal protein S24e OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rps24e
PE=1 SV=1
Length = 102
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N +L R +V+H A S+ +++ LA KD + + K T FG K+ G+
Sbjct: 11 NPMLHRTDVRFEVVH-DEATPSRLSVRDSLAATLN-KDAEEVVIHKLDTKFGMRKTVGYA 68
Query: 77 LIYDSVENAKKFEPKYRLIRN 97
+YD+ E A+ E + L RN
Sbjct: 69 KVYDNPEYARDVEQDHMLERN 89
>sp|B9LSM1|RS24_HALLT 30S ribosomal protein S24e OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rps24e PE=3
SV=1
Length = 102
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N +L R + H A S+ +++ LA + K + V + T FG K+ G+
Sbjct: 11 NPMLHRTDIRFETTHE-EATPSRLSVRDSLAAKLD-KASEEVVVHELDTKFGMRKTIGYA 68
Query: 77 LIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQ 109
+YD+ E+A E +Y L RN + +VE ++
Sbjct: 69 KVYDTAEDALDVEQEYMLERNKIGGEVEADAEE 101
>sp|Q97ZY6|RS24_SULSO 30S ribosomal protein S24e OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rps24e PE=3 SV=1
Length = 120
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 15 MTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTG 74
M N ++ R++ + V H G S+ ++ + + + ++ N + V K T +G G S
Sbjct: 21 MQNSVIGRREISLKVYHMGSGTPSRKDIIKAIIQALGSQE-NLVVVRKISTSYGAGISNV 79
Query: 75 FGLIYDSVENAKKFEPKYRLIRNG 98
IY S E +K EPKY L R+
Sbjct: 80 KLHIYKSREILEKVEPKYLLDRDA 103
>sp|C3MWX0|RS24_SULIM 30S ribosomal protein S24e OS=Sulfolobus islandicus (strain M.14.25
/ Kamchatka #1) GN=rps24e PE=3 SV=1
Length = 120
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 15 MTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTG 74
+ N ++ R++ + V H G S+ ++ + + + + ++ N + V K T +G G S
Sbjct: 21 VQNAVIGRREISLKVYHMGSGTPSRKDIIKAIIQAFASQE-NLVVVRKISTSYGAGISNV 79
Query: 75 FGLIYDSVENAKKFEPKYRLIRNG 98
IY S E +K EPKY L R+
Sbjct: 80 KLHIYKSREILEKIEPKYLLDRDA 103
>sp|C3N6N7|RS24_SULIA 30S ribosomal protein S24e OS=Sulfolobus islandicus (strain
M.16.27) GN=rps24e PE=3 SV=1
Length = 120
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 15 MTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTG 74
+ N ++ R++ + V H G S+ ++ + + + + ++ N + V K T +G G S
Sbjct: 21 VQNAVIGRREISLKVYHMGSGTPSRKDIIKAIIQAFASQE-NLVVVRKISTSYGAGISNV 79
Query: 75 FGLIYDSVENAKKFEPKYRLIRNG 98
IY S E +K EPKY L R+
Sbjct: 80 KLHIYKSREILEKIEPKYLLDRDA 103
>sp|C3N750|RS24_SULIY 30S ribosomal protein S24e OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=rps24e PE=3 SV=1
Length = 120
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 15 MTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTG 74
+ N ++ R++ + V H G S+ ++ + + + + ++ N + V K T +G G S
Sbjct: 21 VQNAVIGRREISLKVYHMGSGTPSRKDIIKAIIQAFASQE-NLVVVRKISTSYGAGISNI 79
Query: 75 FGLIYDSVENAKKFEPKYRLIRNG 98
IY S E +K EPKY L R+
Sbjct: 80 KLHIYKSREILEKIEPKYLLDRDA 103
>sp|C3NGI5|RS24_SULIN 30S ribosomal protein S24e OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=rps24e PE=3 SV=1
Length = 120
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 15 MTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTG 74
+ N ++ R++ + V H G S+ ++ + + + + ++ N + V K T +G G S
Sbjct: 21 VQNAVIGRREISLKVYHMGSGTPSRKDIIKAIIQAFASQE-NLVVVRKISTSYGAGISNI 79
Query: 75 FGLIYDSVENAKKFEPKYRLIRNG 98
IY S E +K EPKY L R+
Sbjct: 80 KLHIYKSREILEKIEPKYLLDRDA 103
>sp|C3MQY2|RS24_SULIL 30S ribosomal protein S24e OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=rps24e PE=3 SV=1
Length = 120
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 15 MTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTG 74
+ N ++ R++ + V H G S+ ++ + + + + ++ N + V K T +G G S
Sbjct: 21 VQNAVIGRREISLKVYHMGSGTPSRKDIIKAIIQAFASQE-NLVVVRKISTSYGAGISNI 79
Query: 75 FGLIYDSVENAKKFEPKYRLIRNG 98
IY S E +K EPKY L R+
Sbjct: 80 KLHIYKSREILEKIEPKYLLDRDA 103
>sp|A4YIV8|RS24_METS5 30S ribosomal protein S24e OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=rps24e PE=3 SV=1
Length = 113
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N+++ RK+ I V H G S+A++++ ++ K+ + + + K T +G G S
Sbjct: 23 NKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKE-DLVVIRKINTGYGAGISEATI 81
Query: 77 LIYDSVENAKKFEPKYRLIR 96
+Y + KFEP + + R
Sbjct: 82 HVYSEKDVLSKFEPAHLVNR 101
>sp|A0B8S8|RS24_METTP 30S ribosomal protein S24e OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rps24e PE=3 SV=1
Length = 99
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N LL R++ V+ V+H ++ + E+LA + + K P + V K + FG +S
Sbjct: 11 NPLLKRREIVLKVIHGEGPTPTRKSVVERLAAIKDSK-PGLVVVRKMNSLFGRRESIAHA 69
Query: 77 LIYDSVENAKKFEPKYRLIRNGLDTKVEKS 106
IY+S E ++ E + + RN + E S
Sbjct: 70 RIYESEERMRQVENPHIVKRNVFTEQKEAS 99
>sp|Q4JAF9|RS24_SULAC 30S ribosomal protein S24e OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rps24e PE=3 SV=1
Length = 118
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 15 MTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTG 74
+ N + +R++ I + H G S+ EL + +A + + + + V K T++G G S
Sbjct: 21 IQNNVANRRELYIKLFHIGSGTPSRKELVKAIASTFSTAE-DLVVVKKVFTNYGSGISYA 79
Query: 75 FGLIYDSVENAKKFEPKYRLIRN 97
+Y ++ +K EP+Y + R+
Sbjct: 80 RVNVYKDKDSLQKLEPQYLIGRD 102
>sp|Q97BH3|RS24_THEVO 30S ribosomal protein S24e OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=rps2e PE=3 SV=1
Length = 99
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFG 76
N +L RK+ + S+ E+KE +A+ +E I V + G + G+
Sbjct: 12 NPILKRKELKYTLKFENARTPSREEIKEIIAK-HEGAQKELIIVESNKQLTGKHEIVGYT 70
Query: 77 LIYDSVENAKKFEPKYRLIRNGLDTK 102
IY +A +EP Y LIRNGL K
Sbjct: 71 KIYQDKASAMLYEPDYELIRNGLKQK 96
>sp|Q8PZ95|RS24_METMA 30S ribosomal protein S24e OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rps24e PE=1 SV=1
Length = 101
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 17 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFK-FRTHFGGGKSTGF 75
N LL+R++ V + G + S+ +++ KLA M + P + V + +T +G +S G+
Sbjct: 11 NPLLNRRELDFIVKYEG-STPSRNDVRNKLAAM--LNAPLELLVIQRIKTEYGMQESKGY 67
Query: 76 GLIYDSVENAKKFEPKYRLIRNGL 99
+Y+ + K+ E +Y L RN +
Sbjct: 68 AKLYEDADRMKQVEQEYVLKRNAV 91
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,660,497
Number of Sequences: 539616
Number of extensions: 1767985
Number of successful extensions: 8078
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 7971
Number of HSP's gapped (non-prelim): 104
length of query: 135
length of database: 191,569,459
effective HSP length: 100
effective length of query: 35
effective length of database: 137,607,859
effective search space: 4816275065
effective search space used: 4816275065
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)