Query 032735
Match_columns 135
No_of_seqs 106 out of 1147
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 08:09:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032735.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032735hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 1.3E-34 4.6E-39 253.5 12.6 130 2-134 99-228 (547)
2 3rtk_A 60 kDa chaperonin 2; he 100.0 5E-34 1.7E-38 250.0 12.9 129 2-134 99-227 (546)
3 1iok_A Chaperonin 60; chaperon 100.0 3.2E-34 1.1E-38 251.0 9.4 130 2-134 100-229 (545)
4 1we3_A CPN60(groel); chaperoni 100.0 1.1E-33 3.9E-38 247.3 11.9 129 2-134 99-227 (543)
5 3iyg_H T-complex protein 1 sub 99.9 1.8E-26 6E-31 200.5 11.1 125 2-133 96-236 (515)
6 3p9d_G T-complex protein 1 sub 99.9 4.8E-27 1.6E-31 205.5 5.2 124 2-133 109-249 (550)
7 3p9d_D T-complex protein 1 sub 99.9 4.6E-25 1.6E-29 192.0 7.9 124 2-134 104-243 (528)
8 3ruv_A Chaperonin, CPN; double 99.9 6.2E-25 2.1E-29 191.8 8.1 122 2-133 104-240 (543)
9 3ko1_A Chaperonin; 9-fold symm 99.9 1.3E-24 4.5E-29 190.2 9.1 122 2-133 115-254 (553)
10 3p9d_B T-complex protein 1 sub 99.9 6.7E-25 2.3E-29 190.7 7.0 123 1-134 102-240 (527)
11 1a6d_A Thermosome (alpha subun 99.9 6.4E-24 2.2E-28 185.4 9.7 120 2-133 107-244 (545)
12 3iyg_E T-complex protein 1 sub 99.9 3.1E-24 1E-28 186.1 7.4 129 1-134 94-248 (515)
13 1q3q_A Thermosome alpha subuni 99.9 7.1E-24 2.4E-28 185.3 8.9 121 2-133 108-247 (548)
14 3aq1_B Thermosome subunit; gro 99.9 8.1E-24 2.8E-28 183.0 8.9 121 2-133 58-198 (500)
15 1a6d_B Thermosome (beta subuni 99.9 1.2E-23 4.1E-28 183.6 9.3 121 2-133 106-245 (543)
16 3iyg_Q T-complex protein 1 sub 99.9 1.3E-23 4.3E-28 182.2 9.4 125 1-131 95-238 (512)
17 3iyg_Z T-complex protein 1 sub 99.9 1.2E-23 4.2E-28 182.7 8.5 120 2-133 95-230 (517)
18 3iyg_B T-complex protein 1 sub 99.9 9.4E-23 3.2E-27 176.9 12.0 121 2-133 97-232 (513)
19 3p9d_A T-complex protein 1 sub 99.9 1.4E-23 4.6E-28 183.9 5.1 122 2-133 109-252 (559)
20 3iyg_D T-complex protein 1 sub 99.9 6.6E-23 2.3E-27 178.0 9.0 127 1-130 95-241 (518)
21 3m6c_A 60 kDa chaperonin 1; ch 99.9 7.5E-24 2.6E-28 164.9 2.1 44 91-134 1-44 (194)
22 3iyg_A T-complex protein 1 sub 99.9 3.8E-22 1.3E-26 173.6 10.8 122 2-133 95-236 (529)
23 3p9d_E T-complex protein 1 sub 99.9 6.3E-23 2.2E-27 179.8 2.3 122 2-129 130-281 (562)
24 3p9d_C T-complex protein 1 sub 99.8 1.7E-21 5.7E-26 172.0 5.1 122 2-133 104-251 (590)
25 3osx_A 60 kDa chaperonin; alph 99.8 1.7E-21 5.8E-26 152.2 3.6 42 93-134 10-51 (201)
26 3p9d_F T-complex protein 1 sub 99.8 5.8E-22 2E-26 173.0 -0.6 120 2-133 102-241 (546)
27 3iyg_G T-complex protein 1 sub 99.8 4E-20 1.4E-24 160.4 8.4 119 2-132 94-233 (515)
28 3p9d_H T-complex protein 1 sub 99.8 4E-19 1.4E-23 155.9 6.6 119 2-133 111-255 (568)
29 2ymb_A MITD1, MIT domain-conta 48.5 5.1 0.00017 31.9 0.8 36 78-125 98-133 (257)
30 2pbz_A Hypothetical protein; N 46.6 15 0.00051 29.5 3.3 47 62-112 230-283 (320)
31 4a5z_A MITD1, MIT domain-conta 39.9 8.9 0.0003 28.6 0.9 34 80-125 12-45 (163)
32 3k69_A Putative transcription 38.7 40 0.0014 24.1 4.3 64 14-87 1-65 (162)
33 1gff_3 Bacteriophage G4 capsid 30.9 42 0.0015 17.4 2.4 25 77-101 2-26 (26)
34 2ftx_B Hypothetical 24.6 kDa p 25.6 10 0.00035 24.1 -0.7 14 98-112 43-56 (64)
35 2aee_A OPRT, oprtase, orotate 23.3 78 0.0027 23.2 3.7 37 62-112 5-41 (211)
36 2fv4_B Hypothetical 24.6 kDa p 22.9 13 0.00043 24.6 -0.7 14 98-112 56-69 (77)
37 2law_A Yorkie homolog; YAP, SM 22.7 27 0.00091 19.2 0.8 18 106-124 20-37 (38)
38 3iis_M PCP, peridinin-chloroph 22.7 1.2E+02 0.0041 22.2 4.4 22 40-68 78-99 (151)
39 2ysg_A Syntaxin-binding protei 20.3 40 0.0014 18.7 1.2 18 106-124 21-38 (40)
40 2ysf_A E3 ubiquitin-protein li 20.0 39 0.0013 18.7 1.1 18 106-124 21-38 (40)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1.3e-34 Score=253.51 Aligned_cols=130 Identities=28% Similarity=0.445 Sum_probs=126.9
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHhhccCCChhhhHHHHHHHHHhccCCceEE
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMISTSEEIAQVATTSINGDKDIGALVARTIELVRKAEGHIF 81 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~~~~~i~~VAtisan~D~~iG~liaeA~~kVG~~dGvIt 81 (135)
++|| ++++++|+||+.|++|+++|++.+++.|+++|+||++.++|.+||++|+|+|+.+|+|+++||.+||+ +|+|+
T Consensus 99 l~ea--~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~V~~-dg~I~ 175 (547)
T 1kp8_A 99 ITEG--LKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGK-EGVIT 175 (547)
T ss_dssp HHHH--HHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCT-TSEEE
T ss_pred HHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHHhCc-CCcEE
Confidence 5678 89999999999999999999999999999999999999999999999999899999999999999999 99999
Q ss_pred EecCCCCCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEecccccC
Q 032735 82 ITEGKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 134 (135)
Q Consensus 82 vee~~~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs~ 134 (135)
|++|+++++++++++||+||+||+||||+|++++|.++++|||||++|.+|++
T Consensus 176 Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~ 228 (547)
T 1kp8_A 176 VEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISN 228 (547)
T ss_dssp EECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECC
T ss_pred EEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCC
Confidence 99999999999999999999999999999999999999999999999999986
No 2
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=5e-34 Score=250.04 Aligned_cols=129 Identities=31% Similarity=0.501 Sum_probs=125.4
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHhhccCCChhhhHHHHHHHHHhccCCceEE
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMISTSEEIAQVATTSINGDKDIGALVARTIELVRKAEGHIF 81 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~~~~~i~~VAtisan~D~~iG~liaeA~~kVG~~dGvIt 81 (135)
++|| .+++++|+||+.|++|+++|++.+++.|+++|+|+++.++|.+||++|+| |+.+|+++++||.+||+ +|+|+
T Consensus 99 L~ea--~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~liadAv~~V~~-dgvI~ 174 (546)
T 3rtk_A 99 VREG--LRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGN-EGVIT 174 (546)
T ss_dssp HHHH--HHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHHSCT-TSEEE
T ss_pred HHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHHHHHHHHHhcc-CCceE
Confidence 5678 89999999999999999999999999999999999999999999999997 99999999999999999 99999
Q ss_pred EecCCCCCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEecccccC
Q 032735 82 ITEGKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 134 (135)
Q Consensus 82 vee~~~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs~ 134 (135)
|+++++..+++++++||+||+||+||||+||+++|..+++|||||++|.||++
T Consensus 175 Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~ 227 (546)
T 3rtk_A 175 VEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVST 227 (546)
T ss_dssp EECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECC
T ss_pred EEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCC
Confidence 99999999999999999999999999999999999999999999999999986
No 3
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=3.2e-34 Score=250.99 Aligned_cols=130 Identities=30% Similarity=0.489 Sum_probs=126.7
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHhhccCCChhhhHHHHHHHHHhccCCceEE
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMISTSEEIAQVATTSINGDKDIGALVARTIELVRKAEGHIF 81 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~~~~~i~~VAtisan~D~~iG~liaeA~~kVG~~dGvIt 81 (135)
++|| ++++++|+||+.|++|+++|++.+++.|+++|+|+++.++|.+||++|+|+|+.+|+++++||.+||+ +|+|+
T Consensus 100 l~ea--~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~li~dAv~~V~~-~g~I~ 176 (545)
T 1iok_A 100 VREG--LKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGN-EGVIT 176 (545)
T ss_dssp HHHH--HHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHHHCT-TSCCC
T ss_pred HHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHHHHHHHHHhcc-CCeEE
Confidence 5678 89999999999999999999999999999999999999999999999999899999999999999999 99999
Q ss_pred EecCCCCCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEecccccC
Q 032735 82 ITEGKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 134 (135)
Q Consensus 82 vee~~~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs~ 134 (135)
|++|+++++++++++||+||+||+||||+||+++|.++++|||||++|.+|++
T Consensus 177 Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~ 229 (545)
T 1iok_A 177 VEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSS 229 (545)
T ss_dssp CEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCC
T ss_pred EEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCC
Confidence 99999999999999999999999999999999999999999999999999986
No 4
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.1e-33 Score=247.28 Aligned_cols=129 Identities=29% Similarity=0.457 Sum_probs=125.6
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHhhccCCChhhhHHHHHHHHHhccCCceEE
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMISTSEEIAQVATTSINGDKDIGALVARTIELVRKAEGHIF 81 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~~~~~i~~VAtisan~D~~iG~liaeA~~kVG~~dGvIt 81 (135)
++|| ++++++|+||+.|++|+++|++.+++.|+++|+|+++.++|.+||++|++ |+.+|+|+++||.+||+ +|+|+
T Consensus 99 L~ea--~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~li~dAv~~V~~-~g~I~ 174 (543)
T 1we3_A 99 VREG--LKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKLIADAMEKVGK-EGIIT 174 (543)
T ss_dssp HHHH--HHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCT-TSEEE
T ss_pred HHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHHHHHHHHHhCc-CCcEE
Confidence 5678 89999999999999999999999999999999999999999999999997 99999999999999999 99999
Q ss_pred EecCCCCCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEecccccC
Q 032735 82 ITEGKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 134 (135)
Q Consensus 82 vee~~~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs~ 134 (135)
|++|++.++++++++||+||+||+||||+|++++|.++++|||||++|.+|++
T Consensus 175 Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~ 227 (543)
T 1we3_A 175 VEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSN 227 (543)
T ss_dssp EEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCC
T ss_pred EecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCC
Confidence 99999999999999999999999999999999999999999999999999985
No 5
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.93 E-value=1.8e-26 Score=200.46 Aligned_cols=125 Identities=12% Similarity=0.107 Sum_probs=112.0
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccC--C----HHHHHHHHhhcc------CCChhhhHHHHHH
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMIS--T----SEEIAQVATTSI------NGDKDIGALVART 69 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~--~----~~~i~~VAtisa------n~D~~iG~liaeA 69 (135)
++|| .+++++|+||+.|++|+++|++.+++.|+++|.|++ + .+.+.+||++|. ++++.+|+|+++|
T Consensus 96 l~~a--~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdA 173 (515)
T 3iyg_H 96 LKQV--KPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDA 173 (515)
T ss_pred HHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHH
Confidence 5778 899999999999999999999999999999999994 6 566699998643 3688999999999
Q ss_pred HHHhccCC---ceEEEecCCC-CCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEeccccc
Q 032735 70 IELVRKAE---GHIFITEGKE-PGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFR 133 (135)
Q Consensus 70 ~~kVG~~d---GvItvee~~~-~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs 133 (135)
+.+||+ + |+|+|++.++ ..+++++++||+||+||+||||+|+|+ .++|||||++|.+++
T Consensus 174 v~~V~~-~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~----~~en~kIll~~~~Le 236 (515)
T 3iyg_H 174 VMMLDD-LLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPK----KYHNPMIALLNVELE 236 (515)
T ss_pred HHHhcc-cCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCc----cccccEEEEEccccc
Confidence 999999 9 9999998776 557899999999999999999999877 789999999999643
No 6
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=99.93 E-value=4.8e-27 Score=205.48 Aligned_cols=124 Identities=17% Similarity=0.191 Sum_probs=110.5
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccCC-----HHHHHHHHhhcc------CCChhhhHHHHHHH
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMIST-----SEEIAQVATTSI------NGDKDIGALVARTI 70 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~~-----~~~i~~VAtisa------n~D~~iG~liaeA~ 70 (135)
++|| .+++++|+||+.|++|+++|++.+++.|+++|+|++. .++|.+||++|. .+|+.+|+|+++|+
T Consensus 109 l~~a--~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv 186 (550)
T 3p9d_G 109 MKEA--KPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAV 186 (550)
T ss_dssp HHTT--SHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHH
T ss_pred HHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHH
Confidence 5788 8999999999999999999999999999999999964 678999999874 34889999999999
Q ss_pred HHhccCC------ceEEEecCCCCCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEeccccc
Q 032735 71 ELVRKAE------GHIFITEGKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFR 133 (135)
Q Consensus 71 ~kVG~~d------GvItvee~~~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs 133 (135)
.+||+.+ |+|+++ |.+.+++ ++++||+||+||+||||++++++ ++||+||++|.+|+
T Consensus 187 ~~V~~~~~dl~~I~Vikv~-Gg~~~ds-~lv~G~~~dk~~~s~yf~~~~~~----~en~kIll~~~~Le 249 (550)
T 3p9d_G 187 LSLDRNDLDDKLIGIKKIP-GGAMEES-LFINGVAFKKTFSYAGFEQQPKK----FNNPKILSLNVELE 249 (550)
T ss_dssp HHCCSSSCCGGGCCCCBCC-SSCGGGC-CCCSSEEECCCSSCTTCSCSCSC----CSSCCEEEECSCCS
T ss_pred HHhCccccCchheeEEEec-CCCccce-eEEeeEEEeccccccccccCccc----ccCceEEEeccccc
Confidence 9999415 999998 7777776 99999999999999999999887 89999999999864
No 7
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=99.91 E-value=4.6e-25 Score=192.02 Aligned_cols=124 Identities=15% Similarity=0.116 Sum_probs=112.7
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccC--CHHHHHHHHhhccCC------ChhhhHHHHHHHHHh
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMIS--TSEEIAQVATTSING------DKDIGALVARTIELV 73 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~--~~~~i~~VAtisan~------D~~iG~liaeA~~kV 73 (135)
++|| .+++++|+||+.|++|+++|++.+++.|+++|+|++ +.++|.+||++|+++ ++.+|+|+++|+.+|
T Consensus 104 l~~a--~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V 181 (528)
T 3p9d_D 104 LGAA--ERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKI 181 (528)
T ss_dssp HHHH--HHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTT
T ss_pred HHHH--HHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHh
Confidence 5678 899999999999999999999999999999999998 889999999999975 688999999999999
Q ss_pred ccC-CceEEEec-------CCCCCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEecccccC
Q 032735 74 RKA-EGHIFITE-------GKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 134 (135)
Q Consensus 74 G~~-dGvItvee-------~~~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs~ 134 (135)
|+. +|.|++++ |++.. +.++++||.||+||+|||| |...++||+||++|.+|+.
T Consensus 182 ~~~~~~~i~v~~I~I~k~~Gg~~~-ds~lv~G~v~dk~~~~~~~------m~~~ien~kIll~~~~le~ 243 (528)
T 3p9d_D 182 SDENSKNVDLNDIRLVKKVGGTID-DTEMIDGVVLTQTAIKSAG------GPTRKEKAKIGLIQFQISP 243 (528)
T ss_dssp CCTTTTCCCGGGSBCCCCCSSCSC-CCEEESSCBCCCCCCCSSS------CCSEESSEEEEEECCCSSC
T ss_pred ccccCCccceEEEEEEEecCCCcc-ceEEEeeeEEeecccCccc------CcccccCceEEEEeccccc
Confidence 972 38899887 87775 4799999999999999998 6678999999999999873
No 8
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=99.91 E-value=6.2e-25 Score=191.79 Aligned_cols=122 Identities=20% Similarity=0.201 Sum_probs=110.5
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccC--CHHHHHHHHhhccCC------ChhhhHHHHHHHHHh
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMIS--TSEEIAQVATTSING------DKDIGALVARTIELV 73 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~--~~~~i~~VAtisan~------D~~iG~liaeA~~kV 73 (135)
++|| .+++++|+||+.|++|+++|++.+++.|+++|+|++ +.++|.+||++|.++ |+.+|+|+++|+.+|
T Consensus 104 l~~a--~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V 181 (543)
T 3ruv_A 104 LRKA--EELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAV 181 (543)
T ss_dssp HHHH--HHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHH
T ss_pred HHHH--HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHh
Confidence 5678 899999999999999999999999999999999998 789999999999864 889999999999999
Q ss_pred ccCC-ce-----EEEecCCC-CCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEeccccc
Q 032735 74 RKAE-GH-----IFITEGKE-PGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFR 133 (135)
Q Consensus 74 G~~d-Gv-----Itvee~~~-~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs 133 (135)
|+ + |. |+|++.++ ..+++++++||+||+||+|||| ...++||+||++|.+++
T Consensus 182 ~~-~~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m-------~~~~~n~kIll~~~~Le 240 (543)
T 3ruv_A 182 VD-DEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQM-------PKKVTDAKIALLNCAIE 240 (543)
T ss_dssp CC-TTSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTS-------CSEEEEEEEEEESSCBS
T ss_pred hc-cCCCcccceEEEEEcCCCCcccceeecceEEeccccCccc-------cccccCcEEEEEccccc
Confidence 99 8 97 99997655 3478999999999999999998 34699999999999653
No 9
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=99.91 E-value=1.3e-24 Score=190.24 Aligned_cols=122 Identities=17% Similarity=0.173 Sum_probs=111.0
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccC--CHHHHHHHHhhccCC------ChhhhHHHHHHHHHh
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMIS--TSEEIAQVATTSING------DKDIGALVARTIELV 73 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~--~~~~i~~VAtisan~------D~~iG~liaeA~~kV 73 (135)
++|| .+++++|+||+.|++|+++|++.+++.|+++|+|++ +.++|.+||++|.++ ++.+|+|+++|+.+|
T Consensus 115 L~~a--~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V 192 (553)
T 3ko1_A 115 VKKA--EDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQV 192 (553)
T ss_dssp HHHH--HHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHH
T ss_pred HHhH--HHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHH
Confidence 5678 899999999999999999999999999999999998 789999999999875 789999999999999
Q ss_pred ccCC--ce-------EEEecCCC-CCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEeccccc
Q 032735 74 RKAE--GH-------IFITEGKE-PGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFR 133 (135)
Q Consensus 74 G~~d--Gv-------Itvee~~~-~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs 133 (135)
|+ + |+ |+|++.++ ..+++++++||.||+||+||||. ..++||+||++|.+++
T Consensus 193 ~~-~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~-------~~ien~kIll~d~~Le 254 (553)
T 3ko1_A 193 AE-LRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMP-------KRLENAKIALIDASLE 254 (553)
T ss_dssp CC-CTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTSC-------SCCBSCEEEEECSCBS
T ss_pred HH-hcCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCCc-------cccccceEEEecCccc
Confidence 99 7 99 99998776 34789999999999999999983 3689999999999653
No 10
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=99.91 E-value=6.7e-25 Score=190.74 Aligned_cols=123 Identities=19% Similarity=0.250 Sum_probs=107.3
Q ss_pred Ccccccchhhhcc-CCChHHHHHHHHHHHHHHHHHHhhcccccCC-----HHHHHHHHhhccCC------ChhhhHHHHH
Q 032735 1 MCNEGRNLLLENA-ELDDTEIRKGVQMAVDSVLENLSRSAQMIST-----SEEIAQVATTSING------DKDIGALVAR 68 (135)
Q Consensus 1 ~~~eg~~l~~v~a-G~nP~~l~rGi~~A~~~v~~~L~~~a~~v~~-----~~~i~~VAtisan~------D~~iG~liae 68 (135)
+++|| ++++++ |+||+.|++|+++|++.+++.|+++|.|+++ .++|.+||++|+|+ |+.+|+|+++
T Consensus 102 Ll~ea--~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~d 179 (527)
T 3p9d_B 102 LLREA--EKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATN 179 (527)
T ss_dssp HHHHH--HHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHH
T ss_pred HHHHH--HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHH
Confidence 35788 899999 9999999999999999999999999999987 79999999999976 7889999999
Q ss_pred HHHHhccCCc---eEEEecC-CCCCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEecccccC
Q 032735 69 TIELVRKAEG---HIFITEG-KEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 134 (135)
Q Consensus 69 A~~kVG~~dG---vItvee~-~~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs~ 134 (135)
||.+||+ +| +|+|++. .+..++.++++||+||+||+||| ++++ +||+||++|.+++.
T Consensus 180 Av~~V~~-~~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~----p~~~----~n~kIlll~~~le~ 240 (527)
T 3p9d_B 180 AILRLKG-STNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQ----PKRI----ENAKILIANTTLDT 240 (527)
T ss_dssp HHHTTCT-TCCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSC----CSCC----SSCEEEEECSCSSC
T ss_pred HHHHhcc-cCCcceEEEEEcCCCCccccEEEEeEEEecccCCCC----Ceee----ecceEEEecccccc
Confidence 9999999 98 9999972 23345679999999999999999 4554 79999999887653
No 11
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=99.90 E-value=6.4e-24 Score=185.42 Aligned_cols=120 Identities=16% Similarity=0.184 Sum_probs=109.5
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccC-CHHHHHHHHh------hccCCChhhhHHHHHHHHHhc
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMIS-TSEEIAQVAT------TSINGDKDIGALVARTIELVR 74 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~-~~~~i~~VAt------isan~D~~iG~liaeA~~kVG 74 (135)
++|| .+++++|+||+.|++|+++|++.+++.|+++|+| + +.++|.+||+ +++++|+.+|+|+++|+.+||
T Consensus 107 L~~a--~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~ 183 (545)
T 1a6d_A 107 LKQA--ETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVA 183 (545)
T ss_dssp HHHH--HHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHC
T ss_pred HHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHh
Confidence 5678 8999999999999999999999999999999999 8 8899999999 778888999999999999999
Q ss_pred cCC---------ceEEEe--cCCCCCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEeccccc
Q 032735 75 KAE---------GHIFIT--EGKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFR 133 (135)
Q Consensus 75 ~~d---------GvItve--e~~~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs 133 (135)
+ + ++|+|+ +|.+..+ .++++||.||+||+||||. ..++||+||++|.+++
T Consensus 184 ~-~~~g~~~~d~~~I~V~k~~G~~~~d-s~lv~G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le 244 (545)
T 1a6d_A 184 E-VRDGKTIVDTANIKVDKKNGGSVND-TQFISGIVIDKEKVHSKMP-------DVVKNAKIALIDSALE 244 (545)
T ss_dssp E-ESSSSEECCGGGEEEEECCCSCSTT-CEEESEEEESCCCSCTTSC-------SEEEEEEEEEECSCBS
T ss_pred c-ccCCCcccccceEEEEEecCCCcee-eEEEeeEEEeccCCCCCCc-------ceecCCEEEEEecCCC
Confidence 8 7 499999 8877765 4999999999999999993 2489999999999954
No 12
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.90 E-value=3.1e-24 Score=186.13 Aligned_cols=129 Identities=14% Similarity=0.183 Sum_probs=113.7
Q ss_pred CcccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccCC----HHHHHHHHhhccCCChhhhHHHHHHHHHhccC
Q 032735 1 MCNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMIST----SEEIAQVATTSINGDKDIGALVARTIELVRKA 76 (135)
Q Consensus 1 ~~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~~----~~~i~~VAtisan~D~~iG~liaeA~~kVG~~ 76 (135)
+++|| .+++++|+||+.|++|+++|++.+++.|+++|+|++. .++|.+||++|++ ++.+|. ++++|.+++.
T Consensus 94 Ll~~a--~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~-sK~i~~-~~~~l~~l~~- 168 (515)
T 3iyg_E 94 LLEEA--EQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLG-SKVVNS-CHRQMAEIAV- 168 (515)
T ss_pred HHHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhc-ccchhH-HHHHHHHHHH-
Confidence 35788 8999999999999999999999999999999999965 6899999999997 677886 8999999999
Q ss_pred CceEEEecCCC----------------CCeEEEEeeeeEecCccccceeeecCCC-ceEEeeceeEEE-----ecccccC
Q 032735 77 EGHIFITEGKE----------------PGVKLNLYSGFKLDWGYSSSCFVTNKKK-KLCFQSSTYLFL-----YGETFRL 134 (135)
Q Consensus 77 dGvItvee~~~----------------~~~~le~~eG~~fd~GYlSpyfvTd~~~-~~~~l~~p~ILi-----td~kIs~ 134 (135)
||+++|+++++ .-++.++++||+||+||+||||+|+.++ +.+.|+.||.+. ++.+|++
T Consensus 169 dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~ 248 (515)
T 3iyg_E 169 NAVLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTS 248 (515)
T ss_pred HHHHhhcccccCCCCcccEEEEEecCCCcccceEEeeEEEecccccccccccCCCceEEEEcCccccccccccceeeeCC
Confidence 99999987542 1146799999999999999999999885 899999999988 6667764
No 13
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=99.89 E-value=7.1e-24 Score=185.25 Aligned_cols=121 Identities=17% Similarity=0.197 Sum_probs=110.3
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccCC--HHHHHHHHh------hccCCChhhhHHHHHHHHHh
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMIST--SEEIAQVAT------TSINGDKDIGALVARTIELV 73 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~~--~~~i~~VAt------isan~D~~iG~liaeA~~kV 73 (135)
++|| .+++++|+||+.|++|+++|++.+++.|+++|+|+++ .+++.+||+ +++++|+.+|+|+++|+.+|
T Consensus 108 L~~a--~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V 185 (548)
T 1q3q_A 108 LRKA--EELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQV 185 (548)
T ss_dssp HHHH--HHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHH
T ss_pred HHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHh
Confidence 5678 8999999999999999999999999999999999975 899999999 77888899999999999999
Q ss_pred ccCC--c-------eEEEe--cCCCCCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEeccccc
Q 032735 74 RKAE--G-------HIFIT--EGKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFR 133 (135)
Q Consensus 74 G~~d--G-------vItve--e~~~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs 133 (135)
|+ + | +|+|+ +|.+..+ .++++||.||+||.||||. ..++||+||++|.+++
T Consensus 186 ~~-~~~g~~~~d~~~I~V~k~~G~~~~d-s~lv~G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le 247 (548)
T 1q3q_A 186 AE-KKDGKYVVDLDNIKFEKKAGEGVEE-SELVRGVVIDKEVVHPRMP-------KRVENAKIALINEALE 247 (548)
T ss_dssp CE-ESSSSEECCGGGEEEEEEEBSCGGG-CEEESSEEESCCCSSTTSC-------SEESSEEEEEECSCBS
T ss_pred cc-ccCCCccccCCeEEEEEecCCCccc-eEEEeeEEEeccCCCCCCc-------ceecCCEEEEEecCcC
Confidence 98 7 6 89999 8888765 5999999999999999993 2589999999999954
No 14
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=99.89 E-value=8.1e-24 Score=183.05 Aligned_cols=121 Identities=17% Similarity=0.152 Sum_probs=109.6
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccCC--HHHHHHHHh------hccCCChhhhHHHHHHHHHh
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMIST--SEEIAQVAT------TSINGDKDIGALVARTIELV 73 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~~--~~~i~~VAt------isan~D~~iG~liaeA~~kV 73 (135)
++|| .+++++|+||+.|++|+++|++.+++.|+++|+|++. .+++.+||+ +++++++.+|+|+++|+.+|
T Consensus 58 L~~a--~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v 135 (500)
T 3aq1_B 58 LSKA--EELIMKGVHSTIISEGYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSI 135 (500)
T ss_dssp HHHH--HHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTS
T ss_pred HHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHh
Confidence 4678 8999999999999999999999999999999999974 899999999 66878999999999999999
Q ss_pred ccCC--ce--------EEEe--cCCCCCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEeccccc
Q 032735 74 RKAE--GH--------IFIT--EGKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFR 133 (135)
Q Consensus 74 G~~d--Gv--------Itve--e~~~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs 133 (135)
|+ + |+ |+|+ +|.+. +++++++||.||+||+||||. ..++||+||++|.+++
T Consensus 136 ~~-~~~g~~~~di~~~I~V~k~~G~~~-~ds~lv~G~v~dk~~~~~~m~-------~~i~n~kIll~~~~Le 198 (500)
T 3aq1_B 136 VE-EEEDGLKVNVLENIKIEKRAGGSI-DDSELIDGLVIDKERSHPNMP-------EKVENAKILLLSCPVE 198 (500)
T ss_dssp EE-CCSSSCEECHHHHEEEEEEESSCG-GGCEEESEEEESCCCSSTTSC-------SEEEEEEEEEESSCBC
T ss_pred cc-cccCCccccccccEEEEEecCCCc-cceEEEeeeEEeecCCCCCCc-------ccccCCEEEEEeCCcc
Confidence 98 7 76 7888 78776 578999999999999999992 2689999999999954
No 15
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=99.89 E-value=1.2e-23 Score=183.57 Aligned_cols=121 Identities=14% Similarity=0.168 Sum_probs=110.1
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccCC--HHHHHHHHh------hccCCChhhhHHHHHHHHHh
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMIST--SEEIAQVAT------TSINGDKDIGALVARTIELV 73 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~~--~~~i~~VAt------isan~D~~iG~liaeA~~kV 73 (135)
++|| .+++++|+||+.|++|+++|++.+++.|+++|.|++. .+++.+||+ +++++|+.+|+|+++|+.+|
T Consensus 106 L~~a--~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v 183 (543)
T 1a6d_B 106 LQQA--QGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSV 183 (543)
T ss_dssp HHHH--HHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHH
T ss_pred HHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHh
Confidence 5678 8999999999999999999999999999999999975 799999999 77888899999999999999
Q ss_pred ccCC--ce-------EEEe--cCCCCCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEeccccc
Q 032735 74 RKAE--GH-------IFIT--EGKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFR 133 (135)
Q Consensus 74 G~~d--Gv-------Itve--e~~~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs 133 (135)
|+ + |+ |+|+ +|.+..+ .++++||.||+||.||||. ..++||+||++|.+++
T Consensus 184 ~~-~~~g~~~~d~~~I~V~k~~G~~~~d-s~lv~G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le 245 (543)
T 1a6d_B 184 AE-LRDGKYYVDFDNIQVVKKQGGAIDD-TQLINGIIVDKEKVHPGMP-------DVVKDAKIALLDAPLE 245 (543)
T ss_dssp EE-ECSSSEEECGGGEEEEEEESSCGGG-CEEESEEEESCCCSSTTSC-------SEEEEEEEEEESSCBS
T ss_pred cc-cccCCcccccceEEEEEecCCCccc-eeEEccEEEecCCCCCCCc-------ceecCCeEEEEecccc
Confidence 99 8 85 9999 8877764 5999999999999999993 2489999999999954
No 16
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.89 E-value=1.3e-23 Score=182.16 Aligned_cols=125 Identities=18% Similarity=0.210 Sum_probs=114.2
Q ss_pred CcccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhc----ccccCCHHHHHHHHhhccCC-----ChhhhHHHHHHHH
Q 032735 1 MCNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRS----AQMISTSEEIAQVATTSING-----DKDIGALVARTIE 71 (135)
Q Consensus 1 ~~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~----a~~v~~~~~i~~VAtisan~-----D~~iG~liaeA~~ 71 (135)
+++|| .+++++|+||+.|++|+++|++.+++.|+++ ++|+++.++|.+||++|.++ |+.+|+|+++||.
T Consensus 95 Ll~~a--~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~ 172 (512)
T 3iyg_Q 95 LLELA--EELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACV 172 (512)
T ss_pred HHHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHH
Confidence 35788 8999999999999999999999999999999 78889999999999999987 7889999999999
Q ss_pred HhccCC-ceEEEec-------CCCCCeEEEEeeeeEecCccccceeeecCC-CceEEeecee-EEEeccc
Q 032735 72 LVRKAE-GHIFITE-------GKEPGVKLNLYSGFKLDWGYSSSCFVTNKK-KKLCFQSSTY-LFLYGET 131 (135)
Q Consensus 72 kVG~~d-GvItvee-------~~~~~~~le~~eG~~fd~GYlSpyfvTd~~-~~~~~l~~p~-ILitd~k 131 (135)
+||+ + |+|++++ |.+. +++++++||+|||||.| |+++.+ .+.+.|+.|| ++.+|.+
T Consensus 173 ~V~~-~~~~i~v~~I~i~k~~Ggs~-~ds~lv~G~~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k 238 (512)
T 3iyg_Q 173 SIFP-DSGHFNVDNIRVCKILGSGV-HSSSVLHGMVFKKETEG--DVTSVKDAKIAVYSCPFDGMITETK 238 (512)
T ss_pred HHhc-cCCcccHhHeeEeeccCCCc-ccceEEeeEEEecCcCC--CCcccccCceEEEeccccccccccc
Confidence 9999 7 7899887 5555 78999999999999987 999888 7788899999 9999988
No 17
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.89 E-value=1.2e-23 Score=182.68 Aligned_cols=120 Identities=18% Similarity=0.192 Sum_probs=110.1
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccC-CHHHHHHHHhhccCCChhhhHHHHHHHHHhccCCceE
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMIS-TSEEIAQVATTSINGDKDIGALVARTIELVRKAEGHI 80 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~-~~~~i~~VAtisan~D~~iG~liaeA~~kVG~~dGvI 80 (135)
.+|| .+++++|+||+.|++|+++|++.+++.|+++|.|++ +.++|.+||++|.++ +++..++++|.+++. ||++
T Consensus 95 l~~a--~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~s--Ki~~~~~d~la~l~v-daV~ 169 (517)
T 3iyg_Z 95 LKQA--DLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRT--KVHAELADVLTEAVV-DSIL 169 (517)
T ss_pred HHHH--HHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhcc--ccchhHHHHHHHHHH-HHhh
Confidence 5677 899999999999999999999999999999999998 889999999999974 589999999999999 9999
Q ss_pred EEecCC---------------CCCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEeccccc
Q 032735 81 FITEGK---------------EPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFR 133 (135)
Q Consensus 81 tvee~~---------------~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs 133 (135)
+|++++ +..+++++++||.||+||+||| |...++||+||++|.+|+
T Consensus 170 ~V~~~~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le 230 (517)
T 3iyg_Z 170 AIKKQDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLE 230 (517)
T ss_pred eeccCCCcCChhHheeeeecCCCccccceEeeEEEeccCCCCC-------ccccccCCeEEEeccccc
Confidence 999875 4567899999999999999998 456899999999999875
No 18
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=99.88 E-value=9.4e-23 Score=176.85 Aligned_cols=121 Identities=14% Similarity=0.093 Sum_probs=107.0
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccC-----CHHHHHHHHh--hcc----CCChhhhHHHHHHH
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMIS-----TSEEIAQVAT--TSI----NGDKDIGALVARTI 70 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~-----~~~~i~~VAt--isa----n~D~~iG~liaeA~ 70 (135)
++|| .+++++|+||+.|++|+++|++.+++.|+++|+|++ +.++|.+||+ +|+ ++++.+|+|+++|+
T Consensus 97 L~~a--~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv 174 (513)
T 3iyg_B 97 LREA--ESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAV 174 (513)
T ss_pred HHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHH
Confidence 5778 899999999999999999999999999999999997 6789999997 565 35788999999999
Q ss_pred HHhccCC---ceEEEec-CCCCCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEeccccc
Q 032735 71 ELVRKAE---GHIFITE-GKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFR 133 (135)
Q Consensus 71 ~kVG~~d---GvItvee-~~~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs 133 (135)
.+||+ + |.|+|++ ..+..++.++++||.||+||.+| |...++||+||++|.+++
T Consensus 175 ~~V~~-~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~--------m~~~~en~kIll~~~~Le 232 (513)
T 3iyg_B 175 LRLKG-SGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVN--------QPKRIENAKILIANTGMD 232 (513)
T ss_pred HHhcc-cCCcCeEEEEEeCCCCccceeEEeeEEEeccccCC--------CceeecCceEEEEcCCcc
Confidence 99999 9 9999997 33445567999999999999988 566899999999998543
No 19
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=99.88 E-value=1.4e-23 Score=183.95 Aligned_cols=122 Identities=16% Similarity=0.214 Sum_probs=108.2
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhh-cccccCC--HHHHHHHHhhccCC------ChhhhHHHHHHHHH
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSR-SAQMIST--SEEIAQVATTSING------DKDIGALVARTIEL 72 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~-~a~~v~~--~~~i~~VAtisan~------D~~iG~liaeA~~k 72 (135)
++|| .+++++|+||+.|++|+++|++.+++.|++ +|+|++. .++|.+||++|.++ ++.+|+|+++||.+
T Consensus 109 L~~a--~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~ 186 (559)
T 3p9d_A 109 LKRA--NELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLA 186 (559)
T ss_dssp HHHH--HHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHH
T ss_pred HHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHH
Confidence 5678 899999999999999999999999999999 9999985 78999999999976 78999999999999
Q ss_pred hcc--C--CceEEEec-------CCCCCeEEEEeeeeEecCccccceeeecCCCceEEee--ceeEEEeccccc
Q 032735 73 VRK--A--EGHIFITE-------GKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQS--STYLFLYGETFR 133 (135)
Q Consensus 73 VG~--~--dGvItvee-------~~~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~--~p~ILitd~kIs 133 (135)
||+ . +|+|++++ |.+.. ++++++||.||+||+||||.+ .++ ||+||++|.+|+
T Consensus 187 V~~~~~~~~~~i~l~~I~I~k~~Ggs~~-ds~lv~G~v~dk~~~~~~m~~-------~ie~~n~kIll~~~~Le 252 (559)
T 3p9d_A 187 VKTQNSKGEIKYPVKAVNVLKAHGKSAT-ESLLVPGYALNCTVASQAMPK-------RIAGGNVKIACLDLNLQ 252 (559)
T ss_dssp HCCEESSSCEECCTTCCCEEEEESSCSS-CCBCCSEECCCCCCSSTTSCS-------EECSSSBCEEEETTCCS
T ss_pred hcccccCCCCccchhHeEEEEecCCCcc-ceeEeccEEEeecccCCCcce-------eeccCCceEEEEecccc
Confidence 993 1 38866665 87776 479999999999999999873 566 999999999985
No 20
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.88 E-value=6.6e-23 Score=178.01 Aligned_cols=127 Identities=17% Similarity=0.102 Sum_probs=111.4
Q ss_pred CcccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccC--CHHHHHHHHhhccCCC------hhhhHHHHHHHHH
Q 032735 1 MCNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMIS--TSEEIAQVATTSINGD------KDIGALVARTIEL 72 (135)
Q Consensus 1 ~~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~--~~~~i~~VAtisan~D------~~iG~liaeA~~k 72 (135)
+++|| .+++++|+||+.|++|+++|++.+++.|+++|+|++ +.++|.+||++|++++ +.+|+|+++||.+
T Consensus 95 Ll~~a--~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~ 172 (518)
T 3iyg_D 95 LLDSC--TKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMK 172 (518)
T ss_pred HHHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHH
Confidence 35788 899999999999999999999999999999999998 7899999999999875 7899999999999
Q ss_pred hccC--Cce-----EEEecCC-CCCeEEEEeeeeEecCcccc--ceeeecCCC--ceEEeeceeEEEecc
Q 032735 73 VRKA--EGH-----IFITEGK-EPGVKLNLYSGFKLDWGYSS--SCFVTNKKK--KLCFQSSTYLFLYGE 130 (135)
Q Consensus 73 VG~~--dGv-----Itvee~~-~~~~~le~~eG~~fd~GYlS--pyfvTd~~~--~~~~l~~p~ILitd~ 130 (135)
||+. +|+ |+|++.. +..+++++++||+||+||+| |||++|+.- +.+.|++|++. +|.
T Consensus 173 V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~~mp~~i~n~kIlll~~~Le~~k~~-~~~ 241 (518)
T 3iyg_D 173 VIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTD-MDN 241 (518)
T ss_pred hhccccCCCcccceEEEEEcCCCChhhheEeccEEEecccccCCCccccCceEEEEEeeccccccc-cCc
Confidence 9952 576 8998754 34568899999999999999 999888776 67888888877 666
No 21
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.88 E-value=7.5e-24 Score=164.93 Aligned_cols=44 Identities=20% Similarity=0.372 Sum_probs=42.5
Q ss_pred EEEEeeeeEecCccccceeeecCCCceEEeeceeEEEecccccC
Q 032735 91 KLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 134 (135)
Q Consensus 91 ~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs~ 134 (135)
+|+++|||||||||+|||||||+++|+|+|+|||||+||+|||+
T Consensus 1 elevvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~ 44 (194)
T 3m6c_A 1 ELEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISS 44 (194)
T ss_dssp CCCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECC
T ss_pred CeEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCC
Confidence 47899999999999999999999999999999999999999986
No 22
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.87 E-value=3.8e-22 Score=173.60 Aligned_cols=122 Identities=13% Similarity=0.139 Sum_probs=109.1
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhh-cccccC--CHHHHHHHHhhcc------CCChhhhHHHHHHHHH
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSR-SAQMIS--TSEEIAQVATTSI------NGDKDIGALVARTIEL 72 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~-~a~~v~--~~~~i~~VAtisa------n~D~~iG~liaeA~~k 72 (135)
++|| .+++++|+||+.|++|+++|.+.+++.|++ +|+|++ +.+++.+||++|. ++++.+|+|+++|+.+
T Consensus 95 L~~a--~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~ 172 (529)
T 3iyg_A 95 LKNA--DELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLA 172 (529)
T ss_pred HHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHH
Confidence 5677 899999999999999999999999999999 999998 7899999999885 3578999999999999
Q ss_pred hc---cCCc-----e--EEEecCCCCC-eEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEeccccc
Q 032735 73 VR---KAEG-----H--IFITEGKEPG-VKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFR 133 (135)
Q Consensus 73 VG---~~dG-----v--Itvee~~~~~-~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs 133 (135)
|| + +| + |+|+...+.. ++.++++||.||+||.||||.+ .++||+||++|.+++
T Consensus 173 V~~~~~-~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~-------~ien~kIlll~~~le 236 (529)
T 3iyg_A 173 IKYTDI-RGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPK-------RIVNAKIACLDFSLQ 236 (529)
T ss_pred Hhhhcc-CCCcccccceEEEEEecCCCccceEEEeeeEEecCcccccCCc-------ccCCceEEEecCCcc
Confidence 99 6 67 5 8998776655 6789999999999999999976 478999999999764
No 23
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=99.86 E-value=6.3e-23 Score=179.82 Aligned_cols=122 Identities=19% Similarity=0.193 Sum_probs=106.0
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccCCH------HHHHHHHhhccCCChhhhHHHHHHHHHhcc
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMISTS------EEIAQVATTSINGDKDIGALVARTIELVRK 75 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~~~------~~i~~VAtisan~D~~iG~liaeA~~kVG~ 75 (135)
++|| .+++++|+||+.|++|+++|++.+++.|+++|+|+++. +.|.+||++|.+ +..+|. ++++|.+++.
T Consensus 130 L~~a--~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~-sK~i~~-~~d~la~l~v 205 (562)
T 3p9d_E 130 LDQA--LELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLG-SKIVSK-DHDRFAEMAV 205 (562)
T ss_dssp HHHH--HHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHS-SSTTTT-THHHHHHHHH
T ss_pred HHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcC-CchhHH-HHHHHHHHHH
Confidence 5678 89999999999999999999999999999999999753 689999999997 677777 7899999999
Q ss_pred CCceEEEec-----------------CCCCCeEEEEeeeeEecCccccceeeecC-------CCceEEeeceeEEEec
Q 032735 76 AEGHIFITE-----------------GKEPGVKLNLYSGFKLDWGYSSSCFVTNK-------KKKLCFQSSTYLFLYG 129 (135)
Q Consensus 76 ~dGvItvee-----------------~~~~~~~le~~eG~~fd~GYlSpyfvTd~-------~~~~~~l~~p~ILitd 129 (135)
||+++|++ |++.. +.++++||+||+||+||||+|+. +.+.+.|+.||.+..+
T Consensus 206 -dAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~-ds~lveGmv~dk~~~sp~m~~~~~~~~~~~~~kIall~~~le~~k~ 281 (562)
T 3p9d_E 206 -EAVINVMDKDRKDVDFDLIKMQGRVGGSIS-DSKLINGVILDKDFSHPQMPKCVLPKEGSDGVKLAILTCPFEPPKP 281 (562)
T ss_dssp -HHHHTSSTTTCSCCCCCCCEEEEESSSCGG-GCEEESSEEESSCCCTTSCCC-----TTCSSCEECEEESCCSSCCC
T ss_pred -HHheeecccccCCCCcccEEEEEecCCChh-hhceeeeEEEecCCCCCCcCcccccccccccceEEEeccccccccc
Confidence 99998887 33444 45999999999999999999987 7888999999998866
No 24
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=99.83 E-value=1.7e-21 Score=172.02 Aligned_cols=122 Identities=11% Similarity=0.113 Sum_probs=98.5
Q ss_pred cccccchhh-hccCCChHHHHHHHHHHHHHHHHHHhhcccccCC--HHHHHHHHhhc--c----CCChhhhHHHHHHHHH
Q 032735 2 CNEGRNLLL-ENAELDDTEIRKGVQMAVDSVLENLSRSAQMIST--SEEIAQVATTS--I----NGDKDIGALVARTIEL 72 (135)
Q Consensus 2 ~~eg~~l~~-v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~~--~~~i~~VAtis--a----n~D~~iG~liaeA~~k 72 (135)
++|| .++ +++|+||+.|++|+++|++.+++.|+++|+|++. .+.|.+||++| + ++|+.+|+|+++|+.+
T Consensus 104 L~~a--~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~ 181 (590)
T 3p9d_C 104 LAQC--APYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKT 181 (590)
T ss_dssp HHHH--HHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTT
T ss_pred Hhhh--HHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHH
Confidence 4677 899 9999999999999999999999999999999975 68999999754 4 4588999999999999
Q ss_pred hccCCceEEEecCCC-----------------CCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEeccccc
Q 032735 73 VRKAEGHIFITEGKE-----------------PGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFR 133 (135)
Q Consensus 73 VG~~dGvItvee~~~-----------------~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs 133 (135)
||+ +|+++++++++ .-++.++++||.||+|+ +++ +|...++|||||++|.+++
T Consensus 182 V~~-~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~------~~~-~m~~~~en~kIll~d~~Le 251 (590)
T 3p9d_C 182 VRK-DLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDV------VHP-KMSRHIENPRVVLLDCPLE 251 (590)
T ss_dssp STT-CC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCC------SCT-TSCSCEESCCEECCCCCCS
T ss_pred hcc-cccCccccccccccchhhceEEEEecCCCcccceeeeEEEEeccc------CCC-CCcceeeeeEEEEEccccc
Confidence 999 99987764321 12457899999999995 444 6888999999999999553
No 25
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.83 E-value=1.7e-21 Score=152.24 Aligned_cols=42 Identities=19% Similarity=0.347 Sum_probs=38.9
Q ss_pred EEeeeeEecCccccceeeecCCCceEEeeceeEEEecccccC
Q 032735 93 NLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFRL 134 (135)
Q Consensus 93 e~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs~ 134 (135)
.=.|||||||||+|||||||+++|+|+|+|||||+||+|||+
T Consensus 10 ~~~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~ 51 (201)
T 3osx_A 10 HGSEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISN 51 (201)
T ss_dssp --CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECC
T ss_pred cCccccEecCccCChheeecccCCEEEecCCeEEEEcCccCC
Confidence 346899999999999999999999999999999999999986
No 26
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=99.82 E-value=5.8e-22 Score=173.02 Aligned_cols=120 Identities=13% Similarity=0.151 Sum_probs=107.3
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhccccc----CCHHHHHHHHhhccCCChhhhHHHHHHHHHhccCC
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMI----STSEEIAQVATTSINGDKDIGALVARTIELVRKAE 77 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v----~~~~~i~~VAtisan~D~~iG~liaeA~~kVG~~d 77 (135)
++|| .+++++|+||+.|++|+++|++.+++.|+++|+|+ .+.+.|.+||++|.+ .+++..++++|.+++. |
T Consensus 102 L~~a--~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~--sKi~~~~~d~la~l~v-d 176 (546)
T 3p9d_F 102 LRQA--HRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLL--TKVDADLTEVLTPIVT-D 176 (546)
T ss_dssp HHHH--HHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTC--STTHHHHCSSHHHHHH-H
T ss_pred HHHH--HHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhC--CCcchhHHHHHHHHHH-H
Confidence 5678 89999999999999999999999999999999999 478999999999996 3799999999999999 9
Q ss_pred ceEEEecCC----------------CCCeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEeccccc
Q 032735 78 GHIFITEGK----------------EPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETFR 133 (135)
Q Consensus 78 GvItvee~~----------------~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kIs 133 (135)
|+++|++++ +..++.++++||.||+||+||+ |...++||+||++|.+++
T Consensus 177 aV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~-------m~~~~en~kIll~~~~Le 241 (546)
T 3p9d_F 177 AVLSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPD-------MPTRVKNAYVLILNVSLE 241 (546)
T ss_dssp HHHHTHHHHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSS-------SCSSBCSCCCCEECCCSS
T ss_pred hheEeecCCCCcccchheEEEEecCCCccccEEEeeEEEeccccccc-------CcceecCceEEEecCccc
Confidence 999998642 3456778999999999999995 567899999999997664
No 27
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.81 E-value=4e-20 Score=160.43 Aligned_cols=119 Identities=10% Similarity=0.112 Sum_probs=103.2
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhcccccCC--HHHHHHHHhhccCCChhhhHHHHHHHHHhccCCce
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMIST--SEEIAQVATTSINGDKDIGALVARTIELVRKAEGH 79 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v~~--~~~i~~VAtisan~D~~iG~liaeA~~kVG~~dGv 79 (135)
+++| .+++++|+||+.|++|+++|++.+++.|+++|.|++. .+.+.+||++|. +++.+|++++.++ +++. |++
T Consensus 94 L~~a--~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl-~sK~i~~~~~~~~-~i~v-dav 168 (515)
T 3iyg_G 94 LSVA--EHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSI-TTKVISRWSSLAC-NIAL-DAV 168 (515)
T ss_pred HHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHh-cCCchhhHHHHHH-HHHH-HHH
Confidence 5678 8999999999999999999999999999999999975 689999999888 5899999988877 7899 999
Q ss_pred EEEe-cCCCC------------------CeEEEEeeeeEecCccccceeeecCCCceEEeeceeEEEecccc
Q 032735 80 IFIT-EGKEP------------------GVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYLFLYGETF 132 (135)
Q Consensus 80 Itve-e~~~~------------------~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~ILitd~kI 132 (135)
++|+ ++++. -.+.++++||.||+||.||+ |...++||+||++|.++
T Consensus 169 ~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~~L 233 (515)
T 3iyg_G 169 KTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSL 233 (515)
T ss_pred HhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCC-------CcceeeeeEEEEEcccc
Confidence 9987 43321 13579999999999999995 55789999999999954
No 28
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=99.76 E-value=4e-19 Score=155.92 Aligned_cols=119 Identities=16% Similarity=0.149 Sum_probs=102.8
Q ss_pred cccccchhhhccCCChHHHHHHHHHHHHHHHHHHhhccccc----CCHHHHHHHHhhcc-----CCChhhhHHHHHHHHH
Q 032735 2 CNEGRNLLLENAELDDTEIRKGVQMAVDSVLENLSRSAQMI----STSEEIAQVATTSI-----NGDKDIGALVARTIEL 72 (135)
Q Consensus 2 ~~eg~~l~~v~aG~nP~~l~rGi~~A~~~v~~~L~~~a~~v----~~~~~i~~VAtisa-----n~D~~iG~liaeA~~k 72 (135)
++|| .+++++|+||+.|++|+++|++.+++.|+++|.|+ .+.++|.+||++|. ++|+.+|+|+++||.+
T Consensus 111 l~~a--~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~ 188 (568)
T 3p9d_H 111 LNVS--EKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSH 188 (568)
T ss_dssp HHHH--HHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTT
T ss_pred HHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHH
Confidence 5678 89999999999999999999999999999999988 78899999999884 3478899999999999
Q ss_pred hccCC-----c-------eEEEec--CCCCCeEEEEeeeeEecCccccceeeecCCCceEEee---ceeEEEeccccc
Q 032735 73 VRKAE-----G-------HIFITE--GKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQS---STYLFLYGETFR 133 (135)
Q Consensus 73 VG~~d-----G-------vItvee--~~~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~---~p~ILitd~kIs 133 (135)
|++ + | .|+|+. |.+..+ .++++||.||++|. .|...++ ||+||++|.+++
T Consensus 189 V~~-~~~~~~~~~~~dl~~I~I~k~~Ggs~~d-S~lv~G~v~dk~~~---------~m~~~i~~~~n~kIlll~~~Le 255 (568)
T 3p9d_H 189 VLP-VAQQAGEIPYFNVDSIRVVKIMGGSLSN-STVIKGMVFNREPE---------GHVKSLSEDKKHKVAVFTCPLD 255 (568)
T ss_dssp SCC----------CCCGGGCEEEEEESSCGGG-CEEESSCCBSSCBS---------SGGGSCCCCSSCEEEEECSCSS
T ss_pred Hhh-ccccccCCcccccceEEEEEccCCCcch-heeeccEEEeeccc---------CCcEEEecCCcceEEEEccCcc
Confidence 998 7 5 799987 766654 48999999999983 4566777 999999999864
No 29
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=48.52 E-value=5.1 Score=31.92 Aligned_cols=36 Identities=19% Similarity=0.314 Sum_probs=24.6
Q ss_pred ceEEEecCCCCCeEEEEeeeeEecCccccceeeecCCCceEEeeceeE
Q 032735 78 GHIFITEGKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYL 125 (135)
Q Consensus 78 GvItvee~~~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~I 125 (135)
-.|+|+++.+ |..||+ -+.||+ |..-.++.++||||
T Consensus 98 ~~i~I~~n~~---------G~sY~~-lFg~yl--~~~~~~i~i~DPYi 133 (257)
T 2ymb_A 98 KQIKIEENAT---------GFSYES-LFREYL--NETVTEVWIEDPYI 133 (257)
T ss_dssp CEEEECTTCC---------SCCHHH-HSSTTC--STTCCEEEEECSCC
T ss_pred EEEEECCCCc---------cccHHH-HHHHHH--hcCCeEEEEeCcee
Confidence 3456666654 666665 458999 33446899999998
No 30
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=46.63 E-value=15 Score=29.51 Aligned_cols=47 Identities=13% Similarity=0.018 Sum_probs=28.5
Q ss_pred hhHHHHHHHHHh---ccCCceEEEecCCCCCeEEEEee-eeEecCc---cccceeeec
Q 032735 62 IGALVARTIELV---RKAEGHIFITEGKEPGVKLNLYS-GFKLDWG---YSSSCFVTN 112 (135)
Q Consensus 62 iG~liaeA~~kV---G~~dGvItvee~~~~~~~le~~e-G~~fd~G---YlSpyfvTd 112 (135)
++.-+++++.++ |. .|++.+| -+...++-+.| +.+|.-| | |||....
T Consensus 230 ~a~~i~~~L~~l~~~g~-~G~~~vE--~~~dg~~~v~EIapR~~GGt~~~-~~y~~~~ 283 (320)
T 2pbz_A 230 YGLAFVRTMRELEPPGV-IGPFALH--FAYDGSFKAIGIASRIDGGSNAD-HWYSELY 283 (320)
T ss_dssp HHHHHHHHHHHHSTTCC-CSEEEEE--EECSSSCEEEEEESSBCSGGGSC-CCCHHHH
T ss_pred HHHHHHHHHHhhccCCc-eeeEEEE--EcCCCcEEEEEecCCCCCCCCcc-CCceeee
Confidence 344455555433 77 9999999 22222222222 7888888 8 9987653
No 31
>4a5z_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; 2.30A {Homo sapiens}
Probab=39.89 E-value=8.9 Score=28.62 Aligned_cols=34 Identities=21% Similarity=0.332 Sum_probs=24.3
Q ss_pred EEEecCCCCCeEEEEeeeeEecCccccceeeecCCCceEEeeceeE
Q 032735 80 IFITEGKEPGVKLNLYSGFKLDWGYSSSCFVTNKKKKLCFQSSTYL 125 (135)
Q Consensus 80 Itvee~~~~~~~le~~eG~~fd~GYlSpyfvTd~~~~~~~l~~p~I 125 (135)
|.|+++.+ |..||+ -..||+ +..-.++.++||||
T Consensus 12 ~~i~en~t---------G~SYe~-LFg~YL--~~~~~~I~IeDPYI 45 (163)
T 4a5z_A 12 IKIEENAT---------GFSYES-LFREYL--NETVTEVWIEDPYI 45 (163)
T ss_dssp EEECTTCC---------CCCHHH-HHGGGC--CTTCCEEEEECSCC
T ss_pred eeeecCCc---------cccHHH-HHHHHH--hCCceEEEEECCcc
Confidence 55666654 667775 458999 22458899999998
No 32
>3k69_A Putative transcription regulator; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.95A {Lactobacillus plantarum} SCOP: a.4.5.0
Probab=38.74 E-value=40 Score=24.13 Aligned_cols=64 Identities=22% Similarity=0.333 Sum_probs=39.6
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhc-ccccCCHHHHHHHHhhccCCChhhhHHHHHHHHHhccCCceEEEecCCC
Q 032735 14 ELDDTEIRKGVQMAVDSVLENLSRS-AQMISTSEEIAQVATTSINGDKDIGALVARTIELVRKAEGHIFITEGKE 87 (135)
Q Consensus 14 G~nP~~l~rGi~~A~~~v~~~L~~~-a~~v~~~~~i~~VAtisan~D~~iG~liaeA~~kVG~~dGvItvee~~~ 87 (135)
|+++|.|..-.+-|+..++ .|... -.|+ +.++|++--.||.+ .+.+.+.++-+ .|.|.-..|++
T Consensus 1 ~~~~Mkis~k~~yAlr~l~-~La~~~~~~~-s~~~IA~~~~is~~-------~l~kil~~L~~-aGlv~s~rG~~ 65 (162)
T 3k69_A 1 GMGGSNMKLDFSVAVHSIL-YLDAHRDSKV-ASRELAQSLHLNPV-------MIRNILSVLHK-HGYLTGTVGKN 65 (162)
T ss_dssp ------CTHHHHHHHHHHH-HHHTTTTSCB-CHHHHHHHHTSCGG-------GTHHHHHHHHH-TTSSEEECSTT
T ss_pred CCCCccccHHHHHHHHHHH-HHHhCCCCCc-CHHHHHHHHCcCHH-------HHHHHHHHHHH-CCCEEeecCCC
Confidence 5688999888898887655 66543 3444 56778776666664 35666677777 88887776664
No 33
>1gff_3 Bacteriophage G4 capsid proteins GPF, GPG, GPJ; coat protein, icosahedral virus; 3.00A {Enterobacteria phage G4}
Probab=30.90 E-value=42 Score=17.37 Aligned_cols=25 Identities=24% Similarity=0.320 Sum_probs=18.7
Q ss_pred CceEEEecCCCCCeEEEEeeeeEec
Q 032735 77 EGHIFITEGKEPGVKLNLYSGFKLD 101 (135)
Q Consensus 77 dGvItvee~~~~~~~le~~eG~~fd 101 (135)
.+.|--..|+.-+..|.++.|-||.
T Consensus 2 k~s~rrs~~r~kgarlwyvggtq~~ 26 (26)
T 1gff_3 2 KKSIRRSGGKSKGARLWYVGGTQYX 26 (26)
T ss_pred CcccccCCCCCCceEEEEecceecC
Confidence 4555556677778899999998873
No 34
>2ftx_B Hypothetical 24.6 kDa protein in ILV2-ADE17 intergenic region; alpha-beta, complex, coiled-coil, structural protein, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.300.1.2
Probab=25.58 E-value=10 Score=24.13 Aligned_cols=14 Identities=29% Similarity=0.370 Sum_probs=11.0
Q ss_pred eEecCccccceeeec
Q 032735 98 FKLDWGYSSSCFVTN 112 (135)
Q Consensus 98 ~~fd~GYlSpyfvTd 112 (135)
+.+|.+| |+||.|+
T Consensus 43 l~i~~~~-S~fFytn 56 (64)
T 2ftx_B 43 LPLDNNL-SDFYKTK 56 (64)
T ss_dssp EECCTTS-CHHHHHH
T ss_pred EEcCCCc-chHHHHH
Confidence 3567888 9999885
No 35
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=23.29 E-value=78 Score=23.16 Aligned_cols=37 Identities=14% Similarity=0.301 Sum_probs=24.3
Q ss_pred hhHHHHHHHHHhccCCceEEEecCCCCCeEEEEeeeeEecCccccceeeec
Q 032735 62 IGALVARTIELVRKAEGHIFITEGKEPGVKLNLYSGFKLDWGYSSSCFVTN 112 (135)
Q Consensus 62 iG~liaeA~~kVG~~dGvItvee~~~~~~~le~~eG~~fd~GYlSpyfvTd 112 (135)
..+++++.+.+. |+|++..- ..+.+.+|+.||||+.+
T Consensus 5 ~~~~~a~~l~~~----gai~~~~h----------~~f~l~sG~~S~~~~D~ 41 (211)
T 2aee_A 5 LASQIATQLLDI----KAVYLKPE----------DPFTWASGIKSPIYTDN 41 (211)
T ss_dssp HHHHHHHHHHHT----TSEEECTT----------SCEECGGGCEESEEECG
T ss_pred HHHHHHHHHHHC----CCEEECCC----------CCeEeCCCCcCCeEEeC
Confidence 567788888864 44665421 12445679999999854
No 36
>2fv4_B Hypothetical 24.6 kDa protein in ILV2-ADE17 intergenic region; alpha-beta, complex, coiled-coil, structural protein, protein binding; NMR {Saccharomyces cerevisiae} SCOP: d.300.1.2
Probab=22.87 E-value=13 Score=24.56 Aligned_cols=14 Identities=29% Similarity=0.370 Sum_probs=11.2
Q ss_pred eEecCccccceeeec
Q 032735 98 FKLDWGYSSSCFVTN 112 (135)
Q Consensus 98 ~~fd~GYlSpyfvTd 112 (135)
+.+|.+| |+||.|+
T Consensus 56 v~id~k~-S~fFytn 69 (77)
T 2fv4_B 56 LPLDNNL-SDFYKTK 69 (77)
T ss_dssp EECCCTT-THHHHHH
T ss_pred EEcCCCc-chHHHHH
Confidence 4578888 9999885
No 37
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=22.72 E-value=27 Score=19.20 Aligned_cols=18 Identities=17% Similarity=0.134 Sum_probs=13.9
Q ss_pred cceeeecCCCceEEeecee
Q 032735 106 SSCFVTNKKKKLCFQSSTY 124 (135)
Q Consensus 106 SpyfvTd~~~~~~~l~~p~ 124 (135)
.+||+ |..+.+..+++|.
T Consensus 20 ~~Yy~-nh~t~~ttW~~Pr 37 (38)
T 2law_A 20 EIYYI-NHKNKTTSWLDPR 37 (38)
T ss_dssp EEEEE-ETTTTEEESSCTT
T ss_pred CEEEE-ECCCCCEeCCCCC
Confidence 58998 5577788888885
No 38
>3iis_M PCP, peridinin-chlorophyll A-binding protein 1, chloro; alpha helical, light harvesting protein, photosynthesis, CAR dinoflagellates; HET: CLA PID J7Z; 1.40A {Amphidinium carterae} PDB: 2x20_M* 2x1z_M* 2x21_M* 3iiu_M*
Probab=22.67 E-value=1.2e+02 Score=22.18 Aligned_cols=22 Identities=14% Similarity=0.376 Sum_probs=15.1
Q ss_pred cccCCHHHHHHHHhhccCCChhhhHHHHH
Q 032735 40 QMISTSEEIAQVATTSINGDKDIGALVAR 68 (135)
Q Consensus 40 ~~v~~~~~i~~VAtisan~D~~iG~liae 68 (135)
+-|.+.++-..| +..+|++||.
T Consensus 78 kgvas~aDy~aV-------NaAlgrmIAS 99 (151)
T 3iis_M 78 NGVTSRADWDSV-------NAALGRVIAS 99 (151)
T ss_dssp TTBCCHHHHHHH-------HHHHHHHHHT
T ss_pred cccccHHHHHHH-------HHHHHHHHHc
Confidence 457777777666 3568888874
No 39
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=20.33 E-value=40 Score=18.67 Aligned_cols=18 Identities=11% Similarity=0.038 Sum_probs=13.9
Q ss_pred cceeeecCCCceEEeecee
Q 032735 106 SSCFVTNKKKKLCFQSSTY 124 (135)
Q Consensus 106 SpyfvTd~~~~~~~l~~p~ 124 (135)
-+||+ |..+++..+++|.
T Consensus 21 r~Yy~-nh~t~~ttW~~P~ 38 (40)
T 2ysg_A 21 IKYFI-NHVTQTTSWIHPV 38 (40)
T ss_dssp CEEEE-ESSSCCEECCCCC
T ss_pred CEEEE-ECCCCcCcCCCCC
Confidence 57898 5577788888885
No 40
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=20.05 E-value=39 Score=18.74 Aligned_cols=18 Identities=11% Similarity=0.165 Sum_probs=14.0
Q ss_pred cceeeecCCCceEEeecee
Q 032735 106 SSCFVTNKKKKLCFQSSTY 124 (135)
Q Consensus 106 SpyfvTd~~~~~~~l~~p~ 124 (135)
.+||+ |..+++..+++|.
T Consensus 21 ~~Yy~-nh~t~~ttw~~Pr 38 (40)
T 2ysf_A 21 IPYFV-DHNRRTTTYIDPR 38 (40)
T ss_dssp CEEEE-ETTTCCEESSCTT
T ss_pred CEEEE-ECCCCcEecCCCC
Confidence 68998 5577788888885
Done!