BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032739
(135 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q05462|RL27_PEA 60S ribosomal protein L27 OS=Pisum sativum GN=RPL27 PE=2 SV=1
Length = 135
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 111/135 (82%), Positives = 127/135 (94%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
MVKFLKPNKAV+LLQGRYAG+KAVI+++FDDGTR++PYGHCLVAG+ K+P KV++KDSAK
Sbjct: 1 MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDLKDVINPDVLQTKDKKVTAAKETKRRLEER 120
KTAKKSRVKAF+KLVN HLMPTRYTLDVDLKD + PDVLQ+KDKKVTA KETK+ LEER
Sbjct: 61 KTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEER 120
Query: 121 FKTGKNRWFFSKLRF 135
FKTGKNRWFF+KLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135
>sp|P51419|RL273_ARATH 60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2
SV=2
Length = 135
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/135 (82%), Positives = 120/135 (88%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
MVKFLK NKAV+LLQGRYAG+KAVII+SFDDG RDRPYGHCLVAG+ KYP KV+RKDSAK
Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDLKDVINPDVLQTKDKKVTAAKETKRRLEER 120
KTAKKSRVK FIKLVN HLMPTRYTLDVDLK+V D LQ+KDKKV A KE K +LEER
Sbjct: 61 KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120
Query: 121 FKTGKNRWFFSKLRF 135
FKTGKNRWFF+KLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135
>sp|Q8LCL3|RL272_ARATH 60S ribosomal protein L27-2 OS=Arabidopsis thaliana GN=RPL27B PE=2
SV=2
Length = 135
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/135 (81%), Positives = 120/135 (88%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
MVKFLK NKAV+LLQGRYAG+KAVII+SFDDGT DR YGHCLVAG+ KYP KV+RKDSAK
Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDLKDVINPDVLQTKDKKVTAAKETKRRLEER 120
KTAKKSRVK FIKLVN HLMPTRYTLDVDLK+V D L++KDKKVTA KE K +LEER
Sbjct: 61 KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120
Query: 121 FKTGKNRWFFSKLRF 135
FKTGKNRWFF+KLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135
>sp|P41101|RL27_SOLTU 60S ribosomal protein L27 OS=Solanum tuberosum GN=RPL27 PE=2 SV=1
Length = 138
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/139 (77%), Positives = 123/139 (88%), Gaps = 5/139 (3%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KFLKPNKAV+LLQG+YAGRKAVI+R+FD+GTRDRPYGHCLVAG+++YP KV+RKDSAK
Sbjct: 1 MEKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDL----KDVINPDVLQTKDKKVTAAKETKRR 116
K KKSRVKAFIKLVN +H+MPTRYTLD DL KDV+N DVLQ +DKKVT A+ TK R
Sbjct: 61 KAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVT-ARRTKAR 119
Query: 117 LEERFKTGKNRWFFSKLRF 135
L ERFKTGKNRWFF+KLRF
Sbjct: 120 LAERFKTGKNRWFFTKLRF 138
>sp|Q9SKX8|RL271_ARATH 60S ribosomal protein L27-1 OS=Arabidopsis thaliana GN=RPL27A PE=2
SV=1
Length = 135
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 97/135 (71%), Positives = 117/135 (86%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
MVK +KP KAV+LLQGRY G+KAVI++SFDDGT ++ YGHCLVAG+ KYP KV+RKDSAK
Sbjct: 1 MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDLKDVINPDVLQTKDKKVTAAKETKRRLEER 120
KTAKKSRVK F K++N H+MPTRYTLD+DLK+V++ D + +KDKKVTA KE K + EER
Sbjct: 61 KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120
Query: 121 FKTGKNRWFFSKLRF 135
FKTGKNRWFF+KLRF
Sbjct: 121 FKTGKNRWFFTKLRF 135
>sp|Q02984|RL27_PYRST 60S ribosomal protein L27 OS=Pyrobotrys stellata GN=RPL27 PE=2 SV=1
Length = 134
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/135 (64%), Positives = 102/135 (75%), Gaps = 1/135 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
MVKFLK K VV+L GR+AG+KAVI+R+FDDGT RPYGH LV G+ K P KV ++ S K
Sbjct: 1 MVKFLKSGKVVVVLSGRFAGKKAVIVRNFDDGTSSRPYGHALVVGLQKEPRKVTKRQSQK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDLKDVINPDVLQTKDKKVTAAKETKRRLEER 120
K AKKS +K FIK VN +HLMPTRYTLDVD K V + + KKV A KE K+ LEE+
Sbjct: 61 KQAKKSTLKTFIKTVNYNHLMPTRYTLDVDFKGVA-AEAQENPTKKVEARKECKKLLEEK 119
Query: 121 FKTGKNRWFFSKLRF 135
FKTGKNRWFF+KLRF
Sbjct: 120 FKTGKNRWFFTKLRF 134
>sp|P61359|RL27_HIPCM 60S ribosomal protein L27 OS=Hippocampus comes GN=rpl27 PE=2 SV=2
Length = 136
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/136 (57%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KF+KP K V++L GRYAGRKAVI+++ DDGT DRPY H LVAG+ +YP KV K
Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTAPMGKK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDL-KDVINPDVLQTKDKKVTAAKETKRRLEE 119
K AK+S++KAF+K+ N +HLMPTRY++D+ L K V+N DV + K A +E K + EE
Sbjct: 61 KIAKRSKIKAFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKSKARREAKVKFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
R+KTGKN+WFF KLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>sp|Q7ZV82|RL27_DANRE 60S ribosomal protein L27 OS=Danio rerio GN=rpl27 PE=2 SV=3
Length = 136
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/136 (57%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KF+KP K V++L GRYAGRKAVI+++ DDGT DRPY H LVAG+ +YP KV K
Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTATMGKK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDL-KDVINPDVLQTKDKKVTAAKETKRRLEE 119
K AK+S++KAF+K+ N +HLMPTRY++D+ L K V+N DV + K A +E K + EE
Sbjct: 61 KIAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
R+KTGKN+WFF KLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>sp|Q90YU1|RL27_ICTPU 60S ribosomal protein L27 OS=Ictalurus punctatus GN=rpl27 PE=2 SV=3
Length = 136
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KF+KP K V++L GRYAGRKAVI+++ DDGT DRPY H LV+G+ +YP KV K
Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVSGIDRYPRKVTATMGKK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDL-KDVINPDVLQTKDKKVTAAKETKRRLEE 119
K AK+S++KAF+K+ N +HLMPTRY++D+ L K ++N DV + K A +E K + EE
Sbjct: 61 KVAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTIVNKDVFRDPALKRKARREAKVKFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
R+KTGKN+WFF KLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>sp|P61354|RL27_RAT 60S ribosomal protein L27 OS=Rattus norvegicus GN=Rpl27 PE=2 SV=2
Length = 136
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KF+KP K V++L GRY+GRKAVI+++ DDGT DRPY H LVAG+ +YP KV K
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDL-KDVINPDVLQTKDKKVTAAKETKRRLEE 119
K AK+S++K+F+K+ N +HLMPTRY++D+ L K V+N DV + K A +E K + EE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
R+KTGKN+WFF KLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>sp|A1XQU5|RL27_PIG 60S ribosomal protein L27 OS=Sus scrofa GN=RPL27 PE=2 SV=1
Length = 136
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KF+KP K V++L GRY+GRKAVI+++ DDGT DRPY H LVAG+ +YP KV K
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDL-KDVINPDVLQTKDKKVTAAKETKRRLEE 119
K AK+S++K+F+K+ N +HLMPTRY++D+ L K V+N DV + K A +E K + EE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
R+KTGKN+WFF KLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>sp|P61358|RL27_MOUSE 60S ribosomal protein L27 OS=Mus musculus GN=Rpl27 PE=2 SV=2
Length = 136
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KF+KP K V++L GRY+GRKAVI+++ DDGT DRPY H LVAG+ +YP KV K
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDL-KDVINPDVLQTKDKKVTAAKETKRRLEE 119
K AK+S++K+F+K+ N +HLMPTRY++D+ L K V+N DV + K A +E K + EE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
R+KTGKN+WFF KLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>sp|Q4R8Z4|RL27_MACFA 60S ribosomal protein L27 OS=Macaca fascicularis GN=RPL27 PE=2 SV=1
Length = 136
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KF+KP K V++L GRY+GRKAVI+++ DDGT DRPY H LVAG+ +YP KV K
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDL-KDVINPDVLQTKDKKVTAAKETKRRLEE 119
K AK+S++K+F+K+ N +HLMPTRY++D+ L K V+N DV + K A +E K + EE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
R+KTGKN+WFF KLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>sp|P61353|RL27_HUMAN 60S ribosomal protein L27 OS=Homo sapiens GN=RPL27 PE=1 SV=2
Length = 136
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KF+KP K V++L GRY+GRKAVI+++ DDGT DRPY H LVAG+ +YP KV K
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDL-KDVINPDVLQTKDKKVTAAKETKRRLEE 119
K AK+S++K+F+K+ N +HLMPTRY++D+ L K V+N DV + K A +E K + EE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
R+KTGKN+WFF KLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>sp|P61355|RL27_CHICK 60S ribosomal protein L27 OS=Gallus gallus GN=RPL27 PE=2 SV=2
Length = 136
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KF+KP K V++L GRY+GRKAVI+++ DDGT DRPY H LVAG+ +YP KV K
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDL-KDVINPDVLQTKDKKVTAAKETKRRLEE 119
K AK+S++K+F+K+ N +HLMPTRY++D+ L K V+N DV + K A +E K + EE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
R+KTGKN+WFF KLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>sp|P61357|RL27_CERNI 60S ribosomal protein L27 OS=Cervus nippon GN=RPL27 PE=2 SV=2
Length = 136
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KF+KP K V++L GRY+GRKAVI+++ DDGT DRPY H LVAG+ +YP KV K
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDL-KDVINPDVLQTKDKKVTAAKETKRRLEE 119
K AK+S++K+F+K+ N +HLMPTRY++D+ L K V+N DV + K A +E K + EE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
R+KTGKN+WFF KLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>sp|P61356|RL27_BOVIN 60S ribosomal protein L27 OS=Bos taurus GN=RPL27 PE=2 SV=2
Length = 136
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KF+KP K V++L GRY+GRKAVI+++ DDGT DRPY H LVAG+ +YP KV K
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDL-KDVINPDVLQTKDKKVTAAKETKRRLEE 119
K AK+S++K+F+K+ N +HLMPTRY++D+ L K V+N DV + K A +E K + EE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
R+KTGKN+WFF KLRF
Sbjct: 121 RYKTGKNKWFFQKLRF 136
>sp|Q9XSU7|RL27_CANFA 60S ribosomal protein L27 OS=Canis familiaris GN=RPL27 PE=2 SV=3
Length = 136
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KF+KP K V++L GRY+GRKAVI+++ DDGT DRPY H LVAG+ +YP KV K
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDL-KDVINPDVLQTKDKKVTAAKETKRRLEE 119
K AK+S++K+F+K+ N +HLMPTRY++D+ L K V+N DV + K A +E K + EE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
++KTGKN+WFF KLRF
Sbjct: 121 KYKTGKNKWFFQKLRF 136
>sp|P0C2H6|RL27A_YEAST 60S ribosomal protein L27-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL27A PE=1 SV=1
Length = 136
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KFLK K V+++GRYAG+K VI++ D+G++ P+GH LVAG+ +YP+KV +K AK
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPLKVTKKHGAK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVD-LKDVINPDVLQTKDKKVTAAKETKRRLEE 119
K AK++++K FIK+VN +HL+PTRYTLDV+ K V++ + + ++ A K K+ EE
Sbjct: 61 KVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
R + GKN+WFFSKLRF
Sbjct: 121 RHQAGKNQWFFSKLRF 136
>sp|P0C2H7|RL27B_YEAST 60S ribosomal protein L27-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL27B PE=1 SV=1
Length = 136
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KFLK K V+++GRYAG+K VI++ D+G++ P+GH LVAG+ +YP KV +K AK
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVD-LKDVINPDVLQTKDKKVTAAKETKRRLEE 119
K AK++++K FIK+VN +HL+PTRYTLDV+ K V++ + + ++ A K K+ EE
Sbjct: 61 KVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
R + GKN+WFFSKLRF
Sbjct: 121 RHQAGKNQWFFSKLRF 136
>sp|O74538|RL27B_SCHPO 60S ribosomal protein L27-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl27b PE=3 SV=1
Length = 136
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 96/136 (70%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
MVK LKP K ++ +GR+AG+K VI+++ D G++ P+GH +VAGV +YP+KV + AK
Sbjct: 1 MVKILKPGKVALVTRGRFAGKKVVILQNVDQGSKSHPFGHAVVAGVERYPLKVTKSMGAK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVD-LKDVINPDVLQTKDKKVTAAKETKRRLEE 119
+ AK+SRVK FIK++N +HLMPTRY L++D LK ++ P ++ A K K EE
Sbjct: 61 RIAKRSRVKPFIKVINYNHLMPTRYALELDNLKGLVTPTTFSEPSQRSAAKKTVKNTFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
+++TGK+ WFF+ LRF
Sbjct: 121 KYQTGKSAWFFTPLRF 136
>sp|O14388|RL27A_SCHPO 60S ribosomal protein L27-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl27a PE=2 SV=2
Length = 136
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 98/136 (72%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
MVK LKP K ++ +GR+AG+K VI+++ D G++ P+GH +VAGV +YP+KV + AK
Sbjct: 1 MVKILKPGKVALITRGRFAGKKVVILQAIDQGSKSHPFGHAVVAGVERYPLKVTKSMGAK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVD-LKDVINPDVLQTKDKKVTAAKETKRRLEE 119
+ A++SRVK FIK+VN +HLMPTRY L++D LK +I D + ++ A K K+ EE
Sbjct: 61 RIARRSRVKPFIKVVNYNHLMPTRYALELDNLKGLITADTFKEPTQRSAARKTVKKTFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
++++GK+ WFF+ LRF
Sbjct: 121 KYQSGKSAWFFTPLRF 136
>sp|P91914|RL27_CAEEL 60S ribosomal protein L27 OS=Caenorhabditis elegans GN=rpl-27 PE=2
SV=1
Length = 136
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 98/136 (72%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M K +KP K V++L+G+YAGRKAV+++ D+G DR Y H ++AG+ +YP+KV + K
Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVDL-KDVINPDVLQTKDKKVTAAKETKRRLEE 119
K K++++K F+K+V+ +HL+PTRY++DV K IN + L+ KK A E K + EE
Sbjct: 61 KIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
R+KTGKN+WFF+KLRF
Sbjct: 121 RYKTGKNKWFFTKLRF 136
>sp|Q55BE6|RL27_DICDI 60S ribosomal protein L27 OS=Dictyostelium discoideum GN=rpl27 PE=3
SV=1
Length = 144
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 93/142 (65%), Gaps = 10/142 (7%)
Query: 3 KFLKPNKAVVLLQGRYAGRKAVIIRSFDDGT--RDRPYGHCLVAGVAKYPVKVVRKDSAK 60
KF+KP + V+LL G+YAGRKAV+I++FDD T + RPYGHCLVAG+ KYP +VR S K
Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPRSIVRSMSRK 63
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLD-------VDLKDVINPDVLQTKDKKVTAAKET 113
K++ +++F+K+VN +H+MPTRY + LK+ + + Q K+
Sbjct: 64 TILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQV-AKRAHTRLAV 122
Query: 114 KRRLEERFKTGKNRWFFSKLRF 135
K+ E + K GK++WFFSKLRF
Sbjct: 123 KKIFEAKHKAGKSKWFFSKLRF 144
>sp|Q9P843|RL27_CANAX 60S ribosomal protein L27 OS=Candida albicans GN=RPL27 PE=2 SV=1
Length = 136
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 94/136 (69%), Gaps = 1/136 (0%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KF+K K ++++GRYAG+K VI++ D+GT+ P+ H +VAG+ + P+KV +K AK
Sbjct: 1 MAKFIKSGKVAIVVRGRYAGKKVVIVKPHDEGTKSHPFPHAIVAGIERAPLKVTKKMDAK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLDVD-LKDVINPDVLQTKDKKVTAAKETKRRLEE 119
K K+++VK F+KLVN +HLMPTRY+LDV+ K + + L+ ++ A K K+ EE
Sbjct: 61 KVTKRTKVKPFVKLVNYNHLMPTRYSLDVESFKSAVTSEALEEPSQREEAKKVVKKAFEE 120
Query: 120 RFKTGKNRWFFSKLRF 135
+ + GKN+WFF KL F
Sbjct: 121 KHQAGKNKWFFQKLHF 136
>sp|P0DJ19|RL27_TETTH 60S ribosomal protein L27 OS=Tetrahymena thermophila GN=RPL27 PE=1
SV=1
Length = 144
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 97/146 (66%), Gaps = 13/146 (8%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVRKDSAK 60
M KFLK + V+LLQGR+AG+KAVI++S +DGT+DR +GH LVAGV + P KV ++ +K
Sbjct: 1 MAKFLKYGRVVILLQGRFAGKKAVIVKSSEDGTKDRKFGHVLVAGVERSPKKVTKRMGSK 60
Query: 61 KTAKKSRVKAFIKLVNQSHLMPTRYTLD--VDLKDVINPDVLQTKDKKVTAAKET-KRRL 117
K K++ VK FIK VN +H+MPTRY++ D K+++ D ++ K + ++T K+
Sbjct: 61 KIQKRTSVKPFIKYVNLNHIMPTRYSVKELCDFKELVKEDKIKNNAK--SEVRDTLKKVF 118
Query: 118 EERFKT--------GKNRWFFSKLRF 135
E+++T ++FFSKLRF
Sbjct: 119 VEKYRTINPEEKSASHTKFFFSKLRF 144
>sp|O67914|UPP_AQUAE Uracil phosphoribosyltransferase OS=Aquifex aeolicus (strain VF5)
GN=upp PE=1 SV=1
Length = 208
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 80 LMPTRYTLDVDLKDVINPDVLQTKDKKVTAAKETKRRLEERFK 122
++ T TL+V L++++ L+ K AA E +R+EE+FK
Sbjct: 130 MLATGGTLEVALREILKHSPLKVKSVHAIAAPEGLKRIEEKFK 172
>sp|Q54D63|RL6_DICDI 60S ribosomal protein L6 OS=Dictyostelium discoideum GN=rpl6 PE=1
SV=1
Length = 236
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 3 KFLKPNKAVVLLQGRYAGRKAVIIRSFDDG 32
K + P +++L GR+AG++ V ++ D G
Sbjct: 89 KSITPGTVLIILAGRFAGKRVVALKQLDSG 118
>sp|Q84V83|LAR_DESUN Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1
SV=1
Length = 382
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 12/111 (10%)
Query: 16 GRYAGRKAVIIRSFDDGTRDRPYG-----HCLVAGVAKYPVKVVRK--DSAKKTAKKSRV 68
G + KAVII++F D YG C+ + +Y + VV A+ + + +
Sbjct: 46 GPVSPSKAVIIKTFQDKGAKVIYGVINDKECMEKILKEYEIDVVISLVGGARLLDQLTLL 105
Query: 69 KAFIKLVNQSHLMPTRYTLDVDLKDVINPDVLQTKDKKVTAAKETKRRLEE 119
+A + +P+ + DVD D + P + K+K++ +R +EE
Sbjct: 106 EAIKSVKTIKRFLPSEFGHDVDRTDPVEPGLTMYKEKRL-----VRRAVEE 151
>sp|A4WH36|RL14E_PYRAR 50S ribosomal protein L14e OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=rpl14e PE=3 SV=1
Length = 103
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDD 31
MVK + + VV + GR AGRKAV++ D+
Sbjct: 1 MVKVIDIGRVVVKVLGREAGRKAVVVDVVDE 31
>sp|Q8YA32|INLI_LISMO Internalin-I OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlI PE=4 SV=1
Length = 1778
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 19 AGRKAVIIRSFD-DGTRDRPYGHCLVAGVAKYPVKVVRKDSAKKTAKKSRVK--AFIKLV 75
AG V + S + DG P ++ V K + + ++A++ K +++ F+K V
Sbjct: 1071 AGDYTVTLNSINSDGVAGTPTA--IIVHVEKEKIATISTNTAQQYEKYAKINETQFLKDV 1128
Query: 76 NQS-HLMPTRYTLDVDLKDVINPDVLQTKDKKVTAAKE 112
+ S + PT L+ D + V+ DV T +TA E
Sbjct: 1129 HASINASPTTAVLESDFETVVKLDVPGTYTVTITATNE 1166
>sp|B1YA63|RL14E_PYRNV 50S ribosomal protein L14e OS=Pyrobaculum neutrophilum (strain
DSM 2338 / JCM 9278 / V24Sta) GN=rpl14e PE=3 SV=1
Length = 103
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDD 31
MVK + + VV + GR AGRKAV++ D+
Sbjct: 1 MVKVIDVGRVVVKVLGREAGRKAVVVDIVDE 31
>sp|A3MS76|RL14E_PYRCJ 50S ribosomal protein L14e OS=Pyrobaculum calidifontis (strain
JCM 11548 / VA1) GN=rpl14e PE=3 SV=1
Length = 103
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDD 31
MVK + + VV + GR AGRKAV++ D+
Sbjct: 1 MVKVIDVGRVVVKVLGREAGRKAVVVDIVDE 31
>sp|Q8ZYB4|RL14E_PYRAE 50S ribosomal protein L14e OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl14e PE=3 SV=1
Length = 103
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDD 31
MVK + + VV + GR AGRKAV++ D+
Sbjct: 1 MVKVIDIGRVVVKVLGREAGRKAVVVDIVDE 31
>sp|A1RTL6|RL14E_PYRIL 50S ribosomal protein L14e OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=rpl14e PE=3 SV=1
Length = 103
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 1 MVKFLKPNKAVVLLQGRYAGRKAVIIRSFDD 31
MVK + + VV + GR AGRKAV++ D+
Sbjct: 1 MVKVIDIGRVVVKVLGREAGRKAVVVDIVDE 31
>sp|Q3YT72|MNME_EHRCJ tRNA modification GTPase MnmE OS=Ehrlichia canis (strain Jake)
GN=mnmE PE=3 SV=1
Length = 441
Score = 28.9 bits (63), Expect = 8.9, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 10/105 (9%)
Query: 6 KPNKAVVLLQGRYAGRKAVIIRSFDDGTRDRPYGHCLVAGVAKYPVKVVR----KDSAKK 61
+PN L A R I+ + TRD H VAG YP+ ++ +DSA
Sbjct: 221 EPNSGKSTLFNHLAKRDIAIVSEYAGTTRDTLEAHIDVAG---YPIVIIDTAGIRDSADL 277
Query: 62 TAKKSRVKAFIKLVNQSHLMPTRYTLDVDLKDVINPDVLQTKDKK 106
++ +A +K N + L + ++V N +++ D+K
Sbjct: 278 IEQEGIRRAKLKAENADFKI---VMLPYEKRNVFNNEIMNLIDEK 319
>sp|Q723X5|INLI_LISMF Internalin-I OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlI PE=3 SV=1
Length = 1775
Score = 28.9 bits (63), Expect = 9.1, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 19 AGRKAVIIRSFD-DGTRDRPYGHCLVAGVAKYPVKVVRKDSAKKTAKKSRVK--AFIKLV 75
AG V + S + DG P ++ V K + + ++A++ K + + F+K V
Sbjct: 1068 AGDYTVTLNSINSDGVASTPTA--IIVHVEKEKIATISANTAQQYEKYAEINETQFLKDV 1125
Query: 76 NQS-HLMPTRYTLDVDLKDVINPDVLQTKDKKVTAAKE 112
+ S + PT L+ D + V+ DV T +TA E
Sbjct: 1126 HASINASPTTAVLESDFETVVKLDVPGTYTVTITATNE 1163
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,759,859
Number of Sequences: 539616
Number of extensions: 1701395
Number of successful extensions: 5878
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 5805
Number of HSP's gapped (non-prelim): 61
length of query: 135
length of database: 191,569,459
effective HSP length: 100
effective length of query: 35
effective length of database: 137,607,859
effective search space: 4816275065
effective search space used: 4816275065
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)