BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032742
(135 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P46379|BAG6_HUMAN Large proline-rich protein BAG6 OS=Homo sapiens GN=BAG6 PE=1 SV=2
Length = 1132
Score = 36.2 bits (82), Expect = 0.063, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 5 EISESVEITVKTIGPAPPSRLSVSSPIKVRDLRKLIATSSANHLPIENLRLVFRGKVLDD 64
E +S+E+ VKT+ + + V + + V++ ++ IA S + +P E RL+++G+VL
Sbjct: 12 EEPDSLEVLVKTLDSQTRTFI-VGAQMNVKEFKEHIAASVS--IPSEKQRLIYQGRVL-- 66
Query: 65 TQDDDDRDDVYLQLSN-GDSVIAAVKPKPPPRHL 97
+DD LQ N G VI V+ PP HL
Sbjct: 67 ------QDDKKLQEYNVGGKVIHLVERAPPQTHL 94
>sp|Q40742|RAD23_ORYSJ Probable DNA repair protein RAD23 OS=Oryza sativa subsp. japonica
GN=RAD23 PE=1 SV=2
Length = 392
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 10 VEITVKTIGPAPPSRLSVSSPIKVRDLRKLIATSSANHL-PIENLRLVFRGKVL-DDTQD 67
++I+VKT+ ++ V S KV D++++I T+ H+ P E L+ +GKVL DDT
Sbjct: 1 MKISVKTLK-GSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTL 59
Query: 68 DDDR 71
D+++
Sbjct: 60 DENK 63
>sp|A5D9M6|BAG6_PIG Large proline-rich protein BAG6 OS=Sus scrofa GN=BAG6 PE=2 SV=1
Length = 1128
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 5 EISESVEITVKTIGPAPPSRLSVSSPIKVRDLRKLIATSSANHLPIENLRLVFRGKVLDD 64
E ES+E+ VKT+ + + V + + V++ ++ IA S + +P E RL+++G+VL
Sbjct: 12 EEPESLEVLVKTLDSQTRTFI-VGAQMNVKEFKEHIAASVS--IPSEKQRLIYQGRVL-- 66
Query: 65 TQDDDDRDDVYLQLSN-GDSVIAAVKPKPPPRHL 97
+DD LQ N G VI V+ PP L
Sbjct: 67 ------QDDKKLQEYNVGGKVIHLVERAPPQTQL 94
>sp|Q9Z1R2|BAG6_MOUSE Large proline-rich protein BAG6 OS=Mus musculus GN=Bag6 PE=1 SV=1
Length = 1154
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 5 EISESVEITVKTIGPAPPSRLSVSSPIKVRDLRKLIATSSANHLPIENLRLVFRGKVLDD 64
E +S+E+ VKT+ + + V + + V++ ++ IA S + +P E RL+++G+VL
Sbjct: 12 EEPDSLEVLVKTLDSQTRTFI-VGAQMNVKEFKEHIAASVS--IPSEKQRLIYQGRVL-- 66
Query: 65 TQDDDDRDDVYLQLSN-GDSVIAAVKPKPPPRHL 97
+DD LQ N G VI V+ PP L
Sbjct: 67 ------QDDKKLQEYNVGGKVIHLVERAPPQTQL 94
>sp|Q6MG49|BAG6_RAT Large proline-rich protein BAG6 OS=Rattus norvegicus GN=Bag6 PE=2
SV=2
Length = 1146
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 5 EISESVEITVKTIGPAPPSRLSVSSPIKVRDLRKLIATSSANHLPIENLRLVFRGKVLDD 64
E +S+E+ VKT+ + + V + + V++ ++ IA S + +P E RL+++G+VL
Sbjct: 12 EEPDSLEVLVKTLDSQTRTFI-VGAQMNVKEFKEHIAASVS--IPSEKQRLIYQGRVL-- 66
Query: 65 TQDDDDRDDVYLQLSNGDSVIAAVKPKPPPRHL 97
QDD D + G VI V+ PP L
Sbjct: 67 -QDDKKLQDYNV----GGKVIHLVERAPPQTQL 94
>sp|P48510|DSK2_YEAST Ubiquitin domain-containing protein DSK2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DSK2 PE=1
SV=2
Length = 373
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 41 ATSSANHLPIENLRLVFRGKVLDDTQDDDDRDDVYLQLSNGDSV-IAAVKPKP 92
A + AN +P+ N RL++ GK+L +DD + ++Q +G SV + +PKP
Sbjct: 30 AINKANGIPVANQRLIYSGKIL---KDDQTVESYHIQ--DGHSVHLVKSQPKP 77
>sp|A7X5R6|BAG6_ORNAN Large proline-rich protein BAG6 OS=Ornithorhynchus anatinus
GN=BAG6 PE=3 SV=1
Length = 1088
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 12/85 (14%)
Query: 10 VEITVKTIGPAPPSRLSVSSPIKVRDLRKLIATSSANHLPIENLRLVFRGKVLDDTQDDD 69
+E++VKT+ + +V + + V++ ++ IA +A +P + RL+++G+VL
Sbjct: 24 LEVSVKTLD-SQTRTFTVGAEMTVKEFKEHIA--AAVSIPPDKQRLIYQGRVL------- 73
Query: 70 DRDDVYLQLSN-GDSVIAAVKPKPP 93
+DD LQ N G VI V+ PP
Sbjct: 74 -QDDKKLQEYNVGGKVIHLVERAPP 97
>sp|Q5SPD7|P5CR3_DANRE Pyrroline-5-carboxylate reductase 3 OS=Danio rerio GN=pycrl PE=2
SV=1
Length = 288
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/108 (19%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Query: 1 MGMGEISESVEITVKTIGPAPPSRLSVSSPIKVRDL----RKLIATSSANHLPIENLRLV 56
+G G ++ V + G PPS + +S+P + +L K ++ + +NH + RL+
Sbjct: 24 IGAGNMAFGVAQGIIASGKVPPSNIIISAP-SMNNLPRFKEKGVSVTHSNHEVVGGSRLI 82
Query: 57 FRG-------KVLDDTQDDDDRDDVYLQLSNGDSVIAAVKPKPPPRHL 97
F +VL + + ++ + + ++ G ++ + P H+
Sbjct: 83 FLAVKPHIIPQVLKEISQEVTKEHIIVSMAAGITIATLEELLPAGTHV 130
>sp|B2KB67|FOLD_ELUMP Bifunctional protein FolD OS=Elusimicrobium minutum (strain Pei191)
GN=folD PE=3 SV=1
Length = 288
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 59 GKVLDDTQDDDDRD--DVYLQLSNGDSVIAAVKPKPPPRHLR 98
G+V+D T+ + ++ +LS ++V A + PKP PRHL
Sbjct: 62 GEVIDITEQTSHEEMLNIIKKLSTDETVDAVIVPKPLPRHLN 103
>sp|Q19KS6|UBL4B_MONDO Ubiquitin-like protein 4B OS=Monodelphis domestica GN=UBL4B PE=2
SV=1
Length = 181
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 25 LSVSSPIKVRDLRKLIATSSANHLPIENLRLVFRGKVLDDTQDDDD 70
L VS KV L++L+ S H+P + RL+FRG+VL D + D
Sbjct: 15 LQVSENEKVFMLKRLV--SKQLHVPEKQQRLLFRGQVLADNKRLSD 58
>sp|E1C1R4|UBP47_CHICK Ubiquitin carboxyl-terminal hydrolase 47 OS=Gallus gallus GN=USP47
PE=3 SV=1
Length = 1375
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 4 GEISESVEIT-VKTIGPAPPSRLSVSSPIKVRDLRKLIATSSANHLPIENLRLVF 57
GE+ V + +KT APP + V + ++LI S A HLP E +R+V
Sbjct: 711 GEVMVKVHVVDLKTESVAPPISVRAYLNQTVSEFKQLI--SKATHLPAETMRVVL 763
>sp|Q5F2N3|FUT10_DANRE Alpha-(1,3)-fucosyltransferase 10 OS=Danio rerio GN=fut10 PE=2 SV=3
Length = 458
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 28/70 (40%)
Query: 39 LIATSSANHLPIENLRLVFRGKVLDDTQDDDDRDDVYLQLSNGDSVIAAVKPKPPPRHLR 98
L+ S NHL +V+ D D D +Q DS + K P HLR
Sbjct: 180 LLPLSYKNHLRQTLAPVVYVQSDCDPPSDRDTYIRELMQHIQVDSYGQCLHNKDLPPHLR 239
Query: 99 DDTCIDDDDL 108
D T +DD D
Sbjct: 240 DSTAMDDQDF 249
>sp|Q6MSL3|FOLD_MYCMS Bifunctional protein FolD OS=Mycoplasma mycoides subsp. mycoides SC
(strain PG1) GN=folD PE=3 SV=2
Length = 288
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Query: 11 EITVKTIGPAPPSRLSVSSPIKVRDLRKLIATSSANHLPIENLRLVFRGKVLDDTQDDDD 70
++ V IG P S L VS+ IK + N + IE++ L F + + D
Sbjct: 33 KLAVILIGNDPASELYVSNKIK-----------ACNLVGIESVLLRFGQNITSEMLSDQI 81
Query: 71 RDDVYLQLSNGDSVIAAVKPKPPPRHL 97
QL+N +SV A + P P+HL
Sbjct: 82 N-----QLNNDNSVDAILLQLPLPKHL 103
>sp|P25390|SSK22_YEAST Serine/threonine-protein kinase SSK22 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SSK22 PE=1 SV=2
Length = 1331
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 58 RGKVLDDTQDDDDRDDVYLQLSNGDSV-------IAAVKPKPPPRHLRDDTCIDDDDLDL 110
RG L + ++DD DD ++LSNGD + + P R +R D+ D+L
Sbjct: 90 RGIKLTNRYEEDDGDDEIIRLSNGDRIDEDLHSGVKFFSTTPYCRKMRSDS----DELAW 145
Query: 111 FKLPQSTSRWKRKL 124
++ +W+ L
Sbjct: 146 NEIATERFKWQSML 159
>sp|Q2J6U3|DNLJ_FRASC DNA ligase OS=Frankia sp. (strain CcI3) GN=ligA PE=3 SV=1
Length = 706
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 10 VEITVKTIGPAPPSRLSVSSPIKVRDLRKLIATSSANHLPIENLRLVFRGKVLDDTQDDD 69
V ++++ +GP L+ ++R L + ATS+ + +E + G VLD D+
Sbjct: 527 VGLSIRHVGPTAARALAR----ELRSLEAIAATSAEDLAAVEGVGPKIAGAVLDWFADER 582
Query: 70 DRDDVYLQLSNGDSVIAAVKPKPPPRHLRDDTCI 103
R D+ +++ G + +A V + PR L T +
Sbjct: 583 HR-DILARIAAGGARLADVGAEEGPRPLDGVTVV 615
>sp|Q5K4R0|MAD47_ORYSJ MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica
GN=MADS47 PE=1 SV=2
Length = 246
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 51 ENLRL-----VFRGKVLDDTQDDDDRDDVYLQLSNGDSVIAAVKPKPPP 94
ENLRL V R +++ Q D + VY + + +SV A P+PPP
Sbjct: 182 ENLRLKEQLQVSRMSRMEEMQPGPDSEIVYEEGQSSESVTNASYPRPPP 230
>sp|Q6FSM8|FYV8_CANGA Protein FYV8 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=FYV8 PE=3 SV=1
Length = 767
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 23 SRLSVSSPIKVRDLRKLIATSSANHLPIENLR 54
++LS + + RDL K+I+++S + + +ENLR
Sbjct: 641 NKLSEQNTMPTRDLNKIISSNSTHAIKLENLR 672
>sp|Q8BWR4|UBP40_MOUSE Ubiquitin carboxyl-terminal hydrolase 40 OS=Mus musculus GN=Usp40
PE=1 SV=2
Length = 1235
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%)
Query: 17 IGPAPPSRLSVSSPIKVRDLRKLIATSSANHLPIENLRLVFRGKVLDDTQDDDDRDDVYL 76
I P + V + VRD K++ S I +LR + + ++D L
Sbjct: 853 IHPGAEMDIIVEETLSVRDCLKIMLEKSGQQGEIWHLRKMDWCYEAGEPLCEEDATLKEL 912
Query: 77 QLSNGDSVIAAVKPKPPPRHLR 98
+ +GD+++ PPP HL+
Sbjct: 913 MIRSGDTLLLTEGKLPPPGHLK 934
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,604,216
Number of Sequences: 539616
Number of extensions: 2098345
Number of successful extensions: 7843
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 7795
Number of HSP's gapped (non-prelim): 79
length of query: 135
length of database: 191,569,459
effective HSP length: 100
effective length of query: 35
effective length of database: 137,607,859
effective search space: 4816275065
effective search space used: 4816275065
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)