BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032748
(134 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZS51|PMP22_ARATH Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana GN=PMP22
PE=1 SV=1
Length = 190
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 88/115 (76%)
Query: 2 SDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYGF 61
S K ++YL QLQ HPLRTKAITAG+L+G SD ++QK+SG++K+QL R+LL + +
Sbjct: 4 SPPKKTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAG 63
Query: 62 AYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVE 116
+ GP GHF H +D FKGKKD +TVAKKV+LEQLT SP N+ LFM+YYG+V+E
Sbjct: 64 GFLGPAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIE 118
>sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum
GN=DDB_G0290631 PE=3 SV=1
Length = 185
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 6 KEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKI----SGVKKLQLTRLLLLMFYGF 61
K A YL QL +P+ TKA+T+G L SD++ Q I KK R + + +GF
Sbjct: 9 KLAQSHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGF 68
Query: 62 AYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEG 117
A GP H+ K +D F KK + K+ ++Q+ SP NFLF G ++EG
Sbjct: 69 AVTGPLFHYWFKYLDKHFP-KKSYRHAFIKLTIDQVVCSPVFNFLFFSGMG-ILEG 122
>sp|Q54XX9|PX24B_DICDI PXMP2/4 family protein 2 OS=Dictyostelium discoideum
GN=DDB_G0278529 PE=3 SV=1
Length = 193
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 6 KEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKIS-------GVKKLQLTRLLLLMF 58
++ W YL L HPL TK+++ G L G D +AQ++ KL R+ +
Sbjct: 2 RKLWGLYLGLLDNHPLVTKSLSTGFLMGTGDILAQRLEHKFKDEKSQFKLDYKRVATMST 61
Query: 59 YGFAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSP 101
G Y GP H+ ++ +DI+ KG + + + KK+L++QL +P
Sbjct: 62 VGIFYSGPMLHYWYRSLDIMVKG-EGRSVIIKKMLIDQLLFAP 103
>sp|Q66GV0|MPV17_XENLA Protein Mpv17 OS=Xenopus laevis GN=mpv17 PE=2 SV=2
Length = 177
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 9 WRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKI---SGVKKLQLTRLLLLMFYGFAYGG 65
WR Y L HP + + +TAG L G D I+Q++ G+K + R + +M GF + G
Sbjct: 5 WRAYQRLLGAHPWKVQIVTAGSLVGVGDVISQQLLERKGLKGHSIERTVKMMGIGFCFVG 64
Query: 66 PFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSP 101
P +K++D I G K KK+LL+Q+ +P
Sbjct: 65 PVVGGWYKILDRIIPG-SGKPVALKKMLLDQVAFAP 99
>sp|Q54GD8|PX24C_DICDI PXMP2/4 family protein 3 OS=Dictyostelium discoideum
GN=DDB_G0290223 PE=3 SV=1
Length = 184
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 12 YLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYGFAYGGPFGHFL 71
Y+ +L+ P++TKA+T+ L+ S +AQK KK+ ++ +G P H+
Sbjct: 17 YMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWGLI-SSPLVHYW 75
Query: 72 HKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLF 107
H ++D +FK KDK K++++QL +P+ N F
Sbjct: 76 HIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAF 111
>sp|Q07066|PXMP2_RAT Peroxisomal membrane protein 2 OS=Rattus norvegicus GN=Pxmp2 PE=1
SV=2
Length = 194
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 69/123 (56%), Gaps = 9/123 (7%)
Query: 1 MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKK-----LQLTRLLL 55
+ + K A +YL+ L+ +P+ TKA+++GIL+ + +AQ I +K L+++ LL
Sbjct: 14 LRSLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLR 73
Query: 56 LMFYGFAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGL-V 114
+ YG GP H+L+ M+ + V K++LL++L +P FL + ++ + +
Sbjct: 74 YLVYGLFVTGPLSHYLYLFMEYWVPPEVPWARV-KRLLLDRLFFAP--TFLLLFFFVMNL 130
Query: 115 VEG 117
+EG
Sbjct: 131 LEG 133
>sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3
Length = 196
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 1 MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKI-------SGVKKLQLTRL 53
+ + + A +YL L+++P+ TKA T+GIL+ + +AQ I + +KL ++
Sbjct: 14 LGPLPRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGP 73
Query: 54 LLLMFYGFAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSP 101
L YGF + GP GHF + LM+ + + K++LL++L +P
Sbjct: 74 LRYAIYGFFFTGPLGHFFYLLMERWIPSEVPLAGI-KRLLLDRLLFAP 120
>sp|P19258|MPV17_MOUSE Protein Mpv17 OS=Mus musculus GN=Mpv17 PE=2 SV=1
Length = 176
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 9 WRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKI---SGVKKLQLTRLLLLMFYGFAYGG 65
WR Y L HP + + +TAG L G D I+Q++ G+++ Q R L ++ G + G
Sbjct: 4 WRAYQRALAAHPWKVQVLTAGSLMGVGDMISQQLVERRGLQQHQAGRTLTMVSLGCGFVG 63
Query: 66 PFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSP 101
P +K++D + G K KK+LL+Q +P
Sbjct: 64 PVVGGWYKVLDHLIPGTT-KVHALKKMLLDQGGFAP 98
>sp|Q5TZ51|MPV17_DANRE Protein Mpv17 OS=Danio rerio GN=mpv17 PE=2 SV=1
Length = 177
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 9 WRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKI---SGVKKLQLTRLLLLMFYGFAYGG 65
WR Y + HP + + ITAG L G D I+Q++ G+ R +M GF + G
Sbjct: 5 WRSYQALMAKHPWKVQIITAGSLVGVGDVISQQLIERRGLANHNARRTAKMMSIGFFFVG 64
Query: 66 PFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSP 101
P +K++D + G K KK+L++Q+ +P
Sbjct: 65 PVVGGWYKVLDKLVTGGT-KSAALKKMLVDQVGFAP 99
>sp|Q5BK62|MPV17_RAT Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1
Length = 176
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 9 WRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKI---SGVKKLQLTRLLLLMFYGFAYGG 65
WR Y L HP + + +TAG L G D I+Q++ G+++ Q R L + G + G
Sbjct: 4 WRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQQHQTGRTLTMASLGCGFVG 63
Query: 66 PFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEGVAVRFNF 124
P ++++D + G K KK+LL+Q +P F+ G V+ G++ + N+
Sbjct: 64 PVVGGWYRVLDHLIPGTT-KVNALKKMLLDQGGFAPCFLGCFLPLVG-VLNGMSAQDNW 120
>sp|P39210|MPV17_HUMAN Protein Mpv17 OS=Homo sapiens GN=MPV17 PE=1 SV=1
Length = 176
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 9 WRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKI---SGVKKLQLTRLLLLMFYGFAYGG 65
WR Y L HP + + +TAG L G D I+Q++ G+++ Q R L ++ G + G
Sbjct: 4 WRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQRGRTLTMVSLGCGFVG 63
Query: 66 PFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSP 101
P +K++D G K KK+LL+Q +P
Sbjct: 64 PVVGGWYKVLDRFIPGTT-KVDALKKMLLDQGGFAP 98
>sp|Q2KIN6|MPV17_BOVIN Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1
Length = 176
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 9 WRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKI---SGVKKLQLTRLLLLMFYGFAYGG 65
WR Y L HP + + +TAG L G D I+Q++ G++ Q R L + G + G
Sbjct: 4 WRAYQRALTAHPWKVQVLTAGSLMGLGDVISQQLVERRGLQAHQAGRTLTMASLGCGFVG 63
Query: 66 PFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSP 101
P ++++D + G K KK+LL+Q +P
Sbjct: 64 PVVGGWYRVLDRLIPGTT-KVDALKKMLLDQGGFAP 98
>sp|Q9NR77|PXMP2_HUMAN Peroxisomal membrane protein 2 OS=Homo sapiens GN=PXMP2 PE=1 SV=3
Length = 195
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 1 MSDVAKEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTR------LL 54
+ + + A +YL+ L+++P+ TKA T+GIL+ + +AQ I +K + +R L
Sbjct: 14 LGALPRRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPL 73
Query: 55 LLMFYGFAYGGPFGHFLHKLMD 76
YGF + GP HF + M+
Sbjct: 74 RYAVYGFFFTGPLSHFFYFFME 95
>sp|P42925|PXMP2_MOUSE Peroxisomal membrane protein 2 OS=Mus musculus GN=Pxmp2 PE=2 SV=2
Length = 194
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 62/112 (55%), Gaps = 10/112 (8%)
Query: 23 TKAITAGILAGCSDAIAQKISGVKK-----LQLTRLLLLMFYGFAYGGPFGHFLHKLMDI 77
TKA+++GIL+ + +AQ I ++ L+++ LL + YG GP H+L+ M+
Sbjct: 36 TKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLRYLVYGLFVTGPLSHYLYLFMEY 95
Query: 78 IFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYYGL-VVEGVAVRFNFVGKI 128
+ +V K++LL++L +P FL + ++ + ++EG V FV K+
Sbjct: 96 SVPPEVPWASV-KRLLLDRLFFAP--TFLLLFFFVMNLLEGKNVSV-FVAKM 143
>sp|O14142|SYM1_SCHPO Protein sym1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sym1 PE=3 SV=1
Length = 206
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 11 KYLIQLQVHPLRTKAITAGILAGCSDAIAQKIS----------GVKKLQLT--------- 51
+Y + P+ T +TAG L G SDA+AQ ++ G+ ++L
Sbjct: 8 RYNALFEKAPIMTMCLTAGTLGGISDAVAQGLTIYQTNKNAMIGLDGVRLNTHPEIPSIK 67
Query: 52 RLLLLMFYGFAYGGPFGHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPWNNFLFMMYY 111
R+L + +GFA PF +L+ F +K V K+VLL+Q +P+ F +
Sbjct: 68 RVLQFVTFGFAI-SPFQFRWLRLLSAKFPIEKGAINVVKRVLLDQAVFAPFGTAFFFSWM 126
Query: 112 GLVVEGVAVR 121
L EG R
Sbjct: 127 TL-AEGKGFR 135
>sp|Q6DIY8|M17L2_XENTR Mpv17-like protein 2 OS=Xenopus tropicalis GN=mpv17l2 PE=2 SV=1
Length = 222
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 23 TKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYGFAYG---GPFGHFLHKLMDIIF 79
T ++ G+L G D+I Q + + R L FA G GP HF + +D F
Sbjct: 28 TNTVSCGLLLGIGDSIQQSREVRRDPERKRDWLRTGRMFAIGCSMGPLMHFWYSWLDRSF 87
Query: 80 KGKKDKKTVAKKVLLEQLTSSP 101
G+ V +KVL++QL +SP
Sbjct: 88 PGR-GITVVMRKVLIDQLVASP 108
>sp|Q7SCY7|SYM1_NEUCR Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sym-1
PE=3 SV=2
Length = 172
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 12 YLIQLQVHPLRTKAITAGILAGCSDAIAQKI---SGVKKLQLTRLLLLMFYGFAYGGPFG 68
Y QL PL T+A+T IL G D AQ++ G+ LTR ++ YG A GP
Sbjct: 5 YKAQLAARPLLTQAVTTSILFGVGDVAAQQLVDRRGLSNHDLTRTGRMVLYGGAVFGPAA 64
Query: 69 ----HFLHKLMDIIFKGKKDKKTVAK 90
FL K ++ G +K +A+
Sbjct: 65 TTWFRFLQK--RVVVPGSTNKTILAR 88
>sp|Q7YWV6|MPV17_CAEEL Mpv17-like protein OS=Caenorhabditis elegans GN=T18D3.9 PE=3 SV=1
Length = 181
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 15 QLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYGFAYGGPFGHFLHKL 74
+L +PL T+ AG ++G D +AQ +S ++ R F + P +L
Sbjct: 10 RLATNPLSTQMCIAGTISGSGDCLAQYLSHNQEWDRWRTARFSFLSSCFMAPSLFIWFRL 69
Query: 75 MDIIFKGKKDKKTVAKKVLLEQLTSSP 101
++ + KG + KK+ ++QL SP
Sbjct: 70 LEKV-KGNNKSLLLVKKLCIDQLCFSP 95
>sp|Q6BMY0|SYM1_DEBHA Protein SYM1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=SYM1 PE=3 SV=1
Length = 206
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 45/104 (43%), Gaps = 12/104 (11%)
Query: 9 WRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKI-SGVKKLQLTRLLLLMFYGFAYGGPF 67
++KY + PL T IT G L G D +AQ + K R L FYG P
Sbjct: 5 YQKYSQLIAKRPLITNIITTGFLFGSGDYLAQTLYPSSSKYDYKRTLRATFYGSIIFAPI 64
Query: 68 G----HFLHKLMDIIFKGKKDKKTVAK------KVLLEQLTSSP 101
G LHK+ + F K TV+K KV ++QL +P
Sbjct: 65 GDKWYRLLHKI-NFPFPKTKVSPTVSKVLNTLTKVGVDQLVFAP 107
>sp|Q6DGV7|M17L2_DANRE Mpv17-like protein 2 OS=Danio rerio GN=mpv17l2 PE=2 SV=1
Length = 199
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 23 TKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYGFAYG---GPFGHFLHKLMDIIF 79
T ++ G + D I Q + TR FA G GPF H+ ++ +D F
Sbjct: 29 TNTVSCGGMLAAGDLIQQTREIRRTPGRTRDWSRTGCMFAVGCSMGPFMHYWYQWLDKYF 88
Query: 80 KGKKDKKTVAKKVLLEQLTSSP 101
G V KKVL++QL +SP
Sbjct: 89 IGN-GINNVCKKVLVDQLVASP 109
>sp|Q54ZX5|PX24A_DICDI PXMP2/4 family protein 1 OS=Dictyostelium discoideum
GN=DDB_G0277335 PE=3 SV=1
Length = 202
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 10 RKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGVKKLQLTRLLLLMFYGFAYGGPFGH 69
Y LQ P+ TK++T ++ D +AQKI + R L++ G P H
Sbjct: 11 NSYKKSLQNRPVITKSLTGTVVFFLGDTLAQKIEN-RGYDPKRTLMMCTVGTFIVVPQIH 69
Query: 70 FLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSPW 102
F K +D F K KV+++QLT P+
Sbjct: 70 FWFKFLDKTFT-KPGWAGAIPKVVVDQLTFGPY 101
>sp|Q754F0|SYM1_ASHGO Protein SYM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=SYM1 PE=3 SV=1
Length = 182
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 12 YLIQLQVHPLRTKAITAGILAGCSDAIAQ 40
Y LQ HP RT A+T G L G D +AQ
Sbjct: 8 YKASLQSHPKRTNALTTGFLFGLGDIVAQ 36
>sp|Q9Z8M3|RS1_CHLPN 30S ribosomal protein S1 OS=Chlamydia pneumoniae GN=rpsA PE=3 SV=1
Length = 580
Score = 32.7 bits (73), Expect = 0.59, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 84 DKKTVAKKVLLEQLTSSPWNNFLFMMYYGLVVEGVAVRFNFVGKIMEF 131
DK++ + ++QL+S+PWN M G V+ GV + G +E
Sbjct: 451 DKESKKITLGVKQLSSNPWNEIEAMFPAGTVISGVVTKITAFGAFVEL 498
>sp|Q68F62|MP17L_XENLA Mpv17-like protein OS=Xenopus laevis GN=mpv17l PE=2 SV=1
Length = 203
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 11 KYLIQL-QVHPLRTKAITAGILAGCSDAIAQKI--SGVKKLQLTRLLLLMFYGFAYGGPF 67
+ LIQ + HP T G L +D + QK+ S + + + + GF + F
Sbjct: 2 RILIQFTKRHPWLTNVTIYGSLFASADIVQQKLSKSPTEPIDFKQTAKVGLVGFCFHANF 61
Query: 68 GHFLHKLMDIIFKGKKDKKTVAKKVLLEQLTSSP 101
F + ++ F G V +KV +QL ++P
Sbjct: 62 NFFWLRFIERTFPGSA-PLNVIRKVACDQLMAAP 94
>sp|Q833Z1|PUR5_ENTFA Phosphoribosylformylglycinamidine cyclo-ligase OS=Enterococcus
faecalis (strain ATCC 700802 / V583) GN=purM PE=3 SV=1
Length = 343
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 12 YLIQLQVHPLRTKAITAGILAGCSDAIAQKISG 44
YL V+P + +AI AG+ AGC +A A I G
Sbjct: 105 YLALGTVNPAKVEAIVAGVAAGCCEANAALIGG 137
>sp|A5D787|M17L2_BOVIN Mpv17-like protein 2 OS=Bos taurus GN=MPV17L2 PE=2 SV=1
Length = 218
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Query: 21 LRTKAITAGILAGCSDAIAQ----KISGVKKLQLTRLLLLMFYGFAYGGPFGHFLHKLMD 76
L T + G+L D Q + +K R + + G + G PF H+ + +D
Sbjct: 26 LVTNTLGCGVLMAAGDGARQTWEIRARPGQKFDPRRSVSMFAVGCSMG-PFLHYWYLWLD 84
Query: 77 IIFK--GKKDKKTVAKKVLLEQLTSSP 101
+F G V KKVL++QL +SP
Sbjct: 85 RLFPASGFPGLPNVLKKVLIDQLVASP 111
>sp|Q567V2|M17L2_HUMAN Mpv17-like protein 2 OS=Homo sapiens GN=MPV17L2 PE=1 SV=2
Length = 206
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 65 GPFGHFLHKLMDIIF--KGKKDKKTVAKKVLLEQLTSSP 101
GPF H+ + +D +F G + V KKVL++QL +SP
Sbjct: 73 GPFLHYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASP 111
>sp|A2CI98|DYTN_MOUSE Dystrotelin OS=Mus musculus GN=Dytn PE=2 SV=1
Length = 653
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 16 LQVHPLRTKAITAGILAGCS-DAIAQKISGVKKLQLTRLLLLMFYGFAYGGPFGHFLHKL 74
LQ+ P K + AG ++ ++K + ++ +L LL + F P G L L
Sbjct: 556 LQIPPTEVKIPAQTLSAGKEMESCSEKRNNLEDEELQALLPRLLDAFDLDSPTG--LQPL 613
Query: 75 MDIIFKGKKDKKTVAKKVLLEQLTSSPWN 103
MD+ G+ + A VL++Q+T W+
Sbjct: 614 MDMELYGRAQQVCRAFSVLVDQITLPTWS 642
>sp|Q8VIK2|M17L2_MOUSE Mpv17-like protein 2 OS=Mus musculus GN=Mpv17l2 PE=1 SV=1
Length = 200
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 65 GPFGHFLHKLMDIIF--KGKKDKKTVAKKVLLEQLTSSP 101
GPF HF + +D + G + +V KKVL++Q +SP
Sbjct: 73 GPFLHFWYLWLDRLLPASGLRSLPSVMKKVLVDQTVASP 111
>sp|Q73BB8|NORM_BACC1 Probable multidrug resistance protein NorM OS=Bacillus cereus
(strain ATCC 10987) GN=norM PE=3 SV=1
Length = 454
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 12 YLIQLQVHPLRTKAITAGILAGCSDAIAQKISGV----KKLQLTRLLLLMFYGFAYGGPF 67
Y +QVH L + + IL SDAIA + G K + ++ ++ L+ Y + G P
Sbjct: 347 YTTDIQVHHLAKEFLIFAILFQISDAIATPVQGALRGYKDVNVSLIMTLIAY-WVIGLPL 405
Query: 68 GHFLHKLMDIIFKG 81
G+ L D KG
Sbjct: 406 GYILATYTDWAAKG 419
>sp|Q63DZ4|NORM_BACCZ Probable multidrug resistance protein NorM OS=Bacillus cereus
(strain ZK / E33L) GN=norM PE=3 SV=1
Length = 453
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 6 KEAWRKYLIQLQVHPLRTKAITAGILAGCSDAIAQKISGV----KKLQLTRLLLLMFYGF 61
E Y +QVH L + + IL SDAIA + G K + + ++ L+ Y +
Sbjct: 341 NEIASIYTTDIQVHHLAKEFLIFAILFQISDAIATPVQGALRGYKDVNVALIMTLIAY-W 399
Query: 62 AYGGPFGHFLHKLMDIIFKG 81
G P G+ L D KG
Sbjct: 400 VIGLPLGYILATYTDWAAKG 419
>sp|Q81T85|NORM_BACAN Probable multidrug resistance protein NorM OS=Bacillus anthracis
GN=norM PE=3 SV=1
Length = 453
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 12 YLIQLQVHPLRTKAITAGILAGCSDAIAQKISGV----KKLQLTRLLLLMFYGFAYGGPF 67
Y +QVH L + + IL SDAIA + G K + + ++ L+ Y + G P
Sbjct: 347 YTTDIQVHHLAKEFLIFAILFQISDAIATPVQGALRGYKDVNVALIMTLIAY-WVIGLPL 405
Query: 68 GHFLHKLMDIIFKG 81
G+ L D KG
Sbjct: 406 GYILATYTDWAAKG 419
>sp|Q6HLG9|NORM_BACHK Probable multidrug resistance protein NorM OS=Bacillus
thuringiensis subsp. konkukian (strain 97-27) GN=norM
PE=3 SV=1
Length = 453
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 12 YLIQLQVHPLRTKAITAGILAGCSDAIAQKISGV----KKLQLTRLLLLMFYGFAYGGPF 67
Y +QVH L + + IL SDAIA + G K + + ++ L+ Y + G P
Sbjct: 347 YTTDIQVHHLAKEFLIFAILFQISDAIATPVQGALRGYKDVNVALIMTLIAY-WVIGLPL 405
Query: 68 GHFLHKLMDIIFKG 81
G+ L D KG
Sbjct: 406 GYILATYTDWAAKG 419
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.141 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,034,737
Number of Sequences: 539616
Number of extensions: 1664356
Number of successful extensions: 4568
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 4537
Number of HSP's gapped (non-prelim): 41
length of query: 134
length of database: 191,569,459
effective HSP length: 100
effective length of query: 34
effective length of database: 137,607,859
effective search space: 4678667206
effective search space used: 4678667206
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)