Query 032750
Match_columns 134
No_of_seqs 157 out of 1345
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 08:29:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032750.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032750hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1cyo_A Cytochrome B5; electron 100.0 1.7E-30 5.6E-35 174.2 6.8 85 2-86 1-85 (93)
2 3lf5_A Cytochrome B5 reductase 100.0 7.7E-31 2.6E-35 174.3 4.7 83 1-83 1-83 (88)
3 3ner_A Cytochrome B5 type B; h 100.0 3.1E-30 1E-34 172.6 7.6 82 4-85 8-89 (92)
4 1hko_A Cytochrome B5; electron 100.0 6.2E-30 2.1E-34 174.6 9.0 86 2-87 5-90 (104)
5 2ibj_A Cytochrome B5, CYTB5; F 100.0 5.5E-30 1.9E-34 170.0 6.5 84 1-84 1-85 (88)
6 1cxy_A Cytochrome B5; helix, b 100.0 1.2E-28 4.2E-33 164.2 6.7 78 5-82 7-88 (90)
7 2keo_A Probable E3 ubiquitin-p 99.9 6.9E-30 2.4E-34 176.4 -1.7 84 1-84 19-102 (112)
8 1x3x_A Cytochrome B5; hemoprot 99.9 1.8E-28 6E-33 160.8 4.8 76 5-81 3-82 (82)
9 1mj4_A Sulfite oxidase; cytoch 99.9 3E-28 1E-32 159.7 5.3 77 3-80 2-82 (82)
10 1sox_A Sulfite oxidase; oxidor 99.9 2.1E-22 7.2E-27 167.5 10.1 82 3-85 2-87 (466)
11 1kbi_A Cytochrome B2, L-LCR; f 99.9 3.1E-22 1E-26 168.2 7.0 81 5-86 8-90 (511)
12 1j03_A Putative steroid bindin 99.7 7E-19 2.4E-23 119.4 4.8 59 6-66 3-65 (102)
13 4hkr_A Calcium release-activat 32.9 24 0.00081 26.1 2.2 18 114-131 153-170 (214)
14 1iz6_A Initiation factor 5A; S 26.5 23 0.00078 24.2 1.1 32 7-43 6-37 (138)
15 1ho8_A Vacuolar ATP synthase s 24.8 5 0.00017 33.3 -2.9 34 30-65 426-459 (480)
16 1bkb_A Translation initiation 23.1 34 0.0012 23.1 1.5 32 7-43 8-39 (136)
17 2ls4_A High affinity copper up 24.1 24 0.00082 17.3 0.0 18 114-131 4-21 (26)
No 1
>1cyo_A Cytochrome B5; electron transport; HET: HEM; 1.50A {Bos taurus} SCOP: d.120.1.1 PDB: 1bfx_A* 1i87_A 1i8c_A 1iet_A 1ieu_A 1do9_A* 1aqa_A* 1aw3_A* 1axx_A* 1b5a_A* 1b5b_A* 1blv_A* 1mny_A* 2axx_A* 1ib7_A* 1jex_A* 1ehb_A* 1nx7_A* 1u9u_A* 1m20_A* ...
Probab=99.96 E-value=1.7e-30 Score=174.24 Aligned_cols=85 Identities=47% Similarity=0.863 Sum_probs=79.0
Q ss_pred CCCCCccCHHHHhccCCCCCeEEEEcCEEeecccccccCCCchhHhhhccCCCCchhhhhcCCCHHHHhccccceeeeec
Q 032750 2 GGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDID 81 (134)
Q Consensus 2 ~~~~~~~t~~ev~~h~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~l~~~aGkD~T~~f~~~~hs~~a~~~l~~~~VG~l~ 81 (134)
|.+.+.||++||++|++.++|||+|+|+|||||+|+..||||..+|+.++|+|+|+.|+.++|+..++++|++|+||++.
T Consensus 1 s~~~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aG~DaT~~f~~~~Hs~~a~~~L~~~~IG~l~ 80 (93)
T 1cyo_A 1 SKAVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELH 80 (93)
T ss_dssp CCSCCEECHHHHTTCEETTEEEEEETTEEEECTTTTTTCTTCSHHHHHHTTSBCHHHHHHTTCCHHHHHHHTTTEEEEEC
T ss_pred CCCCCccCHHHHHhhCCCCCEEEEECCEEEECCCcchhCcChHHHHHHhcCccchHHHHHcCCCHHHHHHHHhCeeEEec
Confidence 34578999999999999999999999999999999999999999999999999999999988999999999999999998
Q ss_pred CCCCC
Q 032750 82 SSTVP 86 (134)
Q Consensus 82 ~~~~~ 86 (134)
+.+.+
T Consensus 81 ~~~~~ 85 (93)
T 1cyo_A 81 PDDRS 85 (93)
T ss_dssp GGGGG
T ss_pred Ccccc
Confidence 65443
No 2
>3lf5_A Cytochrome B5 reductase 4; NCB5OR, electron transfer, redox, heme, endoplasmic reticulu flavoprotein, iron, metal-binding, NAD, oxidoreductase; HET: HEM; 1.25A {Homo sapiens}
Probab=99.96 E-value=7.7e-31 Score=174.25 Aligned_cols=83 Identities=35% Similarity=0.671 Sum_probs=78.7
Q ss_pred CCCCCCccCHHHHhccCCCCCeEEEEcCEEeecccccccCCCchhHhhhccCCCCchhhhhcCCCHHHHhccccceeeee
Q 032750 1 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 80 (134)
Q Consensus 1 m~~~~~~~t~~ev~~h~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~l~~~aGkD~T~~f~~~~hs~~a~~~l~~~~VG~l 80 (134)
|..+++.||++||++|+++++|||+|+|+|||||+|++.||||.++|+.++|+|+|+.|+.+||+..++++|++|+||++
T Consensus 1 ~~~~l~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~l~~~aG~DaT~~F~~~h~~~~~~~~L~~~~IG~l 80 (88)
T 3lf5_A 1 MKGRLIEVTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNYESMLKECLVGRM 80 (88)
T ss_dssp -CCSSEEECHHHHHHCEETTEEEEEETTEEEECGGGTTTCTTCHHHHHTTTTEECHHHHHHHHTTCCHHHHTGGGEEEEE
T ss_pred CCCCCCEeCHHHHHhhCCCCCEEEEECCEEEECccchhhCcChhhhhhhcCCCcchHHHHHHCCcHHHHHHHHcCeeEEe
Confidence 77889999999999999999999999999999999999999999999999999999999999888899999999999999
Q ss_pred cCC
Q 032750 81 DSS 83 (134)
Q Consensus 81 ~~~ 83 (134)
..+
T Consensus 81 ~~~ 83 (88)
T 3lf5_A 81 AIK 83 (88)
T ss_dssp CCC
T ss_pred CCC
Confidence 765
No 3
>3ner_A Cytochrome B5 type B; heme, electron transport; HET: HEM; 1.45A {Homo sapiens} SCOP: d.120.1.1 PDB: 1awp_A* 3mus_A* 1b5m_A* 1eue_A* 1icc_A* 1lj0_A* 2i89_A*
Probab=99.96 E-value=3.1e-30 Score=172.64 Aligned_cols=82 Identities=52% Similarity=0.997 Sum_probs=78.0
Q ss_pred CCCccCHHHHhccCCCCCeEEEEcCEEeecccccccCCCchhHhhhccCCCCchhhhhcCCCHHHHhccccceeeeecCC
Q 032750 4 EGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSS 83 (134)
Q Consensus 4 ~~~~~t~~ev~~h~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~l~~~aGkD~T~~f~~~~hs~~a~~~l~~~~VG~l~~~ 83 (134)
+.+.||++||++|++.++|||+|+|+|||||+|+..||||..+|+.++|+|+|+.|+.++||..++++|++|+||+|.++
T Consensus 8 ~~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~l~~~aG~DaT~~F~~~~Hs~~a~~~L~~~~IG~l~~~ 87 (92)
T 3ner_A 8 SVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPS 87 (92)
T ss_dssp CSCEECHHHHTTCEETTEEEEEETTEEEECGGGTTTCTTCSHHHHTTTTSBCHHHHHHTTCCHHHHHHHGGGEEEEECGG
T ss_pred CCCeeCHHHHHhhCCCCCEEEEECCEEEEcccccccCCCHHHHHHHhcCCcchHHHHHcCCCHHHHHHHHhCeeEEEChH
Confidence 46899999999999999999999999999999999999999999999999999999998899999999999999999876
Q ss_pred CC
Q 032750 84 TV 85 (134)
Q Consensus 84 ~~ 85 (134)
+.
T Consensus 88 ~~ 89 (92)
T 3ner_A 88 DL 89 (92)
T ss_dssp GS
T ss_pred hc
Confidence 54
No 4
>1hko_A Cytochrome B5; electron transfer protein, heme, electron transport; HET: HEM; NMR {Bos taurus} SCOP: d.120.1.1 PDB: 2i96_A*
Probab=99.96 E-value=6.2e-30 Score=174.64 Aligned_cols=86 Identities=47% Similarity=0.853 Sum_probs=80.3
Q ss_pred CCCCCccCHHHHhccCCCCCeEEEEcCEEeecccccccCCCchhHhhhccCCCCchhhhhcCCCHHHHhccccceeeeec
Q 032750 2 GGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDID 81 (134)
Q Consensus 2 ~~~~~~~t~~ev~~h~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~l~~~aGkD~T~~f~~~~hs~~a~~~l~~~~VG~l~ 81 (134)
.++++.||++||++|++.++|||+|+|+|||||+|+..||||..+|+.++|+|+|+.|+.++|+..++++|++|+||++.
T Consensus 5 ~~~~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aGkDaT~~F~~~~Hs~~a~~~L~~~~IG~l~ 84 (104)
T 1hko_A 5 SKAVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELH 84 (104)
T ss_dssp CCCCEEECHHHHHHCBSSSSBEEEETTEEEEHHHHSSSSSSCSHHHHTTCSEECHHHHTTTTCCHHHHHHHTTTEEEEEC
T ss_pred cccCCccCHHHHHHhcCCCCEEEEECCEEEECCcchhhCcChHHHHHHhcCccchHHHHHcCCCHHHHHHHHcCeeEEEC
Confidence 45678999999999999999999999999999999999999999999999999999999988999999999999999998
Q ss_pred CCCCCC
Q 032750 82 SSTVPT 87 (134)
Q Consensus 82 ~~~~~~ 87 (134)
+.+.+.
T Consensus 85 ~~~~~~ 90 (104)
T 1hko_A 85 PDDRSK 90 (104)
T ss_dssp TTSSTT
T ss_pred Cccccc
Confidence 766543
No 5
>2ibj_A Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY diffraction, heme, electron transport; HET: HEM; 1.55A {Musca domestica}
Probab=99.96 E-value=5.5e-30 Score=170.00 Aligned_cols=84 Identities=50% Similarity=0.899 Sum_probs=77.4
Q ss_pred CCC-CCCccCHHHHhccCCCCCeEEEEcCEEeecccccccCCCchhHhhhccCCCCchhhhhcCCCHHHHhccccceeee
Q 032750 1 MGG-EGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGD 79 (134)
Q Consensus 1 m~~-~~~~~t~~ev~~h~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~l~~~aGkD~T~~f~~~~hs~~a~~~l~~~~VG~ 79 (134)
|++ +.+.||++||++|++.++|||+|+|+|||||+|+..||||..+|+.++|+|+|+.|+.++|+..++++|++|+||+
T Consensus 1 m~~~~~~~~t~~ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aG~DaT~~f~~~~Hs~~a~~~L~~~~IG~ 80 (88)
T 2ibj_A 1 MSSEDVKYFTRAEVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSDAREMMKQYKVGE 80 (88)
T ss_dssp --CCCCCEECHHHHHTSEETTEEEEEETTEEEECGGGTTTCTTCSHHHHTTTTEECHHHHHHHTCCHHHHHHHGGGEEEE
T ss_pred CCCccCCccCHHHHHHhCCCCCEEEEECCEEEECCcchhhCcCHHHHHHHhCCCcchHHHHHcCCCHHHHHHHHcCceEE
Confidence 544 5789999999999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred ecCCC
Q 032750 80 IDSST 84 (134)
Q Consensus 80 l~~~~ 84 (134)
+.+++
T Consensus 81 l~~~~ 85 (88)
T 2ibj_A 81 LVAEE 85 (88)
T ss_dssp ECGGG
T ss_pred eCccc
Confidence 97543
No 6
>1cxy_A Cytochrome B5; helix, beta-strand, electron transport; HET: HEM; 1.65A {Ectothiorhodospira shaposhnikovii} SCOP: d.120.1.1
Probab=99.95 E-value=1.2e-28 Score=164.18 Aligned_cols=78 Identities=35% Similarity=0.751 Sum_probs=73.1
Q ss_pred CCccCHHHHhccCCCCCeEEEEcCEEeecccccccCCCchhHhhhccCCCCchhhh----hcCCCHHHHhccccceeeee
Q 032750 5 GKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFE----DVGHSSSAKAMMDEFYVGDI 80 (134)
Q Consensus 5 ~~~~t~~ev~~h~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~l~~~aGkD~T~~f~----~~~hs~~a~~~l~~~~VG~l 80 (134)
.+.||++||++|+++++|||+|+|+|||||+|+..||||.++|+.++|+|+|+.|+ ...||..++++|++|+||++
T Consensus 7 ~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aG~DaT~~f~~~~~~~~Hs~~a~~~L~~~~IG~l 86 (90)
T 1cxy_A 7 LPVFTLEQVAEHHSPDDCWMAIHGKVYDLTPYVPNHPGPAGMMLVWCGQESTEAWETKSYGEPHSSLAARLLQRYLIGTL 86 (90)
T ss_dssp CCBCCHHHHTTCEETTEEEEEETTEEEECTTTGGGCCSSTTTTGGGTTSBCHHHHHHTTTTCCCCHHHHHHHHHTEEEEC
T ss_pred CCCcCHHHHHHhcCCCCEEEEECCEEEECccchhhCcChHHHHHHHCCcchhHHHhhcccccCCCHHHHHHHHhCceeEe
Confidence 57899999999999999999999999999999999999999999999999999999 46899999999999999998
Q ss_pred cC
Q 032750 81 DS 82 (134)
Q Consensus 81 ~~ 82 (134)
++
T Consensus 87 ~~ 88 (90)
T 1cxy_A 87 EE 88 (90)
T ss_dssp --
T ss_pred CC
Confidence 63
No 7
>2keo_A Probable E3 ubiquitin-protein ligase HERC2; protein of unknown function, HERC2 cytochrome domain, ligase binding, phosphoprotein; NMR {Homo sapiens}
Probab=99.95 E-value=6.9e-30 Score=176.38 Aligned_cols=84 Identities=23% Similarity=0.424 Sum_probs=77.5
Q ss_pred CCCCCCccCHHHHhccCCCCCeEEEEcCEEeecccccccCCCchhHhhhccCCCCchhhhhcCCCHHHHhccccceeeee
Q 032750 1 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 80 (134)
Q Consensus 1 m~~~~~~~t~~ev~~h~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~l~~~aGkD~T~~f~~~~hs~~a~~~l~~~~VG~l 80 (134)
|+++.+.||++||++|++.++|||+|+|+|||||+|+..||||..+|+.++|+|+|+.|+.++||..|+++|++|+||.+
T Consensus 19 m~~~~~~~t~~Ev~~h~~~~d~wvvi~G~VYDVT~fl~~HPGG~~~l~~~aGkDaT~~F~~~~Hs~~a~~~L~~~~IG~l 98 (112)
T 2keo_A 19 NNEKVTLVRIADLENHNNDGGFWTVIDGKVYDIKDFQTQSLTENSILAQFAGEDPVVALEAALQFEDTRESMHAFCVGQY 98 (112)
T ss_dssp --CCCCEECHHHHHHHHHHTCCEEEETTEEEEHHHHHHHHTSTTSTTGGGTTSCHHHHHHHHHHSTTGGGTHHHHEEEEE
T ss_pred CCCCCCccCHHHHHHhcCCCCEEEEECCEEEECCcchhhCCCchhhhhhhCCccchHHHhHcCCCHHHHHHHHhCceEee
Confidence 66667899999999999999999999999999999999999999999999999999999997799999999999999999
Q ss_pred cCCC
Q 032750 81 DSST 84 (134)
Q Consensus 81 ~~~~ 84 (134)
...+
T Consensus 99 ~~~e 102 (112)
T 2keo_A 99 LEPD 102 (112)
T ss_dssp CCHH
T ss_pred CCcc
Confidence 7544
No 8
>1x3x_A Cytochrome B5; hemoprotein, porcine parasitic namatode, electron transport; HET: HEM; 1.80A {Ascaris suum}
Probab=99.95 E-value=1.8e-28 Score=160.81 Aligned_cols=76 Identities=34% Similarity=0.624 Sum_probs=72.8
Q ss_pred CCccCHHHHhccCCCCCeEEEEcCEEeecccccccCCCchhHhhhccCCCCchh--hhhcC--CCHHHHhccccceeeee
Q 032750 5 GKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDD--FEDVG--HSSSAKAMMDEFYVGDI 80 (134)
Q Consensus 5 ~~~~t~~ev~~h~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~l~~~aGkD~T~~--f~~~~--hs~~a~~~l~~~~VG~l 80 (134)
.+.||++||++|+++++|||+|+|+|||||+|++.|||| ++|+.++|+|+|+. |+.+| ||..++++|++|+||++
T Consensus 3 ~~~~t~~ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG-~~i~~~aG~D~T~~~~F~~~h~~hs~~a~~~L~~~~IG~l 81 (82)
T 1x3x_A 3 DKKYTKEEVAKHNTQNDLWIIYDGEVHDMTSFYKEHPGG-KVILNKAGQDATSVLKTLAPHVKAADVVMKKLKQTCIGKV 81 (82)
T ss_dssp SCEECHHHHHTCEETTEEEEEETTEEEECGGGGGGCTTG-GGGGGGTTSBCHHHHHHSHHHHHTHHHHHHHHHHHEEEEE
T ss_pred CCccCHHHHHhhCCCCCEEEEECCEEEECCcchhhCcCh-hhhhhhCCCCCchhhhhhcccccchHHHHHHHHhCcceEe
Confidence 478999999999999999999999999999999999999 99999999999999 99998 99999999999999987
Q ss_pred c
Q 032750 81 D 81 (134)
Q Consensus 81 ~ 81 (134)
.
T Consensus 82 ~ 82 (82)
T 1x3x_A 82 K 82 (82)
T ss_dssp C
T ss_pred C
Confidence 3
No 9
>1mj4_A Sulfite oxidase; cytochrome B5, heme, oxidoreductase; HET: HEM; 1.20A {Homo sapiens} SCOP: d.120.1.1
Probab=99.95 E-value=3e-28 Score=159.71 Aligned_cols=77 Identities=31% Similarity=0.643 Sum_probs=69.5
Q ss_pred CCCCccCHHHHhccCCCCC-eEEEEcCEEeecccccccCCCchhHhhhccCCCCchhhhh---cCCCHHHHhccccceee
Q 032750 3 GEGKVYTLAEVSGHNDRKD-CWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFED---VGHSSSAKAMMDEFYVG 78 (134)
Q Consensus 3 ~~~~~~t~~ev~~h~~~~~-~wv~i~g~VYDvt~f~~~HPGG~~~l~~~aGkD~T~~f~~---~~hs~~a~~~l~~~~VG 78 (134)
++.+.||++||++|+++++ |||+|+|+|||||+|++.||||.+.|+.++|+| |+.|+. .+||..|+++|++|+||
T Consensus 2 ~~~~~~t~~ev~~h~~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~il~~aG~D-t~~f~~~~~~~hs~~a~~~L~~~~IG 80 (82)
T 1mj4_A 2 ESTHIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGP-LEPFWALYAVHNQSHVRELLAQYKIG 80 (82)
T ss_dssp -CCCBCCCC-CTTCEETTTEEEEEETTEEEECTTTGGGSTTCHHHHHTTTTSB-SHHHHTTCGGGCSHHHHHHHHTTEEE
T ss_pred CCCCccCHHHHHHhcCCCCCeEEEECCEEEEchHHHHhCCCHhHHHHHHcCCC-hHHHHhhccccCcHHHHHHHHhCcce
Confidence 4578999999999999997 999999999999999999999988888899999 678985 47999999999999999
Q ss_pred ee
Q 032750 79 DI 80 (134)
Q Consensus 79 ~l 80 (134)
+|
T Consensus 81 ~l 82 (82)
T 1mj4_A 81 EL 82 (82)
T ss_dssp EC
T ss_pred eC
Confidence 85
No 10
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*
Probab=99.87 E-value=2.1e-22 Score=167.52 Aligned_cols=82 Identities=27% Similarity=0.511 Sum_probs=75.3
Q ss_pred CCCCccCHHHHhccCCCCC-eEEEEcCEEeecccccccCCCchhHhhhccCCCCchhhhh---cCCCHHHHhccccceee
Q 032750 3 GEGKVYTLAEVSGHNDRKD-CWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFED---VGHSSSAKAMMDEFYVG 78 (134)
Q Consensus 3 ~~~~~~t~~ev~~h~~~~~-~wv~i~g~VYDvt~f~~~HPGG~~~l~~~aGkD~T~~f~~---~~hs~~a~~~l~~~~VG 78 (134)
++.+.||++||++|++.++ |||+|+|+|||||+|++.||||.++|+.++|+| |+.|+. .+||..++++|++|+||
T Consensus 2 ~~~~~~t~~Ev~~H~~~~d~~Wvii~g~VYDvT~fl~~HPGG~~~il~~aG~D-T~~f~~~~~~~Hs~~a~~~L~~~~IG 80 (466)
T 1sox_A 2 PSYPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGGA-LEPFWALYAVHGEPHVLELLQQYKVG 80 (466)
T ss_dssp -CCCEECHHHHTTCEETTTEEEEEETTEEEECTTTTTTSTTCHHHHGGGTTSB-SHHHHHHSGGGGSHHHHHHHHTTEEE
T ss_pred CCCCeeCHHHHHHhcCCCCceEEEECCEEEechHhHhhCcCCcccchhhcCCc-cccccccccccCCHHHHHHHHhCceE
Confidence 4578999999999999998 999999999999999999999998999999999 999986 57999999999999999
Q ss_pred eecCCCC
Q 032750 79 DIDSSTV 85 (134)
Q Consensus 79 ~l~~~~~ 85 (134)
.+..++.
T Consensus 81 ~l~~~~~ 87 (466)
T 1sox_A 81 ELSPDEA 87 (466)
T ss_dssp EECCCCC
T ss_pred Eeccccc
Confidence 9986553
No 11
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.86 E-value=3.1e-22 Score=168.15 Aligned_cols=81 Identities=40% Similarity=0.731 Sum_probs=72.8
Q ss_pred CCccCHHHHhccCCCCCeEEEEcCEEeecccccccCCCchhHhhhccCCCCchhhhhcCCCHHH-Hhc-cccceeeeecC
Q 032750 5 GKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSA-KAM-MDEFYVGDIDS 82 (134)
Q Consensus 5 ~~~~t~~ev~~h~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~l~~~aGkD~T~~f~~~~hs~~a-~~~-l~~~~VG~l~~ 82 (134)
.+.||++||++|++.++|||+|+|+|||||+|++.||||.++|+.++|+|+|+.|+.+ |+..+ .++ +++|+||.+..
T Consensus 8 ~~~~t~~ev~~h~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~i~~~aG~DaT~~f~~~-H~~~~~~~~l~~~~~iG~l~~ 86 (511)
T 1kbi_A 8 KQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL-HAPNVIDKYIAPEKKLGPLQG 86 (511)
T ss_dssp SCCBCTTHHHHCEETTEEEEEETTEEEECTTTGGGCTTCHHHHHTTTTSBCHHHHGGG-SCTTHHHHHSCGGGEEEEBCS
T ss_pred CCccCHHHHHHhCCCCCEEEEECCEEEECCcchhhCcChHHHHHHHcCcchhhhhhhc-CCHHHHHHhhccccEEEEecC
Confidence 5899999999999999999999999999999999999999999999999999999998 55554 454 47899999987
Q ss_pred CCCC
Q 032750 83 STVP 86 (134)
Q Consensus 83 ~~~~ 86 (134)
++.+
T Consensus 87 ~~~~ 90 (511)
T 1kbi_A 87 SMPP 90 (511)
T ss_dssp CCCT
T ss_pred Cccc
Confidence 6654
No 12
>1j03_A Putative steroid binding protein; alpha and beta, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.120.1.2 PDB: 1t0g_A
Probab=99.75 E-value=7e-19 Score=119.39 Aligned_cols=59 Identities=27% Similarity=0.409 Sum_probs=53.6
Q ss_pred CccCHHHHhccCCCC---CeEEEEcCEEeecccccc-cCCCchhHhhhccCCCCchhhhhcCCCH
Q 032750 6 KVYTLAEVSGHNDRK---DCWLIIEGKVYDVTKFLD-DHPGGDEVLLSATGKDATDDFEDVGHSS 66 (134)
Q Consensus 6 ~~~t~~ev~~h~~~~---~~wv~i~g~VYDvt~f~~-~HPGG~~~l~~~aGkD~T~~f~~~~hs~ 66 (134)
+.||++||++|++.+ +|||+|+|+|||||+|.. .||||. +..+||+|+|+.|...+|+.
T Consensus 3 ~~~T~~El~~~ng~~~~~~~~vaI~G~VYDVT~~~~~~hPGG~--~~~~AG~DaT~~f~~~~~~~ 65 (102)
T 1j03_A 3 MEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGD--YSMFAGKDASRALGKMSKNE 65 (102)
T ss_dssp CCCCHHHHTTCBSCSSSCCBEEEETTEEEECGGGHHHHSSSST--TTTTTTSBCHHHHHHTCCCS
T ss_pred cccCHHHHHHhcCCCCCCCEEEEECCEEEECCCCccccCCCCc--ccccccchHHHHHHHcCCCh
Confidence 689999999999865 799999999999999976 799998 45899999999999988875
No 13
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=32.88 E-value=24 Score=26.11 Aligned_cols=18 Identities=39% Similarity=0.851 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 032750 114 FLVPLLILGLAVGIRFYT 131 (134)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~ 131 (134)
.++|+.++.++|+++||.
T Consensus 153 vliPv~i~F~~Fa~hFYr 170 (214)
T 4hkr_A 153 VLIPVMIIFMAFAIHFYR 170 (214)
T ss_dssp HTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 457777888888888874
No 14
>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: b.34.5.2 b.40.4.5
Probab=26.47 E-value=23 Score=24.18 Aligned_cols=32 Identities=13% Similarity=0.313 Sum_probs=24.9
Q ss_pred ccCHHHHhccCCCCCeEEEEcCEEeecccccccCCCc
Q 032750 7 VYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGG 43 (134)
Q Consensus 7 ~~t~~ev~~h~~~~~~wv~i~g~VYDvt~f~~~HPGG 43 (134)
.++.++|++ ...|.++|..|-|.++....||.
T Consensus 6 ~i~a~~lkk-----G~~i~~~g~p~~Vve~~~~KpGK 37 (138)
T 1iz6_A 6 KVQVSKLKP-----GRYIIIDDEPCRIVNITVSSPGK 37 (138)
T ss_dssp EEEGGGCCT-----TSEEEETTEEEEEEEEEECCCCT
T ss_pred EEEHHHccC-----CCEEEECCEEEEEEEEEeecCCC
Confidence 345555544 46789999999999999999985
No 15
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=24.78 E-value=5 Score=33.31 Aligned_cols=34 Identities=29% Similarity=0.387 Sum_probs=26.1
Q ss_pred EeecccccccCCCchhHhhhccCCCCchhhhhcCCC
Q 032750 30 VYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHS 65 (134)
Q Consensus 30 VYDvt~f~~~HPGG~~~l~~~aGkD~T~~f~~~~hs 65 (134)
-+|+..|+..||.|..++.+..||+.- ++-..|.
T Consensus 426 c~Digefvr~~P~gr~i~~~lg~K~~V--M~Lm~h~ 459 (480)
T 1ho8_A 426 LNDITHVVELLPESIDVLDKTGGKADI--MELLNHS 459 (480)
T ss_dssp HHHHHHHHHHCTTHHHHHHHHSHHHHH--HHHTSCS
T ss_pred cccHHHHHHHCcchhHHHHHcCcHHHH--HHHhcCC
Confidence 379999999999999999998886543 3333454
No 16
>1bkb_A Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum} SCOP: b.34.5.2 b.40.4.5
Probab=23.09 E-value=34 Score=23.11 Aligned_cols=32 Identities=16% Similarity=0.343 Sum_probs=24.5
Q ss_pred ccCHHHHhccCCCCCeEEEEcCEEeecccccccCCCc
Q 032750 7 VYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGG 43 (134)
Q Consensus 7 ~~t~~ev~~h~~~~~~wv~i~g~VYDvt~f~~~HPGG 43 (134)
.++.++|++ ...|.++|..|-|.++....||.
T Consensus 8 ~i~~~~lrk-----G~~i~~~g~p~~Vve~~~~KpGK 39 (136)
T 1bkb_A 8 YVEAGELKE-----GSYVVIDGEPCRVVEIEKSKTGK 39 (136)
T ss_dssp EEEGGGCCT-----TCEEEETTEEEEEEEEEEECCST
T ss_pred EEEHHHccC-----CCEEEECCEEEEEEEEEEecCCC
Confidence 344455544 56789999999999999999983
No 17
>2ls4_A High affinity copper uptake protein 1; HCTR1 TMDS, oligomerization, metal transport; NMR {Homo sapiens}
Probab=24.14 E-value=24 Score=17.32 Aligned_cols=18 Identities=17% Similarity=0.414 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 032750 114 FLVPLLILGLAVGIRFYT 131 (134)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~ 131 (134)
|++..++++++++|.++.
T Consensus 4 ~l~iavvlGa~~Gyf~F~ 21 (26)
T 2ls4_A 4 YLCIAVAAGAGTGYFLFS 21 (26)
Confidence 455555677777777653
Done!