Query 032754
Match_columns 134
No_of_seqs 132 out of 1105
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 08:34:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032754.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032754hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fo3_A Ubiquitin-conjugating e 100.0 3.2E-43 1.1E-47 240.0 13.2 117 6-131 6-124 (125)
2 2ucz_A UBC7, ubiquitin conjuga 100.0 1E-42 3.5E-47 247.5 15.1 121 1-126 1-130 (165)
3 1ayz_A UBC2, ubiquitin-conjuga 100.0 7.4E-43 2.5E-47 249.1 14.0 115 1-126 1-116 (169)
4 2aak_A UBC1, ubiquitin conjuga 100.0 3.3E-42 1.1E-46 242.0 14.2 116 1-127 1-117 (152)
5 2h2y_A Ubiquitin-conjugating e 100.0 6.3E-42 2.1E-46 236.6 14.5 114 5-127 19-134 (136)
6 2gjd_A Ubiquitin-conjugating e 100.0 4.8E-42 1.6E-46 242.4 13.9 121 1-126 1-123 (157)
7 3rcz_B SUMO-conjugating enzyme 100.0 4.8E-42 1.6E-46 243.6 13.7 121 4-127 8-130 (163)
8 3h8k_A Ubiquitin-conjugating e 100.0 8.6E-42 2.9E-46 242.5 14.7 120 5-127 2-130 (164)
9 2c2v_B Ubiquitin-conjugating e 100.0 2.5E-42 8.5E-47 243.1 11.7 113 5-126 4-117 (154)
10 1zdn_A Ubiquitin-conjugating e 100.0 6.6E-42 2.3E-46 241.9 13.6 113 5-126 12-125 (158)
11 2e2c_A Ubiquitin conjugating e 100.0 9.4E-42 3.2E-46 240.6 14.2 113 5-126 8-121 (156)
12 4gpr_A Ubiquitin-conjugating e 100.0 1.3E-41 4.6E-46 238.7 14.5 113 5-126 3-116 (151)
13 1z2u_A Ubiquitin-conjugating e 100.0 9.7E-42 3.3E-46 239.2 13.6 113 5-126 3-116 (150)
14 1yh2_A HSPC150 protein similar 100.0 1.6E-41 5.6E-46 242.2 14.6 118 4-126 2-120 (169)
15 3rz3_A Ubiquitin-conjugating e 100.0 1.7E-41 5.9E-46 244.8 14.6 122 1-126 3-133 (183)
16 2c4o_A Ubiquitin-conjugating e 100.0 1.6E-41 5.4E-46 241.4 14.0 113 5-126 18-131 (165)
17 1yrv_A Ubiquitin-conjugating l 100.0 6.2E-42 2.1E-46 244.3 11.7 115 1-126 20-138 (169)
18 2ayv_A Ubiquitin-conjugating e 100.0 1.9E-41 6.5E-46 241.2 14.2 113 5-126 20-133 (166)
19 2a7l_A Hypothetical ubiquitin- 100.0 8E-42 2.7E-46 236.0 11.4 108 8-124 24-136 (136)
20 2awf_A Ubiquitin-conjugating e 100.0 3E-41 1E-45 241.4 14.4 120 4-126 15-143 (172)
21 2r0j_A Ubiquitin carrier prote 100.0 1.3E-41 4.4E-46 238.3 12.2 111 7-126 2-113 (149)
22 1i7k_A Ubiquitin-conjugating e 100.0 1.4E-41 4.7E-46 244.4 12.6 113 5-126 29-142 (179)
23 2grr_A Ubiquitin-conjugating e 100.0 3.4E-41 1.2E-45 238.9 12.9 122 1-127 4-127 (161)
24 2bep_A Ubiquitin-conjugating e 100.0 5.7E-41 1.9E-45 237.3 14.0 115 1-126 5-124 (159)
25 1jat_A Ubiquitin-conjugating e 100.0 2.5E-41 8.5E-46 238.2 11.6 113 5-126 4-117 (155)
26 1fxt_A Ubiquitin-conjugating e 100.0 4.3E-41 1.5E-45 235.6 11.6 112 7-126 2-115 (149)
27 2a4d_A Ubiquitin-conjugating e 100.0 1.8E-40 6.2E-45 234.6 14.1 116 5-126 24-144 (160)
28 3bzh_A Ubiquitin-conjugating e 100.0 3.3E-40 1.1E-44 239.8 14.4 113 5-126 47-160 (194)
29 3k9o_A Ubiquitin-conjugating e 100.0 1.9E-40 6.6E-45 242.5 12.8 115 1-126 2-121 (201)
30 2pwq_A Ubiquitin conjugating e 100.0 1.4E-40 4.8E-45 245.2 11.7 113 5-126 22-136 (216)
31 2f4z_A Tgtwinscan_2721 - E2 do 100.0 5.5E-40 1.9E-44 238.5 12.8 113 5-126 31-158 (193)
32 3fn1_B NEDD8-conjugating enzym 100.0 1.1E-39 3.7E-44 232.3 13.2 118 5-126 13-132 (167)
33 1jat_B Ubiquitin-conjugating e 100.0 5.5E-40 1.9E-44 227.4 11.3 118 1-126 2-124 (138)
34 1tte_A Ubiquitin-conjugating e 100.0 1.5E-40 5E-45 244.9 8.3 113 6-126 2-116 (215)
35 1wzv_A Ubiquitin-conjugating e 100.0 1.1E-39 3.9E-44 229.7 12.2 111 6-126 4-117 (155)
36 2y9m_A Ubiquitin-conjugating e 100.0 2.6E-39 8.8E-44 231.4 13.7 117 1-126 3-133 (172)
37 2hlw_A Ubiquitin-conjugating e 100.0 6.1E-40 2.1E-44 234.1 10.4 116 5-126 34-154 (170)
38 3e46_A Ubiquitin-conjugating e 100.0 3.1E-39 1E-43 242.8 14.0 115 1-126 54-173 (253)
39 2q0v_A Ubiquitin-conjugating e 100.0 3.1E-39 1.1E-43 227.6 12.4 116 5-127 20-140 (156)
40 1y8x_A Ubiquitin-conjugating e 100.0 3.7E-39 1.3E-43 228.2 11.8 111 5-127 5-117 (160)
41 1c4z_D UBCH7, ubiquitin conjug 100.0 2.3E-39 7.9E-44 227.9 8.8 112 7-126 3-115 (154)
42 2nvu_C NEDD8-conjugating enzym 100.0 6.8E-39 2.3E-43 230.6 11.4 111 5-127 25-137 (180)
43 4ds2_A Ubiquitin-conjugating e 100.0 6.7E-39 2.3E-43 228.3 8.7 113 1-124 5-133 (167)
44 2z5d_A Ubiquitin-conjugating e 100.0 4.9E-39 1.7E-43 231.0 7.3 113 1-126 20-135 (179)
45 2onu_A Ubiquitin-conjugating e 100.0 5.4E-39 1.9E-43 225.6 5.8 109 6-126 2-113 (152)
46 1zuo_A Hypothetical protein LO 100.0 1.2E-38 4.1E-43 230.3 7.3 117 5-129 26-159 (186)
47 4ddg_A Ubiquitin-conjugating e 100.0 2.2E-37 7.7E-42 246.0 13.5 113 5-126 2-115 (399)
48 2f4w_A Ubiquitin-conjugating e 100.0 6E-37 2E-41 221.7 12.3 114 5-126 13-127 (187)
49 3o2u_A NEDD8-conjugating enzym 100.0 4.4E-37 1.5E-41 222.8 11.2 110 5-126 28-145 (190)
50 1yf9_A Ubiquitin carrier prote 100.0 9.4E-38 3.2E-42 223.0 7.3 108 6-126 12-122 (171)
51 3ceg_A Baculoviral IAP repeat- 100.0 5.4E-36 1.9E-40 231.2 14.5 116 5-124 75-203 (323)
52 2z6o_A UFM1-conjugating enzyme 99.9 8.2E-30 2.8E-34 178.9 0.0 96 8-116 34-143 (172)
53 3r3q_A Suppressor protein STP2 99.8 3.1E-19 1E-23 125.8 8.2 112 8-129 30-160 (162)
54 3kpa_A Probable ubiquitin fold 99.8 3.3E-20 1.1E-24 127.7 2.1 87 7-111 35-132 (168)
55 3obq_A Tumor susceptibility ge 99.5 1.7E-14 5.9E-19 100.0 8.4 103 11-125 25-138 (146)
56 2ebm_A RWD domain-containing p 96.3 0.043 1.5E-06 36.1 8.9 67 8-80 12-78 (128)
57 2day_A Ring finger protein 25; 95.2 0.21 7.2E-06 32.6 8.9 70 9-80 11-82 (128)
58 2yz0_A Serine/threonine-protei 95.0 0.26 8.9E-06 32.6 9.1 41 39-80 45-85 (138)
59 2ebk_A RWD domain-containing p 94.6 0.11 3.7E-06 34.1 6.2 68 9-80 10-79 (128)
60 3zqs_A E3 ubiquitin-protein li 94.2 0.25 8.5E-06 35.0 7.7 82 9-123 4-86 (186)
61 2daw_A RWD domain containing p 92.2 0.8 2.7E-05 31.1 7.6 23 58-80 76-98 (154)
62 1ukx_A GCN2, GCN2 EIF2alpha ki 91.8 0.1 3.5E-06 34.5 2.6 72 8-80 12-86 (137)
63 2dax_A Protein C21ORF6; RWD do 90.7 0.2 6.8E-06 33.9 3.3 24 58-81 74-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 71.6 2.6 9E-05 19.4 1.8 21 6-26 5-25 (26)
65 2bum_A Protocatechuate 3,4-dio 38.8 28 0.00095 24.7 3.4 25 55-79 109-138 (209)
66 2rf4_B DNA-directed RNA polyme 37.3 15 0.00052 22.5 1.5 12 7-18 63-74 (87)
67 3pft_A Flavin reductase; desul 35.9 15 0.00053 24.5 1.5 31 71-101 42-75 (157)
68 3g9r_A Fusion complex of HIV-1 35.6 28 0.00097 18.0 2.2 14 6-19 28-41 (42)
69 2jrw_A Cyclic extended PEP.1; 32.1 19 0.00066 16.4 1.0 17 70-86 4-20 (26)
70 3kxt_A Chromatin protein CREN7 27.6 71 0.0024 17.8 3.1 11 61-71 46-56 (56)
71 2e6i_A Tyrosine-protein kinase 24.4 26 0.0009 20.2 1.0 18 81-98 13-31 (64)
72 2bum_B Protocatechuate 3,4-dio 23.2 43 0.0015 24.3 2.1 25 55-79 134-165 (241)
73 2xsu_A Catechol 1,2 dioxygenas 23.1 43 0.0015 25.3 2.2 25 55-79 187-229 (312)
74 2d37_A Hypothetical NADH-depen 22.7 22 0.00076 24.2 0.5 29 71-99 60-91 (176)
75 4dac_A Computationally designe 22.4 71 0.0024 14.7 2.1 15 7-21 9-23 (28)
76 2azq_A Catechol 1,2-dioxygenas 22.0 46 0.0016 25.2 2.2 24 56-79 184-225 (311)
77 1tmx_A Hydroxyquinol 1,2-dioxy 21.8 48 0.0016 24.9 2.2 25 55-79 183-225 (293)
78 1m46_B IQ4, IQ4 motif from MYO 21.5 63 0.0021 14.7 1.7 13 7-19 9-21 (26)
79 2ecu_A Flavin reductase (HPAC) 21.2 13 0.00046 24.5 -0.9 31 71-101 40-73 (149)
80 1f53_A Yeast killer toxin-like 21.1 34 0.0012 20.5 1.0 12 68-79 70-81 (84)
81 2ccv_A Helix pomatia agglutini 20.7 1.5E+02 0.0052 18.2 4.1 25 55-80 27-51 (101)
82 3t63_M 3,4-PCD, protocatechuat 20.3 53 0.0018 23.8 2.1 25 55-79 133-164 (238)
No 1
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=3.2e-43 Score=240.01 Aligned_cols=117 Identities=25% Similarity=0.393 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCC-cc
Q 032754 6 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGF-FH 84 (134)
Q Consensus 6 ~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~H 84 (134)
.|.+||++|+++|+++++.|+++.+.++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++ ||
T Consensus 6 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~----~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~H 81 (125)
T 2fo3_A 6 NANYRIQKELHNFLNNPPINCTLDVHPN----NIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKH 81 (125)
T ss_dssp ---CHHHHHHHHHHHSCCTTEEEEECTT----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCB
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCcc----hhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCC
Confidence 5789999999999999999999988765 999999999999999999999999999999999999999999997 99
Q ss_pred CCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCCcchhc
Q 032754 85 PNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISSLDDMM 131 (134)
Q Consensus 85 PnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~~~d~~ 131 (134)
|||+.+|+||+++|.+ +|+|++ |++||++|+++|.++-.+.+
T Consensus 82 Pnv~~~G~iCl~iL~~-----~W~P~~~i~~vl~si~~ll~~p~~~~~ 124 (125)
T 2fo3_A 82 THVYSNGDICLSLLGD-----DYNPSLSISGLVLSIISMLSSAKEKKL 124 (125)
T ss_dssp TTBCTTSBBCCGGGTT-----TCCTTCCHHHHHHHHHHHHC-------
T ss_pred CcCCCCCEEEchhcCC-----CCCCCCcHHHHHHHHHHHHhCcccccC
Confidence 9999999999999986 799999 99999999999998877654
No 2
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1e-42 Score=247.55 Aligned_cols=121 Identities=36% Similarity=0.664 Sum_probs=110.0
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecC
Q 032754 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (134)
Q Consensus 1 Ms~~~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (134)
|| +.|.+||++|+++|+++++.|+++.+.+++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|
T Consensus 1 M~--~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~---~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t 75 (165)
T 2ucz_A 1 MS--KTAQKRLLKELQQLIKDSPPGIVAGPKSEN---NIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTP 75 (165)
T ss_dssp -C--HHHHHHHHHHHHHHHHSCCTTEEEEESSSS---CCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CC--hHHHHHHHHHHHHHHhCCCCCEEEEECCCC---CccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeC
Confidence 88 899999999999999999999999987643 9999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCCceeeccCCCCC--------CCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 81 GFFHPNVYPSGTVCLSILNEDN--------VSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 81 ~i~HPnV~~~G~vcl~~l~~~~--------~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
++|||||+.+|+||+++|..+. ..++|+|++ |++||++|+++|.+|
T Consensus 76 ~i~HPNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~P 130 (165)
T 2ucz_A 76 SILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEP 130 (165)
T ss_dssp CCSCTTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSC
T ss_pred CCccCCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCC
Confidence 9999999999999999994210 023899999 999999999998775
No 3
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=7.4e-43 Score=249.10 Aligned_cols=115 Identities=37% Similarity=0.645 Sum_probs=109.7
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecC
Q 032754 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (134)
Q Consensus 1 Ms~~~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (134)
|| +.+.+||++|+++|+++++.|+.+.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 1 Ms--~~a~~RL~kEl~~l~~~~~~gi~~~p~~~----nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t 74 (169)
T 1ayz_A 1 MS--TPARRRLMRDFKRMKEDAPPGVSASPLPD----NVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLS 74 (169)
T ss_dssp -C--CHHHHHHHHHHHHHHHSCCTTEEEEEETT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CC--hHHHHHHHHHHHHHHhCCCCCEEEEecCC----ccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCcccccc
Confidence 88 78999999999999999999999998865 9999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 81 GFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 81 ~i~HPnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
+||||||+.+|+||+++|.+ +|+|++ |++||++|+++|..|
T Consensus 75 ~i~HPNI~~~G~ICl~iL~~-----~WsP~~~i~~vL~si~~ll~~P 116 (169)
T 1ayz_A 75 EMFHPNVYANGEICLDILQN-----RWTPTYDVASILTSIQSLFNDP 116 (169)
T ss_dssp CCCCTTBCTTSBBCCGGGTT-----TCCTTCCHHHHHHHHHHHHTCC
T ss_pred CCccCCCCCCCeEeehhhcc-----CCCCcCcHHHHHHHHHHHHhCC
Confidence 99999999999999999987 799999 999999999998774
No 4
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=3.3e-42 Score=242.04 Aligned_cols=116 Identities=37% Similarity=0.722 Sum_probs=110.9
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecC
Q 032754 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (134)
Q Consensus 1 Ms~~~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (134)
|| +.+.+||++|+++|+++++.|+++.+.++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|
T Consensus 1 Ms--~~a~~RL~~E~~~l~~~~~~~i~~~~~~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 74 (152)
T 2aak_A 1 MS--TPARKRLMRDFKRLQQDPPAGISGAPQDN----NIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVS 74 (152)
T ss_dssp CC--CHHHHHHHHHHHHHHHSCCTTEEEEEETT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CC--hHHHHHHHHHHHHHHhCCCCCEEEEeCCC----CccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEec
Confidence 88 88999999999999999999999988865 9999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCCc
Q 032754 81 GFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISSL 127 (134)
Q Consensus 81 ~i~HPnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~~ 127 (134)
++|||||+.+|+||+++|.+ +|+|++ |++||.+|+++|.++.
T Consensus 75 ~i~HPnv~~~G~iCl~iL~~-----~W~p~~~i~~vl~~i~~ll~~p~ 117 (152)
T 2aak_A 75 RMFHPNIYADGSICLDILQN-----QWSPIYDVAAILTSIQSLLCDPN 117 (152)
T ss_dssp CCCCTTBCTTSBBCCGGGTT-----SCCTTCCHHHHHHHHHHHHTSCC
T ss_pred CcccCCCCCCCEEechhhcC-----CCCCCCcHHHHHHHHHHHHhCCC
Confidence 99999999999999999987 799999 9999999999988753
No 5
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.3e-42 Score=236.65 Aligned_cols=114 Identities=25% Similarity=0.409 Sum_probs=108.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCC-c
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGF-F 83 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~ 83 (134)
+.+.+||++|+++|+++++.|+++.+.++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++ |
T Consensus 19 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~----nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~ 94 (136)
T 2h2y_A 19 GNANYRIQKELNNFLKNPPINCTIDVHPS----NIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPK 94 (136)
T ss_dssp TSHHHHHHHHHHHHHHSCCTTEEEEECTT----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCeEEEeccc----cccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCC
Confidence 46889999999999999999999988765 999999999999999999999999999999999999999999996 9
Q ss_pred cCCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCCc
Q 032754 84 HPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISSL 127 (134)
Q Consensus 84 HPnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~~ 127 (134)
||||+.+|+||+++|.+ +|+|++ |++||++|+++|.++-
T Consensus 95 HPnv~~~G~ICl~iL~~-----~WsP~~ti~~vL~si~sll~~p~ 134 (136)
T 2h2y_A 95 HTHVYSNGDICLSVLGD-----DYNPSLSISGLILSIISMLSSAK 134 (136)
T ss_dssp CTTBCTTCCBCCGGGTT-----TCCTTCCHHHHHHHHHHHHSSSC
T ss_pred CCcCCCCCEEECccccC-----CCCCCCcHHHHHHHHHHHHhCcC
Confidence 99999999999999987 799999 9999999999988764
No 6
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=4.8e-42 Score=242.36 Aligned_cols=121 Identities=59% Similarity=1.053 Sum_probs=110.4
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCeEEeecCC-CCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeec
Q 032754 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETK-DGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFP 79 (134)
Q Consensus 1 Ms~~~~~~kRl~~El~~l~~~~~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~ 79 (134)
|| +.+.+||++|+++|+++++.|+.+.+.++ ++..|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 1 Ms--~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 78 (157)
T 2gjd_A 1 MS--SLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFP 78 (157)
T ss_dssp ----CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECC
T ss_pred CC--hHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeecc
Confidence 88 78999999999999999999999988752 3334899999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 80 QGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 80 t~i~HPnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|++|||||+.+|+||+++|..++ +|+|++ |++||++|+++|.+|
T Consensus 79 t~i~HPnv~~~G~iCl~iL~~~~---~W~p~~~i~~vl~~i~~ll~~p 123 (157)
T 2gjd_A 79 AGFYHPNVYPSGTICLSILNEDQ---DWRPAITLKQIVLGVQDLLDSP 123 (157)
T ss_dssp TTCCCTTBCTTSBBCCGGGCTTT---TCCTTCCHHHHHHHHHHHHTSC
T ss_pred CCCccCCCCCCCcEeeecccCCC---CCCCCCcHHHHHHHHHHHHhCC
Confidence 99999999999999999998743 699999 999999999999775
No 7
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=4.8e-42 Score=243.62 Aligned_cols=121 Identities=51% Similarity=0.974 Sum_probs=111.6
Q ss_pred chHHHHHHHHHHHHHHHcCCCCeEEeecCC-CCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCC
Q 032754 4 GGIARGRLTEERKAWRKNHPHGFVAKPETK-DGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGF 82 (134)
Q Consensus 4 ~~~~~kRl~~El~~l~~~~~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i 82 (134)
...|.+||++|+++|++++++|+++.+.++ |+..|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 478999999999999999999999998764 4455899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCCc
Q 032754 83 FHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISSL 127 (134)
Q Consensus 83 ~HPnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~~ 127 (134)
|||||+.+|+||+++|...+ +|+|++ |++||++|+++|.+|-
T Consensus 88 ~HPnV~~~G~iCl~iL~~~~---~W~p~~ti~~vL~~i~~ll~~P~ 130 (163)
T 3rcz_B 88 FHPNVYPSGTVCLSILNEEE---GWKPAITIKQILLGIQDLLDDPN 130 (163)
T ss_dssp CSTTBCTTSBBCCGGGCTTT---TCCTTCCHHHHHHHHHHHHTSCC
T ss_pred ccCCCCCCCcEeccccCCCC---CcCCcCcHHHHHHHHHHHHhCCC
Confidence 99999999999999998733 699999 9999999999997743
No 8
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=8.6e-42 Score=242.54 Aligned_cols=120 Identities=38% Similarity=0.606 Sum_probs=109.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCcc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (134)
+.|.|||++|+++|+++++.|+++.+.+++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~---nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEE---NFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFH 78 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTT---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCC---CccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCcc
Confidence 678999999999999999999999887754 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeccCCCCC--------CCCCCChHH-HHHHHHHHHHhhCCCc
Q 032754 85 PNVYPSGTVCLSILNEDN--------VSSSCRFVI-YFQIMYGSGLAKISSL 127 (134)
Q Consensus 85 PnV~~~G~vcl~~l~~~~--------~~~~W~p~~-i~~vl~~i~~~l~~~~ 127 (134)
|||+.+|+||+++|..+. .+++|+|++ |++||++|+++|.+|-
T Consensus 79 PNV~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn 130 (164)
T 3h8k_A 79 PNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPN 130 (164)
T ss_dssp TTBCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCC
T ss_pred CCCCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCC
Confidence 999999999999997321 123899999 9999999999988743
No 9
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.5e-42 Score=243.13 Aligned_cols=113 Identities=26% Similarity=0.490 Sum_probs=108.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCcc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (134)
..+.+||++|+++|+++++.|+++.+.++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+|||
T Consensus 4 ~~~~~RL~kEl~~l~~~~~~~i~~~~~~~----~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (154)
T 2c2v_B 4 AGLPRRIIKETQRLLAEPVPGIKAEPDES----NARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYH 79 (154)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEECSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCC----chheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCccc
Confidence 67889999999999999999999998875 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 85 PNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 85 PnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|||+.+|+||+++|.+ +|+|++ |++||++|+++|.++
T Consensus 80 Pnv~~~G~iCl~iL~~-----~W~p~~~i~~vl~~i~~ll~~p 117 (154)
T 2c2v_B 80 PNVDKLGRICLDILKD-----KWSPALQIRTVLLSIQALLSAP 117 (154)
T ss_dssp TTBCTTCBBCCHHHHT-----SCCTTCCHHHHHHHHHHHTTSC
T ss_pred CcCccCCeEEchhccC-----CCCCCCcHHHHHHHHHHHHhCC
Confidence 9999999999999986 799999 999999999998874
No 10
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.6e-42 Score=241.87 Aligned_cols=113 Identities=25% Similarity=0.468 Sum_probs=108.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCcc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (134)
..+.+||++|+++|+++++.|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 12 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 87 (158)
T 1zdn_A 12 PHIIRLVYKEVTTLTADPPDGIKVFPNEE----DLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFH 87 (158)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEECSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCC----ChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCccc
Confidence 77899999999999999999999998765 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 85 PNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 85 PnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|||+.+|+||+++|.+ +|+|++ |++||++|+++|..+
T Consensus 88 Pnv~~~G~iCl~iL~~-----~W~p~~~i~~vL~~i~~ll~~p 125 (158)
T 1zdn_A 88 PNVGANGEICVNVLKR-----DWTAELGIRHVLLTIKCLLIHP 125 (158)
T ss_dssp TTBCTTSBBCHHHHTT-----TCCTTCCHHHHHHHHHHHHHSC
T ss_pred CCCCCCCEEehhhcCC-----CCCCCCcHHHHHHHHHHHHhCC
Confidence 9999999999999987 799999 999999999998764
No 11
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=9.4e-42 Score=240.62 Aligned_cols=113 Identities=32% Similarity=0.475 Sum_probs=108.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCcc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (134)
+.+.+||++|+++|+++++.|+++.+.++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++||
T Consensus 8 ~~~~~RL~kEl~~l~~~~~~~i~~~p~~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 83 (156)
T 2e2c_A 8 HSVSKRLQQELRTLLMSGDPGITAFPDGD----NLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWH 83 (156)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTEEEEESSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECCC----CccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCccc
Confidence 56899999999999999999999988765 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 85 PNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 85 PnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|||+.+|+||+++|.+ +|+|++ |++||++|+++|.++
T Consensus 84 Pnv~~~G~iCl~iL~~-----~W~p~~~i~~vL~si~~ll~~p 121 (156)
T 2e2c_A 84 PNVDQSGNICLDILKE-----NWTASYDVRTILLSLQSLLGEP 121 (156)
T ss_dssp TTBCTTCBBCCGGGTT-----TCCTTCCHHHHHHHHHHHTTSC
T ss_pred CCCccCceEECccccc-----cCCCCCcHHHHHHHHHHHHhCC
Confidence 9999999999999987 799999 999999999998774
No 12
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=1.3e-41 Score=238.69 Aligned_cols=113 Identities=25% Similarity=0.540 Sum_probs=108.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCcc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (134)
+.|.|||++|+++|+++++.|+++.+.++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++||
T Consensus 3 ~~a~~RL~kEl~~l~~~~~~~i~~~p~~~----nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 78 (151)
T 4gpr_A 3 AMAMRRIQKELREIQQDPPCNCSAGPVGD----DIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYH 78 (151)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSS----CTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEEcCC----CceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCccc
Confidence 67899999999999999999999999875 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 85 PNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 85 PnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|||+.+|+||+++|.+ +|+|++ |++||++|+++|.++
T Consensus 79 Pnv~~~G~iCl~iL~~-----~W~p~~~i~~vl~~i~~ll~~p 116 (151)
T 4gpr_A 79 PNINKNGVICLDILKD-----QWSPALTLSRVLLSISSLLTDP 116 (151)
T ss_dssp TTBCTTCBBCCGGGTT-----TCCTTCCHHHHHHHHHHHHHCC
T ss_pred ceECCCCEEEcccccC-----CCCCCCcHHHHHHHHHHHhcCC
Confidence 9999999999999987 899999 999999999998874
No 13
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=9.7e-42 Score=239.16 Aligned_cols=113 Identities=28% Similarity=0.556 Sum_probs=108.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCcc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (134)
..+.+||++|+++|+++++.|+++.+.++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+|||
T Consensus 3 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (150)
T 1z2u_A 3 HMALKRIQKELQDLGRDPPAQCSAGPVGD----DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 78 (150)
T ss_dssp CHHHHHHHHHHHHHHHSCCSSEEEEEETT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECCC----cceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCccc
Confidence 67899999999999999999999998775 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 85 PNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 85 PnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|||+.+|+||+++|.+ +|+|++ |++||++|+++|.++
T Consensus 79 Pnv~~~G~iCl~iL~~-----~W~p~~~i~~vl~~i~~ll~~p 116 (150)
T 1z2u_A 79 PNINSNGSICLDILRS-----QWSPALTISKVLLSICSLLCDP 116 (150)
T ss_dssp TTBCTTCBBCCGGGTT-----TCCTTCCHHHHHHHHHHHHHSC
T ss_pred CcCCCCCeEeeccccC-----CCCCCCCHHHHHHHHHHHhhCC
Confidence 9999999999999997 799999 999999999998754
No 14
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-41 Score=242.21 Aligned_cols=118 Identities=23% Similarity=0.401 Sum_probs=109.0
Q ss_pred chHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCc
Q 032754 4 GGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF 83 (134)
Q Consensus 4 ~~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (134)
...+.+||++|+++|+++++.|+++.+.++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~----~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 77 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKD----QMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIY 77 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCC----chheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCc
Confidence 367899999999999999999999998775 9999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 84 HPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 84 HPnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
||||+.+|+||+++|..+ ..++|+|++ |++||++|+++|.++
T Consensus 78 HPNv~~~G~iCl~iL~~~-~~~~W~p~~~i~~vL~si~~ll~~p 120 (169)
T 1yh2_A 78 HPNIDSAGRICLDVLKLP-PKGAWRPSLNIATVLTSIQLLMSEP 120 (169)
T ss_dssp BTTBCTTCBBCCGGGSCT-TTSCCCTTSCHHHHHHHHHHHHHSC
T ss_pred cccCCcCCeEecccccCC-cccCCCCCCcHHHHHHHHHHHHhCC
Confidence 999999999999999821 011799999 999999999998774
No 15
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=1.7e-41 Score=244.81 Aligned_cols=122 Identities=30% Similarity=0.474 Sum_probs=107.0
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecC
Q 032754 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (134)
Q Consensus 1 Ms~~~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (134)
|++ +.+.|||++|+++|+++++.|+++.+.+++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|
T Consensus 3 m~~-~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~---nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 78 (183)
T 3rz3_A 3 MGS-PSSQKALLLELKGLQEEPVEGFRVTLVDEG---DLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLT 78 (183)
T ss_dssp --C-CHHHHHHHHHHHHHHHSCCTTEEEEECTTC---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred Ccc-hHHHHHHHHHHHHHHhCCCCCEEEEecCcc---chhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecC
Confidence 553 678999999999999999999999855443 9999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCCceeeccCCCCC--------CCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 81 GFFHPNVYPSGTVCLSILNEDN--------VSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 81 ~i~HPnV~~~G~vcl~~l~~~~--------~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
++|||||+.+|+||+++|..+. ..++|+|++ |++||++|+++|.+|
T Consensus 79 ~i~HPnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~P 133 (183)
T 3rz3_A 79 KMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEP 133 (183)
T ss_dssp CCCCTTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSC
T ss_pred CCccCCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCC
Confidence 9999999999999999997310 013899999 999999999998774
No 16
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.6e-41 Score=241.44 Aligned_cols=113 Identities=27% Similarity=0.560 Sum_probs=108.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCcc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (134)
+.+.+||++|+++|+++++.|+++.+.++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+|||
T Consensus 18 ~~~~~RL~kEl~~l~~~~~~gi~~~p~~~----nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~H 93 (165)
T 2c4o_A 18 SMALKRIHKELNDLARDPPAQCSAGPVGD----DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 93 (165)
T ss_dssp HHHHHHHHHHHHHHHSSCCTTEEEEESSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCC----CcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcC
Confidence 66899999999999999999999998765 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 85 PNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 85 PnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|||+.+|+||+++|.+ +|+|++ |++||++|+++|.++
T Consensus 94 PnV~~~G~ICl~iL~~-----~W~P~~ti~~vL~si~~ll~~p 131 (165)
T 2c4o_A 94 PNINSNGSICLDILRS-----QWSPALTISKVLLSICSLLCDP 131 (165)
T ss_dssp TTBCTTCBBCCGGGTT-----TCCTTCCHHHHHHHHHHHHHSC
T ss_pred CcCCCCCeEeehhhcC-----CCCCcCcHHHHHHHHHHHHhCC
Confidence 9999999999999997 799999 999999999998764
No 17
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.2e-42 Score=244.30 Aligned_cols=115 Identities=30% Similarity=0.489 Sum_probs=109.6
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecC
Q 032754 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (134)
Q Consensus 1 Ms~~~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (134)
|+ +.+.+||++|+++|++++++|+.+.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 20 M~--~~a~~RL~kEl~~l~~~~~~gi~~~p~~~----nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T 93 (169)
T 1yrv_A 20 MH--GRAYLLLHRDFCDLKENNYKGITAKPVSE----DMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFIT 93 (169)
T ss_dssp GG--CHHHHHHHHHHHHHHHHCCTTEEEEECST----TSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESS
T ss_pred cC--hHHHHHHHHHHHHHHhCCCCCEEEEEcCC----ccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecC
Confidence 66 78999999999999999999999988775 9999999999999999999999999999999999999999999
Q ss_pred CCccCCC-CCCCceeeccCC--CCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 81 GFFHPNV-YPSGTVCLSILN--EDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 81 ~i~HPnV-~~~G~vcl~~l~--~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
+|||||| +.+|+||+++|. + +|+|++ |++||++|+++|.+|
T Consensus 94 ~i~HPNI~~~~G~ICL~iL~~~~-----~WsP~~ti~~vL~sI~sll~~P 138 (169)
T 1yrv_A 94 IPFHPNVDPHTGQPCIDFLDNPE-----KWNTNYTLSSILLALQVMLSNP 138 (169)
T ss_dssp CCCCTTBCTTTCCBCCHHHHCGG-----GCCTTCCHHHHHHHHHHHHTSC
T ss_pred CCccCcccCCCCeEeehhhcCCc-----CCCCcCCHHHHHHHHHHHHhCC
Confidence 9999999 899999999998 4 799999 999999999998875
No 18
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.9e-41 Score=241.20 Aligned_cols=113 Identities=27% Similarity=0.551 Sum_probs=108.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCcc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (134)
+.+.+||++|+++|+++++.|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~~----nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 95 (166)
T 2ayv_A 20 QGALKRINKELNDLSKDPPTNCSAGPVGD----DMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYH 95 (166)
T ss_dssp TTHHHHHHHHHHHHHHSCCTTEEEEECSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCC----CcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcC
Confidence 56899999999999999999999998765 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 85 PNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 85 PnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|||+.+|+||+++|.+ +|+|++ |++||++|+++|.++
T Consensus 96 PNI~~~G~ICL~iL~~-----~WsP~~ti~~vL~sI~sll~~p 133 (166)
T 2ayv_A 96 PNINSQGAICLDILKD-----QWSPALTISKVLLSISSLLTDP 133 (166)
T ss_dssp TTBCTTCBBCCGGGTT-----TCCTTCCHHHHHHHHHHHHHSC
T ss_pred CcCCCCCeEEcccccc-----cCCCCCcHHHHHHHHHHHHhCC
Confidence 9999999999999997 799999 999999999998774
No 19
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8e-42 Score=236.01 Aligned_cols=108 Identities=29% Similarity=0.482 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHcCCCCeEEe--ecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCc--
Q 032754 8 RGRLTEERKAWRKNHPHGFVAK--PETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF-- 83 (134)
Q Consensus 8 ~kRl~~El~~l~~~~~~~~~~~--~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~-- 83 (134)
.+||++|+++|++++++|+++. +.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~~----nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~ 99 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQN----SITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPV 99 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCC----SCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCcc----ccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCC
Confidence 4999999999999999999865 5444 9999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhC
Q 032754 84 HPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKI 124 (134)
Q Consensus 84 HPnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~ 124 (134)
||||+.+|+||+++|.+ +|+|++ |++||++|+++|.
T Consensus 100 HPNV~~~G~ICL~iL~~-----~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 100 HPHVYSNGHICLSILTE-----DWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp BTTBCTTCBBCCGGGTT-----TCCTTSCHHHHHHHHHHHTC
T ss_pred CccCCCCCeEEchhcCC-----CCCCCCcHHHHHHHHHHHhC
Confidence 99999999999999987 899999 9999999999873
No 20
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=3e-41 Score=241.45 Aligned_cols=120 Identities=33% Similarity=0.454 Sum_probs=109.6
Q ss_pred chHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCc
Q 032754 4 GGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF 83 (134)
Q Consensus 4 ~~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (134)
.+.+.+||++|+++|+++++.|+++.+.+++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||
T Consensus 15 ~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~---nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~ 91 (172)
T 2awf_A 15 VPRGSLLLRRQLAELNKNPVEGFSAGLIDDN---DLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIW 91 (172)
T ss_dssp CCTTHHHHHHHHHHHHHSCCTTEEEEESSTT---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCc---cccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCc
Confidence 4678999999999999999999999987643 9999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceeeccCCCCC--------CCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 84 HPNVYPSGTVCLSILNEDN--------VSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 84 HPnV~~~G~vcl~~l~~~~--------~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
||||+.+|+||+++|..+. ..++|+|++ |++||++|+++|.+|
T Consensus 92 HPNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~P 143 (172)
T 2awf_A 92 HPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADP 143 (172)
T ss_dssp CTTBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC
T ss_pred cCCCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCc
Confidence 9999999999999997310 123799999 999999999998874
No 21
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.3e-41 Score=238.31 Aligned_cols=111 Identities=30% Similarity=0.585 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCccCC
Q 032754 7 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPN 86 (134)
Q Consensus 7 ~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 86 (134)
+.+||++|+++|+++++.|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 77 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPE----NYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPN 77 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCC----cccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCC
Confidence 469999999999999999999998775 9999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 87 VYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 87 V~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|+.+|+||+++|.+ +|+|++ |++||++|+++|.++
T Consensus 78 v~~~G~iCl~iL~~-----~W~p~~~i~~vl~~i~~ll~~p 113 (149)
T 2r0j_A 78 IDKLGRICLDILKD-----KWSPALQIRTVLLSIQALLSSP 113 (149)
T ss_dssp BCTTCBBCCGGGTT-----TCCTTSCHHHHHHHHHHHHHSC
T ss_pred CCCCCEEechhcCC-----CCCCCCcHHHHHHHHHHHHhCC
Confidence 99999999999987 799999 999999999998765
No 22
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-41 Score=244.37 Aligned_cols=113 Identities=30% Similarity=0.437 Sum_probs=107.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCcc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (134)
+.+.+||++|+++|+++++.||++.+.++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+|||
T Consensus 29 ~~~~~RL~kEl~~l~~~~~~gi~~~p~~~----nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 104 (179)
T 1i7k_A 29 GPVGKRLQQELMTLMMSGDKGISAFPESD----NLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYH 104 (179)
T ss_dssp -CHHHHHHHHHHHHHHHCCTTEEEEEETT----EEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCS
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEEcCC----cccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCcc
Confidence 67889999999999999999999998765 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 85 PNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 85 PnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|||+.+|+||+++|.+ +|+|++ |++||++|+++|.++
T Consensus 105 PNV~~~G~ICL~iL~~-----~WsP~~ti~~vL~sI~sll~~P 142 (179)
T 1i7k_A 105 PNVDTQGNISLDILKE-----KWSALYDVRTILLSIQSLLGEP 142 (179)
T ss_dssp TTBCTTCBBCCGGGTT-----TCCTTCCHHHHHHHHHHHHHSC
T ss_pred CccccCCeEEcccCcC-----cCCCCCCHHHHHHHHHHHHhCC
Confidence 9999999999999987 799999 999999999998764
No 23
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=3.4e-41 Score=238.86 Aligned_cols=122 Identities=61% Similarity=1.090 Sum_probs=111.5
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCeEEeecC-CCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeec
Q 032754 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPET-KDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFP 79 (134)
Q Consensus 1 Ms~~~~~~kRl~~El~~l~~~~~~~~~~~~~~-~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~ 79 (134)
|| +.+.+||++|+++|+++++.|+.+.+.. +++.+|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 4 M~--~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 81 (161)
T 2grr_A 4 MS--GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFE 81 (161)
T ss_dssp CC--HHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred cc--HHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEe
Confidence 77 7899999999999999999999998864 22334999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCCc
Q 032754 80 QGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISSL 127 (134)
Q Consensus 80 t~i~HPnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~~ 127 (134)
|++|||||+.+|+||+++|...+ +|+|++ |++||++|+++|.+|.
T Consensus 82 t~i~HPnv~~~G~iCl~iL~~~~---~W~p~~~i~~vl~~i~~ll~~p~ 127 (161)
T 2grr_A 82 PPLFHPNVYPSGTVCLSILEEDK---DWRPAITIKQILLGIQELLNEPN 127 (161)
T ss_dssp SCCCSTTBCTTSBBCCGGGCTTT---TCCTTCCHHHHHHHHHHHHHSCC
T ss_pred cCcccCCCCCCCeEeehhcCCCC---CcCCCCcHHHHHHHHHHHHhCCC
Confidence 99999999999999999998632 799999 9999999999987753
No 24
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=5.7e-41 Score=237.30 Aligned_cols=115 Identities=26% Similarity=0.448 Sum_probs=108.3
Q ss_pred CCcchHHHHHHHHHHHHHHHc---CCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeee
Q 032754 1 MSGGGIARGRLTEERKAWRKN---HPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCK 77 (134)
Q Consensus 1 Ms~~~~~~kRl~~El~~l~~~---~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~ 77 (134)
|| +.+.+||++|+++|+++ ++.|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+
T Consensus 5 Ms--~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~ 78 (159)
T 2bep_A 5 MA--NIAVQRIKREFKEVLKSEETSKNQIKVDLVDE----NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVR 78 (159)
T ss_dssp CC--HHHHHHHHHHHHHHHHCHHHHTTSEEEEECSS----SSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEE
T ss_pred ch--HHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCC----chheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEE
Confidence 66 78999999999999985 588999999876 9999999999999999999999999999999999999999
Q ss_pred ecCCCccCCCC-CCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 78 FPQGFFHPNVY-PSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 78 f~t~i~HPnV~-~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|.|+||||||+ .+|+||+++|.+ +|+|++ |++||++|+++|.++
T Consensus 79 f~t~i~HPni~~~~G~iCl~iL~~-----~W~p~~~i~~vl~~i~~ll~~p 124 (159)
T 2bep_A 79 FITKIWHPNISSVTGAICLDILKD-----QWAAAMTLRTVLLSLQALLAAA 124 (159)
T ss_dssp ESSCCCBTTBCTTTCBBCCGGGTT-----TCCTTCCHHHHHHHHHHHHHSC
T ss_pred eeCCCCccCCCCCCCEEeChhhhc-----cCCCCCcHHHHHHHHHHHHhCC
Confidence 99999999998 599999999997 799999 999999999998775
No 25
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=2.5e-41 Score=238.25 Aligned_cols=113 Identities=26% Similarity=0.504 Sum_probs=107.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCcc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (134)
+.+.+||++|+++|++++++|+++.+.++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++||
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~~~----~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPHDD----NLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYH 79 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEETT----EEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCB
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCC----chhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeeccccc
Confidence 45789999999999999999999998775 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 85 PNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 85 PnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|||+.+|+||+++|.+ +|+|++ |++||++|+++|.++
T Consensus 80 Pnv~~~G~iCl~iL~~-----~W~p~~~i~~vl~~i~~ll~~p 117 (155)
T 1jat_A 80 PNIDRLGRICLDVLKT-----NWSPALQIRTVLLSIQALLASP 117 (155)
T ss_dssp TTBCTTCCBCCGGGTT-----TCCTTCCHHHHHHHHHHHHHSC
T ss_pred CCCCCCCEEEchhhcc-----CCCCCCCHHHHHHHHHHHHhCC
Confidence 9999999999999987 799999 999999999998875
No 26
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=4.3e-41 Score=235.61 Aligned_cols=112 Identities=25% Similarity=0.435 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCccCC
Q 032754 7 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPN 86 (134)
Q Consensus 7 ~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 86 (134)
+.+||++|+++|+++++.|+++.+.+++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~---~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSES---DIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPN 78 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSS---CSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCC---CceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCC
Confidence 3799999999999999999999998754 8999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 87 VYP-SGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 87 V~~-~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|+. +|+||+++|.+ +|+|++ |++||++|+++|.++
T Consensus 79 i~~~~G~iCl~iL~~-----~W~p~~~i~~vl~~i~~ll~~p 115 (149)
T 1fxt_A 79 ISSVTGAICLDILKN-----AWSPVITLKSALISLQALLQSP 115 (149)
T ss_dssp BCSSSCCBCCHHHHT-----SCCTTCCHHHHHHHHHHHHHSC
T ss_pred CcCCCCeEeCCcCCC-----CCCCCCcHHHHHHHHHHHHhCC
Confidence 998 99999999987 799999 999999999998775
No 27
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=1.8e-40 Score=234.65 Aligned_cols=116 Identities=20% Similarity=0.220 Sum_probs=104.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCC-eEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCc
Q 032754 5 GIARGRLTEERKAWRKNHPHG-FVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF 83 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~-~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (134)
..+.+||++|+++|++++++| +++.+.+++ +.|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~-d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 102 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDE-DMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 102 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTT-CTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEecCCc-cccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCce
Confidence 568899999999999999888 777774432 113899999999999999999999999999999999999999999999
Q ss_pred cCCCC-CCCceeeccCC--CCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 84 HPNVY-PSGTVCLSILN--EDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 84 HPnV~-~~G~vcl~~l~--~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
||||+ .+|+||+++|. + +|+|++ |++||++|+++|.++
T Consensus 103 HPNV~~~~G~ICl~iL~~~~-----~WsP~~ti~~vL~sI~~ll~~~ 144 (160)
T 2a4d_A 103 MNGVNSSNGVVDPRAISVLA-----KWQNSYSIKVVLQELRRLMMSK 144 (160)
T ss_dssp CTTBCTTTCBBCGGGSHHHH-----TCCTTCCHHHHHHHHHHHHTST
T ss_pred eCCEECCCCEEehhhcCCcc-----CCCccCcHHHHHHHHHHHHccC
Confidence 99998 69999999998 5 799999 999999999999763
No 28
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=3.3e-40 Score=239.84 Aligned_cols=113 Identities=27% Similarity=0.518 Sum_probs=107.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCcc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (134)
+.+.+||++|+++|+++++.||.+.+.++ |+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.|+|||
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~----nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 122 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGD----NIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYH 122 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccC----ccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCcc
Confidence 45789999999999999999999998765 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 85 PNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 85 PnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|||+.+|+||+++|.+ +|+|++ |++||++|+++|..+
T Consensus 123 PNV~~~G~ICL~iL~~-----~WsP~~ti~~vL~sI~~ll~~p 160 (194)
T 3bzh_A 123 CNINSQGVICLDILKD-----NWSPALTISKVLLSICSLLTDC 160 (194)
T ss_dssp TTBCTTCBBCCGGGTT-----TCCTTCCHHHHHHHHHHHHHSC
T ss_pred ceECCCCceechhhhc-----cCCCcCcHHHHHHHHHHHHhCC
Confidence 9999999999999987 799999 999999999998774
No 29
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1.9e-40 Score=242.45 Aligned_cols=115 Identities=26% Similarity=0.448 Sum_probs=106.9
Q ss_pred CCcchHHHHHHHHHHHHHHHc---CCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeee
Q 032754 1 MSGGGIARGRLTEERKAWRKN---HPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCK 77 (134)
Q Consensus 1 Ms~~~~~~kRl~~El~~l~~~---~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~ 77 (134)
|| +.|.+||++|+++|+++ ++.|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+
T Consensus 2 Ms--~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~----nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~ 75 (201)
T 3k9o_A 2 MA--NIAVQRIKREFKEVLKSEETSKNQIKVDLVDE----NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVR 75 (201)
T ss_dssp ----CTTHHHHHHHHHHHHTCHHHHTTSEEEEECST----TSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred Cc--HHHHHHHHHHHHHHHhCCCCCCCCEEEEECCC----CccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccc
Confidence 78 78999999999999986 378999999876 9999999999999999999999999999999999999999
Q ss_pred ecCCCccCCCC-CCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 78 FPQGFFHPNVY-PSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 78 f~t~i~HPnV~-~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|.|+||||||+ .+|+||+++|.+ +|+|++ |++||++|+++|.++
T Consensus 76 f~t~i~HPnv~~~~G~iCl~iL~~-----~W~p~~~i~~vL~~i~~ll~~p 121 (201)
T 3k9o_A 76 FITKIWHPNISSVTGAICLDILKD-----QWAAAMTLRTVLLSLQALLAAA 121 (201)
T ss_dssp ESSCCCBTTBCTTTCBBCCGGGTT-----TCCTTCCHHHHHHHHHHHHHSC
T ss_pred cccCcccCCCcCCCCeeeCccccc-----CCCCCCCHHHHHHHHHHHhcCC
Confidence 99999999998 599999999987 899999 999999999998874
No 30
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.4e-40 Score=245.22 Aligned_cols=113 Identities=27% Similarity=0.487 Sum_probs=108.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCcc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (134)
+.+.+||++|+++|+++++.|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 22 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~----nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~H 97 (216)
T 2pwq_A 22 SKELLRLQKELKDIENENVQEIDAHIKDS----NFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWH 97 (216)
T ss_dssp CHHHHHHHHHHHHHHHSCTTTEEEEECSS----CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEcCC----ccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcC
Confidence 67899999999999999999999999875 99999999999999999999999999999999999999999999999
Q ss_pred CCCC-CCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 85 PNVY-PSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 85 PnV~-~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|||+ .+|+||+++|.+ +|+|++ |++||++|+++|.+|
T Consensus 98 PNI~~~~G~ICL~iL~~-----~WsP~~ti~~VL~sI~sLL~~P 136 (216)
T 2pwq_A 98 PNISSQTGAICLDVLKN-----EWSPALTIRTALLSIQALLSDP 136 (216)
T ss_dssp TTBCTTTCBBCCHHHHH-----HCCTTCCHHHHHHHHHHHHHSC
T ss_pred CCCcCCCCEEEchhhcc-----cCCCCCcHHHHHHHHHHHHhCC
Confidence 9998 599999999987 799999 999999999998774
No 31
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=5.5e-40 Score=238.48 Aligned_cols=113 Identities=28% Similarity=0.511 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHHHcCC-------------CCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCC
Q 032754 5 GIARGRLTEERKAWRKNHP-------------HGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPS 71 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~-------------~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~ 71 (134)
..+.+||++|+++|+++++ .|+.+.+.++ |+++|+++|.||++|||+||.|+++|.||++||+
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~----nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~ 106 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGG----DIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPY 106 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------CEEEEEETT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCC----CcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCC
Confidence 3578999999999999887 7999998875 9999999999999999999999999999999999
Q ss_pred CCCeeeecCCCccCCCC-CCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 72 KPPKCKFPQGFFHPNVY-PSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 72 ~pP~v~f~t~i~HPnV~-~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
+||+|+|.|+||||||+ .+|+||+++|.+ +|+|++ |++||++|+++|.++
T Consensus 107 ~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~-----~WsP~~ti~~vL~sI~sll~~p 158 (193)
T 2f4z_A 107 NPPKMKFVTKIWHPNISSQTGAICLDILKH-----EWSPALTIRTALLSIQAMLADP 158 (193)
T ss_dssp SCCEEEESSCCCBTTBCTTTCBBCCGGGTT-----TCCTTSCHHHHHHHHHHHHHSC
T ss_pred CCCeEEEecCCccCCCcCCCCEEECccccc-----cCCCCCCHHHHHHHHHHHHhCC
Confidence 99999999999999998 699999999987 799999 999999999998774
No 32
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=1.1e-39 Score=232.32 Aligned_cols=118 Identities=19% Similarity=0.321 Sum_probs=107.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCcc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (134)
+.+.+||++|+++|+++++.|+++.+.+++ |++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 13 s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~---~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 88 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEANLPCTCKVHFPDPN---KLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWH 88 (167)
T ss_dssp CHHHHHHHHHHHHHGGGSCTTEEEECSSSS---CTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCC---cceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCccc
Confidence 568999999999999999999999876543 899999999 8999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeccCCCCC-CCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 85 PNVYPSGTVCLSILNEDN-VSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 85 PnV~~~G~vcl~~l~~~~-~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|||+.+|+||+++|..+. .+++|+|++ |++||++|+++|.++
T Consensus 89 Pnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~ 132 (167)
T 3fn1_B 89 PNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDL 132 (167)
T ss_dssp SSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTT
T ss_pred CCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCC
Confidence 999999999999998631 123699999 999999999999884
No 33
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=5.5e-40 Score=227.39 Aligned_cols=118 Identities=22% Similarity=0.312 Sum_probs=103.1
Q ss_pred CCcchHHHHHHHHHHHHHHHc-CCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeec
Q 032754 1 MSGGGIARGRLTEERKAWRKN-HPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFP 79 (134)
Q Consensus 1 Ms~~~~~~kRl~~El~~l~~~-~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~ 79 (134)
||. ..+.+||++|+++|+++ ++.|+++.+.+++ +.|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 2 m~~-~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~-d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 79 (138)
T 1jat_B 2 MSK-VPRNFRLLEELEKGEKGFGPESCSYGLADSD-DITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFI 79 (138)
T ss_dssp -CC-CCHHHHHHHHHHHHHC----CCEEEEESSTT-CTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred cch-HHHHHHHHHHHHHHHhcCCCCCEEEEeCCCC-CCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEE
Confidence 663 56789999999999998 7889999886431 12599999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCC-Cce--eeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 80 QGFFHPNVYPS-GTV--CLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 80 t~i~HPnV~~~-G~v--cl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|+||||||+.+ |+| |+++|. +|+|++ |++||++|+++|.++
T Consensus 80 t~i~HPnv~~~~G~i~~cL~~l~------~W~p~~~i~~vl~~i~~ll~~p 124 (138)
T 1jat_B 80 SKINLPCVNPTTGEVQTDFHTLR------DWKRAYTMETLLLDLRKEMATP 124 (138)
T ss_dssp BCCCCTTBCTTTCBBCTTSHHHH------TCCTTCCHHHHHHHHHHHHTSH
T ss_pred cccccCCEeCCCCEEeeecccCC------CCCCcCcHHHHHHHHHHHHcCC
Confidence 99999999886 999 999886 499999 999999999998873
No 34
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1.5e-40 Score=244.94 Aligned_cols=113 Identities=25% Similarity=0.424 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCccC
Q 032754 6 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHP 85 (134)
Q Consensus 6 ~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 85 (134)
.+.+||++|+++|++++++|+++.+.+++ ++++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~---~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HP 78 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSES---DIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHP 78 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSS---SCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCS
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCc---cccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccC
Confidence 47899999999999999999999987753 677999999999999999999999999999999999999999999999
Q ss_pred CCCC-CCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 86 NVYP-SGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 86 nV~~-~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
||+. +|+||+++|.+ +|+|++ |++||++|+++|.+|
T Consensus 79 NI~~~~G~ICL~iL~~-----~WsP~~ti~~VL~sI~sLL~~P 116 (215)
T 1tte_A 79 NISSVTGAICLDILRN-----AWSPVITLKSALISLQALLQSP 116 (215)
T ss_dssp SSCSSSSCCCSSTTTC-----CSCTTCCHHHHHHHHHHHHTSC
T ss_pred cCcCCCCEEECccCCC-----CCCCcCcHHHHHHHHHHHHhCC
Confidence 9998 99999999987 899999 999999999998874
No 35
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=1.1e-39 Score=229.75 Aligned_cols=111 Identities=24% Similarity=0.483 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEE-eecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCcc
Q 032754 6 IARGRLTEERKAWRKNHPHGFVA-KPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (134)
Q Consensus 6 ~~~kRl~~El~~l~~~~~~~~~~-~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (134)
.+.+||++|+++|+++++.|+.+ .+.++ |+++|+++|. |++|+|+||.|+++|.||++||++||+|+|.|++||
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~----~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDA----NVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYH 78 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSS----CTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCC----chheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCcc
Confidence 37899999999999999999999 55554 9999999999 999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeccC-CCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 85 PNVYPSGTVCLSIL-NEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 85 PnV~~~G~vcl~~l-~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|||+.+|+||+++| .+ +|+|++ |++||++|+++|.++
T Consensus 79 PnV~~~G~iCl~iL~~~-----~W~p~~~i~~vl~~i~~ll~~p 117 (155)
T 1wzv_A 79 PNVDENGQICLPIISSE-----NWKPCTKTCQVLEALNVLVNRP 117 (155)
T ss_dssp TTBCTTCBCCCGGGCTT-----TCCTTCCHHHHHHHHHHHHHSC
T ss_pred CcCCCCCeEeecCCCcc-----CCCCCCcHHHHHHHHHHHHhCC
Confidence 99999999999999 55 799999 999999999998764
No 36
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=2.6e-39 Score=231.40 Aligned_cols=117 Identities=27% Similarity=0.413 Sum_probs=103.7
Q ss_pred CCcchHHHHHHHHHHHHHHH-c-C------CC---CeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCC
Q 032754 1 MSGGGIARGRLTEERKAWRK-N-H------PH---GFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDY 69 (134)
Q Consensus 1 Ms~~~~~~kRl~~El~~l~~-~-~------~~---~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~Y 69 (134)
|| +.+.+||++|+++|++ + + +. ++.+.+.+++ |+++|+++|.||++|||+||.|+++|.||++|
T Consensus 3 Ms--~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~---nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~Y 77 (172)
T 2y9m_A 3 MA--DTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDET---DLSKWEAIISGPSDTPYENHQFRILIEVPSSY 77 (172)
T ss_dssp -C--HHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTT---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTT
T ss_pred Cc--HHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCC---chhEEEEEEECCCCCcccCCEEEEEEECCCcC
Confidence 77 8899999999999998 5 3 33 4566773332 99999999999999999999999999999999
Q ss_pred CCCCCeeeecC-CCccCCC-CCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 70 PSKPPKCKFPQ-GFFHPNV-YPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 70 P~~pP~v~f~t-~i~HPnV-~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|++||+|+|.| +|||||| +.+|+||+++|..+ +|+|++ |++||++|+++|.++
T Consensus 78 P~~PP~v~f~t~~i~HPni~~~~G~iCl~iL~~~----~W~p~~~i~~vL~si~~ll~~p 133 (172)
T 2y9m_A 78 PMNPPKISFMQNNILHCNVKSATGEICLNILKPE----EWTPVWDLLHCVHAVWRLLREP 133 (172)
T ss_dssp TTSCCEEEECTTSCCCTTEETTTTEECCGGGSTT----TCCTTCCHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeeCCeecCCCcCCCCEEeccccCCC----CCCCcCcHHHHHHHHHHHHhCC
Confidence 99999999999 9999999 68999999999832 799999 999999999998764
No 37
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=6.1e-40 Score=234.10 Aligned_cols=116 Identities=20% Similarity=0.220 Sum_probs=104.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCC-eEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCc
Q 032754 5 GIARGRLTEERKAWRKNHPHG-FVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF 83 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~-~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (134)
..+.+||++|+++|++++++| +++.+.+++ +.|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||
T Consensus 34 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~-d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 112 (170)
T 2hlw_A 34 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDE-DMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 112 (170)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGCEEEEESSTT-CSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEecCcc-cccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccc
Confidence 458899999999999999888 667764432 124999999999999999999999999999999999999999999999
Q ss_pred cCCCC-CCCceeeccCC--CCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 84 HPNVY-PSGTVCLSILN--EDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 84 HPnV~-~~G~vcl~~l~--~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
||||+ .+|+||+++|. + +|+|++ |++||++|+++|.++
T Consensus 113 HPNV~~~~G~ICl~iL~~~~-----~WsP~~ti~~vL~sI~~ll~~~ 154 (170)
T 2hlw_A 113 MNGVNSSNGVVDPRAISVLA-----KWQNSYSIKVVLQELRRLMMSK 154 (170)
T ss_dssp CSSBCSSSCBBCTTTCHHHH-----TCCSSCCHHHHHHHHHHHHHST
T ss_pred cCCEeCCCCEEEhhhcCCCC-----CCCccCcHHHHHHHHHHHHccC
Confidence 99998 79999999997 5 799999 999999999999863
No 38
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=3.1e-39 Score=242.81 Aligned_cols=115 Identities=26% Similarity=0.448 Sum_probs=108.2
Q ss_pred CCcchHHHHHHHHHHHHHHHc---CCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeee
Q 032754 1 MSGGGIARGRLTEERKAWRKN---HPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCK 77 (134)
Q Consensus 1 Ms~~~~~~kRl~~El~~l~~~---~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~ 77 (134)
|| +.|.+||++|+++|+++ ++.|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+
T Consensus 54 Ms--~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~d----nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~ 127 (253)
T 3e46_A 54 MA--NIAVQRIKREFKEVLKSEETSKNQIKVDLVDE----NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVR 127 (253)
T ss_dssp CC--HHHHHHHHHHHHHHHHCHHHHTTSEEEEECST----TSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEE
T ss_pred cc--HHHHHHHHHHHHHHHhCCCCCCCCEEEEECCC----cccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeee
Confidence 56 78999999999999987 478999999876 9999999999999999999999999999999999999999
Q ss_pred ecCCCccCCCC-CCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 78 FPQGFFHPNVY-PSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 78 f~t~i~HPnV~-~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|.|+||||||+ .+|+||+++|.+ +|+|++ |++||++|+++|.++
T Consensus 128 F~T~i~HPNV~~~~G~ICL~iL~~-----~WsP~~ti~~vL~sI~~ll~~p 173 (253)
T 3e46_A 128 FITKIWHPNISSVTGAICLDILKD-----QWAAAMTLRTVLLSLQALLAAA 173 (253)
T ss_dssp ESSCCCBTTBCTTTCBBCCGGGTT-----CCCTTCCHHHHHHHHHHHHHSC
T ss_pred ecCCCccCCccCCCCeeecccccC-----CCCCCCCHHHHHHHHHHHhcCC
Confidence 99999999998 599999999987 899999 999999999998774
No 39
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=3.1e-39 Score=227.62 Aligned_cols=116 Identities=28% Similarity=0.387 Sum_probs=105.6
Q ss_pred hHHHHHHHHHHHHHHHc-CCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCc
Q 032754 5 GIARGRLTEERKAWRKN-HPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF 83 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~-~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (134)
..+.+||++|+++|+++ ++.|+++.+.+++ +.|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~-d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~ 98 (156)
T 2q0v_A 20 VPRSFRLLDELERGQKGNVSEGVSFGLESAD-DITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIE 98 (156)
T ss_dssp CCHHHHHHHHHHHHHCC-CCTTEEEEESSTT-CTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCCeEEEECCCc-cccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccc
Confidence 46889999999999998 7889999886431 126999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCce---eeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCCc
Q 032754 84 HPNVYPSGTV---CLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISSL 127 (134)
Q Consensus 84 HPnV~~~G~v---cl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~~ 127 (134)
||||+.+|+| |+++|.+ |+|++ |++||++|+++|.++-
T Consensus 99 HPNV~~~G~icisCL~iL~~------WsP~~ti~~vL~sI~~ll~~Pn 140 (156)
T 2q0v_A 99 MSCVDNCGRVIKNNLHILKN------WNRNYTIETILISLRQEMLSSA 140 (156)
T ss_dssp CTTBCTTSBBCGGGSHHHHT------CCTTCCHHHHHHHHHHHTTSTT
T ss_pred cCCCccCCeEehhhcccccC------CCCcCcHHHHHHHHHHHHhCCC
Confidence 9999999999 8888874 99999 9999999999987753
No 40
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.7e-39 Score=228.17 Aligned_cols=111 Identities=25% Similarity=0.457 Sum_probs=103.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEe-ecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAK-PETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF 83 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~-~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (134)
+.+.+||++|+++| ++++|+++. +.++ |+++|+++| ||++|+|+||.|+++|.||++||++||+|+|.|++|
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~----~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 77 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPD----DLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVY 77 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTT----CTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCC----ccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCc
Confidence 56899999999999 678899988 4544 999999998 999999999999999999999999999999999999
Q ss_pred cCCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCCc
Q 032754 84 HPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISSL 127 (134)
Q Consensus 84 HPnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~~ 127 (134)
||||+.+|+||+++|.+ +|+|++ |++||++|+++|.+|-
T Consensus 78 HPnv~~~G~iCl~iL~~-----~W~p~~~i~~vL~~i~~ll~~Pn 117 (160)
T 1y8x_A 78 HPNIDLEGNVCLNILRE-----DWKPVLTINSIIYGLQYLFLEPN 117 (160)
T ss_dssp BTTBCTTCBBCCGGGTT-----TCCTTCCHHHHHHHHHHHHHSCC
T ss_pred cCcCCCCCeEEcccchh-----hccCCCCHHHHHHHHHHHHhCCC
Confidence 99999999999999987 799999 9999999999987743
No 41
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=2.3e-39 Score=227.93 Aligned_cols=112 Identities=26% Similarity=0.471 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCccCC
Q 032754 7 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPN 86 (134)
Q Consensus 7 ~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 86 (134)
|.+||++|+++|+++++.|+.+.+.+++ |+++|+++|. |++|+|+||.|+++|.||++||++||+|+|.|++||||
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~---~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEA---NLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPN 78 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCS---SSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCC---chheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCcccc
Confidence 6799999999999999999987654443 9999999998 99999999999999999999999999999999999999
Q ss_pred CCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 87 VYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 87 V~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|+.+|+||+++|..+ +|+|++ |++||++|+++|..+
T Consensus 79 v~~~G~iCl~iL~~~----~W~p~~~i~~vl~~i~~ll~~p 115 (154)
T 1c4z_D 79 IDEKGQVCLPVISAE----NWKPATKTDQVIQSLIALVNDP 115 (154)
T ss_dssp BCTTCBBCCTTTSSS----SCCTTCCHHHHHHHHHHHHHSC
T ss_pred CCCCCEEECCCCCCC----CCCCCCcHHHHHHHHHHHHcCC
Confidence 999999999999732 799999 999999999998764
No 42
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.8e-39 Score=230.63 Aligned_cols=111 Identities=24% Similarity=0.424 Sum_probs=103.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEe-ecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAK-PETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFF 83 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~-~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 83 (134)
+.+.+||++|+++| ++++|+++. +.++ |+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|+||
T Consensus 25 ~~~~~RL~kEl~~l--~~~~~i~~~~p~~~----nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~ 97 (180)
T 2nvu_C 25 SAAQLRIQKDINEL--NLPKTCDISFSDPD----DLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVY 97 (180)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTT----CTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEecccc----cccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCc
Confidence 67899999999999 678899998 4544 999999999 999999999999999999999999999999999999
Q ss_pred cCCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCCc
Q 032754 84 HPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISSL 127 (134)
Q Consensus 84 HPnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~~ 127 (134)
||||+.+|+||+++|.+ +|+|++ |++||++|+++|.+|-
T Consensus 98 HPNV~~~G~iCl~iL~~-----~W~p~~~i~~vL~si~~ll~~Pn 137 (180)
T 2nvu_C 98 HPNIDLEGNVALNILRE-----DWKPVLTINSIIYGLQYLFLEPN 137 (180)
T ss_dssp BTTBCTTSBBCCGGGTT-----SCCTTCCHHHHHHHHHHHHHSCC
T ss_pred cCCCCCCCcEEcccccc-----cCCCCCCHHHHHHHHHHHHhCCC
Confidence 99999999999999987 799999 9999999999987743
No 43
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=6.7e-39 Score=228.30 Aligned_cols=113 Identities=19% Similarity=0.334 Sum_probs=103.9
Q ss_pred CCcchHHHHHHHHHHHHHHHcC------------CCCeEEeecCCCCCCCcceEEEEEcCCCCCCCC--CCEEEEEEEcC
Q 032754 1 MSGGGIARGRLTEERKAWRKNH------------PHGFVAKPETKDGSVNLMIWECIIPGKTGTDWE--GGYFPLTLYFS 66 (134)
Q Consensus 1 Ms~~~~~~kRl~~El~~l~~~~------------~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~--gg~f~~~i~fp 66 (134)
|| +.+.|||++|+++|++++ +.++.+.+.++ |+++|+++|.||++|+|+ ||.|+++|.||
T Consensus 5 Ms--~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~----nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp 78 (167)
T 4ds2_A 5 MK--NISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTD----TIYNWILKVKAPADSVYGGAGNTYQLSVLFS 78 (167)
T ss_dssp CC--CCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEES----STTEEEEEEECCTTSGGGTTCCEEEEEEECC
T ss_pred cc--HHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCC----cccEEEEEEECCCCCCccCCCCEEEEEEECC
Confidence 77 788999999999999987 77889888776 999999999999999999 99999999999
Q ss_pred CCCCCCCCeeeecCCCccCCCCCCCceeeccCCCCCCCCCCChHH-HHHHHH-HHHHhhC
Q 032754 67 EDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMY-GSGLAKI 124 (134)
Q Consensus 67 ~~YP~~pP~v~f~t~i~HPnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~-~i~~~l~ 124 (134)
++||++||+|+|.|++|||||+.+|+||+++|.+ +|+|++ ++++|+ .|++++.
T Consensus 79 ~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~~-----~W~p~~~i~~vll~~l~~l~~ 133 (167)
T 4ds2_A 79 DDYPHEPPTVRFVTPVYSPLVTGEGGICDRMVND-----FWTPDQHASDVIKLVLDRVFS 133 (167)
T ss_dssp TTTTTSCCEEEESSCCCCSSCCTTSCCCTHHHHT-----TCCTTSCHHHHHHHHHHHHHT
T ss_pred CCCCCCCCEEEEeCCcccccCCCCCEEEcccCcC-----CCCCCCChHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999987 899999 999765 4555554
No 44
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=230.99 Aligned_cols=113 Identities=24% Similarity=0.364 Sum_probs=101.5
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecC
Q 032754 1 MSGGGIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (134)
Q Consensus 1 Ms~~~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (134)
||+.+.+.+||++|+++|++ .|+++.+. + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 20 ms~~~~a~~RL~kEl~~l~~---~g~~v~~~-d----dl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t 91 (179)
T 2z5d_A 20 MSSPSPGKRRMDTDVIKLIE---SKHEVTIL-G----GLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMN 91 (179)
T ss_dssp ---CCHHHHHHHHHHHHHHH---SSSCEEEE-E----ETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CCCchHHHHHHHHHHHhcCc---CCCEEEEC-C----CCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEec
Confidence 55334689999999999985 47888776 3 7899999999999999999999999999999999999999999
Q ss_pred CCccCCCCC-CCceeeccCCCCCCCCCCChHH-HHHHHHH-HHHhhCCC
Q 032754 81 GFFHPNVYP-SGTVCLSILNEDNVSSSCRFVI-YFQIMYG-SGLAKISS 126 (134)
Q Consensus 81 ~i~HPnV~~-~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~-i~~~l~~~ 126 (134)
+||||||+. +|+||+++|.+ +|+|++ |++||++ |+++|..|
T Consensus 92 ~i~HPNV~~~~G~ICL~iL~~-----~WsP~~ti~~iL~s~I~~Ll~~P 135 (179)
T 2z5d_A 92 KIFHPNIDEASGTVCLDVINQ-----TWTALYDLTNIFESFLPQLLAYP 135 (179)
T ss_dssp CCCBTTBCTTTCBBCHHHHHH-----HCCTTCCTTHHHHTHHHHHHHSC
T ss_pred CCccCcCCCCCCeEecccccc-----CCCCCCCHHHHHHHHHHHHHhCC
Confidence 999999998 99999999986 799999 9999999 99988764
No 45
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=5.4e-39 Score=225.64 Aligned_cols=109 Identities=21% Similarity=0.378 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCccC
Q 032754 6 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHP 85 (134)
Q Consensus 6 ~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 85 (134)
.|.+||++|+++|+++ |+.+.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~~~----~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 74 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELNNG----STQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHP 74 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEETT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEccC----ccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccC
Confidence 4679999999999875 678888765 999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCceeeccCCCCCCCCCCChHH-HHHHHHH-HHHhhCCC
Q 032754 86 NVY-PSGTVCLSILNEDNVSSSCRFVI-YFQIMYG-SGLAKISS 126 (134)
Q Consensus 86 nV~-~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~-i~~~l~~~ 126 (134)
||+ .+|+||+++|.+ +|+|++ |++||++ |+++|..|
T Consensus 75 ni~~~~G~iCl~il~~-----~W~p~~~i~~vl~~ii~~Ll~~P 113 (152)
T 2onu_A 75 NVDEASGSVCLDVINQ-----TWTPLYSLVNVFEVFLPQLLTYP 113 (152)
T ss_dssp TBCTTTCBBCHHHHHH-----HCCTTCCHHHHHHTHHHHHHHSC
T ss_pred cCcCcCCeEecccccc-----cCCCCCCHHHHHHHHHHHHHhCC
Confidence 998 599999999987 799999 9999999 57777653
No 46
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=1.2e-38 Score=230.33 Aligned_cols=117 Identities=14% Similarity=0.259 Sum_probs=108.2
Q ss_pred hHHHHHHHHHHHHHHHcC---CCCeEEeecCCCCCCCcceEEEEEcCC-CCCCCCC-----------CEEEEEEEcCCCC
Q 032754 5 GIARGRLTEERKAWRKNH---PHGFVAKPETKDGSVNLMIWECIIPGK-TGTDWEG-----------GYFPLTLYFSEDY 69 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~---~~~~~~~~~~~~~~~~~~~w~~~i~gp-~~t~y~g-----------g~f~~~i~fp~~Y 69 (134)
..+.+||++|+++|++++ +.++++.+.++ |+++|+++|.|| ++|+|+| |.|+++|.||++|
T Consensus 26 ~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~d----nl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~Y 101 (186)
T 1zuo_A 26 VQASDRLMKELRDIYRSQSYKTGIYSVELIND----SLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNF 101 (186)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHTTSEEEEEETT----EEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTT
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCC----ccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCC
Confidence 789999999999999988 68899988875 999999999998 8999998 8999999999999
Q ss_pred CCCCCeeeecCCCccC-CCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCCcch
Q 032754 70 PSKPPKCKFPQGFFHP-NVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISSLDD 129 (134)
Q Consensus 70 P~~pP~v~f~t~i~HP-nV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~~~d 129 (134)
|++||+|+|.|++||| ||+.+|+||+++|..+ +|+|++ |++||++|+++|.+++.+
T Consensus 102 P~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~----~WsP~~ti~~VL~sI~slL~~p~a~ 159 (186)
T 1zuo_A 102 PFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQ----GWSSAYSIESVIMQINATLVKGKAR 159 (186)
T ss_dssp TSSCCEEEEEESCEESTTBCGGGBBCCGGGSTT----TCCTTSCHHHHHHHHHHHHHHTTCE
T ss_pred CCCCCeEEEeCCccCCCccCCCCcEEeccCCCC----CCCCcCcHHHHHHHHHHHHcCCChh
Confidence 9999999999999999 6999999999999743 799999 999999999999876543
No 47
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=2.2e-37 Score=246.02 Aligned_cols=113 Identities=27% Similarity=0.527 Sum_probs=108.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCcc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (134)
+.|.|||++|+++|++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~----nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 77 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGD----DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 77 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETT----EEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCC----cceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccc
Confidence 67899999999999999999999999876 99999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 85 PNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 85 PnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|||+.+|+||+++|.+ +|+|++ |++||++|+++|..|
T Consensus 78 Pnv~~~G~iCl~il~~-----~W~p~~~i~~vL~~i~~ll~~p 115 (399)
T 4ddg_A 78 PNINSNGSISLDILRS-----QWSPALTISKVLLSICSLLCDP 115 (399)
T ss_dssp TTBCTTCBBCCGGGTT-----SCCTTCCHHHHHHHHHHHHHSC
T ss_pred cccCCCCeEeCccccc-----CCCccccHHHHHHHHHHHHcCC
Confidence 9999999999999987 899999 999999999998874
No 48
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6e-37 Score=221.67 Aligned_cols=114 Identities=23% Similarity=0.356 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCcc
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFH 84 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 84 (134)
+.+.+||++|+++|++++++||.+.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ |
T Consensus 13 ~~a~~RL~kEl~~l~~~~~~~i~~~p~~~----nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~ 86 (187)
T 2f4w_A 13 TTATQRLKQDYLRIKKDPVPYICAEPLPS----NILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--N 86 (187)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTEEEEEETT----EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--C
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCC----ccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--C
Confidence 45889999999999999999999988865 99999999999999999999999999999999999999999999 9
Q ss_pred CCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 85 PNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 85 PnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|||+.+|+||+++|..+ .++|+|++ |.+||++|+++|..+
T Consensus 87 ~~~~~~G~ICL~iL~~~--~~~W~P~~ti~~vL~si~sll~~p 127 (187)
T 2f4w_A 87 GRFKCNTRLCLSITDFH--PDTWNPAWSVSTILTGLLSFMVEK 127 (187)
T ss_dssp SSBCTTSCBC------------CCTTCCHHHHHHHHHHHHHSC
T ss_pred ceeccCCeEeeeccccC--ccCCCCcCcHHHHHHHHHHHhcCC
Confidence 99999999999999521 01799999 999999999998764
No 49
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=4.4e-37 Score=222.85 Aligned_cols=110 Identities=27% Similarity=0.420 Sum_probs=102.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEe----ecCCCCCCCcc---eEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeee
Q 032754 5 GIARGRLTEERKAWRKNHPHGFVAK----PETKDGSVNLM---IWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCK 77 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~~~~----~~~~~~~~~~~---~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~ 77 (134)
+.|.+||++|+++|+ +++|+++. +.++ |++ +|+++|. |++|||+||.|+++|.||++||++||+|+
T Consensus 28 s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~----nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~ 100 (190)
T 3o2u_A 28 SAARIRLKRDLDSLD--LPPTVTLNVITSPDSA----DRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVV 100 (190)
T ss_dssp CHHHHHHHHHHHTCC--CCTTEEEEEEECTTCC----CTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEE
T ss_pred cHHHHHHHHHHHhcc--CCCCEEEEecCCCCCc----cCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeE
Confidence 678999999999998 77899987 4444 999 9999998 78899999999999999999999999999
Q ss_pred ecCCCccCCCCCCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhhCCC
Q 032754 78 FPQGFFHPNVYPSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAKISS 126 (134)
Q Consensus 78 f~t~i~HPnV~~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l~~~ 126 (134)
|.|+||||||+.+|+||+++|.+ +|+|++ |++||++|+++|.+|
T Consensus 101 f~t~i~HPnV~~~G~iCl~iL~~-----~W~p~~~i~~vL~~i~~ll~~p 145 (190)
T 3o2u_A 101 CLKKIFHPNIDLKGNVCLNILRE-----DWSPALDLQSIITGLLFLFLEP 145 (190)
T ss_dssp ECSCCCCTTBCTTSBBCCGGGTT-----TCCTTCCHHHHHHHHHHHHHSC
T ss_pred EecCcccCCCCCCCeEechhccC-----CCCCCCCHHHHHHHHHHHHhCC
Confidence 99999999999999999999987 899999 999999999998774
No 50
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=9.4e-38 Score=223.04 Aligned_cols=108 Identities=22% Similarity=0.293 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCccC
Q 032754 6 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHP 85 (134)
Q Consensus 6 ~~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 85 (134)
.+.+||++|+++|++++. ++ ..++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||||
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~----~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HP 83 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSD----TVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHP 83 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECS----STTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBT
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCC----CceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccc
Confidence 567999999999998873 33 2333 999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCceeeccCCCCCCCCCCChHH-HHHHHHHH-HHhhCCC
Q 032754 86 NVY-PSGTVCLSILNEDNVSSSCRFVI-YFQIMYGS-GLAKISS 126 (134)
Q Consensus 86 nV~-~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i-~~~l~~~ 126 (134)
||+ .+|+||+++|.+ +|+|++ |++||++| +++|..+
T Consensus 84 Ni~~~~G~iCl~iL~~-----~W~p~~~i~~vL~sil~~ll~~P 122 (171)
T 1yf9_A 84 NVDERSGSVCLDVINQ-----TWTPMYQLENIFDVFLPQLLRYP 122 (171)
T ss_dssp TBCTTTCBBCHHHHHH-----HCCTTCCTHHHHHTHHHHHHHSC
T ss_pred cCcccCCeEecccccc-----CCCCCCcHHHHHHHHHHHHHhCC
Confidence 999 599999999987 799999 99999998 6777653
No 51
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=5.4e-36 Score=231.16 Aligned_cols=116 Identities=28% Similarity=0.498 Sum_probs=104.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCe----EEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecC
Q 032754 5 GIARGRLTEERKAWRKNHPHGF----VAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (134)
Q Consensus 5 ~~~~kRl~~El~~l~~~~~~~~----~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (134)
+.+.+||++|+++|++++++|+ .+.+.++ |++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 75 ~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ed----nl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T 150 (323)
T 3ceg_A 75 AARARRLAQEAVTLSTSLPLSSSSSVFVRCDEE----RLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLET 150 (323)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESS----CTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECC
T ss_pred HHHHHHHHHHHHHHHhCCCCCcccceeecccCC----CccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEec
Confidence 6899999999999999988754 4455554 9999999999999999999999999999999999999999999
Q ss_pred C-----CccCCCCCCCceeeccCCCCCC--CCCCChHH--HHHHHHHHHHhhC
Q 032754 81 G-----FFHPNVYPSGTVCLSILNEDNV--SSSCRFVI--YFQIMYGSGLAKI 124 (134)
Q Consensus 81 ~-----i~HPnV~~~G~vcl~~l~~~~~--~~~W~p~~--i~~vl~~i~~~l~ 124 (134)
+ ||||||+.+|+||+++|..+.. .++|+|++ |++||++|+++|.
T Consensus 151 ~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~ 203 (323)
T 3ceg_A 151 TGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLIL 203 (323)
T ss_dssp STTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTS
T ss_pred cCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHc
Confidence 8 9999999999999999984321 12799997 9999999999986
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.95 E-value=8.2e-30 Score=178.92 Aligned_cols=96 Identities=21% Similarity=0.319 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCC----------EEEEEEEcCCCCCCCCCeee
Q 032754 8 RGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGG----------YFPLTLYFSEDYPSKPPKCK 77 (134)
Q Consensus 8 ~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg----------~f~~~i~fp~~YP~~pP~v~ 77 (134)
.+||++|+++|++. +.+..+ |++.|.+.+.||+||+|+|| .|+++|.||.+||++||+|+
T Consensus 34 ~~RL~eE~k~L~k~------v~p~k~----n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~ 103 (172)
T 2z6o_A 34 VQRLKEEYQSLIRY------VENNKN----ADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIA 103 (172)
T ss_dssp HHHHHHHHHHHHHH------HHHHHH----TTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCB
T ss_pred HHHHHHHHHHHHHH------hccCcc----ccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeee
Confidence 89999999999983 445444 89999999999999999999 99999999999999999999
Q ss_pred ecCC-CccCCCCCCCceeeccCCCC--CCCCCCChHH-HHHHH
Q 032754 78 FPQG-FFHPNVYPSGTVCLSILNED--NVSSSCRFVI-YFQIM 116 (134)
Q Consensus 78 f~t~-i~HPnV~~~G~vcl~~l~~~--~~~~~W~p~~-i~~vl 116 (134)
|.++ +||||||.+|+|||++|... . .|+|.+ |..+|
T Consensus 104 F~~~~~~hpnmY~~G~ICLdIL~kp~Ws---~~~P~~~IahiL 143 (172)
T 2z6o_A 104 VPELDGKTAKMYRGGKICLTDHFKPLWA---RNVPKFGLAHLM 143 (172)
T ss_dssp CGGGTTTCSSBCTTSBBCCCTTHHHHHH---HHTTSCCHHHHH
T ss_pred eCCCCCCCCCCCCCCcEechhhcccccc---ccCCccCHHHHH
Confidence 9998 99999999999999999441 1 355999 99987
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.79 E-value=3.1e-19 Score=125.81 Aligned_cols=112 Identities=15% Similarity=0.121 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHcCC---CCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCE---EEEEEEcCCCCCCCCCeeeecC-
Q 032754 8 RGRLTEERKAWRKNHP---HGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGY---FPLTLYFSEDYPSKPPKCKFPQ- 80 (134)
Q Consensus 8 ~kRl~~El~~l~~~~~---~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~---f~~~i~fp~~YP~~pP~v~f~t- 80 (134)
.+|..+|+.++.+.-+ +...+...++ ...++-+.+.|.-.++|+|+. |.+.|-||.+||++||.|.|.+
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~d----G~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~ 105 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHSD----GTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLE 105 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTT----SCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGG
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcCC----CChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECC
Confidence 3677788888876432 2222334443 556666777777778999998 8899999999999999998865
Q ss_pred ------C---Cc-cCCCCCCCceeeccCCCCCCCCCCCh-HH-HHHHHHHHHHhhCCCcch
Q 032754 81 ------G---FF-HPNVYPSGTVCLSILNEDNVSSSCRF-VI-YFQIMYGSGLAKISSLDD 129 (134)
Q Consensus 81 ------~---i~-HPnV~~~G~vcl~~l~~~~~~~~W~p-~~-i~~vl~~i~~~l~~~~~d 129 (134)
+ |+ ||||+.+|+||+++|. +|+| +. +.++|.+|+++|..|.-|
T Consensus 106 t~~m~~~~~~I~~hpnVD~~G~I~lpyL~------~W~p~~s~L~~ll~~l~~lf~ep~~d 160 (162)
T 3r3q_A 106 NFDMNTISSSLPIQEYIDSNGWIALPILH------AWDPAAMNLIMVVQELMSLLHEPPQD 160 (162)
T ss_dssp GCCTTTSCTTSTHHHHBCTTSBBCCGGGG------SCCGGGCCHHHHHHHHHHTTSCCCCC
T ss_pred CccccccccccCCCCCCCCCCcEeCcccc------cCCCCcCcHHHHHHHHHHHhcCCCCC
Confidence 1 77 9999999999999995 4999 56 999999999998887655
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.78 E-value=3.3e-20 Score=127.74 Aligned_cols=87 Identities=21% Similarity=0.361 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCC----------EEEEEEEcCCCCCCCCCee
Q 032754 7 ARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGG----------YFPLTLYFSEDYPSKPPKC 76 (134)
Q Consensus 7 ~~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg----------~f~~~i~fp~~YP~~pP~v 76 (134)
-..||..|++.|-+ ++....+ +-..|...+.||+||+|+|+ .|+++|+||.+||..||+|
T Consensus 35 w~~RlkeEy~alI~------yv~~nK~----~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI 104 (168)
T 3kpa_A 35 WTARLKEEYASLIT------YVEHNKA----SDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEI 104 (168)
T ss_dssp HHHHHHHHHHHHHH------HHHHHHH----TTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCC
T ss_pred HHHHHHHHHHHHHH------HHHhccc----ccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEe
Confidence 57899999999976 2222222 44569999999999999999 8999999999999999999
Q ss_pred eecCC-CccCCCCCCCceeeccCCCCCCCCCCChHH
Q 032754 77 KFPQG-FFHPNVYPSGTVCLSILNEDNVSSSCRFVI 111 (134)
Q Consensus 77 ~f~t~-i~HPnV~~~G~vcl~~l~~~~~~~~W~p~~ 111 (134)
+|.+. .+|||+|.+|+|||+++ |+|.+
T Consensus 105 ~Fp~ldgkt~kmYr~GkICLdIh--------wkPlW 132 (168)
T 3kpa_A 105 ALPELEGKTVKMYRGGKICMTTH--------FFPLW 132 (168)
T ss_dssp BCGGGTTTCSSEETTTEECCCTT--------HHHHH
T ss_pred ecccccCcCccccCCCcEEeccc--------cchhh
Confidence 99994 89999999999999873 77776
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.55 E-value=1.7e-14 Score=99.97 Aligned_cols=103 Identities=20% Similarity=0.266 Sum_probs=78.1
Q ss_pred HHHHHHHHHHcCCC-CeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEE--EEEcCCCCCCCCCeeeecCC------
Q 032754 11 LTEERKAWRKNHPH-GFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPL--TLYFSEDYPSKPPKCKFPQG------ 81 (134)
Q Consensus 11 l~~El~~l~~~~~~-~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~--~i~fp~~YP~~pP~v~f~t~------ 81 (134)
..+|+..+.++=+. ......-. ....++..|..+|. .+|+|+.|.+ .|-||.+||++||.| |.++
T Consensus 25 t~~dv~~vl~~yp~L~p~~~~y~-G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I 98 (146)
T 3obq_A 25 TVRETVNVITLYKDLKPVLDSYG-TGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTI 98 (146)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESS-STTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEE
T ss_pred hHHHHHHHHHhCCCCceEeeeee-CChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEE
Confidence 34577766654221 11121122 33458999999998 5899999985 889999999999999 6655
Q ss_pred CccCCCCCCCceeeccCCCCCCCCCCCh-HH-HHHHHHHHHHhhCC
Q 032754 82 FFHPNVYPSGTVCLSILNEDNVSSSCRF-VI-YFQIMYGSGLAKIS 125 (134)
Q Consensus 82 i~HPnV~~~G~vcl~~l~~~~~~~~W~p-~~-i~~vl~~i~~~l~~ 125 (134)
.+||||+.+|+||+..|.+ |++ .. +.+++..++.++..
T Consensus 99 ~~~~~Vd~~G~i~lpyL~~------W~~~~snL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 99 KTGKHVDANGKIYLPYLHE------WKHPQSDLLGLIQVMIVVFGD 138 (146)
T ss_dssp CCBTTBCTTCBBCCHHHHT------CCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCEecccccc------cCCCCCCHHHHHHHHHHHHhh
Confidence 5899999999999999964 988 55 99999999887654
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.27 E-value=0.043 Score=36.06 Aligned_cols=67 Identities=19% Similarity=0.265 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecC
Q 032754 8 RGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (134)
Q Consensus 8 ~kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (134)
..+...|+..|..==+..+.+ ..+ ....+.+.+..-.+..-+.-.+.+.|.+|++||..||.+...+
T Consensus 12 ~e~q~~EleaL~sIy~d~~~~--~~~----~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 12 GEEQRNELEALESIYPDSFTV--LSE----NPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHCSSSEEE--CCS----SSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHHccCceEE--ccC----CCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 456677888887533333432 221 3456666666322222233478899999999999999998754
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=95.16 E-value=0.21 Score=32.63 Aligned_cols=70 Identities=14% Similarity=0.083 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCC--CCCEEEEEEEcCCCCCCCCCeeeecC
Q 032754 9 GRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDW--EGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (134)
Q Consensus 9 kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y--~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (134)
.+...|+..|..==+..+....... ..+...+.+.+..+.+..- ..-.+.+.|.+|++||..+|.|...+
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~~~--~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKGNG--RTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECCTT--SSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecCCC--CCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 3567788877753333444322111 0134556666753322111 12478899999999999999998775
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=95.03 E-value=0.26 Score=32.63 Aligned_cols=41 Identities=17% Similarity=0.306 Sum_probs=29.7
Q ss_pred cceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecC
Q 032754 39 LMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (134)
Q Consensus 39 ~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (134)
...+.+.+....+ .-..-.+.+.|.+|.+||..||.|.+.+
T Consensus 45 ~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 45 QIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred CcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 4567777774322 1123478899999999999999998865
No 59
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.60 E-value=0.11 Score=34.13 Aligned_cols=68 Identities=12% Similarity=0.080 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHc-CC-CCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecC
Q 032754 9 GRLTEERKAWRKN-HP-HGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (134)
Q Consensus 9 kRl~~El~~l~~~-~~-~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (134)
.+...|+..|..= .. ..+.+.-... .+...+.+.+.... ..-..-.+.+.|.+|.+||..||.|...+
T Consensus 10 e~q~~EleaL~SIy~d~~e~~~~~~~~---~~~~~f~i~l~~~~-~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 10 EPVQEELSVLAAIFCRPHEWEVLSRSE---TDGTVFRIHTKAEG-FMDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHHCCTTTCCCSEECS---SSCEEEEEEEECCT-TTTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCceEEecCCC---CCCCeEEEEecCCC-CCCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 3456677777642 11 1222211111 13457777776332 11112478899999999999999987653
No 60
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=94.21 E-value=0.25 Score=35.02 Aligned_cols=82 Identities=17% Similarity=0.125 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHcCCCCeEEeecCCCCCCCcceEEEEEcCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeecCCCccCCCC
Q 032754 9 GRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSKPPKCKFPQGFFHPNVY 88 (134)
Q Consensus 9 kRl~~El~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~ 88 (134)
++|.+|+.++-=+. -+.. +. ++...++.+... .|....++|.++.+||.++|.+..--+. |.
T Consensus 4 ~~li~Ei~~iGW~~----l~~i-d~----~~~~i~l~~~D~-----~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~-- 65 (186)
T 3zqs_A 4 SSLIEEIGTLGWDK----LVYA-DT----CFSTIKLKAEDA-----SGREHLITLKLKAKYPAESPDYFVDFPV--PF-- 65 (186)
T ss_dssp CSHHHHHHHHCGGG----EEEE-CT----TSSEEEEEEECT-----TSCEEEEEEECCTTTTTSCCEEECCCSS--CC--
T ss_pred HHHHHHHHHhCCce----eeee-cC----CccEEEEEEEeC-----CCCeEEEEEEECCCCCCCCCeeEEcCCC--Cc--
Confidence 36788888872221 1222 22 788888888733 3778899999999999999987654432 11
Q ss_pred CCCceeeccCCCCCCCCCCChHH-HHHHHHHHHHhh
Q 032754 89 PSGTVCLSILNEDNVSSSCRFVI-YFQIMYGSGLAK 123 (134)
Q Consensus 89 ~~G~vcl~~l~~~~~~~~W~p~~-i~~vl~~i~~~l 123 (134)
. . .|+|.. +..++.+.+.++
T Consensus 66 -----~-----~-----~w~~~ssL~~v~~qF~~~L 86 (186)
T 3zqs_A 66 -----C-----A-----SWTPQSSLISIYSQFLAAI 86 (186)
T ss_dssp -----C-----C-----CCCTTCCHHHHHHHHHHHH
T ss_pred -----c-----c-----ccCCCccHHHHHHHHHHHH
Confidence 1 1 588888 888887776554
No 61
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=92.23 E-value=0.8 Score=31.06 Aligned_cols=23 Identities=13% Similarity=0.077 Sum_probs=21.1
Q ss_pred EEEEEEEcCCCCCCCCCeeeecC
Q 032754 58 YFPLTLYFSEDYPSKPPKCKFPQ 80 (134)
Q Consensus 58 ~f~~~i~fp~~YP~~pP~v~f~t 80 (134)
.+.+.|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 78999999999999999998766
No 62
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=91.79 E-value=0.1 Score=34.54 Aligned_cols=72 Identities=14% Similarity=0.084 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHcCCCCeEEeecCCCC-CCCcceEEEEEcCCCC-C-CCCCCEEEEEEEcCCCCCCCCCeeeecC
Q 032754 8 RGRLTEERKAWRKNHPHGFVAKPETKDG-SVNLMIWECIIPGKTG-T-DWEGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (134)
Q Consensus 8 ~kRl~~El~~l~~~~~~~~~~~~~~~~~-~~~~~~w~~~i~gp~~-t-~y~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (134)
..+...|+..|..==+..+......... ......+.+.+. +.+ . .-..-.+.+.|.||++||..+|.|...+
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 12 SQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 4456677777765323333321110000 001345667776 222 1 0012468899999999999999998743
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=90.74 E-value=0.2 Score=33.91 Aligned_cols=24 Identities=21% Similarity=0.348 Sum_probs=21.1
Q ss_pred EEEEEEEcCCCCCCCCCeeeecCC
Q 032754 58 YFPLTLYFSEDYPSKPPKCKFPQG 81 (134)
Q Consensus 58 ~f~~~i~fp~~YP~~pP~v~f~t~ 81 (134)
.+.+.|.+|.+||..||.|.....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 688999999999999999987763
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=71.64 E-value=2.6 Score=19.39 Aligned_cols=21 Identities=33% Similarity=0.347 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCe
Q 032754 6 IARGRLTEERKAWRKNHPHGF 26 (134)
Q Consensus 6 ~~~kRl~~El~~l~~~~~~~~ 26 (134)
.-..||.-|+..++.++|.|.
T Consensus 5 seldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHHhhhccCCCCCC
Confidence 356899999999999988764
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=38.78 E-value=28 Score=24.75 Aligned_cols=25 Identities=12% Similarity=0.343 Sum_probs=21.6
Q ss_pred CCCEEEEEEEcCCCCCC-----CCCeeeec
Q 032754 55 EGGYFPLTLYFSEDYPS-----KPPKCKFP 79 (134)
Q Consensus 55 ~gg~f~~~i~fp~~YP~-----~pP~v~f~ 79 (134)
+.|.|.|+=.+|--||. +||.|.|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 46889999999999998 78888776
No 66
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=37.29 E-value=15 Score=22.53 Aligned_cols=12 Identities=17% Similarity=0.194 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHH
Q 032754 7 ARGRLTEERKAW 18 (134)
Q Consensus 7 ~~kRl~~El~~l 18 (134)
.+||||+||+-|
T Consensus 63 QLKRvQRdlrGL 74 (87)
T 2rf4_B 63 QLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHhhcCC
Confidence 569999998865
No 67
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=35.87 E-value=15 Score=24.47 Aligned_cols=31 Identities=23% Similarity=0.381 Sum_probs=25.3
Q ss_pred CCCCeeeec---CCCccCCCCCCCceeeccCCCC
Q 032754 71 SKPPKCKFP---QGFFHPNVYPSGTVCLSILNED 101 (134)
Q Consensus 71 ~~pP~v~f~---t~i~HPnV~~~G~vcl~~l~~~ 101 (134)
..||.|.+. +.--|++|.++|..|+++|..+
T Consensus 42 ~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 75 (157)
T 3pft_A 42 LEPPLVAFAVQNSSTTWPKLKDLPSLGISVLGEA 75 (157)
T ss_dssp TTTTEEEEEEETTCSSHHHHTTSSCEEEEECBTT
T ss_pred CCCcEEEEEECCCCchHHHHHhCCEEEEEECCHH
Confidence 358887775 4567999999999999999874
No 68
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=35.58 E-value=28 Score=18.02 Aligned_cols=14 Identities=21% Similarity=0.176 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHH
Q 032754 6 IARGRLTEERKAWR 19 (134)
Q Consensus 6 ~~~kRl~~El~~l~ 19 (134)
..+|||..|++++.
T Consensus 28 ~~~~~~~~~~~~~~ 41 (42)
T 3g9r_A 28 SKIKRIENEIKRIK 41 (42)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 46799999999875
No 69
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=32.14 E-value=19 Score=16.42 Aligned_cols=17 Identities=29% Similarity=0.608 Sum_probs=9.5
Q ss_pred CCCCCeeeecCCCccCC
Q 032754 70 PSKPPKCKFPQGFFHPN 86 (134)
Q Consensus 70 P~~pP~v~f~t~i~HPn 86 (134)
|+.-|.-.|..+-|||-
T Consensus 4 pmtlpenyfserpyhpp 20 (26)
T 2jrw_A 4 PMTLPENYFSERPYHPP 20 (26)
T ss_dssp CCCCSSSSCCSSSCCSC
T ss_pred ccccchhhcccCCCCCC
Confidence 33444445666667764
No 70
>3kxt_A Chromatin protein CREN7; protein-DNA complex, crenarchaea chromatin protein, minor-GR binding, methylation; 1.60A {Sulfolobus solfataricus} PDB: 2jtm_A 3lwh_A* 3lwi_A*
Probab=27.56 E-value=71 Score=17.75 Aligned_cols=11 Identities=27% Similarity=0.643 Sum_probs=8.7
Q ss_pred EEEEcCCCCCC
Q 032754 61 LTLYFSEDYPS 71 (134)
Q Consensus 61 ~~i~fp~~YP~ 71 (134)
|+-.+|++||.
T Consensus 46 fR~k~pddy~~ 56 (56)
T 3kxt_A 46 FRHKLPDDYPI 56 (56)
T ss_dssp EEEECCTTCCC
T ss_pred eeeeCcCcCCC
Confidence 46788999984
No 71
>2e6i_A Tyrosine-protein kinase ITK/TSK; BTK, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.38 E-value=26 Score=20.19 Aligned_cols=18 Identities=39% Similarity=0.720 Sum_probs=13.1
Q ss_pred CCccCCCCCCCc-eeeccC
Q 032754 81 GFFHPNVYPSGT-VCLSIL 98 (134)
Q Consensus 81 ~i~HPnV~~~G~-vcl~~l 98 (134)
..|||.++.+|+ .|....
T Consensus 13 ~~yHPg~~~~GkW~CC~q~ 31 (64)
T 2e6i_A 13 PKYHPNFWMDGKWRCCSQL 31 (64)
T ss_dssp CEECSSCBCSSSBSSSCCS
T ss_pred hhcCCCceeCCeECCCCCC
Confidence 459999999887 555433
No 72
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=23.23 E-value=43 Score=24.35 Aligned_cols=25 Identities=24% Similarity=0.619 Sum_probs=21.4
Q ss_pred CCCEEEEEEEcCCCCC-------CCCCeeeec
Q 032754 55 EGGYFPLTLYFSEDYP-------SKPPKCKFP 79 (134)
Q Consensus 55 ~gg~f~~~i~fp~~YP-------~~pP~v~f~ 79 (134)
+.|.|.|+=.+|--|| ..||.|.|.
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~ 165 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFS 165 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEE
Confidence 4689999999999998 478988876
No 73
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=23.08 E-value=43 Score=25.35 Aligned_cols=25 Identities=12% Similarity=0.283 Sum_probs=20.9
Q ss_pred CCCEEEEEEEcCCCCC------------------CCCCeeeec
Q 032754 55 EGGYFPLTLYFSEDYP------------------SKPPKCKFP 79 (134)
Q Consensus 55 ~gg~f~~~i~fp~~YP------------------~~pP~v~f~ 79 (134)
+.|.|.|+-.+|.-|| ..||.|.|.
T Consensus 187 ~~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~ 229 (312)
T 2xsu_A 187 VNGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYF 229 (312)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEE
Confidence 3588999999999998 568888776
No 74
>2d37_A Hypothetical NADH-dependent FMN oxidoreductase; flavin reductase; HET: FMN NAD; 1.70A {Sulfolobus tokodaii} PDB: 2d36_A* 2d38_A*
Probab=22.73 E-value=22 Score=24.24 Aligned_cols=29 Identities=14% Similarity=0.023 Sum_probs=24.0
Q ss_pred CCCCeeeec---CCCccCCCCCCCceeeccCC
Q 032754 71 SKPPKCKFP---QGFFHPNVYPSGTVCLSILN 99 (134)
Q Consensus 71 ~~pP~v~f~---t~i~HPnV~~~G~vcl~~l~ 99 (134)
..||.|.+. ++--|+||.++|..|+++|.
T Consensus 60 ~~PPlv~v~i~~~~~T~~~i~~sg~F~Vnvl~ 91 (176)
T 2d37_A 60 LNPPLVSFFADRMKGNDIPYKESKYFVVNFTD 91 (176)
T ss_dssp TTTTEEEEEEEGGGTTTHHHHTCSEEEEEEEC
T ss_pred CCCCEEEEEECCCchHHHHHHhCCeEEEEchh
Confidence 468888776 45679999999999999997
No 75
>4dac_A Computationally designed crystal forming protein; alpha-helix, three-helix bundle, coiled-coil protein, DE NOV computational protein design; 2.10A {Synthetic}
Probab=22.44 E-value=71 Score=14.75 Aligned_cols=15 Identities=20% Similarity=0.136 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHc
Q 032754 7 ARGRLTEERKAWRKN 21 (134)
Q Consensus 7 ~~kRl~~El~~l~~~ 21 (134)
..|||.+|.-.|..+
T Consensus 9 nvkrlekevgklege 23 (28)
T 4dac_A 9 NVKRLEKEVGKLEGE 23 (28)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHhhhhhh
Confidence 469999999888643
No 76
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=22.00 E-value=46 Score=25.15 Aligned_cols=24 Identities=17% Similarity=0.365 Sum_probs=20.8
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeeeec
Q 032754 56 GGYFPLTLYFSEDYP------------------SKPPKCKFP 79 (134)
Q Consensus 56 gg~f~~~i~fp~~YP------------------~~pP~v~f~ 79 (134)
.|.|.|+=.+|.-|| .+||.|.|.
T Consensus 184 ~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~ 225 (311)
T 2azq_A 184 EGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFF 225 (311)
T ss_dssp TCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEE
Confidence 588999999999998 568998886
No 77
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=21.78 E-value=48 Score=24.87 Aligned_cols=25 Identities=16% Similarity=0.312 Sum_probs=21.1
Q ss_pred CCCEEEEEEEcCCCCC------------------CCCCeeeec
Q 032754 55 EGGYFPLTLYFSEDYP------------------SKPPKCKFP 79 (134)
Q Consensus 55 ~gg~f~~~i~fp~~YP------------------~~pP~v~f~ 79 (134)
+.|.|.|+=.+|.-|| .+||.|.|.
T Consensus 183 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 225 (293)
T 1tmx_A 183 PDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFM 225 (293)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEE
Confidence 4688999999999998 458888876
No 78
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=21.46 E-value=63 Score=14.67 Aligned_cols=13 Identities=15% Similarity=0.258 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHH
Q 032754 7 ARGRLTEERKAWR 19 (134)
Q Consensus 7 ~~kRl~~El~~l~ 19 (134)
..|.|.+|+++-+
T Consensus 9 lqkkirkelkqrq 21 (26)
T 1m46_B 9 LQKKIRKELKQRQ 21 (26)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3577888887543
No 79
>2ecu_A Flavin reductase (HPAC) of 4-hydroxyphenylacetate monooxygnease; flavin diffusible, two-component monooxyge oxidoreductase; HET: 1PG 12P; 1.30A {Thermus thermophilus} PDB: 2ecr_A* 2ed4_A*
Probab=21.22 E-value=13 Score=24.49 Aligned_cols=31 Identities=23% Similarity=0.415 Sum_probs=25.3
Q ss_pred CCCCeeeec---CCCccCCCCCCCceeeccCCCC
Q 032754 71 SKPPKCKFP---QGFFHPNVYPSGTVCLSILNED 101 (134)
Q Consensus 71 ~~pP~v~f~---t~i~HPnV~~~G~vcl~~l~~~ 101 (134)
..||.|.+. ++--|+||.++|..|+++|..+
T Consensus 40 ~~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 73 (149)
T 2ecu_A 40 LEPPLVALAVSERAKLLPVLEGAGAFTVSLLREG 73 (149)
T ss_dssp TTTTEEEEEEETTCTHHHHHHHHTEEEEEECBTT
T ss_pred CCCCEEEEEECCCChhHHHHHhCCEEEEEECcHH
Confidence 358888776 4566999999999999999874
No 80
>1f53_A Yeast killer toxin-like protein; killer toxin-like protein,SKLP, crystallin family; NMR {Streptomyces SP} SCOP: b.11.1.4
Probab=21.08 E-value=34 Score=20.53 Aligned_cols=12 Identities=42% Similarity=0.910 Sum_probs=9.9
Q ss_pred CCCCCCCeeeec
Q 032754 68 DYPSKPPKCKFP 79 (134)
Q Consensus 68 ~YP~~pP~v~f~ 79 (134)
.||..||+|+..
T Consensus 70 t~Pn~Pp~V~~i 81 (84)
T 1f53_A 70 TYPNRPPKVNSI 81 (84)
T ss_dssp CCSSSCCCCCBC
T ss_pred ecCCCCCcccEE
Confidence 689999998753
No 81
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=20.66 E-value=1.5e+02 Score=18.18 Aligned_cols=25 Identities=16% Similarity=0.291 Sum_probs=19.7
Q ss_pred CCCEEEEEEEcCCCCCCCCCeeeecC
Q 032754 55 EGGYFPLTLYFSEDYPSKPPKCKFPQ 80 (134)
Q Consensus 55 ~gg~f~~~i~fp~~YP~~pP~v~f~t 80 (134)
.+..+...+.|+..|+. +|+|.+.-
T Consensus 27 g~R~~~~~V~F~~~F~~-~P~V~v~l 51 (101)
T 2ccv_A 27 NTRELAKNITFASPYCR-PPVVLLSI 51 (101)
T ss_dssp SCEEEEEEEECSSCCSS-CCEEEEEE
T ss_pred cceEEEEEeEeCcccCC-CCEEEEEe
Confidence 34567888999999985 99987764
No 82
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=20.35 E-value=53 Score=23.83 Aligned_cols=25 Identities=20% Similarity=0.416 Sum_probs=21.7
Q ss_pred CCCEEEEEEEcCCCCCC-------CCCeeeec
Q 032754 55 EGGYFPLTLYFSEDYPS-------KPPKCKFP 79 (134)
Q Consensus 55 ~gg~f~~~i~fp~~YP~-------~pP~v~f~ 79 (134)
+.|.|.|+=.+|--||. .||.|.|.
T Consensus 133 ~~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~ 164 (238)
T 3t63_M 133 SDGYYSFRTIKPGPAPWRNGPNDWRPAHIYFG 164 (238)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEECCcCccCCCCCCCCcCCeEEEE
Confidence 35899999999999986 78988887
Done!