BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032755
MSLSLQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFI
HIDPAYFQFSPSTMDQLGLEGCKAHSSNICVDDLDIDAVVYNTLSTKFPEVFFLFPVLFA
CSMKFKVYLWSIGY

High Scoring Gene Products

Symbol, full name Information P value
AT2G47830 protein from Arabidopsis thaliana 4.1e-28
CBU_1362
cation-efflux family protein
protein from Coxiella burnetii RSA 493 2.0e-07
GSU_2613
cation efflux family protein
protein from Geobacter sulfurreducens PCA 5.5e-06
fieF
Cation diffusion facilitator family transporter FieF
protein from Pseudomonas protegens Pf-5 3.3e-05
CHY_0502
cation efflux family protein
protein from Carboxydothermus hydrogenoformans Z-2901 4.4e-05
DET_0331
cation efflux family protein
protein from Dehalococcoides ethenogenes 195 7.6e-05
SO_4475
cation efflux family protein
protein from Shewanella oneidensis MR-1 0.00015
BA_4640
cation efflux family protein
protein from Bacillus anthracis str. Ames 0.00041

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032755
        (134 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2043328 - symbol:AT2G47830 species:3702 "Arabi...   315  4.1e-28   1
TIGR_CMR|CBU_1362 - symbol:CBU_1362 "cation-efflux family...   126  2.0e-07   1
TIGR_CMR|GSU_2613 - symbol:GSU_2613 "cation efflux family...   111  5.5e-06   1
UNIPROTKB|Q4K5J6 - symbol:fieF "Cation diffusion facilita...   104  3.3e-05   1
TIGR_CMR|CHY_0502 - symbol:CHY_0502 "cation efflux family...   103  4.4e-05   1
TIGR_CMR|DET_0331 - symbol:DET_0331 "cation efflux family...   101  7.6e-05   1
TIGR_CMR|SO_4475 - symbol:SO_4475 "cation efflux family p...    98  0.00015   1
TIGR_CMR|BA_4640 - symbol:BA_4640 "cation efflux family p...    94  0.00041   1
ASPGD|ASPL0000052398 - symbol:AN10155 species:162425 "Eme...    93  0.00085   1


>TAIR|locus:2043328 [details] [associations]
            symbol:AT2G47830 species:3702 "Arabidopsis thaliana"
            [GO:0006812 "cation transport" evidence=IEA;ISS] [GO:0008324
            "cation transmembrane transporter activity" evidence=IEA;ISS]
            [GO:0015562 "efflux transmembrane transporter activity"
            evidence=ISS] [GO:0016020 "membrane" evidence=ISS] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0055085 "transmembrane
            transport" evidence=IEA] InterPro:IPR002524 Pfam:PF01545
            GO:GO:0016021 GO:GO:0005774 EMBL:CP002685 GenomeReviews:CT485783_GR
            EMBL:AC005309 PANTHER:PTHR11562 TIGRFAMs:TIGR01297 GO:GO:0008324
            eggNOG:COG0053 EMBL:AY139998 EMBL:BT006611 IPI:IPI00537601
            IPI:IPI00542773 PIR:A84920 RefSeq:NP_182304.2 RefSeq:NP_850480.1
            UniGene:At.43449 ProteinModelPortal:Q8L725 SMR:Q8L725
            EnsemblPlants:AT2G47830.1 GeneID:819395 KEGG:ath:AT2G47830
            GeneFarm:5024 TAIR:At2g47830 HOGENOM:HOG000030754 InParanoid:Q8L725
            OMA:EVFIHID PhylomeDB:Q8L725 ProtClustDB:CLSN2680304
            Genevestigator:Q8L725 GermOnline:AT2G47830 Uniprot:Q8L725
        Length = 471

 Score = 315 (115.9 bits), Expect = 4.1e-28, P = 4.1e-28
 Identities = 65/103 (63%), Positives = 77/103 (74%)

Query:     5 LQGCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
             ++GCHRLRGRRAGSSLYLDVHIVVDPFSSVS AH VGE VR QI+ +HPEVSEVFIHIDP
Sbjct:   307 VKGCHRLRGRRAGSSLYLDVHIVVDPFSSVSVAHEVGEYVRRQINLNHPEVSEVFIHIDP 366

Query:    65 AYFQFSPSTMDQLGLEGCKAHSSNICVDDLDIDAVVYNTLSTK 107
             A+ QFS ST D   +       SNIC +   ++A V +  S++
Sbjct:   367 AFLQFSCSTKDHDSI----TKESNICQEIKHVEATVSDIFSSQ 405


>TIGR_CMR|CBU_1362 [details] [associations]
            symbol:CBU_1362 "cation-efflux family protein"
            species:227377 "Coxiella burnetii RSA 493" [GO:0006812 "cation
            transport" evidence=ISS] [GO:0008324 "cation transmembrane
            transporter activity" evidence=ISS] [GO:0015562 "efflux
            transmembrane transporter activity" evidence=ISS]
            InterPro:IPR002524 Pfam:PF01545 GO:GO:0016021 EMBL:AE016828
            GenomeReviews:AE016828_GR PANTHER:PTHR11562 TIGRFAMs:TIGR01297
            GO:GO:0008324 HOGENOM:HOG000062182 OMA:GVHSISD RefSeq:NP_820351.1
            ProteinModelPortal:Q83BX5 GeneID:1209268 KEGG:cbu:CBU_1362
            PATRIC:17931467 ProtClustDB:CLSK914730
            BioCyc:CBUR227377:GJ7S-1352-MONOMER Uniprot:Q83BX5
        Length = 378

 Score = 126 (49.4 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query:     9 HRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
             H+LR R  G ++++DVHI V P  SVS  H VGE V   + KS   V++V +HIDP
Sbjct:   237 HQLRTRYHGGNIFVDVHIQVAPDISVSEGHYVGEQVHLTLLKSVEHVADVTVHIDP 292


>TIGR_CMR|GSU_2613 [details] [associations]
            symbol:GSU_2613 "cation efflux family protein"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0006812 "cation
            transport" evidence=ISS] [GO:0008324 "cation transmembrane
            transporter activity" evidence=ISS] [GO:0015562 "efflux
            transmembrane transporter activity" evidence=ISS]
            InterPro:IPR002524 Pfam:PF01545 GO:GO:0016021 EMBL:AE017180
            GenomeReviews:AE017180_GR PANTHER:PTHR11562 TIGRFAMs:TIGR01297
            GO:GO:0008324 RefSeq:NP_953658.1 ProteinModelPortal:Q749X9
            GeneID:2686282 KEGG:gsu:GSU2613 PATRIC:22028079
            HOGENOM:HOG000062182 OMA:KSSMLVA ProtClustDB:CLSK828907
            BioCyc:GSUL243231:GH27-2601-MONOMER Uniprot:Q749X9
        Length = 296

 Score = 111 (44.1 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 20/56 (35%), Positives = 34/56 (60%)

Query:     9 HRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
             H +RGRR+G  + +D+ + +DP  +V  +H +   V+  I +  P V +V IHI+P
Sbjct:   230 HEIRGRRSGQYIIIDLKLDMDPEMTVKQSHDIATCVKKLIFERFPNVGDVMIHINP 285


>UNIPROTKB|Q4K5J6 [details] [associations]
            symbol:fieF "Cation diffusion facilitator family
            transporter FieF" species:220664 "Pseudomonas protegens Pf-5"
            [GO:0005506 "iron ion binding" evidence=ISS] [GO:0006826 "iron ion
            transport" evidence=ISS] [GO:0008324 "cation transmembrane
            transporter activity" evidence=ISS] [GO:0016021 "integral to
            membrane" evidence=ISS] InterPro:IPR002524 Pfam:PF01545
            GO:GO:0016021 GO:GO:0005506 EMBL:CP000076 GenomeReviews:CP000076_GR
            GO:GO:0006826 PANTHER:PTHR11562 TIGRFAMs:TIGR01297 GO:GO:0008324
            eggNOG:COG0053 HOGENOM:HOG000069673 OMA:IVIISIN RefSeq:YP_262487.1
            ProteinModelPortal:Q4K5J6 STRING:Q4K5J6 GeneID:3479811
            KEGG:pfl:PFL_5419 PATRIC:19880323 ProtClustDB:CLSK868354
            BioCyc:PFLU220664:GIX8-5455-MONOMER Uniprot:Q4K5J6
        Length = 298

 Score = 104 (41.7 bits), Expect = 3.3e-05, P = 3.3e-05
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query:     7 GCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
             G H LR R +GS  ++ +H+ +    ++S AHG+ +     I K++P  +EV +H DP
Sbjct:   232 GAHDLRTRISGSHWFVQLHLELPGELTLSVAHGISDQAADAIQKAYPR-AEVLVHADP 288


>TIGR_CMR|CHY_0502 [details] [associations]
            symbol:CHY_0502 "cation efflux family protein"
            species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0006812 "cation transport" evidence=ISS] [GO:0008324 "cation
            transmembrane transporter activity" evidence=ISS] [GO:0015562
            "efflux transmembrane transporter activity" evidence=ISS]
            InterPro:IPR002524 Pfam:PF01545 GO:GO:0016021 EMBL:CP000141
            GenomeReviews:CP000141_GR PANTHER:PTHR11562 TIGRFAMs:TIGR01297
            GO:GO:0008324 eggNOG:COG0053 HOGENOM:HOG000069673
            RefSeq:YP_359360.1 ProteinModelPortal:Q3AES4 STRING:Q3AES4
            GeneID:3727451 KEGG:chy:CHY_0502 PATRIC:21274155 OMA:INAVWAR
            ProtClustDB:CLSK2772317 BioCyc:CHYD246194:GJCN-503-MONOMER
            Uniprot:Q3AES4
        Length = 303

 Score = 103 (41.3 bits), Expect = 4.4e-05, P = 4.4e-05
 Identities = 20/56 (35%), Positives = 32/56 (57%)

Query:     9 HRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
             H+LR R++GS  ++D+H+VV    SV   H +   +  +I +  P  S V IH +P
Sbjct:   230 HKLRARKSGSERFIDLHLVVPEKLSVKEVHDLCNKIEREIEEKLPN-SHVLIHAEP 284


>TIGR_CMR|DET_0331 [details] [associations]
            symbol:DET_0331 "cation efflux family protein"
            species:243164 "Dehalococcoides ethenogenes 195" [GO:0006812
            "cation transport" evidence=ISS] [GO:0008324 "cation transmembrane
            transporter activity" evidence=ISS] [GO:0015562 "efflux
            transmembrane transporter activity" evidence=ISS]
            InterPro:IPR002524 Pfam:PF01545 GO:GO:0016021 EMBL:CP000027
            GenomeReviews:CP000027_GR PANTHER:PTHR11562 TIGRFAMs:TIGR01297
            GO:GO:0008324 eggNOG:COG0053 HOGENOM:HOG000069673
            RefSeq:YP_181078.1 ProteinModelPortal:Q3Z9M1 STRING:Q3Z9M1
            GeneID:3230397 KEGG:det:DET0331 PATRIC:21607731 OMA:RRYESIT
            ProtClustDB:CLSK837556 BioCyc:DETH243164:GJNF-331-MONOMER
            Uniprot:Q3Z9M1
        Length = 311

 Score = 101 (40.6 bits), Expect = 7.6e-05, P = 7.6e-05
 Identities = 25/81 (30%), Positives = 43/81 (53%)

Query:     9 HRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAYFQ 68
             H LR R+AGS  Y+D+H+V+    SV  AH + +++   + K   ++  V IH++P   +
Sbjct:   230 HNLRTRKAGSYRYVDLHLVMPKTLSVEKAHSICDHLEKDL-KDKLKIDYVTIHVEPCTEE 288

Query:    69 FSPSTMDQLGLEGCKAHSSNI 89
               P    Q+    CK   S++
Sbjct:   289 NCPEC--QIN---CKKRPSDL 304


>TIGR_CMR|SO_4475 [details] [associations]
            symbol:SO_4475 "cation efflux family protein"
            species:211586 "Shewanella oneidensis MR-1" [GO:0006812 "cation
            transport" evidence=ISS] [GO:0008324 "cation transmembrane
            transporter activity" evidence=ISS] InterPro:IPR002524 Pfam:PF01545
            GO:GO:0016021 EMBL:AE014299 GenomeReviews:AE014299_GR
            PANTHER:PTHR11562 TIGRFAMs:TIGR01297 GO:GO:0008324
            HOGENOM:HOG000069673 KO:K13283 OMA:IAMEDPR RefSeq:NP_719996.1
            PDB:3J1Z PDBsum:3J1Z ProteinModelPortal:Q8E919 GeneID:1172070
            KEGG:son:SO_4475 PATRIC:23528601 ProtClustDB:CLSK907664
            Uniprot:Q8E919
        Length = 296

 Score = 98 (39.6 bits), Expect = 0.00015, P = 0.00015
 Identities = 23/67 (34%), Positives = 39/67 (58%)

Query:     7 GCHRLRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDPAY 66
             G H LR R+AG ++++  H+ +D   S++ AH + +    ++ K+  E +EV IH DP  
Sbjct:   232 GLHDLRTRQAGKTVFIQFHLELDGNLSLNEAHSITDTTGLRV-KAAFEDAEVIIHQDPV- 289

Query:    67 FQFSPST 73
              Q  P+T
Sbjct:   290 -QVEPTT 295


>TIGR_CMR|BA_4640 [details] [associations]
            symbol:BA_4640 "cation efflux family protein"
            species:198094 "Bacillus anthracis str. Ames" [GO:0006812 "cation
            transport" evidence=ISS] [GO:0008324 "cation transmembrane
            transporter activity" evidence=ISS] [GO:0015562 "efflux
            transmembrane transporter activity" evidence=ISS]
            InterPro:IPR002524 Pfam:PF01545 GO:GO:0016021 EMBL:AE016879
            EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
            PANTHER:PTHR11562 TIGRFAMs:TIGR01297 GO:GO:0008324
            HOGENOM:HOG000062182 RefSeq:NP_846857.1 RefSeq:YP_021287.1
            RefSeq:YP_030552.1 DNASU:1085522 EnsemblBacteria:EBBACT00000011259
            EnsemblBacteria:EBBACT00000014373 EnsemblBacteria:EBBACT00000020418
            GeneID:1085522 GeneID:2814861 GeneID:2849270 KEGG:ban:BA_4640
            KEGG:bar:GBAA_4640 KEGG:bat:BAS4305 OMA:GVHSISD
            ProtClustDB:CLSK872799 BioCyc:BANT260799:GJAJ-4360-MONOMER
            BioCyc:BANT261594:GJ7F-4510-MONOMER Uniprot:Q81LH9
        Length = 298

 Score = 94 (38.1 bits), Expect = 0.00041, P = 0.00041
 Identities = 18/54 (33%), Positives = 31/54 (57%)

Query:    11 LRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHIDP 64
             L  R  G  + +D+ + VDP+ +V   H +G++V+  + K    V  VF+HI+P
Sbjct:   242 LYAREHGHYVIVDIKVSVDPYITVEEGHRIGKHVKETLMKQD-NVQNVFVHINP 294


>ASPGD|ASPL0000052398 [details] [associations]
            symbol:AN10155 species:162425 "Emericella nidulans"
            [GO:0055085 "transmembrane transport" evidence=IEA] [GO:0006812
            "cation transport" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0008324 "cation transmembrane transporter
            activity" evidence=IEA] EMBL:BN001308 EnsemblFungi:CADANIAT00001482
            HOGENOM:HOG000205012 OMA:HDEHKAV GO:GO:0016021 GO:GO:0008324
            InterPro:IPR002524 PANTHER:PTHR11562 Pfam:PF01545
            TIGRFAMs:TIGR01297 Uniprot:C8VTA0
        Length = 401

 Score = 93 (37.8 bits), Expect = 0.00085, P = 0.00085
 Identities = 18/53 (33%), Positives = 33/53 (62%)

Query:    11 LRGRRAGSSLYLDVHIVVDPFSSVSAAHGVGENVRHQIHKSHPEVSEVFIHID 63
             +R   +G  L ++V IV+DP  S+ A H V E ++ ++ +S P+V   ++H+D
Sbjct:   335 VRAYTSGPRLVVEVDIVMDPSDSLRATHDVAEELQTKL-ESLPDVERAYVHVD 386


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.416    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      134       122   0.00091  102 3  11 22  0.47    30
                                                     29  0.49    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  563 (60 KB)
  Total size of DFA:  132 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.67u 0.12s 12.79t   Elapsed:  00:00:01
  Total cpu time:  12.67u 0.12s 12.79t   Elapsed:  00:00:01
  Start:  Mon May 20 20:24:13 2013   End:  Mon May 20 20:24:14 2013

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