BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032758
(134 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54ND3|UXT_DICDI Protein UXT homolog OS=Dictyostelium discoideum GN=DDB_G0285389
PE=3 SV=1
Length = 161
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 70/99 (70%)
Query: 26 DLRKNIENLEKNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFI 85
+L+ NIE L +N + S++T++NLGSE Y++A V DT +I+VDIGLG HV++T EA+KFI
Sbjct: 63 ELKSNIELLIENKMDSMKTMINLGSECYVKARVQDTSYIYVDIGLGIHVKYTLEEAIKFI 122
Query: 86 SQREDKIARQIDEYTRLIASIKAQIKLVCEGICELLQLP 124
+++E + + ++ T+ I IK +I L+ G+ EL L
Sbjct: 123 NEKETFLNKTVENQTKKINQIKTKIDLIQNGLKELKHLE 161
>sp|A7T0W1|UXT_NEMVE Protein UXT homolog OS=Nematostella vectensis GN=v1g140887 PE=3
SV=1
Length = 159
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 25 SDLRKNIENLEKNSVTS--LRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEAL 82
+ L+ +IE ++K + LR+ V+LG + QA VPD IF+ +G GF VEFT SEAL
Sbjct: 48 TQLKSSIEQIQKTDLKGKDLRSRVDLGCNFFCQASVPDPSRIFIAVGYGFFVEFTLSEAL 107
Query: 83 KFISQREDKIARQIDEYTRLIASIKAQIKLVCEGICEL 120
FI ++ + +D+ + A IKA +KLV G+ EL
Sbjct: 108 NFIEKKLAHLQHSVDKLGKDAAKIKAHMKLVLGGLQEL 145
>sp|Q9WTZ0|UXT_MOUSE Protein UXT OS=Mus musculus GN=Uxt PE=2 SV=1
Length = 157
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%)
Query: 27 LRKNIENLEKNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFIS 86
LR IE L++ + + L V+LG ++ VPDT I+V +G GF +E T +EALKFI
Sbjct: 52 LRNVIERLQETNHSELYMQVDLGCNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFID 111
Query: 87 QREDKIARQIDEYTRLIASIKAQIKLVCEGICEL 120
++ + D T+ +IKA I ++ EG+ EL
Sbjct: 112 RKSSLLTELSDSLTKDSMNIKAHIHMMLEGLREL 145
>sp|Q63ZY7|UXT_RAT Protein UXT OS=Rattus norvegicus GN=Uxt PE=2 SV=1
Length = 157
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%)
Query: 27 LRKNIENLEKNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFIS 86
LR IE L++ + + L V+LG ++ VPDT I+V +G GF +E T +EALKFI
Sbjct: 52 LRNVIERLQETNHSELYMQVDLGCNFFVDTMVPDTSRIYVALGYGFFLELTLAEALKFID 111
Query: 87 QREDKIARQIDEYTRLIASIKAQIKLVCEGICEL 120
++ + D T+ +IKA I ++ EG+ EL
Sbjct: 112 RKSSLLTELSDSLTKDSMNIKANIHMMLEGLREL 145
>sp|Q32P97|UXT_BOVIN Protein UXT OS=Bos taurus GN=UXT PE=2 SV=1
Length = 156
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%)
Query: 27 LRKNIENLEKNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFIS 86
LR IE L++ + + L V+LG ++ VPDT I+V +G GF +E T +EALKFI
Sbjct: 52 LRNVIERLQEANHSELYMQVDLGCNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFID 111
Query: 87 QREDKIARQIDEYTRLIASIKAQIKLVCEGICEL 120
++ + D T+ +IKA I ++ EG+ EL
Sbjct: 112 RKSSLLTELSDNLTKDSMNIKAHIHMLLEGLREL 145
>sp|Q9UBK9|UXT_HUMAN Protein UXT OS=Homo sapiens GN=UXT PE=1 SV=1
Length = 157
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%)
Query: 27 LRKNIENLEKNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFIS 86
LR IE L++ + L V+LG ++ VPDT I+V +G GF +E T +EALKFI
Sbjct: 52 LRNVIERLQEAKHSELYMQVDLGCNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFID 111
Query: 87 QREDKIARQIDEYTRLIASIKAQIKLVCEGICEL 120
++ + + T+ +IKA I ++ EG+ EL
Sbjct: 112 RKSSLLTELSNSLTKDSMNIKAHIHMLLEGLREL 145
>sp|O28216|PFDA_ARCFU Prefoldin subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=pfdA PE=3 SV=1
Length = 137
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 25 SDLRKNIENLE--KNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEAL 82
++ RK +E LE ++ TS+ L+NLG V+ DV +++ + VDIG G VE EA+
Sbjct: 36 NEYRKTLETLEFFESIDTSVEALMNLGGGVFAYVDVKNSKKMLVDIGSGVVVEREVGEAI 95
Query: 83 KFISQREDKIARQIDEYTRLIASIKAQIKLVCEGIC 118
+F+ R KI ++ T ++ + +Q + + + +
Sbjct: 96 EFVKNRIKKIEENQEKMTSMLQQVLSQAQRIQQELA 131
>sp|Q12ZJ7|PFDA_METBU Prefoldin subunit alpha OS=Methanococcoides burtonii (strain DSM
6242) GN=pfdA PE=3 SV=1
Length = 138
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 40/62 (64%)
Query: 36 KNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQ 95
K++ ++ T++ LG+ + A++ D I V +G G VE T +EA++ ++QR++++ +
Sbjct: 51 KSASGAINTMIPLGAGALIHANIADVDKIVVSVGAGISVEKTPTEAIETLTQRKEELGKV 110
Query: 96 ID 97
++
Sbjct: 111 VE 112
>sp|Q8HYI9|PFD5_BOVIN Prefoldin subunit 5 OS=Bos taurus GN=PFDN5 PE=2 SV=1
Length = 154
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 27 LRKNIENLEKNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFIS 86
L+KN E E LV L S +Y+ + D +H+ +D+G G++VE T +A F
Sbjct: 53 LKKNNEGKE--------LLVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFK 104
Query: 87 QREDKIARQIDEYTRLIASIKAQIKLVCEGICELLQ 122
++ D + +Q+++ + A + V E + + +Q
Sbjct: 105 RKIDFLTKQMEKIQPALQEKHAMKQAVMEMMSQKIQ 140
>sp|Q99471|PFD5_HUMAN Prefoldin subunit 5 OS=Homo sapiens GN=PFDN5 PE=1 SV=2
Length = 154
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 45 LVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLIA 104
LV L S +Y+ + D +H+ +D+G G++VE T +A F ++ D + +Q+++ +
Sbjct: 63 LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQ 122
Query: 105 SIKAQIKLVCEGICELLQ 122
A + V E + + +Q
Sbjct: 123 EKHAMKQAVMEMMSQKIQ 140
>sp|Q9WU28|PFD5_MOUSE Prefoldin subunit 5 OS=Mus musculus GN=Pfdn5 PE=1 SV=1
Length = 154
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 45 LVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLIA 104
LV L S +Y+ + D +H+ +D+G G++VE T +A F ++ D + +Q+++ +
Sbjct: 63 LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQ 122
Query: 105 SIKAQIKLVCEGICELLQ 122
A + V E + + +Q
Sbjct: 123 EKHAMKQAVMEMMSQKIQ 140
>sp|Q5RAY0|PFD5_PONAB Prefoldin subunit 5 OS=Pongo abelii GN=PFDN5 PE=2 SV=1
Length = 154
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 45 LVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDE 98
LV L S +Y+ + D +H+ +D+G G++VE T +A F ++ D + +Q+++
Sbjct: 63 LVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEK 116
>sp|Q04493|PFD5_YEAST Prefoldin subunit 5 OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=GIM5 PE=1 SV=1
Length = 163
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 43 RTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQ------- 95
+ LV + +Y+ + D + VDIG G++VE + A+ F ++ DK+ ++
Sbjct: 63 KLLVPASASLYIPGKIVDNKKFMVDIGTGYYVEKSAEAAIAFYQKKVDKLNKESVQIQDI 122
Query: 96 IDEYTRLIASIKAQIK 111
I E T+ SI+AQI+
Sbjct: 123 IKEKTQYSLSIEAQIR 138
>sp|A2STI6|PFDA_METLZ Prefoldin subunit alpha OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=pfdA PE=3 SV=1
Length = 147
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 44 TLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLI 103
TL+NLG + + A V DT+ I V IG G VE EA+ F+ R ++ + +
Sbjct: 64 TLLNLGGGISVHAIVTDTKKILVGIGAGITVEKPVEEAITFLHDRVTEMDASAKRLSESL 123
Query: 104 ASIKAQIKLVCEGICEL 120
++ Q++ V + + E+
Sbjct: 124 GKLQEQMRAVEQRMQEI 140
>sp|Q5JIE3|PFDA1_PYRKO Prefoldin subunit alpha 1 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pfdA1 PE=3 SV=1
Length = 146
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 15 LVYLTLNAGSSDLRKNIENLE--KNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGF 72
L LTL G ++ + E LE KN LV +G+ +++ + D ++ V +G G+
Sbjct: 29 LELLTL--GRNEFQAVKETLEGLKNEEGEFEILVPIGAGSFLKGKIVDAKNAIVSVGAGY 86
Query: 73 HVEFTWSEALKFISQREDKIARQIDEYTRLIASIKAQIKLVCEGICELLQLPAETSVQEA 132
V+ + ++++++ +R I EY IA + +K + + EL + E ++A
Sbjct: 87 AVQKSLDDSIEYLEKR-------IKEYEEAIAKTQEALKKLEAQLGELARQAQEIQQKQA 139
Query: 133 I 133
+
Sbjct: 140 M 140
>sp|A8XPL7|PFD5_CAEBR Probable prefoldin subunit 5 OS=Caenorhabditis briggsae GN=pfd-5
PE=3 SV=2
Length = 154
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 11 CFFYLVYLTLNAGSSDLRKNIENLE--KNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDI 68
FF + L A S K+I LE K L+ L +Y++A++ D V+I
Sbjct: 30 TFFQDSFNALKALLSRNEKSISALEDVKVGTAGHTALIPLSESLYIRAELSDPNKHMVEI 89
Query: 69 GLGFHVEFTWSEALKFISQREDKIARQID 97
G G+ VE +A ++++ IA+Q++
Sbjct: 90 GTGYFVELDREKAKGIFDRKKEHIAKQVE 118
>sp|Q8TUY7|PFDA_METKA Prefoldin subunit alpha OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=pfdA PE=3 SV=1
Length = 157
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 45 LVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFI-SQRED 90
LV +G++ +++A V DT+ + V IG G VE T EAL+ I QR++
Sbjct: 65 LVPVGAQSFVRACVTDTERVIVGIGAGVAVERTIDEALESIDDQRQE 111
>sp|A4YH83|PFDA_METS5 Prefoldin subunit alpha OS=Metallosphaera sedula (strain ATCC 51363
/ DSM 5348) GN=pfdA PE=3 SV=1
Length = 144
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 26/112 (23%)
Query: 22 AGSSDLRKNIENLEK---------NSVTSLRTLVNL----GSEVYMQAD----------- 57
A + LRK I+ L+K N+ S + +NL G ++ + AD
Sbjct: 17 AQADALRKEIDALQKLRDEIAESLNAARSAKEAINLIKGQGKDLLLSADRRGFVLLKVTE 76
Query: 58 VPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYT-RLIASIKA 108
+P ++ + V++GLG++ E +A K + +RE+++ + + + T RL ++ A
Sbjct: 77 IPSSK-VLVNLGLGYYAEIEPDQASKILDEREEQLNKSLQDITARLNNAVNA 127
>sp|Q46F99|PFDA_METBF Prefoldin subunit alpha OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=pfdA PE=3 SV=1
Length = 144
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 13/89 (14%)
Query: 44 TLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLI 103
T+V +G ++ A++ + + VD+G GF E T EA++ + +R++++ T+++
Sbjct: 62 TMVPVGFGSFVYAEIKNADKVIVDLGAGFSAEETADEAVETLKRRKEQL-------TKIL 114
Query: 104 ASIKAQIKLVCEGI------CELLQLPAE 126
+ A + +G+ E LQ P++
Sbjct: 115 EQMSASLTKYIQGMQALEVEAEKLQQPSQ 143
>sp|A9A592|PFDA_NITMS Prefoldin subunit alpha OS=Nitrosopumilus maritimus (strain SCM1)
GN=pfdA PE=3 SV=1
Length = 145
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 29 KNIENLEKNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQR 88
++I++L KN + TLV +G Y+ + I ++IG G VE + A+ ++ +R
Sbjct: 42 ESIKSLSKNPESD--TLVPIGLGTYVPTKISSDSKIILNIGAGVAVEKDFPSAINYLEER 99
Query: 89 --------EDKIARQIDEYTRLIASIKAQIKLVCEGICELLQLP 124
+D A++ D RL KAQ+ + + + + Q P
Sbjct: 100 IKEIEIAIQDTAAKKQDAAQRLEQG-KAQVNQLMQAMQQSGQPP 142
>sp|Q54V55|PFD5_DICDI Probable prefoldin subunit 5 OS=Dictyostelium discoideum GN=pfdn5
PE=3 SV=1
Length = 160
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 45 LVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDE 98
LV L S +Y+ + + + VDIG G++VE + F +++ I Q+++
Sbjct: 66 LVPLTSSIYLPGKINSNEKVLVDIGTGYYVEMGIEQGQNFSNRKVQLITEQVNK 119
>sp|Q2U9B0|BRE1_ASPOR E3 ubiquitin-protein ligase bre1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=bre1 PE=3 SV=1
Length = 760
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 22 AGSSDLRKNIENLEKNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEF-TWSE 80
A +SD + L+K + T VN GS+ + AD+P + V +GL V F ++
Sbjct: 25 AATSDHNDSAPPLKKQA-----TSVNGGSKPHPDADMPWKDDLEVSLGLAGVVGFMSFQG 79
Query: 81 ALKFISQRE--------DKIARQIDEYTRLIASIKAQIK 111
L++ S E D I RQ+ EY R S++A++K
Sbjct: 80 GLRYPSSAEPTTSLTIKDAIWRQMQEYKREKVSLEAKLK 118
>sp|O94307|PFD5_SCHPO Probable prefoldin subunit 5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=bob1 PE=1 SV=1
Length = 154
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 45 LVNLGSEVYMQADVP-DTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLI 103
LV L S +Y+ + + VDIG G++VE + EA ++ ++ + +A I+ I
Sbjct: 67 LVPLTSSLYVPGKLNLGNSKLLVDIGTGYYVEKSAGEATEYYKRKCEYLASSIENLNNAI 126
Query: 104 ASIKAQIKLV 113
+ QI+ V
Sbjct: 127 DAKSVQIRAV 136
>sp|O18054|PFD3_CAEEL Probable prefoldin subunit 3 OS=Caenorhabditis elegans GN=pfd-3
PE=3 SV=1
Length = 185
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 41 SLRTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYT 100
S T L +VY +A V + + + +G VE+ A K + + + + +DE T
Sbjct: 87 SFETTFLLSDDVYTKATVQKPEKVSIWLGANVMVEYDLENARKLLDKNRGSVQKVVDELT 146
Query: 101 RLIASIKAQI 110
++ IK QI
Sbjct: 147 NELSYIKDQI 156
>sp|P47124|HOC1_YEAST Putative glycosyltransferase HOC1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HOC1 PE=1 SV=3
Length = 396
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 29/133 (21%)
Query: 1 MSFLIIQLGDCFFYLVYLTLNAGSSDLRKNIENLEKNSVTSLRTLVNLGSEVYMQADVPD 60
M F II L F + YL N+ ++DL+K ++NL K S+ + N+ S
Sbjct: 15 MIFAIIALISLAFGVRYLFHNSNATDLQKILQNLPKEISQSINSANNIQSS--------- 65
Query: 61 TQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLIASIKAQIKLVCEGICEL 120
D L H E E I +++ A+Q D+ Q K++ + I +L
Sbjct: 66 ------DSDLVQHFESLAQE----IRHQQEVQAKQFDK----------QRKILEKKIQDL 105
Query: 121 LQLPAETSVQEAI 133
Q P E +++E I
Sbjct: 106 KQTPPEATLRERI 118
>sp|O27646|PFDA_METTH Prefoldin subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=pfdA PE=1 SV=1
Length = 141
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 44 TLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIA---RQIDEYT 100
TLV +G+ +++A++ DT + + +G G ++ + +A++ I +++++ +++ E
Sbjct: 56 TLVPVGAGSFIKAELKDTSEVIMSVGAGVAIKKNFEDAMESIKSQKNELESTLQKMGENL 115
Query: 101 RLIASI 106
R I I
Sbjct: 116 RKITDI 121
>sp|A3CWZ2|PFDA_METMJ Prefoldin subunit alpha OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=pfdA PE=3 SV=1
Length = 149
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 45 LVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKI 92
L+ +G Y++ V D H+ V+IG VE ++A+ ++ ED+I
Sbjct: 59 LLPIGGGAYLRVKVLDAGHVLVNIGADVSVERATADAVGYL---EDRI 103
>sp|Q9VCZ8|PFD5_DROME Probable prefoldin subunit 5 OS=Drosophila melanogaster GN=CG7048
PE=2 SV=1
Length = 168
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 45 LVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRL 102
LV L S +Y+ V D +DIG G+++E + + +R + + QI++ ++
Sbjct: 72 LVPLTSSMYVPGRVKDLNRFVIDIGTGYYIEKDLEGSKDYFKRRVEYVQEQIEKIEKI 129
>sp|A4WL93|PFDA_PYRAR Prefoldin subunit alpha OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=pfdA PE=3 SV=1
Length = 136
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 45 LVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLIA 104
LV++G+ ++++ V +T+ + +G G+H A + + +R I+EY+RL
Sbjct: 59 LVHIGAGLFVKG-VFETKEVLTPLGAGYHAFLDLDNAERVLQER-------IEEYSRLKT 110
Query: 105 SIKAQIKLVCE 115
S++ I + E
Sbjct: 111 SLEENIGKLAE 121
>sp|Q5HZI1|MTUS1_MOUSE Microtubule-associated tumor suppressor 1 homolog OS=Mus musculus
GN=Mtus1 PE=1 SV=2
Length = 1210
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 28 RKNIENLEKNSVTSLRTLVNLGSEVYMQADVPD 60
R+N ENL+ +L T + S+V MQ D PD
Sbjct: 221 RENFENLQATPSKTLNTTFTVISDVLMQTDSPD 253
>sp|A4IIJ3|KIBRA_XENTR Protein KIBRA OS=Xenopus tropicalis GN=wwc1 PE=2 SV=1
Length = 1108
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Query: 79 SEALKFISQREDKIARQIDEYTRLIASIKAQIK 111
+E LK S+R +++ ++++E TRLIAS++AQ+K
Sbjct: 393 TERLKMSSKR-NQLVKELEETTRLIASLQAQLK 424
>sp|Q58064|PFDA2_METJA Prefoldin subunit alpha 2 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=pfdA2 PE=3 SV=1
Length = 147
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 20 LNAGSSDLRKNIENLEKNSVTSLRTL-------VNLGSEVYMQADVPDTQHIFVDIGLGF 72
L+A + LR+++ L+ SL+TL V +GS ++ V + V +G
Sbjct: 29 LDATIATLRQSLATLK-----SLKTLGEGKTVLVPVGSIAQVEMKVEKMDKVVVSVGQNI 83
Query: 73 HVEFTWSEALKFISQREDKIAR 94
E + EALK+I ED+I +
Sbjct: 84 SAELEYEEALKYI---EDEIKK 102
>sp|A1S220|RL23_SHEAM 50S ribosomal protein L23 OS=Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B) GN=rplW PE=3 SV=1
Length = 100
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 18 LTLNAGSSDLRKNIENLEKNSVTSLRTLVNLGSEVYMQADV---PDTQHIFVDIGLGFHV 74
+ ++A S+++ +E L + V +RTL+N G A V D + +V + G +
Sbjct: 34 VAIDATKSEIKAAVEKLFEVEVAGVRTLINKGKTKRHGARVGRRSDWKKAYVTLAAGADI 93
Query: 75 EFTWSEA 81
+F +EA
Sbjct: 94 DFVGAEA 100
>sp|Q5JE63|PFDA2_PYRKO Prefoldin subunit alpha 2 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pfdA2 PE=3 SV=1
Length = 142
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 46 VNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRLIAS 105
+ LGS V ++ + + + +D+G G V T EA + I +R I +D L+
Sbjct: 62 IPLGSGVAIRGKIENPDDVIMDVGAGILVGATVDEARENIEKR---IKALMDLRLALLRK 118
Query: 106 IKAQIKLVCEGICELLQLPAE 126
I+ + V E + EL ++ E
Sbjct: 119 IEEDTRKVNELLKELQEMQPE 139
>sp|P57742|PFD5_ARATH Probable prefoldin subunit 5 OS=Arabidopsis thaliana GN=At5g23290
PE=1 SV=1
Length = 151
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/66 (21%), Positives = 32/66 (48%)
Query: 43 RTLVNLGSEVYMQADVPDTQHIFVDIGLGFHVEFTWSEALKFISQREDKIARQIDEYTRL 102
+ LV L + +Y+ + + + VDIG G+ +E T + + ++ + + D+ +
Sbjct: 64 KMLVPLTASLYVPGTLDEADKVLVDIGTGYFIEKTMDDGKDYCQRKINLLKSNFDQLFEV 123
Query: 103 IASIKA 108
A K+
Sbjct: 124 AAKKKS 129
>sp|B0UTU8|SYN_HAES2 Asparagine--tRNA ligase OS=Haemophilus somnus (strain 2336) GN=asnS
PE=3 SV=1
Length = 467
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 10 DCFFYLVYLTLNAGSSDLRKNIENLEKNSVTSLRTLVNLGSEVYMQADVPDTQHIFVDIG 69
D Y+ LN DL+ ++++KN +T L+ +N + Q D D I + G
Sbjct: 269 DMLKYVFRAVLNEREDDLKFFEKHVDKNVITRLKDFIN---SDFAQIDYTDAIDILLKSG 325
Query: 70 LGFHVEFTWS 79
F +W
Sbjct: 326 KAFEFPVSWG 335
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,375,906
Number of Sequences: 539616
Number of extensions: 1466840
Number of successful extensions: 4377
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 4339
Number of HSP's gapped (non-prelim): 46
length of query: 134
length of database: 191,569,459
effective HSP length: 100
effective length of query: 34
effective length of database: 137,607,859
effective search space: 4678667206
effective search space used: 4678667206
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)