BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032760
(134 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LC83|RS242_ARATH 40S ribosomal protein S24-2 OS=Arabidopsis thaliana GN=RPS24B PE=2
SV=2
Length = 133
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/133 (87%), Positives = 128/133 (96%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60
MA+KAVTIRTR FMTNRLL+RKQFVIDVLHPGRANVSKAELKEKLARMY+VKDPN+IF F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 61 KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIR 120
KFRTHFGGGKS+G+GLIYD+V++AKKFEPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKIR
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 121 GVKKTKASDAAKK 133
GVKKTKA D KK
Sbjct: 121 GVKKTKAGDTKKK 133
>sp|Q9SS17|RS241_ARATH 40S ribosomal protein S24-1 OS=Arabidopsis thaliana GN=RPS24A PE=2
SV=1
Length = 133
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/133 (92%), Positives = 131/133 (98%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60
MA+KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMY+VKDPN+IFVF
Sbjct: 1 MAEKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVF 60
Query: 61 KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIR 120
KFRTHFGGGKS+GFGLIYD+V+SAKKFEPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKIR
Sbjct: 61 KFRTHFGGGKSSGFGLIYDTVESAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 121 GVKKTKASDAAKK 133
GVKKTKA DA KK
Sbjct: 121 GVKKTKAGDAKKK 133
>sp|Q962Q6|RS24_SPOFR 40S ribosomal protein S24 OS=Spodoptera frugiperda GN=RpS24 PE=2
SV=1
Length = 132
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/133 (66%), Positives = 105/133 (78%), Gaps = 1/133 (0%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60
M + TIRTRKFMTNRLL+RKQ V DVLHPG+ VSK E++EKLA+MY V P+ +FVF
Sbjct: 1 MTEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVF 59
Query: 61 KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIR 120
F+T+FGGGKSTGF LIYD++D AKKFEPK+RL R+GL K +RKQ KERKNR KK+R
Sbjct: 60 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 119
Query: 121 GVKKTKASDAAKK 133
G KK+K AAKK
Sbjct: 120 GTKKSKVGAAAKK 132
>sp|Q90YQ0|RS24_ICTPU 40S ribosomal protein S24 OS=Ictalurus punctatus GN=rps24 PE=2 SV=1
Length = 131
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/129 (64%), Positives = 100/129 (77%), Gaps = 1/129 (0%)
Query: 5 AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRT 64
+VT+RTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY P+ +FVF F+T
Sbjct: 4 SVTLRTRKFMTNRLLQRKQMVLDVLHPGKATVPKTEIREKLAKMYKT-TPDVVFVFGFKT 62
Query: 65 HFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK 124
FGGGK+TGF ++YDS+D AKK EPKYRL R+GL K + SRKQ KERKNR KK+RG KK
Sbjct: 63 QFGGGKTTGFAMVYDSLDYAKKNEPKYRLARHGLYEKKKTSRKQRKERKNRMKKVRGTKK 122
Query: 125 TKASDAAKK 133
A KK
Sbjct: 123 ASVGAAGKK 131
>sp|O42387|RS24_TAKRU 40S ribosomal protein S24 OS=Takifugu rubripes GN=rps24 PE=3 SV=1
Length = 132
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/130 (65%), Positives = 101/130 (77%), Gaps = 3/130 (2%)
Query: 5 AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRT 64
VT+RTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY P+ +FVF FRT
Sbjct: 4 TVTVRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKT-TPDVVFVFGFRT 62
Query: 65 HFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK 124
FGGGK+TGF ++YDS+D AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 63 QFGGGKTTGFAMVYDSLDYAKKNEPKHRLARHGLFEKKKTSRKQRKERKNRMKKVRGTK- 121
Query: 125 TKASDAAKKK 134
KAS A KK
Sbjct: 122 -KASVGASKK 130
>sp|Q9W6X9|RS24_ORYLA 40S ribosomal protein S24 OS=Oryzias latipes GN=rps24 PE=2 SV=1
Length = 132
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/131 (61%), Positives = 98/131 (74%), Gaps = 1/131 (0%)
Query: 3 DKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKF 62
+ VTIRTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY P+ +FVF F
Sbjct: 2 NDTVTIRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKT-TPDVVFVFGF 60
Query: 63 RTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGV 122
RT FGGGK+TGF ++YDS+D AKK EPK+RL +GL K + SRKQ ER+NR KK+R +
Sbjct: 61 RTQFGGGKTTGFAMVYDSLDYAKKNEPKHRLATHGLYEKKKTSRKQRTERQNRMKKVRSI 120
Query: 123 KKTKASDAAKK 133
KK A KK
Sbjct: 121 KKASVGAAGKK 131
>sp|Q75K27|RS24_DICDI 40S ribosomal protein S24 OS=Dictyostelium discoideum GN=rps24 PE=3
SV=1
Length = 126
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/115 (65%), Positives = 95/115 (82%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60
M AV +RTRK +TNRLLSRKQFV++V+HPG+ANVSK +LK +A+++ V DP +IF+F
Sbjct: 1 MDKAAVVVRTRKVLTNRLLSRKQFVVEVVHPGKANVSKKDLKTTIAKLHKVADPETIFLF 60
Query: 61 KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNR 115
F+T FGGGKSTGFGLIYD+++ AKK+EPKYRL R GL TK + SRKQ KE+KNR
Sbjct: 61 GFKTDFGGGKSTGFGLIYDNLEIAKKYEPKYRLARAGLYTKPQTSRKQRKEKKNR 115
>sp|O59865|RS24B_SCHPO 40S ribosomal protein S24-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps24b PE=2 SV=3
Length = 134
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/133 (58%), Positives = 99/133 (74%), Gaps = 2/133 (1%)
Query: 3 DKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKF 62
+AVTIRTRKFMTNRLL RKQ V+D+LHPG+AN+SK E++EKLA+MY D + F
Sbjct: 2 SEAVTIRTRKFMTNRLLQRKQMVVDILHPGKANLSKNEIREKLAQMYKT-DSECVQAFGL 60
Query: 63 RTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEK-SRKQMKERKNRAKKIRG 121
RTHFGGG+STGF LIYDS +S KKFEP YRL+R G ++K +R+Q K+RKNR KK+ G
Sbjct: 61 RTHFGGGRSTGFALIYDSTESMKKFEPHYRLVRVGQAEPIQKVARQQRKQRKNRGKKVFG 120
Query: 122 VKKTKASDAAKKK 134
K A +K++
Sbjct: 121 TGKRLAKRKSKQQ 133
>sp|P0CX32|RS24B_YEAST 40S ribosomal protein S24-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS24B PE=1 SV=1
Length = 135
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 103/134 (76%), Gaps = 3/134 (2%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60
M+D AVTIRTRK ++N LL+RKQFV+DVLHP RANVSK EL+EKLA +Y + +++ VF
Sbjct: 1 MSD-AVTIRTRKVISNPLLARKQFVVDVLHPNRANVSKDELREKLAEVYKA-EKDAVSVF 58
Query: 61 KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEK-SRKQMKERKNRAKKI 119
FRT FGGGKS GFGL+Y+SV AKKFEP YRL+R GL KVEK SR+Q K++KNR KKI
Sbjct: 59 GFRTQFGGGKSVGFGLVYNSVAEAKKFEPTYRLVRYGLAEKVEKASRQQRKQKKNRDKKI 118
Query: 120 RGVKKTKASDAAKK 133
G K A A++
Sbjct: 119 FGTGKRLAKKVARR 132
>sp|P0CX31|RS24A_YEAST 40S ribosomal protein S24-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS24A PE=1 SV=1
Length = 135
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 103/134 (76%), Gaps = 3/134 (2%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60
M+D AVTIRTRK ++N LL+RKQFV+DVLHP RANVSK EL+EKLA +Y + +++ VF
Sbjct: 1 MSD-AVTIRTRKVISNPLLARKQFVVDVLHPNRANVSKDELREKLAEVYKA-EKDAVSVF 58
Query: 61 KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEK-SRKQMKERKNRAKKI 119
FRT FGGGKS GFGL+Y+SV AKKFEP YRL+R GL KVEK SR+Q K++KNR KKI
Sbjct: 59 GFRTQFGGGKSVGFGLVYNSVAEAKKFEPTYRLVRYGLAEKVEKASRQQRKQKKNRDKKI 118
Query: 120 RGVKKTKASDAAKK 133
G K A A++
Sbjct: 119 FGTGKRLAKKVARR 132
>sp|O13784|RS24A_SCHPO 40S ribosomal protein S24-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps24a PE=3 SV=3
Length = 134
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 100/132 (75%), Gaps = 2/132 (1%)
Query: 4 KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFR 63
+AVTIRTRKFMTNRLL RKQ V+D+LHPG+AN+SK +L+EKL +MY D +++ F R
Sbjct: 3 EAVTIRTRKFMTNRLLQRKQMVVDILHPGKANISKNDLREKLGQMYKT-DASAVQAFGLR 61
Query: 64 THFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEK-SRKQMKERKNRAKKIRGV 122
TH+GGG++TGF LIYD V++ KKFEP YRL+R G ++K +R+Q K+RKNR KK+ G
Sbjct: 62 THYGGGRTTGFALIYDDVEAMKKFEPHYRLVRVGHAEPIQKVARQQRKQRKNRGKKVFGT 121
Query: 123 KKTKASDAAKKK 134
K A +K++
Sbjct: 122 GKRLAKRKSKQQ 133
>sp|P14249|RS24_MUCCL 40S ribosomal protein S24 OS=Mucor circinelloides f. lusitanicus
GN=RPS24 PE=3 SV=1
Length = 148
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/125 (63%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
Query: 2 ADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFK 61
AD AVTIRTRKF+TNRLL RKQ V+DV+HPG ANVSK EL+ K+ +MY D + VF
Sbjct: 20 ADAAVTIRTRKFLTNRLLQRKQMVVDVIHPGLANVSKDELRSKIGKMYKA-DKEVVSVFG 78
Query: 62 FRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRG 121
F+THFGGGK+TGF LIYD+V++ K FEPK+RL+R GL + RKQ KE+KNR KK RG
Sbjct: 79 FKTHFGGGKTTGFALIYDNVEALKNFEPKHRLVRIGLAEAPKGGRKQRKEKKNREKKFRG 138
Query: 122 VKKTK 126
V+K+K
Sbjct: 139 VRKSK 143
>sp|Q5RAQ8|RS24_PONAB 40S ribosomal protein S24 OS=Pongo abelii GN=RPS24 PE=2 SV=1
Length = 131
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 99/129 (76%), Gaps = 1/129 (0%)
Query: 5 AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRT 64
VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRT
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRT 62
Query: 65 HFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK 124
HFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 63 HFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAK 122
Query: 125 TKASDAAKK 133
KK
Sbjct: 123 ANVGAGKKK 131
>sp|Q56JU9|RS24_BOVIN 40S ribosomal protein S24 OS=Bos taurus GN=RPS24 PE=2 SV=2
Length = 131
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 99/129 (76%), Gaps = 1/129 (0%)
Query: 5 AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRT 64
VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRT
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRT 62
Query: 65 HFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK 124
HFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 63 HFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAK 122
Query: 125 TKASDAAKK 133
KK
Sbjct: 123 ANVGAGKKK 131
>sp|P62850|RS24_RAT 40S ribosomal protein S24 OS=Rattus norvegicus GN=Rps24 PE=2 SV=1
Length = 133
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/130 (66%), Positives = 99/130 (76%), Gaps = 1/130 (0%)
Query: 5 AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRT 64
VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRT
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRT 62
Query: 65 HFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK 124
HFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 63 HFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAK 122
Query: 125 TKASDAAKKK 134
K K
Sbjct: 123 ANVGAGKKPK 132
>sp|P62849|RS24_MOUSE 40S ribosomal protein S24 OS=Mus musculus GN=Rps24 PE=1 SV=1
Length = 133
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/130 (66%), Positives = 99/130 (76%), Gaps = 1/130 (0%)
Query: 5 AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRT 64
VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRT
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRT 62
Query: 65 HFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK 124
HFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 63 HFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAK 122
Query: 125 TKASDAAKKK 134
K K
Sbjct: 123 ANVGAGKKPK 132
>sp|P62848|RS24_MESAU 40S ribosomal protein S24 OS=Mesocricetus auratus GN=RPS24 PE=3
SV=1
Length = 133
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/130 (66%), Positives = 99/130 (76%), Gaps = 1/130 (0%)
Query: 5 AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRT 64
VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRT
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRT 62
Query: 65 HFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK 124
HFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 63 HFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAK 122
Query: 125 TKASDAAKKK 134
K K
Sbjct: 123 ANVGAGKKPK 132
>sp|P62847|RS24_HUMAN 40S ribosomal protein S24 OS=Homo sapiens GN=RPS24 PE=1 SV=1
Length = 133
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/130 (66%), Positives = 99/130 (76%), Gaps = 1/130 (0%)
Query: 5 AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRT 64
VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRT
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRT 62
Query: 65 HFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK 124
HFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 63 HFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAK 122
Query: 125 TKASDAAKKK 134
K K
Sbjct: 123 ANVGAGKKPK 132
>sp|P02377|RS24_XENLA 40S ribosomal protein S24 OS=Xenopus laevis GN=rps24 PE=2 SV=1
Length = 132
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/129 (66%), Positives = 99/129 (76%), Gaps = 1/129 (0%)
Query: 5 AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRT 64
VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRT
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRT 62
Query: 65 HFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK 124
HFGGGK+TGFG+IYDS+D AKK EPK+RL ++GL K + SRKQ KERKNR KK+RG K
Sbjct: 63 HFGGGKTTGFGMIYDSLDYAKKNEPKHRLAKHGLYEKKKTSRKQRKERKNRMKKVRGTAK 122
Query: 125 TKASDAAKK 133
KK
Sbjct: 123 ANVGAGKKK 131
>sp|Q4R5H5|RS24_MACFA 40S ribosomal protein S24 OS=Macaca fascicularis GN=RPS24 PE=2 SV=1
Length = 131
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/129 (66%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Query: 5 AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRT 64
VTIRTRKFMTNRLL RKQ VI VLHPG+A V K E++EKLA+MY P+ IFVF FRT
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIGVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRT 62
Query: 65 HFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK 124
HFGGGK+TGFG+IYDS+D AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 63 HFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAK 122
Query: 125 TKASDAAKK 133
KK
Sbjct: 123 ANVGAGKKK 131
>sp|Q5JIY8|RS24_PYRKO 30S ribosomal protein S24e OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rps24e PE=3 SV=1
Length = 98
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 8 IRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFG 67
I+ + N+LL RK+ DVLH G S+ +K KL M D+ DPN+ + R++FG
Sbjct: 3 IKVTEIRENKLLGRKEIYFDVLHEGEPTPSREAVKGKLVAMLDL-DPNTTVIQYIRSYFG 61
Query: 68 GGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEK 104
S G+ Y++ + EP+Y L+R+GL K E+
Sbjct: 62 SNVSKGYAKAYETRERMLYIEPEYILVRDGLVQKQEE 98
>sp|C5A442|RS24_THEGJ 30S ribosomal protein S24e OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=rps24e PE=3 SV=1
Length = 98
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 6 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTH 65
+ I+ + N+LL RK+ D++H G S+ +K KLA M D+ DPN++ + R++
Sbjct: 1 MEIKVTEIRENKLLGRKEIYFDIIHEGEPTPSREAVKGKLAAMLDL-DPNTMVLQYIRSY 59
Query: 66 FGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEK 104
FG S G+ Y++ + EP+Y L+R+GL K E+
Sbjct: 60 FGSHVSKGYAKAYETRERMLYIEPEYILLRDGLIQKEEE 98
>sp|Q8U442|RS24_PYRFU 30S ribosomal protein S24e OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rps24e PE=1 SV=1
Length = 99
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 6 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTH 65
+ IR ++ N+L+ RK+ ++ HPG S+ ++K KL M D+ +P + + R++
Sbjct: 1 MEIRIKEIKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDL-NPETTVIQYIRSY 59
Query: 66 FGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVE 103
FG S G+ YDS + EP+Y LIR+GL K E
Sbjct: 60 FGSYISKGYAKAYDSKERMLYIEPEYILIRDGLIEKKE 97
>sp|B6YW35|RS24_THEON 30S ribosomal protein S24e OS=Thermococcus onnurineus (strain NA1)
GN=rps24e PE=3 SV=1
Length = 98
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 8 IRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFG 67
I+ + N+LL RK+ DV+H G S+ ++K KL M D+ DP + + +++FG
Sbjct: 3 IKVTEIKENKLLGRKEIYFDVIHEGEPTPSRKDVKGKLVAMLDL-DPETTVLQYIKSYFG 61
Query: 68 GGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEK 104
S G+ Y+S + EP+Y L+R+G+ TK E+
Sbjct: 62 SRVSKGYAKAYESKERMLYIEPEYILVRDGIITKEEE 98
>sp|Q9UY20|RS24_PYRAB 30S ribosomal protein S24e OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rps24e PE=1 SV=1
Length = 99
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 6 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTH 65
+ I+ + N+L+ RK+ ++ HPG S+ ++K KL M D+ +P + + R++
Sbjct: 1 MEIKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDL-NPETTVIQYIRSY 59
Query: 66 FGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVE 103
FG KS G+ Y D EP+Y LIR+G+ K E
Sbjct: 60 FGSYKSKGYAKYYYDKDRMLYIEPEYILIRDGIIEKKE 97
>sp|P58746|RS24_PYRHO 30S ribosomal protein S24e OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps24e PE=3 SV=1
Length = 99
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 6 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTH 65
+ I+ + N+L+ RK+ ++ HPG S+ ++K KL M D+ +P + + R++
Sbjct: 1 MEIKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDL-NPETTVIQYIRSY 59
Query: 66 FGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVE 103
FG KS G+ Y + EP+Y LIR+G+ K E
Sbjct: 60 FGSYKSKGYAKYYYDKERMLYIEPEYILIRDGIIEKKE 97
>sp|C6A0F5|RS24_THESM 30S ribosomal protein S24e OS=Thermococcus sibiricus (strain MM 739
/ DSM 12597) GN=rps24e PE=3 SV=1
Length = 98
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 8 IRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFG 67
IR N+LL RK+ +V+H G S+A++K KL M D+ +P + V R++FG
Sbjct: 3 IRVIDTKENKLLGRKEIYFEVIHEGEPTPSRADVKGKLVAMLDL-NPEATVVQYIRSYFG 61
Query: 68 GGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEK 104
S G+ Y+S + EP+Y L R G+ + E+
Sbjct: 62 SHVSEGYAKAYESKERMLYIEPEYVLRREGIIQEQEE 98
>sp|Q74M50|RS24_NANEQ 30S ribosomal protein S24e OS=Nanoarchaeum equitans (strain
Kin4-M) GN=rps24e PE=3 SV=1
Length = 94
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 16 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFG 75
N+L R +++I V HP ++ E KEK+A M +V D N + + K + +G S +
Sbjct: 12 NKLFDRTEYIIQVEHPKEKTPTREEAKEKIAEMLNV-DKNKLVIKKIVSKYGLPYSFIYA 70
Query: 76 LIYDSVDSAKKFEPKYRLIRNGL 98
+YD++D+AK+ E K L RN L
Sbjct: 71 RVYDNIDTAKRVELKQILRRNNL 93
>sp|A4WKS9|RS24_PYRAR 30S ribosomal protein S24e OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=rps24e PE=3 SV=1
Length = 121
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 16 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFG 75
N+LL+R++ +++V H ++ +L+E +A+ V D +S+F+ K +T +G GKS
Sbjct: 14 NKLLARREVLVEVSHHKAPTPTRKDLREWVAKQLGV-DVSSVFIRKIKTEYGIGKSVAEV 72
Query: 76 LIYDSVDSAKKFEPKYRLIRN 96
+Y A+ EP Y L RN
Sbjct: 73 HVYSDSKMARIIEPLYILARN 93
>sp|Q8ZV65|RS24_PYRAE 30S ribosomal protein S24e OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rps24e PE=3 SV=1
Length = 121
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 16 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFG 75
N+LL+R++ +++ +H + ++ ++E +A+ + D +++FV + +T FG G+S
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGI-DISNVFVRRIKTEFGRGRSLAEV 72
Query: 76 LIYDSVDSAKKFEPKYRLIRN 96
+Y+ A+ EP Y L RN
Sbjct: 73 HVYNDSKIARVIEPLYILARN 93
>sp|O26367|RS24_METTH 30S ribosomal protein S24e OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rps24e PE=3 SV=1
Length = 100
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 16 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFG 75
N LL+RK+ + L+ G + E+K KL M D D + + V K FG ++TG+
Sbjct: 11 NPLLNRKEIRFECLYEGESTPKVLEVKNKLVAMLDA-DKDLLVVDKIDQGFGEPRATGYA 69
Query: 76 LIYDSVDSAKKFEPKYRLIRN 96
IY+S + + EP++ + +N
Sbjct: 70 KIYESAEKLTEIEPEHVIKKN 90
>sp|Q18KI1|RS24_HALWD 30S ribosomal protein S24e OS=Haloquadratum walsbyi (strain DSM
16790) GN=rps24e PE=3 SV=1
Length = 105
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 16 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFG 75
N +L R ++ H A S+ +++ LA + KD + + V K T FG K+ G+
Sbjct: 11 NSMLHRTDIQFEIAHED-ATPSRLSVRDSLAAKIN-KDSDEVVVHKLDTKFGMRKTIGYA 68
Query: 76 LIYDSVDSAKKFEPKYRLIRNGLDTKVE 103
+YDS SA++ E Y L RN ++ + E
Sbjct: 69 KVYDSPQSARQVEQDYMLKRNKIEIESE 96
>sp|Q9YCY0|RS24_AERPE 30S ribosomal protein S24e OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rps24e
PE=3 SV=3
Length = 118
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 16 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFG 75
N L+ R++ V+ + H + + L++KLA + V D I++ +T +G G S
Sbjct: 28 NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGV-DIKRIYIRYIKTGYGAGLSKVRV 86
Query: 76 LIYDSVDSAKKFEPKYRLIRNG 97
+YDS + A FEPKY + RNG
Sbjct: 87 HVYDSPERALSFEPKYIIERNG 108
>sp|Q975Q9|RS24_SULTO 30S ribosomal protein S24e OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rps24e PE=3 SV=1
Length = 120
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60
+++KA I R + N ++ R++ I V H G +S+ ++ + +A Y ++ + + +
Sbjct: 11 ISEKAEGIVERD-IKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQE-DLVVIK 68
Query: 61 KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRN 96
K T +G G S IY+ + ++FEP+Y + R+
Sbjct: 69 KIHTLYGAGISYVRANIYNDKKTLQEFEPQYLIGRD 104
>sp|Q8TVD8|RS24_METKA 30S ribosomal protein S24e OS=Methanopyrus kandleri (strain AV19
/ DSM 6324 / JCM 9639 / NBRC 100938) GN=rps24e PE=3
SV=1
Length = 116
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 16 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFG 75
N LL RK+ V H K+E+ KLA + DV D + + + + FG ++ G+
Sbjct: 11 NPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDV-DKEVVLIDRMESEFGKRETKGYA 69
Query: 76 LIYDSVDSAKKFEPKYRLIRN 96
IY S++ + EP++ + R+
Sbjct: 70 KIYKSMEHLEDIEPEHMVERH 90
>sp|C4KIA8|RS24_SULIK 30S ribosomal protein S24e OS=Sulfolobus islandicus (strain M.16.4
/ Kamchatka #3) GN=rps24e PE=3 SV=1
Length = 120
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60
++DKA I R + N ++ R++ ++ V H G S+ ++ + +++ + ++ N + V
Sbjct: 9 ISDKAEGIIERD-VQNAVIGRREILLKVYHMGSGTPSRKDIIKAISQAFASQE-NLVVVR 66
Query: 61 KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNG 97
K T +G G S IY S + +K EPKY L R+
Sbjct: 67 KISTSYGAGISNVKLHIYKSREILEKIEPKYLLDRDA 103
>sp|A4YIV8|RS24_METS5 30S ribosomal protein S24e OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=rps24e PE=3 SV=1
Length = 113
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60
++DKA + N+++ RK+ I V H G S+A++++ ++ K+ + + +
Sbjct: 9 VSDKAEAL-VENLKENKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKE-DLVVIR 66
Query: 61 KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIR 95
K T +G G S +Y D KFEP + + R
Sbjct: 67 KINTGYGAGISEATIHVYSEKDVLSKFEPAHLVNR 101
>sp|Q6L0P8|RS24_PICTO 30S ribosomal protein S24e OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rps24e
PE=3 SV=1
Length = 102
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 16 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFG 75
N+LL RK+ + S+ ++++ LA Y D + I V K R G + G+
Sbjct: 14 NKLLFRKEINYTIKFENDKTPSREDIRKLLANNYG-SDESLIIVDKNRQETGKHEIKGYA 72
Query: 76 LIYDSVDSAKKFEPKYRLIRNGLDTK 101
IYD+ + A +EP Y L RN L K
Sbjct: 73 KIYDTKEHAMLYEPDYELFRNKLKVK 98
>sp|Q4JAF9|RS24_SULAC 30S ribosomal protein S24e OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rps24e PE=3 SV=1
Length = 118
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60
++DK I R + N + +R++ I + H G S+ EL + +A + + + + V
Sbjct: 9 VSDKVEGIVERD-IQNNVANRRELYIKLFHIGSGTPSRKELVKAIASTFSTAE-DLVVVK 66
Query: 61 KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRN 96
K T++G G S +Y DS +K EP+Y + R+
Sbjct: 67 KVFTNYGSGISYARVNVYKDKDSLQKLEPQYLIGRD 102
>sp|B9LSM1|RS24_HALLT 30S ribosomal protein S24e OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rps24e PE=3
SV=1
Length = 102
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 16 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFG 75
N +L R + H A S+ +++ LA D K + V + T FG K+ G+
Sbjct: 11 NPMLHRTDIRFETTHE-EATPSRLSVRDSLAAKLD-KASEEVVVHELDTKFGMRKTIGYA 68
Query: 76 LIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQ 108
+YD+ + A E +Y L RN + +VE ++
Sbjct: 69 KVYDTAEDALDVEQEYMLERNKIGGEVEADAEE 101
>sp|Q97ZY6|RS24_SULSO 30S ribosomal protein S24e OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rps24e PE=3 SV=1
Length = 120
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60
++DKA I R M N ++ R++ + V H G S+ ++ + + + ++ N + V
Sbjct: 9 ISDKAEGIIERD-MQNSVIGRREISLKVYHMGSGTPSRKDIIKAIIQALGSQE-NLVVVR 66
Query: 61 KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNG 97
K T +G G S IY S + +K EPKY L R+
Sbjct: 67 KISTSYGAGISNVKLHIYKSREILEKVEPKYLLDRDA 103
>sp|P19953|RS24_HALMA 30S ribosomal protein S24e OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rps24e
PE=1 SV=1
Length = 102
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 16 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFG 75
N +L R +V+H A S+ +++ LA + KD + + K T FG K+ G+
Sbjct: 11 NPMLHRTDVRFEVVH-DEATPSRLSVRDSLAATLN-KDAEEVVIHKLDTKFGMRKTVGYA 68
Query: 76 LIYDSVDSAKKFEPKYRLIRN 96
+YD+ + A+ E + L RN
Sbjct: 69 KVYDNPEYARDVEQDHMLERN 89
>sp|Q8PZ95|RS24_METMA 30S ribosomal protein S24e OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rps24e PE=1 SV=1
Length = 101
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 16 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFK-FRTHFGGGKSTGF 74
N LL+R++ V + G + S+ +++ KLA M + P + V + +T +G +S G+
Sbjct: 11 NPLLNRRELDFIVKYEG-STPSRNDVRNKLAAMLNA--PLELLVIQRIKTEYGMQESKGY 67
Query: 75 GLIYDSVDSAKKFEPKYRLIRNGL 98
+Y+ D K+ E +Y L RN +
Sbjct: 68 AKLYEDADRMKQVEQEYVLKRNAV 91
>sp|C3MWX0|RS24_SULIM 30S ribosomal protein S24e OS=Sulfolobus islandicus (strain M.14.25
/ Kamchatka #1) GN=rps24e PE=3 SV=1
Length = 120
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60
++DKA I R + N ++ R++ + V H G S+ ++ + + + + ++ N + V
Sbjct: 9 ISDKAEGIIERD-VQNAVIGRREISLKVYHMGSGTPSRKDIIKAIIQAFASQE-NLVVVR 66
Query: 61 KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNG 97
K T +G G S IY S + +K EPKY L R+
Sbjct: 67 KISTSYGAGISNVKLHIYKSREILEKIEPKYLLDRDA 103
>sp|C3N6N7|RS24_SULIA 30S ribosomal protein S24e OS=Sulfolobus islandicus (strain
M.16.27) GN=rps24e PE=3 SV=1
Length = 120
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60
++DKA I R + N ++ R++ + V H G S+ ++ + + + + ++ N + V
Sbjct: 9 ISDKAEGIIERD-VQNAVIGRREISLKVYHMGSGTPSRKDIIKAIIQAFASQE-NLVVVR 66
Query: 61 KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNG 97
K T +G G S IY S + +K EPKY L R+
Sbjct: 67 KISTSYGAGISNVKLHIYKSREILEKIEPKYLLDRDA 103
>sp|C3N750|RS24_SULIY 30S ribosomal protein S24e OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=rps24e PE=3 SV=1
Length = 120
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60
++DKA I R + N ++ R++ + V H G S+ ++ + + + + ++ N + V
Sbjct: 9 ISDKAEGIIERD-VQNAVIGRREISLKVYHMGSGTPSRKDIIKAIIQAFASQE-NLVVVR 66
Query: 61 KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNG 97
K T +G G S IY S + +K EPKY L R+
Sbjct: 67 KISTSYGAGISNIKLHIYKSREILEKIEPKYLLDRDA 103
>sp|C3NGI5|RS24_SULIN 30S ribosomal protein S24e OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=rps24e PE=3 SV=1
Length = 120
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60
++DKA I R + N ++ R++ + V H G S+ ++ + + + + ++ N + V
Sbjct: 9 ISDKAEGIIERD-VQNAVIGRREISLKVYHMGSGTPSRKDIIKAIIQAFASQE-NLVVVR 66
Query: 61 KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNG 97
K T +G G S IY S + +K EPKY L R+
Sbjct: 67 KISTSYGAGISNIKLHIYKSREILEKIEPKYLLDRDA 103
>sp|C3MQY2|RS24_SULIL 30S ribosomal protein S24e OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=rps24e PE=3 SV=1
Length = 120
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60
++DKA I R + N ++ R++ + V H G S+ ++ + + + + ++ N + V
Sbjct: 9 ISDKAEGIIERD-VQNAVIGRREISLKVYHMGSGTPSRKDIIKAIIQAFASQE-NLVVVR 66
Query: 61 KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNG 97
K T +G G S IY S + +K EPKY L R+
Sbjct: 67 KISTSYGAGISNIKLHIYKSREILEKIEPKYLLDRDA 103
>sp|A0B8S8|RS24_METTP 30S ribosomal protein S24e OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rps24e PE=3 SV=1
Length = 99
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 16 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFG 75
N LL R++ V+ V+H ++ + E+LA + D K P + V K + FG +S
Sbjct: 11 NPLLKRREIVLKVIHGEGPTPTRKSVVERLAAIKDSK-PGLVVVRKMNSLFGRRESIAHA 69
Query: 76 LIYDSVDSAKKFEPKYRLIRNGLDTKVEKS 105
IY+S + ++ E + + RN + E S
Sbjct: 70 RIYESEERMRQVENPHIVKRNVFTEQKEAS 99
>sp|Q97BH3|RS24_THEVO 30S ribosomal protein S24e OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=rps2e PE=3 SV=1
Length = 99
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 16 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFG 75
N +L RK+ + S+ E+KE +A+ ++ I V + G + G+
Sbjct: 12 NPILKRKELKYTLKFENARTPSREEIKEIIAK-HEGAQKELIIVESNKQLTGKHEIVGYT 70
Query: 76 LIYDSVDSAKKFEPKYRLIRNGLDTK 101
IY SA +EP Y LIRNGL K
Sbjct: 71 KIYQDKASAMLYEPDYELIRNGLKQK 96
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,687,389
Number of Sequences: 539616
Number of extensions: 1761362
Number of successful extensions: 7675
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 7570
Number of HSP's gapped (non-prelim): 116
length of query: 134
length of database: 191,569,459
effective HSP length: 100
effective length of query: 34
effective length of database: 137,607,859
effective search space: 4678667206
effective search space used: 4678667206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)