BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 032762
         (134 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P23137|GRP1_TOBAC Glycine-rich protein OS=Nicotiana tabacum GN=GRP PE=2 SV=1
          Length = 109

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/135 (48%), Positives = 75/135 (55%), Gaps = 27/135 (20%)

Query: 1   MGSKVFLMLGLLVSIVLLISSEAAARDLAETSNDDQKNGEVAGETNGVDDAKYNGGYGGY 60
           MGSK FL LGL ++   LISSE  A +LAETSN  + +GE     NGVD           
Sbjct: 1   MGSKAFLFLGLCLAFFFLISSEVVAGELAETSNPMKLDGE-----NGVD----------- 44

Query: 61  PGGGRGGYGGYPGGGRGGYGGYPGRGGYGGGGRGHGGGYCRYGCCGRGYYGRGC-RCCSY 119
              GRGGY    G G  G       GG G GG G+    CRYGCC +GY   GC RCCSY
Sbjct: 45  -VDGRGGYNDVGGDGYYG-------GGRGRGGGGYKRRGCRYGCCRKGY--NGCKRCCSY 94

Query: 120 AGEAVNAQTEAEPQN 134
           AGEA++  TEA+P N
Sbjct: 95  AGEAMDKVTEAQPHN 109


>sp|P37704|GRP7_DAUCA Glycine-rich protein DC7.1 OS=Daucus carota PE=2 SV=1
          Length = 96

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 29/34 (85%)

Query: 1  MGSKVFLMLGLLVSIVLLISSEAAARDLAETSND 34
          MGSK+FL+LGL ++  LLISSE AARDL+ET+ +
Sbjct: 1  MGSKIFLLLGLSIAFALLISSEVAARDLSETTTE 34


>sp|P37703|GRP9_DAUCA Glycine-rich protein DC9.1 OS=Daucus carota PE=2 SV=1
          Length = 144

 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 29/36 (80%)

Query: 1  MGSKVFLMLGLLVSIVLLISSEAAARDLAETSNDDQ 36
          MGSK+FL+LGL ++  +LISSE AAR+LAET+   +
Sbjct: 1  MGSKIFLLLGLSIAFAILISSEVAARELAETAAKTE 36


>sp|P11898|GRP1_CHERU Glycine-rich protein HC1 OS=Chenopodium rubrum PE=2 SV=1
          Length = 144

 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 29/36 (80%)

Query: 1  MGSKVFLMLGLLVSIVLLISSEAAARDLAETSNDDQ 36
          MGSK+FL+LGL ++  +LISSE AAR+LAET+   +
Sbjct: 1  MGSKIFLLLGLSIAFAILISSEVAARELAETAAKTE 36


>sp|Q09134|GRPA_MEDFA Abscisic acid and environmental stress-inducible protein
          OS=Medicago falcata PE=2 SV=1
          Length = 159

 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/39 (61%), Positives = 31/39 (79%), Gaps = 2/39 (5%)

Query: 15 IVLLISSEAAARDLAETSNDDQKNGEVAGETNGVDDAKY 53
          +VLLISSE +ARDL ET++D +K  EV  +TN V+DAKY
Sbjct: 1  MVLLISSEVSARDLTETTSDAKK--EVVEKTNEVNDAKY 37


>sp|Q9ZSJ6|GRP3S_ARATH Glycine-rich protein 3 short isoform OS=Arabidopsis thaliana
           GN=GRP3S PE=1 SV=2
          Length = 116

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/31 (64%), Positives = 24/31 (77%), Gaps = 1/31 (3%)

Query: 98  GYCRYGCCGRGYYGRGCRCCSYAGEAVNAQT 128
            YCR+GCC +GY+G   RCCSYAGEAV  Q+
Sbjct: 85  SYCRHGCCYKGYHGCS-RCCSYAGEAVQTQS 114


>sp|Q9SL15|GRP3_ARATH Glycine-rich protein 3 OS=Arabidopsis thaliana GN=GRP3 PE=1 SV=1
          Length = 145

 Score = 39.7 bits (91), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 21/28 (75%), Gaps = 1/28 (3%)

Query: 100 CRYGCCGRGYYGRGCRCCSYAGEAVNAQ 127
           CR+GCC RGY G   RCCSYAGEAV  Q
Sbjct: 116 CRHGCCYRGYNGCS-RCCSYAGEAVQTQ 142


>sp|Q07202|CORA_MEDSA Cold and drought-regulated protein CORA OS=Medicago sativa
          GN=CORA PE=2 SV=1
          Length = 204

 Score = 34.7 bits (78), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 2/35 (5%)

Query: 19 ISSEAAARDLAETSNDDQKNGEVAGETNGVDDAKY 53
          ISS  +ARDL ETS D +K  EV  +TN V+DAKY
Sbjct: 18 ISSVMSARDLTETSTDAKK--EVVEKTNEVNDAKY 50


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.145    0.467 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,556,768
Number of Sequences: 539616
Number of extensions: 4973914
Number of successful extensions: 87594
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1688
Number of HSP's successfully gapped in prelim test: 866
Number of HSP's that attempted gapping in prelim test: 18844
Number of HSP's gapped (non-prelim): 23211
length of query: 134
length of database: 191,569,459
effective HSP length: 100
effective length of query: 34
effective length of database: 137,607,859
effective search space: 4678667206
effective search space used: 4678667206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)