BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032763
(134 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SW09|RS101_ARATH 40S ribosomal protein S10-1 OS=Arabidopsis thaliana GN=RPS10A PE=2
SV=1
Length = 177
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/135 (85%), Positives = 123/135 (91%), Gaps = 4/135 (2%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAGRPMGGP 60
MQSFKS+EYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKKSAKP GRP GGP
Sbjct: 46 MQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGP 105
Query: 61 GGDRPRGPPRFDGDRPRFGDREGYRGGPRGGDFGGEKGGAPADFQPSFRGSGGRPGFGRG 120
GDR RGPPR DGDRPRFGDR+GYRGGPRGGD EKGGAPADFQPSF+G GGRPGFGRG
Sbjct: 106 PGDRQRGPPRSDGDRPRFGDRDGYRGGPRGGD---EKGGAPADFQPSFQGGGGRPGFGRG 162
Query: 121 GGGY-GAAPSGSGFP 134
GGY AAPSGSGFP
Sbjct: 163 AGGYSAAAPSGSGFP 177
>sp|Q9AYP4|RS10_ORYSJ 40S ribosomal protein S10 OS=Oryza sativa subsp. japonica GN=RPS10
PE=2 SV=2
Length = 183
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/114 (84%), Positives = 103/114 (90%), Gaps = 3/114 (2%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAGRPMGG- 59
MQSFKS+EYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKKSA+P GRP G
Sbjct: 46 MQSFKSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSG 105
Query: 60 PGGDRPRGPPRFDGDRPRFGDREGYRGGPRG--GDFGGEKGGAPADFQPSFRGS 111
P GDRPRGPPRF+GDRPRFGDR+GYRGGPRG GDFGGEKGGAPA+FQPSFR S
Sbjct: 106 PPGDRPRGPPRFEGDRPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSS 159
>sp|Q9LTF2|RS103_ARATH 40S ribosomal protein S10-3 OS=Arabidopsis thaliana GN=RPS10C PE=2
SV=2
Length = 179
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/135 (77%), Positives = 114/135 (84%), Gaps = 2/135 (1%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAGRPMGGP 60
MQSFKS+EYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKKSAKP GRP GGP
Sbjct: 46 MQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGP 105
Query: 61 GGDRPRGPPRFDGDRPRFGDREGYRGGPRG-GDFGGEKGGAPADFQPSFRGSGGRPGFGR 119
GDR RGP GDRPRFGDR+GYR GPR G+FGGEKGGAPAD+QPSF+GSG G G
Sbjct: 106 PGDRSRGPRHEGGDRPRFGDRDGYRAGPRAGGEFGGEKGGAPADYQPSFQGSGRGFGRGA 165
Query: 120 GGGGYGAAPSGSGFP 134
GG AAPSGSG P
Sbjct: 166 GGYS-AAAPSGSGLP 179
>sp|Q9FFS8|RS102_ARATH 40S ribosomal protein S10-2 OS=Arabidopsis thaliana GN=RPS10B PE=2
SV=1
Length = 180
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/106 (69%), Positives = 82/106 (77%), Gaps = 2/106 (1%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAGRPMGGP 60
MQSFKS+EYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKK KP GRP GG
Sbjct: 47 MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGGG 106
Query: 61 GGDRPRGPPRFDGDRPRFGDREGYRGGPRGGDFGGEKGGAPADFQP 106
G P RFGDR+GYRGGP+ G G+K GAPAD+QP
Sbjct: 107 GDRPRGPPRG--DGERRFGDRDGYRGGPKSGGEYGDKAGAPADYQP 150
>sp|P63326|RS10_RAT 40S ribosomal protein S10 OS=Rattus norvegicus GN=Rps10 PE=2 SV=1
Length = 165
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 68/106 (64%), Gaps = 17/106 (16%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAGRPMGGP 60
MQS KSR YV+E FAW H+YWYLTN+GI++LR YL+LP EIVPATL++S GRP
Sbjct: 49 MQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRP---- 104
Query: 61 GGDRPRGPPRFDGDRP-RF----GDREGYR--GGPRGGDFGGEKGG 99
RP+GP +G+RP RF DR+ YR P G D E G
Sbjct: 105 ---RPKGP---EGERPARFTRGEADRDTYRRSAVPPGADKKAEAGA 144
>sp|P63325|RS10_MOUSE 40S ribosomal protein S10 OS=Mus musculus GN=Rps10 PE=1 SV=1
Length = 165
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 68/106 (64%), Gaps = 17/106 (16%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAGRPMGGP 60
MQS KSR YV+E FAW H+YWYLTN+GI++LR YL+LP EIVPATL++S GRP
Sbjct: 49 MQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRP---- 104
Query: 61 GGDRPRGPPRFDGDRP-RF----GDREGYR--GGPRGGDFGGEKGG 99
RP+GP +G+RP RF DR+ YR P G D E G
Sbjct: 105 ---RPKGP---EGERPARFTRGEADRDTYRRSAVPPGADKKAEAGA 144
>sp|P46783|RS10_HUMAN 40S ribosomal protein S10 OS=Homo sapiens GN=RPS10 PE=1 SV=1
Length = 165
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 66/106 (62%), Gaps = 17/106 (16%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAGRPMGGP 60
MQS KSR YV+E FAW H+YWYLTN+GI++LR YL+LP EIVPATL++S GRP
Sbjct: 49 MQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRP---- 104
Query: 61 GGDRPRGPPRFDGDRP-RF----GDREGYR--GGPRGGDFGGEKGG 99
RP+G +G+RP R DR+ YR P G D E G
Sbjct: 105 ---RPKG---LEGERPARLTRGEADRDTYRRSAVPPGADKKAEAGA 144
>sp|Q3T0F4|RS10_BOVIN 40S ribosomal protein S10 OS=Bos taurus GN=RPS10 PE=2 SV=1
Length = 165
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 66/106 (62%), Gaps = 17/106 (16%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAGRPMGGP 60
MQS KSR YV+E FAW H+YWYLTN+GI++LR YL+LP EIVPATL++S GRP
Sbjct: 49 MQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRP---- 104
Query: 61 GGDRPRGPPRFDGDRP-RF----GDREGYR--GGPRGGDFGGEKGG 99
RP+G +G+RP R DR+ YR P G D E G
Sbjct: 105 ---RPKG---LEGERPARLTRGEADRDTYRRSAVPPGADKKAEAGA 144
>sp|Q962R9|RS10_SPOFR 40S ribosomal protein S10 OS=Spodoptera frugiperda GN=RpS10 PE=2
SV=1
Length = 158
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 69/123 (56%), Gaps = 18/123 (14%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAGRPMGGP 60
MQS KSR YV+E FAW H+YWYLTN+GIE+LR +L+LP EIVPATLK+S + G
Sbjct: 47 MQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRAETVRRGAV 106
Query: 61 GGDRPRGPPRFDGDRPRFGDREGYRGGPR---GGDFGGEKGGAPADFQPSFRGSGGRPGF 117
G RP P R DR YR P D + G AD + FRG GF
Sbjct: 107 G--RPDAPAR------SAEDRSAYRRAPTTPAAHDKKADVGPGSADLE--FRG-----GF 151
Query: 118 GRG 120
GRG
Sbjct: 152 GRG 154
>sp|O77302|RS10_LUMRU 40S ribosomal protein S10 OS=Lumbricus rubellus GN=RPS10 PE=2 SV=1
Length = 156
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 73/122 (59%), Gaps = 19/122 (15%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAGRPMGGP 60
MQS SR YV+E F W HYYWYL N+GI++LR +L+LP EIVPATLK+ +P
Sbjct: 46 MQSLVSRGYVKEQFCWRHYYWYLQNEGIQYLRDFLHLPPEIVPATLKRQTRPE------- 98
Query: 61 GGDRPRGPPRFDGDRPRFG-DREGYRGGPRGGDFGGEKG-GAPADFQPSFRGSGGRPGFG 118
RPR P+ R + G DR GYR G G D GE G GA +FQ FRG GFG
Sbjct: 99 -AARPR--PKEGAPRAQVGEDRAGYRRGFGGSDKKGEAGAGADTNFQ--FRG-----GFG 148
Query: 119 RG 120
RG
Sbjct: 149 RG 150
>sp|Q9VWG3|RS10B_DROME 40S ribosomal protein S10b OS=Drosophila melanogaster GN=RpS10b
PE=1 SV=2
Length = 160
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 71/122 (58%), Gaps = 13/122 (10%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAK-PAGRPMGG 59
MQS SR V+E FAW HYYWYLTN+GIE LR+YL+LP EIVP+TLK+ A+ RP
Sbjct: 47 MQSLHSRGLVKEQFAWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPA 106
Query: 60 PGGDRPRGPPRFDGDRPRFG-DREGYRGGPRGGDFGGEKGGAPADFQPSFRGSGGRPGFG 118
GG PRGP GD + G DR YR P G + P + FRG GFG
Sbjct: 107 VGG--PRGP----GDASKTGEDRSAYRRAPGGSGVDKKGDVGPGAGEVEFRG-----GFG 155
Query: 119 RG 120
RG
Sbjct: 156 RG 157
>sp|Q07254|RS10_XENLA 40S ribosomal protein S10 OS=Xenopus laevis GN=rps10 PE=1 SV=1
Length = 165
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAGRPM-GG 59
MQS KSR YV+E FAW H+YWYLTN+GI++LR +L+LP EIVPATL++S GRP G
Sbjct: 49 MQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRSRPETGRPRPKG 108
Query: 60 PGGDRPRGPPRFDGDR 75
G+RP PR + DR
Sbjct: 109 LEGERPPRLPRGETDR 124
>sp|P30427|PLEC_RAT Plectin OS=Rattus norvegicus GN=Plec PE=1 SV=2
Length = 4687
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/131 (40%), Positives = 69/131 (52%), Gaps = 24/131 (18%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAG------ 54
M S K+R VRETFAW H+YWYLTN+GI+ LR YL+LP EIVPA+L++ +P
Sbjct: 52 MTSLKARGLVRETFAWCHFYWYLTNEGIDHLRQYLHLPPEIVPASLQRVRRPVAMVMPAR 111
Query: 55 ------RPMGGPGGDRP-RGPPRFDGDRPRFGDREGYRGGPRGGDFGGEKGGAPAD--FQ 105
+ M GP G P RGP + P +R+ YR R + GAP
Sbjct: 112 RRSPHVQTMQGPLGCPPKRGP--LPAEDPAREERQVYRRKER-------EEGAPETPVVS 162
Query: 106 PSFRGSGGRPG 116
+ G+ RPG
Sbjct: 163 ATIVGTLARPG 173
>sp|Q9QXS1|PLEC_MOUSE Plectin OS=Mus musculus GN=Plec PE=1 SV=2
Length = 4691
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 53/131 (40%), Positives = 69/131 (52%), Gaps = 24/131 (18%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAG------ 54
M S K+R VRETFAW H+YWYLTN+GI+ LR YL+LP EIVPA+L++ +P
Sbjct: 52 MASLKARGLVRETFAWCHFYWYLTNEGIDHLRQYLHLPPEIVPASLQRVRRPVAMVIPAR 111
Query: 55 ------RPMGGPGGDRP-RGPPRFDGDRPRFGDREGYRGGPRGGDFGGEKGGAPAD--FQ 105
+ M GP G P RGP + P +R+ YR R + GAP
Sbjct: 112 RRSPHVQTMQGPLGCPPKRGP--LPAEDPAREERQVYRRKER-------EEGAPETPVVS 162
Query: 106 PSFRGSGGRPG 116
+ G+ RPG
Sbjct: 163 ATTVGTLARPG 173
>sp|Q90YR4|RS10_ICTPU 40S ribosomal protein S10 OS=Ictalurus punctatus GN=rps10 PE=2 SV=1
Length = 166
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 64/100 (64%), Gaps = 18/100 (18%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP-AGRPMGG 59
MQS KS YV+E FAW H+YWYLTN+GI++LR +L+LP EIVPATL++ +P RP
Sbjct: 49 MQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRPETARP--- 105
Query: 60 PGGDRPRGPPRFDGDRP-RF----GDREGYR--GGPRGGD 92
RP+G +G+RP R GDR+ YR P G D
Sbjct: 106 ----RPKG---LEGERPARLARGEGDRDAYRRSAAPPGAD 138
>sp|Q9NQ39|RS10L_HUMAN Putative 40S ribosomal protein S10-like OS=Homo sapiens GN=RPS10P5
PE=5 SV=1
Length = 176
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 65/115 (56%), Gaps = 11/115 (9%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKK--SAKPAGRPMG 58
MQS KSR V+E FAW H+YWYLTN+G ++LR YL+LP EIVPATL PA
Sbjct: 49 MQSLKSRGCVKEQFAWRHFYWYLTNEGSQYLRDYLHLPPEIVPATLHLPPEIVPATLHRS 108
Query: 59 GPGGDRPRGPPRFDGDRP-----RFGDREGYR--GGPRGGDFGGEKG-GAPADFQ 105
P RPR P +G RP R DR+ YR P G D E G G+ +FQ
Sbjct: 109 RPETGRPR-PKGLEGKRPARLTRREADRDTYRRCSVPPGADKKAEAGAGSATEFQ 162
>sp|Q15149|PLEC_HUMAN Plectin OS=Homo sapiens GN=PLEC PE=1 SV=3
Length = 4684
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 12/80 (15%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAGRPM--- 57
M S ++R VRETFAW H+YWYLTN+GI LR YL+LP EIVPA+L++ +P M
Sbjct: 52 MASLRARGLVRETFAWCHFYWYLTNEGIAHLRQYLHLPPEIVPASLQRVRRPVAMVMPAR 111
Query: 58 --------GGPGGDRP-RGP 68
GP G P RGP
Sbjct: 112 RTPHVQAVQGPLGSPPKRGP 131
>sp|O77082|RS10_DICDI 40S ribosomal protein S10 OS=Dictyostelium discoideum GN=rps10
PE=1 SV=3
Length = 154
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 41/50 (82%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSA 50
++SFKSR++V ETF W +YYW LT +GI++LRTYL +P +VPAT+KK A
Sbjct: 48 LRSFKSRKFVTETFNWQYYYWVLTEEGIKYLRTYLQVPESVVPATMKKQA 97
>sp|O13614|RS10B_SCHPO 40S ribosomal protein S10-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps10b PE=3 SV=1
Length = 147
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 64/115 (55%), Gaps = 16/115 (13%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAGRPMGGP 60
QS SR Y++ + W +Y+ LTN+G+E+LR YL+LP+E+VPAT K+ +PA P
Sbjct: 46 CQSLDSRGYLKTRYNWGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVRPA-----AP 100
Query: 61 GGDRPRGPPRFDGDRPRFGDREGYRGGPRGGDFGGEKGGAPADFQPSFRGSGGRP 115
RP PR +R D GYR + D G AP F PSFRG GRP
Sbjct: 101 RAGRPE--PR---ERSSAAD-AGYRRAEKKDD-----GAAPGGFAPSFRGGFGRP 144
>sp|O14112|RS10A_SCHPO 40S ribosomal protein S10-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps10a PE=3 SV=1
Length = 144
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 62/115 (53%), Gaps = 17/115 (14%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAGRPMGGP 60
QS SR Y++ + W +Y+ LTN+G+E+LR YL+LP+E+VPAT K+ +P P
Sbjct: 46 CQSLDSRGYLKTRYNWGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVRPT-----AP 100
Query: 61 GGDRPRGPPRFDGDRPRFGDREGYRGGPRGGDFGGEKGGAPADFQPSFRGSGGRP 115
RP R D GYR + ++G AP+ F PSFRG GRP
Sbjct: 101 RAGRPEPRERASAD-------AGYRRAEK-----KDEGAAPSGFAPSFRGGFGRP 143
>sp|Q9VB14|RS10A_DROME 40S ribosomal protein S10a OS=Drosophila melanogaster GN=RpS10a
PE=2 SV=1
Length = 163
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAK 51
MQS SR +V+E FAW H+YW LTN+GIE LR YL+LP EIVP+TL ++ +
Sbjct: 47 MQSLNSRGWVKEQFAWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTR 97
>sp|P46784|RS10B_YEAST 40S ribosomal protein S10-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS10B PE=1 SV=1
Length = 105
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAGRP 56
+QS S+ YV+ F+W +YY+ LT +G+E+LR YLNLP IVP T + P+ RP
Sbjct: 46 LQSLTSKGYVKTQFSWQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQERNPSQRP 101
>sp|Q08745|RS10A_YEAST 40S ribosomal protein S10-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS10A PE=1 SV=1
Length = 105
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 1 MQSFKSREYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPAGRP 56
+QS S+ YV+ F+W +YY+ LT +G+E+LR YLNLP IVP T + P RP
Sbjct: 46 LQSLTSKGYVKTQFSWQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQERNPTQRP 101
>sp|Q9AC25|IF2_CAUCR Translation initiation factor IF-2 OS=Caulobacter crescentus
(strain ATCC 19089 / CB15) GN=infB PE=3 SV=2
Length = 1009
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 60 PGGDRPRGPPRFDGDRPRFGDREGYRGGPRGGD 92
P GDRPRG PR DGDRP+ GDR GYRG GD
Sbjct: 253 PEGDRPRG-PRPDGDRPQ-GDRGGYRGDRPQGD 283
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.146 0.482
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,287,796
Number of Sequences: 539616
Number of extensions: 4583710
Number of successful extensions: 38267
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 1095
Number of HSP's that attempted gapping in prelim test: 16603
Number of HSP's gapped (non-prelim): 11720
length of query: 134
length of database: 191,569,459
effective HSP length: 100
effective length of query: 34
effective length of database: 137,607,859
effective search space: 4678667206
effective search space used: 4678667206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)