Query 032766
Match_columns 134
No_of_seqs 118 out of 840
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 08:50:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032766.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032766hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3by4_A OTU1, ubiquitin thioest 100.0 5.8E-32 2E-36 209.0 8.0 124 1-128 52-179 (212)
2 3pfy_A OTU domain-containing p 99.9 2.9E-27 9.9E-32 179.5 5.9 91 1-93 92-183 (185)
3 3phu_A RNA-directed RNA polyme 99.9 1.8E-25 6.3E-30 173.5 8.6 112 1-116 70-184 (219)
4 3phx_A RNA-directed RNA polyme 99.9 1.8E-25 6E-30 169.6 7.1 104 1-108 70-176 (185)
5 1tff_A Ubiquitin thiolesterase 99.9 2E-23 6.8E-28 163.3 7.6 92 1-93 138-232 (234)
6 2zfy_A Ubiquitin thioesterase 99.9 4.1E-23 1.4E-27 161.4 8.4 90 1-91 141-234 (234)
7 4dhi_B Ubiquitin thioesterase 99.8 9.7E-21 3.3E-25 151.6 7.7 92 1-93 176-275 (284)
8 4ddg_A Ubiquitin-conjugating e 99.7 1E-18 3.5E-23 145.3 6.7 90 1-91 306-399 (399)
9 3dkb_A Tumor necrosis factor, 93.8 0.11 3.6E-06 42.9 5.8 58 38-96 212-287 (390)
10 3zrh_A Ubiquitin thioesterase 91.7 0.38 1.3E-05 40.3 6.4 73 22-95 263-352 (454)
11 2jn4_A Hypothetical protein FI 69.2 0.052 1.8E-06 35.9 -6.2 33 7-40 27-59 (87)
12 1mdc_A Insect fatty acid bindi 62.5 24 0.00082 24.2 6.2 58 21-87 14-71 (132)
13 1ftp_A Muscle fatty acid bindi 60.2 37 0.0013 23.2 6.8 40 21-66 15-54 (133)
14 1eal_A Gastrotropin, ileal lip 57.4 39 0.0013 22.9 6.5 60 21-88 12-71 (127)
15 2rcq_A CRBP-II, retinol-bindin 57.1 38 0.0013 23.5 6.5 59 21-88 18-76 (141)
16 1o8v_A Fatty acid binding prot 55.3 44 0.0015 22.8 6.6 40 21-66 15-54 (134)
17 1lpj_A Retinol-binding protein 54.5 37 0.0013 23.2 6.1 59 21-88 14-72 (133)
18 1p6p_A Fatty acid-binding prot 54.1 40 0.0014 22.8 6.1 39 21-66 12-50 (125)
19 3ppt_A Sodium-calcium exchange 53.6 48 0.0017 22.7 6.5 58 21-87 14-71 (133)
20 1vyf_A SM14, 14 kDa fatty acid 52.7 42 0.0014 23.0 6.1 39 21-66 16-54 (135)
21 1mvg_A Liver basic fatty acid 52.4 39 0.0013 22.8 5.9 39 21-66 12-50 (125)
22 2qo4_A Liver-basic fatty acid 50.5 33 0.0011 23.3 5.2 39 21-66 13-51 (126)
23 1ifc_A Intestinal fatty acid b 50.2 57 0.002 22.2 6.5 58 21-87 13-70 (132)
24 2f73_A L-FABP, fatty acid-bind 46.8 47 0.0016 23.3 5.7 58 21-87 35-92 (149)
25 3vg7_A Fatty acid-binding prot 45.2 55 0.0019 22.4 5.7 60 21-89 16-75 (132)
26 4a1y_A Myelin P2 protein; tran 43.2 63 0.0022 22.1 5.8 58 21-87 16-73 (133)
27 3e98_A GAF domain of unknown f 42.9 4.9 0.00017 30.8 -0.1 32 2-40 36-67 (252)
28 3p6d_A Fatty acid-binding prot 42.7 75 0.0026 21.9 6.2 60 21-89 22-81 (139)
29 2a0a_A DER F 13; beta barrel, 40.8 82 0.0028 21.3 6.3 39 21-66 14-52 (131)
30 2g7b_A Cellular retinoic acid- 40.4 69 0.0024 21.9 5.6 39 21-66 13-53 (137)
31 3q6l_A Fatty acid-binding prot 39.5 88 0.003 22.0 6.2 60 21-89 35-94 (152)
32 1crb_A Cellular retinol bindin 37.5 95 0.0033 21.1 6.2 39 21-66 14-52 (134)
33 1b56_A Fatty acid binding prot 36.8 98 0.0034 21.0 7.1 58 21-87 17-74 (135)
34 3elx_A Ileal bIle acid-binding 35.9 66 0.0023 22.2 5.0 60 21-89 16-76 (138)
35 4a60_A Fatty acid-binding prot 33.8 1.1E+02 0.0038 21.5 5.9 60 21-89 37-96 (154)
36 4a5u_A RNA replicase polyprote 32.4 92 0.0032 22.4 5.3 49 41-92 107-157 (160)
37 1fdq_A Fatty acid-binding prot 30.3 1E+02 0.0035 20.8 5.2 39 21-66 14-52 (131)
38 3rsw_A Fatty acid-binding prot 29.1 1E+02 0.0036 21.8 5.1 39 21-66 40-78 (158)
39 2lba_A BABP protein; ileal bIl 28.5 55 0.0019 22.5 3.5 39 21-66 17-55 (136)
40 1ggl_A Protein (cellular retin 25.5 59 0.002 22.2 3.2 39 21-66 14-52 (134)
41 3sk9_A Putative uncharacterize 23.6 36 0.0012 26.1 1.9 26 2-29 208-233 (265)
No 1
>3by4_A OTU1, ubiquitin thioesterase OTU1; ubiquitin hydrolase, deubiquitinase, cell cycle, hydrolase; 1.55A {Saccharomyces cerevisiae} PDB: 3c0r_A
Probab=99.97 E-value=5.8e-32 Score=208.99 Aligned_cols=124 Identities=19% Similarity=0.237 Sum_probs=96.9
Q ss_pred ChHHHHHhCccccccccCCCCCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEeecccC-CCcEEEEE
Q 032766 1 MVVQYIVKNRETFEPFIEDDVPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIRNFDYH-EARMIHLS 79 (134)
Q Consensus 1 ~vv~ym~~n~d~f~~Fi~~~~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~~~~~~-~~~~i~L~ 79 (134)
+||+||++|++.|.+|+.+ .+|++||++|+++|+|||++||+|||++|+++|+|++.+++++ ..++++ ..++|+|+
T Consensus 52 ~vv~yi~~n~d~f~e~~~~-~~~e~Y~~~m~~~~~WGg~iEL~Als~~~~~~I~V~~~~~~~~--~~~~~~~~~~~I~L~ 128 (212)
T 3by4_A 52 MVSKEVLNNPVKFNDAILD-KPNKDYAQWILKMESWGGAIEIGIISDALAVAIYVVDIDAVKI--EKFNEDKFDNYILIL 128 (212)
T ss_dssp HHHHHHHHCTTTTCHHHHT-SCHHHHHHHTTSTTSCCCHHHHHHHHHHHTCEEEEEETTTTEE--EEESTTTCSEEEEEE
T ss_pred HHHHHHHHCHHHHhhhhcC-CCHHHHHHHhcCCCEEccHHHHHHHHHHHCCCEEEEECCCCCe--EEeCCCCCCCeEEEE
Confidence 4899999999999876666 6999999999999999999999999999999999999875433 233333 47799999
Q ss_pred EcCCCccceeecCCCCCCCCCcc---eEeehhhhHHhhhhhhhccccccchh
Q 032766 80 YHDGEHYNGVRLKEDSCIGSARP---IIIKVFIITLFSFRDRLFYYYNFVNF 128 (134)
Q Consensus 80 y~~g~HYdsv~~~~~~~~~p~~~---~~~~~~~~~l~~~~~~~~~~~~~~~f 128 (134)
|+ |+|||||+...+...-|... -.+......|.+.+++.+|||||++|
T Consensus 129 Y~-g~HYdsl~~~~d~~~f~~~~~~~~~~~~~a~~l~~~~~~~~~~t~~~~~ 179 (212)
T 3by4_A 129 FN-GIHYDSLTMNEFKTVFNKNQPESDDVLTAALQLASNLKQTGYSFNTHKA 179 (212)
T ss_dssp EC-SSCEEEEEETTTBCCEETTSTTHHHHHHHHHHHHHHHHHTTCCC-----
T ss_pred Ec-CCcceEEecCCCcccCCccccchHHHHHHHHHHHHHHHHcCCcccccCe
Confidence 97 89999999944444434333 33556678888999999999999988
No 2
>3pfy_A OTU domain-containing protein 5; structural genomics, structural genomics consortium, SGC, PE C65 otubain, hydrolase; HET: MSE PG4; 1.70A {Homo sapiens} PDB: 3tmp_A* 3tmo_A*
Probab=99.94 E-value=2.9e-27 Score=179.51 Aligned_cols=91 Identities=21% Similarity=0.371 Sum_probs=62.7
Q ss_pred ChHHHHHhCccccccccCCCCCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEe-ecccCCCcEEEEE
Q 032766 1 MVVQYIVKNRETFEPFIEDDVPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIR-NFDYHEARMIHLS 79 (134)
Q Consensus 1 ~vv~ym~~n~d~f~~Fi~~~~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~-~~~~~~~~~i~L~ 79 (134)
+||+||++|++.|++||++ +|++||++|+++|+|||++||+|||++|+++|+|++.+++++.+. +......++|+|+
T Consensus 92 ~vv~yi~~n~d~f~~Fv~~--~~e~Y~~~m~~~~~WGg~iEL~AlS~~~~v~I~V~~~~~~~i~i~~g~~~~~~~~I~L~ 169 (185)
T 3pfy_A 92 HCMDYLMKNADYFSNYVTE--DFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVS 169 (185)
T ss_dssp HHHHHHHHTHHHHTTCC-------------------CCHHHHHHHHHHHTSCEEEESSCSSCSEEECTTSCCTTSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhc--cHHHHHHHhhCCCccchHHHHHHHHHhhCCcEEEEECCCCCeEEecCccCCCCCEEEEE
Confidence 4899999999999999986 799999999999999999999999999999999999886555442 2223356899999
Q ss_pred EcCCCccceeecCC
Q 032766 80 YHDGEHYNGVRLKE 93 (134)
Q Consensus 80 y~~g~HYdsv~~~~ 93 (134)
|+.++|||||+...
T Consensus 170 Y~~~~HYnSv~~p~ 183 (185)
T 3pfy_A 170 YHRNIHYNSVVNPN 183 (185)
T ss_dssp EETTTEEEEEECC-
T ss_pred ECCCCCcccccCCC
Confidence 99999999998753
No 3
>3phu_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase; 2.20A {Crimean-congo hemorrhagic fever VIRUSIBAR10200}
Probab=99.92 E-value=1.8e-25 Score=173.45 Aligned_cols=112 Identities=13% Similarity=0.168 Sum_probs=92.5
Q ss_pred ChHHHHHhCccccccccCCCCCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCC--ceEEeecccC-CCcEEE
Q 032766 1 MVVQYIVKNRETFEPFIEDDVPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSP--RWYIRNFDYH-EARMIH 77 (134)
Q Consensus 1 ~vv~ym~~n~d~f~~Fi~~~~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~--~~~i~~~~~~-~~~~i~ 77 (134)
+||+||++|++. |+.+ .+|++||++|+++|+|||++||+|+|++|+++|+|++.+.+ .+.+..|+++ ..++|+
T Consensus 70 ~va~yi~~n~d~---~~~~-~~feeY~~~m~~~g~WGG~iEL~AlS~~~~v~I~V~~~d~~g~~~~i~~fge~~~~~~I~ 145 (219)
T 3phu_A 70 AARKYYQEEPEA---RLVG-LSLEDYLKRMLSDNEWGSTLEASMLAKEMGITIIIWTVAASDEVEAGIKFGDGDVFTAVN 145 (219)
T ss_dssp HHHHHGGGCHHH---HHHC-CCHHHHHHHHHSTTCCCCHHHHHHHHHHTTCCEEEEEESSSSBEEEEEEESSCCTTTSEE
T ss_pred HHHHHHHhChhh---hhcC-CCHHHHHHHhcCCCccCCHHHHHHHHHHhCCCEEEEEecCCCCceeEEEecCCCCCCeEE
Confidence 389999999999 3334 68999999999999999999999999999999999988765 4445455543 368899
Q ss_pred EEEcCCCccceeecCCCCCCCCCcceEeehhhhHHhhhh
Q 032766 78 LSYHDGEHYNGVRLKEDSCIGSARPIIIKVFIITLFSFR 116 (134)
Q Consensus 78 L~y~~g~HYdsv~~~~~~~~~p~~~~~~~~~~~~l~~~~ 116 (134)
|+|++|+|||||++..+.+.+++.|+.+-.......+|.
T Consensus 146 L~Y~g~~HYdSL~~~~d~~~~~~~~~~l~~~~~~~~~~~ 184 (219)
T 3phu_A 146 LLHSGQTHFDALRILPQFETDTREALSLMDRVIAVDQLT 184 (219)
T ss_dssp EEEETTTEEEEEEECTTTCCSCCCCCCHHHHHHHHHHHH
T ss_pred EEECCCcCchhheECCCCCCCCCcchhHHHHHHHHHHHH
Confidence 999888999999999999999988887665544444443
No 4
>3phx_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase-protein complex; 1.60A {Crimean-congo hemorrhagic fever virus} PDB: 3phw_A 3pt2_A 3pse_A 3prp_A 3prm_A
Probab=99.92 E-value=1.8e-25 Score=169.59 Aligned_cols=104 Identities=13% Similarity=0.164 Sum_probs=77.4
Q ss_pred ChHHHHHhCccccccccCCCCCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCc--eEEeecccC-CCcEEE
Q 032766 1 MVVQYIVKNRETFEPFIEDDVPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPR--WYIRNFDYH-EARMIH 77 (134)
Q Consensus 1 ~vv~ym~~n~d~f~~Fi~~~~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~--~~i~~~~~~-~~~~i~ 77 (134)
+||+||++|++. |+.+ .+|++||++|+++|+|||++||+|||++|+++|+|++.+.+. +.+..|+++ ..++|+
T Consensus 70 ~~~~yi~~~~~~---~~~~-~~~~~Y~~~m~~~~~WGg~iEL~Als~~~~v~I~V~~~d~~~~~~~i~~f~~~~~~~~I~ 145 (185)
T 3phx_A 70 AARKYYQEEPEA---RLVG-LSLEDYLKRMLSDNEWGSTLEASMLAKEMGITIIIWTVAASDEVEAGIKFGDGDVFTAVN 145 (185)
T ss_dssp HHHHHGGGCTTH---HHHC-CCHHHHHHHHTSTTCCCBHHHHHHHHHHHCCCEEEEEC--CCBCCEEEEESSCCTTTSEE
T ss_pred HHHHHHHhChHh---hhcC-CCHHHHHHHhhCCCccCcHHHHHHHHHHHCCcEEEEEecCCCCceEEEEcCCCCCCCEEE
Confidence 389999999999 3334 689999999999999999999999999999999999987544 444455544 368899
Q ss_pred EEEcCCCccceeecCCCCCCCCCcceEeehh
Q 032766 78 LSYHDGEHYNGVRLKEDSCIGSARPIIIKVF 108 (134)
Q Consensus 78 L~y~~g~HYdsv~~~~~~~~~p~~~~~~~~~ 108 (134)
|+|++|+|||||++..+.+..+..++.+...
T Consensus 146 L~Y~g~~HYdsl~~~~~~~~~~~~~~~~~~~ 176 (185)
T 3phx_A 146 LLHSGQTHFDALRILPQFETDTREALSLMDR 176 (185)
T ss_dssp EEEETTTEEEEEEECGGGC------------
T ss_pred EEECCCcCchhceECCCCCCCCcccccHHHH
Confidence 9998889999999999888877777765544
No 5
>1tff_A Ubiquitin thiolesterase protein OTUB2; hydrolase; 2.10A {Homo sapiens} SCOP: d.3.1.11
Probab=99.89 E-value=2e-23 Score=163.26 Aligned_cols=92 Identities=17% Similarity=0.316 Sum_probs=77.8
Q ss_pred ChHHHHHhCccccccccCCCCCHHHHHH-hhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEE--eecccCCCcEEE
Q 032766 1 MVVQYIVKNRETFEPFIEDDVPFDEYCQ-SMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYI--RNFDYHEARMIH 77 (134)
Q Consensus 1 ~vv~ym~~n~d~f~~Fi~~~~~~~~Y~~-~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i--~~~~~~~~~~i~ 77 (134)
+++.||++|+++|+||++++.++++||+ .|+..++||||+||+|||++++++|+|++.+++...+ ..+++...+.|+
T Consensus 138 lta~~i~~~~d~f~pFi~~~~~~~~yC~~~ve~~~~~~~~iei~ALa~aL~v~I~V~~~d~~~~~~~~~~~~~~~~~~I~ 217 (234)
T 1tff_A 138 LTSAFIRNRADFFRHFIDEEMDIKDFCTHEVEPMATECDHIQITALSQALSIALQVEYVDEMDTALNHHVFPEAATPSVY 217 (234)
T ss_dssp HHHHHHHHTHHHHGGGSCTTSCHHHHHHHHTSSTTCCCCHHHHHHHHHHHTCCEEEEECC-------CCCCCCCSSCSEE
T ss_pred HHHHHHHHCHHHHhhhhcCCCCHHHHHHHHhhhhhcccccHHHHHHHHHhCCCEEEEEcCCCCCccccccCCCCCCCeEE
Confidence 4789999999999999998679999999 7999999999999999999999999999988754222 356666678899
Q ss_pred EEEcCCCccceeecCC
Q 032766 78 LSYHDGEHYNGVRLKE 93 (134)
Q Consensus 78 L~y~~g~HYdsv~~~~ 93 (134)
|+|++| |||+|++..
T Consensus 218 LlY~pg-HYdily~~~ 232 (234)
T 1tff_A 218 LLYKTS-HYNILYAAD 232 (234)
T ss_dssp EEEETT-EEEEEEECC
T ss_pred EEECCC-CceecccCC
Confidence 999866 999999874
No 6
>2zfy_A Ubiquitin thioesterase OTUB1; otubain, structural genomics, structural genomics consortium, SGC, alternative splicing, hydrolase, immune response; 1.69A {Homo sapiens} PDB: 4ddg_B 4ddi_A
Probab=99.88 E-value=4.1e-23 Score=161.36 Aligned_cols=90 Identities=21% Similarity=0.295 Sum_probs=78.4
Q ss_pred ChHHHHHhCccccccccCCCCCHHHHHH-hhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCc---eEEeecccCCCcEE
Q 032766 1 MVVQYIVKNRETFEPFIEDDVPFDEYCQ-SMETDGTWAGHMELQAASLVTHSNICIHRHMSPR---WYIRNFDYHEARMI 76 (134)
Q Consensus 1 ~vv~ym~~n~d~f~~Fi~~~~~~~~Y~~-~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~---~~i~~~~~~~~~~i 76 (134)
+++.||++|+++|+||++++.++++||+ .++.+++||||+||+|||++++++|.|++.+++. +....+++...++|
T Consensus 141 lta~yi~~~~d~f~pFi~~~~~~e~yc~~~ve~~~~~~~~i~i~ALa~al~v~I~V~~~d~~~~~~v~~~~f~~~~~p~I 220 (234)
T 2zfy_A 141 LTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFPEGSEPKV 220 (234)
T ss_dssp HHHHHHHHTHHHHGGGCCSSCCHHHHHHHHTSSTTCCCCHHHHHHHHHHHTCCEEEEECC-CCSSCCEEEEESTTCCCSE
T ss_pred HHHHHHHHCHHHHhcccCCCCCHHHHHHHHhhhHhhcCCHHHHHHHHHHhCCCEEEEEcCCCCCCcccceeCCCCCCCeE
Confidence 4789999999999999998779999998 5999999999999999999999999999987543 44456666667889
Q ss_pred EEEEcCCCccceeec
Q 032766 77 HLSYHDGEHYNGVRL 91 (134)
Q Consensus 77 ~L~y~~g~HYdsv~~ 91 (134)
+|+|+.| |||+++|
T Consensus 221 ~LlY~pg-HYdiLy~ 234 (234)
T 2zfy_A 221 YLLYRPG-HYDILYK 234 (234)
T ss_dssp EEEEETT-EEEEEEC
T ss_pred EEEECCC-CcccCCC
Confidence 9999876 9999986
No 7
>4dhi_B Ubiquitin thioesterase otubain-like; ubiquitin E2 enzyme fold, ubiquitination, hydrolase-ligase C; 1.80A {Caenorhabditis elegans} PDB: 4dhj_A 4dhz_A
Probab=99.82 E-value=9.7e-21 Score=151.63 Aligned_cols=92 Identities=20% Similarity=0.348 Sum_probs=76.5
Q ss_pred ChHHHHHhCccccccccCCCCCHHHHHH-hhcCCCccCCHHHHHHHHhhcCccEEEEEcCCC---ceEEee-cccCC---
Q 032766 1 MVVQYIVKNRETFEPFIEDDVPFDEYCQ-SMETDGTWAGHMELQAASLVTHSNICIHRHMSP---RWYIRN-FDYHE--- 72 (134)
Q Consensus 1 ~vv~ym~~n~d~f~~Fi~~~~~~~~Y~~-~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~---~~~i~~-~~~~~--- 72 (134)
+++.||++|+++|+||++|+.++++||+ +|+..++||||+||+|||++|+++|.|+..+++ .+.... |+++.
T Consensus 176 lts~yi~~~~d~f~pFi~~~~~v~~yC~~eVe~~~~e~d~leI~ALa~aL~v~I~V~ylDrs~g~~v~~h~~fp~~~~~~ 255 (284)
T 4dhi_B 176 ITSAFLKQNSEEYAPFIDEGMTVAQYCEQEIEPMWKDADHLAINSLIKAAGTRVRIEYMDRTAAPNGGWHYDIPSDDQQI 255 (284)
T ss_dssp HHHHHHHHTHHHHGGGSCTTCCHHHHHHHHTSSTTCCCCHHHHHHHHHHTTCCEEEEESSGGGCTTSSSEEEESCCCSCC
T ss_pred HHHHHHHHCHHHHHhhcCCCCCHHHHHHHhceehhhcccHHHHHHHHHHhCCcEEEEEecCCCCCCCcccccCCCCCCCC
Confidence 4789999999999999998789999999 899999999999999999999999999988642 111112 44432
Q ss_pred CcEEEEEEcCCCccceeecCC
Q 032766 73 ARMIHLSYHDGEHYNGVRLKE 93 (134)
Q Consensus 73 ~~~i~L~y~~g~HYdsv~~~~ 93 (134)
.+.|+|+|.+ +|||.|++..
T Consensus 256 ~p~I~LLYrp-gHYDILY~~~ 275 (284)
T 4dhi_B 256 APEITLLYRP-GHYDVIYKKD 275 (284)
T ss_dssp CCSEEEEEET-TEEEEEEECC
T ss_pred CCEEEEeecC-CCccccccCC
Confidence 3689999976 5999999974
No 8
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.75 E-value=1e-18 Score=145.34 Aligned_cols=90 Identities=21% Similarity=0.293 Sum_probs=77.6
Q ss_pred ChHHHHHhCccccccccCCCCCHHHHHH-hhcCCCccCCHHHHHHHHhhcCccEEEEEcCCC---ceEEeecccCCCcEE
Q 032766 1 MVVQYIVKNRETFEPFIEDDVPFDEYCQ-SMETDGTWAGHMELQAASLVTHSNICIHRHMSP---RWYIRNFDYHEARMI 76 (134)
Q Consensus 1 ~vv~ym~~n~d~f~~Fi~~~~~~~~Y~~-~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~---~~~i~~~~~~~~~~i 76 (134)
+++.||++|+++|+||++++.++++||+ .|+..++||||+||+|||++++++|.|+..++. .+....+++...+.|
T Consensus 306 lts~~i~~~~d~f~pFi~~~~~v~~yc~~~ve~~~~e~d~l~I~ALa~al~v~I~V~yld~~~~~~v~~~~~~~~~~~~I 385 (399)
T 4ddg_A 306 LTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFPEGSEPKV 385 (399)
T ss_dssp HHHHHHHHTHHHHGGGSSSSCCHHHHHHHHTSSTTCCBCHHHHHHHHHHHTCCCEEEECSCCSSSCCCEEETTTTCCCCC
T ss_pred HHHHHHHHCHHHHhcccCCCCCHHHHHHHhceeHHhhCcHHHHHHHHHHcCCcEEEEEcCCCCCCccceeeCCCCCCCEE
Confidence 4789999999999999998779999999 899999999999999999999999999987642 222234566667889
Q ss_pred EEEEcCCCccceeec
Q 032766 77 HLSYHDGEHYNGVRL 91 (134)
Q Consensus 77 ~L~y~~g~HYdsv~~ 91 (134)
+|+|..| |||.|++
T Consensus 386 ~LLYrPg-HYDiLY~ 399 (399)
T 4ddg_A 386 YLLYRPG-HYDILYK 399 (399)
T ss_dssp EEEEETB-EEEEEEC
T ss_pred EEEEcCC-ccccCCC
Confidence 9999776 9999986
No 9
>3dkb_A Tumor necrosis factor, alpha-induced protein 3; OTU domain, DUB domain, apoptosis, cytoplasm, DNA-binding, hydrolase, metal-binding, nucleus; 2.50A {Homo sapiens} PDB: 2vfj_A
Probab=93.82 E-value=0.11 Score=42.88 Aligned_cols=58 Identities=12% Similarity=0.150 Sum_probs=39.6
Q ss_pred CHHHHHHHHhhcCccEEEEEcC-------CCce---EEe-ec-----ccC--CCcEEEEEEcCCCccceeecCCCCC
Q 032766 38 GHMELQAASLVTHSNICIHRHM-------SPRW---YIR-NF-----DYH--EARMIHLSYHDGEHYNGVRLKEDSC 96 (134)
Q Consensus 38 g~iEL~Als~~~~v~I~V~~~~-------~~~~---~i~-~~-----~~~--~~~~i~L~y~~g~HYdsv~~~~~~~ 96 (134)
-++-+-+||.++++||+|+... +... ... .| +.+ .+.+|.|+|.+ .||.++..+.+..
T Consensus 212 EeiHIFvLAhVLRRPIIV~~d~~lr~~~~Ge~~~Pi~f~GIYLPLlwpp~~C~rsPI~LgY~s-~HFsaLV~me~~~ 287 (390)
T 3dkb_A 212 EEIHIFVLCNILRRPIIVISDKMLRSLESGSNFAPLKVGGIYLPLHWPAQECYRYPIVLGYDS-HHFVPLVTLKDSG 287 (390)
T ss_dssp CHHHHHHHHHHTTSCEEEEECCCCTTCCCC----CCCCCEEECCTTSCTTSSCSSCEEEEECS-SCEEEEEEBCSSS
T ss_pred HHHHHHHHHHHhcCCEEEEechhhccccCCCccCcCccCceecCCcCCHHHccCCceEEEecc-CceeeeeecccCC
Confidence 3888999999999999999632 1111 111 11 111 46789999977 5999999986543
No 10
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=91.66 E-value=0.38 Score=40.30 Aligned_cols=73 Identities=11% Similarity=0.098 Sum_probs=52.6
Q ss_pred CHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCC------c---eEEe-ec-----c-cC-CCcEEEEEEcCCC
Q 032766 22 PFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSP------R---WYIR-NF-----D-YH-EARMIHLSYHDGE 84 (134)
Q Consensus 22 ~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~------~---~~i~-~~-----~-~~-~~~~i~L~y~~g~ 84 (134)
.|+.=+..-+.+|.==-++-+-+||.++++||+|+..... . +.++ .| + +. .+.+|.|+|.+|
T Consensus 263 EW~~iv~~As~Pg~sLEeiHIFvLAhVLRRPIIV~~d~~lrs~~Ge~l~pi~f~GIYLPLlwpp~~C~rsPIvLgY~~g- 341 (454)
T 3zrh_A 263 DWAFILSLASQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRG- 341 (454)
T ss_dssp HHHHHHHHTTSTTCCCCHHHHHHHHHHTTSCEEEEECSSCC-----CCCCCCCCEEECCTTSCGGGSCSCCEEEEEETT-
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHhcCCeEEeccccccccCCCcCCCcccceeeccCcCCHHHhcCCceEEEeccc-
Confidence 5666677677888877899999999999999999986321 1 1111 01 1 11 467899999875
Q ss_pred ccceeecCCCC
Q 032766 85 HYNGVRLKEDS 95 (134)
Q Consensus 85 HYdsv~~~~~~ 95 (134)
||.++......
T Consensus 342 HFsaLV~~~~~ 352 (454)
T 3zrh_A 342 HFSALVAMEND 352 (454)
T ss_dssp EEEEEEEBCCC
T ss_pred ceeeeeecccc
Confidence 99999988654
No 11
>2jn4_A Hypothetical protein FIXU, NIFT; structural genomics, PSI-2, protein structure initiative, northeast ST genomics consortium, NESG; NMR {Rhodopseudomonas palustris} SCOP: b.173.1.1
Probab=69.16 E-value=0.052 Score=35.91 Aligned_cols=33 Identities=18% Similarity=0.434 Sum_probs=25.5
Q ss_pred HhCccccccccCCCCCHHHHHHhhcCCCccCCHH
Q 032766 7 VKNRETFEPFIEDDVPFDEYCQSMETDGTWAGHM 40 (134)
Q Consensus 7 ~~n~d~f~~Fi~~~~~~~~Y~~~m~~~g~WGg~i 40 (134)
|++.+-...||.- .+.|+=+-.|++++.|||.+
T Consensus 27 R~~~~GLs~YVpK-KDLEE~VVs~E~~~~WGG~v 59 (87)
T 2jn4_A 27 RKTATGHSAYVAK-KDLEELIVEMENPALWGGKV 59 (87)
T ss_dssp EECSSCEEEEETT-TTEEEEEEEESSSSSCSSEE
T ss_pred EeCCCceEEEEeC-CcchhheeeeecccccCcEE
Confidence 5566666777776 67888788889999999965
No 12
>1mdc_A Insect fatty acid binding protein; HET: PLM; 1.75A {Manduca sexta} SCOP: b.60.1.2
Probab=62.48 E-value=24 Score=24.21 Aligned_cols=58 Identities=10% Similarity=0.106 Sum_probs=34.5
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEeecccCCCcEEEEEEcCCCccc
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIRNFDYHEARMIHLSYHDGEHYN 87 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~~~~~~~~~~i~L~y~~g~HYd 87 (134)
+.||+|+..+ |=...+..+|...+-.+.| ..++..+.+... ...+...+.|..|+-++
T Consensus 14 eNfdeylkal------Gv~~~~rk~a~~~kp~~ei-~~~Gd~~~ikt~--s~~k~~~~~F~lGeEfe 71 (132)
T 1mdc_A 14 ENFDGFLKSA------GLSDDKIQALVSDKPTQKM-EANGDSYSNTST--GGGGAKTVSFKSGVEFD 71 (132)
T ss_dssp ESHHHHHHTT------TCCHHHHHHHHHCCCEEEE-EEETTEEEEEEE--STTCCEEEEECTTCCEE
T ss_pred cCHHHHHHHh------CCCHHHHhhhccCCceEEE-EEeCCEEEEEEE--cCCceeEEEEeCCCcEE
Confidence 4799999998 3346778888888755554 445556666531 12233444455444443
No 13
>1ftp_A Muscle fatty acid binding protein; binding protein(fatty acid); 2.20A {Schistocerca gregaria} SCOP: b.60.1.2 PDB: 2flj_A*
Probab=60.23 E-value=37 Score=23.22 Aligned_cols=40 Identities=15% Similarity=0.186 Sum_probs=28.4
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEe
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIR 66 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~ 66 (134)
+.||+|+..+ |=...+..+|...+-.+.|-+.++..+.+.
T Consensus 15 eNfdeylkal------Gv~~~~rk~a~~~kp~~ei~~~~Gd~~~ik 54 (133)
T 1ftp_A 15 TNFEEYMKAI------GVGAIERKAGLALSPVIELEILDGDKFKLT 54 (133)
T ss_dssp ESHHHHHHHT------TCCHHHHHHHTTCCCEEEEEECSSSEEEEE
T ss_pred cCHHHHHHHh------CCCHHHHHHhhcCCceEEEEEcCCCEEEEE
Confidence 4799999998 344678888888876666655366666664
No 14
>1eal_A Gastrotropin, ileal lipid binding protein; intracellular lipid binding protein, bIle acid binding, ileal epithelium, fatty acid binding protein; NMR {Sus scrofa} SCOP: b.60.1.2 PDB: 1eio_A* 1o1u_A 1o1v_A*
Probab=57.41 E-value=39 Score=22.93 Aligned_cols=60 Identities=10% Similarity=0.094 Sum_probs=36.4
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEeecccCCCcEEEEEEcCCCccce
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIRNFDYHEARMIHLSYHDGEHYNG 88 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~~~~~~~~~~i~L~y~~g~HYds 88 (134)
+.||+|+..+ |=...+..+|...+-.+.| ..++..+.+... -...+...+.|..|+-++-
T Consensus 12 eNfdeymkal------Gv~~~~rk~a~~~kp~~ei-~~~Gd~~~ikt~-~s~~k~~~~~F~lGeEfee 71 (127)
T 1eal_A 12 KNYDEFMKRL------ALPSDAIDKARNLKIISEV-KQDGQNFTWSQQ-YPGGHSITNTFTIGKECDI 71 (127)
T ss_dssp SCTTHHHHHH------TCCHHHHHHHTTCCEEEEE-EESSSEEEEEEE-CSSSCEEEEEEESSSCEEE
T ss_pred cCHHHHHHHh------CCCHHHHHhhhcCCcEEEE-EEcCCEEEEEEE-ECCCceEEEEEECCCcEEE
Confidence 4799999998 3456778888888755554 445566666532 0223445556655554443
No 15
>2rcq_A CRBP-II, retinol-binding protein II, cellular; cellular retinol binding protein II, lipid-binding protein, X-RAY, cytoplasm, transport, vitamin A; HET: TLA; 1.20A {Homo sapiens} PDB: 2rct_A* 1b4m_A 1eii_A* 1opa_A 1opb_A* 1kqw_A* 1kqx_A
Probab=57.11 E-value=38 Score=23.52 Aligned_cols=59 Identities=8% Similarity=0.205 Sum_probs=35.5
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEeecccCCCcEEEEEEcCCCccce
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIRNFDYHEARMIHLSYHDGEHYNG 88 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~~~~~~~~~~i~L~y~~g~HYds 88 (134)
+.||+|+..+. =...+..+|...+..+.|-+ ++..+.+.. ....+...+.|..|+-++-
T Consensus 18 eNfdeylkalG------v~~~~rk~a~~~kp~~ei~~-~Gd~~tikt--~s~~k~~~~~F~lGeEfee 76 (141)
T 2rcq_A 18 ENFEGYMKALD------IDFATRKIAVRLTQTKVIDQ-DGDNFKTKT--TSTFRNYDVDFTVGVEFDE 76 (141)
T ss_dssp ESHHHHHHHTT------CCHHHHHHHTTCCCEEEEEE-ETTEEEEEE--ECSSCEEEEEEETTCCEEE
T ss_pred cCHHHHHHHhC------CCHHHHHHhhcCCcEEEEEE-eCCEEEEEE--EcCCeEEEEEEECCCeEEe
Confidence 58999999983 34677888888875555544 555566643 1223344445555544433
No 16
>1o8v_A Fatty acid binding protein homolog; lipid binding protein, hydatid disease, fatty-acid transport; HET: PLM; 1.60A {Echinococcus granulosus} SCOP: b.60.1.2
Probab=55.27 E-value=44 Score=22.83 Aligned_cols=40 Identities=10% Similarity=0.185 Sum_probs=27.8
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEe
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIR 66 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~ 66 (134)
+.||+|+..+ |=...+..+|...+-.+.|-+.++..+.+.
T Consensus 15 eNfdeylkal------Gv~~~~rk~a~~~kp~~ei~~~~Gd~~~ik 54 (134)
T 1o8v_A 15 EGFDKIMERL------GVDFVTRKMGNLVKPNLIVTDLGGGKYKMR 54 (134)
T ss_dssp ESHHHHHHHH------TCCHHHHHHHHHCCCEEEEEEEETTEEEEE
T ss_pred cCHHHHHHHc------CCCHHHHHHhhcCCceEEEEEcCCCEEEEE
Confidence 4799999998 334677888888876665555255556654
No 17
>1lpj_A Retinol-binding protein IV, cellular; cellular retinol-binding protein, CRBP, vitamin A, ILBPS, transport protein; 2.00A {Homo sapiens} SCOP: b.60.1.2
Probab=54.50 E-value=37 Score=23.17 Aligned_cols=59 Identities=12% Similarity=0.217 Sum_probs=34.7
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEeecccCCCcEEEEEEcCCCccce
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIRNFDYHEARMIHLSYHDGEHYNG 88 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~~~~~~~~~~i~L~y~~g~HYds 88 (134)
+.||+|+..+. =...+..+|...+-.+.| ..++..+.+... ...+...+.|..|+-++-
T Consensus 14 eNfdeylkalG------v~~~~rk~a~~~kp~~ei-~~~Gd~~~ikt~--s~~k~~~~~F~lGeefee 72 (133)
T 1lpj_A 14 DNFEGYMLALG------IDFATRKIAKLLKPQKVI-EQNGDSFTIHTN--SSLRNYFVKFKVGEEFDE 72 (133)
T ss_dssp ESHHHHHHHHT------CCHHHHHHHTTCCCEEEE-EEETTEEEEEEE--CSSCCEEEEEETTCCEEE
T ss_pred cCHHHHHHHhC------CCHHHHHHHHhCCCeEEE-EEcCCEEEEEEE--eCCceeEEEeeCCCceEE
Confidence 47999999983 346778888887755554 445556666431 112233444545544443
No 18
>1p6p_A Fatty acid-binding protein, liver; beta barrel, lipid binding protein; 2.50A {Bufo arenarum} SCOP: b.60.1.2
Probab=54.13 E-value=40 Score=22.79 Aligned_cols=39 Identities=5% Similarity=0.124 Sum_probs=26.6
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEe
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIR 66 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~ 66 (134)
+.||+|+..|. =...+..+|...+-.+.| ..++..+.+.
T Consensus 12 eNfdeymkalG------v~~~~rk~a~~~kp~~ei-~~~Gd~~~ik 50 (125)
T 1p6p_A 12 ENYENFLRTVG------LPEDIIKVAKDVNPVIEI-EQNGNEFVVT 50 (125)
T ss_dssp ESHHHHHHHHT------CCHHHHHHHTTCCCEEEE-EECSSEEEEE
T ss_pred cCHHHHHHHhC------CCHHHHHhhccCCcEEEE-EEcCCEEEEE
Confidence 47999999983 346778888877755544 4455556554
No 19
>3ppt_A Sodium-calcium exchanger; fatty acid transporter, lipid binding proteins, squid nerve, regulatory factor, beta-sandwich, fatty acid; HET: PAM; 1.28A {Loligo pealei} SCOP: b.60.1.0 PDB: 3pp6_A*
Probab=53.62 E-value=48 Score=22.67 Aligned_cols=58 Identities=16% Similarity=0.316 Sum_probs=34.5
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEeecccCCCcEEEEEEcCCCccc
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIRNFDYHEARMIHLSYHDGEHYN 87 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~~~~~~~~~~i~L~y~~g~HYd 87 (134)
+.||+|+..|. =...+.-++...+..+.|-+ ++..+.+.. ....+...+.|..|+-++
T Consensus 14 eNfdeymkalG------v~~~~rk~~~~~kp~~~I~~-~Gd~~tikt--~s~~k~~~~~F~lGeEfe 71 (133)
T 3ppt_A 14 ENFDDYMKAVG------VGMVMRKMANAATPTQEIKI-DGDSWSIKT--STTFKTTDISFTIGQEFD 71 (133)
T ss_dssp ESHHHHHHHHT------CCHHHHHHHHHCCCEEEEEE-ETTEEEEEE--ECSSCEEEEEEETTCCEE
T ss_pred cCHHHHHHHhC------CCHHHHhhhhcCCcEEEEEE-CCCEEEEEE--EeCCccEEEEEECCCcEE
Confidence 47999999983 34577778888775555544 555566643 112334445555444444
No 20
>1vyf_A SM14, 14 kDa fatty acid binding protein; transport protein; HET: OLA; 1.85A {Schistosoma mansoni} SCOP: b.60.1.2 PDB: 1vyg_A* 2poa_A
Probab=52.74 E-value=42 Score=22.98 Aligned_cols=39 Identities=5% Similarity=0.015 Sum_probs=26.9
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEe
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIR 66 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~ 66 (134)
+.||+|++.+ |=...+..+|...+..+.|-+ ++..+.+.
T Consensus 16 eNfdeylkal------Gv~~~~rk~a~~~kp~~ei~~-~Gd~~~ik 54 (135)
T 1vyf_A 16 HNFDAVMSKL------GVSWATRQIGNTVTPTVTFTM-DGDKMTML 54 (135)
T ss_dssp ESHHHHHHHT------TCCHHHHHHHTTCCCEEEEEE-ETTEEEEE
T ss_pred cCHHHHHHHc------CCCHHHHHhhccCCceEEEEE-cCCEEEEE
Confidence 4799999998 334677888888875555544 55556554
No 21
>1mvg_A Liver basic fatty acid binding protein; beta-barrel, calycin, ten antiparallel beta strands, helix- turn-helix motif, transport protein; NMR {Gallus gallus} SCOP: b.60.1.2 PDB: 1tvq_A 1tw4_A* 1zry_A 2jn3_A* 2k62_A*
Probab=52.41 E-value=39 Score=22.85 Aligned_cols=39 Identities=8% Similarity=0.152 Sum_probs=26.6
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEe
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIR 66 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~ 66 (134)
+.||+|+..|. =...+..+|...+-.+.| ..++..+.+.
T Consensus 12 eNfdeylkalG------v~~~~rk~a~~~kp~~ei-~~~Gd~~~ik 50 (125)
T 1mvg_A 12 ENYEEFLKALA------LPEDLIKMARDIKPIVEI-QQKGDDFVVT 50 (125)
T ss_dssp ESHHHHHHHSS------SCHHHHHHHHTCCCEEEE-EEETTEEEEE
T ss_pred cCHHHHHHHcC------CCHHHHHhhccCCcEEEE-EEeCCEEEEE
Confidence 47999999983 346778888887755555 4455556654
No 22
>2qo4_A Liver-basic fatty acid binding protein; liver bIle acid-binding protein, BABP, fatty acid-binding PR FABP, cholic acid cholate, bIle acid; HET: CHD; 1.50A {Danio rerio} PDB: 2qo6_A* 2qo5_A* 2ftb_A* 2ft9_A*
Probab=50.49 E-value=33 Score=23.27 Aligned_cols=39 Identities=10% Similarity=0.127 Sum_probs=27.0
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEe
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIR 66 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~ 66 (134)
+.||+|++.+ |=...+..+|...+-.+.| ..++..+.+.
T Consensus 13 eNfdeylkal------Gv~~~~rk~a~~~kp~~ei-~~~Gd~~~ik 51 (126)
T 2qo4_A 13 ENYEEFLRAI------SLPEEVIKLAKDVKPVTEI-QQNGSDFTIT 51 (126)
T ss_dssp ESHHHHHHHT------TCCHHHHHHTTTCCCEEEE-EEETTEEEEE
T ss_pred cCHHHHHHHc------CCCHHHHHhhccCCceEEE-EEeCCEEEEE
Confidence 4799999998 3346778888888755555 4455556654
No 23
>1ifc_A Intestinal fatty acid binding protein; lipid-binding protein; 1.19A {Rattus norvegicus} SCOP: b.60.1.2 PDB: 1ael_A 1icm_A* 1ifb_A 1ure_A* 2ifb_A* 3akn_A* 1icn_A* 1t8v_A 1dc9_A 1a57_A 1kzx_A 1kzw_A 3akm_A* 3ifb_A 1sa8_A
Probab=50.22 E-value=57 Score=22.18 Aligned_cols=58 Identities=9% Similarity=0.219 Sum_probs=34.1
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEeecccCCCcEEEEEEcCCCccc
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIRNFDYHEARMIHLSYHDGEHYN 87 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~~~~~~~~~~i~L~y~~g~HYd 87 (134)
+.||+|+..+. =...+..+|...+-.+.|-+ ++..+.+... ...+...+.|..|+-++
T Consensus 13 eNfdeylkalG------v~~~~rk~a~~~kp~~ei~~-~Gd~~~ikt~--s~~k~~~~~F~lGeEfe 70 (132)
T 1ifc_A 13 ENYEKFMEKMG------INVVKRKLGAHDNLKLTITQ-EGNKFTVKES--SNFRNIDVVFELGVDFA 70 (132)
T ss_dssp ESHHHHHHHHT------CCHHHHHHHTTCCCEEEEEE-ETTEEEEEEE--CSSCEEEEEEETTCCEE
T ss_pred cCHHHHHHHcC------CCHHHHHHhccCCCeEEEEE-eCCEEEEEEE--cCCeEEEEEEECCCcEE
Confidence 47999999983 34677788887775555544 5555666531 12334444454444443
No 24
>2f73_A L-FABP, fatty acid-binding protein, liver; structural genomics, structural genomics consortium, SGC, lipid binding protein; 2.50A {Homo sapiens} SCOP: b.60.1.2
Probab=46.82 E-value=47 Score=23.32 Aligned_cols=58 Identities=12% Similarity=0.115 Sum_probs=34.4
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEeecccCCCcEEEEEEcCCCccc
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIRNFDYHEARMIHLSYHDGEHYN 87 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~~~~~~~~~~i~L~y~~g~HYd 87 (134)
+.||+|++.+. =...+..+|...+..+.| ..++..+.|... ...+...+.|..|+=++
T Consensus 35 ENfdeylkalG------V~~~~Rk~a~~~kp~~eI-~~~Gd~~tikt~--st~kt~~~~F~lGeEfe 92 (149)
T 2f73_A 35 ENFEAFMKAIG------LPEELIQKGKDIKGVSEI-VQNGKHFKFTIT--AGSKVIQNEFTVGEECE 92 (149)
T ss_dssp ECHHHHHHHTT------CCHHHHHHHTTCCCEEEE-EEETTEEEEEEE--ETTEEEEEEEETTSEEE
T ss_pred cCHHHHHHHcC------CCHHHHhhhccCCceEEE-EEeCCEEEEEEE--eCCeEEEEEEeCCCcEE
Confidence 58999999983 346778888888755554 445556666431 12334444454444433
No 25
>3vg7_A Fatty acid-binding protein, liver; lfabp, S-SAD, copper kalpha, palmitic acid, lipid binding PR; HET: PLM; 1.44A {Homo sapiens} PDB: 3b2i_A* 3b2j_A* 3b2k_A* 3b2l_A* 3stk_A* 3stm_X* 3stn_A 3vg2_A* 3vg3_A* 3vg4_A* 3vg5_A* 3vg6_A* 3b2h_A* 2py1_A 2l67_A 2l68_A 2lkk_A* 2ju3_A 2ju7_A 2ju8_A* ...
Probab=45.22 E-value=55 Score=22.38 Aligned_cols=60 Identities=12% Similarity=0.076 Sum_probs=37.2
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEeecccCCCcEEEEEEcCCCcccee
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIRNFDYHEARMIHLSYHDGEHYNGV 89 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~~~~~~~~~~i~L~y~~g~HYdsv 89 (134)
+.||+|++.+. =...+.-++...+-.+.| ..++..+.|... ...+...+.|..|+-++-.
T Consensus 16 eNfdeymkalG------v~~~~rk~~~~~kp~~~I-~~~Gd~~~ikt~--s~~k~~~~~F~lGeEfee~ 75 (132)
T 3vg7_A 16 ENFEAFMKAIG------LPEELIQKGKDIKGVSEI-VQNGKHFKFTIT--AGSKVIQNEFTVGEECELE 75 (132)
T ss_dssp ESHHHHHHHTT------CCHHHHHHHTTCCCEEEE-EEETTEEEEEEE--ETTEEEEEEEETTSEEEEE
T ss_pred cCHHHHHHHhC------CCHHHHHHHHhCCCEEEE-EEcCCEEEEEEE--EcCceEEEEEECCCcEEeE
Confidence 47999999983 346677777777755544 555666666531 2234556666666655544
No 26
>4a1y_A Myelin P2 protein; transport; HET: PLM; 1.20A {Homo sapiens} PDB: 2wut_A* 4a1h_A* 1pmp_A* 1yiv_A*
Probab=43.17 E-value=63 Score=22.09 Aligned_cols=58 Identities=14% Similarity=0.266 Sum_probs=34.8
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEeecccCCCcEEEEEEcCCCccc
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIRNFDYHEARMIHLSYHDGEHYN 87 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~~~~~~~~~~i~L~y~~g~HYd 87 (134)
+.||+|++.| |=...+.-+|...+-.+.| ..++..+.|... ..-+...+.|..|+-++
T Consensus 16 ENfdeylkal------Gv~~~~Rk~a~~~kp~~~I-~~~Gd~~tikt~--s~~k~~~~~F~lGeEfe 73 (133)
T 4a1y_A 16 ENFDDYMKAL------GVGLATRKLGNLAKPTVII-SKKGDIITIRTE--STFKNTEISFQLGQEFE 73 (133)
T ss_dssp ESHHHHHHHH------TCCHHHHHHHHHCCCEEEE-EEETTEEEEEEE--ETTEEEEEEECTTBCEE
T ss_pred cCHHHHHHHc------CCCHHHHHhHhhCCCeEEE-EECCCEEEEEEe--cCCccEEEEEEcCCcEE
Confidence 5899999998 4456777778887755554 455566666531 12233444555444443
No 27
>3e98_A GAF domain of unknown function; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.43A {Pseudomonas aeruginosa}
Probab=42.93 E-value=4.9 Score=30.82 Aligned_cols=32 Identities=16% Similarity=0.171 Sum_probs=0.4
Q ss_pred hHHHHHhCccccccccCCCCCHHHHHHhhcCCCccCCHH
Q 032766 2 VVQYIVKNRETFEPFIEDDVPFDEYCQSMETDGTWAGHM 40 (134)
Q Consensus 2 vv~ym~~n~d~f~~Fi~~~~~~~~Y~~~m~~~g~WGg~i 40 (134)
|++|+++|||+|...-+ -++.|+-+...||.+
T Consensus 36 V~~yL~~~PdFf~~~~~-------Ll~~L~lph~~~~aV 67 (252)
T 3e98_A 36 VAAYLSQHPEFFVEHDE-------LIPELRIPHQPGDAV 67 (252)
T ss_dssp --------------------------------------C
T ss_pred HHHHHHhCCHHHhhCHH-------HHHhCCCCCCCCCcc
Confidence 78999999999887632 355666666666654
No 28
>3p6d_A Fatty acid-binding protein, adipocyte; lipocalin, beta barrel, lipid BI protein; HET: ZGB; 1.06A {Homo sapiens} SCOP: b.60.1.2 PDB: 3p6c_A* 3p6e_A* 3p6f_A* 3p6g_A* 3p6h_A* 3rzy_A 2hnx_A* 3fr4_A* 2nnq_A* 1tow_A* 1tou_A* 3fr2_A* 3fr5_A* 1adl_A* 1alb_A 1lib_A 1lic_A* 1lid_A* 1lie_A* 1lif_A* ...
Probab=42.69 E-value=75 Score=21.89 Aligned_cols=60 Identities=13% Similarity=0.192 Sum_probs=35.6
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEeecccCCCcEEEEEEcCCCcccee
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIRNFDYHEARMIHLSYHDGEHYNGV 89 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~~~~~~~~~~i~L~y~~g~HYdsv 89 (134)
+.||+|++.|. =...+.-++...+..+. +..++..+.|... +..+...+.|..|+-++-.
T Consensus 22 ENfdeymkalG------v~~~~rk~a~~~kp~~~-I~~~Gd~~tikt~--s~~k~~~~~F~lGeEfee~ 81 (139)
T 3p6d_A 22 ENFDDYMKEVG------VGFATRKVAGMAKPNMI-ISVNGDVITIKSE--STFKNTEISFILGQEFDEV 81 (139)
T ss_dssp ESHHHHHHHHT------CCHHHHHHHHHCCCEEE-EEEETTEEEEEEE--CSSCCEEEEECTTCCEEEE
T ss_pred cCHHHHHHHhC------CcHHHHHHHHhCCCeEE-EEEcCCEEEEEEE--eccccEEEEEEcCCcEEee
Confidence 58999999984 33566666777665444 4555666666531 2233445566666555544
No 29
>2a0a_A DER F 13; beta barrel, helix, allergen; NMR {Dermatophagoides farinae} SCOP: b.60.1.2
Probab=40.84 E-value=82 Score=21.32 Aligned_cols=39 Identities=13% Similarity=0.228 Sum_probs=27.5
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEe
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIR 66 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~ 66 (134)
+.||+|+..+. =...+..+|...+-.+.|-+ ++..+.+.
T Consensus 14 eNfdeylkalG------v~~~~rk~a~~~kp~~ei~~-~Gd~~~ik 52 (131)
T 2a0a_A 14 EKFDEFLDKLG------VGFMVKTAAKTLKPTFEVAI-ENDQYIFR 52 (131)
T ss_dssp CSHHHHHHHHT------CCHHHHTGGGTTCCEEEEEE-CSSCEEEE
T ss_pred cCHHHHHHHcC------CCHHHHHHhhcCCceEEEEE-cCCEEEEE
Confidence 58999999983 34677888887776665544 55566665
No 30
>2g7b_A Cellular retinoic acid-binding protein 2; crabpii, retinoids, beta barrel, crystallography, X-RAY, high resolution, schiff base; HET: AZE; 1.18A {Homo sapiens} PDB: 3d97_A* 3fa8_A 3i17_B 3fa7_A* 3fa9_A 3d95_A 3cwk_A 3f8a_A* 3fep_A* 3fek_B 3fa6_A 1bm5_A 1xca_A 3fel_A* 3f9d_A* 3cr6_A* 3fen_A 1blr_A 1cbq_A* 1cbs_A* ...
Probab=40.45 E-value=69 Score=21.88 Aligned_cols=39 Identities=13% Similarity=0.280 Sum_probs=24.3
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHh--hcCccEEEEEcCCCceEEe
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASL--VTHSNICIHRHMSPRWYIR 66 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~--~~~v~I~V~~~~~~~~~i~ 66 (134)
+.||+|++.|. =...+..+|. ..+- ...+..++..+.+.
T Consensus 13 eNfdeylkalG------v~~~~rk~a~~~~~kp-~~ei~~~Gd~~tik 53 (137)
T 2g7b_A 13 ENFEELLKVLG------VNVMLRKIAVAAASKP-AVEIKQEGDTFYIK 53 (137)
T ss_dssp ECHHHHHHHTT------CCHHHHHHHHHHHSSC-EEEEEEETTEEEEE
T ss_pred cCHHHHHHHcC------CCHHHHhhhhcccCCc-eEEEEECCCEEEEE
Confidence 47999999983 2356666666 4554 44444455556554
No 31
>3q6l_A Fatty acid-binding protein, adipocyte; lipid chaperone, lipid binding protein; 1.40A {Homo sapiens} PDB: 2q9s_A* 2qm9_A*
Probab=39.52 E-value=88 Score=22.00 Aligned_cols=60 Identities=15% Similarity=0.226 Sum_probs=35.9
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEeecccCCCcEEEEEEcCCCcccee
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIRNFDYHEARMIHLSYHDGEHYNGV 89 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~~~~~~~~~~i~L~y~~g~HYdsv 89 (134)
+.||+|++.|. =...+.-++...+..+.| ..++..+.|... ...+...+.|..|+=++-.
T Consensus 35 ENfdeymkalG------v~~~~Rk~a~~~kp~~eI-~~~Gd~~tikt~--st~kt~~~~F~lGeEfee~ 94 (152)
T 3q6l_A 35 ENFDDYMKEVG------VGFATRKVAGMAKPNMII-SVNGDVITIKSE--STFKNTEISFILGQEFDEV 94 (152)
T ss_dssp ESHHHHHHHHT------CCHHHHHHHHHCCCEEEE-EEETTEEEEEEE--CSSCCEEEEECTTCCEEEE
T ss_pred cCHHHHHHHhC------CCHHHHHHHHhCCCeEEE-EEcCCEEEEEEE--eccccEEEEEEcCCcEEee
Confidence 58999999984 335666677777655544 445566666531 2233445566666555544
No 32
>1crb_A Cellular retinol binding protein; cellular lipophilic transport protein; HET: RTL; 2.10A {Rattus rattus} SCOP: b.60.1.2 PDB: 1mx7_A 1mx8_A* 1jbh_A 1kgl_A*
Probab=37.47 E-value=95 Score=21.08 Aligned_cols=39 Identities=18% Similarity=0.260 Sum_probs=27.1
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEe
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIR 66 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~ 66 (134)
+.||+|+..+ |=...+..+|...+-.+.|-+ ++..+.+.
T Consensus 14 eNfdeylkal------Gv~~~~rk~a~~~kp~~ei~~-~Gd~~~ik 52 (134)
T 1crb_A 14 ENFEEYLRAL------DVNVALRKIANLLKPDKEIVQ-DGDHMIIR 52 (134)
T ss_dssp ESHHHHHHTT------TCCHHHHHHHHHCCCEEEEEE-ETTEEEEE
T ss_pred cCHHHHHHHc------CCCHHHHHHhhcCCceEEEEE-cCCEEEEE
Confidence 4799999998 334677888888776665544 45556554
No 33
>1b56_A Fatty acid binding protein; lipid-binding, fatty acid transport, beta barrel, lipid binding protein; HET: PLM; 2.05A {Homo sapiens} SCOP: b.60.1.2 PDB: 1jjj_A
Probab=36.83 E-value=98 Score=21.04 Aligned_cols=58 Identities=17% Similarity=0.261 Sum_probs=35.3
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEeecccCCCcEEEEEEcCCCccc
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIRNFDYHEARMIHLSYHDGEHYN 87 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~~~~~~~~~~i~L~y~~g~HYd 87 (134)
+.||+|+..+ |=...+..+|...+-.+.|-+ ++..+.+... ...+...+.|..|+-++
T Consensus 17 eNfdeylkal------Gv~~~~rk~a~~~kp~~ei~~-~Gd~~tikt~--s~~k~~~~~F~lGeEfe 74 (135)
T 1b56_A 17 KGFDEYMKEL------GVGIALRKMGAMAKPDCIITC-DGKNLTIKTE--STLKTTQFSCTLGEKFE 74 (135)
T ss_dssp CSHHHHHHHH------TCCHHHHHHHHHCCCEEEEEE-ETTEEEEEEE--CSSCEEEEEEETTCCEE
T ss_pred cCHHHHHHHc------CCCHHHHHHhhcCCcEEEEEE-cCCEEEEEEE--cCCceEEEEEECCCcEE
Confidence 5899999998 334677888888776665544 4555665431 22334444555554444
No 34
>3elx_A Ileal bIle acid-binding protein; ileal bIle acid-bindign protein, zebrafish, cholic acid, LIP binding, transport, lipid binding protein; 1.60A {Danio rerio} SCOP: b.60.1.0 PDB: 3elz_A* 3em0_A*
Probab=35.95 E-value=66 Score=22.20 Aligned_cols=60 Identities=7% Similarity=0.066 Sum_probs=38.2
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEeecccCC-CcEEEEEEcCCCcccee
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIRNFDYHE-ARMIHLSYHDGEHYNGV 89 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~~~~~~~-~~~i~L~y~~g~HYdsv 89 (134)
+.||+|++.|. =...+.-++...+-.+.| ..++..+.|... .. .+...+.|..|+-++-.
T Consensus 16 ENfdeymkalG------v~~~~Rk~~~~~kp~~~I-~~~Gd~~tikt~--s~~~k~~~~~F~lGeEfee~ 76 (138)
T 3elx_A 16 EGYEPFCKLIG------IPDDVIAKGRDFKLVTEI-VQNGDDFTWTQY--YPNNHVVTNKFIVGKESDME 76 (138)
T ss_dssp ESHHHHHHHTT------CCHHHHHHTTTCCCEEEE-EEETTEEEEEEE--EGGGEEEEEEEETTSCEEEE
T ss_pred cCHHHHHHHhC------CCHHHHhHHhcCCceEEE-EEcCCEEEEEEE--EcCCceEEEEEEcCCcEEee
Confidence 57999999983 346677777777755555 445566666531 22 34566777777666654
No 35
>4a60_A Fatty acid-binding protein 9 testis lipid-binding protein, TLBP, testis-type fatty...; transport protein; 1.53A {Homo sapiens} PDB: 3nr3_A*
Probab=33.80 E-value=1.1e+02 Score=21.53 Aligned_cols=60 Identities=13% Similarity=0.236 Sum_probs=36.1
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEeecccCCCcEEEEEEcCCCcccee
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIRNFDYHEARMIHLSYHDGEHYNGV 89 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~~~~~~~~~~i~L~y~~g~HYdsv 89 (134)
+.||+|++.|. =...+.-++...+..+.| ..++..+.|.. ....+...+.|..|+=++-.
T Consensus 37 ENfdeymkalG------V~~~~Rk~a~~~kp~~eI-~q~Gd~~tikt--~st~kt~~~~F~lGeEfee~ 96 (154)
T 4a60_A 37 ENFEDYMKELG------VNFAARNMAGLVKPTVTI-SVDGKMMTIRT--ESSFQDTKISFKLGEEFDET 96 (154)
T ss_dssp ESHHHHHHHHT------CCHHHHHHHTTSCCEEEE-EEETTEEEEEE--EETTEEEEEEECTTCCEEEE
T ss_pred cCHHHHHHHhC------CCHHHHHHHhcCCceEEE-EEcCCEEEEEE--EcCCceEEEEEECCCcEEeE
Confidence 58999999983 335677777777655555 44556666653 12234555666666555543
No 36
>4a5u_A RNA replicase polyprotein; transferase-RNA binding protein complex, cysteine proteinase; 2.00A {Turnip yellow mosaic virus}
Probab=32.44 E-value=92 Score=22.45 Aligned_cols=49 Identities=10% Similarity=0.110 Sum_probs=34.2
Q ss_pred HHHHHHhhcCccEEEEEcCCCceEEeecccCCCcEEEEEEcCC--CccceeecC
Q 032766 41 ELQAASLVTHSNICIHRHMSPRWYIRNFDYHEARMIHLSYHDG--EHYNGVRLK 92 (134)
Q Consensus 41 EL~Als~~~~v~I~V~~~~~~~~~i~~~~~~~~~~i~L~y~~g--~HYdsv~~~ 92 (134)
.|.|||..|+....|+...+ .+.++. .+....+.|.|.+| .||....+.
T Consensus 107 hltaLa~~~~~~c~~hs~~~-~~~~Gi--~~as~~~~I~ht~G~P~HFs~~~~l 157 (160)
T 4a5u_A 107 HLTALAHLYNFQATVYSDRG-PILFGP--SDTIKRIDITHTTGPPSHFSPGKRL 157 (160)
T ss_dssp HHHHHHHHHTEEEEEEETTE-EEEESC--SSCSEEEEEEEECSSSCEEEESCCC
T ss_pred HHHHHHHHHheEEEEEcCCc-eEEeec--CCCceEEEEEeCCCCCCCccCCccc
Confidence 47899999999999988654 233322 33466889998865 598766543
No 37
>1fdq_A Fatty acid-binding protein, brain; omega-3, long chain poly unsaturated fatty acid, lipid binding protein; HET: HXA; 2.10A {Homo sapiens} SCOP: b.60.1.2 PDB: 1fe3_A* 1jjx_A
Probab=30.29 E-value=1e+02 Score=20.77 Aligned_cols=39 Identities=23% Similarity=0.334 Sum_probs=27.0
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEe
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIR 66 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~ 66 (134)
+.||+|++.+. =...+..+|...+-.+.|-+ ++..+.+.
T Consensus 14 eNfdeylkalG------v~~~~rk~a~~~kp~~ei~~-~Gd~~~ik 52 (131)
T 1fdq_A 14 QNFDEYMKALG------VGFATRQVGNVTKPTVIISQ-EGDKVVIR 52 (131)
T ss_dssp ESHHHHHHHTT------CCHHHHHHHHHCCCEEEEEE-ETTEEEEE
T ss_pred cCHHHHHHHcC------CCHHHHHHHhcCCCeEEEEE-cCCEEEEE
Confidence 47999999983 34677888888776665544 45556554
No 38
>3rsw_A Fatty acid-binding protein, heart; lipid carrier, molecular chaperone, heart fatty acid binding type 2 diabetes, atherosclerosis, chaperone; 2.60A {Homo sapiens} PDB: 1g5w_A 1hmr_A* 1hms_A* 1hmt_A* 2hmb_A* 1bwy_A
Probab=29.12 E-value=1e+02 Score=21.80 Aligned_cols=39 Identities=15% Similarity=0.253 Sum_probs=26.2
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEe
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIR 66 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~ 66 (134)
+.||+|++.|. =...+.-++...+..+.|-+ ++..+.|.
T Consensus 40 ENfdeymkalG------V~~~~Rk~a~~~kp~~eI~q-~Gd~~tik 78 (158)
T 3rsw_A 40 KNFDDYMKSLG------VGFATRQVASMTKPTTIIEK-NGDILTLK 78 (158)
T ss_dssp ESHHHHHHHTT------CCHHHHHHHHHCCCEEEEEE-ETTEEEEE
T ss_pred cCHHHHHHHhC------CCHHHHHHHHhCCCeEEEEE-CCCEEEEE
Confidence 58999999983 34567777777765555544 45556554
No 39
>2lba_A BABP protein; ileal bIle acid binding protein, lipid binding protein; HET: CHO; NMR {Gallus gallus}
Probab=28.50 E-value=55 Score=22.51 Aligned_cols=39 Identities=3% Similarity=-0.063 Sum_probs=26.0
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEe
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIR 66 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~ 66 (134)
+.||+|++.+. =...+..+|...+-.+. +..++..+.+.
T Consensus 17 ENfdeylkalG------v~~~~rk~a~~~kp~~e-i~~~Gd~~tik 55 (136)
T 2lba_A 17 ENYDDFVKKIG------LPADKIEMGRNCKIVTE-VVQNGNDFTWT 55 (136)
T ss_dssp ESHHHHHHHHT------CCHHHHTTTSSCCCEEE-ECEETTEEEEE
T ss_pred cCHHHHHHHhC------CCHHHHHhhccCCcEEE-EEEcCCEEEEE
Confidence 57999999983 34667777777764444 44455556664
No 40
>1ggl_A Protein (cellular retinol-binding protein III); carrier, transport protein; 2.31A {Homo sapiens} SCOP: b.60.1.2
Probab=25.54 E-value=59 Score=22.23 Aligned_cols=39 Identities=15% Similarity=0.347 Sum_probs=25.0
Q ss_pred CCHHHHHHhhcCCCccCCHHHHHHHHhhcCccEEEEEcCCCceEEe
Q 032766 21 VPFDEYCQSMETDGTWAGHMELQAASLVTHSNICIHRHMSPRWYIR 66 (134)
Q Consensus 21 ~~~~~Y~~~m~~~g~WGg~iEL~Als~~~~v~I~V~~~~~~~~~i~ 66 (134)
+.||+|+..|-- ...+..+|...+-.+.| ..++..+.|.
T Consensus 14 eNfdeylkalGv------~~~~rk~a~~~kp~~ei-~~~Gd~~~ik 52 (134)
T 1ggl_A 14 KNMEDYLQALNI------SLAVRKIALLLKPDKEI-EHQGNHMTVR 52 (134)
T ss_dssp ECHHHHHHHTTC------CTTTTTTGGGCCCEEEE-EECSSEEEEE
T ss_pred cCHHHHHHHhCC------CHHHHhhhhcCCcEEEE-EEcCCEEEEE
Confidence 479999999843 23456677777655544 4455566654
No 41
>3sk9_A Putative uncharacterized protein TTHB187; crispr, CAS, HD domain, nuclease, hydrolase; 1.80A {Thermus thermophilus HB8} PDB: 3skd_A
Probab=23.65 E-value=36 Score=26.14 Aligned_cols=26 Identities=15% Similarity=0.436 Sum_probs=20.6
Q ss_pred hHHHHHhCccccccccCCCCCHHHHHHh
Q 032766 2 VVQYIVKNRETFEPFIEDDVPFDEYCQS 29 (134)
Q Consensus 2 vv~ym~~n~d~f~~Fi~~~~~~~~Y~~~ 29 (134)
+||+|-+|.+.| |++.+ ++.++|-+.
T Consensus 208 ~ADWIaSne~~F-P~~~~-~~l~~y~~~ 233 (265)
T 3sk9_A 208 FADWVASDPSLF-PYGRD-PRRGDYLKE 233 (265)
T ss_dssp HHHHHHTCTTTS-CSCCC-TTSTTHHHH
T ss_pred Hhhhhccchhhc-CCCCC-cCHHHHHHH
Confidence 689999999877 77764 577778764
Done!