Query 032780
Match_columns 134
No_of_seqs 136 out of 1464
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 09:09:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032780.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032780hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.6 1.4E-15 4.9E-20 96.2 8.9 67 15-82 1-67 (68)
2 1cc8_A Protein (metallochapero 99.5 7E-14 2.4E-18 88.8 9.7 67 15-81 4-71 (73)
3 3dxs_X Copper-transporting ATP 99.5 8.1E-14 2.8E-18 88.4 9.0 68 15-82 1-72 (74)
4 4a4j_A Pacszia, cation-transpo 99.5 1.4E-13 4.9E-18 86.0 9.8 64 16-79 2-68 (69)
5 3fry_A Probable copper-exporti 99.5 1.2E-13 4.1E-18 88.2 8.2 67 14-82 3-70 (73)
6 2crl_A Copper chaperone for su 99.4 1.1E-12 3.6E-17 89.3 10.0 70 15-84 18-87 (98)
7 2xmm_A SSR2857 protein, ATX1; 99.3 3.3E-12 1.1E-16 77.1 6.6 60 18-77 3-63 (64)
8 2roe_A Heavy metal binding pro 99.3 3.7E-12 1.3E-16 78.5 6.5 62 19-80 3-65 (66)
9 2xmw_A PACS-N, cation-transpor 99.3 1.9E-11 6.4E-16 75.1 9.7 64 16-79 3-69 (71)
10 2l3m_A Copper-ION-binding prot 99.3 2.4E-11 8E-16 75.0 10.1 64 14-77 3-70 (71)
11 1mwy_A ZNTA; open-faced beta-s 99.3 2E-11 6.9E-16 76.3 9.9 66 15-80 2-69 (73)
12 1aw0_A Menkes copper-transport 99.3 1.9E-11 6.6E-16 75.4 8.7 65 16-80 3-71 (72)
13 1osd_A MERP, hypothetical prot 99.3 3.1E-11 1.1E-15 74.4 9.6 64 16-79 3-70 (72)
14 2k2p_A Uncharacterized protein 99.3 7.4E-12 2.5E-16 82.9 6.7 64 14-77 20-84 (85)
15 3cjk_B Copper-transporting ATP 99.3 4.4E-11 1.5E-15 74.8 9.8 66 16-81 2-71 (75)
16 1y3j_A Copper-transporting ATP 99.3 1.4E-11 4.9E-16 77.8 7.5 68 14-81 1-72 (77)
17 2qif_A Copper chaperone COPZ; 99.3 5.7E-11 2E-15 71.6 9.7 62 16-77 2-67 (69)
18 2kt2_A Mercuric reductase; nme 99.2 3.8E-11 1.3E-15 73.8 7.9 62 19-80 3-67 (69)
19 2g9o_A Copper-transporting ATP 99.2 6E-11 2.1E-15 78.5 9.3 69 16-84 3-78 (90)
20 1q8l_A Copper-transporting ATP 99.2 4.6E-11 1.6E-15 77.3 8.5 68 15-82 8-79 (84)
21 1kvi_A Copper-transporting ATP 99.2 4.4E-11 1.5E-15 75.7 8.2 68 14-81 6-77 (79)
22 1cpz_A Protein (COPZ); copper 99.2 6E-11 2.1E-15 72.2 8.5 61 19-79 3-67 (68)
23 1opz_A Potential copper-transp 99.2 7.4E-11 2.5E-15 73.1 8.8 67 14-80 4-74 (76)
24 1fvq_A Copper-transporting ATP 99.2 6.8E-11 2.3E-15 72.9 8.5 65 17-81 3-70 (72)
25 2ofg_X Zinc-transporting ATPas 99.2 3.1E-10 1.1E-14 78.1 12.4 67 14-80 6-76 (111)
26 1jww_A Potential copper-transp 99.2 1E-10 3.4E-15 73.7 8.8 68 15-82 2-73 (80)
27 1yg0_A COP associated protein; 99.2 7.3E-11 2.5E-15 71.4 7.4 60 18-77 3-65 (66)
28 2ldi_A Zinc-transporting ATPas 99.2 1.1E-10 3.8E-15 71.1 8.0 63 16-78 3-69 (71)
29 2kyz_A Heavy metal binding pro 99.2 4.7E-11 1.6E-15 73.8 6.3 60 18-79 3-63 (67)
30 1yjr_A Copper-transporting ATP 99.2 1.1E-10 3.6E-15 72.6 7.6 65 16-80 4-72 (75)
31 1qup_A Superoxide dismutase 1 99.2 1.6E-10 5.5E-15 89.8 10.3 69 16-84 6-74 (222)
32 1p6t_A Potential copper-transp 99.2 1.6E-10 5.6E-15 81.5 8.7 70 15-84 73-146 (151)
33 2kkh_A Putative heavy metal tr 99.1 4.7E-10 1.6E-14 74.3 9.7 69 14-82 14-86 (95)
34 2ew9_A Copper-transporting ATP 99.1 2E-10 7E-15 80.5 8.2 64 16-79 80-147 (149)
35 1jk9_B CCS, copper chaperone f 99.1 5.1E-10 1.8E-14 88.5 8.9 68 16-83 7-74 (249)
36 2rop_A Copper-transporting ATP 99.0 1.9E-09 6.4E-14 80.6 9.5 67 16-82 122-192 (202)
37 2aj0_A Probable cadmium-transp 99.0 1.2E-09 4.1E-14 67.9 6.5 58 16-77 3-61 (71)
38 2ew9_A Copper-transporting ATP 98.9 3.6E-09 1.2E-13 74.1 8.2 67 15-81 3-73 (149)
39 2rop_A Copper-transporting ATP 98.7 5.6E-08 1.9E-12 72.5 8.3 65 14-78 18-89 (202)
40 3j09_A COPA, copper-exporting 98.7 9E-08 3.1E-12 84.9 9.6 64 17-80 3-70 (723)
41 1p6t_A Potential copper-transp 98.7 1.3E-07 4.3E-12 66.5 8.6 62 16-77 6-71 (151)
42 3cq1_A Putative uncharacterize 82.7 1.3 4.5E-05 29.4 3.7 35 17-51 42-82 (103)
43 1uwd_A Hypothetical protein TM 82.4 1.1 3.8E-05 29.8 3.2 35 17-51 43-83 (103)
44 3lno_A Putative uncharacterize 80.7 1.4 4.7E-05 29.7 3.2 36 17-52 45-87 (108)
45 4gwb_A Peptide methionine sulf 75.3 6.2 0.00021 29.1 5.6 44 27-70 9-70 (168)
46 2x3d_A SSO6206; unknown functi 74.0 10 0.00035 25.6 5.9 65 16-81 5-79 (96)
47 2jsx_A Protein NAPD; TAT, proo 73.8 17 0.00057 24.0 7.9 46 27-72 16-62 (95)
48 1jdq_A TM006 protein, hypothet 72.4 18 0.00062 23.9 7.2 54 18-80 27-83 (98)
49 3bpd_A Uncharacterized protein 71.9 12 0.0004 25.4 5.9 66 15-81 6-80 (100)
50 1fvg_A Peptide methionine sulf 67.7 10 0.00035 28.7 5.4 46 27-72 50-117 (199)
51 3bqh_A PILB, peptide methionin 65.9 10 0.00036 28.5 5.1 44 27-70 9-74 (193)
52 2j89_A Methionine sulfoxide re 63.8 11 0.00038 29.7 5.1 44 27-70 101-166 (261)
53 1nwa_A Peptide methionine sulf 61.6 13 0.00046 28.2 5.0 44 27-70 32-93 (203)
54 1ff3_A Peptide methionine sulf 61.6 14 0.00047 28.2 5.2 46 27-72 49-116 (211)
55 2raq_A Conserved protein MTH88 54.9 39 0.0013 22.7 5.9 67 14-81 5-80 (97)
56 3e0m_A Peptide methionine sulf 54.2 20 0.00067 29.0 5.1 44 27-70 9-72 (313)
57 3lvj_C Sulfurtransferase TUSA; 53.8 38 0.0013 21.2 6.9 54 18-80 11-67 (82)
58 1je3_A EC005, hypothetical 8.6 48.6 33 0.0011 22.6 4.8 55 17-80 27-84 (97)
59 3hz7_A Uncharacterized protein 44.4 48 0.0017 21.1 5.0 53 20-80 4-59 (87)
60 2nyt_A Probable C->U-editing e 33.1 44 0.0015 24.7 3.8 60 17-81 84-146 (190)
61 3pim_A Peptide methionine sulf 32.7 26 0.00089 26.2 2.5 27 27-53 26-54 (187)
62 1t1v_A SH3BGRL3, SH3 domain-bi 31.8 43 0.0015 20.7 3.2 34 17-51 3-41 (93)
63 3kf9_B MLCK2, myosin light cha 27.1 18 0.0006 18.0 0.5 7 123-129 3-9 (22)
64 2khp_A Glutaredoxin; thioredox 26.0 1E+02 0.0034 18.5 4.1 33 15-49 5-37 (92)
65 2yy3_A Elongation factor 1-bet 25.7 1E+02 0.0034 20.2 4.2 35 16-50 51-87 (91)
66 3v4k_A DNA DC->DU-editing enzy 25.5 2.1E+02 0.0072 21.5 6.5 63 16-82 100-163 (203)
67 1pav_A Hypothetical protein TA 22.5 58 0.002 19.9 2.5 51 19-78 8-61 (78)
68 3pro_C Alpha-lytic protease; P 22.2 1.4E+02 0.0047 21.6 4.8 35 41-75 114-149 (166)
69 2y9j_Y Lipoprotein PRGK, prote 21.9 69 0.0024 23.1 3.1 24 28-51 88-111 (170)
70 2k1h_A Uncharacterized protein 21.8 1.7E+02 0.006 19.0 5.4 42 27-71 36-79 (94)
71 1yj7_A ESCJ; mixed alpha/beta, 21.7 70 0.0024 23.1 3.1 22 30-51 92-113 (171)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.63 E-value=1.4e-15 Score=96.19 Aligned_cols=67 Identities=21% Similarity=0.353 Sum_probs=62.3
Q ss_pred ceEEEEEEeccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEeeCCHHHHHHHHHhCCCceEEcCC
Q 032780 15 AQYVELMVPLYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGICNKYDVLETIRSKRKEARFWNQ 82 (134)
Q Consensus 15 ~~~v~l~V~M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~~~~~eI~~~I~k~G~~a~~~~~ 82 (134)
|.+++|.|+|+|.+|+.+|+++|++++|| ++++|+.+++++|.+..++++|.++|+++||.+.+++.
T Consensus 1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 35678888999999999999999999999 99999999999999989999999999999999998764
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.53 E-value=7e-14 Score=88.83 Aligned_cols=67 Identities=25% Similarity=0.344 Sum_probs=62.1
Q ss_pred ceEEEEEEeccCHhhHHHHHHHhhCCC-CeeEEEEecCCCEEEEEeeCCHHHHHHHHHhCCCceEEcC
Q 032780 15 AQYVELMVPLYSHGCERKVKKTLTHLK-GIYSVNVDYDQQKVIVWGICNKYDVLETIRSKRKEARFWN 81 (134)
Q Consensus 15 ~~~v~l~V~M~C~~C~~kIek~L~~l~-GV~~v~Vd~~~~kVtV~~~~~~~eI~~~I~k~G~~a~~~~ 81 (134)
+.+++|.|+|+|.+|+.+|+++|++++ ||.++.+|+.+++++|.+..+.++|.+.|+++||.+.++.
T Consensus 4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (73)
T 1cc8_A 4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK 71 (73)
T ss_dssp CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence 456778899999999999999999999 9999999999999999988899999999999999987764
No 3
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.52 E-value=8.1e-14 Score=88.41 Aligned_cols=68 Identities=19% Similarity=0.277 Sum_probs=61.8
Q ss_pred ceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEEcCC
Q 032780 15 AQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARFWNQ 82 (134)
Q Consensus 15 ~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~~~~ 82 (134)
|++++|.|. |+|.+|+.+|+++|++++||..+.||+.+++++|..+ ++.++|.++|+++||.++++..
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 72 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILAE 72 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEccC
Confidence 567889995 9999999999999999999999999999999999753 6899999999999999987753
No 4
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.51 E-value=1.4e-13 Score=85.99 Aligned_cols=64 Identities=16% Similarity=0.359 Sum_probs=59.5
Q ss_pred eEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEE--eeCCHHHHHHHHHhCCCceEE
Q 032780 16 QYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVW--GICNKYDVLETIRSKRKEARF 79 (134)
Q Consensus 16 ~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~--~~~~~~eI~~~I~k~G~~a~~ 79 (134)
++++|.|+ |+|.+|+.+|+++|++++||..+.+|+.+++++|. ...+.++|.++|++.||.+++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV 68 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEe
Confidence 57889996 99999999999999999999999999999999998 457899999999999999875
No 5
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.49 E-value=1.2e-13 Score=88.19 Aligned_cols=67 Identities=19% Similarity=0.264 Sum_probs=62.3
Q ss_pred cceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEeeCCHHHHHHHHHhCCCceEEcCC
Q 032780 14 EAQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGICNKYDVLETIRSKRKEARFWNQ 82 (134)
Q Consensus 14 ~~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~~~~~eI~~~I~k~G~~a~~~~~ 82 (134)
.|++++|.|. |+|.+|+.+|+++|++ +||..+.||+.+++++|..+ +.++|.++|+++||.+.+..+
T Consensus 3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~ 70 (73)
T 3fry_A 3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS 70 (73)
T ss_dssp CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence 4678899996 9999999999999999 99999999999999999988 999999999999999988764
No 6
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=1.1e-12 Score=89.30 Aligned_cols=70 Identities=20% Similarity=0.304 Sum_probs=64.4
Q ss_pred ceEEEEEEeccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEeeCCHHHHHHHHHhCCCceEEcCCCC
Q 032780 15 AQYVELMVPLYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGICNKYDVLETIRSKRKEARFWNQEG 84 (134)
Q Consensus 15 ~~~v~l~V~M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~~~~~eI~~~I~k~G~~a~~~~~~~ 84 (134)
+.+++|+|+|+|.+|+.+|+++|.+++||..+.||+.+++++|.+..+.++|.++|+++||.+.++....
T Consensus 18 ~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 87 (98)
T 2crl_A 18 LCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGS 87 (98)
T ss_dssp CEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCC
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCC
Confidence 4567888999999999999999999999999999999999999988899999999999999998876544
No 7
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.33 E-value=3.3e-12 Score=77.06 Aligned_cols=60 Identities=23% Similarity=0.343 Sum_probs=55.8
Q ss_pred EEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEeeCCHHHHHHHHHhCCCce
Q 032780 18 VELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGICNKYDVLETIRSKRKEA 77 (134)
Q Consensus 18 v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~~~~~eI~~~I~k~G~~a 77 (134)
+.|.|. |+|.+|+.+|++.|.+++||..+.+|+.+++++|.+..+.++|.+.|+++||.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 468895 999999999999999999999999999999999997788999999999999964
No 8
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.32 E-value=3.7e-12 Score=78.48 Aligned_cols=62 Identities=19% Similarity=0.360 Sum_probs=56.5
Q ss_pred EEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEeeCCHHHHHHHHHhCCCceEEc
Q 032780 19 ELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGICNKYDVLETIRSKRKEARFW 80 (134)
Q Consensus 19 ~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~~~~~eI~~~I~k~G~~a~~~ 80 (134)
.|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+..+.++|.+.|+++||.+..+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~ 65 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL 65 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence 47885 999999999999999999999999999999999966678899999999999987653
No 9
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.32 E-value=1.9e-11 Score=75.12 Aligned_cols=64 Identities=14% Similarity=0.310 Sum_probs=57.0
Q ss_pred eEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee--CCHHHHHHHHHhCCCceEE
Q 032780 16 QYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI--CNKYDVLETIRSKRKEARF 79 (134)
Q Consensus 16 ~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~--~~~~eI~~~I~k~G~~a~~ 79 (134)
+++.|.|. |+|.+|+.+|++.|.+++||..+.+|+.+++++|..+ .+.++|.+.|+++||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~ 69 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV 69 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCcee
Confidence 56778996 9999999999999999999999999999999999753 5788899999999998765
No 10
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.32 E-value=2.4e-11 Score=75.00 Aligned_cols=64 Identities=17% Similarity=0.252 Sum_probs=57.5
Q ss_pred cceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCce
Q 032780 14 EAQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEA 77 (134)
Q Consensus 14 ~~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a 77 (134)
.+.++.|.|. |+|.+|+.+|++.|.+++||..+.+|+..++++|..+ ++.++|.+.|.++||.+
T Consensus 3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 3567889996 9999999999999999999999999999999999743 57889999999999964
No 11
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.32 E-value=2e-11 Score=76.35 Aligned_cols=66 Identities=20% Similarity=0.237 Sum_probs=58.1
Q ss_pred ceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEeeC-CHHHHHHHHHhCCCceEEc
Q 032780 15 AQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGIC-NKYDVLETIRSKRKEARFW 80 (134)
Q Consensus 15 ~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~~-~~~eI~~~I~k~G~~a~~~ 80 (134)
|.++.|.|. |+|.+|+.+|++.|.+++||..+.+|+.+++++|..+. ..++|.+.|.++||.+...
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE 69 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEEC
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccc
Confidence 456789996 99999999999999999999999999999999998542 3678999999999987654
No 12
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.29 E-value=1.9e-11 Score=75.43 Aligned_cols=65 Identities=12% Similarity=0.133 Sum_probs=58.0
Q ss_pred eEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEEc
Q 032780 16 QYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARFW 80 (134)
Q Consensus 16 ~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~~ 80 (134)
++..|.|. |+|.+|+.+|++.|.+++||..+.+|+.+++++|..+ .+.++|.+.|+++||.+.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS 71 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence 46789995 9999999999999999999999999999999999854 57889999999999987653
No 13
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.29 E-value=3.1e-11 Score=74.44 Aligned_cols=64 Identities=20% Similarity=0.334 Sum_probs=57.5
Q ss_pred eEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEE
Q 032780 16 QYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARF 79 (134)
Q Consensus 16 ~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~ 79 (134)
+++.|.|. |+|.+|+.+|++.|.+++||..+.+|+.+++++|..+ .+.++|.+.|.++||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence 56778995 9999999999999999999999999999999999753 5788999999999998754
No 14
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.28 E-value=7.4e-12 Score=82.91 Aligned_cols=64 Identities=16% Similarity=0.208 Sum_probs=58.2
Q ss_pred cceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEeeCCHHHHHHHHHhCCCce
Q 032780 14 EAQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGICNKYDVLETIRSKRKEA 77 (134)
Q Consensus 14 ~~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~~~~~eI~~~I~k~G~~a 77 (134)
.+.++.|.|. |+|.+|+.+|+++|.+++||..+.||+.+++++|...++.++|.++|+++||.+
T Consensus 20 ~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 20 QGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP 84 (85)
T ss_dssp --CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred cccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 4567789995 999999999999999999999999999999999998888999999999999964
No 15
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.28 E-value=4.4e-11 Score=74.83 Aligned_cols=66 Identities=14% Similarity=0.244 Sum_probs=58.5
Q ss_pred eEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEEcC
Q 032780 16 QYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARFWN 81 (134)
Q Consensus 16 ~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~~~ 81 (134)
.++.|.|. |+|.+|+.+|++.|.+++||..+.+|+.+++++|..+ .+.++|.+.|.++||.+.+..
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (75)
T 3cjk_B 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 71 (75)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence 35678895 9999999999999999999999999999999999753 578899999999999887654
No 16
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.27 E-value=1.4e-11 Score=77.78 Aligned_cols=68 Identities=21% Similarity=0.188 Sum_probs=60.6
Q ss_pred cceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEEcC
Q 032780 14 EAQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARFWN 81 (134)
Q Consensus 14 ~~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~~~ 81 (134)
+|+++.|.|. |+|.+|+.+|++.|.+++||..+.+|+.+++++|..+ ++.++|.+.|.++||.+.++.
T Consensus 1 ~m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 1 NSSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE 72 (77)
T ss_dssp CCEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred CCEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence 3677889995 9999999999999999999999999999999999753 577899999999999887654
No 17
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.27 E-value=5.7e-11 Score=71.62 Aligned_cols=62 Identities=21% Similarity=0.304 Sum_probs=55.6
Q ss_pred eEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCce
Q 032780 16 QYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEA 77 (134)
Q Consensus 16 ~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a 77 (134)
.+..|.|. |+|.+|+.+|++.|..++||..+.+|+..++++|..+ .+.++|.+.|.++||.+
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 45678996 9999999999999999999999999999999999753 57889999999999964
No 18
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.24 E-value=3.8e-11 Score=73.80 Aligned_cols=62 Identities=16% Similarity=0.243 Sum_probs=55.4
Q ss_pred EEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee--CCHHHHHHHHHhCCCceEEc
Q 032780 19 ELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI--CNKYDVLETIRSKRKEARFW 80 (134)
Q Consensus 19 ~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~--~~~~eI~~~I~k~G~~a~~~ 80 (134)
.|.|. |+|.+|+.+|+++|.+++||..+.+|+..++++|..+ .+.++|.+.|+++||.+.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 67 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA 67 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence 47885 9999999999999999999999999999999999753 57889999999999987643
No 19
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.23 E-value=6e-11 Score=78.53 Aligned_cols=69 Identities=13% Similarity=0.189 Sum_probs=59.5
Q ss_pred eEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEe---eCCHHHHHHHHHhC---CCceEEcCCCC
Q 032780 16 QYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWG---ICNKYDVLETIRSK---RKEARFWNQEG 84 (134)
Q Consensus 16 ~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~---~~~~~eI~~~I~k~---G~~a~~~~~~~ 84 (134)
.++.|.|. |+|.+|+.+|+++|.+++||..+.||+.+++++|.. .++.++|.++|.++ ||.+.++.+..
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~~ 78 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEVE 78 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC-
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCCc
Confidence 35678996 999999999999999999999999999999999975 35778999999999 59887766543
No 20
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.23 E-value=4.6e-11 Score=77.34 Aligned_cols=68 Identities=16% Similarity=0.251 Sum_probs=60.2
Q ss_pred ceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEEcCC
Q 032780 15 AQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARFWNQ 82 (134)
Q Consensus 15 ~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~~~~ 82 (134)
..++.|.|. |+|.+|+.+|++.|.+++||..+.+|+.+++++|..+ ++.++|.+.|.++||.+.+...
T Consensus 8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 79 (84)
T 1q8l_A 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ 79 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCC
Confidence 356789995 9999999999999999999999999999999999853 5788999999999998876554
No 21
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.23 E-value=4.4e-11 Score=75.70 Aligned_cols=68 Identities=13% Similarity=0.234 Sum_probs=59.9
Q ss_pred cceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEEcC
Q 032780 14 EAQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARFWN 81 (134)
Q Consensus 14 ~~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~~~ 81 (134)
...++.|.|. |+|.+|+.+|+++|.+++||..+.+|+.+++++|..+ .+.++|.+.|+++||.+.+..
T Consensus 6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 77 (79)
T 1kvi_A 6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 77 (79)
T ss_dssp TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence 3567789995 9999999999999999999999999999999999753 577899999999999876643
No 22
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.23 E-value=6e-11 Score=72.21 Aligned_cols=61 Identities=16% Similarity=0.307 Sum_probs=55.3
Q ss_pred EEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEE
Q 032780 19 ELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARF 79 (134)
Q Consensus 19 ~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~ 79 (134)
.|.|. |+|.+|+.+|++.|.+++||..+.+|+.+++++|..+ .+.++|.+.|++.||.+..
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence 57885 9999999999999999999999999999999999853 5788999999999998764
No 23
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.22 E-value=7.4e-11 Score=73.12 Aligned_cols=67 Identities=18% Similarity=0.253 Sum_probs=59.1
Q ss_pred cceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEe---eCCHHHHHHHHHhCCCceEEc
Q 032780 14 EAQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWG---ICNKYDVLETIRSKRKEARFW 80 (134)
Q Consensus 14 ~~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~---~~~~~eI~~~I~k~G~~a~~~ 80 (134)
.+.+..|.|. |+|.+|+.+|++.|.+++||..+.+|+..++++|.. ..+.++|.+.|.++||.+..+
T Consensus 4 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 74 (76)
T 1opz_A 4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE 74 (76)
T ss_dssp CCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred cceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence 3567789996 999999999999999999999999999999999974 357889999999999987654
No 24
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.22 E-value=6.8e-11 Score=72.89 Aligned_cols=65 Identities=17% Similarity=0.195 Sum_probs=58.1
Q ss_pred EEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee--CCHHHHHHHHHhCCCceEEcC
Q 032780 17 YVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI--CNKYDVLETIRSKRKEARFWN 81 (134)
Q Consensus 17 ~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~--~~~~eI~~~I~k~G~~a~~~~ 81 (134)
++.|.|. |+|.+|+.+|++.|.+++||..+.+|+.+++++|..+ .+.++|.+.|++.||.+.++.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 4578895 9999999999999999999999999999999999753 567899999999999987663
No 25
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.21 E-value=3.1e-10 Score=78.09 Aligned_cols=67 Identities=16% Similarity=0.164 Sum_probs=59.9
Q ss_pred cceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEEc
Q 032780 14 EAQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARFW 80 (134)
Q Consensus 14 ~~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~~ 80 (134)
.+.++.|.|. |+|.+|+.+|+++|++++||..+.||+.+++++|..+ ++.++|.+.|.++||.+...
T Consensus 6 ~~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~~ 76 (111)
T 2ofg_X 6 PLKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAEP 76 (111)
T ss_dssp CCEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEECC
T ss_pred cceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeeec
Confidence 4577889996 9999999999999999999999999999999999854 57789999999999987654
No 26
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.21 E-value=1e-10 Score=73.67 Aligned_cols=68 Identities=15% Similarity=0.285 Sum_probs=59.8
Q ss_pred ceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEEcCC
Q 032780 15 AQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARFWNQ 82 (134)
Q Consensus 15 ~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~~~~ 82 (134)
|.+..|.|. |+|.+|+.+|++.|.+++||..+.+|+.+++++|..+ .+.++|.+.|.++||.+.+...
T Consensus 2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~ 73 (80)
T 1jww_A 2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE 73 (80)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECCS
T ss_pred ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecCc
Confidence 456779996 9999999999999999999999999999999999753 5788899999999998877544
No 27
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.19 E-value=7.3e-11 Score=71.44 Aligned_cols=60 Identities=18% Similarity=0.318 Sum_probs=54.0
Q ss_pred EEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee--CCHHHHHHHHHhCCCce
Q 032780 18 VELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI--CNKYDVLETIRSKRKEA 77 (134)
Q Consensus 18 v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~--~~~~eI~~~I~k~G~~a 77 (134)
..|.|. |+|.+|+.+|++.|.+++||..+.+|+.+++++|..+ .+.++|.+.|+++||.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 3 ATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence 468885 9999999999999999999999999999999999753 47789999999999964
No 28
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.18 E-value=1.1e-10 Score=71.06 Aligned_cols=63 Identities=16% Similarity=0.236 Sum_probs=56.1
Q ss_pred eEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceE
Q 032780 16 QYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEAR 78 (134)
Q Consensus 16 ~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~ 78 (134)
.+..|.|. |+|.+|+.+|++.|.+++||..+.+|+.+++++|..+ .+.+++.+.|.++||.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 55678996 9999999999999999999999999999999999753 567889999999999753
No 29
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.18 E-value=4.7e-11 Score=73.77 Aligned_cols=60 Identities=23% Similarity=0.342 Sum_probs=53.8
Q ss_pred EEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEeeCCHHHHHHHHHhCCCceEE
Q 032780 18 VELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGICNKYDVLETIRSKRKEARF 79 (134)
Q Consensus 18 v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~~~~~eI~~~I~k~G~~a~~ 79 (134)
..|.|. |+|.+|+.+|+++|.++ ||..+.+|+.+++++|..+.+ ++|.+.|+++||.+..
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~ 63 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVES 63 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCB
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceee
Confidence 468895 99999999999999999 999999999999999987655 8899999999997643
No 30
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.17 E-value=1.1e-10 Score=72.57 Aligned_cols=65 Identities=25% Similarity=0.304 Sum_probs=56.9
Q ss_pred eEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEEc
Q 032780 16 QYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARFW 80 (134)
Q Consensus 16 ~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~~ 80 (134)
.++.|.|. |+|.+|+.+|++.|.+++||..+.+|+.+++++|..+ ++.++|.+.|.++||.+.+.
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLV 72 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEES
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceee
Confidence 34678896 9999999999999999999999999999999999854 45688999999999987653
No 31
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.17 E-value=1.6e-10 Score=89.82 Aligned_cols=69 Identities=23% Similarity=0.333 Sum_probs=63.3
Q ss_pred eEEEEEEeccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEeeCCHHHHHHHHHhCCCceEEcCCCC
Q 032780 16 QYVELMVPLYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGICNKYDVLETIRSKRKEARFWNQEG 84 (134)
Q Consensus 16 ~~v~l~V~M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~~~~~eI~~~I~k~G~~a~~~~~~~ 84 (134)
.+++|.|+|+|.+|+.+|+++|++++||.++.||+.+++++|.+..+.++|.++|+++||.+.++....
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~ 74 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGK 74 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCSC
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCCC
Confidence 456788889999999999999999999999999999999999988899999999999999998876544
No 32
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.15 E-value=1.6e-10 Score=81.52 Aligned_cols=70 Identities=14% Similarity=0.285 Sum_probs=61.9
Q ss_pred ceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEEcCCCC
Q 032780 15 AQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARFWNQEG 84 (134)
Q Consensus 15 ~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~~~~~~ 84 (134)
..++.|.|. |+|.+|+.+|+++|.+++||..+.+|+.+++++|..+ ++.++|.+.|+++||.+.++..+.
T Consensus 73 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 146 (151)
T 1p6t_A 73 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQD 146 (151)
T ss_dssp CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSSS
T ss_pred ccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCccc
Confidence 356789995 9999999999999999999999999999999999853 688999999999999988765543
No 33
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.13 E-value=4.7e-10 Score=74.34 Aligned_cols=69 Identities=17% Similarity=0.159 Sum_probs=61.1
Q ss_pred cceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEEcCC
Q 032780 14 EAQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARFWNQ 82 (134)
Q Consensus 14 ~~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~~~~ 82 (134)
.+.++.|.|. |+|.+|+.+|++.|..++||..+.+|+..++++|..+ ++.++|...|..+||.+.+...
T Consensus 14 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 86 (95)
T 2kkh_A 14 KLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVN 86 (95)
T ss_dssp CSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCC
T ss_pred ceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecC
Confidence 4667889995 9999999999999999999999999999999999853 4788899999999998876544
No 34
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.13 E-value=2e-10 Score=80.51 Aligned_cols=64 Identities=20% Similarity=0.274 Sum_probs=58.1
Q ss_pred eEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEE
Q 032780 16 QYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARF 79 (134)
Q Consensus 16 ~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~ 79 (134)
.++.|.|. |+|.+|+.+|+++|++++||..+.+|+.+++++|..+ ++.++|.++|+++||.+.+
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 147 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASL 147 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEEC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEe
Confidence 46789995 9999999999999999999999999999999999853 5789999999999998764
No 35
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.06 E-value=5.1e-10 Score=88.50 Aligned_cols=68 Identities=24% Similarity=0.344 Sum_probs=62.2
Q ss_pred eEEEEEEeccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEeeCCHHHHHHHHHhCCCceEEcCCC
Q 032780 16 QYVELMVPLYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGICNKYDVLETIRSKRKEARFWNQE 83 (134)
Q Consensus 16 ~~v~l~V~M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~~~~~eI~~~I~k~G~~a~~~~~~ 83 (134)
.+++|.|.|+|.+|+.+|+++|++++||.++.||+.+++++|....+.++|.++|+++||.+.++...
T Consensus 7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~ 74 (249)
T 1jk9_B 7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAG 74 (249)
T ss_dssp EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEES
T ss_pred eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCC
Confidence 45678888999999999999999999999999999999999998889999999999999998876543
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.01 E-value=1.9e-09 Score=80.56 Aligned_cols=67 Identities=12% Similarity=0.209 Sum_probs=59.1
Q ss_pred eEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEEcCC
Q 032780 16 QYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARFWNQ 82 (134)
Q Consensus 16 ~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~~~~ 82 (134)
.++.|.|. |+|.+|+.+|+++|.+++||..+.||+.+++++|..+ ++.++|.+.|.++||.+.++..
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 192 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSE 192 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC--
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCC
Confidence 46789995 9999999999999999999999999999999999753 5789999999999999877654
No 37
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.98 E-value=1.2e-09 Score=67.87 Aligned_cols=58 Identities=16% Similarity=0.320 Sum_probs=50.5
Q ss_pred eEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEeeCCHHHHHHHHHhCCCce
Q 032780 16 QYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGICNKYDVLETIRSKRKEA 77 (134)
Q Consensus 16 ~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~~~~~eI~~~I~k~G~~a 77 (134)
.+..|.|. |+|.+|+.+|++.|.+++||..+.+|+..++++|..+.+ ...|.++||.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~ 61 (71)
T 2aj0_A 3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFE 61 (71)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTT
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCc
Confidence 35678996 999999999999999999999999999999999987654 45778889864
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.94 E-value=3.6e-09 Score=74.07 Aligned_cols=67 Identities=18% Similarity=0.171 Sum_probs=59.2
Q ss_pred ceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEEcC
Q 032780 15 AQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARFWN 81 (134)
Q Consensus 15 ~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~~~ 81 (134)
|+++.|.|. |+|.+|+.+|++.|.+++||..+.+|+.++++.|..+ .+.+++.+.|.+.||.+.+..
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 73 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVME 73 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeec
Confidence 567889995 9999999999999999999999999999999999752 567899999999999876543
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.70 E-value=5.6e-08 Score=72.46 Aligned_cols=65 Identities=12% Similarity=0.202 Sum_probs=55.4
Q ss_pred cceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCC---CceE
Q 032780 14 EAQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKR---KEAR 78 (134)
Q Consensus 14 ~~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G---~~a~ 78 (134)
.+.++.|.|. |+|.+|+.+|+++|.+++||..+.||+..++++|..+ ++.++|.+.|+++| |.+.
T Consensus 18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~ 89 (202)
T 2rop_A 18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVS 89 (202)
T ss_dssp --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEE
T ss_pred ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEE
Confidence 4567789996 9999999999999999999999999999999999753 57788999999983 5553
No 40
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.65 E-value=9e-08 Score=84.87 Aligned_cols=64 Identities=11% Similarity=0.080 Sum_probs=57.7
Q ss_pred EEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCceEEc
Q 032780 17 YVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEARFW 80 (134)
Q Consensus 17 ~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a~~~ 80 (134)
+++|+|+ |+|.+|+.+||+.|++++||.+++||+.+++++|..+ ++.+++.++|++.||++...
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~~ 70 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVDE 70 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESSC
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccccc
Confidence 4578996 9999999999999999999999999999999999753 68899999999999987543
No 41
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.65 E-value=1.3e-07 Score=66.45 Aligned_cols=62 Identities=18% Similarity=0.277 Sum_probs=54.6
Q ss_pred eEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee---CCHHHHHHHHHhCCCce
Q 032780 16 QYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI---CNKYDVLETIRSKRKEA 77 (134)
Q Consensus 16 ~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~---~~~~eI~~~I~k~G~~a 77 (134)
.+..|.|. |+|.+|+.+|++.|.+++||..+.+|+..++++|..+ .+..++.+.+++.||.+
T Consensus 6 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (151)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred eEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence 45678896 9999999999999999999999999999999998643 56788999999999854
No 42
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=82.67 E-value=1.3 Score=29.44 Aligned_cols=35 Identities=26% Similarity=0.493 Sum_probs=27.0
Q ss_pred EEEEEEeccCHhhH------HHHHHHhhCCCCeeEEEEecC
Q 032780 17 YVELMVPLYSHGCE------RKVKKTLTHLKGIYSVNVDYD 51 (134)
Q Consensus 17 ~v~l~V~M~C~~C~------~kIek~L~~l~GV~~v~Vd~~ 51 (134)
.+.+.+.+++++|. ..|+.+|.+++||..++|++.
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 45566667777774 568999999999999988754
No 43
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=82.36 E-value=1.1 Score=29.76 Aligned_cols=35 Identities=14% Similarity=0.466 Sum_probs=25.6
Q ss_pred EEEEEEeccCHhhH------HHHHHHhhCCCCeeEEEEecC
Q 032780 17 YVELMVPLYSHGCE------RKVKKTLTHLKGIYSVNVDYD 51 (134)
Q Consensus 17 ~v~l~V~M~C~~C~------~kIek~L~~l~GV~~v~Vd~~ 51 (134)
.+.+.+.+++++|. ..|+.+|.+++||..++|++.
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEe
Confidence 45566666666664 458888999999999888743
No 44
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=80.69 E-value=1.4 Score=29.71 Aligned_cols=36 Identities=25% Similarity=0.379 Sum_probs=27.0
Q ss_pred EEEEEEeccCHhh------HHHHHHHh-hCCCCeeEEEEecCC
Q 032780 17 YVELMVPLYSHGC------ERKVKKTL-THLKGIYSVNVDYDQ 52 (134)
Q Consensus 17 ~v~l~V~M~C~~C------~~kIek~L-~~l~GV~~v~Vd~~~ 52 (134)
.+.+.+.++.++| ...|+.+| .+++||.+++|++..
T Consensus 45 ~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~ 87 (108)
T 3lno_A 45 NAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVW 87 (108)
T ss_dssp CEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECC
T ss_pred eEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEe
Confidence 4666666777776 55788899 899999988887543
No 45
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=75.32 E-value=6.2 Score=29.11 Aligned_cols=44 Identities=18% Similarity=0.280 Sum_probs=34.6
Q ss_pred HhhHHHHHHHhhCCCCeeEEEEecCCC---------------EEEEEe---eCCHHHHHHHH
Q 032780 27 HGCERKVKKTLTHLKGIYSVNVDYDQQ---------------KVIVWG---ICNKYDVLETI 70 (134)
Q Consensus 27 ~~C~~kIek~L~~l~GV~~v~Vd~~~~---------------kVtV~~---~~~~~eI~~~I 70 (134)
.||=+-+|..+.+++||.++.+-+.++ .|.|.. .++.++|++..
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F 70 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELF 70 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHH
Confidence 467777899999999999999999876 344554 37888888855
No 46
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=74.00 E-value=10 Score=25.58 Aligned_cols=65 Identities=18% Similarity=0.272 Sum_probs=45.8
Q ss_pred eEEEEEE--eccCHhhHHHHHHHhhCCCCeeEEE-----EecCCCEE--EEEe-eCCHHHHHHHHHhCCCceEEcC
Q 032780 16 QYVELMV--PLYSHGCERKVKKTLTHLKGIYSVN-----VDYDQQKV--IVWG-ICNKYDVLETIRSKRKEARFWN 81 (134)
Q Consensus 16 ~~v~l~V--~M~C~~C~~kIek~L~~l~GV~~v~-----Vd~~~~kV--tV~~-~~~~~eI~~~I~k~G~~a~~~~ 81 (134)
.++.|.| +++-+.-. .+-+.|..++||..|+ +|..+..+ +|.| +++-++|.++|++.|-..+.++
T Consensus 5 rRlVLDVlKP~h~P~iv-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHSID 79 (96)
T 2x3d_A 5 RRLVLDVLKPIRGTSIV-DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHSID 79 (96)
T ss_dssp EEEEEEEEEESSSSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEEcccCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence 5667777 35666555 5667789999987765 44444444 4456 4899999999999998776554
No 47
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=73.76 E-value=17 Score=24.04 Aligned_cols=46 Identities=17% Similarity=0.136 Sum_probs=31.3
Q ss_pred HhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEe-eCCHHHHHHHHHh
Q 032780 27 HGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWG-ICNKYDVLETIRS 72 (134)
Q Consensus 27 ~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~-~~~~~eI~~~I~k 72 (134)
++=...|.+.|.+++|++-..++-..+++.|+- .-+..++.+.|.+
T Consensus 16 p~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~ 62 (95)
T 2jsx_A 16 SERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIES 62 (95)
T ss_dssp TTSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHH
Confidence 344678999999999996545666577888763 3455555555543
No 48
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=72.37 E-value=18 Score=23.86 Aligned_cols=54 Identities=20% Similarity=0.139 Sum_probs=40.8
Q ss_pred EEEEE-eccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEe--eCCHHHHHHHHHhCCCceEEc
Q 032780 18 VELMV-PLYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWG--ICNKYDVLETIRSKRKEARFW 80 (134)
Q Consensus 18 v~l~V-~M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~--~~~~~eI~~~I~k~G~~a~~~ 80 (134)
.++.+ ++.|+.=.-+++++|.+++. .+.+.|.. .....+|.+.+++.||+....
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~~~G~~v~~~ 83 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGHEVLEI 83 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSCCEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence 55777 59999999999999998632 23455543 345689999999999987654
No 49
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=71.88 E-value=12 Score=25.44 Aligned_cols=66 Identities=14% Similarity=0.085 Sum_probs=44.6
Q ss_pred ceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEE-----EecCCCEE--EEEe-eCCHHHHHHHHHhCCCceEEcC
Q 032780 15 AQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVN-----VDYDQQKV--IVWG-ICNKYDVLETIRSKRKEARFWN 81 (134)
Q Consensus 15 ~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~-----Vd~~~~kV--tV~~-~~~~~eI~~~I~k~G~~a~~~~ 81 (134)
..++.|.|- -+-+.-. .+-+.|..++||..|+ +|..+..+ +|.| +++-++|.++|++.|-..+.++
T Consensus 6 iRRlVLDVlKPh~P~iv-dlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIHSID 80 (100)
T 3bpd_A 6 LRRLVLDVLKPHEPKTI-VFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHSVD 80 (100)
T ss_dssp EEEEEEEEEEESCSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEEE
T ss_pred ceEEEEEecCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence 456777773 2333333 5667789999987764 44444444 4455 4999999999999998776554
No 50
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=67.74 E-value=10 Score=28.69 Aligned_cols=46 Identities=24% Similarity=0.307 Sum_probs=34.3
Q ss_pred HhhHHHHHHHhhCCCCeeEEEEecCCCE-------------------EEEEee---CCHHHHHHHHHh
Q 032780 27 HGCERKVKKTLTHLKGIYSVNVDYDQQK-------------------VIVWGI---CNKYDVLETIRS 72 (134)
Q Consensus 27 ~~C~~kIek~L~~l~GV~~v~Vd~~~~k-------------------VtV~~~---~~~~eI~~~I~k 72 (134)
.+|=+-+|..+.+++||.++.+-+.++. |.|..+ ++.++|++..=+
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~~ 117 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWE 117 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 3556666778899999999999988775 445543 678888887654
No 51
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=65.89 E-value=10 Score=28.50 Aligned_cols=44 Identities=18% Similarity=0.252 Sum_probs=33.3
Q ss_pred HhhHHHHHHHhhCCCCeeEEEEecCCCE-------------------EEEEe---eCCHHHHHHHH
Q 032780 27 HGCERKVKKTLTHLKGIYSVNVDYDQQK-------------------VIVWG---ICNKYDVLETI 70 (134)
Q Consensus 27 ~~C~~kIek~L~~l~GV~~v~Vd~~~~k-------------------VtV~~---~~~~~eI~~~I 70 (134)
.||=+-+|..+.+++||.++.+-+.++. |.|.. .++.++|++..
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f 74 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYF 74 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 4666777888999999999999888764 44553 36888888755
No 52
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=63.81 E-value=11 Score=29.68 Aligned_cols=44 Identities=23% Similarity=0.362 Sum_probs=32.9
Q ss_pred HhhHHHHHHHhhCCCCeeEEEEecCCCE-------------------EEEEee---CCHHHHHHHH
Q 032780 27 HGCERKVKKTLTHLKGIYSVNVDYDQQK-------------------VIVWGI---CNKYDVLETI 70 (134)
Q Consensus 27 ~~C~~kIek~L~~l~GV~~v~Vd~~~~k-------------------VtV~~~---~~~~eI~~~I 70 (134)
.||=+-+|..+.+++||.++.+-+.++. |.|..+ ++.++|++..
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~F 166 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVL 166 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 3556667888899999999999988764 445543 6778887755
No 53
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=61.65 E-value=13 Score=28.16 Aligned_cols=44 Identities=20% Similarity=0.266 Sum_probs=32.3
Q ss_pred HhhHHHHHHHhhCCCCeeEEEEecCCCE---------------EEEEee---CCHHHHHHHH
Q 032780 27 HGCERKVKKTLTHLKGIYSVNVDYDQQK---------------VIVWGI---CNKYDVLETI 70 (134)
Q Consensus 27 ~~C~~kIek~L~~l~GV~~v~Vd~~~~k---------------VtV~~~---~~~~eI~~~I 70 (134)
.||=+-+|..+.+++||.++.+-+.++. |.|..+ ++.++|++..
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~F 93 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFF 93 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHH
Confidence 4556667888999999999999988763 334433 6788887754
No 54
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=61.60 E-value=14 Score=28.20 Aligned_cols=46 Identities=20% Similarity=0.202 Sum_probs=33.7
Q ss_pred HhhHHHHHHHhhCCCCeeEEEEecCCCE-------------------EEEEee---CCHHHHHHHHHh
Q 032780 27 HGCERKVKKTLTHLKGIYSVNVDYDQQK-------------------VIVWGI---CNKYDVLETIRS 72 (134)
Q Consensus 27 ~~C~~kIek~L~~l~GV~~v~Vd~~~~k-------------------VtV~~~---~~~~eI~~~I~k 72 (134)
.+|=+-+|..+.+++||.++.+-+.++. |.|..+ ++.++|++..=+
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~ 116 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWE 116 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 3556666788899999999999988653 445543 688888887654
No 55
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=54.92 E-value=39 Score=22.72 Aligned_cols=67 Identities=16% Similarity=0.143 Sum_probs=44.7
Q ss_pred cceEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEE-----EecCCCEEE--EEe-eCCHHHHHHHHHhCCCceEEcC
Q 032780 14 EAQYVELMVP-LYSHGCERKVKKTLTHLKGIYSVN-----VDYDQQKVI--VWG-ICNKYDVLETIRSKRKEARFWN 81 (134)
Q Consensus 14 ~~~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~-----Vd~~~~kVt--V~~-~~~~~eI~~~I~k~G~~a~~~~ 81 (134)
...++.|.|- -+-+.-. .+-+.|..++||..++ +|..+..+. |.| +++-++|.++|++.|-..+.++
T Consensus 5 ~irRlVLDVlKPh~p~i~-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHSID 80 (97)
T 2raq_A 5 GLIRIVLDILKPHEPIIP-EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSVD 80 (97)
T ss_dssp SEEEEEEEEECCSCSCHH-HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEEE
T ss_pred CceEEEEEecCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence 3466777773 2333333 4556788888876654 455555554 445 4899999999999998876554
No 56
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=54.20 E-value=20 Score=28.98 Aligned_cols=44 Identities=18% Similarity=0.306 Sum_probs=34.4
Q ss_pred HhhHHHHHHHhhCCCCeeEEEEecCCCE-----------------EEEEe---eCCHHHHHHHH
Q 032780 27 HGCERKVKKTLTHLKGIYSVNVDYDQQK-----------------VIVWG---ICNKYDVLETI 70 (134)
Q Consensus 27 ~~C~~kIek~L~~l~GV~~v~Vd~~~~k-----------------VtV~~---~~~~~eI~~~I 70 (134)
.||=+-+|..+.+++||.++.+-++++. |.|.. .++.++|++..
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f 72 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYY 72 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 4677778889999999999999998764 45554 37888888754
No 57
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=53.82 E-value=38 Score=21.20 Aligned_cols=54 Identities=13% Similarity=0.024 Sum_probs=40.2
Q ss_pred EEEEE-eccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEe--eCCHHHHHHHHHhCCCceEEc
Q 032780 18 VELMV-PLYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWG--ICNKYDVLETIRSKRKEARFW 80 (134)
Q Consensus 18 v~l~V-~M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~--~~~~~eI~~~I~k~G~~a~~~ 80 (134)
.++.+ ++.|+.-.-+++++|..++. .+.+.|.. .....+|.+.+++.||+....
T Consensus 11 ~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~~a~~di~~~~~~~G~~~~~~ 67 (82)
T 3lvj_C 11 HTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCTFMEHELVAK 67 (82)
T ss_dssp EEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCTTHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence 56777 49999999999999998732 23444443 345678999999999987654
No 58
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=48.60 E-value=33 Score=22.56 Aligned_cols=55 Identities=9% Similarity=-0.141 Sum_probs=39.7
Q ss_pred EEEEEE-eccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEe--eCCHHHHHHHHHhCCCceEEc
Q 032780 17 YVELMV-PLYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWG--ICNKYDVLETIRSKRKEARFW 80 (134)
Q Consensus 17 ~v~l~V-~M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~--~~~~~eI~~~I~k~G~~a~~~ 80 (134)
..++.+ ++.|+.=.-+++++|.+++. .+.+.|.. .....+|.+.+++.||+....
T Consensus 27 ~~~LD~rGl~CP~PvlktkkaL~~l~~---------Ge~L~Vl~dd~~a~~dIp~~~~~~G~~v~~~ 84 (97)
T 1je3_A 27 DYRLDMVGEPCPYPAVATLEAMPQLKK---------GEILEVVSDCPQSINNIPLDARNHGYTVLDI 84 (97)
T ss_dssp EEEECSBCCSSSSSTHHHHHHTTTCCS---------SCEEEEEEBCSSSSCHHHHHHHHHTCSEEEE
T ss_pred CeEEeCCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCcchHHHHHHHHHHCCCEEEEE
Confidence 345666 49999999999999998742 23344432 355688999999999987543
No 59
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=44.45 E-value=48 Score=21.13 Aligned_cols=53 Identities=11% Similarity=0.008 Sum_probs=38.9
Q ss_pred EEE-eccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEee--CCHHHHHHHHHhCCCceEEc
Q 032780 20 LMV-PLYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGI--CNKYDVLETIRSKRKEARFW 80 (134)
Q Consensus 20 l~V-~M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~--~~~~eI~~~I~k~G~~a~~~ 80 (134)
+.. ++.|+.=.-+++++|..++. ..+.+.|..+ ....+|.+.+++.||+....
T Consensus 4 lD~rGl~CP~Pvl~~kkal~~l~~--------~G~~L~V~~dd~~a~~dI~~~~~~~G~~v~~~ 59 (87)
T 3hz7_A 4 IDALGQVCPIPVIRAKKALAELGE--------AGGVVTVLVDNDISRQNLQKMAEGMGYQSEYL 59 (87)
T ss_dssp EECTTCCTTHHHHHHHHHHHTTGG--------GCCEEEEEESSHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEcCCCCCCHHHHHHHHHHHhccC--------CCCEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence 566 59999999999999998730 1234444433 45688999999999987554
No 60
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=33.12 E-value=44 Score=24.72 Aligned_cols=60 Identities=15% Similarity=0.148 Sum_probs=41.1
Q ss_pred EEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEe--eCCHHHHHHHHHhCCCceEEcC
Q 032780 17 YVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWG--ICNKYDVLETIRSKRKEARFWN 81 (134)
Q Consensus 17 ~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~--~~~~~eI~~~I~k~G~~a~~~~ 81 (134)
..++-|. --|..|+..|-.+|.+.+||..|-+-.. ... +-...+-++.++++|.+++...
T Consensus 84 g~TlYvTlePC~~Ca~aIi~al~~~~gI~rVV~~~~-----d~~~~~p~~~~g~~~L~~aGI~V~~~~ 146 (190)
T 2nyt_A 84 NVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGR-----LFMWEEPEIQAALKKLKEAGCKLRIMK 146 (190)
T ss_pred CeEEEEEcChHHHHHHHHHHhhhhcCCccEEEEEee-----cCCcCChHHHHHHHHHHHCCCEEEEec
Confidence 5677787 6799999999999999999976543211 000 0112356788899998887643
No 61
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=32.69 E-value=26 Score=26.18 Aligned_cols=27 Identities=19% Similarity=0.325 Sum_probs=19.7
Q ss_pred HhhHHHHHHHhhCC--CCeeEEEEecCCC
Q 032780 27 HGCERKVKKTLTHL--KGIYSVNVDYDQQ 53 (134)
Q Consensus 27 ~~C~~kIek~L~~l--~GV~~v~Vd~~~~ 53 (134)
.||=+-+|..+.++ +||.++.+-+.++
T Consensus 26 gGCFWg~E~~F~~l~g~GV~~t~~GYagG 54 (187)
T 3pim_A 26 CGCFWGTEHMYRKYLNDRIVDCKVGYANG 54 (187)
T ss_dssp SSCHHHHHHHHHHHHGGGSSEEEEEEEEE
T ss_pred cCCchhhHHHHHHhcCCCeEEEEeeecCC
Confidence 34555566677777 8999998888776
No 62
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=31.76 E-value=43 Score=20.75 Aligned_cols=34 Identities=18% Similarity=0.076 Sum_probs=22.1
Q ss_pred EEEEEEeccCHhhH-----HHHHHHhhCCCCeeEEEEecC
Q 032780 17 YVELMVPLYSHGCE-----RKVKKTLTHLKGIYSVNVDYD 51 (134)
Q Consensus 17 ~v~l~V~M~C~~C~-----~kIek~L~~l~GV~~v~Vd~~ 51 (134)
.+++-..-.|+.|. .++++.|... ||.-..+|..
T Consensus 3 ~v~ly~~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di~ 41 (93)
T 1t1v_A 3 GLRVYSTSVTGSREIKSQQSEVTRILDGK-RIQYQLVDIS 41 (93)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEETT
T ss_pred CEEEEEcCCCCCchhhHHHHHHHHHHHHC-CCceEEEECC
Confidence 34444457899997 7888888764 6654445543
No 63
>3kf9_B MLCK2, myosin light chain kinase 2, skeletal/cardiac MUS; centrin, cell cycle, cell divisio mitosis, calmodulin-binding; 2.60A {Scherffelia dubia}
Probab=27.11 E-value=18 Score=17.98 Aligned_cols=7 Identities=43% Similarity=0.387 Sum_probs=5.8
Q ss_pred HHHHhhc
Q 032780 123 ALKKVFS 129 (134)
Q Consensus 123 ~~~~~~~ 129 (134)
-|||.|+
T Consensus 3 ~WkK~f~ 9 (22)
T 3kf9_B 3 RWKKNFI 9 (26)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 5999986
No 64
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=26.00 E-value=1e+02 Score=18.45 Aligned_cols=33 Identities=18% Similarity=0.121 Sum_probs=19.6
Q ss_pred ceEEEEEEeccCHhhHHHHHHHhhCCCCeeEEEEe
Q 032780 15 AQYVELMVPLYSHGCERKVKKTLTHLKGIYSVNVD 49 (134)
Q Consensus 15 ~~~v~l~V~M~C~~C~~kIek~L~~l~GV~~v~Vd 49 (134)
|..+.+-..-.|+.|. +++..|... ||.-..+|
T Consensus 5 m~~v~ly~~~~C~~C~-~~~~~L~~~-~i~~~~~d 37 (92)
T 2khp_A 5 MVDVIIYTRPGCPYCA-RAKALLARK-GAEFNEID 37 (92)
T ss_dssp CCCEEEEECTTCHHHH-HHHHHHHHT-TCCCEEEE
T ss_pred cccEEEEECCCChhHH-HHHHHHHHc-CCCcEEEE
Confidence 3444444447899998 567777664 55433333
No 65
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=25.74 E-value=1e+02 Score=20.19 Aligned_cols=35 Identities=14% Similarity=0.177 Sum_probs=24.0
Q ss_pred eEEEEEEeccCH-h-hHHHHHHHhhCCCCeeEEEEec
Q 032780 16 QYVELMVPLYSH-G-CERKVKKTLTHLKGIYSVNVDY 50 (134)
Q Consensus 16 ~~v~l~V~M~C~-~-C~~kIek~L~~l~GV~~v~Vd~ 50 (134)
+.+.+.+-+-.. + -...++..+++++||++++|-.
T Consensus 51 k~L~i~~vveD~~~~~tD~lee~i~~~e~VqSvdV~~ 87 (91)
T 2yy3_A 51 VALKFYVLGRDEEGYSFDEVAEKFEEVENVESAEVET 87 (91)
T ss_dssp EEEEEEEEECSSTTCCHHHHHHHHHHSTTEEEEEEEE
T ss_pred eeEEEEEEEECCCccccHHHHHHHhcCCCceEEEEEE
Confidence 444444434334 3 4788999999999999998753
No 66
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=25.54 E-value=2.1e+02 Score=21.45 Aligned_cols=63 Identities=10% Similarity=0.082 Sum_probs=39.1
Q ss_pred eEEEEEEe-ccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEeeCCHHHHHHHHHhCCCceEEcCC
Q 032780 16 QYVELMVP-LYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWGICNKYDVLETIRSKRKEARFWNQ 82 (134)
Q Consensus 16 ~~v~l~V~-M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~~~~~~eI~~~I~k~G~~a~~~~~ 82 (134)
-+|+.-|. --|..|+.+|-.-|...+.|. ..|- ..++--. +-.-.+=++.+.++|.+..+...
T Consensus 100 Y~vTwy~SWSPC~~CA~~v~~FL~~~~~v~-L~If--~aRLY~~-~~~~~~gLr~L~~aG~~v~iM~~ 163 (203)
T 3v4k_A 100 YRVTCFTSWSPCFSCAQEMAKFISKNKHVS-LCIK--TARIYDD-QGRCQEGLRTLAEAGAKISIMTY 163 (203)
T ss_pred EEEEEEEeCCChHHHHHHHHHHHhhCCCeE-EEEE--EEeeccc-CchHHHHHHHHHHCCCeEEecCH
Confidence 34555666 679999999999999988774 2221 1122111 22334556677778887766553
No 67
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=22.52 E-value=58 Score=19.87 Aligned_cols=51 Identities=18% Similarity=0.116 Sum_probs=37.2
Q ss_pred EEEE-eccCHhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEe--eCCHHHHHHHHHhCCCceE
Q 032780 19 ELMV-PLYSHGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWG--ICNKYDVLETIRSKRKEAR 78 (134)
Q Consensus 19 ~l~V-~M~C~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~--~~~~~eI~~~I~k~G~~a~ 78 (134)
++.+ ++.|+.=.-+++++|.+++. ++.+.|.. .....+|.+.+++.||+..
T Consensus 8 ~lD~rGl~CP~Pvl~~k~al~~l~~---------G~~L~V~~dd~~a~~di~~~~~~~G~~~~ 61 (78)
T 1pav_A 8 VIDARGSYCPGPLMELIKAYKQAKV---------GEVISVYSTDAGTKKDAPAWIQKSGQELV 61 (78)
T ss_dssp CCCBSSCSSCTTHHHHHHHHTTSCT---------TCCEECCBSSSCHHHHHHHHHHHHTEEEC
T ss_pred EEECCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEE
Confidence 3566 59999999999999998632 23344443 2456889999999999764
No 68
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=22.21 E-value=1.4e+02 Score=21.59 Aligned_cols=35 Identities=17% Similarity=0.041 Sum_probs=26.1
Q ss_pred CCeeEEEEecCCCEEEEEee-CCHHHHHHHHHhCCC
Q 032780 41 KGIYSVNVDYDQQKVIVWGI-CNKYDVLETIRSKRK 75 (134)
Q Consensus 41 ~GV~~v~Vd~~~~kVtV~~~-~~~~eI~~~I~k~G~ 75 (134)
.||....||..+++|.|+.. .......+.++.+|-
T Consensus 114 ~~v~~W~VD~~tN~VVV~a~~~~~~aa~~f~~~AG~ 149 (166)
T 3pro_C 114 DGVQSWYVDPRSNAVVVKVDDGATDAGVDFVALSGA 149 (166)
T ss_dssp TTEEEEEEEGGGTEEEEEEETTCHHHHHHHHHHHTC
T ss_pred CCCceEEEeCCCCeEEEEeCCCChHHHHHHHHHhCC
Confidence 46789999999999999865 345555666666774
No 69
>2y9j_Y Lipoprotein PRGK, protein PRGK; protein transport, type III secretion, IR1, inner membrane R C24-fold; 6.40A {Salmonella enterica subsp}
Probab=21.86 E-value=69 Score=23.11 Aligned_cols=24 Identities=21% Similarity=0.512 Sum_probs=19.0
Q ss_pred hhHHHHHHHhhCCCCeeEEEEecC
Q 032780 28 GCERKVKKTLTHLKGIYSVNVDYD 51 (134)
Q Consensus 28 ~C~~kIek~L~~l~GV~~v~Vd~~ 51 (134)
+=...+++.|+.++||.+++|.+.
T Consensus 88 ale~ELartI~~i~gV~~ArVhl~ 111 (170)
T 2y9j_Y 88 AIEQRLEQSLQTMEGVLSARVHIS 111 (170)
T ss_dssp HHHHHHHHHHTTSTTEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCeeEEEEEEE
Confidence 445678899999999999988543
No 70
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=21.77 E-value=1.7e+02 Score=19.04 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=27.4
Q ss_pred HhhHHHHHHHhhCCCCeeEEEEecCCCEEEEEe--eCCHHHHHHHHH
Q 032780 27 HGCERKVKKTLTHLKGIYSVNVDYDQQKVIVWG--ICNKYDVLETIR 71 (134)
Q Consensus 27 ~~C~~kIek~L~~l~GV~~v~Vd~~~~kVtV~~--~~~~~eI~~~I~ 71 (134)
+.+.- +-+.|-+++||.+|-+. .+=++|+- +.+=++|...|.
T Consensus 36 a~~SP-LA~~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~I~ 79 (94)
T 2k1h_A 36 EGQPE-FINRLFEIEGVKSIFYV--LDFISIDKEDNANWNELLPQIE 79 (94)
T ss_dssp TTSCH-HHHHHHTSTTEEEEEEE--TTEEEEEECTTCCHHHHHHHHH
T ss_pred ccCCH-HHHHhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHH
Confidence 34444 44455689999988766 88999983 355555554443
No 71
>1yj7_A ESCJ; mixed alpha/beta, extended linker, protein transport; 1.80A {Escherichia coli}
Probab=21.70 E-value=70 Score=23.14 Aligned_cols=22 Identities=18% Similarity=0.548 Sum_probs=19.2
Q ss_pred HHHHHHHhhCCCCeeEEEEecC
Q 032780 30 ERKVKKTLTHLKGIYSVNVDYD 51 (134)
Q Consensus 30 ~~kIek~L~~l~GV~~v~Vd~~ 51 (134)
...+++.|+.++||.+++|.+.
T Consensus 92 egELartI~~i~~V~~ARVhl~ 113 (171)
T 1yj7_A 92 EQDIERLLSKIPGVIDCSVSLN 113 (171)
T ss_dssp HHHHHHHHTTSTTEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeeEEEEEEE
Confidence 6678899999999999998765
Done!