BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032787
(133 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5N0W6|NDHN_SYNP6 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndhN
PE=3 SV=1
Length = 158
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++L +E+ A+A+Y P EGGYEGRYL RLR GY L SARGLGDP L ++ V P
Sbjct: 9 KFLRALEQEGALAVYAPLEGGYEGRYLRRLRSKGYSALTYSARGLGDPAQFLMDIHGVRP 68
>sp|Q31L05|NDHN_SYNE7 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus elongatus
(strain PCC 7942) GN=ndhN PE=3 SV=1
Length = 158
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++L +E+ A+A+Y P EGGYEGRYL RLR GY L SARGLGDP L ++ V P
Sbjct: 9 KFLRALEQEGALAVYAPLEGGYEGRYLRRLRSKGYSALTYSARGLGDPAQFLMDIHGVRP 68
>sp|B1XK97|NDHN_SYNP2 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=ndhN PE=3 SV=1
Length = 157
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ VEK A+A+Y P EGG+EGRY+ RLR GY ++L+ARGLGD LT+ + + P
Sbjct: 10 FIRTVEKSGAVAVYAPLEGGFEGRYVRRLRCSGYSVVNLTARGLGDVAAYLTQYHGIRP 68
>sp|B8HUU1|NDHN_CYAP4 NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain
PCC 7425 / ATCC 29141) GN=ndhN PE=3 SV=1
Length = 158
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
+++ D+EK A+ IY P EGG+EGRY RLR GY L +SA GLGD + LT+V+ V P
Sbjct: 9 QFIQDLEKSGALGIYVPSEGGFEGRYQRRLRAAGYSTLHISAPGLGDLPSYLTQVHGVRP 68
>sp|P74069|NDHN_SYNY3 NAD(P)H-quinone oxidoreductase subunit N OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ndhN PE=1 SV=1
Length = 161
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +E A+A+Y P EGGYEGRY RLR GY + LSARGLGD E L +V+ V P
Sbjct: 13 FIRALENDGALAVYAPLEGGYEGRYQRRLRANGYASISLSARGLGDVEAYLMQVHGVRP 71
>sp|B2ITQ6|NDHN_NOSP7 NAD(P)H-quinone oxidoreductase subunit N OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=ndhN PE=3 SV=1
Length = 158
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 74 LSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
+ D+EK A+ +Y P EGGYEGRY RLR GY L ++A+GLGD LT+++ V P
Sbjct: 11 IRDLEKFGALGVYVPLEGGYEGRYQRRLRAAGYTTLHITAKGLGDVAAYLTRIHGVRP 68
>sp|B0JY52|NDHN_MICAN NAD(P)H-quinone oxidoreductase subunit N OS=Microcystis aeruginosa
(strain NIES-843) GN=ndhN PE=3 SV=1
Length = 158
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ D+E++ A+ +Y P EGGYEGRY RLR GY L ++ARGLGD LT ++ V P
Sbjct: 10 FIRDLEQYGALGVYAPLEGGYEGRYQRRLRATGYNVLHITARGLGDLSAYLTGIHGVRP 68
>sp|Q8YPH8|NDHN_NOSS1 NAD(P)H-quinone oxidoreductase subunit N OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=ndhN PE=3 SV=1
Length = 162
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%)
Query: 74 LSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
+ D+EK ++ +Y P EGG+EGRY RLR GY L +ARGLGD LT V+ V P
Sbjct: 11 IRDLEKFGSVGVYVPLEGGFEGRYRRRLRAAGYTTLQFTARGLGDVAAYLTGVHGVRP 68
>sp|Q3MFC2|NDHN_ANAVT NAD(P)H-quinone oxidoreductase subunit N OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=ndhN PE=3 SV=1
Length = 162
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%)
Query: 74 LSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
+ D+EK ++ +Y P EGG+EGRY RLR GY L +ARGLGD LT V+ V P
Sbjct: 11 IRDLEKFGSVGVYVPLEGGFEGRYRRRLRAAGYTTLQFTARGLGDVAAYLTGVHGVRP 68
>sp|A3PF48|NDHN_PROM0 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9301) GN=ndhN PE=3 SV=1
Length = 158
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D++ +K +AI+ P EGGYE R L R+R G+ SARGLGDPE L K++ V P
Sbjct: 9 KFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRP 68
>sp|A2BTD8|NDHN_PROMS NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain AS9601) GN=ndhN PE=3 SV=1
Length = 158
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D++ +K +AI+ P EGGYE R L R+R G+ SARGLGDPE L K++ V P
Sbjct: 9 KFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRP 68
>sp|A8G763|NDHN_PROM2 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9215) GN=ndhN PE=3 SV=1
Length = 158
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D++ +K +AI+ P EGGYE R L R+R G+ SARGLGDPE L K++ V P
Sbjct: 9 KFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRP 68
>sp|Q318I3|NDHN_PROM9 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9312) GN=ndhN PE=3 SV=1
Length = 158
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 75 SDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
+D++ +K +AI+ P EGGYE R L R+R G+ SARGLGDPE L K++ V P
Sbjct: 12 NDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRP 68
>sp|Q7UZU6|NDHN_PROMP NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
subsp. pastoris (strain CCMP1986 / MED4) GN=ndhN PE=3
SV=1
Length = 156
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D+ K+K +A++ P EGGYE R L R+R G+ SARGLGDPE L K++ + P
Sbjct: 9 KFHNDLNKNKCLAMFAPLEGGYETRLLRRMRAKGFKTYITSARGLGDPEVFLLKLHGIRP 68
>sp|A5GVV9|NDHN_SYNR3 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain RCC307) GN=ndhN PE=3 SV=1
Length = 153
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
D+E+ +A+A+Y P EGG E R L RLR GY SARGLGDPE L ++ V P
Sbjct: 13 DLERERALAVYAPLEGGAETRLLRRLRAAGYRTELTSARGLGDPEAFLLGLHGVRP 68
>sp|Q7NEV8|NDHN_GLOVI NAD(P)H-quinone oxidoreductase subunit N OS=Gloeobacter violaceus
(strain PCC 7421) GN=ndhN PE=3 SV=1
Length = 159
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
R+++DVEKH +IA++ P EGG EG Y RLR +GY ++A+GLGD L + + V P
Sbjct: 13 RFVADVEKHSSIALWAPPEGGIEGNYQRRLRGIGYRTQIITAKGLGDISRFLLESHGVRP 72
>sp|A2BYT7|NDHN_PROM5 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9515) GN=ndhN PE=3 SV=1
Length = 156
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D++K+K +A++ P EGGYE R L R+R G+ SARGLGDPE L ++ + P
Sbjct: 9 KFHNDLKKNKCLAMFAPLEGGYETRLLRRMRAKGFKTYITSARGLGDPEVFLLNLHGIRP 68
>sp|Q110A6|NDHN_TRIEI NAD(P)H-quinone oxidoreductase subunit N OS=Trichodesmium
erythraeum (strain IMS101) GN=ndhN PE=3 SV=1
Length = 158
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 74 LSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
+ D+EK ++A+Y P EGG+EGRY RLR GY ++ARGLGD LT V+ V P
Sbjct: 11 IRDLEKSGSLAVYPPLEGGFEGRYQRRLRASGYVSESITARGLGDLAMYLTGVHGVRP 68
>sp|B7JYJ3|NDHN_CYAP8 NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain
PCC 8801) GN=ndhN PE=3 SV=1
Length = 158
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +EK ++A+Y P EGG+EGRY RLR GY+ L+ARGLGD L V+ V P
Sbjct: 10 FIRALEKSGSLAVYAPLEGGFEGRYQRRLRTNGYHTFSLTARGLGDVSAYLMGVHGVRP 68
>sp|Q7U4K1|NDHN_SYNPX NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain WH8102) GN=ndhN PE=3 SV=1
Length = 153
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 35/56 (62%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
D+E H +A++ P EGG E R L RLR GY SARGLGDPE LT+ + + P
Sbjct: 13 DLEAHGCLAVHAPLEGGAETRLLRRLRGAGYRTRLWSARGLGDPEVFLTQKHGIRP 68
>sp|B0CA85|NDHN_ACAM1 NAD(P)H-quinone oxidoreductase subunit N OS=Acaryochloris marina
(strain MBIC 11017) GN=ndhN PE=3 SV=1
Length = 151
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
+++ +E+ A+ IY P EGG+EGRY RLR GY L +SA G+GD + T V+ V P
Sbjct: 9 KFIRTIEQSGAVGIYVPSEGGFEGRYKRRLRATGYLTLFVSAPGMGDLASYFTDVHGVRP 68
>sp|B7KEE5|NDHN_CYAP7 NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain
PCC 7424) GN=ndhN PE=3 SV=1
Length = 158
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +EK A+ +Y P EGG+EGRY RLR GY +L+ARGLGD + LT ++ V P
Sbjct: 10 FIRALEKSGALGVYVPLEGGFEGRYQRRLRANGYTPYNLTARGLGDLSSYLTGIHGVRP 68
>sp|B1WYX9|NDHN_CYAA5 NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain
ATCC 51142) GN=ndhN PE=3 SV=1
Length = 158
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 37/59 (62%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +EK A+ +Y P EGG+EGRY RLR GY L L+ARGLGD L V+ V P
Sbjct: 10 FVRALEKSGALGVYAPLEGGFEGRYQRRLRTNGYDSLSLTARGLGDVSAYLMGVHGVRP 68
>sp|Q2JIJ7|NDHN_SYNJB NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ndhN PE=3 SV=1
Length = 147
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 71 GRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVC 130
+++ +E+ A+AIY EGG EG YL RLR GY + LS++G+GD + LT+++ V
Sbjct: 8 AKFVQQLEQAGALAIYVTPEGGSEGHYLRRLRGAGYEVVTLSSKGIGDLASYLTRIHGVR 67
Query: 131 PVS 133
P +
Sbjct: 68 PAT 70
>sp|Q8DJU2|NDHN_THEEB NAD(P)H-quinone oxidoreductase subunit N OS=Thermosynechococcus
elongatus (strain BP-1) GN=ndhN PE=1 SV=1
Length = 150
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
+++ D+E A+A++ P EGG+EGRY RLR GY L +SA GLGD LT+ + + P
Sbjct: 8 QFVKDLESAGALALFVPPEGGFEGRYQRRLRSKGYTTLPMSAPGLGDLAAYLTQEHGIRP 67
>sp|B1X509|NDHN_PAUCH NAD(P)H-quinone oxidoreductase subunit N, organellar chromatophore
OS=Paulinella chromatophora GN=ndhN PE=3 SV=1
Length = 158
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVY 127
D+E+ A+A++ P EGG E R + RLR +GY SA+GLGDPE L K++
Sbjct: 13 DLERDGALALFVPLEGGAETRLMRRLRAVGYKAYLTSAKGLGDPEAYLLKLH 64
>sp|Q3AUW5|NDHN_SYNS9 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain CC9902) GN=ndhN PE=3 SV=1
Length = 157
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
D+E + +A++ P EGG E R L RLR GY SARGLGDPE LT+ + + P
Sbjct: 17 DLEANGCLAVHAPLEGGAETRLLRRLRGAGYRTRMTSARGLGDPEVFLTQKHGIRP 72
>sp|Q46IQ8|NDHN_PROMT NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain NATL2A) GN=ndhN PE=3 SV=1
Length = 154
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D+E +AI +P EGG E R L RLR GY SARGLGDP LT+++ + P
Sbjct: 9 KFRTDLESFGCLAILSPLEGGAETRLLRRLRASGYQTQVTSARGLGDPVVFLTQLHGIRP 68
>sp|A2C500|NDHN_PROM1 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain NATL1A) GN=ndhN PE=3 SV=1
Length = 154
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D+E +AI +P EGG E R L RLR GY SARGLGDP LT+++ + P
Sbjct: 9 KFRTDLESFGCLAILSPLEGGAETRLLRRLRASGYQTQITSARGLGDPVVFLTQLHGIRP 68
>sp|Q3AMM9|NDHN_SYNSC NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain CC9605) GN=ndhN PE=3 SV=1
Length = 153
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
D+E + +A+ P EGG E R L RLR GY SARGLGDPE LT+ + + P
Sbjct: 13 DLEANGCLAVQAPLEGGAETRLLRRLRGAGYSTRMTSARGLGDPEVFLTQKHGIRP 68
>sp|Q7V9W1|NDHN_PROMA NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain SARG / CCMP1375 / SS120) GN=ndhN PE=3 SV=1
Length = 152
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
D+E +AI P EGG E R L RL+ GY S RGLGDPE L K++ + P
Sbjct: 13 DLEASGCLAINVPLEGGAETRLLRRLKAAGYKTQITSVRGLGDPEAFLLKLHGIRP 68
>sp|A9BCP8|NDHN_PROM4 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9211) GN=ndhN PE=3 SV=1
Length = 153
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%)
Query: 75 SDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
D+E +AI TP EGG E R L RL+ GY S RG GDPE L K++ + P
Sbjct: 12 DDLESACCLAIQTPLEGGAETRLLRRLKAAGYRTQITSVRGFGDPEVFLLKLHGIRP 68
>sp|Q2JVL1|NDHN_SYNJA NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain JA-3-3Ab) GN=ndhN PE=3 SV=1
Length = 147
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 71 GRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVC 130
+++ +E+ A+AI+ EGG EG YL RLR GY + LS++G+GD + LT + V
Sbjct: 8 AKFVQQLEQCGALAIFVTPEGGSEGHYLRRLRGAGYEVVTLSSKGIGDLASYLTSSHGVR 67
Query: 131 PVS 133
P +
Sbjct: 68 PAT 70
>sp|A2CC26|NDHN_PROM3 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9303) GN=ndhN PE=3 SV=1
Length = 153
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
D++ +A++ P EGG E R L RLR GY SARGLGDPE L +++ + P
Sbjct: 13 DLDACGCLAMHVPLEGGSETRLLRRLRAAGYRTQLSSARGLGDPEVFLFQLHGIRP 68
>sp|Q7V543|NDHN_PROMM NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9313) GN=ndhN PE=3 SV=1
Length = 153
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
D++ +A++ P EGG E R L RLR GY SARGLGDPE L +++ + P
Sbjct: 13 DLDACGCLAMHVPLEGGSETRLLRRLRAAGYRTQLSSARGLGDPEVFLFELHGIRP 68
>sp|A5GIU6|NDHN_SYNPW NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain WH7803) GN=ndhN PE=3 SV=1
Length = 153
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++E +A++ P EGG E R L RLR GY SARGLGDPE L + + V P
Sbjct: 13 ELESAGCMAVHAPLEGGAETRLLRRLRAAGYRTHLTSARGLGDPEVFLFQKHGVRP 68
>sp|Q0ID04|NDHN_SYNS3 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain CC9311) GN=ndhN PE=3 SV=1
Length = 153
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++E +A++ P EGG E R L RLR GY SARGLGDPE L + + + P
Sbjct: 13 ELESAGCMAVFAPLEGGAETRLLRRLRGAGYRTQLSSARGLGDPEVFLFQKHGIRP 68
>sp|Q8SS49|RL22_ENCCU 60S ribosomal protein L22 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL22 PE=1 SV=1
Length = 112
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 28 MMMQGLRRRNGKASKRVGVTNCSGNSGIEI---GDFIGGDLLKPDLGRWLSDVEKHKAIA 84
+ Q ++ GK K + + N +GN +E+ G FIG LK +GR+L + I
Sbjct: 33 FLQQKIKCYTGKKEKLLHI-NANGNI-VEVDVTGGFIGKQGLKWQIGRFLHMKKLRAFIK 90
Query: 85 IYTPHEGGYEGRYLN 99
I+ G+E RY+N
Sbjct: 91 IFAQGLDGFELRYIN 105
>sp|Q929A9|ADDA_LISIN ATP-dependent helicase/nuclease subunit A OS=Listeria innocua serovar
6a (strain CLIP 11262) GN=addA PE=3 SV=1
Length = 1235
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 60 FIGGDLLKPDLGRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGL 116
F+ DL K W+ +V+ HK + + +P++ E R++ Y + D A G+
Sbjct: 960 FLTDDLEKEKSDNWMENVKAHKQVPVKSPYKDEIE-------RFMHYQYKDEEATGI 1009
>sp|P27909|POLG_DEN1B Genome polyprotein OS=Dengue virus type 1 (strain Brazil/97-11/1997)
PE=1 SV=2
Length = 3392
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 16 KIQQKQQPTRNWMMMQGLRRRNGKASKRVGVTNCSGNSGIEI---------GDFIGGDLL 66
K+ + Q+P +N +M + RR+ + S +VG + + +E+ G F +L
Sbjct: 3068 KVVRVQRPAKNGTVMDVISRRDQRGSGQVGTYGLNTFTNMEVQLIRQMESEGIFFPSELE 3127
Query: 67 KPDLG-RWLSDVEKHKA 82
P+L R L +EKH A
Sbjct: 3128 SPNLAERVLDWLEKHGA 3144
>sp|Q6C414|SEC31_YARLI Protein transport protein SEC31 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=SEC31 PE=3 SV=1
Length = 1184
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 10 GTPASIKIQQKQQPTRNWMMMQGLRRRNGKASKRVGVTNCSGNSGIEIGDFIG 62
GT + KI KQ P+ W+ + + G K V VT G S +++G F+G
Sbjct: 343 GTQSQAKISLKQAPS--WLQ-RPVSNSFGFGGKIVTVTTTDGKSTVQVGKFVG 392
>sp|Q2UQJ5|DML1_ASPOR Protein dml1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=dml1 PE=3 SV=1
Length = 493
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 64 DLLKPDLGRWLSDVEKHKAIAIYTPHE---GGYEGRYLNRLR 102
DLL D+ + + ++ +AI ++T + GG+ RY++RLR
Sbjct: 176 DLLDRDVRPFAEECDQLRAIQLFTSSDDAWGGFSARYVDRLR 217
>sp|P27095|ACSA_METSO Acetyl-coenzyme A synthetase OS=Methanothrix soehngenii GN=acsA
PE=1 SV=1
Length = 672
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 68 PDLGRWLSDVEKHKAIAIYT 87
PD GRW +++ HK +YT
Sbjct: 361 PDFGRWWKNIQDHKVTVLYT 380
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,620,776
Number of Sequences: 539616
Number of extensions: 2305605
Number of successful extensions: 3950
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3910
Number of HSP's gapped (non-prelim): 45
length of query: 133
length of database: 191,569,459
effective HSP length: 99
effective length of query: 34
effective length of database: 138,147,475
effective search space: 4697014150
effective search space used: 4697014150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)