Query 032787
Match_columns 133
No_of_seqs 53 out of 55
Neff 2.1
Searched_HMMs 13730
Date Mon Mar 25 09:19:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032787.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032787hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2d13a1 c.26.2.1 (A:2-227) Hyp 67.4 4.8 0.00035 29.3 5.4 64 60-123 93-156 (226)
2 d2obba1 c.108.1.25 (A:1-122) H 61.5 2.1 0.00015 28.4 2.2 29 88-118 22-50 (122)
3 d1vhka2 c.116.1.5 (A:74-253) H 61.1 3.3 0.00024 28.5 3.2 44 71-114 114-157 (180)
4 d1xpja_ c.108.1.18 (A:) Hypoth 51.5 4.7 0.00034 27.0 2.7 23 96-118 31-53 (124)
5 d2fuka1 c.69.1.36 (A:3-220) XC 50.1 7 0.00051 27.2 3.5 26 96-121 58-83 (218)
6 d1dlca1 b.18.1.3 (A:500-644) d 47.7 0.74 5.4E-05 31.8 -2.1 37 59-104 32-69 (145)
7 d1ltqa1 c.108.1.9 (A:153-301) 47.0 5.7 0.00042 24.2 2.4 26 88-115 37-62 (149)
8 d1ciya1 b.18.1.3 (A:462-609) d 46.2 1.2 8.7E-05 30.7 -1.2 37 60-105 32-69 (148)
9 d1tqha_ c.69.1.29 (A:) Carboxy 45.6 7.6 0.00055 22.8 2.7 24 97-120 30-53 (242)
10 d1v6za2 c.116.1.5 (A:67-228) H 45.1 8.6 0.00063 25.9 3.3 42 73-114 100-141 (162)
11 d1xkla_ c.69.1.20 (A:) Salicyl 44.8 7.2 0.00053 23.1 2.5 24 96-119 20-43 (258)
12 d2i3da1 c.69.1.36 (A:2-219) Hy 44.1 13 0.00092 24.6 3.9 40 81-120 24-71 (218)
13 d1qtwa_ c.1.15.1 (A:) Endonucl 38.7 12 0.00089 25.0 3.2 31 82-113 3-33 (285)
14 d3c70a1 c.69.1.20 (A:2-257) Hy 34.4 14 0.001 22.0 2.6 24 96-119 20-43 (256)
15 d1nxza2 c.116.1.5 (A:74-247) H 34.3 17 0.0013 24.4 3.4 36 79-114 113-148 (174)
16 d2p10a1 c.1.12.9 (A:8-204) Unc 33.2 22 0.0016 25.1 4.0 39 67-105 99-138 (197)
17 d1usga_ c.93.1.1 (A:) Leucine- 33.2 15 0.0011 24.5 2.9 56 67-122 179-234 (346)
18 d1qgoa_ c.92.1.2 (A:) Cobalt c 31.5 21 0.0015 24.5 3.6 54 67-121 176-242 (257)
19 d1xvia_ c.108.1.10 (A:) Putati 30.0 8.2 0.00059 24.1 1.0 31 96-126 28-58 (232)
20 d1wzca1 c.108.1.10 (A:1-243) P 29.3 8.1 0.00059 24.5 0.9 31 96-126 24-54 (243)
21 d1brta_ c.69.1.12 (A:) Bromope 28.0 22 0.0016 21.8 2.8 24 96-119 41-64 (277)
22 d1nrwa_ c.108.1.10 (A:) Hypoth 27.0 12 0.00086 24.6 1.4 31 96-126 25-55 (285)
23 d1vkza3 d.142.1.2 (A:94-313) G 27.0 9.1 0.00066 25.2 0.8 22 100-122 170-191 (220)
24 d1mgpa_ c.119.1.1 (A:) Hypothe 26.0 18 0.0013 25.8 2.5 45 64-108 42-86 (285)
25 d1j5ya2 d.94.2.1 (A:68-174) Pu 25.9 13 0.00097 24.9 1.6 34 67-114 53-86 (107)
26 d1r3da_ c.69.1.35 (A:) Hypothe 25.9 26 0.0019 20.6 2.8 23 97-119 35-57 (264)
27 d2cc0a1 c.6.2.3 (A:1-192) Acet 25.0 30 0.0022 23.1 3.3 54 57-112 123-183 (192)
28 d1a8sa_ c.69.1.12 (A:) Chlorop 23.7 29 0.0021 21.1 2.8 23 97-119 38-60 (273)
29 d1uxoa_ c.69.1.31 (A:) Hypothe 23.1 29 0.0021 21.0 2.7 23 96-118 21-43 (186)
30 d2iw1a1 c.87.1.8 (A:2-371) Lip 22.0 22 0.0016 22.9 2.0 33 86-119 9-44 (370)
31 d2j13a1 c.6.2.3 (A:1-235) Puta 21.0 37 0.0027 23.3 3.2 50 64-113 109-168 (235)
32 d1rlma_ c.108.1.10 (A:) Sugar 20.8 17 0.0012 23.7 1.2 29 97-125 28-56 (269)
33 d1a88a_ c.69.1.12 (A:) Chlorop 20.7 34 0.0025 20.8 2.6 23 97-119 40-62 (275)
34 d1ji6a1 b.18.1.3 (A:503-652) d 20.7 10 0.00074 25.8 0.1 38 60-104 33-71 (150)
No 1
>d2d13a1 c.26.2.1 (A:2-227) Hypothetical protein PH1257 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=67.36 E-value=4.8 Score=29.26 Aligned_cols=64 Identities=19% Similarity=0.287 Sum_probs=49.5
Q ss_pred cccCcccccChhhHHHHHHhcceeEEecCCCCCchhhhHhHhhhcCceEEEeccCCCCChhhhh
Q 032787 60 FIGGDLLKPDLGRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTL 123 (133)
Q Consensus 60 ~iggdl~~~d~~~f~rDlEk~gaLaiy~PlEGG~EGRy~RRLRa~GY~~~~~SARGLGDpeayL 123 (133)
.+-||+.--+...|++++-+.=-|-.+.||.+=-.--+++.|-++|+.++.++..-.|=++.||
T Consensus 93 vv~Gdi~~~~~r~r~e~~c~~~gl~~~~PLW~~d~~~ll~e~i~~G~~aii~~v~~~gL~~~~l 156 (226)
T d2d13a1 93 IVAGALASRYQKERIENVARELGLKVYTPAWEKDPYQYMLEIIKLGFKVVFVAVSAYGLNESWL 156 (226)
T ss_dssp EECCCSSCHHHHHHHHHHHHHHTCEEECTTTTCCHHHHHHHHHHTTCEEEEEEECSTTCCGGGT
T ss_pred eEecceecHHHHHHHHhhHHhcCcEEEecccCCCHHHHHHHHHHCCCcEEEEEEccCCCCHHHc
Confidence 4558888888888999886666688889999988888999999999999886554433333443
No 2
>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=61.54 E-value=2.1 Score=28.40 Aligned_cols=29 Identities=14% Similarity=-0.193 Sum_probs=23.3
Q ss_pred CCCCCchhhhHhHhhhcCceEEEeccCCCCC
Q 032787 88 PHEGGYEGRYLNRLRYLGYYFLDLSARGLGD 118 (133)
Q Consensus 88 PlEGG~EGRy~RRLRa~GY~~~~~SARGLGD 118 (133)
|.++= -..++.|+.+||+...+|||+..-
T Consensus 22 Pi~~~--Ie~l~~L~~~G~~IIi~TaR~~~~ 50 (122)
T d2obba1 22 EIPFA--VETLKLLQQEKHRLILWSVREGEL 50 (122)
T ss_dssp BCTTH--HHHHHHHHHTTCEEEECCSCCHHH
T ss_pred ccHHH--HHHHHHHHHCCCeEEEEecCCCcc
Confidence 66653 457899999999999999998543
No 3
>d1vhka2 c.116.1.5 (A:74-253) Hypothetical protein YqeU {Bacillus subtilis [TaxId: 1423]}
Probab=61.10 E-value=3.3 Score=28.48 Aligned_cols=44 Identities=23% Similarity=0.204 Sum_probs=37.2
Q ss_pred hhHHHHHHhcceeEEecCCCCCchhhhHhHhhhcCceEEEeccC
Q 032787 71 GRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSAR 114 (133)
Q Consensus 71 ~~f~rDlEk~gaLaiy~PlEGG~EGRy~RRLRa~GY~~~~~SAR 114 (133)
....+++.+...+.|.+=+||||.-.=..-|+.+|+.++.+.-|
T Consensus 114 ~~~~~~~~~~~~i~i~IGPEGGfs~~E~~~l~~~g~~~v~LG~~ 157 (180)
T d1vhka2 114 SAIVSSLPKGSSLLIVFGPEGGLTEAEVERLTEQDGVTCGLGPR 157 (180)
T ss_dssp HHHHHTCCTTCEEEEEECCTTCCCHHHHHHHHHTTCEEECCCSS
T ss_pred HHHHhccCCCCeEEEEecCCCCCCHHHHHHHHHCCCEEEECCCC
Confidence 44566777889999999999999999888999999998887654
No 4
>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}
Probab=51.48 E-value=4.7 Score=26.99 Aligned_cols=23 Identities=22% Similarity=0.335 Sum_probs=20.6
Q ss_pred hhHhHhhhcCceEEEeccCCCCC
Q 032787 96 RYLNRLRYLGYYFLDLSARGLGD 118 (133)
Q Consensus 96 Ry~RRLRa~GY~~~~~SARGLGD 118 (133)
-.++.|+.+||+....||||...
T Consensus 31 e~l~~l~~~G~~Iii~TaR~~~~ 53 (124)
T d1xpja_ 31 EQLREYHQLGFEIVISTARNMRT 53 (124)
T ss_dssp HHHHHHHHTTCEEEEEECTTTTT
T ss_pred HHHHHHHHCCCEEEEEecCCccc
Confidence 46899999999999999999865
No 5
>d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]}
Probab=50.13 E-value=7 Score=27.15 Aligned_cols=26 Identities=23% Similarity=0.304 Sum_probs=22.0
Q ss_pred hhHhHhhhcCceEEEeccCCCCChhh
Q 032787 96 RYLNRLRYLGYYFLDLSARGLGDPET 121 (133)
Q Consensus 96 Ry~RRLRa~GY~~~~~SARGLGDpea 121 (133)
++.++|.++||.++..--||.|+-+-
T Consensus 58 ~la~~l~~~G~~vlrfd~RG~G~S~g 83 (218)
T d2fuka1 58 MAARALRELGITVVRFNFRSVGTSAG 83 (218)
T ss_dssp HHHHHHHTTTCEEEEECCTTSTTCCS
T ss_pred HHHHHHHHcCCeEEEeecCCCccCCC
Confidence 45678999999999999999988653
No 6
>d1dlca1 b.18.1.3 (A:500-644) delta-Endotoxin, C-terminal domain {Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]}
Probab=47.75 E-value=0.74 Score=31.81 Aligned_cols=37 Identities=30% Similarity=0.616 Sum_probs=24.6
Q ss_pred ccccCcccccChhhHHHHHHhcceeE-EecCCCCCchhhhHhHhhhc
Q 032787 59 DFIGGDLLKPDLGRWLSDVEKHKAIA-IYTPHEGGYEGRYLNRLRYL 104 (133)
Q Consensus 59 d~iggdl~~~d~~~f~rDlEk~gaLa-iy~PlEGG~EGRy~RRLRa~ 104 (133)
-|.|||||++.- .|.+. ++....--.-.||+=|+|.|
T Consensus 32 G~TGGdlv~l~~---------~~~~~~~~~~~~~~~~q~YrvRIRYA 69 (145)
T d1dlca1 32 RFTGGDIIQCTE---------NGSAATIYVTPDVSYSQKYRARIHYA 69 (145)
T ss_dssp SSSSSCEEEECS---------SEEEEEEECEESCSSCCEEEEEEEEE
T ss_pred CCCCccEEEecC---------CCceeEEEEEeCCCCceEEEEEEEEe
Confidence 388999998642 23322 44444455677899999977
No 7
>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=47.03 E-value=5.7 Score=24.19 Aligned_cols=26 Identities=19% Similarity=0.181 Sum_probs=21.5
Q ss_pred CCCCCchhhhHhHhhhcCceEEEeccCC
Q 032787 88 PHEGGYEGRYLNRLRYLGYYFLDLSARG 115 (133)
Q Consensus 88 PlEGG~EGRy~RRLRa~GY~~~~~SARG 115 (133)
|..|-.| .++.|+++||....+|+|.
T Consensus 37 ~~p~v~~--~l~~l~~~G~~Iii~T~R~ 62 (149)
T d1ltqa1 37 INPMVVE--LSKMYALMGYQIVVVSGRE 62 (149)
T ss_dssp BCHHHHH--HHHHHHHTTCEEEEEECSC
T ss_pred cCHHHHH--HHHHHHhccCeEEEEecCc
Confidence 4555444 7899999999999999997
No 8
>d1ciya1 b.18.1.3 (A:462-609) delta-Endotoxin, C-terminal domain {Bacillus thuringiensis, CRYIA (A) [TaxId: 1428]}
Probab=46.20 E-value=1.2 Score=30.73 Aligned_cols=37 Identities=30% Similarity=0.579 Sum_probs=21.9
Q ss_pred cccCcccccC-hhhHHHHHHhcceeEEecCCCCCchhhhHhHhhhcC
Q 032787 60 FIGGDLLKPD-LGRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLG 105 (133)
Q Consensus 60 ~iggdl~~~d-~~~f~rDlEk~gaLaiy~PlEGG~EGRy~RRLRa~G 105 (133)
|.|||||++. .+. -+.|-+- ...---.||+=|+|.|=
T Consensus 32 ~TGGdlv~l~~~g~-------~~~~~~~--~~~~~~q~YrVRIRYAS 69 (148)
T d1ciya1 32 FTGGDILRRTSPGQ-------ISTLRVN--ITAPLSQRYRVRIRYAS 69 (148)
T ss_dssp SSSSCEEEESSSEE-------EEEEEEE--ECSCTTCCEEEEEEEEE
T ss_pred CCCccEEEecCCCc-------eEEEEEE--EcCCCCcEEEEEEEEEe
Confidence 8999999873 221 1223232 22222468999999763
No 9
>d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]}
Probab=45.59 E-value=7.6 Score=22.75 Aligned_cols=24 Identities=25% Similarity=0.203 Sum_probs=19.8
Q ss_pred hHhHhhhcCceEEEeccCCCCChh
Q 032787 97 YLNRLRYLGYYFLDLSARGLGDPE 120 (133)
Q Consensus 97 y~RRLRa~GY~~~~~SARGLGDpe 120 (133)
..+.|..+||.++.+.-||-|+..
T Consensus 30 l~~~L~~~G~~v~~~D~~G~G~s~ 53 (242)
T d1tqha_ 30 LGRFLESKGYTCHAPIYKGHGVPP 53 (242)
T ss_dssp HHHHHHHTTCEEEECCCTTSSSCH
T ss_pred HHHHHHHCCCEEEEEeCCCCcccc
Confidence 456778889999999999999643
No 10
>d1v6za2 c.116.1.5 (A:67-228) Hypothetical protein TTHA0657 (TT1575) {Thermus thermophilus [TaxId: 274]}
Probab=45.08 E-value=8.6 Score=25.93 Aligned_cols=42 Identities=21% Similarity=0.305 Sum_probs=34.7
Q ss_pred HHHHHHhcceeEEecCCCCCchhhhHhHhhhcCceEEEeccC
Q 032787 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSAR 114 (133)
Q Consensus 73 f~rDlEk~gaLaiy~PlEGG~EGRy~RRLRa~GY~~~~~SAR 114 (133)
+...+.+.+.+.|.+=+||||.-.=..-|+.+|+..+.+.-|
T Consensus 100 ~~~~~~~~~~i~i~IGPEGGfs~~Ei~~l~~~g~~~v~LG~~ 141 (162)
T d1v6za2 100 VREVLDPEKPLALAVGPEGGFAEEEVALLEARGFTPVSLGRR 141 (162)
T ss_dssp HHHHCCTTSCEEEEECCTTCCCHHHHHHHHHHTEEEECCCSS
T ss_pred chhhhcccCcceEEEeccCCCCHHHHHHHHHCCCEEEECCCC
Confidence 445566788899999999999998889999999988876543
No 11
>d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=44.78 E-value=7.2 Score=23.10 Aligned_cols=24 Identities=17% Similarity=0.090 Sum_probs=20.4
Q ss_pred hhHhHhhhcCceEEEeccCCCCCh
Q 032787 96 RYLNRLRYLGYYFLDLSARGLGDP 119 (133)
Q Consensus 96 Ry~RRLRa~GY~~~~~SARGLGDp 119 (133)
+....|.+.||+.+.+.-||-|+-
T Consensus 20 ~~~~~L~~~g~~vi~~Dl~G~G~S 43 (258)
T d1xkla_ 20 KLKPLLEAAGHKVTALDLAASGTD 43 (258)
T ss_dssp THHHHHHHTTCEEEECCCTTSTTC
T ss_pred HHHHHHHhCCCEEEEecCCCCCCC
Confidence 566788889999999999999864
No 12
>d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=44.06 E-value=13 Score=24.63 Aligned_cols=40 Identities=23% Similarity=0.328 Sum_probs=29.9
Q ss_pred ceeEEecCC---CCCchh-----hhHhHhhhcCceEEEeccCCCCChh
Q 032787 81 KAIAIYTPH---EGGYEG-----RYLNRLRYLGYYFLDLSARGLGDPE 120 (133)
Q Consensus 81 gaLaiy~Pl---EGG~EG-----Ry~RRLRa~GY~~~~~SARGLGDpe 120 (133)
..++|+... -||.-. ...|.|..+||.|+...-||.|.-+
T Consensus 24 ~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~ 71 (218)
T d2i3da1 24 APIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQ 71 (218)
T ss_dssp CCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCC
T ss_pred CCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCc
Confidence 346777754 466532 3678899999999999999999653
No 13
>d1qtwa_ c.1.15.1 (A:) Endonuclease IV {Escherichia coli [TaxId: 562]}
Probab=38.69 E-value=12 Score=24.95 Aligned_cols=31 Identities=16% Similarity=0.089 Sum_probs=25.7
Q ss_pred eeEEecCCCCCchhhhHhHhhhcCceEEEecc
Q 032787 82 AIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSA 113 (133)
Q Consensus 82 aLaiy~PlEGG~EGRy~RRLRa~GY~~~~~SA 113 (133)
=|+++++++||.|-. .++.++.||.++.+-+
T Consensus 3 ~~~~h~s~~~~l~~a-~~~a~e~G~~~ieif~ 33 (285)
T d1qtwa_ 3 YIGAHVSAAGGLANA-AIRAAEIDATAFALFT 33 (285)
T ss_dssp EEEEECCCTTCHHHH-HHHHHHTTCSEEECCS
T ss_pred cEEEEeccccCHHHH-HHHHHHcCCCEEEEEC
Confidence 378999999999875 4568999999988843
No 14
>d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]}
Probab=34.37 E-value=14 Score=22.03 Aligned_cols=24 Identities=21% Similarity=0.122 Sum_probs=20.4
Q ss_pred hhHhHhhhcCceEEEeccCCCCCh
Q 032787 96 RYLNRLRYLGYYFLDLSARGLGDP 119 (133)
Q Consensus 96 Ry~RRLRa~GY~~~~~SARGLGDp 119 (133)
+....|..+||+.+.+.-||-|+-
T Consensus 20 ~~~~~L~~~g~~Via~Dl~G~G~S 43 (256)
T d3c70a1 20 KLKPLLEALGHKVTALDLAASGVD 43 (256)
T ss_dssp THHHHHHHTTCEEEEECCTTSTTC
T ss_pred HHHHHHHhCCCEEEEEcCCCCCCC
Confidence 456788899999999999999863
No 15
>d1nxza2 c.116.1.5 (A:74-247) Hypothetical protein HI0303 {Haemophilus influenzae [TaxId: 727]}
Probab=34.25 E-value=17 Score=24.45 Aligned_cols=36 Identities=17% Similarity=0.283 Sum_probs=30.5
Q ss_pred hcceeEEecCCCCCchhhhHhHhhhcCceEEEeccC
Q 032787 79 KHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSAR 114 (133)
Q Consensus 79 k~gaLaiy~PlEGG~EGRy~RRLRa~GY~~~~~SAR 114 (133)
+.+.+.|.+=+||||.-.=..-++.+|+..+.+.-|
T Consensus 113 ~~~~i~iiIGPEGGfs~~E~~~~~~~g~~~v~LG~~ 148 (174)
T d1nxza2 113 PAGGVRLLIGSEGGLSAQEIAQTEQQGFTEILLGKR 148 (174)
T ss_dssp CTTCEEEEECCTTCCCHHHHHHHHHTTCEEEBCCSS
T ss_pred CCCcEEEEEcCCcCcCHHHHHHHHHCCCeEeeCCCC
Confidence 357799999999999998888999999988876544
No 16
>d2p10a1 c.1.12.9 (A:8-204) Uncharacterized protein Mll9387 {Mesorhizobium loti [TaxId: 381]}
Probab=33.24 E-value=22 Score=25.06 Aligned_cols=39 Identities=13% Similarity=0.151 Sum_probs=29.8
Q ss_pred ccChhhHHHHHHhcceeEEecCC-CCCchhhhHhHhhhcC
Q 032787 67 KPDLGRWLSDVEKHKAIAIYTPH-EGGYEGRYLNRLRYLG 105 (133)
Q Consensus 67 ~~d~~~f~rDlEk~gaLaiy~Pl-EGG~EGRy~RRLRa~G 105 (133)
-.|+.++++.+|+.|+-||..|+ -|.+++....-+..++
T Consensus 99 ~~nv~rtv~~~~~aG~agI~~~pk~g~~~g~~~~~~e~a~ 138 (197)
T d2p10a1 99 FMVMSTFLRELKEIGFAGVQNFPTVGLIDGLFRQNLEETG 138 (197)
T ss_dssp TCCHHHHHHHHHHHTCCEEEECSCGGGCCHHHHHHHHHTT
T ss_pred chhHHHHHHHHHHcCCeEEeccccccCccchhhhhHHHHH
Confidence 35899999999999999996554 4777887665555544
No 17
>d1usga_ c.93.1.1 (A:) Leucine-binding protein {Escherichia coli [TaxId: 562]}
Probab=33.20 E-value=15 Score=24.50 Aligned_cols=56 Identities=16% Similarity=0.232 Sum_probs=47.4
Q ss_pred ccChhhHHHHHHhcceeEEecCCCCCchhhhHhHhhhcCceEEEeccCCCCChhhh
Q 032787 67 KPDLGRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETT 122 (133)
Q Consensus 67 ~~d~~~f~rDlEk~gaLaiy~PlEGG~EGRy~RRLRa~GY~~~~~SARGLGDpeay 122 (133)
..|....++.+.+.++=+|+...-+..-.+.++-++..|+....++.-++.+++..
T Consensus 179 ~~d~~~~~~~i~~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 234 (346)
T d1usga_ 179 EKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLS 234 (346)
T ss_dssp CCCCHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEEECGGGCCTTHH
T ss_pred ccchhhHHHHhhccCCCEEEEeccchhhhheeeccccccccceEEeeeeccCcchh
Confidence 35788889999999998999887777777899999999999999998888887643
No 18
>d1qgoa_ c.92.1.2 (A:) Cobalt chelatase CbiK {Salmonella typhimurium [TaxId: 90371]}
Probab=31.51 E-value=21 Score=24.55 Aligned_cols=54 Identities=15% Similarity=0.191 Sum_probs=38.8
Q ss_pred ccChhhHHHHHHhcce-eEEecCC---CCC---------chhhhHhHhhhcCceEEEeccCCCCChhh
Q 032787 67 KPDLGRWLSDVEKHKA-IAIYTPH---EGG---------YEGRYLNRLRYLGYYFLDLSARGLGDPET 121 (133)
Q Consensus 67 ~~d~~~f~rDlEk~ga-Laiy~Pl---EGG---------~EGRy~RRLRa~GY~~~~~SARGLGDpea 121 (133)
.+++...+++|.+.|+ =-+.+|+ .|. -+..+..+|..+||.... .++|||+-..
T Consensus 176 ~P~~~~~l~~l~~~g~~~vvv~P~fl~~G~H~~~Di~~~~~~s~~~~l~~~g~~v~~-~~~~LG~~p~ 242 (257)
T d1qgoa_ 176 YPEVDILIDSLRDEGVTGVHLMPLMLVAGDHAINDMASDDGDSWKMRFNAAGIPATP-WLSGLGENPA 242 (257)
T ss_dssp SSCHHHHHHHHHHHTCCEEEEEECSSSCCHHHHTTTTSSSTTSHHHHHHHTTCCEEE-CCCCGGGSHH
T ss_pred CCCHHHHHHHHHhcCCCEEEEEehHHhccchhhhhhhhhhhHHHHHHHHhcCCeeee-eccCCCCCHH
Confidence 5999999999999885 1233454 232 234589999999998765 4799998543
No 19
>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}
Probab=29.99 E-value=8.2 Score=24.07 Aligned_cols=31 Identities=16% Similarity=0.097 Sum_probs=25.6
Q ss_pred hhHhHhhhcCceEEEeccCCCCChhhhhhhc
Q 032787 96 RYLNRLRYLGYYFLDLSARGLGDPETTLTKV 126 (133)
Q Consensus 96 Ry~RRLRa~GY~~~~~SARGLGDpeayLt~v 126 (133)
.-+++|+.+|+.+...|.|-+.+...++.+.
T Consensus 28 ~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~ 58 (232)
T d1xvia_ 28 PWLTRLREANVPVILCSSKTSAEMLYLQKTL 58 (232)
T ss_dssp HHHHHHHHTTCCEEEECSSCHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEEEEEeCCChhhchhHHHHh
Confidence 4688999999999999999888777766553
No 20
>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=29.32 E-value=8.1 Score=24.49 Aligned_cols=31 Identities=13% Similarity=0.226 Sum_probs=24.6
Q ss_pred hhHhHhhhcCceEEEeccCCCCChhhhhhhc
Q 032787 96 RYLNRLRYLGYYFLDLSARGLGDPETTLTKV 126 (133)
Q Consensus 96 Ry~RRLRa~GY~~~~~SARGLGDpeayLt~v 126 (133)
.-+++|+++|..+...|+|-+.....++.+.
T Consensus 24 ~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~ 54 (243)
T d1wzca1 24 PIIEELKDMGFEIIFNSSKTRAEQEYYRKEL 54 (243)
T ss_dssp HHHHHHHHTTEEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHh
Confidence 4588999999999999999877666555443
No 21
>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]}
Probab=28.04 E-value=22 Score=21.80 Aligned_cols=24 Identities=29% Similarity=0.479 Sum_probs=18.7
Q ss_pred hhHhHhhhcCceEEEeccCCCCCh
Q 032787 96 RYLNRLRYLGYYFLDLSARGLGDP 119 (133)
Q Consensus 96 Ry~RRLRa~GY~~~~~SARGLGDp 119 (133)
+...+|..+||+.+.+.-||-|+-
T Consensus 41 ~~~~~l~~~g~~vi~~D~~G~G~S 64 (277)
T d1brta_ 41 RQSAALLDAGYRVITYDRRGFGQS 64 (277)
T ss_dssp HHHHHHHHTTCEEEEECCTTSTTS
T ss_pred HHHHHHHhCCCEEEEEeCCCCCcc
Confidence 345667778999998888988864
No 22
>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}
Probab=27.01 E-value=12 Score=24.56 Aligned_cols=31 Identities=13% Similarity=0.040 Sum_probs=24.9
Q ss_pred hhHhHhhhcCceEEEeccCCCCChhhhhhhc
Q 032787 96 RYLNRLRYLGYYFLDLSARGLGDPETTLTKV 126 (133)
Q Consensus 96 Ry~RRLRa~GY~~~~~SARGLGDpeayLt~v 126 (133)
..+++|+.+|..+...|.|-+.....++.+.
T Consensus 25 ~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l 55 (285)
T d1nrwa_ 25 NALRQAQRDGIEVVVSTGRAHFDVMSIFEPL 55 (285)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHGGG
T ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHh
Confidence 4678888999999999999888777766554
No 23
>d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]}
Probab=26.98 E-value=9.1 Score=25.24 Aligned_cols=22 Identities=45% Similarity=0.649 Sum_probs=18.5
Q ss_pred HhhhcCceEEEeccCCCCChhhh
Q 032787 100 RLRYLGYYFLDLSARGLGDPETT 122 (133)
Q Consensus 100 RLRa~GY~~~~~SARGLGDpeay 122 (133)
++...|.+.+-+.+| +|||++-
T Consensus 170 ~~~~~gp~viEiN~R-~G~~~~~ 191 (220)
T d1vkza3 170 MLHDGDPYILEYNVR-LGDPETE 191 (220)
T ss_dssp EEETTEEEEEEEESS-CCTTHHH
T ss_pred EeeCCCEEEEEEECC-CCCCcce
Confidence 567888899999999 8999863
No 24
>d1mgpa_ c.119.1.1 (A:) Hypothetical protein TM841 {Thermotoga maritima [TaxId: 2336]}
Probab=26.04 E-value=18 Score=25.83 Aligned_cols=45 Identities=2% Similarity=-0.019 Sum_probs=34.7
Q ss_pred cccccChhhHHHHHHhcceeEEecCCCCCchhhhHhHhhhcCceE
Q 032787 64 DLLKPDLGRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYF 108 (133)
Q Consensus 64 dl~~~d~~~f~rDlEk~gaLaiy~PlEGG~EGRy~RRLRa~GY~~ 108 (133)
|.+..|...|.+.+.+.|-+.--+++-=+.--++..+|..+||.-
T Consensus 42 d~~~~~~~~fy~~~~~~~~~p~TS~ps~~~~~~~~~~~~~~gyd~ 86 (285)
T d1mgpa_ 42 EREPEEIMNFYKRIREAGSVPKTSQPSVEDFKKRYLKYKEEDYDV 86 (285)
T ss_dssp CCCHHHHHHHHHHHHHCSSCCEEECCCHHHHHHHHHHHHHTTCSE
T ss_pred CCCcCCHHHHHHHHHhCCCCCcccCCCHHHHHHHHHHHHhcCCCc
Confidence 445678899999999988876666555555667888999999973
No 25
>d1j5ya2 d.94.2.1 (A:68-174) Putative transcriptional regulator TM1602, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=25.93 E-value=13 Score=24.88 Aligned_cols=34 Identities=18% Similarity=0.178 Sum_probs=26.7
Q ss_pred ccChhhHHHHHHhcceeEEecCCCCCchhhhHhHhhhcCceEEEeccC
Q 032787 67 KPDLGRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSAR 114 (133)
Q Consensus 67 ~~d~~~f~rDlEk~gaLaiy~PlEGG~EGRy~RRLRa~GY~~~~~SAR 114 (133)
+-|+.+|++.+++..| +++..|- .||+...++|.
T Consensus 53 r~Dv~~F~~~l~~~~a-------------~~L~~LT-~GvH~HtI~a~ 86 (107)
T d1j5ya2 53 EEEVLKFVNLMEMAKT-------------EPLLTLS-GGVHLHTIEAP 86 (107)
T ss_dssp HHHHHHHHHHHHHCCS-------------CCSTTGG-GGEEEEEEEES
T ss_pred HHHHHHHHHHHhccCC-------------ccHHHhc-CCEeeEEEEeC
Confidence 4689999999999886 3456664 58888888875
No 26
>d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]}
Probab=25.91 E-value=26 Score=20.59 Aligned_cols=23 Identities=26% Similarity=0.226 Sum_probs=17.3
Q ss_pred hHhHhhhcCceEEEeccCCCCCh
Q 032787 97 YLNRLRYLGYYFLDLSARGLGDP 119 (133)
Q Consensus 97 y~RRLRa~GY~~~~~SARGLGDp 119 (133)
..+.|...||+++.+.-||-|+-
T Consensus 35 ~~~~L~~~g~~vi~~Dl~G~G~s 57 (264)
T d1r3da_ 35 VLSHLARTQCAALTLDLPGHGTN 57 (264)
T ss_dssp HHHHHTTSSCEEEEECCTTCSSC
T ss_pred HHHHHHhCCCEEEEEeccccccc
Confidence 34556667899999999998854
No 27
>d2cc0a1 c.6.2.3 (A:1-192) Acetyl-xylan esterase {Streptomyces lividans [TaxId: 1916]}
Probab=24.96 E-value=30 Score=23.08 Aligned_cols=54 Identities=17% Similarity=0.088 Sum_probs=37.6
Q ss_pred ccccccCcccccChhhHHHHHHh--cceeEEecCCCCCch-----hhhHhHhhhcCceEEEec
Q 032787 57 IGDFIGGDLLKPDLGRWLSDVEK--HKAIAIYTPHEGGYE-----GRYLNRLRYLGYYFLDLS 112 (133)
Q Consensus 57 ~~d~iggdl~~~d~~~f~rDlEk--~gaLaiy~PlEGG~E-----GRy~RRLRa~GY~~~~~S 112 (133)
.||+-.+|--..+-++.++-+++ .|++=+. +.+.-. -+.+..||++||++..+|
T Consensus 123 ~w~vd~~Dw~~~~~~~i~~~v~~~~~G~IiL~--Hd~~~~t~~aL~~ii~~lk~~Gy~fvtls 183 (192)
T d2cc0a1 123 IWDVDSQDWNNASTDAIVQAVSRLGNGQVILM--HDWPANTLAAIPRIAQTLAGKGLCSGMIS 183 (192)
T ss_dssp CCSEECCGGGTCCHHHHHHHHHTCCTTCEEEE--ESSCHHHHHHHHHHHHHHHHTTEEECEEC
T ss_pred cCCCCccccccCCHHHHHHHHhccCCCeEEEE--eCCchhHHHHHHHHHHHHHHCCCEEEEcc
Confidence 46777788777777777776654 4554443 333322 467789999999999998
No 28
>d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]}
Probab=23.74 E-value=29 Score=21.12 Aligned_cols=23 Identities=26% Similarity=0.349 Sum_probs=18.3
Q ss_pred hHhHhhhcCceEEEeccCCCCCh
Q 032787 97 YLNRLRYLGYYFLDLSARGLGDP 119 (133)
Q Consensus 97 y~RRLRa~GY~~~~~SARGLGDp 119 (133)
..+.|...||+.+.+..||.|+-
T Consensus 38 ~~~~l~~~~~~vi~~D~~G~G~S 60 (273)
T d1a8sa_ 38 QMIFLAAQGYRVIAHDRRGHGRS 60 (273)
T ss_dssp HHHHHHHTTCEEEEECCTTSTTS
T ss_pred HHHHHHhCCCEEEEEechhcCcc
Confidence 35567778999999999999863
No 29
>d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]}
Probab=23.10 E-value=29 Score=20.98 Aligned_cols=23 Identities=17% Similarity=-0.156 Sum_probs=19.0
Q ss_pred hhHhHhhhcCceEEEeccCCCCC
Q 032787 96 RYLNRLRYLGYYFLDLSARGLGD 118 (133)
Q Consensus 96 Ry~RRLRa~GY~~~~~SARGLGD 118 (133)
.+.+.|+++||.++....+|-|+
T Consensus 21 ~l~~~L~~~G~~v~~~d~p~~~~ 43 (186)
T d1uxoa_ 21 WLKKRLLADGVQADILNMPNPLQ 43 (186)
T ss_dssp HHHHHHHHTTCEEEEECCSCTTS
T ss_pred HHHHHHHhCCCEEEEeccCCCCc
Confidence 34577889999999999998886
No 30
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}
Probab=21.98 E-value=22 Score=22.92 Aligned_cols=33 Identities=24% Similarity=0.236 Sum_probs=23.7
Q ss_pred ecCCCCCchh---hhHhHhhhcCceEEEeccCCCCCh
Q 032787 86 YTPHEGGYEG---RYLNRLRYLGYYFLDLSARGLGDP 119 (133)
Q Consensus 86 y~PlEGG~EG---Ry~RRLRa~GY~~~~~SARGLGDp 119 (133)
|-| -||.|. +..+.|.+.||....++.+--+|.
T Consensus 9 y~p-~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~ 44 (370)
T d2iw1a1 9 YFP-FGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC 44 (370)
T ss_dssp ECT-TCHHHHHHHHHHHHHHHTTCCEEEEESEECSCC
T ss_pred CCC-CCCHHHHHHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 446 599875 346788999999988876554543
No 31
>d2j13a1 c.6.2.3 (A:1-235) Putative polysaccharide deacetylase BA0424 {Bacillus anthracis [TaxId: 1392]}
Probab=21.03 E-value=37 Score=23.27 Aligned_cols=50 Identities=18% Similarity=0.268 Sum_probs=35.5
Q ss_pred cccccChhhHHHHHHh-------c-c--eeEEecCCCCCchhhhHhHhhhcCceEEEecc
Q 032787 64 DLLKPDLGRWLSDVEK-------H-K--AIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSA 113 (133)
Q Consensus 64 dl~~~d~~~f~rDlEk-------~-g--aLaiy~PlEGG~EGRy~RRLRa~GY~~~~~SA 113 (133)
|+-+.+...|.+||++ . | ....+.|+.|-+--+.+.-|++.||....-+.
T Consensus 109 ~l~~ls~~~~~~ei~~~~~~l~~~~G~~~~~~~rpp~G~~~~~~~~~l~~~Gy~~~~w~~ 168 (235)
T d2j13a1 109 DFTAVNDEKLREELTSVTEEIKKVTGQKEVKYVRPPRGVFSERTLALTKEMGYYNVFWSL 168 (235)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHHHHHCCSCCCEECCGGGEECHHHHHHHHHTTCEEECCSE
T ss_pred ChhhCCHHHHHHHHHHHHHHHHHHhhccccccccCChhhhhhhhHHHHHHcCCeEeecCC
Confidence 4555566666666543 2 3 34677888888888999999999998776543
No 32
>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}
Probab=20.77 E-value=17 Score=23.73 Aligned_cols=29 Identities=14% Similarity=0.080 Sum_probs=22.2
Q ss_pred hHhHhhhcCceEEEeccCCCCChhhhhhh
Q 032787 97 YLNRLRYLGYYFLDLSARGLGDPETTLTK 125 (133)
Q Consensus 97 y~RRLRa~GY~~~~~SARGLGDpeayLt~ 125 (133)
.+++|+.+|..+...|.|-+.....++.+
T Consensus 28 ~l~~l~~~gi~~~i~TGR~~~~~~~~~~~ 56 (269)
T d1rlma_ 28 QYQELKKRGIKFVVASGNQYYQLISFFPE 56 (269)
T ss_dssp HHHHHHHHTCEEEEECSSCHHHHGGGCTT
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 46788889999999998887666655544
No 33
>d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]}
Probab=20.72 E-value=34 Score=20.82 Aligned_cols=23 Identities=22% Similarity=0.294 Sum_probs=17.2
Q ss_pred hHhHhhhcCceEEEeccCCCCCh
Q 032787 97 YLNRLRYLGYYFLDLSARGLGDP 119 (133)
Q Consensus 97 y~RRLRa~GY~~~~~SARGLGDp 119 (133)
..+.|.++||+.+.+--||-|+.
T Consensus 40 ~~~~l~~~g~~vi~~D~~G~G~s 62 (275)
T d1a88a_ 40 QMLFFLSHGYRVIAHDRRGHGRS 62 (275)
T ss_dssp HHHHHHHTTCEEEEECCTTSTTS
T ss_pred HHHHHHhCCCEEEEEeccccccc
Confidence 35567778888888888888854
No 34
>d1ji6a1 b.18.1.3 (A:503-652) delta-Endotoxin, C-terminal domain {Bacillus thuringiensis, CRY3bb1 [TaxId: 1428]}
Probab=20.68 E-value=10 Score=25.80 Aligned_cols=38 Identities=26% Similarity=0.382 Sum_probs=20.7
Q ss_pred cccCcccccChhhHHHHHHhcceeEEecCCCCC-chhhhHhHhhhc
Q 032787 60 FIGGDLLKPDLGRWLSDVEKHKAIAIYTPHEGG-YEGRYLNRLRYL 104 (133)
Q Consensus 60 ~iggdl~~~d~~~f~rDlEk~gaLaiy~PlEGG-~EGRy~RRLRa~ 104 (133)
|.|||||++--.. ....-+-+..... .-.||+=|+|.|
T Consensus 33 ~TGGdlv~l~~~~-------~~~~~~~v~~~~~~~~q~YrVRIRYA 71 (150)
T d1ji6a1 33 FTGGNLLFLKESS-------NSIAKFKVTLNSAALLQRYRVRIRYA 71 (150)
T ss_dssp SSSSCEEEESSCC-------SCSEEEEEBCCHHHHSCEEEEEEEEE
T ss_pred CCCccEEEEccCC-------CeEEEEEEEccCCCcceEEEEEEEEe
Confidence 8899999864210 0112233333222 235788888877
Done!