BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032788
(133 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 72.8 bits (177), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGEL-PPIPDSVS 83
++++ GYG ADIWS+GCT++EM T P++ + + A+FK+ ++ P IP+S+S
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMS 252
Query: 84 RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
+A+ FILKC + +P+ R A L+ F+K
Sbjct: 253 AEAKAFILKCFEPDPDKRACANDLLVDEFLK 283
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 72.4 bits (176), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGEL-PPIPDSVS 83
++++ GYG ADIWS+GCT++EM T P++ + + A+FK+ ++ P IP+S+S
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMS 238
Query: 84 RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
+A+ FILKC + +P+ R A L+ F+K
Sbjct: 239 AEAKAFILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARD 88
K+ Y ADIWS+G T++EM P+ + L KIA+ + P + P S + RD
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRD 254
Query: 89 FILKCLQVNPNDRPTAAQLMEHPFV 113
F+ L NP RP+AAQL+EHPFV
Sbjct: 255 FLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARD 88
K+ Y ADIWS+G T++EM P+ + L KIA+ + P + P S + RD
Sbjct: 187 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRD 246
Query: 89 FILKCLQVNPNDRPTAAQLMEHPFV 113
F+ L NP RP+AAQL+EHPFV
Sbjct: 247 FLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 29 VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSV-SRD 85
++ G Y D+WS+G T +E+ R P F + AL+ IA+ E P + S
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEY 242
Query: 86 ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
R+F+ CLQ P DRPT+ L++H FV R P
Sbjct: 243 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 275
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 29 VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSV-SRD 85
++ G Y D+WS+G T +E+ R P F + AL+ IA+ E P + S
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEY 281
Query: 86 ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
R+F+ CLQ P DRPT+ L++H FV R P
Sbjct: 282 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 314
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 32 SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDAR 87
SK+ Y AD+WS+G T++EM P+ + L KIA+ E P + P S + +
Sbjct: 186 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK 245
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFV 113
DF+ KCL+ N + R T +QL++HPFV
Sbjct: 246 DFLKKCLEKNVDARWTTSQLLQHPFV 271
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 32 SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDAR 87
SK+ Y AD+WS+G T++EM P+ + L KIA+ E P + P S + +
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK 271
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFV 113
DF+ KCL+ N + R T +QL++HPFV
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 32 SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDAR 87
SK+ Y AD+WS+G T++EM P+ + L KIA+ E P + P S + +
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK 271
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFV 113
DF+ KCL+ N + R T +QL++HPFV
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 32 SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDAR 87
SK+ Y AD+WS+G T++EM P+ + L KIA+ E P + P S + +
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK 271
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFV 113
DF+ KCL+ N + R T +QL++HPFV
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVSRDARDFIL 91
GY ADIWS+G T +EM PY + A+F I P P+ S + DF+
Sbjct: 201 GYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVK 260
Query: 92 KCLQVNPNDRPTAAQLMEHPFVK 114
+CL +P R TA QL++HPFV+
Sbjct: 261 QCLVKSPEQRATATQLLQHPFVR 283
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVS 83
+VV K YG DIWS+G +EM+ PY AL+ IA P + P+ +S
Sbjct: 186 EVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 243
Query: 84 RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
RDF+ +CL+++ R +A +L++H F+K P S P
Sbjct: 244 AIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTP 284
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVS 83
+VV K YG DIWS+G +EM+ PY AL+ IA P + P+ +S
Sbjct: 187 EVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 244
Query: 84 RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
RDF+ +CL+++ R +A +L++H F+K P S P
Sbjct: 245 AIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTP 285
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVS 83
+VV K YG DIWS+G +EM+ PY AL+ IA P + P+ +S
Sbjct: 187 EVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 244
Query: 84 RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
RDF+ +CL+++ R +A +L++H F+K P S P
Sbjct: 245 AIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTP 285
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVS 83
+VV K YG DIWS+G +EM+ PY AL+ IA P + P+ +S
Sbjct: 186 EVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 243
Query: 84 RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
RDF+ +CL ++ R +A +L++H F+K P S P
Sbjct: 244 AIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTP 284
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPI--PDSVS 83
+VV K YG DIWS+G +EM+ PY AL+ IA P + P+ +S
Sbjct: 186 EVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 243
Query: 84 RDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
RDF+ +CL ++ R +A +L++H F+K P S P
Sbjct: 244 AIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTP 284
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPY--FGVEWALFK-IARGELPPIP-DSVSRDARDFIL 91
GY + +DIWS+G T++E+ PY +G + K + P +P D S + DF
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS 292
Query: 92 KCLQVNPNDRPTAAQLMEHPF 112
+CL+ N +RPT +LM+HPF
Sbjct: 293 QCLKKNSKERPTYPELMQHPF 313
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPY--FGVEWALFK-IARGELPPIP-DSVSRDARDFIL 91
GY + +DIWS+G T++E+ PY +G + K + P +P D S + DF
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS 248
Query: 92 KCLQVNPNDRPTAAQLMEHPF 112
+CL+ N +RPT +LM+HPF
Sbjct: 249 QCLKKNSKERPTYPELMQHPF 269
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFK-IARGELPPIP---DSVSRDARDFILK 92
YG P D+W G + +L+ C P++G + LF+ I +G+ P +S A+D + +
Sbjct: 210 YGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 269
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
L ++P +R T + + HP++K ++ + P
Sbjct: 270 MLMLDPAERITVYEALNHPWLKERDRYAYKIHLP 303
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI 90
K Y ADIWS+G T +E+ P+ + LF I + P + + S+ ++F+
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 251
Query: 91 LKCLQVNPNDRPTAAQLMEHPFVKR 115
CL P+ RPTA +L++H F+ R
Sbjct: 252 EACLNKEPSFRPTAKELLKHKFILR 276
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFK-IARGELPPIP---DSVSRDARDFILK 92
YG P D+W G + +L+ C P++G + LF+ I +G+ P +S A+D + +
Sbjct: 212 YGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 271
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
L ++P +R T + + HP++K ++ + P
Sbjct: 272 MLMLDPAERITVYEALNHPWLKERDRYAYKIHLP 305
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFK-IARGELPPIP---DSVSRDARDFILK 92
YG P D+W G + +L+ C P++G + LF+ I +G+ P +S A+D + +
Sbjct: 210 YGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 269
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
L ++P +R T + + HP++K ++ + P
Sbjct: 270 MLMLDPAERITVYEALNHPWLKERDRYAYKIHLP 303
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI 90
K Y ADIWS+G T +E+ P+ + LF I + P + + S+ ++F+
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 236
Query: 91 LKCLQVNPNDRPTAAQLMEHPFVKR 115
CL P+ RPTA +L++H F+ R
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFILR 261
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI 90
K Y ADIWS+G T +E+ P+ + LF I + P + + S+ ++F+
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 236
Query: 91 LKCLQVNPNDRPTAAQLMEHPFVKR 115
CL P+ RPTA +L++H F+ R
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFILR 261
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI 90
K Y ADIWS+G T +E+ P+ + LF I + P + + S+ ++F+
Sbjct: 197 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFV 256
Query: 91 LKCLQVNPNDRPTAAQLMEHPFVKR 115
CL P+ RPTA +L++H F+ R
Sbjct: 257 EACLNKEPSFRPTAKELLKHKFILR 281
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI 90
K Y ADIWS+G T +E+ P + LF I + P + S+ ++F+
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFV 248
Query: 91 LKCLQVNPNDRPTAAQLMEHPFVKR 115
CL +P RPTA +L++H F+ R
Sbjct: 249 EACLNKDPRFRPTAKELLKHKFITR 273
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDS---VSRDARDFILK 92
YG DIWS+G V+EM+ PYF K+ R LPP + VS + F+ +
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 306
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
L +P R TAA+L++HPF+ + P + +P
Sbjct: 307 LLVRDPAQRATAAELLKHPFLAKAGPPASIVP 338
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDS---VSRDARDFILK 92
YG DIWS+G V+EM+ PYF K+ R LPP + VS + F+ +
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 383
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
L +P R TAA+L++HPF+ + P + +P
Sbjct: 384 LLVRDPAQRATAAELLKHPFLAKAGPPASIVP 415
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDS---VSRDARDFILK 92
YG DIWS+G V+EM+ PYF K+ R LPP + VS + F+ +
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 256
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
L +P R TAA+L++HPF+ + P + +P
Sbjct: 257 LLVRDPAQRATAAELLKHPFLAKAGPPASIVP 288
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDS---VSRDARDFILK 92
YG DIWS+G V+EM+ PYF K+ R LPP + VS + F+ +
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 261
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
L +P R TAA+L++HPF+ + P + +P
Sbjct: 262 LLVRDPAQRATAAELLKHPFLAKAGPPASIVP 293
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDS---VSRDARDFILK 92
YG DIWS+G V+EM+ PYF K+ R LPP + VS + F+ +
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 263
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
L +P R TAA+L++HPF+ + P + +P
Sbjct: 264 LLVRDPAQRATAAELLKHPFLAKAGPPASIVP 295
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDS---VSRDARDFILK 92
YG DIWS+G V+EM+ PYF K+ R LPP + VS + F+ +
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 252
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLP 124
L +P R TAA+L++HPF+ + P + +P
Sbjct: 253 LLVRDPAQRATAAELLKHPFLAKAGPPASIVP 284
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF----KIARGELPPIP-DSVSRDARDF 89
GY +DIWS+GC + EM P++G + L+ KI + + PP+P D S + R
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQL 270
Query: 90 ILKCLQVNPNDRP 102
+ C+ +P RP
Sbjct: 271 VNMCINPDPEKRP 283
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 37 YGLPADIWSVGCTVLEMLT--RCRPYFGVEWALFKIARGELPPIPDSV-SRDARDFILKC 93
Y + +DIWS+G +++EM RP + L I P +P +V S + +DF+ KC
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKC 242
Query: 94 LQVNPNDRPTAAQLMEHPFVKR 115
L NP +R QLM H F+KR
Sbjct: 243 LIKNPAERADLKQLMVHAFIKR 264
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFK-IARGELP---PIPDSVSRDARDF 89
G Y D+WS G + +L+ P++G E+ + K + G+ P ++S DA+D
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 90 ILKCLQVNPNDRPTAAQLMEHPFVKR---PLPTSWGLPT 125
I K L +P+ R TA Q +EHP++++ PT LP+
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPS 295
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRDARDFI 90
+N Y +DIW++GC + E+ T + ++ + KI G PP+ S D R +
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLV 257
Query: 91 LKCLQVNPNDRPTAAQLMEHPFVKR 115
+ + NP DRP+ ++E F+ +
Sbjct: 258 SQLFKRNPRDRPSVNSILEKGFIAK 282
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDA-------- 86
GY ADIWS G T +E+ T PY + + PP ++ +D
Sbjct: 203 GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK 262
Query: 87 --RDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
R I CLQ +P RPTAA+L+ H F ++
Sbjct: 263 SFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 34 NGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV-SRDARDFI 90
+ Y +D+WS+G T +EM P + ALF I R P + S+ + FI
Sbjct: 208 DATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFI 267
Query: 91 LKCLQVNPNDRPTAAQLMEHPFVK 114
CL N + RP QLM+HPF++
Sbjct: 268 ESCLVKNHSQRPATEQLMKHPFIR 291
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPYFGVE-WALFKIARGELPPIPDSVSRDA-------- 86
GY ADIWS G T +E+ T PY + + PP ++ +D
Sbjct: 198 GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK 257
Query: 87 --RDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
R I CLQ +P RPTAA+L+ H F ++
Sbjct: 258 SFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIPDSVSRDARDFILK 92
+GL +D+WS+GC +L RP F V+ L K+ + +P +S +A+D I +
Sbjct: 188 AHGLESDVWSLGCMFYTLLI-GRPPFDTDTVKNTLNKVVLADYE-MPSFLSIEAKDLIHQ 245
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPT 119
L+ NP DR + + +++HPF+ R T
Sbjct: 246 LLRRNPADRLSLSSVLDHPFMSRNSST 272
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPP-IPD--SVSRDARDFIL 91
YG DIWS+G V+EM+ PYF A+ +I R LPP + D VS R F+
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI-RDSLPPRVKDLHKVSSVLRGFLD 276
Query: 92 KCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTPHHF 129
L P+ R TA +L+ HPF+K P S +P +
Sbjct: 277 LMLVREPSQRATAQELLGHPFLKLAGPPSCIVPLMRQY 314
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFI 90
+ Y ADIWS+G T +E+ P + LF I + P + ++ ++FI
Sbjct: 193 QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFI 252
Query: 91 LKCLQVNPNDRPTAAQLMEHPF-VKRPLPTSW 121
CL +P+ RPTA +L++H F VK TS+
Sbjct: 253 DACLNKDPSFRPTAKELLKHKFIVKNSKKTSY 284
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPY--FGVEWALFK-IARGELPPIP-DSVSRDARDFIL 91
GY + +DIWS+G T +E+ PY +G + K + P +P D S + DF
Sbjct: 216 GYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS 275
Query: 92 KCLQVNPNDRPTAAQLMEHPF 112
+CL+ N +RPT +L +HPF
Sbjct: 276 QCLKKNSKERPTYPELXQHPF 296
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW---ALFKIARGELPPIPDSV--SRDARDFIL 91
Y + AD+WS+G +++E+ T PY + L K+ + E P +P + S D + F+
Sbjct: 206 YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVK 265
Query: 92 KCLQVNPNDRPTAAQLMEHPFVKR 115
CL + RP +L+EH F+KR
Sbjct: 266 DCLTKDHRKRPKYNKLLEHSFIKR 289
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-----EWALFKIARGELPPIP---DSVSR 84
K GY DIWS+G + ML P+ E L +I G+ ++VS
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE 257
Query: 85 DARDFILKCLQVNPNDRPTAAQLMEHPFV--KRPLPTS 120
A+D + K L V+P+ R TA Q+++HP+V K LP S
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQS 295
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGV-----EWALFKIARGELPPIP---DSVSR 84
K GY DIWS+G + ML P+ E L +I G+ ++VS
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE 257
Query: 85 DARDFILKCLQVNPNDRPTAAQLMEHPFV--KRPLPTS 120
A+D + K L V+P+ R TA Q+++HP+V K LP S
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQS 295
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 37 YGLPADIWSVGCTVLEMLT------------RCRPYFGVEWALFKIARGELPPIPDSV-S 83
Y + +DIWS+G +++EM RP + L I P +P V S
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFS 239
Query: 84 RDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
+ +DF+ KCL NP +R QLM H F+KR
Sbjct: 240 LEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 271
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIAR---GELPP-IPDSV-SRDARDF 89
Y + +DIWS+G +++EM P A+F++ E PP +P V S + +DF
Sbjct: 199 YSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 258
Query: 90 ILKCLQVNPNDRPTAAQLMEHPFVKR 115
+ KCL NP +R QLM H F+KR
Sbjct: 259 VNKCLIKNPAERADLKQLMVHAFIKR 284
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDS--VSRDARDFILK 92
Y DIWS+G V+EM+ PYF A+ ++ P + +S VS RDF+ +
Sbjct: 218 YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLER 277
Query: 93 CLQVNPNDRPTAAQLMEHPFV 113
L +P +R TA +L++HPF+
Sbjct: 278 MLVRDPQERATAQELLDHPFL 298
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFK-IARGELP-PIPD--SVSRDARDF 89
G Y D+WS G + +L+ P++G E+ + K + G+ +P ++S DA+D
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 90 ILKCLQVNPNDRPTAAQLMEHPFVKR 115
I K L +P+ R TA Q +EHP++++
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFK-IARGELP-PIPD--SVSRDARDF 89
G Y D+WS G + +L+ P++G E+ + K + G+ +P ++S DA+D
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 90 ILKCLQVNPNDRPTAAQLMEHPFVKR 115
I K L +P+ R TA Q +EHP++++
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPYFGV-----EWALFKIARGELPPIP---DSVSRDAR 87
GY DIWS+G + MLT P+ E L +I G+ +SVS A+
Sbjct: 196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFV 113
D + K L V+P+ R TAA ++ HP++
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPY---FGVEWALFKIARGELPPIPDSVSRDAR----D 88
GY + +D+WS+G T+ E+ T PY V L ++ +G+ P + +S R+ +
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFIN 264
Query: 89 FILKCLQVNPNDRPTAAQLMEHPFV 113
F+ CL + + RP +L++HPF+
Sbjct: 265 FVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELP-PIPDSVSRDARDFIL 91
YG P D+W+ G + +L P++ + + K + P P D+V+ +A+D I
Sbjct: 190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 249
Query: 92 KCLQVNPNDRPTAAQLMEHPFV 113
K L +NP+ R TAA+ ++HP++
Sbjct: 250 KMLTINPSKRITAAEALKHPWI 271
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF--KIARGEL---PPIPDSVSRDARDFI 90
GYG D+W+ G + +L P++ L I G+ P D S +D I
Sbjct: 281 GYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLI 340
Query: 91 LKCLQVNPNDRPTAAQLMEHPFVKR 115
+ LQV+P R TA Q ++HPF +R
Sbjct: 341 SRLLQVDPEARLTAEQALQHPFFER 365
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELP-PIPDSVSRDARDFIL 91
YG P D+W+ G + +L P++ + + K + P P D+V+ +A+D I
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 260
Query: 92 KCLQVNPNDRPTAAQLMEHPFV 113
K L +NP+ R TAA+ ++HP++
Sbjct: 261 KMLTINPSKRITAAEALKHPWI 282
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELPPIPDSVSRDARDFILKCLQV 96
G DIWS G + +L P+ LFK RG + IP+ ++R ++ LQV
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 248
Query: 97 NPNDRPTAAQLMEHPFVKRPLPT 119
+P R T + EH + K+ LP+
Sbjct: 249 DPLKRATIKDIREHEWFKQDLPS 271
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELPPIPDSVSRDARDFILKCLQV 96
G DIWS G + +L P+ LFK RG + IP+ ++R ++ LQV
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 248
Query: 97 NPNDRPTAAQLMEHPFVKRPLPT 119
+P R T + EH + K+ LP+
Sbjct: 249 DPLKRATIKDIREHEWFKQDLPS 271
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ N
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT-FPDFVTEGARDLISRLLKHNA 249
Query: 99 NDRPTAAQLMEHPFVK 114
+ R T A+++EHP++K
Sbjct: 250 SQRLTLAEVLEHPWIK 265
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ N
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT-FPDFVTEGARDLISRLLKHNA 249
Query: 99 NDRPTAAQLMEHPFVK 114
+ R T A+++EHP++K
Sbjct: 250 SQRLTLAEVLEHPWIK 265
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 247
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 248 QRPMLREVLEHPWI 261
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 248
Query: 99 NDRPTAAQLMEHPFV 113
+ RP +++EHP++
Sbjct: 249 SQRPMLREVLEHPWI 263
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 251
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 252 QRPXLREVLEHPWI 265
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 251
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 252 QRPMLREVLEHPWI 265
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP
Sbjct: 191 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 249
Query: 99 NDRPTAAQLMEHPFV 113
+ RP +++EHP++
Sbjct: 250 SQRPMLREVLEHPWI 264
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 272
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 273 QRPMLREVLEHPWI 286
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 248
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 249 QRPMLREVLEHPWI 262
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 245
Query: 99 NDRPTAAQLMEHPFV 113
+ RP +++EHP++
Sbjct: 246 SQRPMLREVLEHPWI 260
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP
Sbjct: 186 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 244
Query: 99 NDRPTAAQLMEHPFV 113
+ RP +++EHP++
Sbjct: 245 SQRPMLREVLEHPWI 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 245
Query: 99 NDRPTAAQLMEHPFV 113
+ RP +++EHP++
Sbjct: 246 SQRPMLREVLEHPWI 260
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 205 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 263
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 264 QRPMLREVLEHPWI 277
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 251
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 252 QRPMLREVLEHPWI 265
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 249
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 250 QRPMLREVLEHPWI 263
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 272
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 273 QRPMLREVLEHPWI 286
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 246
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 247 QRPMLREVLEHPWI 260
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 251
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 252 QRPMLREVLEHPWI 265
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 246
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 247 QRPMLREVLEHPWI 260
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 248
Query: 99 NDRPTAAQLMEHPFV 113
+ RP +++EHP++
Sbjct: 249 SQRPMLREVLEHPWI 263
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 246
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 247 QRPMLREVLEHPWI 260
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 248
Query: 99 NDRPTAAQLMEHPFV 113
+ RP +++EHP++
Sbjct: 249 SQRPMLREVLEHPWI 263
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 247
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 248 QRPMLREVLEHPWI 261
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 247
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 248 QRPMLREVLEHPWI 261
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 248
Query: 99 NDRPTAAQLMEHPFV 113
+ RP +++EHP++
Sbjct: 249 SQRPMLREVLEHPWI 263
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 245
Query: 99 NDRPTAAQLMEHPFV 113
+ RP +++EHP++
Sbjct: 246 SQRPMLREVLEHPWI 260
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 249
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 250 QRPMLREVLEHPWI 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 246
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 247 QRPMLREVLEHPWI 260
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 248
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 249 QRPMLREVLEHPWI 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNP 98
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP
Sbjct: 184 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNP 242
Query: 99 NDRPTAAQLMEHPFV 113
+ RP +++EHP++
Sbjct: 243 SQRPMLREVLEHPWI 257
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 251
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 252 QRPMLREVLEHPWI 265
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPYFGV-----EWALFKIARGELPPIP---DSVSRDAR 87
GY DIWS+G + LT P+ E L +I G+ +SVS A+
Sbjct: 196 GYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFV 113
D + K L V+P+ R TAA ++ HP++
Sbjct: 256 DLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 34 NGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWALFKIARGELPP-IPDSVSRDARDFIL 91
G YG AD++S+G T+LE+ P+ G W ++ +G LPP +S + R ++
Sbjct: 229 QGSYGTAADVFSLGLTILEVACNMELPHGGEGWQ--QLRQGYLPPEFTAGLSSELRSVLV 286
Query: 92 KCLQVNPNDRPTAAQLMEHPFVKRP 116
L+ +P R TA L+ P +++P
Sbjct: 287 MMLEPDPKLRATAEALLALPVLRQP 311
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
D+WS+G E L P+ + +I+R E PD V+ ARD I + L+ NP+
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT-FPDFVTEGARDLISRLLKHNPS 246
Query: 100 DRPTAAQLMEHPFV 113
RP +++EHP++
Sbjct: 247 QRPMLREVLEHPWI 260
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFG-VEWALF-KIARGEL---PPIPDSVSRDARDFIL 91
Y D WS+G +L P++ E LF KI G P D +S A+DFI
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFIC 243
Query: 92 KCLQVNPNDRPTAAQLMEHPFV 113
L+ +PN+R T + + HP++
Sbjct: 244 HLLEKDPNERYTCEKALSHPWI 265
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 8 GLGNALRRKWH--VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW 65
G +R+ H V+ W D ++ SK Y DIWSVGC EM+ + GV
Sbjct: 149 AFGIPVRKYTHEVVTLWYRAPDVLMGSKK--YSTTIDIWSVGCIFAEMVNGAPLFPGVSE 206
Query: 66 A--LFKIAR-------------GELP----------PIP-----DSVSRDARDFILKCLQ 95
A L +I R ELP P+P + D + K L+
Sbjct: 207 ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLK 266
Query: 96 VNPNDRPTAAQLMEHPFVKR 115
++PN R TA Q +EH + K
Sbjct: 267 LDPNQRITAKQALEHAYFKE 286
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 8 GLGNALRRKWH--VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW 65
G +R+ H V+ W D ++ SK Y DIWSVGC EM+ + GV
Sbjct: 149 AFGIPVRKYTHEIVTLWYRAPDVLMGSKK--YSTTIDIWSVGCIFAEMVNGTPLFPGVSE 206
Query: 66 A--LFKIAR-------------GELP----------PIP-----DSVSRDARDFILKCLQ 95
A L +I R ELP P+P + D + K L+
Sbjct: 207 ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLK 266
Query: 96 VNPNDRPTAAQLMEHPFVKR 115
++PN R TA Q +EH + K
Sbjct: 267 LDPNQRITAKQALEHAYFKE 286
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELP-PIPDSVSRDARDFIL 91
YG P D+W+ G + +L P++ + + K + P P D+V+ +A+D I
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 92 KCLQVNPNDRPTAAQLMEHPFV 113
K L +NP R TA++ ++HP++
Sbjct: 243 KMLTINPAKRITASEALKHPWI 264
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 57/140 (40%), Gaps = 34/140 (24%)
Query: 8 GLGNALRRKWH--VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW 65
G +R+ H V+ W D ++ SK Y DIWSVGC EM+ + GV
Sbjct: 149 AFGIPVRKYTHEVVTLWYRAPDVLMGSKK--YSTTIDIWSVGCIFAEMVNGTPLFPGVSE 206
Query: 66 A--LFKIAR-------------GELP----------PIP-----DSVSRDARDFILKCLQ 95
A L +I R ELP P+P + D + K L+
Sbjct: 207 ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLK 266
Query: 96 VNPNDRPTAAQLMEHPFVKR 115
++PN R TA Q +EH + K
Sbjct: 267 LDPNQRITAKQALEHAYFKE 286
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELP-PIPDSVSRDARDFIL 91
YG P D+W+ G + +L P++ + + K + P P D+V+ +A+D I
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 92 KCLQVNPNDRPTAAQLMEHPFV 113
K L +NP R TA++ ++HP++
Sbjct: 243 KMLTINPAKRITASEALKHPWI 264
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIA 71
R+K N + +V++ K G+ D+WS+GC + +L P+ ++ +I
Sbjct: 177 RKKTLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 234
Query: 72 RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
+ E IP ++ A I K LQ +P RPT +L+ F
Sbjct: 235 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 274
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIA 71
R+K N + +V++ K G+ D+WS+GC + +L P+ ++ +I
Sbjct: 173 RKKTLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 230
Query: 72 RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
+ E IP ++ A I K LQ +P RPT +L+ F
Sbjct: 231 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 270
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIA 71
R+K N + +V++ K G+ D+WS+GC + +L P+ ++ +I
Sbjct: 197 RKKVLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 254
Query: 72 RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
+ E IP ++ A I K LQ +P RPT +L+ F
Sbjct: 255 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 294
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIA 71
R+K N + +V++ K G+ D+WS+GC + +L P+ ++ +I
Sbjct: 173 RKKTLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 230
Query: 72 RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
+ E IP ++ A I K LQ +P RPT +L+ F
Sbjct: 231 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 270
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIA 71
R+K N + +V++ K G+ D+WS+GC + +L P+ ++ +I
Sbjct: 195 RKKVLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 252
Query: 72 RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
+ E IP ++ A I K LQ +P RPT +L+ F
Sbjct: 253 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 292
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV--EWALFKIARGEL---PPIPDSVSRDARDFIL 91
Y D+WS+G + +L P+ G + L K+ +G+ P +VS A+D I
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIK 273
Query: 92 KCLQVNPNDRPTAAQLMEHPFVK 114
+ LQ + R +A Q +EHP++K
Sbjct: 274 QMLQFDSQRRISAQQALEHPWIK 296
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIA 71
R+K N + +V++ K G+ D+WS+GC + +L P+ ++ +I
Sbjct: 171 RKKVLCGTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 228
Query: 72 RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
+ E IP ++ A I K LQ +P RPT +L+ F
Sbjct: 229 KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 268
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIARGELPPIP---DSVSRDARDF 89
YG D+WSVG +L P++ G ++ +I E I D VS +A+D
Sbjct: 226 AYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDL 285
Query: 90 ILKCLQVNPNDRPTAAQLMEHPFV 113
+ K + ++P R T Q ++HP+V
Sbjct: 286 VRKLIVLDPKKRLTTFQALQHPWV 309
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPY--FGVEWALFKIARGELPPIPDSVSRDARDFILKCL 94
Y +DIWS+GC + E+ P+ F + KI G+ IP S + + I + L
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252
Query: 95 QVNPNDRPTAAQLMEHPFV 113
+ RP+ +++E+P +
Sbjct: 253 NLKDYHRPSVEEILENPLI 271
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPY--FGVEWALFKIARGELPPIPDSVSRDARDFILKCL 94
Y +DIWS+GC + E+ P+ F + KI G+ IP S + + I + L
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252
Query: 95 QVNPNDRPTAAQLMEHPFV 113
+ RP+ +++E+P +
Sbjct: 253 NLKDYHRPSVEEILENPLI 271
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPY--FGVEWALFKIARGELPPIPDSVSRDARDFILKCL 94
Y +DIWS+GC + E+ P+ F + KI G+ IP S + + I + L
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252
Query: 95 QVNPNDRPTAAQLMEHPFV 113
+ RP+ +++E+P +
Sbjct: 253 NLKDYHRPSVEEILENPLI 271
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELP-PIPDSVSRDARDFIL 91
YG P DIW+ G + +L P++ + + K + P P D+V+ +A++ I
Sbjct: 210 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLIN 269
Query: 92 KCLQVNPNDRPTAAQLMEHPFV 113
+ L +NP R TA Q ++HP+V
Sbjct: 270 QMLTINPAKRITADQALKHPWV 291
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 40/131 (30%)
Query: 20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT------------------------ 55
+RW + ++NSK GY DIWSVGC + EML+
Sbjct: 210 TRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 56 -----------RCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTA 104
+ R Y + K+A +L P DS A D + + L NPN R T
Sbjct: 268 SQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDS---KALDLLDRMLTFNPNKRITV 324
Query: 105 AQLMEHPFVKR 115
+ + HP++++
Sbjct: 325 EEALAHPYLEQ 335
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELP-PIPDSVSRDAR 87
+ YG P DIW+ G + +L P++ + + K + P P D+V+ +A+
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFV 113
+ I + L +NP R TA + ++HP+V
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPWV 264
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 59/159 (37%), Gaps = 38/159 (23%)
Query: 7 EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW- 65
E +A + + RW + V+ K G+ D+WS GC + EM R + G +
Sbjct: 183 EDTADANKTHYVTHRWYRAPELVMQFK--GFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
Query: 66 -ALFKIARGE-LPPIPDSV------SRD------------------------ARDFILKC 93
L KI P I D V +RD A D I K
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKM 300
Query: 94 LQVNPNDRPTAAQLMEHPFVKR---PLPTSWGLPTPHHF 129
L+ NP R + Q + HP+ + PL + GL HF
Sbjct: 301 LEFNPQRRISTEQALRHPYFESLFDPLDLTEGLSERFHF 339
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 34 NGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARG----ELPPIPDSVSRDAR 87
+G Y D+WS G + +L+ C P+ G E+ + K+ +G ELP VS A+
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-KKVSESAK 259
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFVK 114
D I K L P+ R +A ++H +++
Sbjct: 260 DLIRKXLTYVPSXRISARDALDHEWIQ 286
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 206 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 262
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 263 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 322
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 323 EVEQALAHPYLEQ 335
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 59/159 (37%), Gaps = 38/159 (23%)
Query: 7 EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW- 65
E +A + + RW + V+ K G+ D+WS GC + EM R + G +
Sbjct: 183 EDTADANKTHYVTHRWYRAPELVMQFK--GFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
Query: 66 -ALFKIARGE-LPPIPDSV------SRD------------------------ARDFILKC 93
L KI P I D V +RD A D I K
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKM 300
Query: 94 LQVNPNDRPTAAQLMEHPFVKR---PLPTSWGLPTPHHF 129
L+ NP R + Q + HP+ + PL + GL HF
Sbjct: 301 LEFNPQRRISTEQALRHPYFESLFDPLDLTEGLSERFHF 339
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 190 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 246
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 307 EVEQALAHPYLEQ 319
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 206 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 262
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 263 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 322
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 323 EVEQALAHPYLEQ 335
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 194 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 250
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 251 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 310
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 311 EVEQALAHPYLEQ 323
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 186 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 242
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 243 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 303 EVEQALAHPYLEQ 315
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 186 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 242
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 243 ILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 303 EVEQALAHPYLEQ 315
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 32/110 (29%)
Query: 37 YGLPADIWSVGCTVLEMLT-----RCRPYF----------GVEWALF------KIARGEL 75
Y DIWSVGC + EMLT + + Y GV F K A+ +
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI 260
Query: 76 PPIPDSVSRD-----------ARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
+P + +D A D + K L+++ + R TAAQ + HPF +
Sbjct: 261 QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 184 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 240
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 241 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 300
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 301 EVEQALAHPYLEQ 313
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 190 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 246
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 307 EVEQALAHPYLEQ 319
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 32/110 (29%)
Query: 37 YGLPADIWSVGCTVLEMLT-----RCRPYF----------GVEWALF------KIARGEL 75
Y DIWSVGC + EMLT + + Y GV F K A+ +
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI 278
Query: 76 PPIPDSVSRD-----------ARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
+P + +D A D + K L+++ + R TAAQ + HPF +
Sbjct: 279 QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 186 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 242
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 243 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 303 EVEQALAHPYLEQ 315
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 188 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 244
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 245 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 304
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 305 EVEQALAHPYLEQ 317
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 186 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 242
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 243 ILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 303 EVEQALAHPYLEQ 315
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 184 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 240
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 241 ILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 300
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 301 EVEQALAHPYLEQ 313
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 190 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 246
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 307 EVEQALAHPYLEQ 319
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 191 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 247
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 248 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 307
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 308 EVEQALAHPYLEQ 320
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 192 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 248
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 249 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 308
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 309 EVEQALAHPYLEQ 321
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 183 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 239
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 240 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 299
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 300 EVEQALAHPYLEQ 312
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 190 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 246
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 307 EVEQALAHPYLEQ 319
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 186 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 242
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 243 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 302
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 303 EVEQALAHPYLEQ 315
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 190 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 246
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306
Query: 103 TAAQLMEHPFVKR 115
Q + HP++++
Sbjct: 307 EVEQALAHPYLEQ 319
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 34 NGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARG----ELPPIPDSVSRDAR 87
+G Y D+WS G + +L+ C P+ G E+ + K+ +G ELP VS A+
Sbjct: 224 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-KKVSESAK 282
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFVK 114
D I K L P+ R +A ++H +++
Sbjct: 283 DLIRKMLTYVPSMRISARDALDHEWIQ 309
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 34 NGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARG----ELPPIPDSVSRDAR 87
+G Y D+WS G + +L+ C P+ G E+ + K+ +G ELP VS A+
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-KKVSESAK 259
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFVK 114
D I K L P+ R +A ++H +++
Sbjct: 260 DLIRKMLTYVPSMRISARDALDHEWIQ 286
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 34 NGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARG----ELPPIPDSVSRDAR 87
+G Y D+WS G + +L+ C P+ G E+ + K+ +G ELP VS A+
Sbjct: 225 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW-KKVSESAK 283
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFVK 114
D I K L P+ R +A ++H +++
Sbjct: 284 DLIRKMLTYVPSMRISARDALDHEWIQ 310
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 36/129 (27%)
Query: 20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI--------- 70
+RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 194 TRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGS 250
Query: 71 -------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRPTAAQ 106
AR L +P + A D + K L NP+ R Q
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310
Query: 107 LMEHPFVKR 115
+ HP++++
Sbjct: 311 ALAHPYLEQ 319
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 36/129 (27%)
Query: 20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI--------- 70
+RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 195 TRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGS 251
Query: 71 -------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRPTAAQ 106
AR L +P + A D + K L NP+ R Q
Sbjct: 252 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 311
Query: 107 LMEHPFVKR 115
+ HP++++
Sbjct: 312 ALAHPYLEQ 320
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPD---SVSRDARDFILK 92
GL AD+WS+G +L+ P+ G + L I+ + + S A+DFI +
Sbjct: 189 GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 248
Query: 93 CLQVNPNDRPTAAQLMEHPFVK 114
L +P R T AQ +EH ++K
Sbjct: 249 LLVKDPKRRMTIAQSLEHSWIK 270
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 30 VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF--KIARGEL---PPIPDSVSR 84
+N + GYG D+WS G + +L P++ + L I G P D S
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 258
Query: 85 DARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
+D + + L V P R TA + + HPF ++
Sbjct: 259 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 188 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 244
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 245 ILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 304
Query: 103 TAAQLMEHPFVKR 115
Q + HP++ +
Sbjct: 305 EVEQALAHPYLAQ 317
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 30 VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF--KIARGEL---PPIPDSVSR 84
+N + GYG D+WS G + +L P++ + L I G P D S
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 258
Query: 85 DARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
+D + + L V P R TA + + HPF ++
Sbjct: 259 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 36/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKI----- 70
++ +RW + ++NSK GY DIWSVGC + EML+ RP F + L ++
Sbjct: 188 EYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILG 244
Query: 71 -----------------ARGELPPIPD-----------SVSRDARDFILKCLQVNPNDRP 102
AR L +P + A D + K L NP+ R
Sbjct: 245 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 304
Query: 103 TAAQLMEHPFVKR 115
Q + HP++ +
Sbjct: 305 EVEQALAHPYLAQ 317
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARGELP---PIPDSVSRDARDFIL 91
Y D WS+G +L P++ + LF +I + E P D +S A+DFI
Sbjct: 199 YSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIR 258
Query: 92 KCLQVNPNDRPTAAQLMEHPFV 113
++ +PN R T Q HP++
Sbjct: 259 NLMEKDPNKRYTCEQAARHPWI 280
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------RGELPPIPDSVSRDARDFILKCL 94
D+WS+GC + M P+ + + K+ E P IP+ +D +D + CL
Sbjct: 202 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 258
Query: 95 QVNPNDRPTAAQLMEHPFVK 114
+ +P R + +L+ HP+V+
Sbjct: 259 KRDPKQRISIPELLAHPYVQ 278
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 30 VNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF--KIARGEL---PPIPDSVSR 84
+N + GYG D+WS G + +L P++ + L I G P D S
Sbjct: 186 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 245
Query: 85 DARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
+D + + L V P R TA + + HPF ++
Sbjct: 246 TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------RGELPPIPDSVSRDARDFILKCL 94
D+WS+GC + M P+ + + K+ E P IP+ +D +D + CL
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 305
Query: 95 QVNPNDRPTAAQLMEHPFVK 114
+ +P R + +L+ HP+V+
Sbjct: 306 KRDPKQRISIPELLAHPYVQ 325
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFIL 91
G Y +D+WS G TV E++T PY G+ A + +GE P + D ++
Sbjct: 192 GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMV 251
Query: 92 KCLQVNPNDRPTAAQL 107
KC ++ N RPT +L
Sbjct: 252 KCWMIDENIRPTFKEL 267
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------RGELPPIPDSVSRDARDFILKCL 94
D+WS+GC + M P+ + + K+ E P IP+ +D +D + CL
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 305
Query: 95 QVNPNDRPTAAQLMEHPFVK 114
+ +P R + +L+ HP+V+
Sbjct: 306 KRDPKQRISIPELLAHPYVQ 325
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFIL 91
G Y +D+WS G TV E++T PY G+ A + +GE P + D ++
Sbjct: 210 GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMV 269
Query: 92 KCLQVNPNDRPTAAQL 107
KC ++ N RPT +L
Sbjct: 270 KCWMIDENIRPTFKEL 285
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------RGELPPIPDSVSRDARDFILKCL 94
D+WS+GC + M P+ + + K+ E P IP+ +D +D + CL
Sbjct: 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 277
Query: 95 QVNPNDRPTAAQLMEHPFVK 114
+ +P R + +L+ HP+V+
Sbjct: 278 KRDPKQRISIPELLAHPYVQ 297
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------RGELPPIPDSVSRDARDFILKCL 94
D+WS+GC + M P+ + + K+ E P IP+ +D +D + CL
Sbjct: 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 277
Query: 95 QVNPNDRPTAAQLMEHPFVK 114
+ +P R + +L+ HP+V+
Sbjct: 278 KRDPKQRISIPELLAHPYVQ 297
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG------------VEWALFKIARGELPPIPDSVSRD 85
G D+WSVG +L+ P+ G +W + A +S D
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS-------GISED 280
Query: 86 ARDFILKCLQVNPNDRPTAAQLMEHPFV 113
+DFI K L +PN R T Q +EHP++
Sbjct: 281 GKDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------RGELPPIPDSVSRDARDFILKCL 94
D+WS+GC + M P+ + + K+ E P IP+ +D +D + CL
Sbjct: 205 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 261
Query: 95 QVNPNDRPTAAQLMEHPFVK 114
+ +P R + +L+ HP+V+
Sbjct: 262 KRDPKQRISIPELLAHPYVQ 281
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------RGELPPIPDSVSRDARDFILKCL 94
D+WS+GC + M P+ + + K+ E P IP+ +D +D + CL
Sbjct: 201 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 257
Query: 95 QVNPNDRPTAAQLMEHPFVK 114
+ +P R + +L+ HP+V+
Sbjct: 258 KRDPKQRISIPELLAHPYVQ 277
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG------------VEWALFKIARGELPPIPDSVSRD 85
G D+WSVG +L+ P+ G +W + A +S D
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS-------GISED 386
Query: 86 ARDFILKCLQVNPNDRPTAAQLMEHPFV 113
+DFI K L +PN R T Q +EHP++
Sbjct: 387 GKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------RGELPPIPDSVSRDARDFILKCL 94
D+WS+GC + M P+ + + K+ E P IP+ +D +D + CL
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE---KDLQDVLKCCL 305
Query: 95 QVNPNDRPTAAQLMEHPFVK 114
+ +P R + +L+ HP+V+
Sbjct: 306 KRDPKQRISIPELLAHPYVQ 325
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 357 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 416
Query: 92 KCLQVNPNDRPTAAQL 107
+C + +P +RPT L
Sbjct: 417 QCWRKDPEERPTFEYL 432
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 34 NGGYGLPADIWSVGCTVLEMLTRCRPYFGV-EWALF-KIARG----ELPPIPDSVSRDAR 87
+G Y D+WS G + +L+ C P+ G E+ + K+ +G ELP VS A+
Sbjct: 207 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK-KVSESAK 265
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFVK 114
D I K L P+ R +A ++H +++
Sbjct: 266 DLIRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 92 KCLQVNPNDRPTAAQL 107
+C + +P +RPT L
Sbjct: 250 QCWRKDPEERPTFEYL 265
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 92 KCLQVNPNDRPTAAQL 107
+C + +P +RPT L
Sbjct: 250 QCWRKDPEERPTFEYL 265
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 92 KCLQVNPNDRPTAAQL 107
+C + +P +RPT L
Sbjct: 250 QCWRKDPEERPTFEYL 265
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 179 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 238
Query: 92 KCLQVNPNDRPTAAQL 107
+C + +P +RPT L
Sbjct: 239 QCWRKDPEERPTFEYL 254
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 92 KCLQVNPNDRPTAAQL 107
+C + +P +RPT L
Sbjct: 250 QCWRKDPEERPTFEYL 265
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 92 KCLQVNPNDRPTAAQL 107
+C + +P +RPT L
Sbjct: 250 QCWRKDPEERPTFEYL 265
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 92 KCLQVNPNDRPTAAQL 107
+C + +P +RPT L
Sbjct: 250 QCWRKDPEERPTFEYL 265
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 181 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 240
Query: 92 KCLQVNPNDRPTAAQL 107
+C + +P +RPT L
Sbjct: 241 QCWRKDPEERPTFEYL 256
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 92 KCLQVNPNDRPTAAQL 107
+C + +P +RPT L
Sbjct: 250 QCWRKDPEERPTFEYL 265
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 92 KCLQVNPNDRPTAAQL 107
+C + +P +RPT L
Sbjct: 250 QCWRKDPEERPTFEYL 265
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 29 VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF--GVEWALFKIARGEL---PPIPDSVS 83
+V + G+ D WS+G + E+LT P+ G + + +I+R L PP P +S
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMS 290
Query: 84 RDARDFILKCLQVNPNDR-----PTAAQLMEHPFVKR 115
A+D I + L +P R A ++ EH F ++
Sbjct: 291 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWA-LF-KIARGELP---PIPDSVSRDARDFIL 91
Y D WS+G +L P++ A LF +I + E P D +S A+DFI
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 92 KCLQVNPNDRPTAAQLMEHPFV 113
++ +P R T Q ++HP++
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWA-LF-KIARGELP---PIPDSVSRDARDFIL 91
Y D WS+G +L P++ A LF +I + E P D +S A+DFI
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 92 KCLQVNPNDRPTAAQLMEHPFV 113
++ +P R T Q ++HP++
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWI 276
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E++T+ R PY G+ L ++ RG P P + ++
Sbjct: 181 GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMI 240
Query: 92 KCLQVNPNDRPTAAQL 107
C + +P +RPT L
Sbjct: 241 HCWKKDPEERPTFEYL 256
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G ++E++T R PY G+ + + RG P P++ + + ++
Sbjct: 344 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMM 403
Query: 92 KCLQVNPNDRPT 103
+C + P +RPT
Sbjct: 404 RCWKNRPEERPT 415
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G ++E++T R PY G+ + + RG P P++ + + ++
Sbjct: 187 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMM 246
Query: 92 KCLQVNPNDRPT 103
+C + P +RPT
Sbjct: 247 RCWKNRPEERPT 258
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWA-LF-KIARGELP---PIPDSVSRDARDFIL 91
Y D WS+G +L P++ A LF +I + E P D +S A+DFI
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 92 KCLQVNPNDRPTAAQLMEHPFV 113
++ +P R T Q ++HP++
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWI 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
GL AD+WS+G +L+ P+ G + L ++ + S A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 93 CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 124
L +P R T ++HP++K + L ++W P
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G ++E++T R PY G+ + + RG P P++ + + ++
Sbjct: 360 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMM 419
Query: 92 KCLQVNPNDRPT 103
+C + P +RPT
Sbjct: 420 RCWKNRPEERPT 431
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
GL AD+WS+G +L+ P+ G + L ++ + S A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 93 CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 124
L +P R T ++HP++K + L ++W P
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
GL AD+WS+G +L+ P+ G + L ++ + S A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 93 CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 124
L +P R T ++HP++K + L ++W P
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
GL AD+WS+G +L+ P+ G + L ++ + S A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 93 CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 124
L +P R T ++HP++K + L ++W P
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 291
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 30/110 (27%)
Query: 34 NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIAR--------GE--------LP- 76
Y P D+WSVGC EM R +P F + ++ + GE LP
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
Query: 77 ---------PIPDSVS---RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
PI V+ +D +LKCL NP R +A + HP+ +
Sbjct: 252 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
GL AD+WS+G +L+ P+ G + L ++ + S A+DFI +
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
Query: 93 CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 124
L +P R T ++HP++K + L ++W P
Sbjct: 254 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 290
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
GL AD+WS+G +L+ P+ G + L ++ + S A+DFI +
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
Query: 93 CLQVNPNDRPTAAQLMEHPFVK-----RPLPTSWGLP 124
L +P R T ++HP++K + L ++W P
Sbjct: 254 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHP 290
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 187 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 246
Query: 92 KCLQVNPNDRPTAAQL 107
+C + P +RPT L
Sbjct: 247 QCWRKEPEERPTFEYL 262
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWA-LF-KIARGELP---PIPDSVSRDARDFIL 91
Y D WS+G +L P++ A LF +I + E P D +S A+DFI
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 92 KCLQVNPNDRPTAAQLMEHPFV 113
++ +P R T Q ++HP++
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWI 276
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 415
Query: 92 KCLQVNPNDRPTAAQL 107
+C + P +RPT L
Sbjct: 416 QCWRKEPEERPTFEYL 431
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 415
Query: 92 KCLQVNPNDRPTAAQL 107
+C + P +RPT L
Sbjct: 416 QCWRKEPEERPTFEYL 431
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 187 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 246
Query: 92 KCLQVNPNDRPTAAQL 107
+C + P +RPT L
Sbjct: 247 QCWRKEPEERPTFEYL 262
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 30/110 (27%)
Query: 34 NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIAR--------GE--------LP- 76
Y P D+WSVGC EM R +P F + ++ + GE LP
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
Query: 77 ---------PIPDSVS---RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
PI V+ +D +LKCL NP R +A + HP+ +
Sbjct: 252 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 415
Query: 92 KCLQVNPNDRPTAAQL 107
+C + P +RPT L
Sbjct: 416 QCWRKEPEERPTFEYL 431
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 180 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 239
Query: 92 KCLQVNPNDRPTAAQL 107
+C + P +RPT L
Sbjct: 240 QCWRKEPEERPTFEYL 255
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 30/110 (27%)
Query: 34 NGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIAR--------GE--------LP- 76
Y P D+WSVGC EM R +P F + ++ + GE LP
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 251
Query: 77 ---------PIPDSVS---RDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
PI V+ +D +LKCL NP R +A + HP+ +
Sbjct: 252 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 439 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 498
Query: 92 KCLQVNPNDRPT 103
+C + P +RPT
Sbjct: 499 QCWRKEPEERPT 510
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E+ T+ R PY G+ L ++ RG P P D +
Sbjct: 183 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMC 242
Query: 92 KCLQVNPNDRPTAAQL 107
+C + P +RPT L
Sbjct: 243 QCWRKEPEERPTFEYL 258
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPD---SVSRDARDFILK 92
G D+W++G +L+ P+ G + L + R + D SVS +A+DFI
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN 287
Query: 93 CLQVNPNDRPTAAQLMEHPFVK 114
LQ P R T +EHP++K
Sbjct: 288 LLQKEPRKRLTVHDALEHPWLK 309
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 58 RPYFGVEWALFKIARGELPPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
RP + L I P +P +V S + +DF+ KCL NP +R QLM H F+KR
Sbjct: 307 RPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 365
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 76 PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
P +P V S + +DF+ KCL NP +R QLM H F+KR
Sbjct: 263 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 76 PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
P +P V S + +DF+ KCL NP +R QLM H F+KR
Sbjct: 263 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ + +PY G+ E L + G PD+ D
Sbjct: 205 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 264
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NPN RPT +++
Sbjct: 265 MRMCWQFNPNMRPTFLEIV 283
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPD---SVSRDARDFILK 92
GL AD+WS+G +L+ P+ G + L I+ + + S A+DFI +
Sbjct: 210 GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 269
Query: 93 CLQVNPNDRPTAAQLMEHPFVK 114
L +P R AQ +EH ++K
Sbjct: 270 LLVKDPKRRMXIAQSLEHSWIK 291
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 76 PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
P +P V S + +DF+ KCL NP +R QLM H F+KR
Sbjct: 263 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 76 PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
P +P V S + +DF+ KCL NP +R QLM H F+KR
Sbjct: 290 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 330
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 296
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ + +PY G+ E L + G PD+ D
Sbjct: 206 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 265
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NPN RPT +++
Sbjct: 266 MRMCWQFNPNMRPTFLEIV 284
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 241
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 242 RPSDRPTFEEIQNHPWMQDVL 262
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 244
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 299
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSXECQHLIRWCLAL 241
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 242 RPSDRPTFEEIQNHPWMQDVL 262
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 247
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 302
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 242
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 297
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 76 PPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
P +P V S + +DF+ KCL NP +R QLM H F+KR
Sbjct: 263 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 246
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 247 RPSDRPTFEEIQNHPWMQDVL 267
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 38.9 bits (89), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 294
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 38.9 bits (89), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 190 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 244
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 245 RPSDRPTFEEIQNHPWMQDVL 265
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 38.9 bits (89), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 295
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 38.9 bits (89), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 244
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 299
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 38.9 bits (89), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPD---SVSRDARDFILK 92
GL AD+WS+G +L+ P+ G + L I+ + + S A+DFI +
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 255
Query: 93 CLQVNPNDRPTAAQLMEHPFVK 114
L +P R AQ +EH ++K
Sbjct: 256 LLVKDPKRRMXIAQSLEHSWIK 277
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 38.9 bits (89), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ + +PY G+ E L + G PD+ D
Sbjct: 205 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 264
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NPN RPT +++
Sbjct: 265 MRMCWQFNPNMRPTFLEIV 283
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 38.9 bits (89), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 38.9 bits (89), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 245
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 246 RPSDRPTFEEIQNHPWMQDVL 266
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 38.9 bits (89), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 247
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 302
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 33/115 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF---VKRPLP 118
AR + + + D R + + L +PN R +A + HPF V +P+P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 298
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 246
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 247 RPSDRPTFEEIQNHPWMQDVL 267
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 245
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 246 RPSDRPTFEEIQNHPWMQDVL 266
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 246
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 247 RPSDRPTFEEIQNHPWMQDVL 267
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 214 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSXECQHLIRWCLAL 268
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 269 RPSDRPTFEEIQNHPWMQDVL 289
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 288
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 289 RPSDRPTFEEIQNHPWMQDVL 309
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 226 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 280
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 281 RPSDRPTFEEIQNHPWMQDVL 301
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 273
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 274 RPSDRPTFEEIQNHPWMQDVL 294
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 288
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 289 RPSDRPTFEEIQNHPWMQDVL 309
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 239 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSXECQHLIRWCLAL 293
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 294 RPSDRPTFEEIQNHPWMQDVL 314
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 260
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 261 RPSDRPTFEEIQNHPWMQDVL 281
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSSECQHLIRWCLAL 261
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 262 RPSDRPTFEEIQNHPWMQDVL 282
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSXECQHLIRWCLAL 288
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 289 RPSDRPTFEEIQNHPWMQDVL 309
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSXECQHLIRWCLAL 261
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 262 RPSDRPTFEEIQNHPWMQDVL 282
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSXECQHLIRWCLAL 260
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 261 RPSDRPTFEEIQNHPWMQDVL 281
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 34/127 (26%)
Query: 20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGV----EWALFKIARGEL 75
+RW + +V YG P D+W++GC E+L+ + G + L + G+L
Sbjct: 165 TRWYRSPELLVGDTQ--YGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222
Query: 76 PP----------------IPD------------SVSRDARDFILKCLQVNPNDRPTAAQL 107
P IPD ++S A + CL ++P +R T QL
Sbjct: 223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQL 282
Query: 108 MEHPFVK 114
+ HP+ +
Sbjct: 283 LHHPYFE 289
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
Query: 12 ALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFK 69
+LRRK + L +++ + + D+W +G E+L P+ +
Sbjct: 175 SLRRKTMCGTLDYLPPEMIEGRM--HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRR 232
Query: 70 IARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFV----KRPLPTS 120
I + +L P SV A+D I K L+ NP++R AQ+ HP+V +R LP S
Sbjct: 233 IVKVDLK-FPASVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVRANSRRVLPPS 286
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIA 71
R+K N + +V+ K G+ DIWS+GC + +L P+ ++ +I
Sbjct: 198 RKKXLCGTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIK 255
Query: 72 RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
+ E +P ++ A I + L +P RP+ A+L+ F
Sbjct: 256 KNEY-SVPRHINPVASALIRRMLHADPTLRPSVAELLTDEF 295
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
GL AD+WS+G +L+ P+ G + L ++ + S A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL 123
L +P R T ++HP++K P T L
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK-PKDTQQAL 284
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIA 71
R+K N + +V+ K G+ DIWS+GC + +L P+ ++ +I
Sbjct: 198 RKKTLCGTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIK 255
Query: 72 RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
+ E +P ++ A I + L +P RP+ A+L+ F
Sbjct: 256 KNEY-SVPRHINPVASALIRRMLHADPTLRPSVAELLTDEF 295
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 13/107 (12%)
Query: 40 PADIWSVGCTVLEMLTRCRPYFGV--EWALFKIARGELPPIPD---SVSRDARDFILKCL 94
D+W++G +LT P+ G + I++ + + SVS+ A DFI L
Sbjct: 213 ATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLL 272
Query: 95 QVNPNDRPTAAQLMEHPFVKR--------PLPTSWGLPTPHHFIMQS 133
NP RPTA + H ++++ P TS T H + S
Sbjct: 273 VKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQDHSVRSS 319
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
GL AD+WS+G +L+ P+ G + L ++ + S A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL 123
L +P R T ++HP++K P T L
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK-PKDTQQAL 284
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 32 SKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFIL 91
S++ + LPA +WS+G + +M+ P+ + +I EL P VS D I
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGDIPFERDQ----EILEAELH-FPAHVSPDCCALIR 265
Query: 92 KCLQVNPNDRPTAAQLMEHPFVKRP 116
+CL P+ RP+ +++ P+++ P
Sbjct: 266 RCLAPKPSSRPSLEEILLDPWMQTP 290
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I RG++ VS + + I CL +
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIRGQVF-FRQRVSXECQHLIRWCLAL 261
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P DRPT ++ HP+++ L
Sbjct: 262 RPXDRPTFEEIQNHPWMQDVL 282
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 20/111 (18%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPI--------- 78
+V + Y D+WS+G + ML+ P+ G A RGE+ +
Sbjct: 194 EVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESI 253
Query: 79 -------PDS----VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
PD +S +A+D I K L + R +AAQ+++HP+V+ P
Sbjct: 254 QEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAP 304
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
GL AD+WS+G +L+ P+ G + L ++ + S A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL 123
L +P R T ++HP++K P T L
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK-PKDTQQAL 284
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
GL AD+WS+G +L+ P+ G + L ++ + S A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL 123
L +P R T ++HP++K P T L
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK-PKDTQQAL 284
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELP-PIPDSVSRDAR 87
K Y P DIW+ G + +L P++ + +A K + P P D+V+ +A+
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFV 113
I L VNP R TA Q ++ P++
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
GL AD+WS+G +L+ P+ G + L ++ + S A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL 123
L +P R T ++HP++K P T L
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK-PKDTQQAL 284
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
GL AD+WS+G +L+ P+ G + L ++ + S A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL 123
L +P R T ++HP++K P T L
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK-PKDTQQAL 284
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIAR-GELPPIPDSVSRDARD 88
K + +D W G T+ EM T + P+ G+ + L KI + GE P P+ +D +
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 250
Query: 89 FILKCLQVNPNDRPTAAQLMEHPFVKRP 116
+++C P DRPT L + +P
Sbjct: 251 VMVQCWAHKPEDRPTFVALRDFLLEAQP 278
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 202 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 261
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 262 WMIDADSRPKFRELI 276
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDS------VSRDARDFILKCLQ 95
DIWS G + +LT C P+ G +L ++ + P+ ++ A D + + L
Sbjct: 207 DIWSAGVVMYFLLTGCLPFTGT--SLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLT 264
Query: 96 VNPNDRPTAAQLMEHPFVKR 115
+P RP+AAQ++ H + K+
Sbjct: 265 KDPERRPSAAQVLHHEWFKQ 284
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 256 WMIDADSRPKFRELI 270
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 256 WMIDADSRPKFRELI 270
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 256
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 257 WMIDADSRPKFRELI 271
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELP-PIPDSVSRDAR 87
K Y P DIW+ G + +L P++ + +A K + P P D+V+ +A+
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFV 113
I L VNP R TA Q ++ P++
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 257
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 258 WMIDADSRPKFRELI 272
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 262
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 263 WMIDADSRPKFRELI 277
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 259
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 260 WMIDADSRPKFRELI 274
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 256 WMIDADSRPKFRELI 270
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 221 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 280
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 281 WMIDADSRPKFRELI 295
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 262
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 263 WMIDADSRPKFRELI 277
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIP--DSVSRDARDFILKCLQ 95
+D++S+GC + E+LT P+ G V A + +PP + +S D +LK L
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 259
Query: 96 VNPNDRPTAAQLMEHPFVK 114
NP +R A M V+
Sbjct: 260 KNPENRYQTAAEMRADLVR 278
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 257
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 258 WMIDADSRPKFRELI 272
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 256
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 257 WMIDADSRPKFRELI 271
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 257
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 258 WMIDADSRPKFRELI 272
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 258
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 259 WMIDADSRPKFRELI 273
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 259
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 260 WMIDADSRPKFRELI 274
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 258
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 259 WMIDADSRPKFRELI 273
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 258
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 259 WMIDADSRPKFRELI 273
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELP-PIPDSVSRDAR 87
K Y P DIW+ G + +L P++ + +A K + P P D+V+ +A+
Sbjct: 179 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 238
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFV 113
I L VNP R TA Q ++ P++
Sbjct: 239 SLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIA 71
R+K N + +V+ K G+ DIWS+GC + +L P+ ++ +I
Sbjct: 198 RKKDLCGTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIK 255
Query: 72 RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
+ E +P ++ A I + L +P RP+ A+L+ F
Sbjct: 256 KNEY-SVPRHINPVASALIRRMLHADPTLRPSVAELLTDEF 295
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 256 WMIDADSRPKFRELI 270
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 256 WMIDADSRPKFRELI 270
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIP--DSVSRDARDFILKCLQ 95
+D++S+GC + E+LT P+ G V A + +PP + +S D +LK L
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 259
Query: 96 VNPNDRPTAAQLMEHPFVK 114
NP +R A M V+
Sbjct: 260 KNPENRYQTAAEMRADLVR 278
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 190 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 249
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 250 WMIDADSRPKFRELI 264
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 262
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 263 WMIDADSRPKFRELI 277
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIP--DSVSRDARDFILKCLQ 95
+D++S+GC + E+LT P+ G V A + +PP + +S D +LK L
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 259
Query: 96 VNPNDRPTAAQLMEHPFVK 114
NP +R A M V+
Sbjct: 260 KNPENRYQTAAEMRADLVR 278
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIP--DSVSRDARDFILKCLQ 95
+D++S+GC + E+LT P+ G V A + +PP + +S D +LK L
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 259
Query: 96 VNPNDRPTAAQLMEHPFVK 114
NP +R A M V+
Sbjct: 260 KNPENRYQTAAEMRADLVR 278
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 262
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 263 WMIDADSRPKFRELI 277
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFG---VEWALFKIARGELPPIP--DSVSRDARDFILKCLQ 95
+D++S+GC + E+LT P+ G V A + +PP + +S D +LK L
Sbjct: 217 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 276
Query: 96 VNPNDRPTAAQLMEHPFVK 114
NP +R A M V+
Sbjct: 277 KNPENRYQTAAEMRADLVR 295
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 193 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 252
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 253 WMIDADSRPKFRELI 267
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D ++KC
Sbjct: 230 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 289
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 290 WMIDADSRPKFRELI 304
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 14 RRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIA 71
R+K N + +V+ K G+ DIWS+GC + +L P+ ++ +I
Sbjct: 182 RKKDLCGTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIK 239
Query: 72 RGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
+ E +P ++ A I + L +P RP+ A+L+ F
Sbjct: 240 KNEY-SVPRHINPVASALIRRMLHADPTLRPSVAELLTDEF 279
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIAR-GELPPIPDSVSRDARD 88
K + +D W G T+ EM T + P+ G+ + L KI + GE P P+ +D +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 246
Query: 89 FILKCLQVNPNDRPTAAQLMEHPFVKRP 116
+++C P DRPT L + +P
Sbjct: 247 VMVQCWAHKPEDRPTFVALRDFLLEAQP 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
GL AD+WS+G +L+ P+ G + L ++ + S A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 93 CLQVNPNDRPTAAQLMEHPFVK 114
L +P R T ++HP++K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGELPPIPDSVSRD---ARDFILK 92
GL AD+WS+G +L+ P+ G + L ++ + S A+DFI +
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254
Query: 93 CLQVNPNDRPTAAQLMEHPFVK 114
L +P R T ++HP++K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 40/108 (37%), Gaps = 30/108 (27%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKI------------------------ 70
Y DIWS+GC EM+TR + G LF+I
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 71 ----ARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
AR + + + D R + + L +PN R +A + HPF +
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIAR-GELPPIPDSVSRDARD 88
K + +D W G T+ EM T + P+ G+ + L KI + GE P P+ +D +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 246
Query: 89 FILKCLQVNPNDRPTAAQLMEHPFVKRP 116
+++C P DRPT L + +P
Sbjct: 247 VMVQCWAHKPEDRPTFVALRDFLLEAQP 274
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE----WALFKIARGELP-PIPDSVSRDAR 87
K Y P DIW+ G + +L P++ + +A K + P P D+V+ +A+
Sbjct: 203 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 262
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFV 113
I L VNP R TA Q ++ P++
Sbjct: 263 SLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 223 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLD 282
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 283 CWHGEPSQRPTFSELVEH 300
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIAR-GELPPIPDSVSRDARD 88
K + +D W G T+ EM T + P+ G+ + L KI + GE P P+ +D +
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 256
Query: 89 FILKCLQVNPNDRPTAAQLMEHPFVKRP 116
+++C P DRPT L + +P
Sbjct: 257 VMVQCWAHKPEDRPTFVALRDFLLEAQP 284
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIAR-GELPPIPDSVSRDARD 88
K + +D W G T+ EM T + P+ G+ + L KI + GE P P+ +D +
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 256
Query: 89 FILKCLQVNPNDRPTAAQLMEHPFVKRP 116
+++C P DRPT L + +P
Sbjct: 257 VMVQCWAHKPEDRPTFVALRDFLLEAQP 284
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPP----------------IPD 80
Y D+WS+G + +L+ P+ G + RGE P PD
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD 262
Query: 81 S----VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
+S A+D I K L + R +AAQ+++HP+V+ P + LPTP
Sbjct: 263 KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENT-LPTP 311
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 278 CWHGEPSQRPTFSELVEH 295
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 287 CWHGEPSQRPTFSELVEH 304
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPP----------------IPD 80
Y D+WS+G + +L+ P+ G + RGE P PD
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD 262
Query: 81 S----VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
+S A+D I K L + R +AAQ+++HP+V+ P + LPTP
Sbjct: 263 KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN-TLPTP 311
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 223 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 282
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 283 CWHGEPSQRPTFSELVEH 300
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 278 CWHGEPSQRPTFSELVEH 295
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 278 CWHGEPSQRPTFSELVEH 295
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 277
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 278 CWHGEPSQRPTFSELVEH 295
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIAR-GELPPIPDSVSRDARD 88
K + +D W G T+ EM T + P+ G+ + L KI + GE P P+ +D +
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 250
Query: 89 FILKCLQVNPNDRPTAAQL 107
+++C P DRPT L
Sbjct: 251 VMVQCWAHKPEDRPTFVAL 269
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 287 CWHGEPSQRPTFSELVEH 304
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEWA--LFKIAR-GELPPIPDSVSRDARD 88
K + +D W G T+ EM T + P+ G+ + L KI + GE P P+ +D +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYN 246
Query: 89 FILKCLQVNPNDRPTAAQL 107
+++C P DRPT L
Sbjct: 247 VMVQCWAHKPEDRPTFVAL 265
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 287 CWHGEPSQRPTFSELVEH 304
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 264 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 323
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 324 CWHGEPSQRPTFSELVEH 341
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ + +PY G+ E L + G PD+ D
Sbjct: 205 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 264
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RPT +++
Sbjct: 265 MRMCWQFNPKMRPTFLEIV 283
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 229 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 288
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 289 CWHGEPSQRPTFSELVEH 306
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 287 CWHGEPSQRPTFSELVEH 304
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 36.6 bits (83), Expect = 0.004, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEWAL-FKIARG-----ELPPIPD-SVSRDARDFILKCL 94
DI+S+GC +L++ + FG +++ I RG E+ + D S+ +A D I + +
Sbjct: 221 DIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMI 280
Query: 95 QVNPNDRPTAAQLMEHPF 112
+P RPTA +++ HP
Sbjct: 281 DHDPLKRPTAMKVLRHPL 298
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ + +PY G+ E L + G PD+ D
Sbjct: 202 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 261
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RPT +++
Sbjct: 262 MRMCWQFNPKMRPTFLEIV 280
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 36.6 bits (83), Expect = 0.004, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEWAL-FKIARG-----ELPPIPD-SVSRDARDFILKCL 94
DI+S+GC +L++ + FG +++ I RG E+ + D S+ +A D I + +
Sbjct: 221 DIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMI 280
Query: 95 QVNPNDRPTAAQLMEHPF 112
+P RPTA +++ HP
Sbjct: 281 DHDPLKRPTAMKVLRHPL 298
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 286
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 287 CWHGEPSQRPTFSELVEH 304
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ + +PY G+ E L + G PD+ D
Sbjct: 205 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 264
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RPT +++
Sbjct: 265 MRMCWQFNPKMRPTFLEIV 283
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 270 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 329
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 330 CWHGEPSQRPTFSELVEH 347
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 272 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 331
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 332 CWHGEPSQRPTFSELVEH 349
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 277 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 336
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 337 CWHGEPSQRPTFSELVEH 354
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 31/108 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFKIARGELPPIPDS-------------- 81
Y D+W+ GC EMLT + G E ++ +P + +
Sbjct: 202 YTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIR 261
Query: 82 ----------------VSRDARDFILKCLQVNPNDRPTAAQLMEHPFV 113
+SR+A DF+ + L +P DR TA + + HP++
Sbjct: 262 NDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ + +PY G+ E L + G PD+ D
Sbjct: 205 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 264
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RPT +++
Sbjct: 265 MRMCWQFNPKMRPTFLEIV 283
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y + +D+WS G + E+ + PY GV E ++ G PD + + +L
Sbjct: 279 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 338
Query: 93 CLQVNPNDRPTAAQLMEH 110
C P+ RPT ++L+EH
Sbjct: 339 CWHGEPSQRPTFSELVEH 356
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGEL---PPIPDSV 82
+V+N+ N YG D WS G + +L P+ GV A + ++ +L P + +
Sbjct: 244 EVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVL 303
Query: 83 SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
S ARD + L N ++R A + ++HP++ +
Sbjct: 304 SPLARDLLSNLLNRNVDERFDAMRALQHPWISQ 336
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGELPP----IPDSVSRDARDF 89
Y +D+++ G + E++T PY + + +F + RG L P + + + +
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRL 273
Query: 90 ILKCLQVNPNDRPTAAQLMEH-PFVKRPLP 118
+ +CL+ ++RP Q++ + R LP
Sbjct: 274 MAECLKKKRDERPLFPQILASIELLARSLP 303
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 36.6 bits (83), Expect = 0.004, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEWAL-FKIARG-----ELPPIPD-SVSRDARDFILKCL 94
DI+S+GC +L++ + FG +++ I RG E+ + D S+ +A D I + +
Sbjct: 235 DIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMI 294
Query: 95 QVNPNDRPTAAQLMEHPF 112
+P RPTA +++ HP
Sbjct: 295 DHDPLKRPTAMKVLRHPL 312
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 36.6 bits (83), Expect = 0.004, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEWAL-FKIARG-----ELPPIPD-SVSRDARDFILKCL 94
DI+S+GC +L++ + FG +++ I RG E+ + D S+ +A D I + +
Sbjct: 235 DIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMI 294
Query: 95 QVNPNDRPTAAQLMEHPF 112
+P RPTA +++ HP
Sbjct: 295 DHDPLKRPTAMKVLRHPL 312
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGELPP----IPDSVSRDARDF 89
Y +D+++ G + E++T PY + + +F + RG L P + + + +
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRL 273
Query: 90 ILKCLQVNPNDRPTAAQLMEH-PFVKRPLP 118
+ +CL+ ++RP Q++ + R LP
Sbjct: 274 MAECLKKKRDERPLFPQILASIELLARSLP 303
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGELPP----IPDSVSRDARDF 89
Y +D+++ G + E++T PY + + +F + RG L P + + + +
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRL 272
Query: 90 ILKCLQVNPNDRPTAAQLMEH-PFVKRPLP 118
+ +CL+ ++RP Q++ + R LP
Sbjct: 273 MAECLKKKRDERPLFPQILASIELLARSLP 302
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D + KC
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKC 257
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 258 WMIDADSRPKFRELI 272
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGELPP----IPDSVSRDARDF 89
Y +D+++ G + E++T PY + + +F + RG L P + + + +
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRL 265
Query: 90 ILKCLQVNPNDRPTAAQLMEH-PFVKRPLP 118
+ +CL+ ++RP Q++ + R LP
Sbjct: 266 MAECLKKKRDERPLFPQILASIELLARSLP 295
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGELPP----IPDSVSRDARDF 89
Y +D+++ G + E++T PY + + +F + RG L P + + + +
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRL 250
Query: 90 ILKCLQVNPNDRPTAAQLMEH-PFVKRPLP 118
+ +CL+ ++RP Q++ + R LP
Sbjct: 251 MAECLKKKRDERPLFPQILASIELLARSLP 280
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGELPP----IPDSVSRDARDF 89
Y +D+++ G + E++T PY + + +F + RG L P + + + +
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRL 247
Query: 90 ILKCLQVNPNDRPTAAQLMEH-PFVKRPLP 118
+ +CL+ ++RP Q++ + R LP
Sbjct: 248 MAECLKKKRDERPLFPQILASIELLARSLP 277
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D + KC
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKC 257
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 258 WMIDADSRPKFRELI 272
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPYFGV--EWALFKIARGELPPIPDSVSRDARDFILKC 93
G+ D WS+G + +MLT P+ G + + KI + +L +P ++++ARD + K
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL-NLPPYLTQEARDLLKKL 255
Query: 94 LQVNPNDR-----PTAAQLMEHPFVK 114
L+ N R A ++ HPF +
Sbjct: 256 LKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGELPP----IPDSVSRDARDF 89
Y +D+++ G + E++T PY + + +F + RG L P + + + +
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRL 250
Query: 90 ILKCLQVNPNDRPTAAQLMEH-PFVKRPLP 118
+ +CL+ ++RP Q++ + R LP
Sbjct: 251 MAECLKKKRDERPLFPQILASIELLARSLP 280
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPYFGV--EWALFKIARGELPPIPDSVSRDARDFILKC 93
G+ D WS+G + +MLT P+ G + + KI + +L +P ++++ARD + K
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL-NLPPYLTQEARDLLKKL 255
Query: 94 LQVNPNDR-----PTAAQLMEHPFVK 114
L+ N R A ++ HPF +
Sbjct: 256 LKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGELPP----IPDSVSRDARDF 89
Y +D+++ G + E++T PY + + +F + RG L P + + + +
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRL 245
Query: 90 ILKCLQVNPNDRPTAAQLMEH-PFVKRPLP 118
+ +CL+ ++RP Q++ + R LP
Sbjct: 246 MAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ + +PY G+ E L + G PD+ D
Sbjct: 204 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDL 263
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RPT +++
Sbjct: 264 MRMCWQFNPKMRPTFLEIV 282
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D + KC
Sbjct: 206 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKC 265
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 266 WMIDADSRPKFRELI 280
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGELPP----IPDSVSRDARDF 89
Y +D+++ G + E++T PY + + +F + RG L P + + + +
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRL 245
Query: 90 ILKCLQVNPNDRPTAAQLMEH-PFVKRPLP 118
+ +CL+ ++RP Q++ + R LP
Sbjct: 246 MAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D + KC
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKC 258
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 259 WMIDADSRPKFRELI 273
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGELPP----IPDSVSRDARDF 89
Y +D+++ G + E++T PY + + +F + RG L P + + + +
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRL 245
Query: 90 ILKCLQVNPNDRPTAAQLMEH-PFVKRPLP 118
+ +CL+ ++RP Q++ + R LP
Sbjct: 246 MAECLKKKRDERPLFPQILASIELLARSLP 275
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G TV E++T +PY G+ + + +GE P P + D + KC
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKC 255
Query: 94 LQVNPNDRPTAAQLM 108
++ + RP +L+
Sbjct: 256 WMIDADSRPKFRELI 270
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 7 EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCR-PYFGVEW 65
+G + L KW SL D + Y + +D+W+ G T+ E++TR + PY G+E
Sbjct: 195 QGCASKLPVKWLA--LESLADNL-------YTVHSDVWAFGVTMWEIMTRGQTPYAGIEN 245
Query: 66 AL---FKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPT 103
A + I L P+ + + D + +C +P RP+
Sbjct: 246 AEIYNYLIGGNRLKQPPECM-EEVYDLMYQCWSADPKQRPS 285
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I G++ VS + + I CL +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIGGQVF-FRQRVSSECQHLIRWCLAL 241
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 242 RPSDRPTFEEIQNHPWMQDVL 262
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA-LFKIARGELPPIPDSVSRDARDFIL 91
++ YG D W +G + EM+ P++ + LF++ E P ++S +A+ +
Sbjct: 181 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLA 240
Query: 92 KCLQVNPNDR-----PTAAQLMEHPF 112
L+ +P R A ++MEH F
Sbjct: 241 GLLKKDPKQRLGGGPSDAKEVMEHRF 266
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Query: 7 EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA 66
EG+ + K L +V+ + YG D W +G + EM+ P++ +
Sbjct: 159 EGISDGATMKXFCGTPEYLAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
Query: 67 -LFKIARGELPPIPDSVSRDARDFILKCLQVNPNDR-----PTAAQLMEHPF 112
LF++ E P ++S +A+ + L+ +P R A ++MEH F
Sbjct: 217 RLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 268
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA-LFKIARGELPPIPDSVSRDARDFIL 91
++ YG D W +G + EM+ P++ + LF++ E P ++S +A+ +
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLA 237
Query: 92 KCLQVNPNDR-----PTAAQLMEHPF 112
L+ +P R A ++MEH F
Sbjct: 238 GLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 35.8 bits (81), Expect = 0.007, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 29 VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF---KIARGELPPIPD---SV 82
+V+ GY D WS+G + L+ P+ + +I G+ IP+ V
Sbjct: 327 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 386
Query: 83 SRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
S A D + K L V+P R T + + HP+++
Sbjct: 387 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I G++ VS + + I CL +
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIGGQVF-FRQRVSSECQHLIRWCLAL 274
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 275 RPSDRPTFEEIQNHPWMQDVL 295
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I G++ VS + + I CL +
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIGGQVF-FRQRVSSECQHLIRWCLAL 274
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 275 RPSDRPTFEEIQNHPWMQDVL 295
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA-LFKIARGELPPIPDSVSRDARDFIL 91
++ YG D W +G + EM+ P++ + LF++ E P ++S +A+ +
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLA 237
Query: 92 KCLQVNPNDR-----PTAAQLMEHPF 112
L+ +P R A ++MEH F
Sbjct: 238 GLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Query: 7 EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA 66
EG+ + K L +V+ + YG D W +G + EM+ P++ +
Sbjct: 154 EGISDGATMKXFCGTPEYLAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
Query: 67 -LFKIARGELPPIPDSVSRDARDFILKCLQVNPNDR-----PTAAQLMEHPF 112
LF++ E P ++S +A+ + L+ +P R A ++MEH F
Sbjct: 212 RLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA-LFKIARGELPPIPDSVSRDARDFIL 91
++ YG D W +G + EM+ P++ + LF++ E P ++S +A+ +
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLA 237
Query: 92 KCLQVNPNDR-----PTAAQLMEHPF 112
L+ +P R A ++MEH F
Sbjct: 238 GLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Query: 7 EGLGNALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA 66
EG+ + K L +V+ + YG D W +G + EM+ P++ +
Sbjct: 154 EGISDGATMKXFCGTPEYLAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
Query: 67 -LFKIARGELPPIPDSVSRDARDFILKCLQVNPNDR-----PTAAQLMEHPF 112
LF++ E P ++S +A+ + L+ +P R A ++MEH F
Sbjct: 212 RLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I G++ VS + + I CL +
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIGGQVF-FRQRVSSECQHLIRWCLAL 273
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 274 RPSDRPTFEEIQNHPWMQDVL 294
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I G++ VS + + I CL +
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIGGQVF-FRQRVSSECQHLIRWCLAL 273
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 274 RPSDRPTFEEIQNHPWMQDVL 294
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 47/138 (34%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPY--FGVEWALFKIARGELPPIPDSV 82
L+ +V+ GY +DI+SVG T E+ P+ L + G +P + D+
Sbjct: 186 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 245
Query: 83 SRDARD---------------------------------------------FILKCLQVN 97
+ A + F+ +CLQ N
Sbjct: 246 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN 305
Query: 98 PNDRPTAAQLMEHPFVKR 115
P+ RP+A+ L+ H F K+
Sbjct: 306 PDARPSASTLLNHSFFKQ 323
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I G++ VS + + I CL +
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIGGQVF-FRQRVSXECQHLIRWCLAL 273
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 274 RPSDRPTFEEIQNHPWMQDVL 294
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 34/111 (30%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVE--------------------WALFK----IAR 72
YG D+W++GC V EM P F + LF A
Sbjct: 202 YGKAVDVWAIGCLVTEMFMG-EPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260
Query: 73 GELPPIPD---------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
LP I + +S D KCL ++P+ RP A+L+ H F +
Sbjct: 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 47/138 (34%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPY--FGVEWALFKIARGELPPIPDSV 82
L+ +V+ GY +DI+SVG T E+ P+ L + G +P + D+
Sbjct: 202 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 261
Query: 83 SRDARD---------------------------------------------FILKCLQVN 97
+ A + F+ +CLQ N
Sbjct: 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRN 321
Query: 98 PNDRPTAAQLMEHPFVKR 115
P+ RP+A+ L+ H F K+
Sbjct: 322 PDARPSASTLLNHSFFKQ 339
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I G++ VS + + I CL +
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIGGQVF-FRQRVSXECQHLIRWCLAL 274
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 275 RPSDRPTFEEIQNHPWMQDVL 295
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+G A +WS+G + +M+ P+ E +I G++ VS + + I CL +
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIGGQVF-FRQRVSXECQHLIRWCLAL 274
Query: 97 NPNDRPTAAQLMEHPFVKRPL 117
P+DRPT ++ HP+++ L
Sbjct: 275 RPSDRPTFEEIQNHPWMQDVL 295
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 35.4 bits (80), Expect = 0.008, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 29 VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF---KIARGELPPIPD---SV 82
+V+ GY D WS+G + L+ P+ + +I G+ IP+ V
Sbjct: 313 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 372
Query: 83 SRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
S A D + K L V+P R T + + HP+++
Sbjct: 373 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALF------KIARGELP-PIPD--SVSRDAR 87
Y D+WS+G + +L P++ +I G+ P P+ VS DA+
Sbjct: 206 YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAK 265
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFVKRPL 117
I L+ +P +R T Q M HP++ + +
Sbjct: 266 QLIRLLLKTDPTERLTITQFMNHPWINQSM 295
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIP-----DSVSRDARDFILKCLQ 95
+D++S+GC + E+LT P+ G PIP + +S D +LK L
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 259
Query: 96 VNPNDRPTAAQLMEHPFVK 114
NP +R A M V+
Sbjct: 260 KNPENRYQTAAEMRADLVR 278
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALF------KIARGELP-PIPD--SVSRDAR 87
Y D+WS+G + +L P++ +I G+ P P+ VS DA+
Sbjct: 187 YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAK 246
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFVKRPL 117
I L+ +P +R T Q M HP++ + +
Sbjct: 247 QLIRLLLKTDPTERLTITQFMNHPWINQSM 276
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFKIARGELPPIPDSVSRDARDFILKCLQ 95
Y D WS G + EML P+ G E LF R + P P + ++A+D ++K
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFV 255
Query: 96 VNPNDR-PTAAQLMEHPFVKR 115
P R + +HP +
Sbjct: 256 REPEKRLGVRGDIRQHPLFRE 276
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFKIARGELPPIPDSVSRDARDFILKCLQ 95
Y D WS G + EML P+ G E LF R + P P + ++A+D ++K
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFV 254
Query: 96 VNPNDR-PTAAQLMEHPFVKR 115
P R + +HP +
Sbjct: 255 REPEKRLGVRGDIRQHPLFRE 275
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 41/135 (30%)
Query: 20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIA----- 71
SR+ + +V+ ++ Y L D+WS+GC M+ R P+F L KIA
Sbjct: 188 SRYFKGPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 72 ----------RGELPPIPDS---------------------VSRDARDFILKCLQVNPND 100
R EL P ++ VS +A DF+ K L+ + +
Sbjct: 246 DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQE 305
Query: 101 RPTAAQLMEHPFVKR 115
R TA + M HP+ ++
Sbjct: 306 RLTALEAMTHPYFQQ 320
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 41/135 (30%)
Query: 20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIA----- 71
SR+ + +V+ ++ Y L D+WS+GC M+ R P+F L KIA
Sbjct: 188 SRYFKGPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 72 ----------RGELPPIPDS---------------------VSRDARDFILKCLQVNPND 100
R EL P ++ VS +A DF+ K L+ + +
Sbjct: 246 DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQE 305
Query: 101 RPTAAQLMEHPFVKR 115
R TA + M HP+ ++
Sbjct: 306 RLTALEAMTHPYFQQ 320
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 41/135 (30%)
Query: 20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIA----- 71
SR+ + +V+ ++ Y L D+WS+GC M+ R P+F L KIA
Sbjct: 189 SRYFKGPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246
Query: 72 ----------RGELPPIPDS---------------------VSRDARDFILKCLQVNPND 100
R EL P ++ VS +A DF+ K L+ + +
Sbjct: 247 DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQE 306
Query: 101 RPTAAQLMEHPFVKR 115
R TA + M HP+ ++
Sbjct: 307 RLTALEAMTHPYFQQ 321
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 41/135 (30%)
Query: 20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIA----- 71
SR+ + +V+ ++ Y L D+WS+GC M+ R P+F L KIA
Sbjct: 188 SRYFKGPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 72 ----------RGELPPIPDS---------------------VSRDARDFILKCLQVNPND 100
R EL P ++ VS +A DF+ K L+ + +
Sbjct: 246 DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQE 305
Query: 101 RPTAAQLMEHPFVKR 115
R TA + M HP+ ++
Sbjct: 306 RLTALEAMTHPYFQQ 320
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 41/135 (30%)
Query: 20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIA----- 71
SR+ + +V+ ++ Y L D+WS+GC M+ R P+F L KIA
Sbjct: 188 SRYFKGPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 72 ----------RGELPPIPDS---------------------VSRDARDFILKCLQVNPND 100
R EL P ++ VS +A DF+ K L+ + +
Sbjct: 246 DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQE 305
Query: 101 RPTAAQLMEHPFVKR 115
R TA + M HP+ ++
Sbjct: 306 RLTALEAMTHPYFQQ 320
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 41/135 (30%)
Query: 20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIA----- 71
SR+ + +V+ ++ Y L D+WS+GC M+ R P+F L KIA
Sbjct: 209 SRYFKGPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 266
Query: 72 ----------RGELPPIPDS---------------------VSRDARDFILKCLQVNPND 100
R EL P ++ VS +A DF+ K L+ + +
Sbjct: 267 DGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQE 326
Query: 101 RPTAAQLMEHPFVKR 115
R TA + M HP+ ++
Sbjct: 327 RLTALEAMTHPYFQQ 341
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKCLQ 95
G D+WS+G + +++ P+ G + + RG+ IP +S D + + K L
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKKFLI 249
Query: 96 VNPNDRPTAAQLME 109
+NP+ R T Q+M+
Sbjct: 250 LNPSKRGTLEQIMK 263
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ T +PY G+ E L + G L PD+ +
Sbjct: 200 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLLEL 259
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RP+ +++
Sbjct: 260 MRMCWQYNPKMRPSFLEII 278
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 41/135 (30%)
Query: 20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIA----- 71
SR+ + +V+ ++ Y L D+WS+GC M+ R P+F L KIA
Sbjct: 188 SRYFKGPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 72 ----------RGELPPIPDS---------------------VSRDARDFILKCLQVNPND 100
R EL P ++ VS +A DF+ K L+ + +
Sbjct: 246 DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQE 305
Query: 101 RPTAAQLMEHPFVKR 115
R TA + M HP+ ++
Sbjct: 306 RLTALEAMTHPYFQQ 320
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKCLQ 95
G D+WS+G + +++ P+ G + + RG+ IP +S D + + K L
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKKFLI 249
Query: 96 VNPNDRPTAAQLME 109
+NP+ R T Q+M+
Sbjct: 250 LNPSKRGTLEQIMK 263
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 19/88 (21%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRD------------ 85
GL AD+WS+G +L+ P+ G + E SVS D
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGD-------TKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 86 ARDFILKCLQVNPNDRPTAAQLMEHPFV 113
A+DFI K L R T + + HP++
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 41/135 (30%)
Query: 20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIA----- 71
SR+ + +V+ ++ Y L D+WS+GC M+ R P+F L KIA
Sbjct: 190 SRYFKGPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 247
Query: 72 ----------RGELPPIPDS---------------------VSRDARDFILKCLQVNPND 100
R EL P ++ VS +A DF+ K L+ + +
Sbjct: 248 DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQE 307
Query: 101 RPTAAQLMEHPFVKR 115
R TA + M HP+ ++
Sbjct: 308 RLTALEAMTHPYFQQ 322
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKCLQ 95
G D+WS+G + +++ P+ G + + RG+ IP +S D + + K L
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKKFLI 249
Query: 96 VNPNDRPTAAQLME 109
+NP+ R T Q+M+
Sbjct: 250 LNPSKRGTLEQIMK 263
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKCLQ 95
G D+WS+G + +++ P+ G + + RG+ IP +S D + + K L
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKKFLI 249
Query: 96 VNPNDRPTAAQLME 109
+NP+ R T Q+M+
Sbjct: 250 LNPSKRGTLEQIMK 263
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKCLQ 95
G D+WS+G + +++ P+ G + + RG+ IP +S D + + K L
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKKFLI 249
Query: 96 VNPNDRPTAAQLME 109
+NP+ R T Q+M+
Sbjct: 250 LNPSKRGTLEQIMK 263
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 37 YGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G + E++T PY G+ E + G PD+ S + +L+C
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQC 288
Query: 94 LQVNPNDRPTAAQL---MEHPFVKR 115
+ P+ RP A + +E VKR
Sbjct: 289 WKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 41/135 (30%)
Query: 20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIA----- 71
SR+ + +V+ ++ Y L D+WS+GC M+ R P+F L KIA
Sbjct: 189 SRYFKGPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246
Query: 72 ----------RGELPPIPDS---------------------VSRDARDFILKCLQVNPND 100
R EL P ++ VS +A DF+ K L+ + +
Sbjct: 247 DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQE 306
Query: 101 RPTAAQLMEHPFVKR 115
R TA + M HP+ ++
Sbjct: 307 RLTALEAMTHPYFQQ 321
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ T +PY G+ E L + G L PD+ +
Sbjct: 200 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL 259
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RP+ +++
Sbjct: 260 MRMCWQYNPKMRPSFLEII 278
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKCLQ 95
G D+WS+G + +++ P+ G + + RG+ IP +S D + + K L
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKKFLI 242
Query: 96 VNPNDRPTAAQLME 109
+NP+ R T Q+M+
Sbjct: 243 LNPSKRGTLEQIMK 256
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 41/135 (30%)
Query: 20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIA----- 71
SR+ + +V+ ++ Y L D+WS+GC M+ R P+F L KIA
Sbjct: 188 SRYFKGPELLVDLQDYDYSL--DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 72 ----------RGELPPIPDS---------------------VSRDARDFILKCLQVNPND 100
R EL P ++ VS +A DF+ K L+ + +
Sbjct: 246 DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQE 305
Query: 101 RPTAAQLMEHPFVKR 115
R TA + M HP+ ++
Sbjct: 306 RLTALEAMTHPYFQQ 320
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ T +PY G+ E L + G L PD+ +
Sbjct: 198 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLLEL 257
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RP+ +++
Sbjct: 258 MRMCWQYNPKMRPSFLEII 276
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ T +PY G+ E L + G L PD+ +
Sbjct: 235 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL 294
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RP+ +++
Sbjct: 295 MRMCWQYNPKMRPSFLEII 313
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 37 YGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G + E++T PY G+ E + G PD+ S + +L+C
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQC 288
Query: 94 LQVNPNDRPTAAQL---MEHPFVKR 115
+ P+ RP A + +E VKR
Sbjct: 289 WKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 37 YGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G + E++T PY G+ E + G PD+ S + +L+C
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQC 288
Query: 94 LQVNPNDRPTAAQL---MEHPFVKR 115
+ P+ RP A + +E VKR
Sbjct: 289 WKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ T +PY G+ E L + G L PD+ +
Sbjct: 204 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL 263
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RP+ +++
Sbjct: 264 MRMCWQYNPKMRPSFLEII 282
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ T +PY G+ E L + G L PD+ +
Sbjct: 207 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL 266
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RP+ +++
Sbjct: 267 MRMCWQYNPKMRPSFLEII 285
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 39/115 (33%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWALFKIARGEL---PP 77
Y D+WS+GC + M+ R P+F G E I + + P
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 267
Query: 78 IPDSVSRDAR--------------------DFILKCLQVNPNDRPTAAQLMEHPF 112
D + R +R DF+ K L+ + R TA + MEHP+
Sbjct: 268 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 322
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELPPIPDSVSRDARDFILKCLQV 96
G D+WS G + ML R P+ LFK + +P +S A I + L V
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 249
Query: 97 NPNDRPTAAQLMEHPFVKRPLP 118
NP +R + ++M+ + K LP
Sbjct: 250 NPLNRISIHEIMQDDWFKVDLP 271
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 19/88 (21%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRD------------ 85
GL AD+WS+G +L+ P+ G + E SVS D
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGD-------TKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 86 ARDFILKCLQVNPNDRPTAAQLMEHPFV 113
A+DFI K L R T + + HP++
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 39/115 (33%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWALFKIARGEL---PP 77
Y D+WS+GC + M+ R P+F G E I + + P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 78 IPDSVSRDAR--------------------DFILKCLQVNPNDRPTAAQLMEHPF 112
D + R +R DF+ K L+ + R TA + MEHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ T +PY G+ E L + G L PD+ +
Sbjct: 206 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL 265
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RP+ +++
Sbjct: 266 MRMCWQYNPKMRPSFLEII 284
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ T +PY G+ E L + G L PD+ +
Sbjct: 206 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL 265
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RP+ +++
Sbjct: 266 MRMCWQYNPKMRPSFLEII 284
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 39/115 (33%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWALFKIARGEL---PP 77
Y D+WS+GC + M+ R P+F G E I + + P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 78 IPDSVSRDAR--------------------DFILKCLQVNPNDRPTAAQLMEHPF 112
D + R +R DF+ K L+ + R TA + MEHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 39/115 (33%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWALFKIARGEL---PP 77
Y D+WS+GC + M+ R P+F G E I + + P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 78 IPDSVSRDAR--------------------DFILKCLQVNPNDRPTAAQLMEHPF 112
D + R +R DF+ K L+ + R TA + MEHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 39/115 (33%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWALFKIARGEL---PP 77
Y D+WS+GC + M+ R P+F G E I + + P
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 267
Query: 78 IPDSVSRDAR--------------------DFILKCLQVNPNDRPTAAQLMEHPF 112
D + R +R DF+ K L+ + R TA + MEHP+
Sbjct: 268 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 322
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 39/115 (33%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWALFKIARGEL---PP 77
Y D+WS+GC + M+ R P+F G E I + + P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 78 IPDSVSRDAR--------------------DFILKCLQVNPNDRPTAAQLMEHPF 112
D + R +R DF+ K L+ + R TA + MEHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 39/115 (33%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWALFKIARGEL---PP 77
Y D+WS+GC + M+ R P+F G E I + + P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 78 IPDSVSRDAR--------------------DFILKCLQVNPNDRPTAAQLMEHPF 112
D + R +R DF+ K L+ + R TA + MEHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ T +PY G+ E L + G L PD+ +
Sbjct: 213 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL 272
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RP+ +++
Sbjct: 273 MRMCWQYNPKMRPSFLEII 291
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 39/115 (33%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWALFKIARGEL---PP 77
Y D+WS+GC + M+ R P+F G E I + + P
Sbjct: 207 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 266
Query: 78 IPDSVSRDAR--------------------DFILKCLQVNPNDRPTAAQLMEHPF 112
D + R +R DF+ K L+ + R TA + MEHP+
Sbjct: 267 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 321
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 39/115 (33%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWALFKIARGEL---PP 77
Y D+WS+GC + M+ R P+F G E I + + P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 78 IPDSVSRDAR--------------------DFILKCLQVNPNDRPTAAQLMEHPF 112
D + R +R DF+ K L+ + R TA + MEHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 39/115 (33%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWALFKIARGEL---PP 77
Y D+WS+GC + M+ R P+F G E I + + P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 78 IPDSVSRDAR--------------------DFILKCLQVNPNDRPTAAQLMEHPF 112
D + R +R DF+ K L+ + R TA + MEHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELPPIPDSVSRDARDFILKCLQV 96
G D+WS G + ML R P+ LFK + +P +S A I + L V
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 250
Query: 97 NPNDRPTAAQLMEHPFVKRPLP 118
NP +R + ++M+ + K LP
Sbjct: 251 NPLNRISIHEIMQDDWFKVDLP 272
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 39/115 (33%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWALFKIARGEL---PP 77
Y D+WS+GC + M+ R P+F G E I + + P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 78 IPDSVSRDAR--------------------DFILKCLQVNPNDRPTAAQLMEHPF 112
D + R +R DF+ K L+ + R TA + MEHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELPPIPDSVSRDARDFILKCLQV 96
G D+WS G + ML R P+ LFK + +P +S A I + L V
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 244
Query: 97 NPNDRPTAAQLMEHPFVKRPLP 118
NP +R + ++M+ + K LP
Sbjct: 245 NPLNRISIHEIMQDDWFKVDLP 266
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ T +PY G+ E L + G L PD+ +
Sbjct: 213 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL 272
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RP+ +++
Sbjct: 273 MRMCWQYNPKMRPSFLEII 291
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 34.7 bits (78), Expect = 0.014, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV--EWALFKIARGEL---PPIPDSVSRDARDFIL 91
Y D+WS G + +L P+ G + L ++ +G+ PP VS +A+ +
Sbjct: 182 YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVK 241
Query: 92 KCLQVNPNDRPTAAQLMEHPFV 113
L P+ R +A + + HP++
Sbjct: 242 LMLTYEPSKRISAEEALNHPWI 263
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 19/88 (21%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRD------------ 85
GL AD+WS+G +L+ P+ G + E SVS D
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGD-------TKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 86 ARDFILKCLQVNPNDRPTAAQLMEHPFV 113
A+DFI K L R T + + HP++
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ T +PY G+ E L + G L PD+ +
Sbjct: 203 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL 262
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RP+ +++
Sbjct: 263 MRMCWQYNPKMRPSFLEII 281
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E++T R PY G+ + + RG PD+ + +
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 254
Query: 92 KCLQVNPNDRPT 103
C + P DRPT
Sbjct: 255 LCWKERPEDRPT 266
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVE-WALFK-IARGELPPIPDSVSRDARDFILKCLQ 95
G AD+WS+G + ++ P+ AL+K I RG+ +P +S + + + LQ
Sbjct: 188 GSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYD-VPKWLSPSSILLLQQMLQ 246
Query: 96 VNPNDRPTAAQLMEHPFVKRP--LPTSWGLPTP 126
V+P R + L+ HP++ + P W P
Sbjct: 247 VDPKKRISMKNLLNHPWIMQDYNYPVEWQSKNP 279
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 39/115 (33%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWALFKIARGEL---PP 77
Y D+WS+GC + M+ R P+F G E I + + P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 78 IPDSVSRDAR--------------------DFILKCLQVNPNDRPTAAQLMEHPF 112
D + R +R DF+ K L+ + R TA + MEHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-RPYFGV--EWALFKIARGELPPIPDSVSRDARDF 89
K+G + +D+WS G + E+ T +PY G+ E L + G L PD+ +
Sbjct: 207 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFEL 266
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ C Q NP RP+ +++
Sbjct: 267 MRMCWQYNPKMRPSFLEII 285
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 39/115 (33%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWALFKIARGEL---PP 77
Y D+WS+GC + M+ R P+F G E I + + P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 78 IPDSVSRDAR--------------------DFILKCLQVNPNDRPTAAQLMEHPF 112
D + R +R DF+ K L+ + R TA + MEHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 39/115 (33%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWALFKIARGEL---PP 77
Y D+WS+GC + M+ R P+F G E I + + P
Sbjct: 214 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 273
Query: 78 IPDSVSRDAR--------------------DFILKCLQVNPNDRPTAAQLMEHPF 112
D + R +R DF+ K L+ + R TA + MEHP+
Sbjct: 274 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 328
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELPPIPDSVSRDARDFILKCLQV 96
G D+WS G + ML R P+ LFK + +P +S A I + L V
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 240
Query: 97 NPNDRPTAAQLMEHPFVKRPLP 118
NP +R + ++M+ + K LP
Sbjct: 241 NPLNRISIHEIMQDDWFKVDLP 262
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E++T R PY G+ + + RG PD+ + +
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 250
Query: 92 KCLQVNPNDRPT 103
C + P DRPT
Sbjct: 251 LCWKERPEDRPT 262
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 29 VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF---KIARGELPPIPD---SV 82
+V+ GY D WS+G + L+ P+ + +I G+ IP+ V
Sbjct: 194 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 253
Query: 83 SRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
S A D + K L V+P R T + + HP+++
Sbjct: 254 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E++T R PY G+ + + RG PD+ + +
Sbjct: 193 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 252
Query: 92 KCLQVNPNDRPT 103
C + P DRPT
Sbjct: 253 LCWKERPEDRPT 264
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF---------KIARGELPPIPDS---V 82
GY D+WS+G + ML+ P+ + +L KI +G+ ++ V
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNV 243
Query: 83 SRDARDFILKCLQVNPNDR 101
S++A+D I L V+PN R
Sbjct: 244 SQEAKDLIQGLLTVDPNKR 262
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E++T R PY G+ + + RG PD+ + +
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 250
Query: 92 KCLQVNPNDRPT 103
C + P DRPT
Sbjct: 251 LCWKERPEDRPT 262
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E++T R PY G+ + + RG PD+ + +
Sbjct: 190 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 249
Query: 92 KCLQVNPNDRPT 103
C + P DRPT
Sbjct: 250 LCWKERPEDRPT 261
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 29 VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF---KIARGELPPIPD---SV 82
+V+ GY D WS+G + L+ P+ + +I G+ IP+ V
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 83 SRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
S A D + K L V+P R T + + HP+++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E++T R PY G+ + + RG PD+ + +
Sbjct: 194 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 253
Query: 92 KCLQVNPNDRPT 103
C + P DRPT
Sbjct: 254 LCWKERPEDRPT 265
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
YG D++++G + E+L C F + G + I D + + + K L
Sbjct: 198 YGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFD---KKEKTLLQKLLSK 254
Query: 97 NPNDRPTAAQLM 108
P DRP ++++
Sbjct: 255 KPEDRPNTSEIL 266
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 29 VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF---KIARGELPPIPD---SV 82
+V+ GY D WS+G + L+ P+ + +I G+ IP+ V
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 83 SRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
S A D + K L V+P R T + + HP+++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 29 VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF---KIARGELPPIPD---SV 82
+V+ GY D WS+G + L+ P+ + +I G+ IP+ V
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 83 SRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
S A D + K L V+P R T + + HP+++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 29 VVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF---KIARGELPPIPD---SV 82
+V+ GY D WS+G + L+ P+ + +I G+ IP+ V
Sbjct: 187 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 246
Query: 83 SRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
S A D + K L V+P R T + + HP+++
Sbjct: 247 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E++T R PY G+ + + RG PD+ + +
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 244
Query: 92 KCLQVNPNDRPT 103
C + P DRPT
Sbjct: 245 LCWKERPEDRPT 256
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGEL---PPIPDSVSRDARDFILK 92
GL AD+WS+G +L+ P+ G + L I S A+DFI K
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255
Query: 93 CLQVNPNDRPTAAQLMEHPFVKRPLPTSWGL 123
L R T + + HP++ P+ T +
Sbjct: 256 LLVKETRKRLTIQEALRHPWIT-PVDTQQAM 285
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 58 RPYFGVEWALFKIARGELPPIPDSV-SRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
RP + L I P +P+ V + D ++F+ KCL NP +R L H F+KR
Sbjct: 259 RPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLTNHTFIKR 317
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E++T R PY G+ + + RG PD+ + +
Sbjct: 186 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 245
Query: 92 KCLQVNPNDRPT 103
C + P DRPT
Sbjct: 246 LCWKERPEDRPT 257
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E++T R PY G+ + + RG PD+ + +
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 244
Query: 92 KCLQVNPNDRPT 103
C + P DRPT
Sbjct: 245 LCWKERPEDRPT 256
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E++T R PY G+ + + RG PD+ + +
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 244
Query: 92 KCLQVNPNDRPT 103
C + P DRPT
Sbjct: 245 LCWKERPEDRPT 256
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
YG D++++G + E+L C F + G I D + + + K L
Sbjct: 212 YGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG---IISDIFDKKEKTLLQKLLSK 268
Query: 97 NPNDRPTAAQLM 108
P DRP ++++
Sbjct: 269 KPEDRPNTSEIL 280
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 39/115 (33%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVEWALFKIARGEL---PP 77
Y D+WS+GC + M+ R P+F G E I + + P
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 78 IPDSVSRDAR--------------------DFILKCLQVNPNDRPTAAQLMEHPF 112
D + R +R DF+ K L+ + R TA + MEHP+
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E++T R PY G+ + + RG PD+ + +
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 244
Query: 92 KCLQVNPNDRPT 103
C + P DRPT
Sbjct: 245 LCWKERPEDRPT 256
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E++T R PY G+ + + RG PD+ + +
Sbjct: 187 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 246
Query: 92 KCLQVNPNDRPT 103
C + P DRPT
Sbjct: 247 LCWKERPEDRPT 258
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 32/109 (29%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---------GVEWALF------------KIARGEL 75
Y P D+WSVGC EM R +P F G + L + RG
Sbjct: 188 YATPVDMWSVGCIFAEMFRR-KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAF 246
Query: 76 PP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
PP +P+ A+ +L+ L NP+ R +A + ++H ++ +
Sbjct: 247 PPRGPRPVQSVVPEMEESGAQ-LLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E++T R PY G+ + + RG PD+ + +
Sbjct: 181 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 240
Query: 92 KCLQVNPNDRPT 103
C + P DRPT
Sbjct: 241 LCWKERPEDRPT 252
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTRCR-PYFGVE--WALFKIARGELPPIPDSVSRDARDFIL 91
G + + +D+WS G + E++T R PY G+ + + RG PD+ + +
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR 239
Query: 92 KCLQVNPNDRPT 103
C + P DRPT
Sbjct: 240 LCWKERPEDRPT 251
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 34.3 bits (77), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 43/121 (35%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPYFGV----EW-----------ALFKIA--------- 71
GY DIWSVGC + E++ C + G +W A F A
Sbjct: 201 GYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYV 260
Query: 72 --RGELPPI-----------PDSVSRD------ARDFILKCLQVNPNDRPTAAQLMEHPF 112
R + P I P RD ARD + K L ++P+ R + + + HP+
Sbjct: 261 ENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPY 320
Query: 113 V 113
+
Sbjct: 321 I 321
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 34.3 bits (77), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 32/109 (29%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---------GVEWALF------------KIARGEL 75
Y P D+WSVGC EM R +P F G + L + RG
Sbjct: 188 YATPVDMWSVGCIFAEMFRR-KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAF 246
Query: 76 PP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
PP +P+ A+ +L+ L NP+ R +A + ++H ++ +
Sbjct: 247 PPRGPRPVQSVVPEMEESGAQ-LLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 34.3 bits (77), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 32/109 (29%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---------GVEWALF------------KIARGEL 75
Y P D+WSVGC EM R +P F G + L + RG
Sbjct: 196 YATPVDMWSVGCIFAEMFRR-KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAF 254
Query: 76 PP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
PP +P+ A+ +L+ L NP+ R +A + ++H ++ +
Sbjct: 255 PPRGPRPVQSVVPEMEESGAQ-LLLEMLTFNPHKRISAFRALQHSYLHK 302
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 34.3 bits (77), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 32/109 (29%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---------GVEWALF------------KIARGEL 75
Y P D+WSVGC EM R +P F G + L + RG
Sbjct: 188 YATPVDMWSVGCIFAEMFRR-KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAF 246
Query: 76 PP---------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
PP +P+ A+ +L+ L NP+ R +A + ++H ++ +
Sbjct: 247 PPRGPRPVQSVVPEMEESGAQ-LLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 50/136 (36%), Gaps = 40/136 (29%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVE--WALFKIARGELPPI 78
Y D+WS+GC + M+ R P+F G E + K +L P
Sbjct: 210 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPH 269
Query: 79 PDS---------------------VSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKRPL 117
+ VS +A D + K L+ + R TA + MEHP+ P+
Sbjct: 270 FNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF-YPV 328
Query: 118 PTSWGLPTPHHFIMQS 133
P+ + ++ S
Sbjct: 329 VKEQSQPSADNAVLSS 344
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 34.3 bits (77), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGEL---PPIPDSVSRDARDFILK 92
GL AD+WS+G +L+ P+ G + L I S A+DFI K
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255
Query: 93 CLQVNPNDRPTAAQLMEHPFV 113
L R T + + HP++
Sbjct: 256 LLVKETRKRLTIQEALRHPWI 276
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 41 ADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKCLQVN 97
+D+WS G T+ E++T +PY G+ + +GE P P + D ++KC ++
Sbjct: 223 SDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMID 282
Query: 98 PNDRPTAAQL 107
+ RP +L
Sbjct: 283 ADSRPKFKEL 292
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 40 PADIWSVGCTVLEMLTRCRPYFGV--EWALFKIARGELPPIPDS---VSRDARDFILKCL 94
D+WS+G V +L+ P+ + + I E ++ +S +A DF+ + L
Sbjct: 183 ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLL 242
Query: 95 QVNPNDRPTAAQLMEHPFVKRPLP 118
R TA++ ++HP++K+ +
Sbjct: 243 VKERKSRMTASEALQHPWLKQKIE 266
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFG--VEWALFKIARGEL---PPIPDSVSRDARDFILK 92
GL AD+WS+G +L+ P+ G + L I S A+DFI K
Sbjct: 196 GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255
Query: 93 CLQVNPNDRPTAAQLMEHPFV 113
L R T + + HP++
Sbjct: 256 LLVKETRKRLTIQEALRHPWI 276
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 41 ADIWSVGCTVLEML-TRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
ADI+++ TV+ P G +W +I +G LP IP +S++ + + + +P
Sbjct: 208 ADIFALALTVVXAAGAEPLPRNGDQW--HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPE 265
Query: 100 DRPTAAQLMEHPFV 113
RP+A L++H +
Sbjct: 266 RRPSAMALVKHSVL 279
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/81 (20%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIA----RGELPPIPDSVSRDARD 88
+ Y D++S G + E++TR +P+ + F+I G PP+ ++ +
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIES 236
Query: 89 FILKCLQVNPNDRPTAAQLME 109
+ +C +P+ RP+ ++++
Sbjct: 237 LMTRCWSKDPSQRPSMEEIVK 257
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPY-------FGVEWALFKIARGELPPIPDSVSRD 85
+ Y D++S G + E++TR +P+ F + WA + G PP+ ++ +
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA---VHNGTRPPLIKNLPKP 232
Query: 86 ARDFILKCLQVNPNDRPTAAQLME 109
+ +C +P+ RP+ ++++
Sbjct: 233 IESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F E KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 41 ADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKCLQVN 97
+D+WS G T+ E++T +PY G+ + +GE P P + D ++KC ++
Sbjct: 200 SDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMID 259
Query: 98 PNDRPTAAQL 107
+ RP +L
Sbjct: 260 ADSRPKFKEL 269
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 39/115 (33%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF----------------GVE--WALFKIARGELPPI 78
Y D+WS+GC + M+ R P+F G E + K +L P
Sbjct: 215 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPH 274
Query: 79 PDS---------------------VSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
+ VS +A D + K L+ + R TA + MEHP+
Sbjct: 275 FNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 329
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 57/141 (40%), Gaps = 35/141 (24%)
Query: 19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIAR------ 72
V+RW + + ++ YG+ D+W+VGC + E+L R P+ + L ++ R
Sbjct: 174 VTRWYRAPELLFGARM--YGVGVDMWAVGCILAELLLRV-PFLPGDSDLDQLTRIFETLG 230
Query: 73 -------GELPPIPDSVS-----------------RDARDFILKCLQVNPNDRPTAAQLM 108
++ +PD V+ D D I NP R TA Q +
Sbjct: 231 TPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL 290
Query: 109 EHP-FVKRPLPT-SWGLPTPH 127
+ F RP PT LP P+
Sbjct: 291 KMKYFSNRPGPTPGCQLPRPN 311
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 33.5 bits (75), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELPPIPDSVSRDARDFIL 91
++ YG D W +G + EM+ P++ + LF++ E P ++ +A+ +
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 381
Query: 92 KCLQVNPNDR-----PTAAQLMEHPF 112
L+ +P R A ++M+H F
Sbjct: 382 GLLKKDPKQRLGGGSEDAKEIMQHRF 407
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 16/19 (84%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
YG+P D+WS+GC + E+LT
Sbjct: 276 YGMPIDMWSLGCILAELLT 294
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
DF+ +CL+ +P R T Q + HP+++R LP
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 16/19 (84%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
YG+P D+WS+GC + E+LT
Sbjct: 276 YGMPIDMWSLGCILAELLT 294
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
DF+ +CL+ +P R T Q + HP+++R LP
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 16/19 (84%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
YG+P D+WS+GC + E+LT
Sbjct: 276 YGMPIDMWSLGCILAELLT 294
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 88 DFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
DF+ +CL+ +P R T Q + HP+++R LP
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 83 SRDARDFILKCLQVNPNDRPTAAQLMEHPFV 113
+ +A D + K LQ NPN R +A ++HPFV
Sbjct: 302 NEEALDLLDKLLQFNPNKRISANDALKHPFV 332
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 33.1 bits (74), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGE--LPPIPDSVSRDARDFILKCLQ 95
G DIW++GC + + R P+ + A +I G+ +PP D+ I LQ
Sbjct: 231 GEKQDIWALGCILYLLCFRQHPF--EDGAKLRIVNGKYSIPP-HDTQYTVFHSLIRAMLQ 287
Query: 96 VNPNDRPTAAQLM 108
VNP +R + A+++
Sbjct: 288 VNPEERLSIAEVV 300
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 24 SLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDS 81
+L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 204 ALAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSH 260
Query: 82 VSRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 261 FSSDLKDLLRNLLQVDLTKR 280
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 33.1 bits (74), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEW----ALFKIARGELPPIPDSVSRDARDFILKC 93
G D+W++G T+ + P+ + K E P PD ++ D +D I +
Sbjct: 218 GKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPD-IAEDLKDLITRM 276
Query: 94 LQVNPNDRPTAAQLMEHPFVKR 115
L NP R ++ HP+V R
Sbjct: 277 LDKNPESRIVVPEIKLHPWVTR 298
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 33.1 bits (74), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 42 DIWSVGCTVLEMLTRCRPY--FGVEWALFKIARGELPP---IPDSVSRDARDFILKCLQV 96
D+WS C +L ML C P+ F KIA E PP IP S + I + L+
Sbjct: 273 DVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIA-SEPPPVREIPPSCAPLTAQAIQEGLRK 331
Query: 97 NPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
P R +AA+L V R L GL +P
Sbjct: 332 EPIHRVSAAELGGK--VNRALQQVGGLKSP 359
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.1 bits (74), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 42 DIWSVGCTVLEMLTRCRPY--FGVEWALFKIARGELPP---IPDSVSRDARDFILKCLQV 96
D+WS C +L ML C P+ F KIA E PP IP S + I + L+
Sbjct: 254 DVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIA-SEPPPVREIPPSCAPLTAQAIQEGLRK 312
Query: 97 NPNDRPTAAQLMEHPFVKRPLPTSWGLPTP 126
P R +AA+L V R L GL +P
Sbjct: 313 EPIHRVSAAELGGK--VNRALQQVGGLKSP 340
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 41 ADIWSVGCTVL-EMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
ADI+++ TV+ P G +W +I +G LP IP +S++ + + + +P
Sbjct: 212 ADIFALALTVVCAAGAEPLPRNGDQW--HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPE 269
Query: 100 DRPTAAQLMEHPFV 113
RP+A L++H +
Sbjct: 270 RRPSAMALVKHSVL 283
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 41 ADIWSVGCTVL-EMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
ADI+++ TV+ P G +W +I +G LP IP +S++ + + + +P
Sbjct: 210 ADIFALALTVVCAAGAEPLPRNGDQW--HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPE 267
Query: 100 DRPTAAQLMEHPFV 113
RP+A L++H +
Sbjct: 268 RRPSAMALVKHSVL 281
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 41 ADIWSVGCTVL-EMLTRCRPYFGVEWALFKIARGELPPIPDSVSRDARDFILKCLQVNPN 99
ADI+++ TV+ P G +W +I +G LP IP +S++ + + + +P
Sbjct: 210 ADIFALALTVVCAAGAEPLPRNGDQW--HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPE 267
Query: 100 DRPTAAQLMEHPFV 113
RP+A L++H +
Sbjct: 268 RRPSAMALVKHSVL 281
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 39 LPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKI--ARGELPPIP-DSVSRDARDFILKC 93
P D+WSVG +L+ P+ G A L I R +L +S +A++FI K
Sbjct: 267 FPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKL 326
Query: 94 LQVNPNDRPTAAQLMEHP 111
L + R +A++ ++HP
Sbjct: 327 LIKEKSWRISASEALKHP 344
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELPPIPDSVSRDARDFIL 91
++ YG D W +G + EM+ P++ + LF++ E P ++ +A+ +
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 241
Query: 92 KCLQVNPNDR-----PTAAQLMEHPF 112
L+ +P R A ++M+H F
Sbjct: 242 GLLKKDPKQRLGGGSEDAKEIMQHRF 267
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 32.7 bits (73), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 32.7 bits (73), Expect = 0.058, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 81 SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
S+S D + + L+ NPN R T Q ++HP++K
Sbjct: 333 SISDDGINLLESMLKFNPNKRITIDQALDHPYLK 366
Score = 28.9 bits (63), Expect = 0.84, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGE--LP 76
V+RW + ++ +N Y DIWS GC E+L + + F + G P
Sbjct: 213 VTRWYRAPELILLQEN--YTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFP 270
Query: 77 PIPDSVSRDARD 88
PD S+ +
Sbjct: 271 LSPDRNSKKVHE 282
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 32/111 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW--ALFKIAR---------------------- 72
Y + DIWSVGC + E+LT + G + L +I R
Sbjct: 229 YNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYI 288
Query: 73 GELPPIPDSVSRD--------ARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
LP +P D A D + K L ++ + R TA++ + HP+ +
Sbjct: 289 NSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 226 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 282
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 283 SSDLKDLLRNLLQVDLTKR 301
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 35/128 (27%)
Query: 19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEW-----ALFKI-- 70
V+ W D ++ SK Y DIWS+GC EM+T +P F GV +F I
Sbjct: 181 VTLWYRAPDVLMGSKK--YSTSVDIWSIGCIFAEMIT-GKPLFPGVTDDDQLPKIFSILG 237
Query: 71 --------ARGELP----------------PIPDSVSRDARDFILKCLQVNPNDRPTAAQ 106
ELP I ++ D + L +PN R +A
Sbjct: 238 TPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARD 297
Query: 107 LMEHPFVK 114
M HP+ K
Sbjct: 298 AMNHPYFK 305
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 32.7 bits (73), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 32.7 bits (73), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 32.7 bits (73), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELPPIPDSVSRDARDFIL 91
++ YG D W +G + EM+ P++ + LF++ E P ++ +A+ +
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 242
Query: 92 KCLQVNPNDR-----PTAAQLMEHPF 112
L+ +P R A ++M+H F
Sbjct: 243 GLLKKDPKQRLGGGSEDAKEIMQHRF 268
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 32.7 bits (73), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 32.7 bits (73), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 32.7 bits (73), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 32.7 bits (73), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 32.7 bits (73), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 32.7 bits (73), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 32.7 bits (73), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 215 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 273
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 274 TKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 32.7 bits (73), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 212 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 270
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 271 TKRLGCEEMEGYGPLKAHPFFE 292
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 32.7 bits (73), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 212 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 270
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 271 TKRLGCEEMEGYGPLKAHPFFE 292
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 32.7 bits (73), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 216 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 274
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 275 TKRLGCEEMEGYGPLKAHPFFE 296
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 32.7 bits (73), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 215 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 273
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 274 TKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 32.7 bits (73), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELPPIPDSVSRDARDFIL 91
++ YG D W +G + EM+ P++ + LF++ E P ++ +A+ +
Sbjct: 184 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 243
Query: 92 KCLQVNPNDR-----PTAAQLMEHPF 112
L+ +P R A ++M+H F
Sbjct: 244 GLLKKDPKQRLGGGSEDAKEIMQHRF 269
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 32.7 bits (73), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 32.7 bits (73), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 198 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 254
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 255 SSDLKDLLRNLLQVDLTKR 273
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 32.7 bits (73), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 32.7 bits (73), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFGVEW---ALFKIARGELPPIPDSVSRD--ARDFILKCLQ 95
DI+S GC +++ FG A + L + D AR+ I K +
Sbjct: 210 VDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIA 269
Query: 96 VNPNDRPTAAQLMEHPF 112
++P RP+A +++HPF
Sbjct: 270 MDPQKRPSAKHVLKHPF 286
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 32.7 bits (73), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 213 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 271
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 272 TKRLGCEEMEGYGPLKAHPFFE 293
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 32.7 bits (73), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.7 bits (73), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 213 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 271
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 272 TKRLGCEEMEGYGPLKAHPFFE 293
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 32.7 bits (73), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 216 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 274
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 275 TKRLGCEEMEGYGPLKAHPFFE 296
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.7 bits (73), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 32.7 bits (73), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 213 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 271
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 272 TKRLGCEEMEGYGPLKAHPFFE 293
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 32.7 bits (73), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 198 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 254
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 255 SSDLKDLLRNLLQVDLTKR 273
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 32.7 bits (73), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 226 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 282
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 283 SSDLKDLLRNLLQVDLTKR 301
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.7 bits (73), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 215 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 273
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 274 TKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.7 bits (73), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 213 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 271
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 272 TKRLGCEEMEGYGPLKAHPFFE 293
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 32.7 bits (73), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 226 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 282
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 283 SSDLKDLLRNLLQVDLTKR 301
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.7 bits (73), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 32.7 bits (73), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 32.7 bits (73), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 32.7 bits (73), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Query: 12 ALRRKWHVSRWNS-------LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE 64
L R+WH + S + +V+ + G +D+WS G + E+LT P+ G++
Sbjct: 161 GLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKG--SDVWSYGVLLWELLTGEVPFRGID 218
Query: 65 --WALFKIARGELP-PIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEH 110
+ +A +L PIP + + C +P+ RP+ +++
Sbjct: 219 GLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 32.7 bits (73), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.7 bits (73), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 32.7 bits (73), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV--EWALFKIARGEL---PPIPDSVSRDARDFIL 91
Y D+WS G + +L P+ G + L ++ +G+ PP VS +A+ +
Sbjct: 199 YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVK 258
Query: 92 KCLQVNPNDRPTAAQLMEHPFV 113
L P+ R +A + + HP++
Sbjct: 259 LMLTYEPSKRISAEEALNHPWI 280
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 49/130 (37%)
Query: 37 YGLPADIWSVGCTVLEMLT---------------------------------------RC 57
+G ADIWS C + E++T
Sbjct: 212 WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYT 271
Query: 58 RPYFGVEWALFKIARGELPPIPDSVS----------RDARDFILKCLQVNPNDRPTAAQL 107
R +F L I++ + P+ D ++ ++ DF+ LQ++P R A L
Sbjct: 272 RTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 331
Query: 108 MEHPFVKRPL 117
+ HP++K L
Sbjct: 332 VNHPWLKDTL 341
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 215 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 273
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 274 TKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIIISK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 32.7 bits (73), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 49/130 (37%)
Query: 37 YGLPADIWSVGCTVLEMLT---------------------------------------RC 57
+G ADIWS C + E++T
Sbjct: 212 WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYT 271
Query: 58 RPYFGVEWALFKIARGELPPIPDSVS----------RDARDFILKCLQVNPNDRPTAAQL 107
R +F L I++ + P+ D ++ ++ DF+ LQ++P R A L
Sbjct: 272 RTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 331
Query: 108 MEHPFVKRPL 117
+ HP++K L
Sbjct: 332 VNHPWLKDTL 341
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 32.7 bits (73), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 32.7 bits (73), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 48/132 (36%), Gaps = 43/132 (32%)
Query: 19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GV-------------- 63
V+ W D ++ SK Y DIWS+GC EM+T +P F GV
Sbjct: 181 VTLWYRAPDVLMGSKK--YSTSVDIWSIGCIFAEMIT-GKPLFPGVTDDDQLPKIFSILG 237
Query: 64 -----EWALFKIARGELP----------------PIPDSVSRDARDFILKCLQVNPNDRP 102
EW + ELP I ++ D + L +PN R
Sbjct: 238 TPNPREWPQVQ----ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRI 293
Query: 103 TAAQLMEHPFVK 114
+A M HP+ K
Sbjct: 294 SARDAMNHPYFK 305
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 32.7 bits (73), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 190 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 248
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 249 TKRLGCEEMEGYGPLKAHPFFE 270
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKCLQ 95
G D+WS+G + +++ P+ G + + RG+ IP +S D + + + L
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKRFLV 247
Query: 96 VNPNDRPTAAQLME 109
+NP R T Q+M+
Sbjct: 248 LNPIKRGTLEQIMK 261
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 191 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 247
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 248 SSDLKDLLRNLLQVDLTKR 266
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 193 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 251
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 252 TKRLGCEEMEGYGPLKAHPFFE 273
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 32.3 bits (72), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRD 85
+VVN + G+ AD WS G + EMLT P+ G + + I + +L +P +S +
Sbjct: 200 EVVNRQ--GHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKL-GMPQFLSTE 256
Query: 86 ARDFILKCLQVNPNDR 101
A+ + + NP +R
Sbjct: 257 AQSLLRALFKRNPANR 272
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 45/126 (35%), Gaps = 35/126 (27%)
Query: 19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIARGEL 75
V+ W D ++ S + Y D+W VGC EM T RP F VE L I R
Sbjct: 162 VTLWYRPPDILLGSTD--YSTQIDMWGVGCIFYEMAT-GRPLFPGSTVEEQLHFIFRILG 218
Query: 76 PPIPDS-----------------------------VSRDARDFILKCLQVNPNDRPTAAQ 106
P ++ + D D + K LQ +R +A
Sbjct: 219 TPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAED 278
Query: 107 LMEHPF 112
M+HPF
Sbjct: 279 AMKHPF 284
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 31/107 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIAR----------GELPPIPD--- 80
Y D+WS GC E+ RP F V+ L +I R + +PD
Sbjct: 179 YSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238
Query: 81 ---------------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
++ RD + L+ NP R +A + ++HP+
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 197 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 255
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 256 TKRLGCEEMEGYGPLKAHPFFE 277
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 191 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 249
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 250 TKRLGCEEMEGYGPLKAHPFFE 271
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 220 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 278
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 279 TKRLGCEEMEGYGPLKAHPFFE 300
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P+ ARD + K L ++
Sbjct: 192 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 250
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 251 TKRLGCEEMEGYGPLKAHPFFE 272
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 32.3 bits (72), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 32.3 bits (72), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 200 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 256
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 257 SSDLKDLLRNLLQVDLTKR 275
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 32.3 bits (72), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 41 ADIWSVGCTVLEMLT-RCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKCLQVN 97
+D+WS G TV E++T +PY G+ + +GE P P + D ++KC ++
Sbjct: 202 SDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMID 261
Query: 98 PNDRPTAAQLMEH 110
RP +L+
Sbjct: 262 SECRPRFRELVSE 274
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 32.3 bits (72), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 206 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 262
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 263 SSDLKDLLRNLLQVDLTKR 281
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 32.3 bits (72), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 192 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 248
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 249 SSDLKDLLRNLLQVDLTKR 267
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 32.3 bits (72), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRD 85
+VVN + G+ AD WS G + EMLT P+ G + + I + +L +P +S +
Sbjct: 196 EVVNRR--GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL-GMPQFLSPE 252
Query: 86 ARDFILKCLQVNPNDRPTAA 105
A+ + + NP +R A
Sbjct: 253 AQSLLRMLFKRNPANRLGAG 272
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 32.3 bits (72), Expect = 0.080, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELPPIPDSVSRDARDFIL 91
++ YG D W +G + EM+ P++ + LF++ E P ++ +A+ +
Sbjct: 325 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 384
Query: 92 KCLQVNPNDR-----PTAAQLMEHPF 112
L+ +P R A ++M+H F
Sbjct: 385 GLLKKDPKQRLGGGSEDAKEIMQHRF 410
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 32.3 bits (72), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRD 85
+VVN + G+ AD WS G + EMLT P+ G + + I + +L +P +S +
Sbjct: 197 EVVNRR--GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL-GMPQFLSPE 253
Query: 86 ARDFILKCLQVNPNDRPTAA 105
A+ + + NP +R A
Sbjct: 254 AQSLLRMLFKRNPANRLGAG 273
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 32.3 bits (72), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEWALFK--IARGELPPIPDSVSRDARDFILKCLQ 95
G D+WS+G + +++ P+ G + + RG+ IP +S D + + + L
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYMSTDCENLLKRFLV 250
Query: 96 VNPNDRPTAAQLME 109
+NP R T Q+M+
Sbjct: 251 LNPIKRGTLEQIMK 264
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 32.3 bits (72), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 32.3 bits (72), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRD 85
+VVN + G+ AD WS G + EMLT P+ G + + I + +L +P +S +
Sbjct: 196 EVVNRR--GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL-GMPQFLSPE 252
Query: 86 ARDFILKCLQVNPNDRPTAA 105
A+ + + NP +R A
Sbjct: 253 AQSLLRMLFKRNPANRLGAG 272
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSVSRDARDFILKC 93
GY D W++G + EM P+F + KI G++ P S D +D +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNL 272
Query: 94 LQVNPNDR 101
LQV+ R
Sbjct: 273 LQVDLTKR 280
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 32.0 bits (71), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 39/129 (30%)
Query: 19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVE-----WALFKI-- 70
V+ W D ++ S+ Y DIWS GC + EM+T +P F G +F I
Sbjct: 170 VTLWYRAPDVLMGSRT--YSTSIDIWSCGCILAEMIT-GKPLFPGTNDEEQLKLIFDIMG 226
Query: 71 --------ARGELPPIPDSVS----RDAR----------------DFILKCLQVNPNDRP 102
+ +LP ++ RD R DF+ LQ+NP+ R
Sbjct: 227 TPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRL 286
Query: 103 TAAQLMEHP 111
+A Q + HP
Sbjct: 287 SAKQALHHP 295
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPPIPDSVSRDARDFI 90
+ + +D+W+ G + E+ T PY G++ + L K R E P + + +
Sbjct: 435 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP---EGCPEKVYELM 491
Query: 91 LKCLQVNPNDRPTAAQLME 109
C Q NP+DRP+ A++ +
Sbjct: 492 RACWQWNPSDRPSFAEIHQ 510
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E+ +F KI + E P + ARD + K L ++
Sbjct: 218 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPAAFFPKARDLVEKLLVLDA 276
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 277 TKRLGCEEMEGYGPLKAHPFFE 298
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 10/48 (20%)
Query: 67 LFKIARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
L+KI + EL DF+ LQ++P RP+ A+L++H F++
Sbjct: 323 LYKIIKHELFC----------DFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 11/80 (13%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPP-IPDSVSRDARDF 89
+ + +D+W+ G + E+ T PY G++ + L K R E P P+ V +
Sbjct: 393 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV----YEL 448
Query: 90 ILKCLQVNPNDRPTAAQLME 109
+ C Q NP+DRP+ A++ +
Sbjct: 449 MRACWQWNPSDRPSFAEIHQ 468
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPPIPDSVSRDARDFI 90
+ + +D+W+ G + E+ T PY G++ + L K R E P + + +
Sbjct: 396 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP---EGCPEKVYELM 452
Query: 91 LKCLQVNPNDRPTAAQLME 109
C Q NP+DRP+ A++ +
Sbjct: 453 RACWQWNPSDRPSFAEIHQ 471
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 31/107 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---GVEWALFKIAR----------GELPPIPD--- 80
Y D+WS GC E+ RP F V+ L +I R + +PD
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238
Query: 81 ---------------SVSRDARDFILKCLQVNPNDRPTAAQLMEHPF 112
++ RD + L+ NP R +A + ++HP+
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEWALF--KIARGELPPIPDSVSRDARDFILKCLQ 95
G D+WS+G + +++ P+ G ++ RG+ IP S D + + K L
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYXSTDCENLLKKFLI 249
Query: 96 VNPNDRPTAAQL 107
+NP+ R T Q+
Sbjct: 250 LNPSKRGTLEQI 261
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 17/85 (20%)
Query: 41 ADIWSVGCTVLEMLTRCR----------PYFGVEWALFKI-------ARGELPPIPDSVS 83
+D+WS G T+ E+LT C G+ + RGE P PD
Sbjct: 218 SDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCP 277
Query: 84 RDARDFILKCLQVNPNDRPTAAQLM 108
+ + C + + RPT L+
Sbjct: 278 AEVYHLMKNCWETEASFRPTFENLI 302
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEWA---LFKIARGELPPIPDSVSR-DARDFILK 92
Y D+++ G LE T PY + A ++ G P D V+ + ++ I
Sbjct: 206 YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG 265
Query: 93 CLQVNPNDRPTAAQLMEHPFVK 114
C++ N ++R + L+ H F +
Sbjct: 266 CIRQNKDERYSIKDLLNHAFFQ 287
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + EM P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVN 97
S D +D + LQV+
Sbjct: 262 SSDLKDLLRNLLQVD 276
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 8/93 (8%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA------LFKIARGELPPIPDS 81
Q + G YG D WS+G + EML P++ + R + P
Sbjct: 249 QAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTD 308
Query: 82 VSRDARDFI--LKCLQVNPNDRPTAAQLMEHPF 112
VS +A+D I L C + + + +HPF
Sbjct: 309 VSENAKDLIRRLICSREHRLGQNGIEDFKKHPF 341
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPPIPDSVSRDARDFI 90
+ + +D+W+ G + E+ T PY G++ + L K R E P + + +
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP---EGCPEKVYELM 250
Query: 91 LKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 251 RACWQWNPSDRPSFAEI 267
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/79 (18%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGELPP----IPDSVSRDARDF 89
Y +D+++ G + E++T PY + + + + RG L P + + + +
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRL 261
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ +CL+ ++RP+ +++
Sbjct: 262 MAECLKKKRDERPSFPRIL 280
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPPIPDSVSRDARDFI 90
+ + +D+W+ G + E+ T PY G++ + L K R E P + + +
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP---EGCPEKVYELM 250
Query: 91 LKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 251 RACWQWNPSDRPSFAEI 267
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPPIPDSVSRDARDFI 90
+ + +D+W+ G + E+ T PY G++ + L K R E P + + +
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP---EGCPEKVYELM 250
Query: 91 LKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 251 RACWQWNPSDRPSFAEI 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPP-IPDSVSRDARDF 89
+ + +D+W+ G + E+ T PY G++ + L K R E P P+ V R
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR-- 246
Query: 90 ILKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 247 --ACWQWNPSDRPSFAEI 262
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPP-IPDSVSRDARDF 89
+ + +D+W+ G + E+ T PY G++ + L K R E P P+ V R
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR-- 248
Query: 90 ILKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 249 --ACWQWNPSDRPSFAEI 264
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPPIPDSVSRDARDFI 90
+ + +D+W+ G + E+ T PY G++ + L K R E P + + +
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP---EGCPEKVYELM 246
Query: 91 LKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 247 RACWQWNPSDRPSFAEI 263
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/74 (20%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGELPP----IPDSVSRDARDF 89
Y +D+++ G + E++T PY + + + + RG L P + + + +
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRL 261
Query: 90 ILKCLQVNPNDRPT 103
+ +CL+ ++RP+
Sbjct: 262 MAECLKKKRDERPS 275
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPPIPDSVSRDARDFI 90
+ + +D+W+ G + E+ T PY G++ + L K R E P + + +
Sbjct: 193 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP---EGCPEKVYELM 249
Query: 91 LKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 250 RACWQWNPSDRPSFAEI 266
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPPIPDSVSRDARDFI 90
+ + +D+W+ G + E+ T PY G++ + L K R E P + + +
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP---EGCPEKVYELM 247
Query: 91 LKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 248 RACWQWNPSDRPSFAEI 264
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPP-IPDSVSRDARDF 89
+ + +D+W+ G + E+ T PY G++ + L K R E P P+ V +
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV----YEL 249
Query: 90 ILKCLQVNPNDRPTAAQL 107
+ C Q NP+DRP+ A++
Sbjct: 250 MRACWQWNPSDRPSFAEI 267
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 42/127 (33%), Gaps = 49/127 (38%)
Query: 36 GYGLPADIWSVGCTVLEMLT---RCRPYFGVEWAL------------------------- 67
GY PADIWS C E+ T P+ G E+
Sbjct: 253 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKY 312
Query: 68 ---FKIARGELPPI------------------PDSVSRDARDFILKCLQVNPNDRPTAAQ 106
F +G+L I + DF+L L++ P R TAA+
Sbjct: 313 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE 372
Query: 107 LMEHPFV 113
+ HP++
Sbjct: 373 CLRHPWL 379
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGELPPIPDSVSRD 85
+V+N K G D+WS G + ML P F E+ LFK + +PD +S
Sbjct: 177 EVINGKLYA-GPEVDVWSCGIVLYVMLVGRLP-FDDEFIPNLFKKVNSCVYVMPDFLSPG 234
Query: 86 ARDFILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
A+ I + + +P R T ++ P+ LP
Sbjct: 235 AQSLIRRMIVADPMQRITIQEIRRDPWFNVNLP 267
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/79 (18%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGELPP----IPDSVSRDARDF 89
Y +D+++ G + E++T PY + + + + RG L P + + + +
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRL 249
Query: 90 ILKCLQVNPNDRPTAAQLM 108
+ +CL+ ++RP+ +++
Sbjct: 250 MAECLKKKRDERPSFPRIL 268
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 42/127 (33%), Gaps = 49/127 (38%)
Query: 36 GYGLPADIWSVGCTVLEMLT---RCRPYFGVEWAL------------------------- 67
GY PADIWS C E+ T P+ G E+
Sbjct: 269 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKY 328
Query: 68 ---FKIARGELPPI------------------PDSVSRDARDFILKCLQVNPNDRPTAAQ 106
F +G+L I + DF+L L++ P R TAA+
Sbjct: 329 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE 388
Query: 107 LMEHPFV 113
+ HP++
Sbjct: 389 CLRHPWL 395
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPP-IPDSVSRDARDF 89
+ + +D+W+ G + E+ T PY G++ + L K R E P P+ V R
Sbjct: 202 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR-- 259
Query: 90 ILKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 260 --ACWQWNPSDRPSFAEI 275
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPP-IPDSVSRDARDF 89
+ + +D+W+ G + E+ T PY G++ + L K R E P P+ V R
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR-- 246
Query: 90 ILKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 247 --ACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPP-IPDSVSRDARDF 89
+ + +D+W+ G + E+ T PY G++ + L K R E P P+ V +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV----YEL 244
Query: 90 ILKCLQVNPNDRPTAAQL 107
+ C Q NP+DRP+ A++
Sbjct: 245 MRACWQWNPSDRPSFAEI 262
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPPIPDSVSRDARDFI 90
+ + +D+W+ G + E+ T PY G++ + L K R E P + + +
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP---EGCPEKVYELM 250
Query: 91 LKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 251 RACWQWNPSDRPSFAEI 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPP-IPDSVSRDARDF 89
+ + +D+W+ G + E+ T PY G++ + L K R E P P+ V R
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR-- 246
Query: 90 ILKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 247 --ACWQWNPSDRPSFAEI 262
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 16/96 (16%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGE----LPPIPDSVSR---- 84
KN Y D W++GC + EM+ P+ + KI R E + +P+ S
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPF---QQRKKKIKREEVERLVKEVPEEYSERFSP 414
Query: 85 DARDFILKCLQVNPNDR-----PTAAQLMEHPFVKR 115
AR + L +P +R +A ++ EHP K+
Sbjct: 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRC-RPYFGVEWALF--KIARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G + E+++ PY G+ A K+ +G P + + D + +C
Sbjct: 218 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQC 277
Query: 94 LQVNPNDRPTAAQLM 108
+ P +RP+ AQ++
Sbjct: 278 WREKPYERPSFAQIL 292
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPPIPDSVSRDARDFI 90
+ + +D+W+ G + E+ T PY G++ + L K R E P + + +
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP---EGCPEKVYELM 246
Query: 91 LKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 247 RACWQWNPSDRPSFAEI 263
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPY 60
K GY D WS+G T E+L RPY
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPP-IPDSVSRDARDF 89
+ + +D+W+ G + E+ T PY G++ + L K R E P P+ V R
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR-- 246
Query: 90 ILKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 247 --ACWQWNPSDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPP-IPDSVSRDARDF 89
+ + +D+W+ G + E+ T PY G++ + L K R E P P+ V R
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR-- 246
Query: 90 ILKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 247 --ACWQWNPSDRPSFAEI 262
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRC-RPYFGVEWALF--KIARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G + E+++ PY G+ A K+ +G P + + D + +C
Sbjct: 215 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQC 274
Query: 94 LQVNPNDRPTAAQLM 108
+ P +RP+ AQ++
Sbjct: 275 WREKPYERPSFAQIL 289
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVEWA-----LFKIARGELPP-IPDSVSRDARDF 89
+ + +D+W+ G + E+ T PY G++ + L K R E P P+ V R
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR-- 248
Query: 90 ILKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 249 --ACWQWNPSDRPSFAEI 264
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 34/93 (36%), Gaps = 17/93 (18%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCR----------PYFGVEWALFKI-------ARGEL 75
K + +D+WS G T+ E+LT C G+ + RGE
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER 252
Query: 76 PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLM 108
P PD + + C + + RPT L+
Sbjct: 253 LPRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 34/93 (36%), Gaps = 17/93 (18%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCR----------PYFGVEWALFKI-------ARGEL 75
K + +D+WS G T+ E+LT C G+ + RGE
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER 252
Query: 76 PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLM 108
P PD + + C + + RPT L+
Sbjct: 253 LPRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRC-RPYFGVEWALF--KIARGELPPIPDSVSRDARDFILKC 93
Y +D+WS G + E+++ PY G+ A K+ +G P + + D + +C
Sbjct: 208 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQC 267
Query: 94 LQVNPNDRPTAAQLM 108
+ P +RP+ AQ++
Sbjct: 268 WREKPYERPSFAQIL 282
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 32/111 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW----------------ALFKIARGE------ 74
Y D+WSVGC EML R + + G + A+ + E
Sbjct: 240 YTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYI 299
Query: 75 --LPP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
LPP + R A + + L+ P+ R +AA + HPF+ +
Sbjct: 300 QSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 25 LTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVE--WALFKIARGELPPIPDSV 82
L +++ SK GY D W++G + +M P+F + KI G++ P
Sbjct: 205 LAPEIILSK--GYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHF 261
Query: 83 SRDARDFILKCLQVNPNDR 101
S D +D + LQV+ R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 32/111 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW----------------ALFKIARGE------ 74
Y D+WSVGC EML R + + G + A+ + E
Sbjct: 241 YTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYI 300
Query: 75 --LPP--------IPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVKR 115
LPP + R A + + L+ P+ R +AA + HPF+ +
Sbjct: 301 QSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 351
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 16/96 (16%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGE----LPPIPDSVSR---- 84
KN Y D W++GC + EM+ P+ + KI R E + +P+ S
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPF---QQRKKKIKREEVERLVKEVPEEYSERFSP 414
Query: 85 DARDFILKCLQVNPNDR-----PTAAQLMEHPFVKR 115
AR + L +P +R +A ++ EHP K+
Sbjct: 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 43/121 (35%)
Query: 36 GYGLPADIWSVGCTVLEMLTRCRPYFGV----EW-------------------------- 65
GY DIWSVGC + E++ + G +W
Sbjct: 199 GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYV 258
Query: 66 ----ALFKIARGELPP---IPDSVSRD------ARDFILKCLQVNPNDRPTAAQLMEHPF 112
A IA EL P P RD ARD + K L ++P+ R + + + HP+
Sbjct: 259 ENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPY 318
Query: 113 V 113
+
Sbjct: 319 I 319
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 41 ADIWSVGCTVLEMLTRCRPYF---GVEWALFKIARGELPPIPDSVSRDARDFILKCLQVN 97
AD+WS + E++TR P+ +E + G P IP +S + C+ +
Sbjct: 192 ADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNED 251
Query: 98 PNDRP 102
P RP
Sbjct: 252 PAKRP 256
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEW-ALFKIARGELPPIPDSVSRDARDFILKCLQV 96
G DIWS G + +L P+ LFK + P ++ + LQV
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQV 253
Query: 97 NPNDRPTAAQLMEHPFVKRPLP 118
+P R T + EH + K+ LP
Sbjct: 254 DPMKRATIKDIREHEWFKQDLP 275
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Query: 34 NGGYGLPADIWSVGCTVLEMLTRCRPYF-----GVEWALFKIARGELPPIPDSVSRDARD 88
+G YG D WSVG + EML P++ G + P +S+ A++
Sbjct: 253 DGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKN 312
Query: 89 FILKCLQVNPN--DRPTAAQLMEHPFVK 114
I L R ++ +HPF K
Sbjct: 313 LICAFLTDREVRLGRNGVEEIKQHPFFK 340
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 30.8 bits (68), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 45/122 (36%)
Query: 36 GYGLPADIWSVGCTVLEML--------------------------------TRCRPYFG- 62
G+ P D+WS+GC ++E TR R YF
Sbjct: 210 GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHH 269
Query: 63 --VEW-----ALFKIARGELPPIPDSVSRDAR-----DFILKCLQVNPNDRPTAAQLMEH 110
++W A ++R P +S+D D I K L+ +P R T + ++H
Sbjct: 270 DRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329
Query: 111 PF 112
PF
Sbjct: 330 PF 331
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 30.8 bits (68), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 45/122 (36%)
Query: 36 GYGLPADIWSVGCTVLEML--------------------------------TRCRPYFG- 62
G+ P D+WS+GC ++E TR R YF
Sbjct: 210 GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHH 269
Query: 63 --VEW-----ALFKIARGELPPIPDSVSRDAR-----DFILKCLQVNPNDRPTAAQLMEH 110
++W A ++R P +S+D D I K L+ +P R T + ++H
Sbjct: 270 DRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329
Query: 111 PF 112
PF
Sbjct: 330 PF 331
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E +F KI + E P+ ARD + K L ++
Sbjct: 215 SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 273
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 274 TKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 35 GGYGLPADIWSVGCTVLEMLT 55
GY PADIWS C E+ T
Sbjct: 260 AGYSTPADIWSTACMAFELAT 280
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 34/128 (26%)
Query: 19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEW-----ALFKI--- 70
V+RW + ++N Y DIWSVGC + EM+T + G + + K+
Sbjct: 187 VTRWYRAPEVILNWMR--YTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGT 244
Query: 71 -------------ARGELPPIPDSVSRD-----------ARDFILKCLQVNPNDRPTAAQ 106
A+ + +P+ +D A + + K L ++ R TA +
Sbjct: 245 PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGE 304
Query: 107 LMEHPFVK 114
+ HP+ +
Sbjct: 305 ALAHPYFE 312
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 17 WHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLT 55
+ +RW + ++N+ + Y DIWSVGC + E+LT
Sbjct: 182 YVATRWYRAPEIMLNAMH--YNQTVDIWSVGCIMAELLT 218
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/82 (19%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 34 NGGYGLPADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARG----ELPPIPDSVSRDA 86
N + +D++S G + E++T PY + + +F + RG +L + + +
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAM 270
Query: 87 RDFILKCLQVNPNDRPTAAQLM 108
+ + C++ +RP Q++
Sbjct: 271 KRLVADCVKKVKEERPLFPQIL 292
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---------GVEWALFKIARGELP-PIPDSVSRDA 86
Y D+WS+G + +L P++ G++ + ++ + E P P VS +
Sbjct: 210 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSEEV 268
Query: 87 RDFILKCLQVNPNDRPTAAQLMEHPFV 113
+ I L+ P R T + M HP++
Sbjct: 269 KMLIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 41 ADIWSVGCTVLEMLTRCRPY-FGVEWALF-KIARGELPPIPDSVSRDARDFILKCLQVNP 98
+D+W++GC + +++ P+ G E +F KI + E P+ ARD + K L ++
Sbjct: 215 SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY-DFPEKFFPKARDLVEKLLVLDA 273
Query: 99 NDRPTAAQ------LMEHPFVK 114
R + L HPF +
Sbjct: 274 TKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---------GVEWALFKIARGELP-PIPDSVSRDA 86
Y D+WS+G + +L P++ G++ + ++ + E P P VS +
Sbjct: 202 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSEEV 260
Query: 87 RDFILKCLQVNPNDRPTAAQLMEHPFV 113
+ I L+ P R T + M HP++
Sbjct: 261 KMLIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 12 ALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF--K 69
+LRR+ + L +++ K + D+W G E L P+ +
Sbjct: 166 SLRRRXMCGTLDYLPPEMIEGKT--HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR 223
Query: 70 IARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
I +L P +S ++D I K L+ +P R +MEHP+VK
Sbjct: 224 IVNVDLK-FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---------GVEWALFKIARGELP-PIPDSVSRDA 86
Y D+WS+G + +L P++ G++ + ++ + E P P VS +
Sbjct: 194 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSEEV 252
Query: 87 RDFILKCLQVNPNDRPTAAQLMEHPFV 113
+ I L+ P R T + M HP++
Sbjct: 253 KMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---------GVEWALFKIARGELP-PIPDSVSRDA 86
Y D+WS+G + +L P++ G++ + ++ + E P P VS +
Sbjct: 175 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSEEV 233
Query: 87 RDFILKCLQVNPNDRPTAAQLMEHPFV 113
+ I L+ P R T + M HP++
Sbjct: 234 KMLIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 12 ALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF--K 69
+LRR+ + L +++ K + D+W G E L P+ +
Sbjct: 167 SLRRRXMCGTLDYLPPEMIEGKT--HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR 224
Query: 70 IARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
I +L P +S ++D I K L+ +P R +MEHP+VK
Sbjct: 225 IVNVDLK-FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 268
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---------GVEWALFKIARGELP-PIPDSVSRDA 86
Y D+WS+G + +L P++ G++ + ++ + E P P VS +
Sbjct: 200 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSEEV 258
Query: 87 RDFILKCLQVNPNDRPTAAQLMEHPFV 113
+ I L+ P R T + M HP++
Sbjct: 259 KMLIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 12 ALRRKWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALF--K 69
+LRR+ + L +++ K + D+W G E L P+ +
Sbjct: 166 SLRRRXMCGTLDYLPPEMIEGKT--HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR 223
Query: 70 IARGELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
I +L P +S ++D I K L+ +P R +MEHP+VK
Sbjct: 224 IVNVDLK-FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---------GVEWALFKIARGELP-PIPDSVSRDA 86
Y D+WS+G + +L P++ G++ + ++ + E P P VS +
Sbjct: 201 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSEEV 259
Query: 87 RDFILKCLQVNPNDRPTAAQLMEHPFV 113
+ I L+ P R T + M HP++
Sbjct: 260 KMLIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---------GVEWALFKIARGELP-PIPDSVSRDA 86
Y D+WS+G + +L P++ G++ + ++ + E P P VS +
Sbjct: 195 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSEEV 253
Query: 87 RDFILKCLQVNPNDRPTAAQLMEHPFV 113
+ I L+ P R T + M HP++
Sbjct: 254 KMLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---------GVEWALFKIARGELP-PIPDSVSRDA 86
Y D+WS+G + +L P++ G++ + ++ + E P P VS +
Sbjct: 196 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSEEV 254
Query: 87 RDFILKCLQVNPNDRPTAAQLMEHPFV 113
+ I L+ P R T + M HP++
Sbjct: 255 KMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---------GVEWALFKIARGELP-PIPDSVSRDA 86
Y D+WS+G + +L P++ G++ + ++ + E P P VS +
Sbjct: 194 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSEEV 252
Query: 87 RDFILKCLQVNPNDRPTAAQLMEHPFV 113
+ I L+ P R T + M HP++
Sbjct: 253 KMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---------GVEWALFKIARGELP-PIPDSVSRDA 86
Y D+WS+G + +L P++ G++ + ++ + E P P VS +
Sbjct: 246 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSEEV 304
Query: 87 RDFILKCLQVNPNDRPTAAQLMEHPFV 113
+ I L+ P R T + M HP++
Sbjct: 305 KMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---------GVEWALFKIARGELP-PIPDSVSRDA 86
Y D+WS+G + +L P++ G++ + ++ + E P P VS +
Sbjct: 196 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSEEV 254
Query: 87 RDFILKCLQVNPNDRPTAAQLMEHPFV 113
+ I L+ P R T + M HP++
Sbjct: 255 KMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYF---------GVEWALFKIARGELP-PIPDSVSRDA 86
Y D+WS+G + +L P++ G++ + ++ + E P P VS +
Sbjct: 240 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI-RMGQYEFPNPEWSEVSEEV 298
Query: 87 RDFILKCLQVNPNDRPTAAQLMEHPFV 113
+ I L+ P R T + M HP++
Sbjct: 299 KMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 32/111 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW-----------------ALFKIAR------- 72
Y DIWSVGC + E+L + G ++ L KI+
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 265
Query: 73 GELPPIPD----SVSRDAR----DFILKCLQVNPNDRPTAAQLMEHPFVKR 115
LPP+P S+ R A D + + L ++ + R +AA+ + H + +
Sbjct: 266 QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 17/90 (18%)
Query: 37 YGLPADIWSVGCTVLEMLTRCR--------------PYFG---VEWALFKIARGELPPIP 79
+ + +D+WS G T+ E+LT C P G V + + G+ P P
Sbjct: 194 FYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCP 253
Query: 80 DSVSRDARDFILKCLQVNPNDRPTAAQLME 109
+ + + KC + P++R + L+E
Sbjct: 254 PNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 283
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 16/94 (17%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV----------EWALFKIARGELPPIPDSVSRDA 86
YG D W++G + EM+ P+ V E LF++ + IP S+S A
Sbjct: 230 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA 289
Query: 87 RDFILKCLQVNPNDR------PTAAQLMEHPFVK 114
+ L +P +R A + HPF +
Sbjct: 290 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 17/90 (18%)
Query: 37 YGLPADIWSVGCTVLEMLTRCR--------------PYFG---VEWALFKIARGELPPIP 79
+ + +D+WS G T+ E+LT C P G V + + G+ P P
Sbjct: 206 FYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCP 265
Query: 80 DSVSRDARDFILKCLQVNPNDRPTAAQLME 109
+ + + KC + P++R + L+E
Sbjct: 266 PNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 16/94 (17%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV----------EWALFKIARGELPPIPDSVSRDA 86
YG D W++G + EM+ P+ V E LF++ + IP S+S A
Sbjct: 183 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA 242
Query: 87 RDFILKCLQVNPNDR------PTAAQLMEHPFVK 114
+ L +P +R A + HPF +
Sbjct: 243 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 276
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 32/111 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW-----------------ALFKIAR------- 72
Y DIWSVGC + E+L + G ++ L KI+
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 265
Query: 73 GELPPIPD----SVSRDAR----DFILKCLQVNPNDRPTAAQLMEHPFVKR 115
LPP+P S+ R A D + + L ++ + R +AA+ + H + +
Sbjct: 266 QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 30.0 bits (66), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 16/94 (17%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV----------EWALFKIARGELPPIPDSVSRDA 86
YG D W++G + EM+ P+ V E LF++ + IP S+S A
Sbjct: 187 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA 246
Query: 87 RDFILKCLQVNPNDR------PTAAQLMEHPFVK 114
+ L +P +R A + HPF +
Sbjct: 247 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 30.0 bits (66), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVE-----WALFKIARGELPP-IPDSVSRDARDF 89
+ + +D+W+ G + E+ T PY G++ L K R E P P+ V +
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKV----YEL 242
Query: 90 ILKCLQVNPNDRPTAAQL 107
+ C Q NP+DRP+ A++
Sbjct: 243 MRACWQWNPSDRPSFAEI 260
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 30.0 bits (66), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 16/94 (17%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV----------EWALFKIARGELPPIPDSVSRDA 86
YG D W++G + EM+ P+ V E LF++ + IP S+S A
Sbjct: 198 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKA 257
Query: 87 RDFILKCLQVNPNDR------PTAAQLMEHPFVK 114
+ L +P +R A + HPF +
Sbjct: 258 ASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFR 291
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 30.0 bits (66), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVE-----WALFKIARGELPPIPDSVSRDARDFI 90
+ + +D+W+ G + E+ T PY G++ L K R E P + + +
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERP---EGCPEKVYELM 243
Query: 91 LKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 244 RACWQWNPSDRPSFAEI 260
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 30.0 bits (66), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Query: 37 YGLPADIWSVGCTVLEMLTR-CRPYFGVE-----WALFKIARGELPP-IPDSVSRDARDF 89
+ + +D+W+ G + E+ T PY G++ L K R E P P+ V R
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMR-- 244
Query: 90 ILKCLQVNPNDRPTAAQL 107
C Q NP+DRP+ A++
Sbjct: 245 --ACWQWNPSDRPSFAEI 260
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 30.0 bits (66), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 43/125 (34%), Gaps = 45/125 (36%)
Query: 36 GYGLPADIWSVGCTVLEML--------------------------------TRCRPYF-- 61
G+ P D+WS+GC + E TR + YF
Sbjct: 229 GWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYR 288
Query: 62 -GVEW----ALFKIARGELPPIPDSVSRDAR------DFILKCLQVNPNDRPTAAQLMEH 110
++W + + R P+ ++ +A D I L+ P R T + ++H
Sbjct: 289 GRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQH 348
Query: 111 PFVKR 115
PF R
Sbjct: 349 PFFAR 353
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 32/111 (28%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGVEW-----------------ALFKIAR------- 72
Y DIWSVGC + E+L + G ++ L KI+
Sbjct: 198 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 257
Query: 73 GELPPIPD----SVSRDAR----DFILKCLQVNPNDRPTAAQLMEHPFVKR 115
LPP+P S+ R A D + + L ++ + R +AA+ + H + +
Sbjct: 258 QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 29.6 bits (65), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA------LFKIARGELPPIPDS 81
Q + G YG D WS+G + EML P++ + R + P
Sbjct: 265 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTD 324
Query: 82 VSRDARDFILKCL 94
VS +A+D I + +
Sbjct: 325 VSEEAKDLIQRLI 337
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 29.6 bits (65), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 37 YGLPADIWSVGCTVLEMLTRC-RPYFGV---EWALFKIARGELPPIPDSVSRDARDFILK 92
Y +D+WS G + E+ + PY GV E ++ G P+ + + +L
Sbjct: 278 YSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLD 337
Query: 93 CLQVNPNDRPTAAQLME 109
C +P +RP A+L+E
Sbjct: 338 CWHRDPKERPRFAELVE 354
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 29.6 bits (65), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Query: 28 QVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWA------LFKIARGELPPIPDS 81
Q + G YG D WS+G + EML P++ + R + P
Sbjct: 249 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTD 308
Query: 82 VSRDARDFILKCL 94
VS +A+D I + +
Sbjct: 309 VSEEAKDLIQRLI 321
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 37/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEW-----ALFK 69
++ +RW + ++ S Y D+WS GC + E+ R RP F G ++ +F
Sbjct: 181 EYVATRWYRAPEVMLTS--AKYSRAMDVWSCGCILAELFLR-RPIFPGRDYRHQLLLIFG 237
Query: 70 I-----------------ARGELPPIP-----------DSVSRDARDFILKCLQVNPNDR 101
I AR + +P V+ D + + L +P R
Sbjct: 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKR 297
Query: 102 PTAAQLMEHPFVK 114
TA + +EHP+++
Sbjct: 298 ITAKEALEHPYLQ 310
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIA-------- 71
SR+ + + + N Y DIWS GC + E++ + +P F E + ++
Sbjct: 204 SRYYRAPELIFGATN--YTTNIDIWSTGCVMAELM-QGQPLFPGESGIDQLVEIIKVLGT 260
Query: 72 --------------RGELPPI-PDSVSR--------DARDFILKCLQVNPNDRPTAAQLM 108
+ P I P S+ DA D I + L+ P+ R TA + +
Sbjct: 261 PSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEAL 320
Query: 109 EHPF 112
HPF
Sbjct: 321 CHPF 324
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 206 YNQTVDIWSVGCIMAELLT 224
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 41 ADIWSVGCTVLEMLTR-CRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVN 97
+D+W G + E+L +P+ GV+ + +I GE P+P + + KC +
Sbjct: 198 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 257
Query: 98 PNDRPTAAQL 107
P+ RP +L
Sbjct: 258 PSRRPRFTEL 267
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 41 ADIWSVGCTVLEMLTR-CRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVN 97
+D+W G + E+L +P+ GV+ + +I GE P+P + + KC +
Sbjct: 221 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 280
Query: 98 PNDRPTAAQL 107
P+ RP +L
Sbjct: 281 PSRRPRFTEL 290
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 206 YNQTVDIWSVGCIMAELLT 224
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 205 YNQTVDIWSVGCIMAELLT 223
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 41 ADIWSVGCTVLEMLTR-CRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVN 97
+D+W G + E+L +P+ GV+ + +I GE P+P + + KC +
Sbjct: 196 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 255
Query: 98 PNDRPTAAQL 107
P+ RP +L
Sbjct: 256 PSRRPRFTEL 265
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 210 YNQTVDIWSVGCIMAELLT 228
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 205 YNQTVDIWSVGCIMAELLT 223
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 206 YNQTVDIWSVGCIMAELLT 224
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 29.3 bits (64), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 29.3 bits (64), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 223 YNQTVDIWSVGCIMAELLT 241
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 211 YNQTVDIWSVGCIMAELLT 229
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 41 ADIWSVGCTVLEMLTR-CRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVN 97
+D+W G + E+L +P+ GV+ + +I GE P+P + + KC +
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 252
Query: 98 PNDRPTAAQL 107
P+ RP +L
Sbjct: 253 PSRRPRFTEL 262
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 207 YNQTVDIWSVGCIMAELLT 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 205 YNQTVDIWSVGCIMAELLT 223
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 202 YNQTVDIWSVGCIMAELLT 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 202 YNQTVDIWSVGCIMAELLT 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 29.3 bits (64), Expect = 0.70, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGE--LP 76
V+RW + ++ +N Y DIWS GC E+L + + F + G P
Sbjct: 218 VTRWYRAPELILLQEN--YTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFP 275
Query: 77 PIPDSVSRDARD 88
PD S+ +
Sbjct: 276 LSPDHNSKKVHE 287
Score = 26.2 bits (56), Expect = 5.4, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 81 SVSRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
S+S++ D + L+ N R T + + HP++K
Sbjct: 338 SISKEGIDLLESMLRFNAQKRITIDKALSHPYLK 371
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 199 YNQTVDIWSVGCIMAELLT 217
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 207 YNQTVDIWSVGCIMAELLT 225
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 207 YNQTVDIWSVGCIMAELLT 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 206 YNQTVDIWSVGCIMAELLT 224
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 220 YNQTVDIWSVGCIMAELLT 238
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 202 YNQTVDIWSVGCIMAELLT 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 29.3 bits (64), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 212 YNQTVDIWSVGCIMAELLT 230
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 29.3 bits (64), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 211 YNQTVDIWSVGCIMAELLT 229
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.3 bits (64), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.3 bits (64), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 29.3 bits (64), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 41 ADIWSVGCTVLEMLTR-CRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVN 97
+D+W G + E+L +P+ GV+ + +I GE P+P + + KC +
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 252
Query: 98 PNDRPTAAQL 107
P+ RP +L
Sbjct: 253 PSRRPRFTEL 262
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 29.3 bits (64), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 207 YNQTVDIWSVGCIMAELLT 225
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 29.3 bits (64), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 212 YNQTVDIWSVGCIMAELLT 230
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 29.3 bits (64), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 205 YNQTVDIWSVGCIMAELLT 223
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 29.3 bits (64), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 29.3 bits (64), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 212 YNQTVDIWSVGCIMAELLT 230
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 29.3 bits (64), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 41 ADIWSVGCTVLEMLTR-CRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVN 97
+D+W G + E+L +P+ GV+ + +I GE P+P + + KC +
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 252
Query: 98 PNDRPTAAQL 107
P+ RP +L
Sbjct: 253 PSRRPRFTEL 262
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 29.3 bits (64), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 196 YNQTVDIWSVGCIMAELLT 214
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 29.3 bits (64), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 219 YNQTVDIWSVGCIMAELLT 237
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 29.3 bits (64), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 29.3 bits (64), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 202 YNQTVDIWSVGCIMAELLT 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 220 YNQTVDIWSVGCIMAELLT 238
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 197 YNQTVDIWSVGCIMAELLT 215
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 37 YGLPADIWSVGCTVLEMLTR 56
YG P D+W GC + EM TR
Sbjct: 207 YGPPIDLWGAGCIMAEMWTR 226
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 220 YNQTVDIWSVGCIMAELLT 238
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 196 YNQTVDIWSVGCIMAELLT 214
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 41 ADIWSVGCTVLEMLTR-CRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVN 97
+D+W G + E+L +P+ GV+ + +I GE P+P + + KC +
Sbjct: 195 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 254
Query: 98 PNDRPTAAQL 107
P+ RP +L
Sbjct: 255 PSRRPRFTEL 264
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 196 YNQTVDIWSVGCIMAELLT 214
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 219 YNQTVDIWSVGCIMAELLT 237
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 29.3 bits (64), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 197 YNQTVDIWSVGCIMAELLT 215
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 29.3 bits (64), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 41 ADIWSVGCTVLEMLTR-CRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVN 97
+D+W G + E+L +P+ GV+ + +I GE P+P + + KC +
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 252
Query: 98 PNDRPTAAQL 107
P+ RP +L
Sbjct: 253 PSRRPRFTEL 262
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 196 YNQTVDIWSVGCIMAELLT 214
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 223 YNQTVDIWSVGCIMAELLT 241
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 41 ADIWSVGCTVLEMLTR-CRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVN 97
+D+W G + E+L +P+ GV+ + +I GE P+P + + KC +
Sbjct: 190 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 249
Query: 98 PNDRPTAAQL 107
P+ RP +L
Sbjct: 250 PSRRPRFTEL 259
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 28.9 bits (63), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y DIWSVGC + E+LT
Sbjct: 198 YNQTVDIWSVGCIMAELLT 216
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 37 YGLPADIWSVGCTVLEMLTR 56
YG P D+W GC + EM TR
Sbjct: 207 YGPPIDLWGAGCIMAEMWTR 226
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 28.9 bits (63), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 37 YGLPADIWSVGCTVLEMLTR 56
YG P D+W GC + EM TR
Sbjct: 206 YGPPIDLWGAGCIMAEMWTR 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 28.9 bits (63), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 37 YGLPADIWSVGCTVLEMLTR 56
YG P D+W GC + EM TR
Sbjct: 207 YGPPIDLWGAGCIMAEMWTR 226
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 28.9 bits (63), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 37/133 (27%)
Query: 16 KWHVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEW-----ALFK 69
++ +RW + ++ S Y D+WS GC + E+ R RP F G ++ +F
Sbjct: 181 EFVATRWYRAPEVMLTS--AKYSRAMDVWSCGCILAELFLR-RPIFPGRDYRHQLLLIFG 237
Query: 70 I-----------------ARGELPPIP-----------DSVSRDARDFILKCLQVNPNDR 101
I AR + +P V+ D + + L +P R
Sbjct: 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKR 297
Query: 102 PTAAQLMEHPFVK 114
TA + +EHP+++
Sbjct: 298 ITAKEALEHPYLQ 310
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 28.9 bits (63), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 37/129 (28%)
Query: 20 SRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYF-GVEW-----ALFKI--- 70
+RW + ++ S Y D+WS GC + E+ R RP F G ++ +F I
Sbjct: 185 TRWYRAPEVMLTS--AKYSRAMDVWSCGCILAELFLR-RPIFPGRDYRHQLLLIFGIIGT 241
Query: 71 --------------ARGELPPIP-----------DSVSRDARDFILKCLQVNPNDRPTAA 105
AR + +P V+ D + + L +P R TA
Sbjct: 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAK 301
Query: 106 QLMEHPFVK 114
+ +EHP+++
Sbjct: 302 EALEHPYLQ 310
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 28.9 bits (63), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 41 ADIWSVGCTVLEMLTR-CRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVN 97
+D+W G + E+L +P+ GV+ + +I GE P+P + + KC +
Sbjct: 573 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 632
Query: 98 PNDRPTAAQL 107
P+ RP +L
Sbjct: 633 PSRRPRFTEL 642
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 41 ADIWSVGCTVLEMLTR-CRPYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVN 97
+D+W G + E+L +P+ GV+ + +I GE P+P + + KC +
Sbjct: 573 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 632
Query: 98 PNDRPTAAQL 107
P+ RP +L
Sbjct: 633 PSRRPRFTEL 642
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFG----VEWALFKIARGELPPIPDSVSRDARDFILKCLQV 96
+D+WS G + E+LTR P + + F +A+G P P+ + +C +
Sbjct: 209 SDVWSFGVLLWELLTRGAPPYRHIDPFDLTHF-LAQGRRLPQPEYCPDSLYQVMQQCWEA 267
Query: 97 NPNDRPT 103
+P RPT
Sbjct: 268 DPAVRPT 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 25 LTDQVVNSKNGG--YGLPADIWSVGCTVLEMLTRCRPYFG 62
++ +V+ S+ G YG D WSVG + EML P++
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 280
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 46/135 (34%), Gaps = 45/135 (33%)
Query: 36 GYGLPADIWSVGCTVLEML--------------------------------TRCRPYF-- 61
G+ P D+WS+GC + E TR + YF
Sbjct: 247 GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYK 306
Query: 62 -GVEW----ALFKIARGELPPIPDSVSRDAR------DFILKCLQVNPNDRPTAAQLMEH 110
G+ W + + + P+ + +D+ D + + L+ +P R T A+ + H
Sbjct: 307 GGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH 366
Query: 111 PFVKRPLPTSWGLPT 125
PF P T
Sbjct: 367 PFFAGLTPEERSFHT 381
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 25 LTDQVVNSKNGG--YGLPADIWSVGCTVLEMLTRCRPYFG 62
++ +V+ S+ G YG D WSVG + EML P++
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 280
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 25 LTDQVVNSKNGG--YGLPADIWSVGCTVLEMLTRCRPYFG 62
++ +V+ S+ G YG D WSVG + EML P++
Sbjct: 236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 19 VSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPP 77
V+RW + ++ +N Y D+WS+GC E+L + E + RG L P
Sbjct: 245 VTRWYRAPELILLQEN--YTEAIDVWSIGCIFAELLNMIK-----ENVAYHADRGPLFP 296
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 83 SRDARDFILKCLQVNPNDRPTAAQLMEHPFVK 114
S DA + + L NPN R T + + HPF K
Sbjct: 370 SADAIHLLKRMLVFNPNKRITINECLAHPFFK 401
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 34 NGGYGLPADIWSVGCTVLEML 54
N Y DIWSVGC EM+
Sbjct: 206 NQHYTTAVDIWSVGCIFAEMM 226
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
Score = 25.4 bits (54), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 86 ARDFILKCLQVNPNDRPTAAQLMEHPFV 113
ARD + K L ++ + R + + ++HP++
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 46/135 (34%), Gaps = 45/135 (33%)
Query: 36 GYGLPADIWSVGCTVLEML--------------------------------TRCRPYF-- 61
G+ P D+WS+GC + E TR + YF
Sbjct: 215 GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYK 274
Query: 62 -GVEW----ALFKIARGELPPIPDSVSRDAR------DFILKCLQVNPNDRPTAAQLMEH 110
G+ W + + + P+ + +D+ D + + L+ +P R T A+ + H
Sbjct: 275 GGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH 334
Query: 111 PFVKRPLPTSWGLPT 125
PF P T
Sbjct: 335 PFFAGLTPEERSFHT 349
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 34/93 (36%), Gaps = 17/93 (18%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-----------------RPYFGVEWALFKIARGEL 75
K + +D+WS G T+ E+LT C + V + RGE
Sbjct: 187 KECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGER 246
Query: 76 PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLM 108
P PD + + C + + RPT L+
Sbjct: 247 LPRPDRCPCEIYHLMKNCWETEASFRPTFQNLV 279
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y L D+WS+GC ++EM T
Sbjct: 235 YDLAIDMWSLGCILVEMHT 253
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 86 ARDFILKCLQVNPNDRPTAAQLMEHPFV 113
ARD + K L ++ + R + + ++HP++
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y L D+WS+GC ++EM T
Sbjct: 216 YDLAIDMWSLGCILVEMHT 234
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 37 YGLPADIWSVGCTVLEMLT 55
Y L D+WS+GC ++EM T
Sbjct: 235 YDLAIDMWSLGCILVEMHT 253
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
Score = 25.4 bits (54), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 86 ARDFILKCLQVNPNDRPTAAQLMEHPFV 113
ARD + K L ++ + R + + ++HP++
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 34/93 (36%), Gaps = 17/93 (18%)
Query: 33 KNGGYGLPADIWSVGCTVLEMLTRC-----------------RPYFGVEWALFKIARGEL 75
K + +D+WS G T+ E+LT C + V + RGE
Sbjct: 188 KECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGER 247
Query: 76 PPIPDSVSRDARDFILKCLQVNPNDRPTAAQLM 108
P PD + + C + + RPT L+
Sbjct: 248 LPRPDRCPCEIYHLMKNCWETEASFRPTFQNLV 280
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 24/102 (23%)
Query: 23 NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRP----------YFGVEWALFKIAR 72
SL+D + + ++ D+WS G + E+ T C G E + ++R
Sbjct: 200 ESLSDNIFSRQS-------DVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR 252
Query: 73 -------GELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQL 107
G+ P P + + + + C +P DRP+ + L
Sbjct: 253 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 86 ARDFILKCLQVNPNDRPTAAQLMEHPFV 113
ARD + K L ++ + R + + ++HP++
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 203 GYKENVDIWSVGCIMGEMI 221
Score = 25.8 bits (55), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPP 77
H+ +WN + +Q+ G P + + TV + Y G ++ K+ L P
Sbjct: 232 HIDQWNKVIEQL------GTPCPEFMKKLQPTVRTYVENRPKYAG--YSFEKLFPDVLFP 283
Query: 78 IPDSVSR----DARDFILKCLQVNPNDRPTAAQLMEHPFV 113
++ ARD + K L ++ + R + + ++HP++
Sbjct: 284 ADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 323
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
Score = 25.4 bits (54), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 83 SRDARDFILKCLQVNPNDRPTAAQLMEHPFV 113
+ ARD + K L ++ + R + + ++HP++
Sbjct: 291 ASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPP 77
H+ +WN + +Q+ G P + + TV + Y G ++ K+ L P
Sbjct: 230 HIDQWNKVIEQL------GTPCPEFMKKLQPTVRTYVENRPKYAG--YSFEKLFPDVLFP 281
Query: 78 IPDSVSR----DARDFILKCLQVNPNDRPTAAQLMEHPFV 113
++ ARD + K L ++ + R + + ++HP++
Sbjct: 282 ADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 202 GYKENVDIWSVGCIMGEMI 220
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPP 77
H+ +WN + +Q+ G P + + TV + Y G ++ K+ L P
Sbjct: 231 HIDQWNKVIEQL------GTPCPEFMKKLQPTVRTYVENRPKYAG--YSFEKLFPDVLFP 282
Query: 78 IPDSVSR----DARDFILKCLQVNPNDRPTAAQLMEHPFV 113
++ ARD + K L ++ + R + + ++HP++
Sbjct: 283 ADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRCR-PY--FGVEWALFKIARGELPPIPDSVSRDARDFILKC 93
Y +D+W+ G + E+ + + PY + + K+++G P S + C
Sbjct: 182 YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSC 241
Query: 94 LQVNPNDRPTAAQLM 108
P RPT QL+
Sbjct: 242 WHELPEKRPTFQQLL 256
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 194 GYKENVDIWSVGCIMGEMV 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 24/102 (23%)
Query: 23 NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRP----------YFGVEWALFKIAR 72
SL+D + + ++ D+WS G + E+ T C G E + + R
Sbjct: 188 ESLSDNIFSRQS-------DVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCR 240
Query: 73 -------GELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQL 107
G+ P P + + + + C +P DRP+ + L
Sbjct: 241 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 282
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 200 GYKENVDIWSVGCIMGEMV 218
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 44/122 (36%), Gaps = 45/122 (36%)
Query: 36 GYGLPADIWSVGCTVLEML--------------------------------TRCRPYF-- 61
G+ P D+WS+GC + E TR + YF
Sbjct: 224 GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYK 283
Query: 62 -GVEW----ALFKIARGELPPIPDSVSRDAR------DFILKCLQVNPNDRPTAAQLMEH 110
G+ W + + + P+ + +D+ D + + L+ +P R T A+ + H
Sbjct: 284 GGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH 343
Query: 111 PF 112
PF
Sbjct: 344 PF 345
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 202 GYKENVDIWSVGCIMGEMV 220
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
Score = 25.4 bits (54), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 18 HVSRWNSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPP 77
++ +WN + +Q+ G PA + + TV + Y G ++ K+ L P
Sbjct: 230 YIDQWNKVIEQL------GTPCPAFMKKLQPTVRNYVENRPKYAG--YSFEKLFPDVLFP 281
Query: 78 IPDSVSR----DARDFILKCLQVNPNDRPTAAQLMEHPFV 113
++ ARD + K L ++ + R + + ++HP++
Sbjct: 282 ADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 239 GYKENVDIWSVGCIMGEMV 257
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 202 GYKENVDIWSVGCIMGEMV 220
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 239 GYKENVDIWSVGCIMGEMV 257
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 194 GYKENVDIWSVGCIMGEMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 195 GYKENVDIWSVGCIMGEMV 213
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY DIWSVGC + EM+
Sbjct: 195 GYKENVDIWSVGCIMGEMV 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 24/102 (23%)
Query: 23 NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRP----------YFGVEWALFKIAR 72
SL+D + + ++ D+WS G + E+ T C G E + ++R
Sbjct: 187 ESLSDNIFSRQS-------DVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSR 239
Query: 73 -------GELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQL 107
G+ P P + + + + C +P DRP+ + L
Sbjct: 240 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 281
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEW------ALFKIARGELPPIPDSV--SRDARDF 89
G AD+WS G T+ ML P+ E + +I + IPD V S + R
Sbjct: 194 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY-AIPDYVHISPECRHL 252
Query: 90 ILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
I + +P R + ++ H + + LP
Sbjct: 253 ISRIFVADPAKRISIPEIRNHEWFLKNLPAD 283
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEW------ALFKIARGELPPIPDSV--SRDARDF 89
G AD+WS G T+ ML P+ E + +I + IPD V S + R
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY-AIPDYVHISPECRHL 253
Query: 90 ILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
I + +P R + ++ H + + LP
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEWFLKNLPAD 284
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEW------ALFKIARGELPPIPDSV--SRDARDF 89
G AD+WS G T+ ML P+ E + +I + IPD V S + R
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY-AIPDYVHISPECRHL 253
Query: 90 ILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
I + +P R + ++ H + + LP
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEWFLKNLPAD 284
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEW------ALFKIARGELPPIPDSV--SRDARDF 89
G AD+WS G T+ ML P+ E + +I + IPD V S + R
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY-AIPDYVHISPECRHL 253
Query: 90 ILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
I + +P R + ++ H + + LP
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEWFLKNLPAD 284
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 49/133 (36%), Gaps = 49/133 (36%)
Query: 37 YGLPADIWSVGCTVLEMLT-----RCR--------PY--------FGV-------EWALF 68
Y DIW++GC E+LT CR PY F V +W
Sbjct: 213 YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDI 272
Query: 69 KIARGELPPIPD------------------SVSRDARDFIL--KCLQVNPNDRPTAAQLM 108
K + D V D++ F L K L ++P R T+ Q M
Sbjct: 273 KKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM 332
Query: 109 EHP-FVKRPLPTS 120
+ P F++ PLPTS
Sbjct: 333 QDPYFLEDPLPTS 345
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 24/102 (23%)
Query: 23 NSLTDQVVNSKNGGYGLPADIWSVGCTVLEMLTRCRP----------YFGVEWALFKIAR 72
SL+D + + + +D+WS G + E+ T C G E + + R
Sbjct: 184 ESLSDNIFSRQ-------SDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCR 236
Query: 73 -------GELPPIPDSVSRDARDFILKCLQVNPNDRPTAAQL 107
G+ P P + + + + C +P DRP+ + L
Sbjct: 237 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 278
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTR-CRPYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +DIWS G + E+ + +PY G + + I ++ P PD ++
Sbjct: 222 GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMI 281
Query: 92 KCLQVNPNDRP 102
+C P+ RP
Sbjct: 282 ECWNEFPSRRP 292
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Query: 38 GLPADIWSVGCTVLEMLTRCRPYFGVEW------ALFKIARGELPPIPDSV--SRDARDF 89
G AD+WS G T+ ML P+ E + +I + IPD V S + R
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY-AIPDYVHISPECRHL 253
Query: 90 ILKCLQVNPNDRPTAAQLMEHPFVKRPLPTS 120
I + +P R + ++ H + + LP
Sbjct: 254 ISRIFVADPAKRISIPEIRNHEWFLKNLPAD 284
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 35 GGYGLPADIWSVGCTVLEMLTR-CRPYFGV--EWALFKIARGELPPIPDSVSRDARDFIL 91
G + + +DIWS G + E+ + +PY G + + I ++ P PD ++
Sbjct: 205 GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMI 264
Query: 92 KCLQVNPNDRP 102
+C P+ RP
Sbjct: 265 ECWNEFPSRRP 275
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 42 DIWSVGCTVLEMLTRCRPYFGVEWA--LFKIARGE----LPPIPDSVSRDARDFI--LKC 93
D W++G EM P++ A KI + LP + + V +ARDFI L C
Sbjct: 252 DWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC 311
Query: 94 LQVNPNDRPTAAQLMEHPF 112
R A HPF
Sbjct: 312 PPETRLGRGGAGDFRTHPF 330
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Query: 37 YGLPADIWSVGCTVLEMLTRCR---PYFGVEWALFKIARGELPPIPDSVSRDARDFILKC 93
+ +D+WS G + E+ + R P ++ + ++ +G PD D + C
Sbjct: 363 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNC 422
Query: 94 LQVNPNDRPTAAQLMEH 110
++ RPT QL E
Sbjct: 423 WHLDAATRPTFLQLREQ 439
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFGVEWALFKIARGELPPIPDS------VSRDARDFILKCL 94
ADI+++ C + E LT PY G + ++ + P P + V+ DA I +
Sbjct: 216 ADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPSTVRPGIPVAFDA--VIARGX 273
Query: 95 QVNPNDR 101
NP DR
Sbjct: 274 AKNPEDR 280
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFKIARGELPPIPDSVSRDARDFILKCLQ 95
YG D W+ G + EML P+ G E LF+ P S+S++A +
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMT 578
Query: 96 VNPNDRPTAA-----QLMEHPFVK 114
+P R + EH F +
Sbjct: 579 KHPGKRLGCGPEGERDIKEHAFFR 602
>pdb|3RXY|A Chain A, Crystal Structure Of Nif3 Superfamily Protein From
Sphaerobacter Thermophilus
pdb|3RXY|B Chain B, Crystal Structure Of Nif3 Superfamily Protein From
Sphaerobacter Thermophilus
pdb|3RXY|C Chain C, Crystal Structure Of Nif3 Superfamily Protein From
Sphaerobacter Thermophilus
pdb|3RXY|D Chain D, Crystal Structure Of Nif3 Superfamily Protein From
Sphaerobacter Thermophilus
pdb|3RXY|E Chain E, Crystal Structure Of Nif3 Superfamily Protein From
Sphaerobacter Thermophilus
pdb|3RXY|F Chain F, Crystal Structure Of Nif3 Superfamily Protein From
Sphaerobacter Thermophilus
Length = 278
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 78 IPDSVSRDARD-----FILKCLQVNPNDRPTAAQLMEHPFVKRPLP 118
+P + +RDA +L+ N + P+ A+L+E PF+ LP
Sbjct: 93 VPATAARDAIQGLLTRSLLRAQSANHDHTPSVARLLEXPFLNIHLP 138
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY D+WSVGC + EM+
Sbjct: 201 GYKENVDLWSVGCIMGEMV 219
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFKIARGELPPIPDSVSRDARDFILKCLQ 95
YG D W+ G + EML P+ G E LF+ P S+S++A +
Sbjct: 198 YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMT 257
Query: 96 VNPNDRPTAA-----QLMEHPFVK 114
+P R + EH F +
Sbjct: 258 KHPGKRLGCGPEGERDIKEHAFFR 281
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY D+WSVGC + EM+
Sbjct: 195 GYKENVDLWSVGCIMGEMV 213
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFKIARGELPPIPDSVSRDARDFILKCLQ 95
YG D W+ G + EML P+ G E LF+ P S+S++A +
Sbjct: 197 YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMT 256
Query: 96 VNPNDRPTAA-----QLMEHPFVKR 115
+P R + EH F +R
Sbjct: 257 KHPAKRLGCGPEGERDVREHAFFRR 281
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 36 GYGLPADIWSVGCTVLEML 54
GY D+WSVGC + EM+
Sbjct: 206 GYKENVDLWSVGCIMGEMV 224
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 42 DIWSVGCTVLEMLTRCRPY 60
DIWS C +L ML C P+
Sbjct: 252 DIWSSCCMMLHMLNGCHPW 270
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 42 DIWSVGCTVLEMLTRCRPY 60
DIWS C +L ML C P+
Sbjct: 254 DIWSSCCMMLHMLNGCHPW 272
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 26.6 bits (57), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 42 DIWSVGCTVLEMLTRCRPY 60
DIWS C +L ML C P+
Sbjct: 238 DIWSSCCMMLHMLNGCHPW 256
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRCR-PYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKC 93
+ +D+W + E+L+ + P+F +E + + +G+ P PD + +C
Sbjct: 191 FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRC 250
Query: 94 LQVNPNDRPTAAQLM 108
+P+DRP +L+
Sbjct: 251 WDYDPSDRPRFTELV 265
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 41 ADIWSVGCTVLEMLTRCR-PYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKCLQVN 97
+D+W + E+L+ + P+F +E + + +G+ P PD + +C +
Sbjct: 207 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYD 266
Query: 98 PNDRPTAAQLM 108
P+DRP +L+
Sbjct: 267 PSDRPRFTELV 277
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 37 YGLPADIWSVGCTVLEMLTRCR-PYFGVEW--ALFKIARGELPPIPDSVSRDARDFILKC 93
+ +D+W + E+L+ + P+F +E + + +G+ P PD + +C
Sbjct: 187 FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRC 246
Query: 94 LQVNPNDRPTAAQLM 108
+P+DRP +L+
Sbjct: 247 WDYDPSDRPRFTELV 261
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 26.2 bits (56), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Query: 41 ADIWSVGCTVLEMLTRCRPYFGV---EWALFKIARGELPPIPDSVSRDARDFILKCLQVN 97
AD WS + E++TR P+ + E G P IP +S C +
Sbjct: 192 ADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPGISPHVSKLXKICXNED 251
Query: 98 PNDRP 102
P RP
Sbjct: 252 PAKRP 256
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 26.2 bits (56), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 37 YGLPADIWSVGCTVLEMLTRCRPYFGV-EWALFKIARGELPPIPDSVSRDARDFILKCLQ 95
YG D W++G + EML P+ E LF+ + P + DA + +
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMT 260
Query: 96 VNPNDR-PTAAQLMEHPFVKRPL 117
NP R + Q EH ++ P
Sbjct: 261 KNPTMRLGSLTQGGEHAILRHPF 283
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 25.8 bits (55), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 86 ARDFILKCLQVNPNDRPTAAQLMEHPFV 113
ARD + K L ++ + R + + ++HP++
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 25.8 bits (55), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 86 ARDFILKCLQVNPNDRPTAAQLMEHPFV 113
ARD + K L ++ + R + + ++HP++
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI 321
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.458
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,600,394
Number of Sequences: 62578
Number of extensions: 181301
Number of successful extensions: 1636
Number of sequences better than 100.0: 839
Number of HSP's better than 100.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 266
Number of HSP's that attempted gapping in prelim test: 714
Number of HSP's gapped (non-prelim): 1005
length of query: 133
length of database: 14,973,337
effective HSP length: 88
effective length of query: 45
effective length of database: 9,466,473
effective search space: 425991285
effective search space used: 425991285
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 46 (22.3 bits)