BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032793
(133 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B9KAB9|DNAJ_THENN Chaperone protein DnaJ OS=Thermotoga neapolitana (strain ATCC 49049
/ DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1
Length = 370
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 13/67 (19%)
Query: 64 YLIAGAAAVALLGTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCN 123
Y I + + GT PI + R + CP C G G SG I C RC
Sbjct: 132 YTIEVNLSDLINGTEIPIEYERYETCPRCGGTGVEPDSGY-------------ISCPRCG 178
Query: 124 GLGKLNQ 130
G G++ +
Sbjct: 179 GTGRIRE 185
>sp|P47265|DNAJ_MYCGE Chaperone protein DnaJ OS=Mycoplasma genitalium (strain ATCC 33530
/ G-37 / NCTC 10195) GN=dnaJ PE=3 SV=1
Length = 389
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 87 DMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGK 127
D+C +C+G GFV K+ ++ + Q++C+ CNG GK
Sbjct: 180 DLCKDCNGNGFVIKNQRSIFGTI----QSQVLCSTCNGQGK 216
>sp|Q9HRY3|DNAJ_HALSA Chaperone protein DnaJ OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=dnaJ PE=3 SV=1
Length = 391
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 76 GTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKLN 129
G+G+P + CP+CDG G V + T ++ E C+RC G G+L+
Sbjct: 170 GSGYPEDADVR-TCPQCDGQGVVTQVRQTPLGRVQQRQE----CSRCGGEGELH 218
>sp|B0R3H3|DNAJ_HALS3 Chaperone protein DnaJ OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=dnaJ PE=3 SV=1
Length = 391
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 76 GTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKLN 129
G+G+P + CP+CDG G V + T ++ E C+RC G G+L+
Sbjct: 170 GSGYPEDADVR-TCPQCDGQGVVTQVRQTPLGRVQQRQE----CSRCGGEGELH 218
>sp|Q044A8|DNAJ_LACGA Chaperone protein DnaJ OS=Lactobacillus gasseri (strain ATCC 33323
/ DSM 20243) GN=dnaJ PE=3 SV=1
Length = 388
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 13/54 (24%)
Query: 73 ALLGTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLG 126
A+ G I ++R ++CP CDG+G A K I C +C+G G
Sbjct: 142 AIKGKKTDITYTRSEVCPTCDGSG-------------AEKGTHPITCDKCHGTG 182
>sp|A0LJ41|DNAJ_SYNFM Chaperone protein DnaJ OS=Syntrophobacter fumaroxidans (strain DSM
10017 / MPOB) GN=dnaJ PE=3 SV=1
Length = 384
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 8/45 (17%)
Query: 84 SRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKL 128
+R+ +CP C G+G V +S R +A C RC G+GK+
Sbjct: 159 TRETVCPVCQGSGQVVQSQGFFRISA--------TCTRCQGMGKV 195
>sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2
Length = 419
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 18/75 (24%)
Query: 75 LGTGFPILFSRKDMCPECDGAGFVRKSGATLRANAAR---------------KDEVQIVC 119
LGT + SRK +C +C+G G KSGA+++ + +VQ C
Sbjct: 135 LGTTKKLSLSRKALCSKCNGKG--SKSGASMKCGGCQGSGMKISIRQFGPGMMQQVQHAC 192
Query: 120 ARCNGLGK-LNQIDK 133
C G G+ +N D+
Sbjct: 193 NDCKGTGETINDRDR 207
>sp|Q6NG14|DNAJ1_CORDI Chaperone protein DnaJ 1 OS=Corynebacterium diphtheriae (strain
ATCC 700971 / NCTC 13129 / Biotype gravis) GN=dnaJ1 PE=3
SV=1
Length = 375
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 13/61 (21%)
Query: 73 ALLGTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKLNQID 132
A LGT PI +C C+G G KS VC+ CNG G++ Q+
Sbjct: 124 AYLGTKKPITIDTAILCDRCEGTGSKSKSKPN-------------VCSTCNGSGEIQQMQ 170
Query: 133 K 133
+
Sbjct: 171 R 171
>sp|Q74IT7|DNAJ_LACJO Chaperone protein DnaJ OS=Lactobacillus johnsonii (strain CNCM
I-12250 / La1 / NCC 533) GN=dnaJ PE=3 SV=1
Length = 388
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 13/54 (24%)
Query: 73 ALLGTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLG 126
A+ G I ++R ++CP CDG+G A K I C +C+G G
Sbjct: 142 AIKGKKTDITYTRSEVCPTCDGSG-------------AEKGTHPITCDKCHGSG 182
>sp|Q02VR5|DNAJ_LACLS Chaperone protein DnaJ OS=Lactococcus lactis subsp. cremoris
(strain SK11) GN=dnaJ PE=3 SV=1
Length = 379
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 13/72 (18%)
Query: 58 SADGTTYLIAGAAAVALLGTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKDEVQI 117
D Y I A+ G + ++R+++C CDG+G A A E
Sbjct: 123 QGDDLQYRINLKFEEAIFGVEKQVKYNREELCHTCDGSG----------AKAGTHPE--- 169
Query: 118 VCARCNGLGKLN 129
C +C G G++N
Sbjct: 170 TCHKCGGRGQIN 181
>sp|B2G6W4|DNAJ_LACRJ Chaperone protein DnaJ OS=Lactobacillus reuteri (strain JCM 1112)
GN=dnaJ PE=3 SV=1
Length = 383
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 89 CPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKL 128
CP C GAG + ++R + Q C CNG GK+
Sbjct: 168 CPRCHGAGVI----TSVRQTPLGNMQTQTTCPECNGTGKI 203
>sp|A5VJE8|DNAJ_LACRD Chaperone protein DnaJ OS=Lactobacillus reuteri (strain DSM 20016)
GN=dnaJ PE=3 SV=1
Length = 383
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 89 CPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKL 128
CP C GAG + ++R + Q C CNG GK+
Sbjct: 168 CPRCHGAGVI----TSVRQTPLGNMQTQTTCPECNGTGKI 203
>sp|P35514|DNAJ_LACLA Chaperone protein DnaJ OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=dnaJ PE=3 SV=2
Length = 379
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 13/83 (15%)
Query: 58 SADGTTYLIAGAAAVALLGTGFPILFSRKDMCPECDGAG--------FVRKSGATLRANA 109
D Y I A+ G + ++R+++C C G+G K G + N
Sbjct: 123 QGDDLQYRINLKFEEAIFGVEKQVKYNREELCHTCGGSGAKAGTHPETCHKCGGRGQINV 182
Query: 110 AR-----KDEVQIVCARCNGLGK 127
R + + Q+ C CNG GK
Sbjct: 183 VRDTPLGRMQTQVTCDVCNGTGK 205
>sp|B1LCI2|DNAJ_THESQ Chaperone protein DnaJ OS=Thermotoga sp. (strain RQ2) GN=dnaJ PE=3
SV=1
Length = 369
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 13/78 (16%)
Query: 64 YLIAGAAAVALLGTGFPILFSRKDMCPECDG------AGFVR--KSGATLRANAARKDEV 115
Y I + + G P+ + R + CP C G AG++ G T R R+
Sbjct: 131 YEIEVTLSDLINGAEIPVEYERYETCPRCGGTGVEPNAGYINCPSCGGTGRIREERRSFF 190
Query: 116 -----QIVCARCNGLGKL 128
+ C RC G GK+
Sbjct: 191 GYFVSERTCERCGGTGKI 208
>sp|A5IIT4|DNAJ_THEP1 Chaperone protein DnaJ OS=Thermotoga petrophila (strain RKU-1 /
ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1
Length = 369
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 13/78 (16%)
Query: 64 YLIAGAAAVALLGTGFPILFSRKDMCPECDG------AGFVR--KSGATLRANAARKDEV 115
Y I + + G P+ + R + CP C G AG++ G T R R+
Sbjct: 131 YEIEVTLSDLINGAEIPVEYERYETCPRCGGTGVEPNAGYINCPSCGGTGRIREERRSFF 190
Query: 116 -----QIVCARCNGLGKL 128
+ C RC G GK+
Sbjct: 191 GYFVSERTCERCGGTGKI 208
>sp|Q2S030|DNAJ_SALRD Chaperone protein DnaJ OS=Salinibacter ruber (strain DSM 13855 /
M31) GN=dnaJ PE=3 SV=1
Length = 388
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 88 MCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKL 128
MCP+CDG G +R+ ++ VQ C RC G G++
Sbjct: 172 MCPKCDGTGEIRQVSRSVFGQVVN---VQ-PCPRCEGEGRI 208
>sp|Q9HJ83|DNAJ_THEAC Chaperone protein DnaJ OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=dnaJ PE=3 SV=1
Length = 365
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 14/55 (25%)
Query: 73 ALLGTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGK 127
A GT I + R MCP+C+G G K+G I C CNG G+
Sbjct: 136 AYYGTEKRIKYRRNAMCPDCNGTG--AKNGKL------------ITCPTCNGTGQ 176
>sp|A5UYW4|DNAJ_ROSS1 Chaperone protein DnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ
PE=3 SV=1
Length = 370
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 13/67 (19%)
Query: 64 YLIAGAAAVALLGTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCN 123
Y ++ + A+ G I F R + CP C G+G A + C +C
Sbjct: 116 YTLSISFEEAVFGVEKTIEFRRLETCPACRGSG-------------AEPGTEPVRCPKCG 162
Query: 124 GLGKLNQ 130
GLG++ Q
Sbjct: 163 GLGEIRQ 169
>sp|B7IFE0|DNAJ_THEAB Chaperone protein DnaJ OS=Thermosipho africanus (strain TCF52B)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 13/54 (24%)
Query: 73 ALLGTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLG 126
GT PI + R ++C C+G G SG + C +C+G G
Sbjct: 146 VFTGTTIPIEYDRYEVCSHCNGEGVEPGSGW-------------VSCPKCHGTG 186
>sp|Q9HHB8|DNAJ_HALMT Chaperone protein DnaJ OS=Haloferax mediterranei (strain ATCC 33500
/ DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4)
GN=dnaJ PE=3 SV=1
Length = 384
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 13/55 (23%)
Query: 73 ALLGTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGK 127
A G + R+++CPECDG G + C+ CNG G+
Sbjct: 144 AYHGVERDVTIRRREVCPECDGEGHPADADVN-------------TCSECNGSGQ 185
>sp|B8F7S3|DNAJ_HAEPS Chaperone protein DnaJ OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=dnaJ PE=3 SV=1
Length = 378
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 10/50 (20%)
Query: 84 SRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKLNQIDK 133
S+ + CP C G+G VR+ + VC C+G GK +IDK
Sbjct: 160 SKVETCPHCHGSGRVRRQQGFFM--------TETVCPSCHGTGK--KIDK 199
>sp|O35824|DNJA2_RAT DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2
PE=2 SV=1
Length = 412
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 18/67 (26%)
Query: 83 FSRKDMCPECDGAGFVRKSGATLRANAARK---------------DEVQIVCARCNGLGK 127
S+ +C C G G KSGA + +A R ++Q VC+ CNG G+
Sbjct: 137 LSKNVLCSACSGQG--GKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGE 194
Query: 128 -LNQIDK 133
+N+ D+
Sbjct: 195 VINEKDR 201
>sp|Q9QYJ0|DNJA2_MOUSE DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1
SV=1
Length = 412
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 18/67 (26%)
Query: 83 FSRKDMCPECDGAGFVRKSGATLRANAARK---------------DEVQIVCARCNGLGK 127
S+ +C C G G KSGA + +A R ++Q VC+ CNG G+
Sbjct: 137 LSKNVLCSACSGQG--GKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGE 194
Query: 128 -LNQIDK 133
+N+ D+
Sbjct: 195 VINEKDR 201
>sp|O60884|DNJA2_HUMAN DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1
SV=1
Length = 412
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 18/67 (26%)
Query: 83 FSRKDMCPECDGAGFVRKSGATLRANAARK---------------DEVQIVCARCNGLGK 127
S+ +C C G G KSGA + +A R ++Q VC+ CNG G+
Sbjct: 137 LSKNVLCSACSGQG--GKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGE 194
Query: 128 -LNQIDK 133
+N+ D+
Sbjct: 195 VINEKDR 201
>sp|Q2HJ94|DNJA2_BOVIN DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1
Length = 412
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 18/67 (26%)
Query: 83 FSRKDMCPECDGAGFVRKSGATLRANAARK---------------DEVQIVCARCNGLGK 127
S+ +C C G G KSGA + +A R ++Q VC+ CNG G+
Sbjct: 137 LSKNVLCSACSGQG--GKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGE 194
Query: 128 -LNQIDK 133
+N+ D+
Sbjct: 195 VINEKDR 201
>sp|Q9WZV3|DNAJ_THEMA Chaperone protein DnaJ OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=dnaJ PE=3 SV=1
Length = 369
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 13/78 (16%)
Query: 64 YLIAGAAAVALLGTGFPILFSRKDMCPECDGAGFVRKS--------GATLRANAARKDEV 115
Y I + + G P+ + R + CP C G G + G T R R+
Sbjct: 131 YEIEVTLSDLINGAEIPVEYERYETCPRCGGTGVEPNAGYMDCPSCGGTGRIREERRSFF 190
Query: 116 -----QIVCARCNGLGKL 128
+ C RC G GK+
Sbjct: 191 GYFVSERTCERCGGTGKI 208
>sp|A1C4Z4|SLX1_ASPCL Structure-specific endonuclease subunit slx1 OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=slx1 PE=3 SV=1
Length = 434
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 13 SSTTKNLDVARSPSVSSFFAVPRPINRTQKNKKRSLT 49
S T + L+ R PSVS P+ N+ ++ +RSLT
Sbjct: 121 SQTPQPLEFERDPSVSKSLGTPKRKNQRRRRPQRSLT 157
>sp|Q94AW8|DNAJ3_ARATH Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2
Length = 420
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 18/75 (24%)
Query: 75 LGTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKD---------------EVQIVC 119
LGT + SR +C +C+G G KSGA+L+ + ++Q C
Sbjct: 134 LGTMKKLSLSRNALCSKCNGKG--SKSGASLKCGGCQGSGMKVSIRQLGPGMIQQMQHAC 191
Query: 120 ARCNGLGK-LNQIDK 133
C G G+ +N D+
Sbjct: 192 NECKGTGETINDRDR 206
>sp|A7NS65|DNAJ_ROSCS Chaperone protein DnaJ OS=Roseiflexus castenholzii (strain DSM
13941 / HLO8) GN=dnaJ PE=3 SV=1
Length = 370
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 13/67 (19%)
Query: 64 YLIAGAAAVALLGTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCN 123
Y ++ + A+ G I + R + CP C G+G A + C +C
Sbjct: 116 YTLSISFEEAIFGVEKTIEYRRMETCPACRGSG-------------AEPGTEPVRCPKCG 162
Query: 124 GLGKLNQ 130
GLG++ Q
Sbjct: 163 GLGEIRQ 169
>sp|Q58598|Y1198_METJA Uncharacterized protein MJ1198 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1198 PE=1 SV=1
Length = 761
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
Query: 76 GTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARK------DEVQIVCARCNGLGKL 128
GTG ++ + CP C+G GF+ + K D +I C +C G GK+
Sbjct: 10 GTGKKVV--KYKTCPVCEGTGFIDEFSPKQHMKRVSKRATYDLDYGEIPCPKCKGTGKV 66
>sp|Q9KJT8|DNAJ_PEWBP Chaperone protein DnaJ OS=Peanut witches'-broom phytoplasma GN=dnaJ
PE=3 SV=1
Length = 368
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 27/102 (26%)
Query: 27 VSSFFAVPRPINRTQKNKKRSLTVVAAAGDVSADGTTYLIAGAAAVALLGTGFPILFSRK 86
SSFF R NR Q+ D+ + + + ++LGT + F+ K
Sbjct: 97 FSSFFG-RRKSNRHQE-------------DIKGEDHHIKLTISFMESVLGTQKTVTFNVK 142
Query: 87 DMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKL 128
+ C +CDG G A K++++I C C G G +
Sbjct: 143 ENCEKCDGTG------------AKTKNDIRI-CNVCKGNGYI 171
>sp|Q46XI8|DNAJ_CUPPJ Chaperone protein DnaJ OS=Cupriavidus pinatubonensis (strain JMP134
/ LMG 1197) GN=dnaJ PE=3 SV=1
Length = 379
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 8/42 (19%)
Query: 87 DMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKL 128
+ CP C GAG VR S +Q C +C+G GK
Sbjct: 167 ETCPTCHGAGQVRVSQGFF--------SMQQTCPKCHGSGKF 200
>sp|Q8RB67|DNAJ_THETN Chaperone protein DnaJ OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=dnaJ PE=3
SV=1
Length = 384
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 84 SRKDMCPECDGAGFVRKSGATLRANAARKDEVQI-VCARCNGLGKL 128
SR + CP C G G +R++ T V I C RC+G GK+
Sbjct: 167 SRPETCPVCHGTGEIRQTQNTPFGRI-----VNIRTCPRCHGEGKI 207
>sp|B3R6G6|DNAJ_CUPTR Chaperone protein DnaJ OS=Cupriavidus taiwanensis (strain R1 / LMG
19424) GN=dnaJ PE=3 SV=1
Length = 377
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 8/42 (19%)
Query: 87 DMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKL 128
+ CP C GAG VR S +Q C +C+G GK
Sbjct: 165 ETCPTCHGAGQVRVSQGFFT--------MQQTCPKCHGSGKF 198
>sp|B1ZUS0|DNAJ_OPITP Chaperone protein DnaJ OS=Opitutus terrae (strain DSM 11246 /
PB90-1) GN=dnaJ PE=3 SV=1
Length = 382
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 84 SRKDMCPECDGAGFVRKSGATLRAN------AARKDEVQIVCARCNGLGKLNQIDK 133
S++ CP C GAG VR+SG + +++ C C+G G++ + K
Sbjct: 171 SKRVTCPTCRGAGQVRRSGGIITFTQTCPTCGGMGTKIEKPCTVCHGEGRVRRTTK 226
>sp|B2JGE1|DNAJ_BURP8 Chaperone protein DnaJ OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=dnaJ PE=3 SV=1
Length = 377
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 8/43 (18%)
Query: 84 SRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLG 126
++ + CP C+G+G VR S +Q C +C+G G
Sbjct: 162 TKPETCPTCNGSGAVRMSQGFF--------SIQQTCPKCHGTG 196
>sp|Q88YI7|UVRA_LACPL UvrABC system protein A OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=uvrA PE=3 SV=1
Length = 951
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 66 IAGAAAVALLGTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGL 125
++G A+A + G PI+FS CP C GF + L + Q C C GL
Sbjct: 229 LSGGYAIADVIGGEPIMFSEHYACPIC---GF---TVGELEPRLFSFNAPQGACPDCEGL 282
Query: 126 GKLNQIDK 133
G ++D+
Sbjct: 283 GIKLEVDE 290
>sp|Q8G6C6|DNAJ_BIFLO Chaperone protein DnaJ OS=Bifidobacterium longum (strain NCC 2705)
GN=dnaJ PE=3 SV=1
Length = 381
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 89 CPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKLNQ 130
CP+C G GF++K T+ C RC G G + Q
Sbjct: 159 CPDCHGQGFMQKVVRTMLGQMM----TSAPCERCEGHGTIIQ 196
>sp|B0SRF0|DNAJ_LEPBP Chaperone protein DnaJ OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / ATCC 23582 / Paris) GN=dnaJ PE=3 SV=1
Length = 375
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 8/41 (19%)
Query: 88 MCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKL 128
+CP+C G G VR++ V C RC G GK+
Sbjct: 171 VCPDCSGTGQVRRTQGFF--------SVTTTCPRCKGKGKV 203
>sp|B0SHT0|DNAJ_LEPBA Chaperone protein DnaJ OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / Ames) GN=dnaJ PE=3 SV=1
Length = 375
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 8/41 (19%)
Query: 88 MCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKL 128
+CP+C G G VR++ V C RC G GK+
Sbjct: 171 VCPDCSGTGQVRRTQGFF--------SVTTTCPRCKGKGKV 203
>sp|A6LJ63|DNAJ_THEM4 Chaperone protein DnaJ OS=Thermosipho melanesiensis (strain BI429 /
DSM 12029) GN=dnaJ PE=3 SV=1
Length = 373
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Query: 89 CPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKL 128
CP+C G G VR+ T Q C +C G GK+
Sbjct: 174 CPKCHGTGTVREERRTFLGVIVN----QYTCNQCGGTGKI 209
>sp|B2UBP2|DNAJ_RALPJ Chaperone protein DnaJ OS=Ralstonia pickettii (strain 12J) GN=dnaJ
PE=3 SV=1
Length = 382
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 8/42 (19%)
Query: 87 DMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKL 128
+ CP C GAG VR S +Q C +C+G GK
Sbjct: 169 ETCPTCHGAGQVRVSQGFFT--------MQQTCPKCHGSGKY 202
>sp|Q0K758|DNAJ_CUPNH Chaperone protein DnaJ OS=Cupriavidus necator (strain ATCC 17699 /
H16 / DSM 428 / Stanier 337) GN=dnaJ PE=3 SV=1
Length = 381
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 8/42 (19%)
Query: 87 DMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKL 128
+ CP C GAG VR S +Q C +C+G GK
Sbjct: 169 ETCPTCHGAGQVRVSQGFFT--------MQQTCPKCHGSGKY 202
>sp|Q03FR6|DNAJ_PEDPA Chaperone protein DnaJ OS=Pediococcus pentosaceus (strain ATCC
25745 / 183-1w) GN=dnaJ PE=3 SV=1
Length = 374
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 13/65 (20%)
Query: 64 YLIAGAAAVALLGTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCN 123
Y ++ A+ G I +SR+ +C C G+G A++ + C +CN
Sbjct: 123 YQMSLKFEEAIFGKKTTIKYSREALCKTCGGSG-------------AKEGTSPVTCHKCN 169
Query: 124 GLGKL 128
G G +
Sbjct: 170 GTGTI 174
>sp|Q73Q15|DNAJ_TREDE Chaperone protein DnaJ OS=Treponema denticola (strain ATCC 35405 /
CIP 103919 / DSM 14222) GN=dnaJ PE=3 SV=2
Length = 379
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 13/77 (16%)
Query: 54 AGDVSADGTTYLIAGAAAVALLGTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKD 113
AG V Y + + A+ G + ++R + C EC G G +SG++ R
Sbjct: 125 AGPVRGSNLRYDLQISFVDAVYGKKAELSYTRNEKCSECHGTG--SESGSSKR------- 175
Query: 114 EVQIVCARCNGLGKLNQ 130
+C C G G++ Q
Sbjct: 176 ----MCPDCKGTGQVRQ 188
>sp|A3DF24|DNAJ_CLOTH Chaperone protein DnaJ OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=dnaJ PE=3 SV=1
Length = 386
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 13/57 (22%)
Query: 73 ALLGTGFPILFSRKDMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGKLN 129
A GT + SR ++CP C G+G + + C +CNG G++
Sbjct: 141 AAFGTEKEVTVSRLEICPTCSGSG-------------TKPGHQPVTCRQCNGTGQVQ 184
>sp|P48208|DNAJ_HAEDU Chaperone protein DnaJ OS=Haemophilus ducreyi (strain 35000HP /
ATCC 700724) GN=dnaJ PE=3 SV=1
Length = 377
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 8/41 (19%)
Query: 87 DMCPECDGAGFVRKSGATLRANAARKDEVQIVCARCNGLGK 127
+ CP C GAG +R+ A VC C+G GK
Sbjct: 162 ENCPHCHGAGRIRRQQGFFVTEA--------VCPSCHGTGK 194
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,572,645
Number of Sequences: 539616
Number of extensions: 1659756
Number of successful extensions: 5253
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 5181
Number of HSP's gapped (non-prelim): 126
length of query: 133
length of database: 191,569,459
effective HSP length: 99
effective length of query: 34
effective length of database: 138,147,475
effective search space: 4697014150
effective search space used: 4697014150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)