Query 032794
Match_columns 133
No_of_seqs 157 out of 1111
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 09:28:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032794.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032794hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zdn_A Ubiquitin-conjugating e 100.0 3.5E-45 1.2E-49 257.7 14.2 126 5-131 3-129 (158)
2 2fo3_A Ubiquitin-conjugating e 100.0 1E-44 3.5E-49 246.5 13.7 117 15-132 6-124 (125)
3 2h2y_A Ubiquitin-conjugating e 100.0 4.7E-44 1.6E-48 246.3 15.7 117 13-130 18-136 (136)
4 1ayz_A UBC2, ubiquitin-conjuga 100.0 5E-44 1.7E-48 254.1 15.1 119 12-131 1-120 (169)
5 4gpr_A Ubiquitin-conjugating e 100.0 1.4E-43 4.8E-48 247.8 15.4 119 13-132 2-121 (151)
6 2ucz_A UBC7, ubiquitin conjuga 100.0 1.2E-43 4E-48 251.4 15.1 119 12-131 1-134 (165)
7 2aak_A UBC1, ubiquitin conjuga 100.0 1.3E-43 4.4E-48 248.2 15.1 119 12-131 1-120 (152)
8 2ayv_A Ubiquitin-conjugating e 100.0 1E-43 3.5E-48 251.9 14.5 122 9-131 15-137 (166)
9 2e2c_A Ubiquitin conjugating e 100.0 9.4E-44 3.2E-48 249.9 14.1 118 13-131 7-125 (156)
10 2c2v_B Ubiquitin-conjugating e 100.0 3.7E-44 1.3E-48 251.4 11.6 116 15-131 5-121 (154)
11 1z2u_A Ubiquitin-conjugating e 100.0 1.9E-43 6.3E-48 246.9 14.5 117 14-131 3-120 (150)
12 2c4o_A Ubiquitin-conjugating e 100.0 2.6E-43 9E-48 249.6 15.4 121 10-131 14-135 (165)
13 1i7k_A Ubiquitin-conjugating e 100.0 1.4E-43 4.8E-48 253.7 13.6 119 12-131 27-146 (179)
14 2a7l_A Hypothetical ubiquitin- 100.0 2.7E-43 9.1E-48 242.4 13.1 117 7-125 15-136 (136)
15 1yh2_A HSPC150 protein similar 100.0 6.8E-43 2.3E-47 248.4 15.5 118 13-131 2-124 (169)
16 1yrv_A Ubiquitin-conjugating l 100.0 2.2E-43 7.4E-48 250.8 12.9 124 7-131 15-142 (169)
17 2r0j_A Ubiquitin carrier prote 100.0 6E-43 2.1E-47 244.1 14.7 114 17-131 3-117 (149)
18 3h8k_A Ubiquitin-conjugating e 100.0 6.3E-43 2.2E-47 247.4 14.8 117 14-131 2-133 (164)
19 1jat_A Ubiquitin-conjugating e 100.0 3.1E-43 1.1E-47 247.0 12.1 115 16-131 6-121 (155)
20 3rcz_B SUMO-conjugating enzyme 100.0 1.4E-42 4.8E-47 245.4 14.8 118 13-131 8-133 (163)
21 2bep_A Ubiquitin-conjugating e 100.0 1.6E-42 5.3E-47 244.3 14.9 120 11-131 4-128 (159)
22 2gjd_A Ubiquitin-conjugating e 100.0 9.4E-43 3.2E-47 245.0 13.7 119 12-131 1-127 (157)
23 2awf_A Ubiquitin-conjugating e 100.0 1.3E-42 4.5E-47 247.5 13.9 120 11-131 13-147 (172)
24 3rz3_A Ubiquitin-conjugating e 100.0 1.8E-42 6.1E-47 249.0 14.6 119 12-131 4-137 (183)
25 3bzh_A Ubiquitin-conjugating e 100.0 2.3E-42 7.8E-47 250.2 15.0 117 14-131 47-164 (194)
26 1fxt_A Ubiquitin-conjugating e 100.0 7.4E-43 2.5E-47 243.6 11.9 115 16-131 2-119 (149)
27 2grr_A Ubiquitin-conjugating e 100.0 2.9E-42 9.8E-47 243.4 14.7 120 11-131 3-130 (161)
28 2f4z_A Tgtwinscan_2721 - E2 do 100.0 2.4E-42 8.2E-47 249.9 14.0 121 10-131 27-162 (193)
29 2pwq_A Ubiquitin conjugating e 100.0 1.6E-42 5.5E-47 254.5 12.1 120 11-131 19-140 (216)
30 3k9o_A Ubiquitin-conjugating e 100.0 6E-42 2.1E-46 249.4 13.0 119 12-131 2-125 (201)
31 3fn1_B NEDD8-conjugating enzym 100.0 1.6E-41 5.3E-46 240.9 13.8 123 7-131 6-137 (167)
32 3e46_A Ubiquitin-conjugating e 100.0 2.6E-41 9E-46 253.0 15.0 123 8-131 50-177 (253)
33 1wzv_A Ubiquitin-conjugating e 100.0 2.4E-41 8.1E-46 237.4 12.8 115 15-131 4-121 (155)
34 2a4d_A Ubiquitin-conjugating e 100.0 9.7E-41 3.3E-45 235.1 15.4 119 12-131 22-149 (160)
35 2y9m_A Ubiquitin-conjugating e 100.0 7.6E-41 2.6E-45 238.4 14.8 121 11-131 2-137 (172)
36 2f4w_A Ubiquitin-conjugating e 100.0 4.7E-41 1.6E-45 242.2 13.6 124 1-130 3-130 (187)
37 1tte_A Ubiquitin-conjugating e 100.0 5.5E-42 1.9E-46 251.5 8.5 115 16-131 3-120 (215)
38 1y8x_A Ubiquitin-conjugating e 100.0 6.3E-41 2.1E-45 236.3 13.1 115 13-131 4-120 (160)
39 2nvu_C NEDD8-conjugating enzym 100.0 6.2E-41 2.1E-45 240.3 12.9 118 10-131 21-140 (180)
40 2q0v_A Ubiquitin-conjugating e 100.0 7.5E-41 2.6E-45 234.9 12.8 119 11-131 17-143 (156)
41 1jat_B Ubiquitin-conjugating e 100.0 1E-40 3.4E-45 230.2 11.3 115 15-131 6-128 (138)
42 1c4z_D UBCH7, ubiquitin conjug 100.0 1.4E-40 4.7E-45 233.3 10.6 114 16-131 3-119 (154)
43 2hlw_A Ubiquitin-conjugating e 100.0 3.7E-40 1.3E-44 234.3 11.5 118 13-131 33-159 (170)
44 2z5d_A Ubiquitin-conjugating e 100.0 8.7E-41 3E-45 239.1 8.3 113 15-131 25-139 (179)
45 2onu_A Ubiquitin-conjugating e 100.0 1E-40 3.6E-45 233.5 7.5 112 16-131 3-117 (152)
46 1yf9_A Ubiquitin carrier prote 100.0 3.4E-40 1.2E-44 234.8 8.9 113 15-131 12-126 (171)
47 3o2u_A NEDD8-conjugating enzym 100.0 1.8E-39 6.3E-44 234.4 12.5 120 9-132 23-150 (190)
48 1zuo_A Hypothetical protein LO 100.0 4.2E-40 1.5E-44 237.0 8.8 126 7-133 19-162 (186)
49 4ddg_A Ubiquitin-conjugating e 100.0 7.5E-39 2.6E-43 253.5 15.4 117 14-131 2-119 (399)
50 4ds2_A Ubiquitin-conjugating e 100.0 3E-39 1E-43 229.2 9.3 120 11-131 4-141 (167)
51 3ceg_A Baculoviral IAP repeat- 100.0 1.7E-37 5.7E-42 238.6 15.1 121 9-129 70-207 (323)
52 2z6o_A UFM1-conjugating enzyme 100.0 4.1E-30 1.4E-34 179.7 3.9 100 13-118 30-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 3.7E-21 1.2E-25 135.1 9.5 113 18-131 31-161 (162)
54 3kpa_A Probable ubiquitin fold 99.8 1.6E-21 5.3E-26 133.7 1.7 99 14-117 33-145 (168)
55 3obq_A Tumor susceptibility ge 99.6 9.2E-16 3.1E-20 105.9 7.2 103 20-128 25-140 (146)
56 2day_A Ring finger protein 25; 97.0 0.011 3.8E-07 38.8 9.9 105 19-128 12-126 (128)
57 2ebm_A RWD domain-containing p 96.7 0.012 4E-07 38.7 8.0 69 16-85 11-79 (128)
58 2yz0_A Serine/threonine-protei 96.5 0.046 1.6E-06 36.3 10.3 69 16-85 11-86 (138)
59 3zqs_A E3 ubiquitin-protein li 96.4 0.05 1.7E-06 38.5 10.3 81 19-125 5-87 (186)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 95.5 0.079 2.7E-06 35.0 7.7 106 16-126 11-128 (137)
61 2daw_A RWD domain containing p 95.3 0.13 4.4E-06 35.0 8.3 69 13-85 12-99 (154)
62 2ebk_A RWD domain-containing p 94.1 0.12 4.3E-06 33.7 5.7 65 19-84 11-79 (128)
63 2dax_A Protein C21ORF6; RWD do 92.1 0.11 3.7E-06 35.1 3.0 24 62-85 74-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 73.4 3.2 0.00011 19.0 2.3 21 15-35 5-25 (26)
65 2bum_A Protocatechuate 3,4-dio 48.6 18 0.00062 25.6 3.6 26 59-84 109-139 (209)
66 3rls_A YAF9, protein AF-9 homo 39.5 91 0.0031 21.5 6.2 43 41-85 30-72 (175)
67 2bum_B Protocatechuate 3,4-dio 32.8 26 0.0009 25.4 2.4 25 60-84 135-166 (241)
68 2xsu_A Catechol 1,2 dioxygenas 31.1 29 0.00099 26.2 2.5 25 60-84 188-230 (312)
69 2azq_A Catechol 1,2-dioxygenas 30.4 30 0.001 26.1 2.5 25 60-84 184-226 (311)
70 1tmx_A Hydroxyquinol 1,2-dioxy 30.4 31 0.001 25.8 2.5 25 60-84 184-226 (293)
71 3t63_M 3,4-PCD, protocatechuat 29.8 32 0.0011 24.9 2.4 25 60-84 134-165 (238)
72 3n9t_A PNPC; phospholipid bind 29.8 32 0.0011 25.7 2.5 25 60-84 181-223 (290)
73 3t63_A 3,4-PCD, protocatechuat 28.2 39 0.0013 23.7 2.6 24 61-84 102-130 (200)
74 2boy_A 3-chlorocatechol 1,2-di 28.1 36 0.0012 24.9 2.5 25 60-84 154-196 (254)
75 3g9r_A Fusion complex of HIV-1 27.4 50 0.0017 17.0 2.2 14 15-28 28-41 (42)
76 1dmh_A 1,2-CTD, catechol 1,2-d 27.2 37 0.0012 25.6 2.4 25 60-84 187-229 (311)
77 3hhy_A 1,2-CTD, catechol 1,2-d 26.8 35 0.0012 25.4 2.2 25 60-84 183-225 (280)
78 3th1_A Chlorocatechol 1,2-diox 24.4 56 0.0019 24.0 3.0 24 60-83 151-192 (260)
79 3qrl_A Transcription initiatio 24.4 1.6E+02 0.0054 19.5 6.0 42 42-85 31-75 (140)
80 4dac_A Computationally designe 23.0 68 0.0023 14.7 2.3 15 15-29 8-22 (28)
81 2ccv_A Helix pomatia agglutini 21.7 1.5E+02 0.005 18.2 4.3 24 60-84 28-51 (101)
82 3kxt_A Chromatin protein CREN7 21.6 52 0.0018 18.2 1.8 11 65-75 46-56 (56)
83 2rf4_B DNA-directed RNA polyme 21.1 52 0.0018 20.0 1.8 14 14-27 61-74 (87)
84 3o5u_A Chlorocatechol 1,2-diox 20.1 72 0.0025 23.3 2.8 25 60-84 156-199 (257)
No 1
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-45 Score=257.68 Aligned_cols=126 Identities=23% Similarity=0.480 Sum_probs=116.5
Q ss_pred CCcCcccccHHHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEe
Q 032794 5 SAPSRKALSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFL 83 (133)
Q Consensus 5 ~~~~~~~~~~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 83 (133)
.+.+.++++.++.+||++|+++|++++++||.+. .++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.
T Consensus 3 ~~~~~~~~s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 82 (158)
T 1zdn_A 3 MNSNVENLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFL 82 (158)
T ss_dssp -----CCSCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred ccccccccCHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEec
Confidence 3445788999999999999999999999999987 467999999999999999999999999999999999999999999
Q ss_pred cCCCcCccccCCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 84 PPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 84 tp~i~Hpnv~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
| ++|||||+.+|+||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 83 t-~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~ 129 (158)
T 1zdn_A 83 T-KIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPES 129 (158)
T ss_dssp S-CCCCTTBCTTSBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGG
T ss_pred c-CcccCCCCCCCEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCC
Confidence 9 5999999999999999999999999999999999999999999875
No 2
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=1e-44 Score=246.46 Aligned_cols=117 Identities=42% Similarity=0.789 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCC-cCccc
Q 032794 15 IASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAP-LHPHI 92 (133)
Q Consensus 15 ~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i-~Hpnv 92 (133)
++.+||++|+++++++++.|+.+. .++|+++|+++|.||+|||||||.|+++|.||++||++||+|+|.| ++ |||||
T Consensus 6 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t-~i~~HPnv 84 (125)
T 2fo3_A 6 NANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQ-KPPKHTHV 84 (125)
T ss_dssp ---CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECS-SCCCBTTB
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeC-CCCCCCcC
Confidence 467899999999999999999987 4679999999999999999999999999999999999999999999 55 99999
Q ss_pred cCCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCCC
Q 032794 93 YSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKVC 132 (133)
Q Consensus 93 ~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~~ 132 (133)
+.+|+||+++|.++|+|+++|++||.+|+++|.+|+.+++
T Consensus 85 ~~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~~~ 124 (125)
T 2fo3_A 85 YSNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEKKL 124 (125)
T ss_dssp CTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-------
T ss_pred CCCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccccC
Confidence 9999999999999999999999999999999999998753
No 3
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.7e-44 Score=246.32 Aligned_cols=117 Identities=41% Similarity=0.782 Sum_probs=109.9
Q ss_pred cHHHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCC-cCc
Q 032794 13 SKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAP-LHP 90 (133)
Q Consensus 13 ~~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i-~Hp 90 (133)
.+.+.+||++|+++|+++++.|+.+. .++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.| ++ |||
T Consensus 18 ~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t-~i~~HP 96 (136)
T 2h2y_A 18 LGNANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQ-KPPKHT 96 (136)
T ss_dssp TTSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECS-SCCCCT
T ss_pred chHHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeC-CCCCCC
Confidence 34578999999999999999999987 4679999999999999999999999999999999999999999999 55 999
Q ss_pred cccCCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcC
Q 032794 91 HIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVK 130 (133)
Q Consensus 91 nv~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~ 130 (133)
||+.+|+||+++|.++|+|+++|++||.+|+++|.+|+.+
T Consensus 97 nv~~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~k 136 (136)
T 2h2y_A 97 HVYSNGDICLSVLGDDYNPSLSISGLILSIISMLSSAKEK 136 (136)
T ss_dssp TBCTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC-
T ss_pred cCCCCCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCcC
Confidence 9999999999999999999999999999999999999864
No 4
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=5e-44 Score=254.15 Aligned_cols=119 Identities=34% Similarity=0.683 Sum_probs=112.3
Q ss_pred ccHHHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCc
Q 032794 12 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHP 90 (133)
Q Consensus 12 ~~~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hp 90 (133)
|++.+.+||++|+++|+++++.||.+. .++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.| ++|||
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t-~i~HP 79 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLS-EMFHP 79 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS-CCCCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCcccccc-CCccC
Confidence 344678999999999999999999987 4679999999999999999999999999999999999999999999 69999
Q ss_pred cccCCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 91 HIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 91 nv~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
||+.+|+||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 80 NI~~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~ 120 (169)
T 1ayz_A 80 NVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPAS 120 (169)
T ss_dssp TBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSS
T ss_pred CCCCCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCc
Confidence 99999999999999999999999999999999999999875
No 5
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=1.4e-43 Score=247.79 Aligned_cols=119 Identities=40% Similarity=0.698 Sum_probs=113.2
Q ss_pred cHHHHHHHHHHHHHHhhCCCCCcEEee-CCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCcc
Q 032794 13 SKIASNRLQKELVEWQVNPPAGFKHKV-TDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPH 91 (133)
Q Consensus 13 ~~~~~~Rl~~El~~l~~~~~~~~~~~~-~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpn 91 (133)
++.+.+||++|+++|+++++.||++.. ++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.| ++||||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t-~i~HPn 80 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMT-KVYHPN 80 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESS-CCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEec-Ccccce
Confidence 457899999999999999999999874 679999999999999999999999999999999999999999999 599999
Q ss_pred ccCCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCCC
Q 032794 92 IYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKVC 132 (133)
Q Consensus 92 v~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~~ 132 (133)
|+.+|+||+++|.++|+|+++|++||.+|+++|.+|++++-
T Consensus 81 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p 121 (151)
T 4gpr_A 81 INKNGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDP 121 (151)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSC
T ss_pred ECCCCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCc
Confidence 99999999999999999999999999999999999998763
No 6
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-43 Score=251.41 Aligned_cols=119 Identities=37% Similarity=0.769 Sum_probs=111.6
Q ss_pred ccHHHHHHHHHHHHHHhhCCCCCcEEee-C-CCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcC
Q 032794 12 LSKIASNRLQKELVEWQVNPPAGFKHKV-T-DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLH 89 (133)
Q Consensus 12 ~~~~~~~Rl~~El~~l~~~~~~~~~~~~-~-~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~H 89 (133)
|++++.+||++|+++|++++++||++.. + +|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.| ++||
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t-~i~H 79 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTP-SILH 79 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS-CCSC
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeC-CCcc
Confidence 4567899999999999999999999874 3 69999999999999999999999999999999999999999999 5999
Q ss_pred ccccCCCeeecccC-------------CCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 90 PHIYSNGHICLDIL-------------YDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 90 pnv~~~G~vcl~~l-------------~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
|||+.+|+||+++| .++|+|+++|++||.+|+++|.+|++++
T Consensus 80 PNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~ 134 (165)
T 2ucz_A 80 PNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIES 134 (165)
T ss_dssp TTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGG
T ss_pred CCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999 6789999999999999999999999865
No 7
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=1.3e-43 Score=248.22 Aligned_cols=119 Identities=35% Similarity=0.674 Sum_probs=112.6
Q ss_pred ccHHHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCc
Q 032794 12 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHP 90 (133)
Q Consensus 12 ~~~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hp 90 (133)
|++.+.+||++|+++|+++++.||.+. .++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.| ++|||
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-~i~HP 79 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVS-RMFHP 79 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS-CCCCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEec-CcccC
Confidence 345678999999999999999999987 5679999999999999999999999999999999999999999999 59999
Q ss_pred cccCCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 91 HIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 91 nv~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
||+.+|+||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 80 nv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 120 (152)
T 2aak_A 80 NIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120 (152)
T ss_dssp TBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTS
T ss_pred CCCCCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCc
Confidence 99999999999999999999999999999999999999875
No 8
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1e-43 Score=251.86 Aligned_cols=122 Identities=36% Similarity=0.648 Sum_probs=112.8
Q ss_pred cccccHHHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCC
Q 032794 9 RKALSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAP 87 (133)
Q Consensus 9 ~~~~~~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i 87 (133)
.....+.+.+||++|+++|+++++.||.+. .++|+++|+++|.||+||||+||.|+|+|.||++||++||+|+|.| ++
T Consensus 15 ~~~~~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T-~i 93 (166)
T 2ayv_A 15 ENLYFQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTT-KI 93 (166)
T ss_dssp ----CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS-CC
T ss_pred ccccCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeecc-CC
Confidence 344566788999999999999999999987 4679999999999999999999999999999999999999999999 59
Q ss_pred cCccccCCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 88 LHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 88 ~Hpnv~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
|||||+.+|+||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 94 ~HPNI~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~ 137 (166)
T 2ayv_A 94 YHPNINSQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDD 137 (166)
T ss_dssp CBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred cCCcCCCCCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCc
Confidence 99999999999999999999999999999999999999999875
No 9
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=9.4e-44 Score=249.88 Aligned_cols=118 Identities=31% Similarity=0.616 Sum_probs=111.7
Q ss_pred cHHHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCcc
Q 032794 13 SKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPH 91 (133)
Q Consensus 13 ~~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpn 91 (133)
++.+.+||++|+++|++++++||.+. .++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.| ++||||
T Consensus 7 ~~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-~i~HPn 85 (156)
T 2e2c_A 7 RHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTT-PCWHPN 85 (156)
T ss_dssp CCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS-CCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeC-CcccCC
Confidence 44578999999999999999999987 4579999999999999999999999999999999999999999999 599999
Q ss_pred ccCCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 92 IYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 92 v~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
|+.+|+||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 86 v~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~ 125 (156)
T 2e2c_A 86 VDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNAS 125 (156)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSS
T ss_pred CccCceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999999999999999875
No 10
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.7e-44 Score=251.45 Aligned_cols=116 Identities=34% Similarity=0.599 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCcccc
Q 032794 15 IASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIY 93 (133)
Q Consensus 15 ~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpnv~ 93 (133)
++.+||++|+++|+++++.||++. .++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.| ++|||||+
T Consensus 5 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-~i~HPnv~ 83 (154)
T 2c2v_B 5 GLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMT-KIYHPNVD 83 (154)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS-CCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeec-CcccCcCc
Confidence 456899999999999999999987 4679999999999999999999999999999999999999999999 59999999
Q ss_pred CCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 94 SNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 94 ~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
.+|+||+++|.++|+|+++|++||.+|+++|.+|++++
T Consensus 84 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~ 121 (154)
T 2c2v_B 84 KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD 121 (154)
T ss_dssp TTCBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCC
T ss_pred cCCeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999875
No 11
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=1.9e-43 Score=246.93 Aligned_cols=117 Identities=41% Similarity=0.725 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCccc
Q 032794 14 KIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHI 92 (133)
Q Consensus 14 ~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpnv 92 (133)
..+.+||++|+++|++++++||++. .++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.| ++|||||
T Consensus 3 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-~i~HPnv 81 (150)
T 1z2u_A 3 HMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTT-RIYHPNI 81 (150)
T ss_dssp CHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS-CCCBTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEec-CcccCcC
Confidence 3578999999999999999999987 4679999999999999999999999999999999999999999999 5999999
Q ss_pred cCCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 93 YSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 93 ~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
+.+|+||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~ 120 (150)
T 1z2u_A 82 NSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 120 (150)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CCCCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCC
Confidence 999999999999999999999999999999999999875
No 12
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=2.6e-43 Score=249.59 Aligned_cols=121 Identities=37% Similarity=0.663 Sum_probs=113.3
Q ss_pred ccccHHHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCc
Q 032794 10 KALSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPL 88 (133)
Q Consensus 10 ~~~~~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~ 88 (133)
+...+.+.+||++|+++|+++++.||++. .++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.| ++|
T Consensus 14 ~~~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T-~i~ 92 (165)
T 2c4o_A 14 VPRGSMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT-RIY 92 (165)
T ss_dssp --CCHHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS-CCC
T ss_pred ccCCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEec-CCc
Confidence 34466789999999999999999999987 4679999999999999999999999999999999999999999999 599
Q ss_pred CccccCCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 89 HPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 89 Hpnv~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
||||+.+|+||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 93 HPnV~~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~ 135 (165)
T 2c4o_A 93 HPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 135 (165)
T ss_dssp BTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CCcCCCCCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCc
Confidence 9999999999999999999999999999999999999999875
No 13
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-43 Score=253.72 Aligned_cols=119 Identities=34% Similarity=0.642 Sum_probs=111.6
Q ss_pred ccHHHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCc
Q 032794 12 LSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHP 90 (133)
Q Consensus 12 ~~~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hp 90 (133)
+++.+.+||++|+++|+++++.||.+. .++|+++|+++|.||+||||+||.|+|+|.||++||++||+|+|.| ++|||
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T-~i~HP 105 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLT-PCYHP 105 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESS-CCCST
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEec-CCccC
Confidence 577889999999999999999999987 5679999999999999999999999999999999999999999999 59999
Q ss_pred cccCCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 91 HIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 91 nv~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
||+.+|+||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 106 NV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~ 146 (179)
T 1i7k_A 106 NVDTQGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDS 146 (179)
T ss_dssp TBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred ccccCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999999999999999999999876
No 14
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.7e-43 Score=242.42 Aligned_cols=117 Identities=50% Similarity=1.011 Sum_probs=107.1
Q ss_pred cCcccccHHHHHHHHHHHHHHhhCCCCCcEEe---eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEe
Q 032794 7 PSRKALSKIASNRLQKELVEWQVNPPAGFKHK---VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFL 83 (133)
Q Consensus 7 ~~~~~~~~~~~~Rl~~El~~l~~~~~~~~~~~---~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 83 (133)
.....|++.+ +||++|+++|++++++|+.+. .++|+++|+++|.||+|||||||.|+++|.||++||++||+|+|.
T Consensus 15 ~~~~~Ms~~~-~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 93 (136)
T 2a7l_A 15 VPRGSMASMQ-KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFT 93 (136)
T ss_dssp CCGGGGTTSC-HHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEE
T ss_pred ccchhccHHH-HHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEe
Confidence 3445565543 999999999999999999853 467999999999999999999999999999999999999999999
Q ss_pred cCCCc--CccccCCCeeecccCCCCCCCcCCHHHHHHHHHHhhC
Q 032794 84 PPAPL--HPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 125 (133)
Q Consensus 84 tp~i~--Hpnv~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~ 125 (133)
| ++| ||||+.+|+||+++|.++|+|+++|++||.+|+++|.
T Consensus 94 T-~i~~~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 94 G-ENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp S-SCCCCBTTBCTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred C-CCcCCCccCCCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 9 588 9999999999999999999999999999999999984
No 15
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.8e-43 Score=248.37 Aligned_cols=118 Identities=34% Similarity=0.619 Sum_probs=112.1
Q ss_pred cHHHHHHHHHHHHHHhhCCCCCcEEee-CCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCcc
Q 032794 13 SKIASNRLQKELVEWQVNPPAGFKHKV-TDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPH 91 (133)
Q Consensus 13 ~~~~~~Rl~~El~~l~~~~~~~~~~~~-~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpn 91 (133)
+.++.+||++|+++|+++++.||.+.. ++|+++|+++|.||+||||+||.|+|+|.||++||++||+|+|.| ++||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t-~i~HPN 80 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLT-PIYHPN 80 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS-CCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeec-CCcccc
Confidence 356889999999999999999999874 579999999999999999999999999999999999999999999 599999
Q ss_pred ccCCCeeecccCC----CCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 92 IYSNGHICLDILY----DSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 92 v~~~G~vcl~~l~----~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
|+.+|+||+++|. ++|+|+++|.+||.+|+++|.+|++++
T Consensus 81 v~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~ 124 (169)
T 1yh2_A 81 IDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDD 124 (169)
T ss_dssp BCTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTS
T ss_pred CCcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcc
Confidence 9999999999998 899999999999999999999999875
No 16
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-43 Score=250.81 Aligned_cols=124 Identities=25% Similarity=0.562 Sum_probs=116.5
Q ss_pred cCcccccHHHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecC
Q 032794 7 PSRKALSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP 85 (133)
Q Consensus 7 ~~~~~~~~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp 85 (133)
-...+|++.+.+||++|+++|++++++||.+. .++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|
T Consensus 15 ~~~~~M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T- 93 (169)
T 1yrv_A 15 VPRGSMHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFIT- 93 (169)
T ss_dssp CCTTGGGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESS-
T ss_pred cccCccChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecC-
Confidence 34567888899999999999999999999887 4679999999999999999999999999999999999999999999
Q ss_pred CCcCccc-cCCCeeecccCC--CCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 86 APLHPHI-YSNGHICLDILY--DSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 86 ~i~Hpnv-~~~G~vcl~~l~--~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
++||||| +.+|+||+++|. ++|+|+++|++||.+|+++|.+|++++
T Consensus 94 ~i~HPNI~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~ 142 (169)
T 1yrv_A 94 IPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLEN 142 (169)
T ss_dssp CCCCTTBCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTS
T ss_pred CCccCcccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCC
Confidence 5999999 789999999998 899999999999999999999999875
No 17
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=6e-43 Score=244.12 Aligned_cols=114 Identities=41% Similarity=0.719 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCccccCC
Q 032794 17 SNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSN 95 (133)
Q Consensus 17 ~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpnv~~~ 95 (133)
.+||++|+++|+++++.||++. .++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.| ++|||||+.+
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-~i~HPnv~~~ 81 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLT-KIYHPNIDKL 81 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECS-CCCBTTBCTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEecc-CCccCCCCCC
Confidence 4799999999999999999987 5679999999999999999999999999999999999999999999 5999999999
Q ss_pred CeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 96 GHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 96 G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
|+||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 117 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDD 117 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTS
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999999999999999875
No 18
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=6.3e-43 Score=247.40 Aligned_cols=117 Identities=30% Similarity=0.617 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCCcEEee-C-CCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCcc
Q 032794 14 KIASNRLQKELVEWQVNPPAGFKHKV-T-DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPH 91 (133)
Q Consensus 14 ~~~~~Rl~~El~~l~~~~~~~~~~~~-~-~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpn 91 (133)
+++.+||++|+++|+++++.||++.. + +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.| ++||||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-~i~HPN 80 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTC-EMFHPN 80 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS-CCCCTT
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcC-CCccCC
Confidence 35789999999999999999999873 4 49999999999999999999999999999999999999999999 599999
Q ss_pred ccCCCeeecccCC-------------CCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 92 IYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 92 v~~~G~vcl~~l~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
|+.+|+||+++|. ++|+|+++|++||.+|+++|.+|++++
T Consensus 81 V~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~ 133 (164)
T 3h8k_A 81 IYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDES 133 (164)
T ss_dssp BCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSS
T ss_pred CCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCC
Confidence 9999999999997 789999999999999999999999875
No 19
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=3.1e-43 Score=246.99 Aligned_cols=115 Identities=36% Similarity=0.663 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCccccC
Q 032794 16 ASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYS 94 (133)
Q Consensus 16 ~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpnv~~ 94 (133)
+.+||++|+++|++++++||.+. .++|+++|+++|.||+||||+||.|+|+|.||++||++||+|+|.| ++|||||+.
T Consensus 6 ~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-~i~HPnv~~ 84 (155)
T 1jat_A 6 LPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLT-KIYHPNIDR 84 (155)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECS-CCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeec-ccccCCCCC
Confidence 46899999999999999999987 4679999999999999999999999999999999999999999999 599999999
Q ss_pred CCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 95 NGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 95 ~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
+|+||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 85 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 121 (155)
T 1jat_A 85 LGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPND 121 (155)
T ss_dssp TCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999999999998875
No 20
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-42 Score=245.42 Aligned_cols=118 Identities=32% Similarity=0.760 Sum_probs=110.3
Q ss_pred cHHHHHHHHHHHHHHhhCCCCCcEEee-CC-----CceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCC
Q 032794 13 SKIASNRLQKELVEWQVNPPAGFKHKV-TD-----NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPA 86 (133)
Q Consensus 13 ~~~~~~Rl~~El~~l~~~~~~~~~~~~-~~-----~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~ 86 (133)
|.+|.+||+||+++|++++++||.+.. ++ |+++|+++|.||+||||+||.|+++|.||++||++||+|+|.| +
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t-~ 86 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTP-P 86 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS-C
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeC-C
Confidence 567899999999999999999999863 33 8999999999999999999999999999999999999999999 5
Q ss_pred CcCccccCCCeeecccCCC--CCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 87 PLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 87 i~Hpnv~~~G~vcl~~l~~--~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
+|||||+.+|+||+++|.+ +|+|+++|++||.+|+++|.+|++++
T Consensus 87 i~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~ 133 (163)
T 3rcz_B 87 LFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIAS 133 (163)
T ss_dssp CCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTS
T ss_pred CccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999976 49999999999999999999999875
No 21
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=1.6e-42 Score=244.33 Aligned_cols=120 Identities=33% Similarity=0.628 Sum_probs=112.5
Q ss_pred cccHHHHHHHHHHHHHHhhC---CCCCcEEee-CCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCC
Q 032794 11 ALSKIASNRLQKELVEWQVN---PPAGFKHKV-TDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPA 86 (133)
Q Consensus 11 ~~~~~~~~Rl~~El~~l~~~---~~~~~~~~~-~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~ 86 (133)
+|++.+.+||++|+++|+++ ++.|+.+.. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.| +
T Consensus 4 ~Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-~ 82 (159)
T 2bep_A 4 AMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFIT-K 82 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS-C
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeC-C
Confidence 57778999999999999985 578999874 679999999999999999999999999999999999999999999 5
Q ss_pred CcCccccC-CCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 87 PLHPHIYS-NGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 87 i~Hpnv~~-~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
+|||||+. +|+||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 83 i~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 128 (159)
T 2bep_A 83 IWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDD 128 (159)
T ss_dssp CCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CCccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCC
Confidence 99999994 9999999999999999999999999999999999875
No 22
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=9.4e-43 Score=245.01 Aligned_cols=119 Identities=33% Similarity=0.722 Sum_probs=110.1
Q ss_pred ccHHHHHHHHHHHHHHhhCCCCCcEEee-C-----CCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecC
Q 032794 12 LSKIASNRLQKELVEWQVNPPAGFKHKV-T-----DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP 85 (133)
Q Consensus 12 ~~~~~~~Rl~~El~~l~~~~~~~~~~~~-~-----~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp 85 (133)
|++.+.+||++|+++|++++++|+.+.+ + +|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t- 79 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPA- 79 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCT-
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccC-
Confidence 3456889999999999999999998863 2 38999999999999999999999999999999999999999999
Q ss_pred CCcCccccCCCeeecccCCC--CCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 86 APLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 86 ~i~Hpnv~~~G~vcl~~l~~--~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
++|||||+.+|+||+++|.+ +|+|+++|++||.+|+++|.+|++++
T Consensus 80 ~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 127 (157)
T 2gjd_A 80 GFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNS 127 (157)
T ss_dssp TCCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTC
T ss_pred CCccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCC
Confidence 69999999999999999987 79999999999999999999998875
No 23
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=1.3e-42 Score=247.47 Aligned_cols=120 Identities=33% Similarity=0.695 Sum_probs=109.2
Q ss_pred cccHHHHHHHHHHHHHHhhCCCCCcEEee-C-CCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCc
Q 032794 11 ALSKIASNRLQKELVEWQVNPPAGFKHKV-T-DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPL 88 (133)
Q Consensus 11 ~~~~~~~~Rl~~El~~l~~~~~~~~~~~~-~-~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~ 88 (133)
..++.+.+||+||+++|+++++.||++.. + +|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.| ++|
T Consensus 13 ~~~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T-~i~ 91 (172)
T 2awf_A 13 GLVPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFIT-EIW 91 (172)
T ss_dssp CCCCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS-CCC
T ss_pred CChHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccC-CCc
Confidence 34667899999999999999999999874 3 69999999999999999999999999999999999999999999 589
Q ss_pred CccccCCCeeecccCC-------------CCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 89 HPHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 89 Hpnv~~~G~vcl~~l~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
||||+.+|+||+++|. ++|+|+++|++||.+|+++|.+|++++
T Consensus 92 HPNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~ 147 (172)
T 2awf_A 92 HPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDS 147 (172)
T ss_dssp CTTBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC----
T ss_pred cCCCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCC
Confidence 9999999999999996 689999999999999999999998765
No 24
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=1.8e-42 Score=248.96 Aligned_cols=119 Identities=31% Similarity=0.639 Sum_probs=110.8
Q ss_pred ccHHHHHHHHHHHHHHhhCCCCCcEEe-e-CCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcC
Q 032794 12 LSKIASNRLQKELVEWQVNPPAGFKHK-V-TDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLH 89 (133)
Q Consensus 12 ~~~~~~~Rl~~El~~l~~~~~~~~~~~-~-~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~H 89 (133)
.++++.+||++||++|+++++.||++. . ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.| .+||
T Consensus 4 ~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-~i~H 82 (183)
T 3rz3_A 4 GSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLT-KMWH 82 (183)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS-CCCC
T ss_pred cchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecC-CCcc
Confidence 345689999999999999999999987 4 569999999999999999999999999999999999999999999 5999
Q ss_pred ccccCCCeeecccCC-------------CCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 90 PHIYSNGHICLDILY-------------DSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 90 pnv~~~G~vcl~~l~-------------~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
|||+.+|+||+++|. ++|+|+++|++||++|+++|.+|++++
T Consensus 83 PnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~ 137 (183)
T 3rz3_A 83 PNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFS 137 (183)
T ss_dssp TTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSS
T ss_pred CCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCC
Confidence 999999999999996 789999999999999999999999875
No 25
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=2.3e-42 Score=250.24 Aligned_cols=117 Identities=38% Similarity=0.695 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCccc
Q 032794 14 KIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHI 92 (133)
Q Consensus 14 ~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpnv 92 (133)
+.+.+||++||++|++++++||.+. .++|+++|+++|.||+||||+||.|+|+|.||++||++||+|+|.| ++|||||
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T-~i~HPNV 125 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRT-RIYHCNI 125 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS-CCCBTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccC-CCccceE
Confidence 6688999999999999999999987 4679999999999999999999999999999999999999999999 5999999
Q ss_pred cCCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 93 YSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 93 ~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 126 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~ 164 (194)
T 3bzh_A 126 NSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPAD 164 (194)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CCCCceechhhhccCCCcCcHHHHHHHHHHHHhCCCCcc
Confidence 999999999999999999999999999999999998875
No 26
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=7.4e-43 Score=243.64 Aligned_cols=115 Identities=31% Similarity=0.596 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHhhCCCCCcEEee-CC-CceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCcccc
Q 032794 16 ASNRLQKELVEWQVNPPAGFKHKV-TD-NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIY 93 (133)
Q Consensus 16 ~~~Rl~~El~~l~~~~~~~~~~~~-~~-~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpnv~ 93 (133)
+.+||++|+++|+++++.||++.. ++ |+++|+++|.||+||||+||.|+++|.||++||++||+|+|.| ++|||||+
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-~i~HPni~ 80 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDT-KVYHPNIS 80 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESS-CCCBTTBC
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeC-CCccCCCc
Confidence 468999999999999999999874 44 8999999999999999999999999999999999999999999 69999999
Q ss_pred C-CCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 94 S-NGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 94 ~-~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
. +|+||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 81 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 119 (149)
T 1fxt_A 81 SVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPND 119 (149)
T ss_dssp SSSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSS
T ss_pred CCCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCC
Confidence 8 9999999999999999999999999999999999875
No 27
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=2.9e-42 Score=243.44 Aligned_cols=120 Identities=33% Similarity=0.687 Sum_probs=111.9
Q ss_pred cccHHHHHHHHHHHHHHhhCCCCCcEEee------CCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec
Q 032794 11 ALSKIASNRLQKELVEWQVNPPAGFKHKV------TDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLP 84 (133)
Q Consensus 11 ~~~~~~~~Rl~~El~~l~~~~~~~~~~~~------~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 84 (133)
+|++.+.+||++|+++|++++++|+.+.. ++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|
T Consensus 3 ~M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 82 (161)
T 2grr_A 3 HMSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEP 82 (161)
T ss_dssp -CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEec
Confidence 46778999999999999999999998763 258999999999999999999999999999999999999999999
Q ss_pred CCCcCccccCCCeeecccCCC--CCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 85 PAPLHPHIYSNGHICLDILYD--SWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 85 p~i~Hpnv~~~G~vcl~~l~~--~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
++|||||+.+|+||+++|.+ +|+|+++|.+||.+|+++|.+|++++
T Consensus 83 -~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 130 (161)
T 2grr_A 83 -PLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQS 130 (161)
T ss_dssp -CCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred -CcccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCC
Confidence 59999999999999999986 89999999999999999999998875
No 28
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-42 Score=249.87 Aligned_cols=121 Identities=33% Similarity=0.571 Sum_probs=107.6
Q ss_pred ccccHHHHHHHHHHHHHHhhCCC-------------CCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCC
Q 032794 10 KALSKIASNRLQKELVEWQVNPP-------------AGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPM 75 (133)
Q Consensus 10 ~~~~~~~~~Rl~~El~~l~~~~~-------------~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 75 (133)
...+..+.+||++|+++|+++++ .||.+. .++|+++|+++|.||+||||+||.|+|+|.||++||+
T Consensus 27 ~~~~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~ 106 (193)
T 2f4z_A 27 PRGTPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPY 106 (193)
T ss_dssp -----CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCC
Confidence 33455678999999999999876 789887 4678999999999999999999999999999999999
Q ss_pred CCCeEEEecCCCcCcccc-CCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 76 EAPQVIFLPPAPLHPHIY-SNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 76 ~pP~v~f~tp~i~Hpnv~-~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
+||+|+|.| +||||||+ .+|+||+++|.++|+|+++|++||++|+++|.+|++++
T Consensus 107 ~PP~V~F~T-~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~ 162 (193)
T 2f4z_A 107 NPPKMKFVT-KIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTD 162 (193)
T ss_dssp SCCEEEESS-CCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTS
T ss_pred CCCeEEEec-CCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCC
Confidence 999999999 59999999 59999999999999999999999999999999999875
No 29
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.6e-42 Score=254.52 Aligned_cols=120 Identities=31% Similarity=0.566 Sum_probs=113.1
Q ss_pred cccHHHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcC
Q 032794 11 ALSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLH 89 (133)
Q Consensus 11 ~~~~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~H 89 (133)
.+.+.+.+||++|+++|+++++.||.+. .++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.| +|||
T Consensus 19 ~~~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T-~i~H 97 (216)
T 2pwq_A 19 FQGSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVT-KIWH 97 (216)
T ss_dssp CCSCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS-CCCB
T ss_pred cccCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccC-CCcC
Confidence 3456789999999999999999999987 4679999999999999999999999999999999999999999999 6999
Q ss_pred cccc-CCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 90 PHIY-SNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 90 pnv~-~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
|||+ .+|+||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 98 PNI~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~d 140 (216)
T 2pwq_A 98 PNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDD 140 (216)
T ss_dssp TTBCTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CCCcCCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCC
Confidence 9999 59999999999999999999999999999999999875
No 30
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=6e-42 Score=249.44 Aligned_cols=119 Identities=34% Similarity=0.631 Sum_probs=110.0
Q ss_pred ccHHHHHHHHHHHHHHhhC---CCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCC
Q 032794 12 LSKIASNRLQKELVEWQVN---PPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAP 87 (133)
Q Consensus 12 ~~~~~~~Rl~~El~~l~~~---~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i 87 (133)
|++.+.+||++|+++|+++ ++.|+.+. .++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.| ++
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t-~i 80 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFIT-KI 80 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS-CC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCcccccc-Cc
Confidence 4556789999999999987 36799887 4679999999999999999999999999999999999999999999 69
Q ss_pred cCccccC-CCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 88 LHPHIYS-NGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 88 ~Hpnv~~-~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
|||||+. +|+||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 81 ~HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~ 125 (201)
T 3k9o_A 81 WHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDD 125 (201)
T ss_dssp CBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred ccCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCC
Confidence 9999995 9999999999999999999999999999999999876
No 31
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=1.6e-41 Score=240.91 Aligned_cols=123 Identities=24% Similarity=0.464 Sum_probs=112.1
Q ss_pred cCcccccHHHHHHHHHHHHHHhhCCCCCcEEe-e-CCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec
Q 032794 7 PSRKALSKIASNRLQKELVEWQVNPPAGFKHK-V-TDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLP 84 (133)
Q Consensus 7 ~~~~~~~~~~~~Rl~~El~~l~~~~~~~~~~~-~-~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 84 (133)
+......+.+.+||++|+++|+++++.||.+. . ++|++.|.++| ||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 6 ~~~~~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 84 (167)
T 3fn1_B 6 SDSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLT 84 (167)
T ss_dssp --CCCCCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECS
T ss_pred CCCccchhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecC
Confidence 34556678899999999999999999999987 3 56899999998 899999999999999999999999999999999
Q ss_pred CCCcCccccCCCeeecccCCC------CCCCcCCHHHHHHHHHHhhCC-CCcCC
Q 032794 85 PAPLHPHIYSNGHICLDILYD------SWSPAMTVSSVCISILSMLSS-STVKV 131 (133)
Q Consensus 85 p~i~Hpnv~~~G~vcl~~l~~------~W~p~~~i~~vl~~i~~ll~~-p~~~~ 131 (133)
++|||||+.+|+||+++|.. +|+|+++|.+||.+|+++|.+ |++++
T Consensus 85 -~i~HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~ 137 (167)
T 3fn1_B 85 -KIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDD 137 (167)
T ss_dssp -CCCCSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSS
T ss_pred -CcccCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCc
Confidence 59999999999999999975 799999999999999999999 57765
No 32
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=2.6e-41 Score=253.00 Aligned_cols=123 Identities=33% Similarity=0.608 Sum_probs=114.0
Q ss_pred CcccccHHHHHHHHHHHHHHhhC---CCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEe
Q 032794 8 SRKALSKIASNRLQKELVEWQVN---PPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFL 83 (133)
Q Consensus 8 ~~~~~~~~~~~Rl~~El~~l~~~---~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 83 (133)
++.+|++.+.+||++||++|+++ ++.||.+. .++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.
T Consensus 50 s~~~Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~ 129 (253)
T 3e46_A 50 SEFDMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFI 129 (253)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred ccccccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeec
Confidence 34677889999999999999987 46799887 467999999999999999999999999999999999999999999
Q ss_pred cCCCcCccccC-CCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 84 PPAPLHPHIYS-NGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 84 tp~i~Hpnv~~-~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
| +||||||+. +|+||+++|.++|+|+++|++||.+|+++|.+|++++
T Consensus 130 T-~i~HPNV~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~ 177 (253)
T 3e46_A 130 T-KIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDD 177 (253)
T ss_dssp S-CCCBTTBCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred C-CCccCCccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCC
Confidence 9 699999995 9999999999999999999999999999999999876
No 33
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=2.4e-41 Score=237.38 Aligned_cols=115 Identities=27% Similarity=0.564 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHhhCCCCCcEE-e-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCccc
Q 032794 15 IASNRLQKELVEWQVNPPAGFKH-K-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHI 92 (133)
Q Consensus 15 ~~~~Rl~~El~~l~~~~~~~~~~-~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpnv 92 (133)
++.+||++|+++|+++++.||.+ . .++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.| ++|||||
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-~i~HPnV 81 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTT-KIYHPNV 81 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESS-CCCBTTB
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeC-CCccCcC
Confidence 46799999999999999999998 4 4679999999999 99999999999999999999999999999999 5999999
Q ss_pred cCCCeeecccC-CCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 93 YSNGHICLDIL-YDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 93 ~~~G~vcl~~l-~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
+.+|+||+++| .++|+|+++|.+||.+|+++|.+|++++
T Consensus 82 ~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 121 (155)
T 1wzv_A 82 DENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIRE 121 (155)
T ss_dssp CTTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSS
T ss_pred CCCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCc
Confidence 99999999999 8999999999999999999999999875
No 34
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=9.7e-41 Score=235.08 Aligned_cols=119 Identities=23% Similarity=0.385 Sum_probs=107.6
Q ss_pred ccHHHHHHHHHHHHHHhhCCCCC-cEEee--CCC--ceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCC
Q 032794 12 LSKIASNRLQKELVEWQVNPPAG-FKHKV--TDN--LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPA 86 (133)
Q Consensus 12 ~~~~~~~Rl~~El~~l~~~~~~~-~~~~~--~~~--~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~ 86 (133)
+...+.+||+||+++|++++++| +++.. ++| +++|+++|.||++||||||.|+++|.||++||++||+|+|.| +
T Consensus 22 v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T-~ 100 (160)
T 2a4d_A 22 VKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVT-K 100 (160)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESB-C
T ss_pred eechHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEec-C
Confidence 34678999999999999998888 66653 344 899999999999999999999999999999999999999999 5
Q ss_pred CcCcccc-CCCeeecccCC--CCCCCcCCHHHHHHHHHHhhC-CCCcCC
Q 032794 87 PLHPHIY-SNGHICLDILY--DSWSPAMTVSSVCISILSMLS-SSTVKV 131 (133)
Q Consensus 87 i~Hpnv~-~~G~vcl~~l~--~~W~p~~~i~~vl~~i~~ll~-~p~~~~ 131 (133)
+|||||+ .+|+||+++|. ++|+|+++|++||.+|+++|. +|+.++
T Consensus 101 i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~ 149 (160)
T 2a4d_A 101 INMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKL 149 (160)
T ss_dssp CCCTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTC
T ss_pred ceeCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCC
Confidence 9999999 69999999998 899999999999999999995 566654
No 35
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=7.6e-41 Score=238.39 Aligned_cols=121 Identities=24% Similarity=0.493 Sum_probs=107.6
Q ss_pred cccHHHHHHHHHHHHHHhh-C-C------CC---CcEEe--eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCC
Q 032794 11 ALSKIASNRLQKELVEWQV-N-P------PA---GFKHK--VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEA 77 (133)
Q Consensus 11 ~~~~~~~~Rl~~El~~l~~-~-~------~~---~~~~~--~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~p 77 (133)
+|++.+.+||++|+++|++ . + +. ++.+. .++|+++|+++|.||++|||+||.|+|+|.||++||++|
T Consensus 2 ~Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~P 81 (172)
T 2y9m_A 2 AMADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNP 81 (172)
T ss_dssp --CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSC
T ss_pred CCcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCC
Confidence 4678899999999999998 4 3 22 34444 357999999999999999999999999999999999999
Q ss_pred CeEEEecCCCcCcccc-CCCeeecccCC-CCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 78 PQVIFLPPAPLHPHIY-SNGHICLDILY-DSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 78 P~v~f~tp~i~Hpnv~-~~G~vcl~~l~-~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
|+|+|.|+++|||||+ .+|+||+++|. ++|+|+++|++||.+|+++|.+|++++
T Consensus 82 P~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~ 137 (172)
T 2y9m_A 82 PKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDS 137 (172)
T ss_dssp CEEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CEEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCC
Confidence 9999999448999995 79999999998 899999999999999999999999875
No 36
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.7e-41 Score=242.20 Aligned_cols=124 Identities=25% Similarity=0.510 Sum_probs=101.8
Q ss_pred CCCCCCcCcccccHHHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCe
Q 032794 1 MTSSSAPSRKALSKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQ 79 (133)
Q Consensus 1 m~~s~~~~~~~~~~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~ 79 (133)
|+|++ +.+.++.+.+||++|+++|++++++||.+. .++|+++|+++|.||+||||+||.|+++|.||++||++||+
T Consensus 3 mss~~---~~~~~~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~ 79 (187)
T 2f4w_A 3 MSSTS---SKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPS 79 (187)
T ss_dssp --------------CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCE
T ss_pred CCccC---CCCCccHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCc
Confidence 76665 346678899999999999999999999987 46799999999999999999999999999999999999999
Q ss_pred EEEecCCCcCccccCCCeeecccC---CCCCCCcCCHHHHHHHHHHhhCCCCcC
Q 032794 80 VIFLPPAPLHPHIYSNGHICLDIL---YDSWSPAMTVSSVCISILSMLSSSTVK 130 (133)
Q Consensus 80 v~f~tp~i~Hpnv~~~G~vcl~~l---~~~W~p~~~i~~vl~~i~~ll~~p~~~ 130 (133)
|+|.|| ||||+.+|+||+++| .++|+|+++|.+||.+|+++|.+|+++
T Consensus 80 v~f~T~---~~~~~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~ 130 (187)
T 2f4w_A 80 IYMITP---NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPT 130 (187)
T ss_dssp EEECSC---CSSBCTTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCC
T ss_pred ccccCC---CceeccCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCC
Confidence 999994 999999999999999 689999999999999999999999885
No 37
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=5.5e-42 Score=251.55 Aligned_cols=115 Identities=31% Similarity=0.597 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHhhCCCCCcEEee-CC-CceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCcccc
Q 032794 16 ASNRLQKELVEWQVNPPAGFKHKV-TD-NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIY 93 (133)
Q Consensus 16 ~~~Rl~~El~~l~~~~~~~~~~~~-~~-~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpnv~ 93 (133)
+.+||++|+++|++++++||++.. ++ ++++|+++|.||++|||+||.|+++|.||++||++||+|+|.| ++|||||+
T Consensus 3 a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T-~i~HPNI~ 81 (215)
T 1tte_A 3 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDT-KVYHPNIS 81 (215)
T ss_dssp THHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETT-TCCCSSSC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccC-CCccCcCc
Confidence 578999999999999999999874 44 5679999999999999999999999999999999999999999 69999999
Q ss_pred C-CCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 94 S-NGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 94 ~-~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
. +|+||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~ 120 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPND 120 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSS
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCC
Confidence 8 9999999999999999999999999999999999875
No 38
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.3e-41 Score=236.35 Aligned_cols=115 Identities=23% Similarity=0.459 Sum_probs=107.3
Q ss_pred cHHHHHHHHHHHHHHhhCCCCCcEEe--eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCc
Q 032794 13 SKIASNRLQKELVEWQVNPPAGFKHK--VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHP 90 (133)
Q Consensus 13 ~~~~~~Rl~~El~~l~~~~~~~~~~~--~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hp 90 (133)
.+.+.+||++|+++| ++++|+++. .++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.| ++|||
T Consensus 4 ~~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-~i~HP 79 (160)
T 1y8x_A 4 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCET-MVYHP 79 (160)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECS-CCCBT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEec-CCccC
Confidence 346889999999999 567899886 357999999988 999999999999999999999999999999999 59999
Q ss_pred cccCCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 91 HIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 91 nv~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
||+.+|+||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 80 nv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~ 120 (160)
T 1y8x_A 80 NIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPED 120 (160)
T ss_dssp TBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSS
T ss_pred cCCCCCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999875
No 39
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.2e-41 Score=240.29 Aligned_cols=118 Identities=22% Similarity=0.410 Sum_probs=110.1
Q ss_pred ccccHHHHHHHHHHHHHHhhCCCCCcEEe--eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCC
Q 032794 10 KALSKIASNRLQKELVEWQVNPPAGFKHK--VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAP 87 (133)
Q Consensus 10 ~~~~~~~~~Rl~~El~~l~~~~~~~~~~~--~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i 87 (133)
...++.+.+||++|+++| ++++|+++. .++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.| ++
T Consensus 21 ~~~~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t-~i 96 (180)
T 2nvu_C 21 SKKASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCET-MV 96 (180)
T ss_dssp CCSCCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECS-CC
T ss_pred cCCccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceec-cC
Confidence 455778899999999999 567899886 367999999988 999999999999999999999999999999999 59
Q ss_pred cCccccCCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 88 LHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 88 ~Hpnv~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
|||||+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++
T Consensus 97 ~HPNV~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~ 140 (180)
T 2nvu_C 97 YHPNIDLEGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPED 140 (180)
T ss_dssp CBTTBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred ccCCCCCCCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999875
No 40
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=7.5e-41 Score=234.95 Aligned_cols=119 Identities=27% Similarity=0.389 Sum_probs=108.7
Q ss_pred cccHHHHHHHHHHHHHHhhC-CCCCcEEee--CC--CceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecC
Q 032794 11 ALSKIASNRLQKELVEWQVN-PPAGFKHKV--TD--NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP 85 (133)
Q Consensus 11 ~~~~~~~~Rl~~El~~l~~~-~~~~~~~~~--~~--~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp 85 (133)
.....+.+||++|+++|+++ ++.|+++.. ++ |+++|+++|.||++||||||.|+++|.||++||++||+|+|.|
T Consensus 17 ~~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t- 95 (156)
T 2q0v_A 17 QGIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDT- 95 (156)
T ss_dssp SSCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESB-
T ss_pred cccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEc-
Confidence 34556789999999999998 788998764 23 5999999999999999999999999999999999999999999
Q ss_pred CCcCccccCCCee---ecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 86 APLHPHIYSNGHI---CLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 86 ~i~Hpnv~~~G~v---cl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
++|||||+.+|+| |+++|. +|+|+++|++||.+|+++|.+|++++
T Consensus 96 ~i~HPNV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~ 143 (156)
T 2q0v_A 96 KIEMSCVDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKR 143 (156)
T ss_dssp CCCCTTBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTT
T ss_pred ccccCCCccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCC
Confidence 5999999999999 899887 49999999999999999999998875
No 41
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=1e-40 Score=230.20 Aligned_cols=115 Identities=21% Similarity=0.392 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHhhC-CCCCcEEee--CC--CceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcC
Q 032794 15 IASNRLQKELVEWQVN-PPAGFKHKV--TD--NLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLH 89 (133)
Q Consensus 15 ~~~~Rl~~El~~l~~~-~~~~~~~~~--~~--~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~H 89 (133)
.+.+||++|+++++++ ++.|+++.. ++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.| ++||
T Consensus 6 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-~i~H 84 (138)
T 1jat_B 6 PRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFIS-KINL 84 (138)
T ss_dssp CHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESB-CCCC
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEc-cccc
Confidence 4678999999999998 788998764 23 4899999999999999999999999999999999999999999 6999
Q ss_pred ccccCC-Cee--ecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 90 PHIYSN-GHI--CLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 90 pnv~~~-G~v--cl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
|||+.+ |+| |+++|. +|+|+++|++||.+|+++|.+|++++
T Consensus 85 Pnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~ 128 (138)
T 1jat_B 85 PCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKK 128 (138)
T ss_dssp TTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHT
T ss_pred CCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCC
Confidence 999985 999 999886 79999999999999999999987754
No 42
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=1.4e-40 Score=233.27 Aligned_cols=114 Identities=27% Similarity=0.564 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHhhCCCCCcEEe--eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCcccc
Q 032794 16 ASNRLQKELVEWQVNPPAGFKHK--VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIY 93 (133)
Q Consensus 16 ~~~Rl~~El~~l~~~~~~~~~~~--~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpnv~ 93 (133)
+.+||++|+++|++++++|+.+. .++|+++|+++|. |+||||+||.|+++|.||++||++||+|+|.| ++|||||+
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t-~i~HPnv~ 80 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKT-KIYHPNID 80 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESS-CCCCTTBC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeC-CCccccCC
Confidence 56799999999999999999854 4579999999998 99999999999999999999999999999999 59999999
Q ss_pred CCCeeecccCC-CCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 94 SNGHICLDILY-DSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 94 ~~G~vcl~~l~-~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
.+|+||+++|. ++|+|+++|.+||.+|+++|.+|++++
T Consensus 81 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 119 (154)
T 1c4z_D 81 EKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEH 119 (154)
T ss_dssp TTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSS
T ss_pred CCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCc
Confidence 99999999996 799999999999999999999999875
No 43
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=234.26 Aligned_cols=118 Identities=24% Similarity=0.389 Sum_probs=106.3
Q ss_pred cHHHHHHHHHHHHHHhhCCCCC-cEEee--CCC--ceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCC
Q 032794 13 SKIASNRLQKELVEWQVNPPAG-FKHKV--TDN--LQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAP 87 (133)
Q Consensus 13 ~~~~~~Rl~~El~~l~~~~~~~-~~~~~--~~~--~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i 87 (133)
...+.+||++|+++|++++++| +++.. ++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.| ++
T Consensus 33 ~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T-~i 111 (170)
T 2hlw_A 33 KVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVT-KI 111 (170)
T ss_dssp CCCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECB-CC
T ss_pred cCHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEec-cc
Confidence 3457899999999999998888 56653 344 899999999999999999999999999999999999999999 59
Q ss_pred cCcccc-CCCeeecccCC--CCCCCcCCHHHHHHHHHHhhCC-CCcCC
Q 032794 88 LHPHIY-SNGHICLDILY--DSWSPAMTVSSVCISILSMLSS-STVKV 131 (133)
Q Consensus 88 ~Hpnv~-~~G~vcl~~l~--~~W~p~~~i~~vl~~i~~ll~~-p~~~~ 131 (133)
|||||+ .+|+||+++|. ++|+|+++|++||.+|+++|.+ |+.++
T Consensus 112 ~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~ 159 (170)
T 2hlw_A 112 NMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKL 159 (170)
T ss_dssp CCSSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSS
T ss_pred ccCCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCC
Confidence 999999 79999999998 8999999999999999999975 66553
No 44
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.7e-41 Score=239.12 Aligned_cols=113 Identities=20% Similarity=0.549 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHhhCCCCCcEEeeCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCccccC
Q 032794 15 IASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYS 94 (133)
Q Consensus 15 ~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpnv~~ 94 (133)
++.+||++|+++|++ .|+++...+|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.| ++|||||+.
T Consensus 25 ~a~~RL~kEl~~l~~---~g~~v~~~ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t-~i~HPNV~~ 100 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE---SKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMN-KIFHPNIDE 100 (179)
T ss_dssp HHHHHHHHHHHHHHH---SSSCEEEEEETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS-CCCBTTBCT
T ss_pred HHHHHHHHHHHhcCc---CCCEEEECCCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEec-CCccCcCCC
Confidence 588999999999985 4777765578999999999999999999999999999999999999999999 699999998
Q ss_pred -CCeeecccCCCCCCCcCCHHHHHHH-HHHhhCCCCcCC
Q 032794 95 -NGHICLDILYDSWSPAMTVSSVCIS-ILSMLSSSTVKV 131 (133)
Q Consensus 95 -~G~vcl~~l~~~W~p~~~i~~vl~~-i~~ll~~p~~~~ 131 (133)
+|+||+++|.++|+|+++|++||.+ |+++|.+|++++
T Consensus 101 ~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~ 139 (179)
T 2z5d_A 101 ASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPID 139 (179)
T ss_dssp TTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSS
T ss_pred CCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999 999999999875
No 45
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=1e-40 Score=233.45 Aligned_cols=112 Identities=22% Similarity=0.537 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCccccC
Q 032794 16 ASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYS 94 (133)
Q Consensus 16 ~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpnv~~ 94 (133)
+.+||++|+++|++. |+.+. .++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.| ++|||||+.
T Consensus 3 a~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t-~i~HPni~~ 78 (152)
T 2onu_A 3 SLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMN-KLLHPNVDE 78 (152)
T ss_dssp CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS-CCCCTTBCT
T ss_pred HHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEec-CCccCcCcC
Confidence 457999999999874 67765 5679999999999999999999999999999999999999999999 599999995
Q ss_pred -CCeeecccCCCCCCCcCCHHHHHHH-HHHhhCCCCcCC
Q 032794 95 -NGHICLDILYDSWSPAMTVSSVCIS-ILSMLSSSTVKV 131 (133)
Q Consensus 95 -~G~vcl~~l~~~W~p~~~i~~vl~~-i~~ll~~p~~~~ 131 (133)
+|+||+++|.++|+|+++|.+||.+ |++||.+|++++
T Consensus 79 ~~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~ 117 (152)
T 2onu_A 79 ASGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSD 117 (152)
T ss_dssp TTCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSS
T ss_pred cCCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999 689999999875
No 46
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=3.4e-40 Score=234.75 Aligned_cols=113 Identities=22% Similarity=0.497 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHHhhCCCCCcEEeeCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCccccC
Q 032794 15 IASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYS 94 (133)
Q Consensus 15 ~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpnv~~ 94 (133)
++.+||++|+++|++++. ++ ..++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.| ++|||||+.
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v--~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t-~i~HPNi~~ 87 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV--YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCN-RILHPNVDE 87 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE--EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS-CCCBTTBCT
T ss_pred cHHHHHHHHHHHHHhCCC-CC--CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeec-CcccccCcc
Confidence 567999999999999873 33 46789999999999999999999999999999999999999999999 699999994
Q ss_pred -CCeeecccCCCCCCCcCCHHHHHHHH-HHhhCCCCcCC
Q 032794 95 -NGHICLDILYDSWSPAMTVSSVCISI-LSMLSSSTVKV 131 (133)
Q Consensus 95 -~G~vcl~~l~~~W~p~~~i~~vl~~i-~~ll~~p~~~~ 131 (133)
+|+||+++|.++|+|+++|++||.+| ++||.+|++++
T Consensus 88 ~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~ 126 (171)
T 1yf9_A 88 RSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSD 126 (171)
T ss_dssp TTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSC
T ss_pred cCCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999997 79999998875
No 47
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=1.8e-39 Score=234.41 Aligned_cols=120 Identities=25% Similarity=0.464 Sum_probs=109.8
Q ss_pred cccccHHHHHHHHHHHHHHhhCCCCCcEEe-----eCCCce---eEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeE
Q 032794 9 RKALSKIASNRLQKELVEWQVNPPAGFKHK-----VTDNLQ---RWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQV 80 (133)
Q Consensus 9 ~~~~~~~~~~Rl~~El~~l~~~~~~~~~~~-----~~~~~~---~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v 80 (133)
.....+++.+||++||++|+ +++|+++. .++|++ +|+++|. |++|||+||.|+++|.||++||++||+|
T Consensus 23 ~~~~~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v 99 (190)
T 3o2u_A 23 IQPNLSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKV 99 (190)
T ss_dssp SSCCCCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEE
T ss_pred CCCCccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCcee
Confidence 34556778999999999999 67788875 357999 9999997 7889999999999999999999999999
Q ss_pred EEecCCCcCccccCCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCCC
Q 032794 81 IFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKVC 132 (133)
Q Consensus 81 ~f~tp~i~Hpnv~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~~ 132 (133)
+|.| ++|||||+.+|+||+++|.++|+|+++|++||.+|+++|.+|++++-
T Consensus 100 ~f~t-~i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p 150 (190)
T 3o2u_A 100 VCLK-KIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDP 150 (190)
T ss_dssp EECS-CCCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSC
T ss_pred EEec-CcccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcc
Confidence 9999 59999999999999999999999999999999999999999998763
No 48
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=4.2e-40 Score=236.99 Aligned_cols=126 Identities=25% Similarity=0.473 Sum_probs=112.6
Q ss_pred cCcccccHHHHHHHHHHHHHHhhCC---CCCcEEe-eCCCceeEEEEEECC-CCCCCCC-----------CEEEEEEEcC
Q 032794 7 PSRKALSKIASNRLQKELVEWQVNP---PAGFKHK-VTDNLQRWIIEVNGA-PGTLYAN-----------ETFELQVDFP 70 (133)
Q Consensus 7 ~~~~~~~~~~~~Rl~~El~~l~~~~---~~~~~~~-~~~~~~~w~~~i~gp-~~tpy~g-----------g~f~~~i~fp 70 (133)
..+..++.++.+||++||++|++++ +.++++. .++|+++|+++|.|| ++|||+| |.|+|+|.||
T Consensus 19 ~g~~~~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp 98 (186)
T 1zuo_A 19 SGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFK 98 (186)
T ss_dssp -----CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred CCcccccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECC
Confidence 3456778899999999999999987 6788887 568999999999997 9999998 8999999999
Q ss_pred CCCCCCCCeEEEecCCCcCc-cccCCCeeecccCC-CCCCCcCCHHHHHHHHHHhhCCCCcCCCC
Q 032794 71 EHYPMEAPQVIFLPPAPLHP-HIYSNGHICLDILY-DSWSPAMTVSSVCISILSMLSSSTVKVCF 133 (133)
Q Consensus 71 ~~YP~~pP~v~f~tp~i~Hp-nv~~~G~vcl~~l~-~~W~p~~~i~~vl~~i~~ll~~p~~~~~~ 133 (133)
++||++||+|+|.|| +||| ||+.+|+||+++|. ++|+|+++|++||.+|+++|.+|+++.+|
T Consensus 99 ~~YP~~PP~V~f~tp-i~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~~~ 162 (186)
T 1zuo_A 99 DNFPFDPPFVRVVLP-VLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQF 162 (186)
T ss_dssp TTTTSSCCEEEEEES-CEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEECT
T ss_pred CCCCCCCCeEEEeCC-ccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhHhh
Confidence 999999999999995 8999 69999999999997 78999999999999999999999887654
No 49
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=7.5e-39 Score=253.46 Aligned_cols=117 Identities=38% Similarity=0.661 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCccc
Q 032794 14 KIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHI 92 (133)
Q Consensus 14 ~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpnv 92 (133)
+.+.+||++|+++|++++++|+++. .++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.| ++|||||
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t-~i~HPnv 80 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT-RIYHPNI 80 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESS-CCCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeec-ccccccc
Confidence 4689999999999999999999987 5679999999999999999999999999999999999999999999 5999999
Q ss_pred cCCCeeecccCCCCCCCcCCHHHHHHHHHHhhCCCCcCC
Q 032794 93 YSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 93 ~~~G~vcl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
+.+|+||+++|.++|+|+++|++||.+|+++|.+|++++
T Consensus 81 ~~~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~ 119 (399)
T 4ddg_A 81 NSNGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDD 119 (399)
T ss_dssp CTTCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTS
T ss_pred CCCCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999999999999999999875
No 50
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=3e-39 Score=229.20 Aligned_cols=120 Identities=26% Similarity=0.476 Sum_probs=105.8
Q ss_pred cccHHHHHHHHHHHHHHhhCC------------CCCcEEe-eCCCceeEEEEEECCCCCCCC--CCEEEEEEEcCCCCCC
Q 032794 11 ALSKIASNRLQKELVEWQVNP------------PAGFKHK-VTDNLQRWIIEVNGAPGTLYA--NETFELQVDFPEHYPM 75 (133)
Q Consensus 11 ~~~~~~~~Rl~~El~~l~~~~------------~~~~~~~-~~~~~~~w~~~i~gp~~tpy~--gg~f~~~i~fp~~YP~ 75 (133)
.|++.+.+||++|+++|++++ ..++.+. .++|+++|+++|.||++|||+ ||.|+++|.||++||+
T Consensus 4 ~Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~ 83 (167)
T 4ds2_A 4 SMKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPH 83 (167)
T ss_dssp -CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTT
T ss_pred cccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCC
Confidence 455567899999999999976 6678776 568999999999999999999 9999999999999999
Q ss_pred CCCeEEEecCCCcCccccCCCeeecccCCCCCCCcCCHHHHHH-HHHHhhCC--CCcCC
Q 032794 76 EAPQVIFLPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCI-SILSMLSS--STVKV 131 (133)
Q Consensus 76 ~pP~v~f~tp~i~Hpnv~~~G~vcl~~l~~~W~p~~~i~~vl~-~i~~ll~~--p~~~~ 131 (133)
+||+|+|.| ++|||||+.+|+||+++|.++|+|+++++++|+ .|++++.+ |++++
T Consensus 84 ~pP~v~f~t-~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~ 141 (167)
T 4ds2_A 84 EPPTVRFVT-PVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDD 141 (167)
T ss_dssp SCCEEEESS-CCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSC
T ss_pred CCCEEEEeC-CcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcc
Confidence 999999999 589999999999999999999999999999754 56777775 55443
No 51
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=238.60 Aligned_cols=121 Identities=28% Similarity=0.515 Sum_probs=108.8
Q ss_pred cccccHHHHHHHHHHHHHHhhCCCCCc----EEe-eCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEe
Q 032794 9 RKALSKIASNRLQKELVEWQVNPPAGF----KHK-VTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFL 83 (133)
Q Consensus 9 ~~~~~~~~~~Rl~~El~~l~~~~~~~~----~~~-~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 83 (133)
...++..+.+||++|+++|++++++|+ .+. .++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.
T Consensus 70 ~~~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~ 149 (323)
T 3ceg_A 70 NDANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLE 149 (323)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEe
Confidence 345788999999999999999887764 333 568999999999999999999999999999999999999999999
Q ss_pred cC----CCcCccccCCCeeecccCC-------CCCCCcC-CHHHHHHHHHHhhCCCCc
Q 032794 84 PP----APLHPHIYSNGHICLDILY-------DSWSPAM-TVSSVCISILSMLSSSTV 129 (133)
Q Consensus 84 tp----~i~Hpnv~~~G~vcl~~l~-------~~W~p~~-~i~~vl~~i~~ll~~p~~ 129 (133)
|+ .+|||||+.+|+||+++|. ++|+|++ +|.+||++|+++|.++++
T Consensus 150 T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~P 207 (323)
T 3ceg_A 150 TTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEP 207 (323)
T ss_dssp CSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSG
T ss_pred ccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCC
Confidence 95 2899999999999999997 6899999 899999999999974444
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.96 E-value=4.1e-30 Score=179.70 Aligned_cols=100 Identities=19% Similarity=0.360 Sum_probs=89.1
Q ss_pred cHHHHHHHHHHHHHHhhCCCCCcEEe-eCCCceeEEEEEECCCCCCCCCC----------EEEEEEEcCCCCCCCCCeEE
Q 032794 13 SKIASNRLQKELVEWQVNPPAGFKHK-VTDNLQRWIIEVNGAPGTLYANE----------TFELQVDFPEHYPMEAPQVI 81 (133)
Q Consensus 13 ~~~~~~Rl~~El~~l~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~v~ 81 (133)
...+.+||++|++.|++ .+. ..+|++.|.+++.||+||+|+|| .|+++|.||++||++||+|+
T Consensus 30 ~~~w~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~ 103 (172)
T 2z6o_A 30 RELWVQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIA 103 (172)
T ss_dssp THHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCB
T ss_pred cHHHHHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeee
Confidence 46679999999999998 233 45789999999999999999999 99999999999999999999
Q ss_pred EecCCCcCccccCCCeeecccCC-C---CCCCcCCHHHHHH
Q 032794 82 FLPPAPLHPHIYSNGHICLDILY-D---SWSPAMTVSSVCI 118 (133)
Q Consensus 82 f~tp~i~Hpnv~~~G~vcl~~l~-~---~W~p~~~i~~vl~ 118 (133)
|.++.++|||||.+|+||||+|. . .|+|+++|.++|.
T Consensus 104 F~~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 104 VPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp CGGGTTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred eCCCCCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 99944899999999999999994 3 5669999999973
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.85 E-value=3.7e-21 Score=135.10 Aligned_cols=113 Identities=19% Similarity=0.248 Sum_probs=90.4
Q ss_pred HHHHHHHHHHhh-CCCCCcEE--e-eCCCceeEEEEEECCCCCCCCCCE---EEEEEEcCCCCCCCCCeEEEecC-----
Q 032794 18 NRLQKELVEWQV-NPPAGFKH--K-VTDNLQRWIIEVNGAPGTLYANET---FELQVDFPEHYPMEAPQVIFLPP----- 85 (133)
Q Consensus 18 ~Rl~~El~~l~~-~~~~~~~~--~-~~~~~~~w~~~i~gp~~tpy~gg~---f~~~i~fp~~YP~~pP~v~f~tp----- 85 (133)
+|..+|+.++.+ .+...... . .+|...++.+.+.|.-.++|+||. |.+.|.||++||++||.|.|.++
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 566778877654 23322222 2 345667777888887779999998 88999999999999999977431
Q ss_pred -C---Cc-CccccCCCeeecccCCCCCCC-cCCHHHHHHHHHHhhCCCCcCC
Q 032794 86 -A---PL-HPHIYSNGHICLDILYDSWSP-AMTVSSVCISILSMLSSSTVKV 131 (133)
Q Consensus 86 -~---i~-Hpnv~~~G~vcl~~l~~~W~p-~~~i~~vl~~i~~ll~~p~~~~ 131 (133)
+ |+ |||||.+|+||+++|. +|++ +.+|.++|.+|+++|.+|+++.
T Consensus 111 ~~~~~I~~hpnVD~~G~I~lpyL~-~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 111 TISSSLPIQEYIDSNGWIALPILH-AWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TSCTTSTHHHHBCTTSBBCCGGGG-SCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred ccccccCCCCCCCCCCcEeCcccc-cCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 1 67 9999999999999995 5999 6899999999999999999985
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.82 E-value=1.6e-21 Score=133.74 Aligned_cols=99 Identities=21% Similarity=0.377 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHhhCCCCCcEEeeCCCceeEEEEEECCCCCCCCCC----------EEEEEEEcCCCCCCCCCeEEEe
Q 032794 14 KIASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANE----------TFELQVDFPEHYPMEAPQVIFL 83 (133)
Q Consensus 14 ~~~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~v~f~ 83 (133)
.....||+.||+.|-+ .+.. ..++-..|...+.||+||+|+|+ .|++++.||.+||.+||+|+|.
T Consensus 33 ~~w~~RlkeEy~alI~----yv~~-nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp 107 (168)
T 3kpa_A 33 DKWTARLKEEYASLIT----YVEH-NKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALP 107 (168)
T ss_dssp HHHHHHHHHHHHHHHH----HHHH-HHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCG
T ss_pred HHHHHHHHHHHHHHHH----HHHh-cccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecc
Confidence 5689999999999864 1211 22333678999999999999999 9999999999999999999999
Q ss_pred cCCCcCccccCCCeeecccCCC----CCCCcCCHHHHH
Q 032794 84 PPAPLHPHIYSNGHICLDILYD----SWSPAMTVSSVC 117 (133)
Q Consensus 84 tp~i~Hpnv~~~G~vcl~~l~~----~W~p~~~i~~vl 117 (133)
+..++|||++.+|+|||+++.. .=.|.++|...|
T Consensus 108 ~ldgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 108 ELEGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVL 145 (168)
T ss_dssp GGTTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHH
T ss_pred cccCcCccccCCCcEEeccccchhhHhcCCchhHHHHH
Confidence 9558999999999999999721 114566776654
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.62 E-value=9.2e-16 Score=105.93 Aligned_cols=103 Identities=17% Similarity=0.265 Sum_probs=80.5
Q ss_pred HHHHHHHHhhC-CCCCcEEe----eCCCceeEEEEEECCCCCCCCCCEEEE--EEEcCCCCCCCCCeEEEecC-----CC
Q 032794 20 LQKELVEWQVN-PPAGFKHK----VTDNLQRWIIEVNGAPGTLYANETFEL--QVDFPEHYPMEAPQVIFLPP-----AP 87 (133)
Q Consensus 20 l~~El~~l~~~-~~~~~~~~----~~~~~~~w~~~i~gp~~tpy~gg~f~~--~i~fp~~YP~~pP~v~f~tp-----~i 87 (133)
..+|+..+.+. +....... ...++..|.++|. .+|+|+.|.+ .|-||++||++||.| |.+| ..
T Consensus 25 t~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~ 99 (146)
T 3obq_A 25 TVRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIK 99 (146)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEEC
T ss_pred hHHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEEC
Confidence 34566665443 33222222 2358899999998 6899999995 999999999999999 7776 13
Q ss_pred cCccccCCCeeecccCCCCCCC-cCCHHHHHHHHHHhhCCCC
Q 032794 88 LHPHIYSNGHICLDILYDSWSP-AMTVSSVCISILSMLSSST 128 (133)
Q Consensus 88 ~Hpnv~~~G~vcl~~l~~~W~p-~~~i~~vl~~i~~ll~~p~ 128 (133)
.|||||.+|+||++.|.+ |++ ..+|.+++..++..|.+..
T Consensus 100 ~~~~Vd~~G~i~lpyL~~-W~~~~snL~~ll~~l~~~F~~ep 140 (146)
T 3obq_A 100 TGKHVDANGKIYLPYLHE-WKHPQSDLLGLIQVMIVVFGDEP 140 (146)
T ss_dssp CBTTBCTTCBBCCHHHHT-CCTTTCCHHHHHHHHHHHHHHSC
T ss_pred CCCCCCCCCCEecccccc-cCCCCCCHHHHHHHHHHHHhhCC
Confidence 899999999999999966 988 7899999999999986544
No 56
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.99 E-value=0.011 Score=38.83 Aligned_cols=105 Identities=16% Similarity=0.109 Sum_probs=60.6
Q ss_pred HHHHHHHHHhhCCCCCcEEeeC---CCceeEEEEEECCCCCCC--CCCEEEEEEEcCCCCCCCCCeEEEecCCCcCcccc
Q 032794 19 RLQKELVEWQVNPPAGFKHKVT---DNLQRWIIEVNGAPGTLY--ANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIY 93 (133)
Q Consensus 19 Rl~~El~~l~~~~~~~~~~~~~---~~~~~w~~~i~gp~~tpy--~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpnv~ 93 (133)
+...|+..|+.-=...+..... .....+.+.+..+.+..- ..-.+.+.|.+|++||..+|.|...+++ ++.
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~~----~L~ 87 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPR----GLS 87 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEEE----SSC
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcCC----CCC
Confidence 5778999888643333443321 134455556653322111 1247889999999999999999988732 122
Q ss_pred C--CCeeecccCCCCC---CCcCCHHHHHHHHHHhhCCCC
Q 032794 94 S--NGHICLDILYDSW---SPAMTVSSVCISILSMLSSST 128 (133)
Q Consensus 94 ~--~G~vcl~~l~~~W---~p~~~i~~vl~~i~~ll~~p~ 128 (133)
. -..+| +.|.+.| .-.--|.+++..++..|.+-+
T Consensus 88 ~~~~~~L~-~~L~~~~~e~~G~~mif~lv~~lqe~l~~~n 126 (128)
T 2day_A 88 DEQIHTIL-QVLGHVAKAGLGTAMLYELIEKGKEILSGPS 126 (128)
T ss_dssp HHHHHHHH-HHHHHHHHHTTTSCCHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHH-HHHHHHHHHhCCCEEhHHHHHHHHHHHHhcc
Confidence 1 00111 1222233 222358888888888887644
No 57
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.67 E-value=0.012 Score=38.71 Aligned_cols=69 Identities=22% Similarity=0.297 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHhhCCCCCcEEeeCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecC
Q 032794 16 ASNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP 85 (133)
Q Consensus 16 ~~~Rl~~El~~l~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp 85 (133)
...+...|+..|+.-=...+.+.. +....+.+.|..-.+..-+.-.+.+.|.||++||..||.|.+.++
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~~~-~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~~ 79 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTVLS-ENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFSQ 79 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEECC-SSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEEcc-CCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEcC
Confidence 345678899998864333343322 223555555553222222344788999999999999999988763
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.52 E-value=0.046 Score=36.28 Aligned_cols=69 Identities=14% Similarity=0.119 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhhCCCCCcEEeeC-------CCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecC
Q 032794 16 ASNRLQKELVEWQVNPPAGFKHKVT-------DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP 85 (133)
Q Consensus 16 ~~~Rl~~El~~l~~~~~~~~~~~~~-------~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp 85 (133)
...+-..|+..|+.-=...+..... +....+.+.|....+ .-..-.+.+.|.+|++||..+|.|.+.++
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 11 YYEIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred hHHHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 3456678998888643223332221 124567777774332 11234788999999999999999998774
No 59
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=96.42 E-value=0.05 Score=38.48 Aligned_cols=81 Identities=19% Similarity=0.388 Sum_probs=61.9
Q ss_pred HHHHHHHHHhhCCCCCcE--EeeCCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCCcCccccCCC
Q 032794 19 RLQKELVEWQVNPPAGFK--HKVTDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPPAPLHPHIYSNG 96 (133)
Q Consensus 19 Rl~~El~~l~~~~~~~~~--~~~~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp~i~Hpnv~~~G 96 (133)
+|.+|+.+| |+. +..+.++....+.+.... |....++|.++.+||.++|.+...-|..++
T Consensus 5 ~li~Ei~~i------GW~~l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~~~~------- 66 (186)
T 3zqs_A 5 SLIEEIGTL------GWDKLVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPVPFC------- 66 (186)
T ss_dssp SHHHHHHHH------CGGGEEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSSCCC-------
T ss_pred HHHHHHHHh------CCceeeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCCCcc-------
Confidence 677888877 332 234667888888888444 688999999999999999988877773231
Q ss_pred eeecccCCCCCCCcCCHHHHHHHHHHhhC
Q 032794 97 HICLDILYDSWSPAMTVSSVCISILSMLS 125 (133)
Q Consensus 97 ~vcl~~l~~~W~p~~~i~~vl~~i~~ll~ 125 (133)
-.|.+..+|.+++.+.+..|.
T Consensus 67 --------~~w~~~ssL~~v~~qF~~~Le 87 (186)
T 3zqs_A 67 --------ASWTPQSSLISIYSQFLAAIE 87 (186)
T ss_dssp --------CCCCTTCCHHHHHHHHHHHHH
T ss_pred --------cccCCCccHHHHHHHHHHHHH
Confidence 379999999999988877664
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=95.52 E-value=0.079 Score=34.98 Aligned_cols=106 Identities=17% Similarity=0.182 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHhhCCCCCcEEeeCC------CceeEEEEEECCCC-C-CCCCCEEEEEEEcCCCCCCCCCeEEEecCCC
Q 032794 16 ASNRLQKELVEWQVNPPAGFKHKVTD------NLQRWIIEVNGAPG-T-LYANETFELQVDFPEHYPMEAPQVIFLPPAP 87 (133)
Q Consensus 16 ~~~Rl~~El~~l~~~~~~~~~~~~~~------~~~~w~~~i~gp~~-t-py~gg~f~~~i~fp~~YP~~pP~v~f~tp~i 87 (133)
...+...|+..|+.-=...+...... ......+.|. +.+ . .-..-.+.+.|.||++||..+|.|...+.+
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~~~- 88 (137)
T 1ukx_A 11 YSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKNAK- 88 (137)
T ss_dssp HHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEEEE-
T ss_pred hHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEecCC-
Confidence 45567889988886433334433211 1344556665 222 1 001246889999999999999999885522
Q ss_pred cCccccCCC-eeecccCCCCCC---CcCCHHHHHHHHHHhhCC
Q 032794 88 LHPHIYSNG-HICLDILYDSWS---PAMTVSSVCISILSMLSS 126 (133)
Q Consensus 88 ~Hpnv~~~G-~vcl~~l~~~W~---p~~~i~~vl~~i~~ll~~ 126 (133)
++...- ....+.|.+.|. -.--|.+++..++..|.+
T Consensus 89 ---~L~~~~~~~L~~~L~~~~~e~~G~~mif~lv~~lqe~l~~ 128 (137)
T 1ukx_A 89 ---GLSNESVNLLKSHLEELAKKQCGEVMIFELAHHVQSFLSE 128 (137)
T ss_dssp ---SSSSSHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHHHHHHhCCCEEhHHHHHHHHHHHHh
Confidence 122100 011112222232 222577777777766643
No 61
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=95.30 E-value=0.13 Score=34.98 Aligned_cols=69 Identities=19% Similarity=0.158 Sum_probs=42.6
Q ss_pred cHHHHHHHHHHHHHHhhC-C-CCCcEEeeC--------------CC-c--eeEEEEEECCCCCCCCCCEEEEEEEcCCCC
Q 032794 13 SKIASNRLQKELVEWQVN-P-PAGFKHKVT--------------DN-L--QRWIIEVNGAPGTLYANETFELQVDFPEHY 73 (133)
Q Consensus 13 ~~~~~~Rl~~El~~l~~~-~-~~~~~~~~~--------------~~-~--~~w~~~i~gp~~tpy~gg~f~~~i~fp~~Y 73 (133)
......+-..|+..|..- + ..-+.+.+. .+ . ..+.+.+.-. + + ...+.+.|.+|.+|
T Consensus 12 ~~~~~e~Q~eElEaL~SIY~~~de~~v~d~~~~~~l~~~~~~~~~~~p~~~~~~i~l~~~-~-~--~~~i~L~v~lP~~Y 87 (154)
T 2daw_A 12 VKESLQLQLLEMEMLFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQIE-E-P--KVKIDLQVTMPHSY 87 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSTTSEEESCGGGTHHHHHHHHTSCCSCCCCEEEEEEEEET-T-T--TEEEEEEEEECSST
T ss_pred hhhhHHHHHHHHHHHHHhCCCCCeEEEeccchHHHHHHhhcccccCCCCceEEEEEEecC-C-C--CceEEEEEEcCCCC
Confidence 344556677888888863 3 133444221 01 1 3444444321 1 1 23799999999999
Q ss_pred CCCCCeEEEecC
Q 032794 74 PMEAPQVIFLPP 85 (133)
Q Consensus 74 P~~pP~v~f~tp 85 (133)
|..+|.|...++
T Consensus 88 P~~~P~i~l~~~ 99 (154)
T 2daw_A 88 PYLALQLFGRSS 99 (154)
T ss_dssp TSSCCEEEEECS
T ss_pred CCCCCcEEEEeC
Confidence 999999998873
No 62
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.12 E-value=0.12 Score=33.70 Aligned_cols=65 Identities=17% Similarity=0.163 Sum_probs=40.7
Q ss_pred HHHHHHHHHhhC-CC-CCcEEee--CCCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec
Q 032794 19 RLQKELVEWQVN-PP-AGFKHKV--TDNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLP 84 (133)
Q Consensus 19 Rl~~El~~l~~~-~~-~~~~~~~--~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 84 (133)
+...|+..|+.- +. ..+.... ..+...+.+.+..... .=..-.+.+.|.+|.+||..+|.|...+
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGF-MDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCTT-TTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCCC-CCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 456788888763 21 1333322 1234577777764321 0012478999999999999999997664
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=92.06 E-value=0.11 Score=35.14 Aligned_cols=24 Identities=25% Similarity=0.456 Sum_probs=21.8
Q ss_pred EEEEEEEcCCCCCCCCCeEEEecC
Q 032794 62 TFELQVDFPEHYPMEAPQVIFLPP 85 (133)
Q Consensus 62 ~f~~~i~fp~~YP~~pP~v~f~tp 85 (133)
.+.+.|.+|.+||..||.|...++
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 588999999999999999998874
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=73.36 E-value=3.2 Score=19.00 Aligned_cols=21 Identities=43% Similarity=0.537 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHhhCCCCCc
Q 032794 15 IASNRLQKELVEWQVNPPAGF 35 (133)
Q Consensus 15 ~~~~Rl~~El~~l~~~~~~~~ 35 (133)
+...||.-|+...+.+|+.|.
T Consensus 5 seldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHHhhhccCCCCCC
Confidence 357899999999999988774
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=48.55 E-value=18 Score=25.65 Aligned_cols=26 Identities=15% Similarity=0.294 Sum_probs=22.7
Q ss_pred CCCEEEEEEEcCCCCCC-----CCCeEEEec
Q 032794 59 ANETFELQVDFPEHYPM-----EAPQVIFLP 84 (133)
Q Consensus 59 ~gg~f~~~i~fp~~YP~-----~pP~v~f~t 84 (133)
+.|.|.|+-.+|--||. .||.|.|.-
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 36899999999999998 899998864
No 66
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=39.51 E-value=91 Score=21.46 Aligned_cols=43 Identities=19% Similarity=0.313 Sum_probs=32.0
Q ss_pred CCceeEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecC
Q 032794 41 DNLQRWIIEVNGAPGTLYANETFELQVDFPEHYPMEAPQVIFLPP 85 (133)
Q Consensus 41 ~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~tp 85 (133)
+...+|.+-+.|+.+.-...-+=++.+.+.+.||. |...+..|
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~P 72 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAP 72 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSS
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCC
Confidence 45789999999987754555677789999999985 55555443
No 67
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=32.84 E-value=26 Score=25.40 Aligned_cols=25 Identities=20% Similarity=0.355 Sum_probs=21.9
Q ss_pred CCEEEEEEEcCCCCC-------CCCCeEEEec
Q 032794 60 NETFELQVDFPEHYP-------MEAPQVIFLP 84 (133)
Q Consensus 60 gg~f~~~i~fp~~YP-------~~pP~v~f~t 84 (133)
.|.|.|+-.+|--|| ..||.|.|.-
T Consensus 135 ~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~V 166 (241)
T 2bum_B 135 NGYYVFRTIKPGPYPWRNRINEWRPAHIHFSL 166 (241)
T ss_dssp TSEEEEEEECCCCEEESSSTTEEECSEEEEEE
T ss_pred CceEEEEEecCCccccCCCCCCCcCceEEEEE
Confidence 599999999999998 4799998864
No 68
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=31.08 E-value=29 Score=26.20 Aligned_cols=25 Identities=16% Similarity=0.298 Sum_probs=21.2
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeEEEec
Q 032794 60 NETFELQVDFPEHYP------------------MEAPQVIFLP 84 (133)
Q Consensus 60 gg~f~~~i~fp~~YP------------------~~pP~v~f~t 84 (133)
.|.|.|+-.+|--|| ..||.|.|.-
T Consensus 188 ~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~V 230 (312)
T 2xsu_A 188 NGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYFV 230 (312)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEEE
T ss_pred CceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEEE
Confidence 489999999999998 5788888764
No 69
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=30.40 E-value=30 Score=26.10 Aligned_cols=25 Identities=16% Similarity=0.300 Sum_probs=21.3
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeEEEec
Q 032794 60 NETFELQVDFPEHYP------------------MEAPQVIFLP 84 (133)
Q Consensus 60 gg~f~~~i~fp~~YP------------------~~pP~v~f~t 84 (133)
.|.|.|.-.+|--|| ..||.|.|.-
T Consensus 184 ~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~V 226 (311)
T 2azq_A 184 EGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFFI 226 (311)
T ss_dssp TCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEEE
T ss_pred CceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEEE
Confidence 399999999999998 5689998863
No 70
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=30.38 E-value=31 Score=25.84 Aligned_cols=25 Identities=24% Similarity=0.493 Sum_probs=21.4
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeEEEec
Q 032794 60 NETFELQVDFPEHYP------------------MEAPQVIFLP 84 (133)
Q Consensus 60 gg~f~~~i~fp~~YP------------------~~pP~v~f~t 84 (133)
.|.|.|+-.+|--|| ..||.|.|.-
T Consensus 184 ~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~V 226 (293)
T 1tmx_A 184 DGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFMV 226 (293)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEEE
T ss_pred CceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEEE
Confidence 588999999999998 4689998864
No 71
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=29.85 E-value=32 Score=24.95 Aligned_cols=25 Identities=12% Similarity=0.214 Sum_probs=22.3
Q ss_pred CCEEEEEEEcCCCCCC-------CCCeEEEec
Q 032794 60 NETFELQVDFPEHYPM-------EAPQVIFLP 84 (133)
Q Consensus 60 gg~f~~~i~fp~~YP~-------~pP~v~f~t 84 (133)
.|.|.|+-.+|--||. .||.|.|.-
T Consensus 134 ~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~V 165 (238)
T 3t63_M 134 DGYYSFRTIKPGPAPWRNGPNDWRPAHIYFGI 165 (238)
T ss_dssp TSEEEEEEECCCCEEESSSTTEEECSEEEEEE
T ss_pred CceEEEEEECCcCccCCCCCCCCcCCeEEEEE
Confidence 5999999999999986 789999875
No 72
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=29.75 E-value=32 Score=25.70 Aligned_cols=25 Identities=24% Similarity=0.551 Sum_probs=21.3
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeEEEec
Q 032794 60 NETFELQVDFPEHYP------------------MEAPQVIFLP 84 (133)
Q Consensus 60 gg~f~~~i~fp~~YP------------------~~pP~v~f~t 84 (133)
.|.|.|+=.+|--|| ..||.|.|.-
T Consensus 181 ~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~V 223 (290)
T 3n9t_A 181 DGCFAIQTTVPVCYPIPTDGPVGEMLDAANRHAWRPAHLHFMI 223 (290)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHHTCCCEECCEEEEEE
T ss_pred CceEEEEEeCCCCcCCCCCCcHHHHHHhccCCCCcCceEEEEE
Confidence 499999999999999 3689998863
No 73
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=28.21 E-value=39 Score=23.73 Aligned_cols=24 Identities=17% Similarity=0.145 Sum_probs=21.4
Q ss_pred CEEEEEEEcCCCCCCC-----CCeEEEec
Q 032794 61 ETFELQVDFPEHYPME-----APQVIFLP 84 (133)
Q Consensus 61 g~f~~~i~fp~~YP~~-----pP~v~f~t 84 (133)
|.|.|+-.+|--||.. ||.|.|.-
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~V 130 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINISL 130 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEEE
Confidence 8899999999999987 88888864
No 74
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=28.13 E-value=36 Score=24.89 Aligned_cols=25 Identities=20% Similarity=0.400 Sum_probs=20.9
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeEEEec
Q 032794 60 NETFELQVDFPEHYP------------------MEAPQVIFLP 84 (133)
Q Consensus 60 gg~f~~~i~fp~~YP------------------~~pP~v~f~t 84 (133)
.|.|.|+-.+|--|| ..||.|.|.-
T Consensus 154 ~G~y~F~TI~Pg~Y~~p~dGp~G~ll~~~grh~~RpaHIH~~V 196 (254)
T 2boy_A 154 NGRFTLRTIVPAPYEIPKNGPTGALLAAAGWHAWRPAHLHWII 196 (254)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEEE
T ss_pred CceEEEEEECCccccCCCCCcHHHHHHhcccccCCCceEEEEE
Confidence 489999999999887 5789998864
No 75
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=27.38 E-value=50 Score=17.00 Aligned_cols=14 Identities=14% Similarity=0.278 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHh
Q 032794 15 IASNRLQKELVEWQ 28 (133)
Q Consensus 15 ~~~~Rl~~El~~l~ 28 (133)
+..+||..|++.+.
T Consensus 28 ~~~~~~~~~~~~~~ 41 (42)
T 3g9r_A 28 SKIKRIENEIKRIK 41 (42)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 45789999999876
No 76
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=27.18 E-value=37 Score=25.64 Aligned_cols=25 Identities=12% Similarity=0.383 Sum_probs=21.3
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeEEEec
Q 032794 60 NETFELQVDFPEHYP------------------MEAPQVIFLP 84 (133)
Q Consensus 60 gg~f~~~i~fp~~YP------------------~~pP~v~f~t 84 (133)
.|.|.|+-.+|--|| ..||.|.|.-
T Consensus 187 ~G~y~F~TI~Pg~Yp~p~dgp~g~lL~~~grh~~RpaHIHf~V 229 (311)
T 1dmh_A 187 NGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGNRPAHIHYFV 229 (311)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECSEEEEEE
T ss_pred CceEEEEEEcCCcccCCCCCcHHHHHHhcccCCCCCceEEEEE
Confidence 399999999999997 5689998863
No 77
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=26.79 E-value=35 Score=25.37 Aligned_cols=25 Identities=12% Similarity=0.307 Sum_probs=20.6
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeEEEec
Q 032794 60 NETFELQVDFPEHYP------------------MEAPQVIFLP 84 (133)
Q Consensus 60 gg~f~~~i~fp~~YP------------------~~pP~v~f~t 84 (133)
.|.|.|+=.+|--|| ..||.|.|.-
T Consensus 183 dG~y~F~TI~Pg~Yp~p~dGp~G~lL~~~grh~~RpaHIH~~V 225 (280)
T 3hhy_A 183 EGRYEITTIQPAPYQIPTDGPTGQFIEAQNGHPWRPAHLHLIV 225 (280)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECSCEEEEE
T ss_pred CceEEEEEECCcCcCCCCCCcHHHHHHhcCCCCCCCcEEEEEE
Confidence 399999999998887 5688888763
No 78
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=24.44 E-value=56 Score=23.96 Aligned_cols=24 Identities=17% Similarity=0.426 Sum_probs=19.5
Q ss_pred CCEEEEEEEcCCCC------------------CCCCCeEEEe
Q 032794 60 NETFELQVDFPEHY------------------PMEAPQVIFL 83 (133)
Q Consensus 60 gg~f~~~i~fp~~Y------------------P~~pP~v~f~ 83 (133)
.|.|.|+=.+|--| |+.|+.|.|.
T Consensus 151 ~G~y~F~TI~P~~Ypip~dGp~g~ll~~~gr~~~RpaHIHf~ 192 (260)
T 3th1_A 151 QGNYRVRTTMPVPYQIPYEGPTGRLLGHLGSHTWRPAHVHFK 192 (260)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHTTCCSEECCEEEEE
T ss_pred CCEEEEEEECCCCCCCCCCCcHHHHHHhcCCCCCCCCeEEEE
Confidence 38999999999666 5678888886
No 79
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=24.38 E-value=1.6e+02 Score=19.49 Aligned_cols=42 Identities=14% Similarity=0.264 Sum_probs=32.1
Q ss_pred CceeEE--EEEECCCCCCCC-CCEEEEEEEcCCCCCCCCCeEEEecC
Q 032794 42 NLQRWI--IEVNGAPGTLYA-NETFELQVDFPEHYPMEAPQVIFLPP 85 (133)
Q Consensus 42 ~~~~w~--~~i~gp~~tpy~-gg~f~~~i~fp~~YP~~pP~v~f~tp 85 (133)
-..+|. +.+.|+.|.... .-+=++.+.+.+.|+. |...+..|
T Consensus 31 ~~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~n--p~r~v~~p 75 (140)
T 3qrl_A 31 PVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFAN--PNRTFTDP 75 (140)
T ss_dssp CCEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSSS--CEEEECST
T ss_pred cccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCCC--CeEEEcCC
Confidence 347998 899999987664 4566788889999884 77777665
No 80
>4dac_A Computationally designed crystal forming protein; alpha-helix, three-helix bundle, coiled-coil protein, DE NOV computational protein design; 2.10A {Synthetic}
Probab=23.00 E-value=68 Score=14.74 Aligned_cols=15 Identities=27% Similarity=0.297 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHhh
Q 032794 15 IASNRLQKELVEWQV 29 (133)
Q Consensus 15 ~~~~Rl~~El~~l~~ 29 (133)
+..+||.+|.-.+.-
T Consensus 8 anvkrlekevgkleg 22 (28)
T 4dac_A 8 ANVKRLEKEVGKLEG 22 (28)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhhhhh
Confidence 457899999988753
No 81
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=21.70 E-value=1.5e+02 Score=18.17 Aligned_cols=24 Identities=17% Similarity=0.332 Sum_probs=19.1
Q ss_pred CCEEEEEEEcCCCCCCCCCeEEEec
Q 032794 60 NETFELQVDFPEHYPMEAPQVIFLP 84 (133)
Q Consensus 60 gg~f~~~i~fp~~YP~~pP~v~f~t 84 (133)
+..+...|.|+..|+. +|+|.+.-
T Consensus 28 ~R~~~~~V~F~~~F~~-~P~V~v~l 51 (101)
T 2ccv_A 28 TRELAKNITFASPYCR-PPVVLLSI 51 (101)
T ss_dssp CEEEEEEEECSSCCSS-CCEEEEEE
T ss_pred ceEEEEEeEeCcccCC-CCEEEEEe
Confidence 3467888999999995 88987654
No 82
>3kxt_A Chromatin protein CREN7; protein-DNA complex, crenarchaea chromatin protein, minor-GR binding, methylation; 1.60A {Sulfolobus solfataricus} PDB: 2jtm_A 3lwh_A* 3lwi_A*
Probab=21.58 E-value=52 Score=18.23 Aligned_cols=11 Identities=27% Similarity=0.987 Sum_probs=8.8
Q ss_pred EEEEcCCCCCC
Q 032794 65 LQVDFPEHYPM 75 (133)
Q Consensus 65 ~~i~fp~~YP~ 75 (133)
|+-.+|++||.
T Consensus 46 fR~k~pddy~~ 56 (56)
T 3kxt_A 46 FRHKLPDDYPI 56 (56)
T ss_dssp EEEECCTTCCC
T ss_pred eeeeCcCcCCC
Confidence 46789999984
No 83
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=21.10 E-value=52 Score=20.03 Aligned_cols=14 Identities=14% Similarity=0.216 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHH
Q 032794 14 KIASNRLQKELVEW 27 (133)
Q Consensus 14 ~~~~~Rl~~El~~l 27 (133)
-+..|||++||+-|
T Consensus 61 LsQLKRvQRdlrGL 74 (87)
T 2rf4_B 61 ISQLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhhcCC
Confidence 34578999998876
No 84
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=20.09 E-value=72 Score=23.31 Aligned_cols=25 Identities=12% Similarity=0.174 Sum_probs=20.3
Q ss_pred CCEEEEEEEcCCCCC-------------------CCCCeEEEec
Q 032794 60 NETFELQVDFPEHYP-------------------MEAPQVIFLP 84 (133)
Q Consensus 60 gg~f~~~i~fp~~YP-------------------~~pP~v~f~t 84 (133)
.|.|.|+-.+|--|| ..||.|.|.-
T Consensus 156 ~G~y~F~TI~Pg~Yp~p~dgp~G~ll~a~~grh~~RpaHIHf~V 199 (257)
T 3o5u_A 156 DGSIEFHSIRPVPYEIPKAGPTGQLMNSYLGRHSWRPAHIHIRI 199 (257)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHTTTSSCCEECCCEEEEE
T ss_pred CceEEEEEECCCCcCCCCCCchhhhhhhhccCCCCCCceEEEEE
Confidence 499999999999996 3678888763
Done!