BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032808
(133 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2VPQ9|EAF6_MOUSE Chromatin modification-related protein MEAF6 OS=Mus musculus
GN=Meaf6 PE=2 SV=1
Length = 191
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS 69
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++
Sbjct: 19 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSN 72
>sp|Q9HAF1|EAF6_HUMAN Chromatin modification-related protein MEAF6 OS=Homo sapiens
GN=MEAF6 PE=1 SV=1
Length = 191
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS 69
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++
Sbjct: 19 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSN 72
>sp|Q58CU0|EAF6_BOVIN Chromatin modification-related protein MEAF6 OS=Bos taurus
GN=MEAF6 PE=2 SV=2
Length = 191
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS 69
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++
Sbjct: 19 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSN 72
>sp|Q52KD8|EAF6_XENLA Chromatin modification-related protein MEAF6 OS=Xenopus laevis
GN=meaf6 PE=2 SV=1
Length = 188
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNT 68
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN+
Sbjct: 19 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNS 71
>sp|Q5ZIX3|EAF6_CHICK Chromatin modification-related protein MEAF6 OS=Gallus gallus
GN=MEAF6 PE=2 SV=1
Length = 182
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS 69
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++
Sbjct: 21 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSN 74
>sp|Q68ER9|EAF6_XENTR Chromatin modification-related protein MEAF6 OS=Xenopus
tropicalis GN=meaf6 PE=2 SV=1
Length = 191
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNT 68
LA LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN+
Sbjct: 19 LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNS 71
>sp|Q6AZD3|EAF6_DANRE Chromatin modification-related protein MEAF6 OS=Danio rerio
GN=meaf6 PE=2 SV=1
Length = 192
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTS 69
L+ LV ++ + L N+E Q+Y E SYL+D +GN +G++ +L++ KN++
Sbjct: 19 LSELVKRKQELAETLVNLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSN 72
>sp|O14240|EAF6_SCHPO Chromatin modification-related protein eaf6
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=eaf6 PE=1 SV=1
Length = 138
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFLSSGKNTSKLK 72
L ++ KR + L +E+ +Y LE SYL+ GN +GFEG L + N S L+
Sbjct: 25 LHEMIEKRQLLETSLIGLEDSIYRLEGSYLEKTSGTGNIIRGFEGLLKN--NASNLR 79
>sp|Q6FJ46|EAF6_CANGA Chromatin modification-related protein EAF6 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=EAF6 PE=3 SV=1
Length = 91
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 16 LAALVSKRSRFQDELRNIENQVYELETSYLQDIG---QFGNAFKGFEGFLSSGKNTSKLK 72
L AL++ R +D+L ++ ++Y+ E+ Y G + N +GF+G + N S +
Sbjct: 12 LKALLADRKELEDKLDKLQQEIYDKESEYFDVDGGSKSYHNILRGFDGMSRTQSNNSNMT 71
Query: 73 N 73
N
Sbjct: 72 N 72
>sp|Q09023|CHI2_BRANA Endochitinase CH25 OS=Brassica napus PE=2 SV=1
Length = 322
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 3 LRQQRGNSNPAAT--LAALVSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEG 60
+ Q G + P T L+ ++S RS+F D L++ + Y D F NA K F G
Sbjct: 56 CQSQCGGTPPGPTGDLSGIIS-RSQFDDMLKHRNDNACPARGFYTYDA--FINAAKSFPG 112
Query: 61 FLSSGKNTSKLKNL 74
F ++G ++ K +
Sbjct: 113 FGTTGDTATRKKEI 126
>sp|Q9FYC7|PDAT2_ARATH Putative phospholipid:diacylglycerol acyltransferase 2
OS=Arabidopsis thaliana GN=PDAT2 PE=3 SV=1
Length = 665
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 15/111 (13%)
Query: 9 NSNPAATLAALVSKRSRFQDELRNIENQVYELE-TSYLQDIGQFGNAFKGFEGFLSSGKN 67
+S+ L + SKR Q L N+ Q Y L+ S +++ ++G +S GK
Sbjct: 348 DSHAEEGLNCIYSKRKSSQLSLSNLHKQNYSLKPVSRVKEPAKYGR-------IVSFGKR 400
Query: 68 TSKLKNLELGVMMEDSIMALVGLRVETCLLTDRVNQRGEEWHRHQEMGRET 118
S+L + +L + + + G ++ GE W + EM RE+
Sbjct: 401 ASELPSSQLSTLNVKELSRVDG-------NSNDSTSCGEFWSEYNEMSRES 444
>sp|P06221|RPOL_BPSP6 DNA-directed RNA polymerase OS=Enterobacteria phage SP6 PE=2 SV=1
Length = 874
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 62 LSSGKNTSKLKNLELGVMMEDSIMALVGLRVETCLLTD 99
++ +N + L G ++E IMA LRV TCL+ D
Sbjct: 715 FAAKRNEGLMYTLPTGFILEQKIMATEMLRVRTCLMGD 752
>sp|Q6C626|EAF6_YARLI Chromatin modification-related protein EAF6 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=EAF6 PE=3 SV=1
Length = 135
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 20 VSKRSRFQDELRNIENQVYELETSYLQDIGQFGNAFKGFEGFL 62
++K+ L ++E Q++ LE +YL++ GN KGF+ ++
Sbjct: 20 INKKKTHDKNLNSLEEQIFTLEGAYLEETSH-GNLVKGFDTYI 61
>sp|Q82ZJ2|PNP_ENTFA Polyribonucleotide nucleotidyltransferase OS=Enterococcus faecalis
(strain ATCC 700802 / V583) GN=pnp PE=3 SV=1
Length = 704
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 6 QRGNSNPAATLAALVSKRSRFQDEL-RNIE-NQVYELETSYLQDIGQFGNAFKGFEGFLS 63
Q GN + A++ A ++ K + +EL + +E QVY + ++ G F N KG +G +
Sbjct: 595 QDGNVSIASSDAEMIKKAIKIIEELTKEVEVGQVYLAKVVRIEKFGAFVNLIKGKDGLIH 654
Query: 64 -SGKNTSKLKNLELGVMMEDSIMALV 88
S ++ N+E V + D ++ V
Sbjct: 655 ISQLANERVNNVEDVVKLGDEVLVKV 680
>sp|Q6CPA6|EAF6_KLULA Chromatin modification-related protein EAF6 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=EAF6 PE=3 SV=1
Length = 115
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 18 ALVSKRSRFQDELRNIENQVYELETSYL--QDIGQFGNAFKGFEGF 61
ALV K+ + + + ++E +VY+ ET YL + + GN GF+GF
Sbjct: 18 ALVQKK-QLEAKWNSLEQEVYDKETEYLSQKPSSRMGNILLGFQGF 62
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,679,801
Number of Sequences: 539616
Number of extensions: 1622608
Number of successful extensions: 4778
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 4765
Number of HSP's gapped (non-prelim): 28
length of query: 133
length of database: 191,569,459
effective HSP length: 99
effective length of query: 34
effective length of database: 138,147,475
effective search space: 4697014150
effective search space used: 4697014150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)