BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032810
(133 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q03FR6|DNAJ_PEDPA Chaperone protein DnaJ OS=Pediococcus pentosaceus (strain ATCC
25745 / 183-1w) GN=dnaJ PE=3 SV=1
Length = 374
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Query: 98 RIIAQRRCEVCGGSGLVLREKDYFKCPECG 127
R++ Q+ C+VC G+G ++E KCP CG
Sbjct: 184 RMVRQQTCDVCNGTGKEIKE----KCPTCG 209
>sp|O83151|HFLK_TREPA Protein HflK OS=Treponema pallidum (strain Nichols) GN=hflK PE=3
SV=1
Length = 328
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 74 TWQIIVGAIAGVTPFVVAGIEFSKRIIAQRRCEVCGGSGLVLREKDYFKCPECGMSY 130
TW ++ G I GV V+ GI RII+ +G+V R Y + E G+ Y
Sbjct: 10 TWSVVAGCIGGVLGIVIVGIASPIRIIS------PTDNGVVTRFGKYHRTLEPGLHY 60
>sp|Q5KWZ8|DNAJ_GEOKA Chaperone protein DnaJ OS=Geobacillus kaustophilus (strain HTA426)
GN=dnaJ PE=3 SV=1
Length = 382
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Query: 98 RIIAQRRCEVCGGSGLVLREKDYFKCPECG 127
RI+ +R C VCGG+G + E KCP CG
Sbjct: 186 RIVNRRTCPVCGGTGRYIPE----KCPTCG 211
>sp|A4IR30|DNAJ_GEOTN Chaperone protein DnaJ OS=Geobacillus thermodenitrificans (strain
NG80-2) GN=dnaJ PE=3 SV=1
Length = 381
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Query: 98 RIIAQRRCEVCGGSGLVLREKDYFKCPECG 127
RI+ +R C VCGG+G + E KCP CG
Sbjct: 185 RIVNRRTCPVCGGTGRHIPE----KCPTCG 210
>sp|B7V3D1|AROB_PSEA8 3-dehydroquinate synthase OS=Pseudomonas aeruginosa (strain
LESB58) GN=aroB PE=3 SV=1
Length = 368
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 45 NLIGNRRWAAPSAASNDVSSVAGPVTAEVTWQIIVGAIAG--VTPFVVAGIEFSKR 98
NL+G+ RW AP V+ ++ A + + ++ A+ G VTP V+ E K+
Sbjct: 20 NLLGDARWFAPHIVGRRVAVISNETVAPLYLETLLKALQGHEVTPVVLPDGEAYKQ 75
>sp|Q02EX9|AROB_PSEAB 3-dehydroquinate synthase OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=aroB PE=3 SV=1
Length = 368
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 45 NLIGNRRWAAPSAASNDVSSVAGPVTAEVTWQIIVGAIAG--VTPFVVAGIEFSKR 98
NL+G+ RW AP V+ ++ A + + ++ A+ G VTP V+ E K+
Sbjct: 20 NLLGDARWFAPHIVGRRVAVISNETVAPLYLETLLKALQGHEVTPVVLPDGEAYKQ 75
>sp|P34002|AROB_PSEAE 3-dehydroquinate synthase OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=aroB PE=3
SV=2
Length = 368
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 45 NLIGNRRWAAPSAASNDVSSVAGPVTAEVTWQIIVGAIAG--VTPFVVAGIEFSKR 98
NL+G+ RW AP V+ ++ A + + ++ A+ G VTP V+ E K+
Sbjct: 20 NLLGDARWFAPHIVGRRVAVISNETVAPLYLETLLKALQGHEVTPVVLPDGEAYKQ 75
>sp|Q113G4|Y2125_TRIEI Probable transcriptional regulatory protein Tery_2125
OS=Trichodesmium erythraeum (strain IMS101)
GN=Tery_2125 PE=3 SV=1
Length = 253
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 46 LIGNRRWAAPSAASNDVSSVAGPVTAEVTWQIIVGAIAGVTP 87
+ G+ +WA V +V G V A+V+ QIIV A +G P
Sbjct: 1 MAGHSKWANIKRQKARVDAVKGKVFAKVSRQIIVAARSGADP 42
>sp|P36582|PCK1_SCHPO Protein kinase C-like 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pck1 PE=3 SV=2
Length = 988
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Query: 105 CEVCGGSGLVLREKDYFKCPECGMS 129
C CG L LR KD FKC ECG++
Sbjct: 494 CAHCGFF-LPLRRKDCFKCVECGIT 517
>sp|Q28KP2|MURQ_JANSC N-acetylmuramic acid 6-phosphate etherase OS=Jannaschia sp. (strain
CCS1) GN=murQ PE=3 SV=1
Length = 316
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 57 AASNDVSSVAGPVTA--EVTWQIIVG-AIAGVTPFVVAGIEFSKRI 99
AA +D ++ A V A T +++G A++G TPFV+ I++++RI
Sbjct: 123 AAEDDEATGAEDVKAIGLTTKDVVIGIAVSGRTPFVMGAIDYARRI 168
>sp|P78595|CDR2_CANAL Multidrug resistance protein CDR2 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=CDR2 PE=3 SV=2
Length = 1499
Score = 28.9 bits (63), Expect = 8.6, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 54 APSAASNDVSSVAGPVTAEVTWQIIVGAIA 83
APS + + +AG +T+E+ +QI+VG I+
Sbjct: 1260 APSRTFSWFAFIAGQITSEIPFQIVVGTIS 1289
>sp|Q9Z9E9|DNAJ_CHLPN Chaperone protein DnaJ OS=Chlamydia pneumoniae GN=dnaJ PE=3 SV=1
Length = 392
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 4/29 (13%)
Query: 103 RRCEVCGGSGLVLREKDYFK----CPECG 127
+ CE C GSG V++ + +F CPECG
Sbjct: 176 KSCERCKGSGQVVQSRGFFSMASTCPECG 204
>sp|Q9VT28|FRY_DROME Protein furry OS=Drosophila melanogaster GN=fry PE=1 SV=2
Length = 3479
Score = 28.9 bits (63), Expect = 9.1, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 30 SKVEFACCNRRRCCYNLIGNRRWAAPSAASNDVSS 64
+++ F N RC N+ GN +APS A+N V++
Sbjct: 912 TRILFTFLNIWRCATNVNGNNTTSAPSGATNVVNT 946
>sp|Q03QU2|DNAJ_LACBA Chaperone protein DnaJ OS=Lactobacillus brevis (strain ATCC 367 /
JCM 1170) GN=dnaJ PE=3 SV=1
Length = 382
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 98 RIIAQRRCEVCGGSGLVLREKDYFKCPECGMS 129
R+ +Q+ C VC G+G ++E KCP CG S
Sbjct: 187 RMRSQQPCPVCHGTGQEIKE----KCPTCGGS 214
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.134 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,881,890
Number of Sequences: 539616
Number of extensions: 1786265
Number of successful extensions: 6141
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 6117
Number of HSP's gapped (non-prelim): 61
length of query: 133
length of database: 191,569,459
effective HSP length: 99
effective length of query: 34
effective length of database: 138,147,475
effective search space: 4697014150
effective search space used: 4697014150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)