Query 032813
Match_columns 133
No_of_seqs 285 out of 2202
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 06:16:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032813.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/032813hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 99.9 3.2E-27 7E-32 187.9 8.9 106 1-132 334-440 (537)
2 PLN02614 long-chain acyl-CoA s 99.9 3.5E-25 7.6E-30 180.8 8.4 106 1-132 420-529 (666)
3 COG1022 FAA1 Long-chain acyl-C 99.9 5E-25 1.1E-29 177.2 8.2 94 1-131 386-480 (613)
4 KOG1256 Long-chain acyl-CoA sy 99.9 9E-25 1.9E-29 175.5 8.8 104 1-130 453-557 (691)
5 COG0318 CaiC Acyl-CoA syntheta 99.9 1.8E-24 3.9E-29 172.7 8.9 107 1-132 326-433 (534)
6 PLN02861 long-chain-fatty-acid 99.9 5.7E-24 1.2E-28 173.5 8.8 106 1-132 417-526 (660)
7 PF00501 AMP-binding: AMP-bind 99.9 6.4E-24 1.4E-28 163.2 7.0 105 1-129 312-417 (417)
8 PTZ00342 acyl-CoA synthetase; 99.9 1.9E-23 4.1E-28 172.4 9.7 105 1-131 495-602 (746)
9 PTZ00216 acyl-CoA synthetase; 99.9 1.7E-23 3.7E-28 171.6 8.5 106 1-132 461-569 (700)
10 PLN02574 4-coumarate--CoA liga 99.9 2.7E-23 5.7E-28 166.2 9.0 108 1-132 354-462 (560)
11 PLN02736 long-chain acyl-CoA s 99.9 5.6E-23 1.2E-27 167.1 8.5 106 1-132 410-520 (651)
12 PLN02387 long-chain-fatty-acid 99.9 6.7E-23 1.5E-27 168.1 8.7 107 1-131 454-567 (696)
13 PRK06334 long chain fatty acid 99.9 7.8E-23 1.7E-27 163.1 8.8 108 1-132 334-442 (539)
14 PRK07769 long-chain-fatty-acid 99.9 1.1E-22 2.3E-27 164.8 9.0 95 24-132 391-495 (631)
15 PRK08633 2-acyl-glycerophospho 99.9 3.6E-22 7.9E-27 169.7 9.2 114 1-132 932-1051(1146)
16 PRK12476 putative fatty-acid-- 99.9 6.3E-22 1.4E-26 159.9 9.6 95 24-132 402-507 (612)
17 PTZ00237 acetyl-CoA synthetase 99.9 7.6E-22 1.7E-26 160.7 9.9 107 1-132 414-524 (647)
18 PLN02654 acetate-CoA ligase 99.9 1E-21 2.2E-26 160.4 10.0 109 1-132 434-545 (666)
19 PRK00174 acetyl-CoA synthetase 99.9 1.4E-21 3.1E-26 158.3 10.7 109 1-132 404-515 (637)
20 PLN02430 long-chain-fatty-acid 99.9 7E-22 1.5E-26 161.3 8.9 105 1-131 417-525 (660)
21 PLN02246 4-coumarate--CoA liga 99.9 1.6E-21 3.4E-26 155.0 10.3 110 1-131 333-443 (537)
22 PRK05677 long-chain-fatty-acid 99.9 1.3E-21 2.8E-26 156.5 9.6 104 1-131 360-464 (562)
23 PRK09274 peptide synthase; Pro 99.9 1.5E-21 3.3E-26 155.4 10.0 90 24-132 352-452 (552)
24 TIGR02188 Ac_CoA_lig_AcsA acet 99.9 2.4E-21 5.3E-26 156.6 10.8 109 1-132 395-507 (625)
25 PRK12467 peptide synthase; Pro 99.9 5.1E-22 1.1E-26 183.8 7.7 117 1-132 3386-3503(3956)
26 TIGR03443 alpha_am_amid L-amin 99.9 1.1E-21 2.4E-26 170.1 9.1 119 1-132 564-710 (1389)
27 PRK07638 acyl-CoA synthetase; 99.9 2.8E-21 6E-26 151.7 9.9 105 1-132 288-393 (487)
28 KOG1177 Long chain fatty acid 99.9 7E-22 1.5E-26 152.9 5.8 108 1-132 385-493 (596)
29 PRK05691 peptide synthase; Val 99.9 2.2E-21 4.7E-26 180.5 10.1 92 23-133 369-461 (4334)
30 PRK09088 acyl-CoA synthetase; 99.9 4.1E-21 8.9E-26 150.7 10.0 108 1-132 285-393 (488)
31 PRK12316 peptide synthase; Pro 99.8 2.2E-21 4.7E-26 181.9 9.6 117 1-132 2296-2413(5163)
32 PRK12492 long-chain-fatty-acid 99.8 3.6E-21 7.7E-26 153.9 9.6 106 1-132 367-473 (562)
33 PRK05851 long-chain-fatty-acid 99.8 3.4E-21 7.4E-26 153.0 9.4 84 22-132 343-427 (525)
34 PRK06164 acyl-CoA synthetase; 99.8 5.8E-21 1.2E-25 151.6 9.8 109 1-132 328-438 (540)
35 PRK06178 acyl-CoA synthetase; 99.8 6.8E-21 1.5E-25 152.2 10.2 109 1-131 362-473 (567)
36 PLN02330 4-coumarate--CoA liga 99.8 3.5E-21 7.5E-26 153.4 8.2 90 22-132 359-449 (546)
37 PRK12316 peptide synthase; Pro 99.8 3E-21 6.5E-26 181.0 8.9 113 1-132 3343-3456(5163)
38 COG0365 Acs Acyl-coenzyme A sy 99.8 7.1E-21 1.5E-25 151.3 9.6 101 1-131 324-427 (528)
39 PRK06839 acyl-CoA synthetase; 99.8 9.6E-21 2.1E-25 148.5 10.2 106 1-132 297-403 (496)
40 PRK04319 acetyl-CoA synthetase 99.8 7.9E-21 1.7E-25 152.1 9.6 105 1-132 357-464 (570)
41 PRK06145 acyl-CoA synthetase; 99.8 1.3E-20 2.7E-25 148.1 10.0 105 1-131 299-404 (497)
42 PRK06060 acyl-CoA synthetase; 99.8 6.1E-21 1.3E-25 156.4 8.6 102 1-132 295-397 (705)
43 TIGR02316 propion_prpE propion 99.8 1.7E-20 3.7E-25 152.0 10.8 113 1-132 388-504 (628)
44 PRK05857 acyl-CoA synthetase; 99.8 8.3E-21 1.8E-25 151.3 8.8 109 1-132 319-434 (540)
45 PRK10252 entF enterobactin syn 99.8 6.9E-21 1.5E-25 163.9 8.7 116 1-132 751-869 (1296)
46 PRK07514 malonyl-CoA synthase; 99.8 1.7E-20 3.8E-25 147.4 9.9 105 1-131 303-408 (504)
47 PRK07059 Long-chain-fatty-acid 99.8 1.6E-20 3.4E-25 149.8 9.7 106 1-132 361-467 (557)
48 PRK12467 peptide synthase; Pro 99.8 9.9E-21 2.1E-25 175.4 9.7 117 1-132 1869-1986(3956)
49 PRK08315 AMP-binding domain pr 99.8 1.3E-20 2.9E-25 149.9 9.0 108 1-131 350-458 (559)
50 PRK07529 AMP-binding domain pr 99.8 1.4E-20 3E-25 152.8 9.2 105 1-132 367-477 (632)
51 PLN03051 acyl-activating enzym 99.8 2E-20 4.2E-25 148.0 9.3 113 1-132 272-389 (499)
52 PLN02860 o-succinylbenzoate-Co 99.8 1.7E-20 3.6E-25 150.2 8.9 82 24-132 364-446 (563)
53 PRK13390 acyl-CoA synthetase; 99.8 2.7E-20 5.9E-25 146.6 9.5 107 1-132 304-411 (501)
54 PRK05691 peptide synthase; Val 99.8 1.6E-20 3.6E-25 174.8 9.1 115 1-131 4018-4133(4334)
55 PRK08008 caiC putative crotono 99.8 3.4E-20 7.4E-25 146.4 9.4 105 1-131 321-429 (517)
56 PRK07788 acyl-CoA synthetase; 99.8 2.2E-20 4.8E-25 148.8 8.3 102 1-132 357-459 (549)
57 PRK05852 acyl-CoA synthetase; 99.8 4E-20 8.6E-25 146.9 9.5 108 1-132 329-440 (534)
58 PRK08316 acyl-CoA synthetase; 99.8 5.1E-20 1.1E-24 145.1 9.8 106 1-132 321-427 (523)
59 PRK06155 crotonobetaine/carnit 99.8 6.1E-20 1.3E-24 146.4 10.4 103 1-132 326-432 (542)
60 PRK10946 entE enterobactin syn 99.8 3.5E-20 7.6E-25 147.5 8.8 90 21-132 350-441 (536)
61 PRK07470 acyl-CoA synthetase; 99.8 5.3E-20 1.1E-24 145.8 9.6 109 1-132 314-426 (528)
62 PRK03640 O-succinylbenzoic aci 99.8 6.2E-20 1.3E-24 143.6 9.8 105 1-132 287-392 (483)
63 PRK08314 long-chain-fatty-acid 99.8 7.7E-20 1.7E-24 145.2 9.7 109 1-132 339-448 (546)
64 PRK13382 acyl-CoA synthetase; 99.8 4.4E-20 9.5E-25 147.0 8.3 101 1-131 346-447 (537)
65 PRK13295 cyclohexanecarboxylat 99.8 5.7E-20 1.2E-24 146.5 8.8 104 1-131 346-450 (547)
66 TIGR02275 DHB_AMP_lig 2,3-dihy 99.8 8.7E-20 1.9E-24 144.7 9.8 89 21-131 349-439 (527)
67 PRK08751 putative long-chain f 99.8 8.1E-20 1.7E-24 145.7 9.7 105 1-131 363-468 (560)
68 PRK10524 prpE propionyl-CoA sy 99.8 1.1E-19 2.4E-24 147.1 10.3 113 1-132 389-505 (629)
69 PRK12583 acyl-CoA synthetase; 99.8 1.2E-19 2.6E-24 144.4 10.1 107 1-131 352-459 (558)
70 TIGR01734 D-ala-DACP-lig D-ala 99.8 1E-19 2.2E-24 143.0 9.4 112 1-132 293-405 (502)
71 TIGR03208 cyc_hxne_CoA_lg cycl 99.8 1.2E-19 2.5E-24 144.3 9.6 105 1-132 344-449 (538)
72 PRK07656 long-chain-fatty-acid 99.8 1.4E-19 3E-24 142.3 9.9 108 1-132 316-424 (513)
73 PRK05605 long-chain-fatty-acid 99.8 1.1E-19 2.4E-24 145.4 9.4 105 1-131 370-476 (573)
74 PRK07786 long-chain-fatty-acid 99.8 1.5E-19 3.2E-24 143.9 10.0 105 1-131 325-430 (542)
75 PRK06087 short chain acyl-CoA 99.8 8.1E-20 1.8E-24 145.4 8.4 107 1-132 335-442 (547)
76 PRK07787 acyl-CoA synthetase; 99.8 1.6E-19 3.5E-24 141.4 9.7 104 1-131 275-382 (471)
77 PRK08180 feruloyl-CoA synthase 99.8 8.4E-20 1.8E-24 147.7 8.2 97 1-131 374-476 (614)
78 TIGR01733 AA-adenyl-dom amino 99.8 1.4E-19 2.9E-24 138.6 8.5 115 1-132 269-387 (408)
79 PRK12582 acyl-CoA synthetase; 99.8 1.3E-19 2.8E-24 146.9 8.2 97 1-131 386-488 (624)
80 PRK06710 long-chain-fatty-acid 99.8 2.3E-19 5.1E-24 143.3 9.3 106 1-132 357-463 (563)
81 PRK08974 long-chain-fatty-acid 99.8 6.2E-19 1.3E-23 140.8 10.8 104 1-131 359-463 (560)
82 KOG1180 Acyl-CoA synthetase [L 99.8 7.2E-20 1.6E-24 143.7 5.0 104 1-129 436-544 (678)
83 TIGR02262 benz_CoA_lig benzoat 99.8 6.2E-19 1.4E-23 139.1 10.2 103 1-131 312-415 (508)
84 PRK07867 acyl-CoA synthetase; 99.8 4.5E-19 9.7E-24 141.2 9.3 101 1-132 299-413 (529)
85 PRK06188 acyl-CoA synthetase; 99.8 6.1E-19 1.3E-23 139.6 9.4 109 1-132 315-425 (524)
86 PRK13388 acyl-CoA synthetase; 99.8 6.6E-19 1.4E-23 140.5 9.6 102 1-132 297-412 (540)
87 COG1021 EntE Peptide arylation 99.8 1.7E-19 3.7E-24 137.5 5.8 89 20-130 354-444 (542)
88 PRK08276 long-chain-fatty-acid 99.8 8.2E-19 1.8E-23 138.1 9.8 104 1-131 296-400 (502)
89 TIGR03205 pimA dicarboxylate-- 99.8 1.1E-18 2.5E-23 138.7 10.6 106 1-132 346-453 (541)
90 TIGR03098 ligase_PEP_1 acyl-Co 99.8 7.7E-19 1.7E-23 138.3 9.5 114 1-132 309-426 (515)
91 PRK12406 long-chain-fatty-acid 99.8 8.2E-19 1.8E-23 138.4 9.3 104 1-131 305-410 (509)
92 PRK09192 acyl-CoA synthetase; 99.8 5.5E-19 1.2E-23 141.9 8.3 85 24-132 385-470 (579)
93 TIGR01217 ac_ac_CoA_syn acetoa 99.8 6.2E-19 1.3E-23 143.8 8.7 91 21-132 436-531 (652)
94 PRK08043 bifunctional acyl-[ac 99.8 5.4E-19 1.2E-23 145.3 8.3 108 1-132 513-623 (718)
95 PRK03584 acetoacetyl-CoA synth 99.8 8.4E-19 1.8E-23 142.7 9.1 91 21-132 435-530 (655)
96 PRK13383 acyl-CoA synthetase; 99.8 1.3E-18 2.9E-23 137.7 9.1 102 1-132 326-428 (516)
97 PRK04813 D-alanine--poly(phosp 99.8 1.9E-18 4.2E-23 135.5 9.9 112 1-132 295-407 (503)
98 PRK13391 acyl-CoA synthetase; 99.8 2.3E-18 5.1E-23 136.0 9.9 105 1-132 309-414 (511)
99 PRK05850 acyl-CoA synthetase; 99.8 2.1E-18 4.6E-23 138.1 8.8 93 25-132 372-468 (578)
100 PRK06187 long-chain-fatty-acid 99.7 6.5E-18 1.4E-22 132.8 9.8 109 1-132 315-427 (521)
101 PRK07445 O-succinylbenzoic aci 99.7 9.3E-18 2E-22 131.7 8.0 93 1-132 263-356 (452)
102 PRK07008 long-chain-fatty-acid 99.7 1.6E-17 3.5E-22 132.3 9.4 83 23-131 355-440 (539)
103 PLN02479 acetate-CoA ligase 99.7 9.7E-18 2.1E-22 134.4 8.1 87 24-132 372-462 (567)
104 PRK07768 long-chain-fatty-acid 99.7 1.4E-17 3.1E-22 132.5 8.6 87 22-131 358-445 (545)
105 PLN03102 acyl-activating enzym 99.7 2.3E-17 5E-22 132.7 9.6 85 24-132 365-452 (579)
106 PRK08162 acyl-CoA synthetase; 99.7 4.7E-17 1E-21 129.4 10.2 87 23-131 357-447 (545)
107 PRK06814 acylglycerophosphoeth 99.7 2.8E-17 6.1E-22 140.5 8.5 101 1-132 941-1042(1140)
108 KOG1175 Acyl-CoA synthetase [L 99.7 6.5E-17 1.4E-21 130.2 8.5 108 1-131 394-506 (626)
109 PRK05620 long-chain-fatty-acid 99.7 5.5E-17 1.2E-21 130.2 8.1 116 1-132 332-462 (576)
110 PRK09029 O-succinylbenzoic aci 99.7 1.9E-16 4.1E-21 123.7 6.8 90 1-132 273-363 (458)
111 PRK06018 putative acyl-CoA syn 99.7 2.9E-16 6.3E-21 125.1 7.9 84 23-131 355-441 (542)
112 PLN03052 acetate--CoA ligase; 99.7 7.8E-16 1.7E-20 127.2 10.3 111 1-132 506-621 (728)
113 TIGR01923 menE O-succinylbenzo 99.6 7.6E-16 1.7E-20 119.0 9.3 100 1-132 252-352 (436)
114 PRK07868 acyl-CoA synthetase; 99.6 7.7E-16 1.7E-20 130.8 8.6 98 1-131 753-867 (994)
115 PRK08279 long-chain-acyl-CoA s 99.6 4.4E-15 9.4E-20 119.7 9.8 72 45-132 397-471 (600)
116 COG1020 EntF Non-ribosomal pep 99.6 5.2E-15 1.1E-19 120.0 8.4 87 23-131 540-627 (642)
117 PRK07798 acyl-CoA synthetase; 99.6 1.7E-14 3.7E-19 113.9 9.5 85 28-132 353-440 (533)
118 PRK07824 O-succinylbenzoic aci 99.6 7.2E-15 1.6E-19 111.6 6.5 72 25-132 193-265 (358)
119 PRK08308 acyl-CoA synthetase; 99.3 1.2E-11 2.6E-16 95.7 8.1 78 1-132 245-323 (414)
120 TIGR02155 PA_CoA_ligase phenyl 99.1 1.2E-10 2.5E-15 90.7 5.8 67 32-132 254-327 (422)
121 TIGR03335 F390_ftsA coenzyme F 98.4 1E-06 2.2E-11 69.6 7.1 72 31-132 258-339 (445)
122 KOG1179 Very long-chain acyl-C 98.3 8.3E-06 1.8E-10 65.5 9.2 73 45-132 442-520 (649)
123 PTZ00297 pantothenate kinase; 98.1 6.6E-06 1.4E-10 72.9 6.0 63 26-130 802-866 (1452)
124 KOG3628 Predicted AMP-binding 97.9 4.3E-05 9.4E-10 65.4 7.9 96 26-133 1155-1262(1363)
125 TIGR02372 4_coum_CoA_lig 4-cou 97.7 3.1E-05 6.7E-10 60.2 3.1 28 105-132 279-307 (386)
126 KOG1178 Non-ribosomal peptide 97.7 3E-05 6.6E-10 66.5 2.7 35 98-132 451-486 (1032)
127 PRK09188 serine/threonine prot 97.6 3.9E-05 8.5E-10 59.4 3.0 25 90-123 207-233 (365)
128 COG1541 PaaK Coenzyme F390 syn 97.2 0.00066 1.4E-08 53.6 5.4 69 31-133 266-344 (438)
129 KOG3628 Predicted AMP-binding 97.2 0.0005 1.1E-08 59.1 4.4 92 26-126 504-596 (1363)
130 PF04443 LuxE: Acyl-protein sy 95.4 0.095 2E-06 40.8 7.5 55 35-124 287-350 (365)
131 TIGR02304 aden_form_hyp probab 86.0 0.66 1.4E-05 36.9 2.6 27 102-128 296-332 (430)
132 PF11974 MG1: Alpha-2-macroglo 55.3 10 0.00022 23.7 1.9 35 24-58 22-59 (97)
133 PF01060 DUF290: Transthyretin 48.0 16 0.00034 21.8 1.9 24 109-132 33-57 (80)
134 PLN02249 indole-3-acetic acid- 44.6 20 0.00043 30.0 2.5 28 103-130 410-442 (597)
135 PF10411 DsbC_N: Disulfide bon 42.5 24 0.00052 19.7 1.9 17 106-122 33-50 (57)
136 PF11347 DUF3148: Protein of u 35.2 62 0.0013 18.7 2.8 34 92-125 13-46 (63)
137 PF03321 GH3: GH3 auxin-respon 32.8 97 0.0021 25.4 4.7 25 106-130 374-403 (528)
138 PF07210 DUF1416: Protein of u 30.8 53 0.0011 20.2 2.2 19 25-44 16-34 (85)
139 PF09956 DUF2190: Uncharacteri 28.5 42 0.0009 21.4 1.6 14 46-59 38-51 (106)
140 PLN02247 indole-3-acetic acid- 28.3 52 0.0011 27.7 2.5 28 103-130 417-449 (606)
141 PF02261 Asp_decarbox: Asparta 27.3 75 0.0016 20.7 2.6 32 29-60 38-75 (116)
142 PF10670 DUF4198: Domain of un 27.2 39 0.00085 23.5 1.4 33 26-58 160-199 (215)
143 cd06919 Asp_decarbox Aspartate 25.8 71 0.0015 20.7 2.3 32 29-60 37-74 (111)
144 PF01436 NHL: NHL repeat; Int 25.2 86 0.0019 14.4 3.1 21 107-128 6-27 (28)
145 PLN02620 indole-3-acetic acid- 25.0 70 0.0015 27.0 2.7 28 103-130 423-455 (612)
146 TIGR00223 panD L-aspartate-alp 25.0 74 0.0016 21.1 2.2 32 29-60 38-75 (126)
147 COG4924 Uncharacterized protei 24.3 65 0.0014 24.9 2.1 30 30-59 239-268 (386)
148 smart00701 PGRP Animal peptido 22.9 64 0.0014 21.5 1.7 21 106-126 61-84 (142)
149 PF01948 PyrI: Aspartate carba 22.2 40 0.00086 21.3 0.6 13 120-133 51-63 (96)
150 PF10102 DUF2341: Domain of un 22.1 1.5E+02 0.0033 18.1 3.2 30 32-62 3-40 (89)
151 PF13953 PapC_C: PapC C-termin 21.1 66 0.0014 18.4 1.4 14 47-60 27-40 (68)
152 PF13620 CarboxypepD_reg: Carb 20.2 99 0.0021 17.7 2.1 32 26-57 10-43 (82)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.94 E-value=3.2e-27 Score=187.92 Aligned_cols=106 Identities=36% Similarity=0.523 Sum_probs=95.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
|||+++.++.+... +. .+++++|+++++.+++|.+ ++|+.+++++.||||++|+++|.|| |+||++|++.|
T Consensus 334 mTE~~~~~~~~~~~---~e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY----~~NpeaT~~~~ 404 (537)
T KOG1176|consen 334 MTEAGGLITSNDWG---PE-RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGY----LKNPEATKEAF 404 (537)
T ss_pred cccccCceeecCCC---cc-CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhh----cCChHHHHhhc
Confidence 79999777766431 11 5889999999999999888 8999999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. ++||||| ||+|++|+||+| |++|+||+||.+|..
T Consensus 405 ~--------~~GW~~T---------GDiGy~D~DG~l~IvdR~KdlIk~~G~q 440 (537)
T KOG1176|consen 405 D--------DDGWFHT---------GDLGYFDEDGYLYIVDRSKDLIKYGGEQ 440 (537)
T ss_pred c--------cCCcccc---------CceEEEcCCCeEEEecchhhheeeCCEE
Confidence 6 4599999 999999999999 999999999999864
No 2
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.92 E-value=3.5e-25 Score=180.78 Aligned_cols=106 Identities=23% Similarity=0.324 Sum_probs=88.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcC-C-CCccCCCCCCeEEEEEcCccccccccccCCCchhhHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDP-E-IGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEE 78 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~-~-~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~ 78 (133)
|||+++.++... +. ...+.+++|+|+|+++++|+|. + .++++++|+.|||+|+||++|.|| |++|+.|++
T Consensus 420 ~TE~~~~~~~~~---~~-~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY----~~~pe~T~~ 491 (666)
T PLN02614 420 LTESCAGTFVSL---PD-ELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGY----YKREDLTKE 491 (666)
T ss_pred hHhhhhheeeec---cc-cCCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccc----cCCHHHhhh
Confidence 689875443322 11 1235689999999999999983 2 247899999999999999999999 999999999
Q ss_pred HHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEe-CCCC
Q 032813 79 IIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRF-DPLF 132 (133)
Q Consensus 79 ~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki-~~~~ 132 (133)
+| .+|||+| ||+|++|+||+| |+||+|||||+ .|.+
T Consensus 492 ~f---------~dGw~~T---------GDlg~~d~dG~l~i~gR~kd~ik~~~G~~ 529 (666)
T PLN02614 492 VL---------IDGWLHT---------GDVGEWQPNGSMKIIDRKKNIFKLSQGEY 529 (666)
T ss_pred hh---------ccCCccc---------ceEEEEcCCCCEEEEEcchhceecCCCee
Confidence 99 3699999 999999999999 99999999996 5653
No 3
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=99.92 E-value=5e-25 Score=177.23 Aligned_cols=94 Identities=30% Similarity=0.460 Sum_probs=85.5
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
||||+++++.++ +.....+++|+|+|+++++|+| + |||+||||++|+|| |++|++|+++|
T Consensus 386 lTEts~~~~v~~-----~~~~~~gtvG~p~p~~evKI~d-~----------GEilVRG~~Vm~GY----yk~pe~Taeaf 445 (613)
T COG1022 386 LTETSAVVSVNP-----PDRFVLGTVGKPLPGIEVKIAD-D----------GEILVRGPNVMKGY----YKNPEATAEAF 445 (613)
T ss_pred ccccccceEEcc-----ccCcccCCcCCcCCCceEEEcc-C----------ceEEEecchhcchh----cCChHHHhhhc
Confidence 799998887764 2356789999999999999998 4 99999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
. ++|||+| ||+|.+|++|+| |+||+||+||...-
T Consensus 446 ~--------~DGWf~T---------GDlg~~d~~g~L~i~gRkK~~i~l~~G 480 (613)
T COG1022 446 T--------EDGWFRT---------GDLGELDEDGYLVITGRKKELIKLSNG 480 (613)
T ss_pred c--------ccCCccc---------CceeEEcCCCcEEEeecccceEECCCC
Confidence 7 6899999 999999999999 99999999997643
No 4
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=99.91 E-value=9e-25 Score=175.48 Aligned_cols=104 Identities=26% Similarity=0.357 Sum_probs=91.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
||||++.++...+ .....+++|.|+|+++++++|++..+.-+.+..|||||||+++|.|| +++|++|+++|
T Consensus 453 lTEts~g~~~~~~-----~d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GY----yK~p~~T~e~i 523 (691)
T KOG1256|consen 453 LTETSAGTTLTLP-----GDNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGY----YKDPEKTAEAI 523 (691)
T ss_pred ccccCCceEeccC-----CCCCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceec----cCChHHHhhhh
Confidence 7999865555432 12378999999999999999976666667777899999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDP 130 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~ 130 (133)
. ++||+|| ||+|++|++|.| |+||+|++||+-.
T Consensus 524 d--------eDGWLhT---------GDiG~~~p~G~l~IidRkK~ifklaq 557 (691)
T KOG1256|consen 524 D--------EDGWLHT---------GDIGEWDPNGTLKIIDRKKNIFKLAQ 557 (691)
T ss_pred c--------ccccccc---------ccceeECCCccEEEEecccceEEcCC
Confidence 7 7899999 999999999999 9999999999764
No 5
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.91 E-value=1.8e-24 Score=172.68 Aligned_cols=107 Identities=30% Similarity=0.486 Sum_probs=91.1
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
|||+++.++..... +...+.+++|+|+|+++++|+|+++++++| |++|||+|+||+++.|| |++|+.|++.|
T Consensus 326 ~TE~~~~~~~~~~~---~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~GY----~~~pe~t~~~f 397 (534)
T COG0318 326 LTETSPVVTINPPD---DLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMKGY----WNRPEATAEAF 397 (534)
T ss_pred ccccCceeecCCCc---hhhhcCCcccccCCCcEEEEEeCCCCccCC-CCceEEEEECchhhhhh----cCChHHHHHhh
Confidence 79998766665421 102466788999999999999976555666 99999999999999999 99999999988
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. .+|||+| ||+|++|++|+| |+||.||+||+.|.+
T Consensus 398 ~--------~~gW~~T---------GDlg~~d~~G~l~i~gR~kd~I~~gG~n 433 (534)
T COG0318 398 D--------EDGWLRT---------GDLGYVDEDGYLYIVGRLKDLIISGGEN 433 (534)
T ss_pred c--------cCCeeee---------cceEEEcCCccEEEEeccceEEEeCCeE
Confidence 5 3599999 999999999999 999999999999865
No 6
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.90 E-value=5.7e-24 Score=173.45 Aligned_cols=106 Identities=22% Similarity=0.322 Sum_probs=86.5
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcC-CCC-ccCCCCCCeEEEEEcCccccccccccCCCchhhHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDP-EIG-ASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEE 78 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~-~~g-~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~ 78 (133)
|||+++.++.... ....+.+++|+|+|+++++|+|. ++| ..++.+..|||+|+||+++.|| |++|++|++
T Consensus 417 ~TE~~~~~~~~~~----~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY----~~~pe~T~~ 488 (660)
T PLN02861 417 LTESCGGCFTSIA----NVFSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGY----HKRQDLTEE 488 (660)
T ss_pred hhhhhhceeeccc----ccCCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccc----cCCHHHHHh
Confidence 6898765544321 11235689999999999999973 334 3445667899999999999999 999999999
Q ss_pred HHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEe-CCCC
Q 032813 79 IIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRF-DPLF 132 (133)
Q Consensus 79 ~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki-~~~~ 132 (133)
+|. +|||+| ||+|++|+||+| |+||+||+||+ +|.+
T Consensus 489 ~f~---------dGw~~T---------GDlg~~d~dG~l~i~GR~kd~Ik~~~G~~ 526 (660)
T PLN02861 489 VLI---------DGWFHT---------GDIGEWQPNGAMKIIDRKKNIFKLSQGEY 526 (660)
T ss_pred hhh---------ccCccc---------CceEEECCCCcEEEEeccccceEcCCCeE
Confidence 993 699999 999999999999 99999999997 5653
No 7
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=99.90 E-value=6.4e-24 Score=163.20 Aligned_cols=105 Identities=30% Similarity=0.500 Sum_probs=90.6
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++... ......+..++|+|+|+++++|+|+++++++++|+.|||+|+||.++.|| +++|+.++++|
T Consensus 312 ~tE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~gy----~~~~~~~~~~~ 384 (417)
T PF00501_consen 312 STETGSIATIRP---PEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSGY----YNDPELTAEAF 384 (417)
T ss_dssp EGGGSSEEEEEE---TTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBSEE----TTBHHHHHHHE
T ss_pred ccccceeeeccc---ccccccccccccccccccccccccccccccccccccccccccCCccceee----ecccccccccc
Confidence 589987766442 11122466789999999999999976699999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFD 129 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~ 129 (133)
. ++|||+| ||+|++|+||+| ++||+||+||+.
T Consensus 385 ~--------~~~~~~T---------GD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 385 I--------DDGWYRT---------GDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp E--------TTSEEEE---------EEEEEEETTSEEEEEEEGSCEEEET
T ss_pred c--------cccceec---------ceEEEECCCCeEEEEEeeCCEEEeC
Confidence 6 3579999 999999999999 999999999984
No 8
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.89 E-value=1.9e-23 Score=172.43 Aligned_cols=105 Identities=17% Similarity=0.149 Sum_probs=87.8
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCC-CCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVV-RNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEI 79 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~-p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~ 79 (133)
|||+++.++.... .....+++|+|+ |+++++|+|.++.........|||+|+||++|.|| |++|++|+++
T Consensus 495 lTEt~~~~~~~~~-----~~~~~gsvG~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v~~GY----~~~pe~T~~~ 565 (746)
T PTZ00342 495 LTETTGPIFVQHA-----DDNNTESIGGPISPNTKYKVRTWETYKATDTLPKGELLIKSDSIFSGY----FLEKEQTKNA 565 (746)
T ss_pred cCcccceeeeccC-----CCCCcccccCcCCCcEEEEEecccccccCCCCCceEEEEecCcccccc----cCChhhhhhh
Confidence 7999766554321 234678999998 99999999855444455556799999999999999 9999999999
Q ss_pred HhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEe-CCC
Q 032813 80 IKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRF-DPL 131 (133)
Q Consensus 80 f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki-~~~ 131 (133)
|. .+|||+| ||+|++|+||+| |+||+||+||+ .|.
T Consensus 566 f~--------~dGW~~T---------GDig~~d~dG~l~i~gR~kdlIkls~Ge 602 (746)
T PTZ00342 566 FT--------EDGYFKT---------GDIVQINKNGSLTFLDRSKGLVKLSQGE 602 (746)
T ss_pred cC--------cCCcccC---------CcEEEECCCCeEEEEccCCCeEEeCCCE
Confidence 96 5799999 999999999999 99999999996 453
No 9
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=99.89 E-value=1.7e-23 Score=171.58 Aligned_cols=106 Identities=20% Similarity=0.262 Sum_probs=87.8
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCC-CccCCCCCCeEEEEEcCccccccccccCCCchhhHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEI-GASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEI 79 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~-g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~ 79 (133)
|||+++.++.... .....+++|+|+|+++++|+|++. ....+++..|||+|+||+++.|| |++|++|+++
T Consensus 461 ~TEt~~~~~~~~~-----~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY----~~~pe~T~~~ 531 (700)
T PTZ00216 461 LTETVCCGGIQRT-----GDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGY----YKQEELTREV 531 (700)
T ss_pred cccccccccccCC-----CCCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchh----cCChhHhhhh
Confidence 6998765544321 234568999999999999999432 23345667899999999999999 9999999999
Q ss_pred HhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEE-eCCCC
Q 032813 80 IKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVR-FDPLF 132 (133)
Q Consensus 80 f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Ik-i~~~~ 132 (133)
|. .+|||+| ||+|++|+||+| |+||+||||| +.|.+
T Consensus 532 f~--------~dGw~~T---------GDig~~d~dG~l~i~GR~kd~ik~~~G~~ 569 (700)
T PTZ00216 532 LD--------EDGWFHT---------GDVGSIAANGTLRIIGRVKALAKNCLGEY 569 (700)
T ss_pred cc--------ccCCeec---------cceEEEcCCCcEEEEEehHhheecCCCce
Confidence 96 5799999 999999999999 9999999999 77753
No 10
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.89 E-value=2.7e-23 Score=166.18 Aligned_cols=108 Identities=28% Similarity=0.385 Sum_probs=91.9
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++... .........++|+|+|+++++|+|++++++++.|+.|||+|+|++++.|| |++++.+++.|
T Consensus 354 ~tE~~~~~~~~~---~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~~~~GY----~~~~~~t~~~~ 426 (560)
T PLN02574 354 MTESTAVGTRGF---NTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCGELWIQGPGVMKGY----LNNPKATQSTI 426 (560)
T ss_pred ccccCceeecCC---CccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCeEEEEECcchhhhh----cCChhHhhhhc
Confidence 588875443221 11122456799999999999999987899999999999999999999999 99999999888
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. .+|||+| ||+|++|++|++ ++||+||+||++|.+
T Consensus 427 ~--------~~g~~~T---------GDlg~~~~~G~l~i~GR~~d~i~~~G~~ 462 (560)
T PLN02574 427 D--------KDGWLRT---------GDIAYFDEDGYLYIVDRLKEIIKYKGFQ 462 (560)
T ss_pred c--------CCCCccc---------ceEEEEECCCeEEEEecchhheEECCEE
Confidence 5 5799999 999999999999 999999999999864
No 11
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.88 E-value=5.6e-23 Score=167.14 Aligned_cols=106 Identities=29% Similarity=0.368 Sum_probs=86.0
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCc---cCCCCCCeEEEEEcCccccccccccCCCchhhH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGA---SLPHNQPGEICIRGPQIMKVAELEFWSDGGHDE 77 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~---~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~ 77 (133)
|||+++.++... ......+++|+|+|+++++|+|.+++. ...++..|||+|+||++|.|| |++|+.|+
T Consensus 410 ~TE~~~~~~~~~-----~~~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY----~~~~~~t~ 480 (651)
T PLN02736 410 MTETSCVISGMD-----EGDNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGY----YKDEVQTR 480 (651)
T ss_pred hHHhchheeccC-----CCCCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCcccccc----ccCHHHHH
Confidence 689876555432 123456899999999999999843332 223445799999999999999 99999999
Q ss_pred HHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEe-CCCC
Q 032813 78 EIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRF-DPLF 132 (133)
Q Consensus 78 ~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki-~~~~ 132 (133)
++|. .+|||+| ||+|++|+||+| |+||+||+||+ +|.+
T Consensus 481 ~~~~--------~dgw~~T---------GDlg~~d~dG~l~i~GR~kd~ik~~~G~~ 520 (651)
T PLN02736 481 EVID--------EDGWLHT---------GDIGLWLPGGRLKIIDRKKNIFKLAQGEY 520 (651)
T ss_pred hhhc--------cCCCeec---------cceEEEcCCCcEEEEEechhheEcCCCcE
Confidence 9995 5799999 999999999999 99999999997 5754
No 12
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.88 E-value=6.7e-23 Score=168.11 Aligned_cols=107 Identities=22% Similarity=0.265 Sum_probs=85.1
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCC-ccC--CCCCCeEEEEEcCccccccccccCCCchhhH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIG-ASL--PHNQPGEICIRGPQIMKVAELEFWSDGGHDE 77 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g-~~~--~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~ 77 (133)
|||+++.++.... .....+++|+|+|+++++|+|++++ ..+ .++..|||+|+||++|.|| |++|+.|+
T Consensus 454 ~TEt~~~~~~~~~-----~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY----~~~pe~T~ 524 (696)
T PLN02387 454 LTETCAGATFSEW-----DDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGY----FKNQEKTD 524 (696)
T ss_pred hhhcccceeecCc-----ccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchh----cCCHHHHh
Confidence 6998766554421 1245689999999999999984333 222 3445799999999999999 99999999
Q ss_pred HHHhhhhcccCCCCc--ccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeC-CC
Q 032813 78 EIIKLNRLTMGSSLG--WASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFD-PL 131 (133)
Q Consensus 78 ~~f~~~~~~~~~~~g--w~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~-~~ 131 (133)
++|..+ .+| ||+| ||+|++|+||+| |+||+||+||+. |.
T Consensus 525 ~~f~~d------~~G~~W~~T---------GDig~~d~dG~l~i~gR~kd~ik~~~Ge 567 (696)
T PLN02387 525 EVYKVD------ERGMRWFYT---------GDIGQFHPDGCLEIIDRKKDIVKLQHGE 567 (696)
T ss_pred hhhccc------cCCCceeec---------CceEEECCCCcEEEEEcccceEECCCCe
Confidence 998421 234 9999 999999999999 999999999984 64
No 13
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.88 E-value=7.8e-23 Score=163.10 Aligned_cols=108 Identities=19% Similarity=0.287 Sum_probs=87.5
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++.... .......++|+|+++++++|+|+++++++++|+.|||+|+|++++.|| |++++.+. |
T Consensus 334 ~TE~~~~~~~~~~----~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY----~~~~~~~~--~ 403 (539)
T PRK06334 334 TTECSPVITINTV----NSPKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSGY----LGEDFGQG--F 403 (539)
T ss_pred ccccCceEEeccC----CCCCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEEecCcccccc----cCCccccc--c
Confidence 6898866554321 112345689999999999999966789999999999999999999999 99988643 2
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.. . ..++||+| ||+|++|++|+| |+||.||+||++|.+
T Consensus 404 ~~----~-~~~~w~~T---------GD~g~~d~~G~l~~~GR~~d~ik~~G~~ 442 (539)
T PRK06334 404 VE----L-GGETWYVT---------GDLGYVDRHGELFLKGRLSRFVKIGAEM 442 (539)
T ss_pred ee----e-CCceeEEC---------CCEEEECCCCeEEEEeccCCeEEECCEE
Confidence 10 0 13589999 999999999999 999999999999864
No 14
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.88 E-value=1.1e-22 Score=164.80 Aligned_cols=95 Identities=23% Similarity=0.232 Sum_probs=81.5
Q ss_pred CccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhc---------ccCCCCccc
Q 032813 24 GSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRL---------TMGSSLGWA 94 (133)
Q Consensus 24 ~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~---------~~~~~~gw~ 94 (133)
.++|+|+++.+++|+|++++++++.|+.|||+|+||+++.|| |++++.|++.|..... .....++||
T Consensus 391 ~s~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~GY----~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~ 466 (631)
T PRK07769 391 VSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHGNNIGTGY----WGKPEETAATFQNILKSRLSESHAEGAPDDALWV 466 (631)
T ss_pred EeCCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecCCCccccc----cCChhHHHHHHhhhcccccccccccCcccCCCee
Confidence 589999999999999977899999999999999999999999 9999999999962110 000124799
Q ss_pred ccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 95 SKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 95 ~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
+| ||+|+++ ||+| |+||+|||||++|.+
T Consensus 467 ~T---------GDlg~~~-dG~l~i~GR~~d~Ik~~G~~ 495 (631)
T PRK07769 467 RT---------GDYGVYF-DGELYITGRVKDLVIIDGRN 495 (631)
T ss_pred ec---------cccccEE-CCEEEEEcccccEEEECCee
Confidence 99 9999995 9999 999999999999864
No 15
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.87 E-value=3.6e-22 Score=169.75 Aligned_cols=114 Identities=28% Similarity=0.404 Sum_probs=93.3
Q ss_pred CCCCCcccccccCCCC-----CCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchh
Q 032813 1 MTEAGPVLSMCLGFAK-----QPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGH 75 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~-----~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~ 75 (133)
+||++..++....... .....+.+++|+|+|+++++|+|+++++++++|+.|||+|+|++++.|| |++|+.
T Consensus 932 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY----~~~~~~ 1007 (1146)
T PRK08633 932 ATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKGY----LGDPEK 1007 (1146)
T ss_pred cccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccccc----cCCccc
Confidence 6898876554322110 0112356799999999999999987899999999999999999999999 999999
Q ss_pred hHHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 76 DEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 76 t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
+++.|... ..++||+| ||+|++|+||++ ++||+||+||++|.+
T Consensus 1008 t~~~~~~~-----~~~~~~~T---------GD~~~~~~~g~l~~~gR~~d~i~~~G~~ 1051 (1146)
T PRK08633 1008 TAEVIKDI-----DGIGWYVT---------GDKGHLDEDGFLTITDRYSRFAKIGGEM 1051 (1146)
T ss_pred hHHHhhcC-----CCCCeEEC---------CCEEEEcCCceEEEEecccchhhhCcEE
Confidence 99988511 12489999 999999999999 999999999998853
No 16
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=99.87 E-value=6.3e-22 Score=159.87 Aligned_cols=95 Identities=25% Similarity=0.375 Sum_probs=80.5
Q ss_pred CccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcc----------cCCCCcc
Q 032813 24 GSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLT----------MGSSLGW 93 (133)
Q Consensus 24 ~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~----------~~~~~gw 93 (133)
+++|+|+|+++++|+|++++++++.|+.|||+|+||+++.|| |++|+.|+++|...... ....++|
T Consensus 402 ~~~G~~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY----~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w 477 (612)
T PRK12476 402 VSCGQVARSQWAVIVDPDTGAELPDGEVGEIWLHGDNIGRGY----WGRPEETERTFGAKLQSRLAEGSHADGAADDGTW 477 (612)
T ss_pred EeCCCcCCCCEEEEEeCCCCcCCCCCCEEEEEEcCCcccccc----cCChHHHHHHHhhhhccccccccccccccCCCCe
Confidence 589999999999999965599999999999999999999999 99999999999521100 0012369
Q ss_pred cccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 94 ASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 94 ~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
|+| ||+|+++ ||+| |+||+||+||++|.+
T Consensus 478 ~~T---------GDlg~~~-dG~l~i~GR~~d~I~~~G~~ 507 (612)
T PRK12476 478 LRT---------GDLGVYL-DGELYITGRIADLIVIDGRN 507 (612)
T ss_pred eec---------cccceeE-CCEEEEEeccCcEEEECCcc
Confidence 999 9999985 9999 999999999999864
No 17
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.87 E-value=7.6e-22 Score=160.68 Aligned_cols=107 Identities=18% Similarity=0.266 Sum_probs=89.1
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcC---ccccccccccCCCchhhH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGP---QIMKVAELEFWSDGGHDE 77 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp---~~~~GY~~~~~~~~~~t~ 77 (133)
+||++..++.... ......+++|+|+|+++++|+| ++|++++.|+.|||+|++| +++.|| |++++.++
T Consensus 414 ~TE~~~~~~~~~~----~~~~~~~s~G~p~~g~~~~i~d-~~g~~~~~ge~GEl~v~~p~~p~~~~gy----~~~~~~~~ 484 (647)
T PTZ00237 414 QTEIGITYLYCYG----HINIPYNATGVPSIFIKPSILS-EDGKELNVNEIGEVAFKLPMPPSFATTF----YKNDEKFK 484 (647)
T ss_pred hHHhChhhhccCC----CCCCCCCCCccCcCCceEEEEC-CCCCCCCCCCceEEEEeccCCchhhCce----eCCHHHHH
Confidence 6898754433221 1123347999999999999999 5899999999999999986 789999 99999998
Q ss_pred HHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 78 EIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 78 ~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
+.|.. .+|||+| ||+|++|++|+| |+||+||+||+.|.+
T Consensus 485 ~~f~~-------~~g~~~T---------GDlg~~d~dG~l~i~GR~dd~i~~~G~r 524 (647)
T PTZ00237 485 QLFSK-------FPGYYNS---------GDLGFKDENGYYTIVSRSDDQIKISGNK 524 (647)
T ss_pred HHHhC-------CCCEEEC---------CcEEEECCCCeEEEEeccCCEEEECCEE
Confidence 87741 2689999 999999999999 999999999999864
No 18
>PLN02654 acetate-CoA ligase
Probab=99.86 E-value=1e-21 Score=160.39 Aligned_cols=109 Identities=21% Similarity=0.269 Sum_probs=90.4
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEc--CccccccccccCCCchhhHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRG--PQIMKVAELEFWSDGGHDEE 78 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~g--p~~~~GY~~~~~~~~~~t~~ 78 (133)
+||+++.++...+ .....+++++|+|+|+++++|+| ++|++++.++.|||+|++ |+++.|| |++++++++
T Consensus 434 ~TE~g~~~~~~~~---~~~~~~~gs~G~p~~g~~v~i~d-~~g~~~~~~~~Gel~v~~~~p~~~~gy----~~~~~~~~~ 505 (666)
T PLN02654 434 QTETGGFMITPLP---GAWPQKPGSATFPFFGVQPVIVD-EKGKEIEGECSGYLCVKKSWPGAFRTL----YGDHERYET 505 (666)
T ss_pred ccccCCeeeccCC---CCCCCCCCccCCCCCCceEEEEC-CCCCCCCCCCceEEEEcCCCchhhhhh----cCChHHHHH
Confidence 5888765443321 11235678999999999999999 679999999999999998 7899999 999999888
Q ss_pred HHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 79 IIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 79 ~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.|... .+|||+| ||+|++|+||++ |+||+||+||+.|..
T Consensus 506 ~~~~~------~~g~~~T---------GD~~~~d~dG~l~i~GR~dd~I~~~G~r 545 (666)
T PLN02654 506 TYFKP------FAGYYFS---------GDGCSRDKDGYYWLTGRVDDVINVSGHR 545 (666)
T ss_pred hhhhc------CCCEEEe---------CceEEECCCCcEEEeeeccCeEEeCCEE
Confidence 76421 2589999 999999999999 999999999999864
No 19
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.86 E-value=1.4e-21 Score=158.35 Aligned_cols=109 Identities=23% Similarity=0.245 Sum_probs=89.6
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEc--CccccccccccCCCchhhHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRG--PQIMKVAELEFWSDGGHDEE 78 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~g--p~~~~GY~~~~~~~~~~t~~ 78 (133)
+||++..++.... .....+++++|+|+++++++|+| +++++++.|+.|||+|+| |++++|| |++++.+.+
T Consensus 404 ~TE~~~~~~~~~~---~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~p~~~~gy----~~~~~~~~~ 475 (637)
T PRK00174 404 QTETGGIMITPLP---GATPLKPGSATRPLPGIQPAVVD-EEGNPLEGGEGGNLVIKDPWPGMMRTI----YGDHERFVK 475 (637)
T ss_pred ccccCCceEecCC---CCCCcCCCcccCCCCCceEEEEC-CCCCCCCCCCcEEEEEcCCCCcccccc----cCCHHHHHH
Confidence 5888765543221 11234567899999999999999 679999999999999999 6899999 999998877
Q ss_pred HHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 79 IIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 79 ~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.|... .+|||+| ||+|++|+||+| |+||+||+||++|..
T Consensus 476 ~~~~~------~~g~~~T---------GDl~~~d~dG~l~~~GR~dd~ik~~G~~ 515 (637)
T PRK00174 476 TYFST------FKGMYFT---------GDGARRDEDGYYWITGRVDDVLNVSGHR 515 (637)
T ss_pred hhhcC------CCCEEEC---------CceEEEcCCCcEEEEEecccEEEeCCEE
Confidence 76311 3689999 999999999999 999999999998853
No 20
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.86 E-value=7e-22 Score=161.31 Aligned_cols=105 Identities=23% Similarity=0.328 Sum_probs=86.0
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcC-CCC-ccCCCCCCeEEEEEcCccccccccccCCCchhhHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDP-EIG-ASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEE 78 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~-~~g-~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~ 78 (133)
|||+++.++.... ......+++|+|+|+++++|+|. +.+ .+++.+..|||+|+||+++.|| |++|+.|++
T Consensus 417 ~TE~~~~~~~~~~----~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY----~~~~e~t~~ 488 (660)
T PLN02430 417 LTETLGPTTLGFP----DEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGY----YKNPELTEE 488 (660)
T ss_pred hhhhhhceEeecc----ccCCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccc----cCChHHhhh
Confidence 6898765554321 11234689999999999999862 333 4566667899999999999999 999999999
Q ss_pred HHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEe-CCC
Q 032813 79 IIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRF-DPL 131 (133)
Q Consensus 79 ~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki-~~~ 131 (133)
+| .+|||+| ||+|++|+||+| |+||+||+||+ .|.
T Consensus 489 ~~---------~dGw~~T---------GDig~~d~dG~l~i~gR~kd~ik~~~G~ 525 (660)
T PLN02430 489 VM---------KDGWFHT---------GDIGEILPNGVLKIIDRKKNLIKLSQGE 525 (660)
T ss_pred hh---------hccceec---------cceEEECCCCcEEEEEcccccEEcCCCc
Confidence 98 4799999 999999999999 99999999997 454
No 21
>PLN02246 4-coumarate--CoA ligase
Probab=99.86 E-value=1.6e-21 Score=154.99 Aligned_cols=110 Identities=56% Similarity=0.924 Sum_probs=91.5
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++............+++++|+|+++++++|+|++++++++.|+.|||+|+|+.++.|| |++++.+++.|
T Consensus 333 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY----~~~~~~~~~~~ 408 (537)
T PLN02246 333 MTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEICIRGPQIMKGY----LNDPEATANTI 408 (537)
T ss_pred ccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEEEECCchhccc----cCCchhhhhcc
Confidence 58887654432211111223456789999999999999977899999999999999999999999 99999998887
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
. .++||+| ||+|+++++|++ ++||.||+||+.|.
T Consensus 409 ~--------~~~~~~T---------GD~~~~~~~g~l~~~GR~dd~i~~~G~ 443 (537)
T PLN02246 409 D--------KDGWLHT---------GDIGYIDDDDELFIVDRLKELIKYKGF 443 (537)
T ss_pred c--------CCCCeee---------cceEEEeCCCeEEEEecccceEEECCE
Confidence 5 5689999 999999999999 99999999999875
No 22
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.86 E-value=1.3e-21 Score=156.47 Aligned_cols=104 Identities=37% Similarity=0.602 Sum_probs=90.1
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++.... ....++++|+|+|+++++|+| +++++++.|+.|||+|+||+++.|| |++++.+++.|
T Consensus 360 ~tE~~~~~~~~~~-----~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY----~~~~~~t~~~~ 429 (562)
T PRK05677 360 MTETSPVVSVNPS-----QAIQVGTIGIPVPSTLCKVID-DDGNELPLGEVGELCVKGPQVMKGY----WQRPEATDEIL 429 (562)
T ss_pred ccccCcceeecCc-----cCCCCCccCccCCCCEEEEEC-CCCCCCCCCCCeEEEEecCccchhh----cCCchhhhhcc
Confidence 5888765544321 123567899999999999999 5789999999999999999999999 99999999888
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
. .++||+| ||+|++|++|++ +.||+||+||++|.
T Consensus 430 ~--------~~g~~~T---------GDlg~~~~~G~l~i~GR~~d~i~~~G~ 464 (562)
T PRK05677 430 D--------SDGWLKT---------GDIALIQEDGYMRIVDRKKDMILVSGF 464 (562)
T ss_pred C--------CCCcccc---------cceEEECCCCcEEEEecCcCeEEeCCE
Confidence 5 5689999 999999999999 99999999999875
No 23
>PRK09274 peptide synthase; Provisional
Probab=99.86 E-value=1.5e-21 Score=155.39 Aligned_cols=90 Identities=20% Similarity=0.210 Sum_probs=79.4
Q ss_pred CccccCCCCcEEEEEcCC--------CCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCc--c
Q 032813 24 GSCGTVVRNAELKVIDPE--------IGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLG--W 93 (133)
Q Consensus 24 ~~vG~p~p~~~v~i~d~~--------~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~g--w 93 (133)
.++|+|+|+++++|+|+. ++++++.|+.|||+|+||+++.|| |++|+.++..|..+ .+| |
T Consensus 352 ~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY----~~~~~~t~~~~~~~------~~g~~w 421 (552)
T PRK09274 352 ICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIVVAGPMVTRSY----YNRPEATRLAKIPD------GQGDVW 421 (552)
T ss_pred cccCccCCCceEEEEeccccccccccccccCCCCCeeEEEEecCcccccc----cCChHHhhhhhccc------CCCCcE
Confidence 479999999999999852 467899999999999999999999 99999998877421 235 9
Q ss_pred cccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 94 ASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 94 ~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
|+| ||+|++|+||+| ++||+||+||++|.+
T Consensus 422 ~~T---------GDlg~~d~dG~l~~~GR~~d~i~~~G~~ 452 (552)
T PRK09274 422 HRM---------GDLGYLDAQGRLWFCGRKAHRVETAGGT 452 (552)
T ss_pred EEc---------CCEEEEccCCcEEEEeccCCeEEECCEE
Confidence 999 999999999999 999999999999864
No 24
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.86 E-value=2.4e-21 Score=156.64 Aligned_cols=109 Identities=23% Similarity=0.248 Sum_probs=90.4
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCC-CCCCeEEEEEc--CccccccccccCCCchhhH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLP-HNQPGEICIRG--PQIMKVAELEFWSDGGHDE 77 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~-~g~~Gel~i~g--p~~~~GY~~~~~~~~~~t~ 77 (133)
+||++..++.... .....+++++|+|+++++++|+| ++|++++ +|+.|||+|++ |+++.|| |++++.+.
T Consensus 395 ~TE~~~~~~~~~~---~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~g~~GeL~v~~p~p~~~~gy----~~~~~~~~ 466 (625)
T TIGR02188 395 QTETGGIMITPLP---GATPTKPGSATLPFFGIEPAVVD-EEGNPVEGPGEGGYLVIKQPWPGMLRTI----YGDHERFV 466 (625)
T ss_pred ccccCCceeecCC---CCCCcCCCcccCCcCCceEEEEC-CCCCCCCCCCCeEEEEEccCCCcccccc----cCChHHHH
Confidence 5898765443321 11234678999999999999999 7899999 99999999999 6899999 99999888
Q ss_pred HHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 78 EIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 78 ~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
+.+... .+|||+| ||+|++|+||+| |+||+||+||++|..
T Consensus 467 ~~~~~~------~~g~~~T---------GDl~~~d~dG~l~i~GR~dd~i~~~G~r 507 (625)
T TIGR02188 467 DTYFSP------FPGYYFT---------GDGARRDKDGYIWITGRVDDVINVSGHR 507 (625)
T ss_pred HHHhcc------CCCEEEC---------CceEEEcCCCcEEEEecccCEEEeCCEE
Confidence 877421 3589999 999999999999 999999999998853
No 25
>PRK12467 peptide synthase; Provisional
Probab=99.86 E-value=5.1e-22 Score=183.76 Aligned_cols=117 Identities=16% Similarity=0.074 Sum_probs=92.9
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+|||+..++...............++|+|+++++++|+| ++++++|.|++|||+|+|+.+++|| |++|+.|+++|
T Consensus 3386 ~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~vp~G~~GEL~i~G~~v~~GY----~~~~~~T~~~F 3460 (3956)
T PRK12467 3386 PTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLD-GQLNPVPVGVAGELYIGGVGLARGY----HQRPSLTAERF 3460 (3956)
T ss_pred cchhEeeeEEEecccccccCCCCCCCccccCCCEEEEEC-CCCCCCCCCCCceEEEcchhhhhhc----cCCcccchhhc
Confidence 699987665543211111123347899999999999999 6799999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
..+ +|- ..+.++|+|||+|++++||+| |+||+|+|||++|..
T Consensus 3461 ~~~--------p~~--~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~r 3503 (3956)
T PRK12467 3461 VAD--------PFS--GSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFR 3503 (3956)
T ss_pred cCC--------CCC--CCCceeeccchhheecCCCcEEEeccccceEeeceEe
Confidence 733 331 123344445999999999999 999999999999875
No 26
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.86 E-value=1.1e-21 Score=170.05 Aligned_cols=119 Identities=16% Similarity=0.064 Sum_probs=90.0
Q ss_pred CCCCCcccccccCCCCCC------CCCCCCccccCCCCcEEEEEcCC-CCccCCCCCCeEEEEEcCccccccccccCCCc
Q 032813 1 MTEAGPVLSMCLGFAKQP------FPTKSGSCGTVVRNAELKVIDPE-IGASLPHNQPGEICIRGPQIMKVAELEFWSDG 73 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~------~~~~~~~vG~p~p~~~v~i~d~~-~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~ 73 (133)
+||++..++......... ......++|+|+++++++|+|++ .+++++.|++|||+|+||++++|| |++|
T Consensus 564 ~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i~G~~v~~GY----~~~p 639 (1389)
T TIGR03443 564 TTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYVRAGGLAEGY----LGLP 639 (1389)
T ss_pred CCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCcCCCCCceEEEecccccchhc----CCCh
Confidence 689886655432211100 01234689999999999999953 357899999999999999999999 9999
Q ss_pred hhhHHHHhhhhcc--------------------cCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 74 GHDEEIIKLNRLT--------------------MGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 74 ~~t~~~f~~~~~~--------------------~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
++|+++|..+... ....++||+| ||+|++++||+| |+||+|||||++|..
T Consensus 640 ~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~T---------GDlg~~~~dG~l~~~GR~dd~Iki~G~r 710 (1389)
T TIGR03443 640 ELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRT---------GDLGRYLPDGNVECCGRADDQVKIRGFR 710 (1389)
T ss_pred hHhhhhccCCcccCcccccccccccccccccccCCCccceeec---------CCceeEcCCCCEEEecccCCEEEeCcEE
Confidence 9999999632100 0012356666 999999999999 999999999999864
No 27
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.85 E-value=2.8e-21 Score=151.75 Aligned_cols=105 Identities=18% Similarity=0.324 Sum_probs=89.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..+.... .....+..++|+|+++++++|+| ++++++++|+.|||+|+|+.++.|| |++++.+.+.+
T Consensus 288 ~tE~~~~~~~~~----~~~~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~Gel~v~~~~~~~gy----~~~~~~~~~~~ 358 (487)
T PRK07638 288 ASELSFVTALVD----EESERRPNSVGRPFHNVQVRICN-EAGEEVQKGEIGTVYVKSPQFFMGY----IIGGVLARELN 358 (487)
T ss_pred CCccCceEEecc----cccCCCCCCCCcccCCcEEEEEC-CCCCCCCCCCCeEEEEecccceeee----cCCHHHHhhhc
Confidence 589876544332 12245667999999999999999 6799999999999999999999999 99988776654
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.+|||+| ||++++|++|++ ++||++|+||++|.+
T Consensus 359 ---------~~g~~~T---------GDl~~~d~~g~l~i~GR~~d~i~~~G~~ 393 (487)
T PRK07638 359 ---------ADGWMTV---------RDVGYEDEEGFIYIVGREKNMILFGGIN 393 (487)
T ss_pred ---------cCCcEec---------CccEeEcCCCeEEEEecCCCeEEeCCEE
Confidence 5789999 999999999999 999999999998864
No 28
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=99.85 E-value=7e-22 Score=152.91 Aligned_cols=108 Identities=27% Similarity=0.366 Sum_probs=95.5
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+|||+++.+++.. .++...+..++|+.+++.+..|+| +.|..+|.|+.||||+||++.|+|| |++++.|.++.
T Consensus 385 ~TEts~v~~~~~~--~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~~Gel~iRGY~tMl~Y----wg~~~kT~eti 457 (596)
T KOG1177|consen 385 LTETSPVLFMSLL--GDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLGTKGELLIRGYSTMLGY----WGEEEKTKETI 457 (596)
T ss_pred ccccCcceeeecC--CCCHHHHHhhhhhccccccccccc-CCCCccccCCCceEEEEechhheee----cCCcccchhhc
Confidence 6999988777643 344455667999999999999999 7899999999999999999999999 99999999988
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. .+.||+| ||+|.+|++|++ ++||.||||+-+|-+
T Consensus 458 ~--------~drW~~T---------GDi~~m~enG~i~iVGRskdmI~rGGEN 493 (596)
T KOG1177|consen 458 G--------NDRWYDT---------GDIAVMDENGTIEIVGRSKDMIIRGGEN 493 (596)
T ss_pred c--------cccceec---------CceEEEcCCCcEEEEEcccCeEEeCCcc
Confidence 6 5789998 999999999999 999999999987743
No 29
>PRK05691 peptide synthase; Validated
Probab=99.85 E-value=2.2e-21 Score=180.51 Aligned_cols=92 Identities=22% Similarity=0.287 Sum_probs=81.9
Q ss_pred CCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCC
Q 032813 23 SGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPG 102 (133)
Q Consensus 23 ~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~ 102 (133)
..++|+|+|+++++|+|++++++++.|+.|||||+||++|+|| |++|++|+++|... +.++||+|
T Consensus 369 ~~~~G~~~p~~~v~Ivd~~~~~~~~~g~~GEl~v~Gp~v~~GY----~~~~~~T~~~f~~~-----~g~~w~rT------ 433 (4334)
T PRK05691 369 LMSCGRSQPGHAVLIVDPQSLEVLGDNRVGEIWASGPSIAHGY----WRNPEASAKTFVEH-----DGRTWLRT------ 433 (4334)
T ss_pred eeccCCccCCCEEEEEcCCCCcCCCCCCeEEEEecCCccchhh----cCChhhhHHHhhcC-----CCCceeec------
Confidence 3589999999999999988899999999999999999999999 99999999999521 12359999
Q ss_pred CCCCcEEEEcCCCeE-EEeecCCeEEeCCCCC
Q 032813 103 RWAFDLALRTRAGYE-LKKRKKVWVRFDPLFF 133 (133)
Q Consensus 103 ~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~~ 133 (133)
||+|+++ ||+| |+||+|||||++|.++
T Consensus 434 ---GDlg~~~-dG~l~i~GR~kd~iki~G~~v 461 (4334)
T PRK05691 434 ---GDLGFLR-DGELFVTGRLKDMLIVRGHNL 461 (4334)
T ss_pred ---CCeEEEE-CCEEEEEeeecCEEEECCEec
Confidence 9999875 8999 9999999999998753
No 30
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.85 E-value=4.1e-21 Score=150.69 Aligned_cols=108 Identities=27% Similarity=0.440 Sum_probs=90.1
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.++..... ......+.+++|+|+|+++++|+| +++++++.|+.|||+|+||+++.|| +++++.+++.|
T Consensus 285 ~TE~~~~~~~~~~--~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gY----~~~~~~~~~~~ 357 (488)
T PRK09088 285 MSEAGTVFGMSVD--CDVIRAKAGAAGIPTPTVQTRVVD-DQGNDCPAGVPGELLLRGPNLSPGY----WRRPQATARAF 357 (488)
T ss_pred ccccccccccCCC--cccccccCCccccCCCCcEEEEEC-CCCCCCcCCCceEEEEECCccchhh----cCChhhhhhhh
Confidence 5888764432210 111123567899999999999999 6799999999999999999999999 99999998888
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. .++||+| ||+|++|++|++ |+||+||+||++|..
T Consensus 358 ~--------~~g~~~T---------GDl~~~~~~g~l~i~GR~~d~i~~~G~~ 393 (488)
T PRK09088 358 T--------GDGWFRT---------GDIARRDADGFFWVVDRKKDMFISGGEN 393 (488)
T ss_pred c--------CCCCeee---------cceEEEcCCCcEEEeccccceEEeCCEE
Confidence 5 5799999 999999999999 999999999998853
No 31
>PRK12316 peptide synthase; Provisional
Probab=99.85 E-value=2.2e-21 Score=181.95 Aligned_cols=117 Identities=17% Similarity=0.080 Sum_probs=92.6
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+|||+..++...............++|+|+++++++|+| ++++++|.|++|||+|+|+++++|| |++|+.|+++|
T Consensus 2296 ~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~g~~GEl~i~G~~v~~GY----~~~p~~T~~~f 2370 (5163)
T PRK12316 2296 PTEAVVTPLLWKCRPQDPCGAAYVPIGRALGNRRAYILD-ADLNLLAPGMAGELYLGGEGLARGY----LNRPGLTAERF 2370 (5163)
T ss_pred chhheeeeeeeecccccccCCCcCCcccccCCCEEEEEC-CCCCCCCCCCeeEEEecchhhcccc----cCChhhhhhhc
Confidence 689886655433211111112336899999999999999 6799999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
..++... ...+||+| ||+|++++||+| |+||+|||||++|..
T Consensus 2371 ~~~~~~~-~~~~~yrT---------GDl~~~~~dG~l~~~GR~d~~iki~G~r 2413 (5163)
T PRK12316 2371 VPDPFSA-SGERLYRT---------GDLARYRADGVVEYLGRIDHQVKIRGFR 2413 (5163)
T ss_pred cCCCCCC-CCCeeEec---------ccEEEEcCCCcEEEecCCCCeEEEcCcc
Confidence 7432111 12357777 999999999999 999999999999975
No 32
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.85 E-value=3.6e-21 Score=153.90 Aligned_cols=106 Identities=33% Similarity=0.525 Sum_probs=90.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++.... ......+++|+|+++++++|+| +++++++.|+.|||+|+|+.++.|| |++++.+.+.|
T Consensus 367 ~tE~~~~~~~~~~----~~~~~~~~~G~p~~~~~v~ivd-~~~~~~~~g~~Gel~v~g~~~~~gY----~~~~~~t~~~~ 437 (562)
T PRK12492 367 LTETSPVASTNPY----GELARLGTVGIPVPGTALKVID-DDGNELPLGERGELCIKGPQVMKGY----WQQPEATAEAL 437 (562)
T ss_pred ccccCceeeecCC----cccccCCccceecCCCEEEEEC-CCCCCCCCCCceEEEEeCCcccccc----ccCchhhhhcc
Confidence 5888765544321 1123457899999999999999 5789999999999999999999999 99999998888
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. .++||+| ||+|++|++|++ |+||+||+||+.|.+
T Consensus 438 ~--------~~g~~~T---------GD~g~~~~~G~l~i~GR~~~~i~~~G~~ 473 (562)
T PRK12492 438 D--------AEGWFKT---------GDIAVIDPDGFVRIVDRKKDLIIVSGFN 473 (562)
T ss_pred c--------CCCceec---------CcEEEECCCCeEEEecccCCeEEECCEE
Confidence 5 4689999 999999999999 999999999998753
No 33
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.85 E-value=3.4e-21 Score=153.00 Aligned_cols=84 Identities=20% Similarity=0.223 Sum_probs=73.5
Q ss_pred CCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCC
Q 032813 22 KSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEP 101 (133)
Q Consensus 22 ~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~ 101 (133)
+..++|+|+|+++++|+|++.+.+++.|+.|||+|+|++++.|| |++++.+ .++||+|
T Consensus 343 ~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~GY----~~~~~~~-------------~~~~~~T----- 400 (525)
T PRK05851 343 RHAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRGASMMSGY----LGQAPID-------------PDDWFPT----- 400 (525)
T ss_pred eeeeecCCCCCcEEEEECCCCCccCCCCCeEEEEEecCchhhcc----ccCCccC-------------CCCceec-----
Confidence 45689999999999999965456789999999999999999999 8888642 3589999
Q ss_pred CCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 102 GRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 102 ~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||+|+++ +|+| |+||+||+||++|.+
T Consensus 401 ----GDl~~~~-~G~l~~~GR~dd~i~~~G~~ 427 (525)
T PRK05851 401 ----GDLGYLV-DGGLVVCGRAKELITVAGRN 427 (525)
T ss_pred ----cceEEEE-CCEEEEEeecCCEEEECCEE
Confidence 9999997 7999 999999999998864
No 34
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.85 E-value=5.8e-21 Score=151.62 Aligned_cols=109 Identities=21% Similarity=0.328 Sum_probs=90.6
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCC-CCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVV-RNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEI 79 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~-p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~ 79 (133)
+||++..++.... .........++|.|+ +++.++|+|++++++++.|+.|||||+|++++.|| |++++.+++.
T Consensus 328 ~tE~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY----~~~~~~t~~~ 401 (540)
T PRK06164 328 SSEVQALVALQPA--TDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMRGY----LDNPDATARA 401 (540)
T ss_pred eccccceeeccCC--CCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEEEEecccccccc----cCCchhhhhc
Confidence 5888765554321 111123345678876 88999999988899999999999999999999999 9999999998
Q ss_pred HhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 80 IKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 80 f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
|. .++||+| ||+|++|++|++ ++||.||+||++|..
T Consensus 402 ~~--------~~~~~~T---------GDl~~~~~~g~l~~~GR~~~~i~~~G~~ 438 (540)
T PRK06164 402 LT--------DDGYFRT---------GDLGYTRGDGQFVYQTRMGDSLRLGGFL 438 (540)
T ss_pred cc--------CCCceec---------CCeEEEcCCceEEEEeecCCeEEECCEE
Confidence 86 5689999 999999999999 999999999999864
No 35
>PRK06178 acyl-CoA synthetase; Validated
Probab=99.85 E-value=6.8e-21 Score=152.22 Aligned_cols=109 Identities=26% Similarity=0.426 Sum_probs=89.5
Q ss_pred CCCCCcccccccCCCCC--CCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHH
Q 032813 1 MTEAGPVLSMCLGFAKQ--PFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEE 78 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~--~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~ 78 (133)
+||++..++........ .....+.++|+|+|+++++|+|++++++++.|++|||+|+|++++.|| |++++.+++
T Consensus 362 ~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g~~Gel~v~g~~v~~gY----~~~~~~~~~ 437 (567)
T PRK06178 362 MTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELLPLGAEGEIVVRTPSLLKGY----WNKPEATAE 437 (567)
T ss_pred cccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCCCcCCCCCceEEEEECCcccccc----cCChhhhhh
Confidence 57876544432211111 112345689999999999999977899999999999999999999999 999999888
Q ss_pred HHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 79 IIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 79 ~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
.| .+|||+| ||+++++++|++ |+||+||+||++|.
T Consensus 438 ~~---------~dg~~~T---------GDl~~~~~~g~l~i~GR~~d~i~~~G~ 473 (567)
T PRK06178 438 AL---------RDGWLHT---------GDIGKIDEQGFLHYLGRRKEMLKVNGM 473 (567)
T ss_pred cc---------cCCceee---------cceEEEecCCeEEEEecccccEEECCE
Confidence 77 3689999 999999999999 99999999999875
No 36
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.84 E-value=3.5e-21 Score=153.41 Aligned_cols=90 Identities=30% Similarity=0.566 Sum_probs=82.6
Q ss_pred CCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCC
Q 032813 22 KSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEP 101 (133)
Q Consensus 22 ~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~ 101 (133)
...++|+|+|+++++|+|++++++++.|+.|||+|+|++++.|| +++++.+++.|. .++||+|
T Consensus 359 ~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~~~~~gy----~~~~~~~~~~~~--------~~g~~~T----- 421 (546)
T PLN02330 359 KKNSVGFILPNLEVKFIDPDTGRSLPKNTPGELCVRSQCVMQGY----YNNKEETDRTID--------EDGWLHT----- 421 (546)
T ss_pred ccCccccccCCcEEEEEeCCCCccCCCCCceEEEEecchhhhhh----ccCccchhhhcc--------CCCceec-----
Confidence 44689999999999999977789999999999999999999999 999999888775 5789999
Q ss_pred CCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 102 GRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 102 ~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||+|++++||++ ++||.+|+||++|..
T Consensus 422 ----GD~~~~~~dG~l~~~GR~~d~i~~~G~~ 449 (546)
T PLN02330 422 ----GDIGYIDDDGDIFIVDRIKELIKYKGFQ 449 (546)
T ss_pred ----ccEEEEeCCCcEEEEechHHhhhcCCEE
Confidence 999999999999 999999999998853
No 37
>PRK12316 peptide synthase; Provisional
Probab=99.84 E-value=3e-21 Score=181.02 Aligned_cols=113 Identities=16% Similarity=0.075 Sum_probs=93.9
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+|||+..++..... .......++|+|+++++++|+| +.++++|.|++|||+|+|+.+++|| +++|++|+++|
T Consensus 3343 ~TE~~~~~~~~~~~---~~~~~~~~iG~p~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~v~~GY----~~~~~~t~~~f 3414 (5163)
T PRK12316 3343 PTEATITVTHWQCV---EEGKDAVPIGRPIANRACYILD-GSLEPVPVGALGELYLGGEGLARGY----HNRPGLTAERF 3414 (5163)
T ss_pred CCccEeeEeEEecc---CCCCCCCccceecCCCEEEEEC-CCCCCCCCCCCceEEecccccchhc----CCChhhchhhC
Confidence 68998766654321 1233457999999999999999 6899999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
..++. ....+||+| ||+|++++||.| |+||+|+|||++|..
T Consensus 3415 ~~~p~--~~~~~~y~T---------GDl~~~~~dG~l~~~GR~d~qvKi~G~r 3456 (5163)
T PRK12316 3415 VPDPF--VPGERLYRT---------GDLARYRADGVIEYIGRVDHQVKIRGFR 3456 (5163)
T ss_pred CCCCC--CCCCeeEec---------CceEEECCCCCEEEecccCCeEeeCcEe
Confidence 74432 113357777 999999999999 999999999999863
No 38
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.84 E-value=7.1e-21 Score=151.35 Aligned_cols=101 Identities=26% Similarity=0.352 Sum_probs=86.2
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcC--ccccccccccCCCchhhHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGP--QIMKVAELEFWSDGGHDEE 78 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp--~~~~GY~~~~~~~~~~t~~ 78 (133)
|||++.+.....+ ..+.++.|+|+||+++.|+|+ +|+++++++ |+|+|+.| +++++| |+||+++.+
T Consensus 324 qTEtg~~~~~~~~------~~~~g~~g~p~pG~~~~vvdd-~g~~~~~~~-G~Lvi~~~~p~~~~~~----w~d~er~~~ 391 (528)
T COG0365 324 QTETGMGFIAGRP------PVKNGSSGLPLPGYAVRRVDD-EGNPVPPGV-GELVVRLPWPGMALTY----WNDPERYKE 391 (528)
T ss_pred ccccCccccCCCC------CcCCCCCCCCCCCceeEEECC-CCCcCCCCc-eEEEEeCCCchhhhhh----hCCHHHHHH
Confidence 7999854443321 345566699999999999995 599999999 99999986 899999 999999999
Q ss_pred HHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 79 IIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 79 ~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
+|. +.||.| ||.+++|+||++ |+||.||+||+.|.
T Consensus 392 ~y~---------~~~y~t---------GD~~~~DedGy~~i~GR~DDvI~vsG~ 427 (528)
T COG0365 392 AYF---------GRWYRT---------GDWAERDEDGYFWLHGRSDDVIKVSGK 427 (528)
T ss_pred HHh---------hceeec---------CceeEEccCCCEEEEeeccceEeccCe
Confidence 986 238888 999999999999 99999999999885
No 39
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.84 E-value=9.6e-21 Score=148.47 Aligned_cols=106 Identities=32% Similarity=0.427 Sum_probs=89.4
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++... ......+.+++|+|+++++++|+| ++++.++.|+.|||+|+|++++.|| |++++.++..+
T Consensus 297 ~tE~~~~~~~~~---~~~~~~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy----~~~~~~~~~~~ 368 (496)
T PRK06839 297 MTETSPTVFMLS---EEDARRKVGSIGKPVLFCDYELID-ENKNKVEVGEVGELLIRGPNVMKEY----WNRPDATEETI 368 (496)
T ss_pred CCCCCcceEecc---cccccccCCCCcccCCCceEEEEC-CCcCCCCCCCceEEEEECCCcchhh----cCChHHHHHHH
Confidence 588876443322 112234568999999999999999 4678899999999999999999999 99999998887
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.+|||+| ||++++|++|++ ++||.+|+||++|..
T Consensus 369 ---------~~g~~~T---------GDl~~~~~~g~~~~~GR~~d~i~~~G~~ 403 (496)
T PRK06839 369 ---------QDGWLCT---------GDLARVDEDGFVYIVGRKKEMIISGGEN 403 (496)
T ss_pred ---------cCCCeee---------cceEEEcCCCcEEEeccccceEEECCEE
Confidence 4689999 999999999999 999999999998853
No 40
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.84 E-value=7.9e-21 Score=152.14 Aligned_cols=105 Identities=25% Similarity=0.400 Sum_probs=89.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEc--CccccccccccCCCchhhHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRG--PQIMKVAELEFWSDGGHDEE 78 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~g--p~~~~GY~~~~~~~~~~t~~ 78 (133)
+||++..++.... .....++++|+|+|+++++|+| +++.++++|+.|||+|++ |+++.|| |++++.+++
T Consensus 357 ~tE~~~~~~~~~~----~~~~~~~~~G~p~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~~~GY----~~~~~~~~~ 427 (570)
T PRK04319 357 MTETGGIMIANYP----AMDIKPGSMGKPLPGIEAAIVD-DQGNELPPNRMGNLAIKKGWPSMMRGI----WNNPEKYES 427 (570)
T ss_pred ecccCCEEEecCC----CCCCCCCcCcCCCCCCEEEEEC-CCCCCCCCCCceEEEEcCCCChHHhHh----cCCHHHhhh
Confidence 5898765443221 1134567999999999999999 578899999999999997 8999999 999999999
Q ss_pred HHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 79 IIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 79 ~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.|. +|||+| ||+++++++|++ ++||+||+||++|..
T Consensus 428 ~~~---------~gw~~T---------GDl~~~~~~g~l~~~GR~~d~i~~~G~~ 464 (570)
T PRK04319 428 YFA---------GDWYVS---------GDSAYMDEDGYFWFQGRVDDVIKTSGER 464 (570)
T ss_pred hhc---------CCceEe---------CcEEEECCCeeEEEEecCCCEEEECCEE
Confidence 883 689999 999999999999 999999999998853
No 41
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.84 E-value=1.3e-20 Score=148.10 Aligned_cols=105 Identities=29% Similarity=0.418 Sum_probs=89.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++.... .......+++|+|+++++++|+| +++++++.|+.|||+++|++++.|| |++++.+++.|
T Consensus 299 ~tE~~~~~~~~~~---~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~Gy----~~~~~~~~~~~ 370 (497)
T PRK06145 299 LTETCSGDTLMEA---GREIEKIGSTGRALAHVEIRIAD-GAGRWLPPNMKGEICMRGPKVTKGY----WKDPEKTAEAF 370 (497)
T ss_pred CcccCCcceeccC---ccccccCCCcccCCCCceEEEEC-CCCCCCCCCCceEEEEECcchhhhh----cCChHHHHHHH
Confidence 5888765443321 11123457899999999999999 5789999999999999999999999 99999999988
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
. ++||+| ||++++|++|++ ++||+||+||++|.
T Consensus 371 ~---------~~~~~T---------GDl~~~~~~g~l~~~GR~~~~i~~~G~ 404 (497)
T PRK06145 371 Y---------GDWFRS---------GDVGYLDEEGFLYLTDRKKDMIISGGE 404 (497)
T ss_pred h---------CCCeec---------cceEEEcCCCcEEEeccccceEEeCCe
Confidence 3 689999 999999999999 99999999999885
No 42
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.84 E-value=6.1e-21 Score=156.39 Aligned_cols=102 Identities=21% Similarity=0.277 Sum_probs=84.8
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..+.... ....+.+++|+|+++++++|+| ++++++++|+.|||+|+|++++.|| |++|+.+.
T Consensus 295 ~tE~~~~~~~~~-----~~~~~~~~iG~p~~~~~v~i~d-~~g~~~~~g~~GEl~i~g~~v~~GY----~~~~~~~~--- 361 (705)
T PRK06060 295 STEVGQTFVSNR-----VDEWRLGTLGRVLPPYEIRVVA-PDGTTAGPGVEGDLWVRGPAIAKGY----WNRPDSPV--- 361 (705)
T ss_pred ccccCceEEecc-----CCCCCcCcccccCCCcEEEEEC-CCCCCCCCCCceEEEEccchhhhhh----hCCCcccc---
Confidence 588875443321 1123467899999999999999 5799999999999999999999999 99987642
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. .++||+| ||+|++++||+| |+||+||+||++|..
T Consensus 362 ~--------~~~~~~T---------GDl~~~~~dG~l~~~GR~dd~ik~~G~~ 397 (705)
T PRK06060 362 A--------NEGWLDT---------RDRVCIDSDGWVTYRCRADDTEVIGGVN 397 (705)
T ss_pred c--------CCCcEEC---------CeeEEECCCceEEEecccCceEEECCEE
Confidence 1 3689999 999999999999 999999999999864
No 43
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.84 E-value=1.7e-20 Score=152.04 Aligned_cols=113 Identities=21% Similarity=0.246 Sum_probs=87.0
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcC---ccccccccccCCCchhhH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGP---QIMKVAELEFWSDGGHDE 77 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp---~~~~GY~~~~~~~~~~t~ 77 (133)
|||++..++..... ......+.+++|+|+|+++++|+|+++|++++.|+.|||+|+|| +++.|| |++++.+.
T Consensus 388 ~TE~~~~~~~~~~~-~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Gel~v~gp~~~g~~~~~----~~~~~~~~ 462 (628)
T TIGR02316 388 QTETGWPVLAIMPG-LDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGVLTVVPPLPPGCLSTV----WGDDARFL 462 (628)
T ss_pred ccccCceeecCCCC-CCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEEEEEecCCCccccccc----cCChHHHH
Confidence 68987544332211 11123456889999999999999965799999999999999998 345666 99998877
Q ss_pred HHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 78 EIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 78 ~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
+.+... . .++||+| ||+|++|+||+| |+||+|||||+.|..
T Consensus 463 ~~~~~~---~--~~~~~~T---------GD~g~~d~dG~l~i~GR~dd~ik~~G~r 504 (628)
T TIGR02316 463 KTYWSH---F--KRPLYSS---------FDWGIRDEDGYTFILGRTDDVINVAGHR 504 (628)
T ss_pred Hhhhhc---C--CCCEEEC---------CceEEEcCCCcEEEEEcCcceEEeCCEE
Confidence 765311 1 3578888 999999999999 999999999999863
No 44
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.84 E-value=8.3e-21 Score=151.26 Aligned_cols=109 Identities=18% Similarity=0.271 Sum_probs=85.4
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCc-cC-----CCCCCeEEEEEcCccccccccccCCCch
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGA-SL-----PHNQPGEICIRGPQIMKVAELEFWSDGG 74 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~-~~-----~~g~~Gel~i~gp~~~~GY~~~~~~~~~ 74 (133)
+||++..+.............+.+++|+|+++++++|+|+ ++. ++ +.++.|||+|+||+++.|| |++++
T Consensus 319 ~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~-~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY----~~~~~ 393 (540)
T PRK05857 319 LSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAAT-DGIGPTAPGAGPSASFGTLWIKSPANMLGY----WNNPE 393 (540)
T ss_pred CCcCCceeeecccccccccccccCCcCcccCCcEEEEECc-cccCccccccCCCCCcceEEEeCcchhhhh----hCCcc
Confidence 6898754332211100001234679999999999999995 444 33 4578999999999999999 99999
Q ss_pred hhHHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 75 HDEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 75 ~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.+++.| .+|||+| ||+|++|++|+| ++||.||+||++|..
T Consensus 394 ~t~~~~---------~~g~~~T---------GDlg~~d~~g~l~~~GR~~~~ik~~G~~ 434 (540)
T PRK05857 394 RTAEVL---------IDGWVNT---------GDLLERREDGFFYIKGRSSEMIICGGVN 434 (540)
T ss_pred chhhhc---------CCCceec---------cceEEEcCCceEEEeccccccEecCCEE
Confidence 999888 3689999 999999999999 999999999998853
No 45
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.84 E-value=6.9e-21 Score=163.93 Aligned_cols=116 Identities=16% Similarity=0.119 Sum_probs=92.6
Q ss_pred CCCCCcccccccCCCCC--CCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHH
Q 032813 1 MTEAGPVLSMCLGFAKQ--PFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEE 78 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~--~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~ 78 (133)
+||++..++........ .......++|+|+++++++|+| +.+++++.|+.|||+|+|+++++|| +++|+.|++
T Consensus 751 ~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~~~g~~Gel~i~g~~~~~GY----~~~~~~t~~ 825 (1296)
T PRK10252 751 PTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILD-ARMRPVPPGVAGDLYLTGIQLAQGY----LGRPDLTAS 825 (1296)
T ss_pred cchhhheeeeeecccccccccCCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEecccccchhh----CCCcccchh
Confidence 58987655544321111 0123456899999999999999 6899999999999999999999999 999999999
Q ss_pred HHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 79 IIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 79 ~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
+|..++.. ...+||+| ||+|++++||+| |+||+|++||++|..
T Consensus 826 ~f~~~~~~--~~~~~y~T---------GDl~~~~~~G~l~~~GR~d~~ik~~G~r 869 (1296)
T PRK10252 826 RFIADPFA--PGERMYRT---------GDVARWLDDGAVEYLGRSDDQLKIRGQR 869 (1296)
T ss_pred hcccCCCC--CCCEEEec---------CceEEEcCCCcEEEecccCCeEEEeeEE
Confidence 99743221 12357777 999999999999 999999999999863
No 46
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.83 E-value=1.7e-20 Score=147.39 Aligned_cols=105 Identities=28% Similarity=0.360 Sum_probs=90.0
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++... .......++|.|+++++++|+|++++++++.|+.|||+|+|++++.|| +++++.+++.|
T Consensus 303 ~tE~~~~~~~~~-----~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy----~~~~~~~~~~~ 373 (504)
T PRK07514 303 MTETNMNTSNPY-----DGERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKGY----WRMPEKTAEEF 373 (504)
T ss_pred cccccccccCCc-----cccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCccccc----cCCchhhhhhc
Confidence 578765433211 122345789999999999999988899999999999999999999999 99999999888
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
. .++||+| ||+++++++|++ ++||+||+||++|.
T Consensus 374 ~--------~~~~~~T---------GDl~~~~~~g~~~~~GR~~~~i~~~G~ 408 (504)
T PRK07514 374 R--------ADGFFIT---------GDLGKIDERGYVHIVGRGKDLIISGGY 408 (504)
T ss_pred c--------cCCCeee---------cceEEEcCCccEEEeccccceEEeCCe
Confidence 5 4689999 999999999999 99999999999885
No 47
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.83 E-value=1.6e-20 Score=149.82 Aligned_cols=106 Identities=28% Similarity=0.500 Sum_probs=90.6
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++.... .......++|+|+++++++|+| +++++++.|+.|||+|+|++++.|| |++++.+.+.|
T Consensus 361 ~tE~~~~~~~~~~----~~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY----~~~~~~~~~~~ 431 (557)
T PRK07059 361 LSETSPVATCNPV----DATEFSGTIGLPLPSTEVSIRD-DDGNDLPLGEPGEICIRGPQVMAGY----WNRPDETAKVM 431 (557)
T ss_pred cccccchhhcCCC----CCCCcCCcccCccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchhh----hcCHHHHhhhc
Confidence 6898765544321 1123457899999999999999 6799999999999999999999999 99999998887
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. .+|||+| ||+++++++|++ ++||++|+||++|..
T Consensus 432 ~--------~~g~~~T---------GDl~~~~~~g~~~~~GR~~~~i~~~G~~ 467 (557)
T PRK07059 432 T--------ADGFFRT---------GDVGVMDERGYTKIVDRKKDMILVSGFN 467 (557)
T ss_pred c--------cCCceec---------CcEEEEcCCCcEEEecccccceEECCEE
Confidence 5 5799999 999999999999 999999999998853
No 48
>PRK12467 peptide synthase; Provisional
Probab=99.83 E-value=9.9e-21 Score=175.37 Aligned_cols=117 Identities=15% Similarity=0.051 Sum_probs=92.6
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++...............++|+|+++++++|+| ++++++|.|++|||+|+|+++++|| +++|+.|+++|
T Consensus 1869 ~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~vp~G~~GEl~i~G~~v~~GY----l~~p~~t~~~f 1943 (3956)
T PRK12467 1869 PTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILD-ASLNPVPIGVAGELYLGGVGLARGY----LNRPALTAERF 1943 (3956)
T ss_pred CCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEeccccccccc----cCChhhhhhhC
Confidence 589986655433211111123357899999999999999 6899999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
..++.. ....+||+| ||+|++++||+| |+||+|||||++|..
T Consensus 1944 ~~~p~~-~~~~r~yrT---------GDl~~~~~dG~l~~~GR~D~qVki~G~r 1986 (3956)
T PRK12467 1944 VADPFG-TVGSRLYRT---------GDLARYRADGVIEYLGRIDHQVKIRGFR 1986 (3956)
T ss_pred cCCCCC-CCCccceec---------cceEEECCCCCEEEecccCceEEeCeEE
Confidence 743221 112346666 999999999999 999999999999863
No 49
>PRK08315 AMP-binding domain protein; Validated
Probab=99.83 E-value=1.3e-20 Score=149.94 Aligned_cols=108 Identities=31% Similarity=0.559 Sum_probs=90.4
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++.... ......+..++|+|+|+++++|+|++++++++.|+.|||+|+|++++.|| |++|+.+++.|
T Consensus 350 ~tE~~~~~~~~~~--~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~gy----~~~~~~~~~~~ 423 (559)
T PRK08315 350 MTETSPVSTQTRT--DDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGELCTRGYSVMKGY----WNDPEKTAEAI 423 (559)
T ss_pred ccccccceeecCc--ccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEEEEECchhhhhh----cCChhHHhhcC
Confidence 5788765443321 11122356799999999999999976699999999999999999999999 99999888877
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
. .++||+| ||++++|++|++ |+||.||+||++|.
T Consensus 424 ~--------~~~~~~T---------GD~~~~~~dg~~~~~GR~d~~i~~~G~ 458 (559)
T PRK08315 424 D--------ADGWMHT---------GDLAVMDEEGYVNIVGRIKDMIIRGGE 458 (559)
T ss_pred C--------CCCCEEc---------cceEEEcCCceEEEEeeccceEEECCE
Confidence 4 4689999 999999999999 99999999999875
No 50
>PRK07529 AMP-binding domain protein; Validated
Probab=99.83 E-value=1.4e-20 Score=152.78 Aligned_cols=105 Identities=25% Similarity=0.329 Sum_probs=85.0
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEE--cCCCC---ccCCCCCCeEEEEEcCccccccccccCCCchh
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVI--DPEIG---ASLPHNQPGEICIRGPQIMKVAELEFWSDGGH 75 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~--d~~~g---~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~ 75 (133)
+||++.+++.... ....+.+++|+|+|+++++|+ | +++ +++++|+.|||+|+||+++.|| ++++ .
T Consensus 367 ~TE~~~~~~~~~~----~~~~~~~svG~~~p~~~v~i~~~d-~~g~~~~~~~~g~~Gel~v~gp~v~~GY----~~~~-~ 436 (632)
T PRK07529 367 LTEATCVSSVNPP----DGERRIGSVGLRLPYQRVRVVILD-DAGRYLRDCAVDEVGVLCIAGPNVFSGY----LEAA-H 436 (632)
T ss_pred ccccCcccccCCc----cccccCCCcccccCCceEEEEEcC-CCCcccccCCCCCceEEEEECCCccccc----cCCc-c
Confidence 6898866554321 123467899999999999985 5 456 7899999999999999999999 7765 4
Q ss_pred hHHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 76 DEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 76 t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
+.+.|. .++||+| ||+|++|+||+| |+||+||+||++|.+
T Consensus 437 ~~~~~~--------~~gw~~T---------GDlg~~d~dG~l~i~GR~~d~i~~~G~~ 477 (632)
T PRK07529 437 NKGLWL--------EDGWLNT---------GDLGRIDADGYFWLTGRAKDLIIRGGHN 477 (632)
T ss_pred cccccc--------CCCceEc---------CcEEEEcCCceEEEEecccCEEEeCCEE
Confidence 445553 4689999 999999999999 999999999999864
No 51
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.83 E-value=2e-20 Score=147.97 Aligned_cols=113 Identities=18% Similarity=0.233 Sum_probs=79.5
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCC--CCeEEEEEcCcc--ccccccccCCCchhh
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHN--QPGEICIRGPQI--MKVAELEFWSDGGHD 76 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g--~~Gel~i~gp~~--~~GY~~~~~~~~~~t 76 (133)
|||++..++.... ....+.+++|+|+++++++|+| +++++++.| ++|||+|+||.+ +.|| |+++ .+
T Consensus 272 ~TE~~~~~~~~~~----~~~~~~~~~G~p~~~~~~~ivd-~~g~~~~~g~~~~Gel~v~g~~~~~~~gy----~~~~-~~ 341 (499)
T PLN03051 272 GTELASGYISSTL----LQPQAPGAFSTASLGTRFVLLN-DNGVPYPDDQPCVGEVALAPPMLGASDRL----LNAD-HD 341 (499)
T ss_pred cccccceeecccc----cCCCCCccccCCCCCceEEEEC-CCCCCCCCCCCcceEEEEecCcCCCCccc----cCCc-cc
Confidence 6897643332211 1123467899999999999999 679999988 479999999976 5799 8765 33
Q ss_pred HHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 77 EEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 77 ~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
+ .|. + ...|+. ....++|+|||+|++|+||+| |+||+|||||+.|.+
T Consensus 342 ~-~~~-~------g~~~~~-~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~ 389 (499)
T PLN03051 342 K-VYY-K------GMPMYG-SKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIK 389 (499)
T ss_pred c-eee-e------cCCccc-cCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEE
Confidence 2 332 1 011221 112233334999999999999 999999999999864
No 52
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.83 E-value=1.7e-20 Score=150.16 Aligned_cols=82 Identities=23% Similarity=0.347 Sum_probs=75.2
Q ss_pred CccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCC
Q 032813 24 GSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGR 103 (133)
Q Consensus 24 ~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~ 103 (133)
.++|+|+|+++++|++++ +|+.|||+|+||+++.|| |++|+.+++.|. .+|||+|
T Consensus 364 ~~vG~p~~~~~v~i~~~~------~g~~Gel~v~g~~~~~GY----~~~~~~t~~~~~--------~~g~~~T------- 418 (563)
T PLN02860 364 VCVGKPAPHVELKIGLDE------SSRVGRILTRGPHVMLGY----WGQNSETASVLS--------NDGWLDT------- 418 (563)
T ss_pred cccCCccCCcEEEEecCC------CCceeEEEEecCcccccc----cCCccccchhcc--------CCCeEEc-------
Confidence 479999999999999843 688999999999999999 999999998885 5799999
Q ss_pred CCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 104 WAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 104 ~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||+|++|++|+| |+||+||+||++|.+
T Consensus 419 --GDl~~~d~dG~l~~~GR~~d~i~~~G~~ 446 (563)
T PLN02860 419 --GDIGWIDKAGNLWLIGRSNDRIKTGGEN 446 (563)
T ss_pred --cceEEEcCCCCEEEeecccceeEECCEE
Confidence 999999999999 999999999999864
No 53
>PRK13390 acyl-CoA synthetase; Provisional
Probab=99.83 E-value=2.7e-20 Score=146.58 Aligned_cols=107 Identities=21% Similarity=0.228 Sum_probs=88.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.++.... .......+++|+|+++ .++|+| ++++++++|++|||+|++++++.|| |++|+.+++.|
T Consensus 304 ~tE~~~~~~~~~----~~~~~~~~~~G~~~~g-~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy----~~~~~~t~~~~ 373 (501)
T PRK13390 304 STEAHGMTFIDS----PDWLAHPGSVGRSVLG-DLHICD-DDGNELPAGRIGTVYFERDRLPFRY----LNDPEKTAAAQ 373 (501)
T ss_pred ccccCceEEecc----hhhccCCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecCCccccc----cCChhhhHHhh
Confidence 578765433221 1112346789999999 799999 6799999999999999999999999 99999999887
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
... .++|++| ||+|++|++|++ ++||.||+||++|..
T Consensus 374 ~~~------~~~w~~t---------GDl~~~~~dg~l~~~gR~~~~i~~~G~~ 411 (501)
T PRK13390 374 HPA------HPFWTTV---------GDLGSVDEDGYLYLADRKSFMIISGGVN 411 (501)
T ss_pred ccC------CCceEEc---------CceEEECCCCeEEEeeccccceeECCee
Confidence 421 2579999 999999999999 999999999999864
No 54
>PRK05691 peptide synthase; Validated
Probab=99.83 E-value=1.6e-20 Score=174.75 Aligned_cols=115 Identities=17% Similarity=0.086 Sum_probs=92.5
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+|||+..+++.... .........++|+|+++++++|+| +.++++|.|.+|||+|+|+.+++|| +++|++|+++|
T Consensus 4018 ~TE~t~~~~~~~~~-~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~~p~g~~GEL~i~G~~v~~GY----~~~~~~t~~~f 4091 (4334)
T PRK05691 4018 PAECSDDVAFFRVD-LASTRGSYLPIGSPTDNNRLYLLD-EALELVPLGAVGELCVAGTGVGRGY----VGDPLRTALAF 4091 (4334)
T ss_pred CccceeEEEEEEcc-cccccCCcCCCCCccCCCEEEEEC-CCCCCCCCCCceEEEEecccccccc----cCCcccchhhc
Confidence 58998766654321 111122346899999999999999 7899999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
.+++... ...+||+| ||++++++||+| |+||+|+|||++|.
T Consensus 4092 ~~~p~~~-~~~~~yrT---------GDl~~~~~dG~l~~~GR~d~qvki~G~ 4133 (4334)
T PRK05691 4092 VPHPFGA-PGERLYRT---------GDLARRRSDGVLEYVGRIDHQVKIRGY 4133 (4334)
T ss_pred ccCCCCC-CCceeecc---------CcceeecCCCcEEEecccCCcEEeceE
Confidence 8543211 12345555 999999999999 99999999999986
No 55
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.82 E-value=3.4e-20 Score=146.41 Aligned_cols=105 Identities=22% Similarity=0.239 Sum_probs=89.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEc---CccccccccccCCCchhhH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRG---PQIMKVAELEFWSDGGHDE 77 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~g---p~~~~GY~~~~~~~~~~t~ 77 (133)
+||++..++.... .......++|+|+++++++|+| +++++++.|+.|||+++| ++++.|| |++++.++
T Consensus 321 ~tE~~~~~~~~~~----~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~~~gy----~~~~~~~~ 391 (517)
T PRK08008 321 MTETIVGIIGDRP----GDKRRWPSIGRPGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEY----YLDPKATA 391 (517)
T ss_pred ccccccccccCCc----cccccCCccccCCCCcEEEEEC-CCCCCCCCCCcceEEEeCCCCcchhhhH----hCChHHHh
Confidence 5888754443321 1123457899999999999999 679999999999999997 6899999 99999999
Q ss_pred HHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 78 EIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 78 ~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
+.|. .+|||+| ||+|++|++|++ ++||+||+||++|.
T Consensus 392 ~~~~--------~~g~~~T---------GDl~~~~~~g~~~~~GR~~d~i~~~G~ 429 (517)
T PRK08008 392 KVLE--------ADGWLHT---------GDTGYVDEEGFFYFVDRRCNMIKRGGE 429 (517)
T ss_pred hccc--------CCCCeec---------cceEEECCCCcEEEeecccceEEeCCE
Confidence 9886 5789999 999999999999 99999999999874
No 56
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.82 E-value=2.2e-20 Score=148.76 Aligned_cols=102 Identities=17% Similarity=0.151 Sum_probs=84.2
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..+.... .+....+.++|+|+++++++|+| +++++++.|+.|||+|+|++++.|| +++++. + +
T Consensus 357 ~TE~~~~~~~~~----~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY----~~~~~~--~-~ 424 (549)
T PRK07788 357 STEVAFATIATP----EDLAEAPGTVGRPPKGVTVKILD-ENGNEVPRGVVGRIFVGNGFPFEGY----TDGRDK--Q-I 424 (549)
T ss_pred cchhchhhccCh----hhhhhcCCCcccCCCCcEEEEEC-CCcCCCCCCCeEEEEEeCCCccccc----cCCCcc--c-c
Confidence 589875443321 11224567899999999999999 6799999999999999999999999 887765 1 1
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.+|||+| ||++++|++|++ |+||+||+||++|.+
T Consensus 425 ---------~~g~~~T---------GDl~~~~~~g~l~~~GR~dd~i~~~G~~ 459 (549)
T PRK07788 425 ---------IDGLLSS---------GDVGYFDEDGLLFVDGRDDDMIVSGGEN 459 (549)
T ss_pred ---------cCCceec---------CceEEEcCCCCEEEeccCcceEEECCEE
Confidence 3589999 999999999999 999999999999863
No 57
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.82 E-value=4e-20 Score=146.89 Aligned_cols=108 Identities=21% Similarity=0.259 Sum_probs=85.6
Q ss_pred CCCCCcccccccCCC---CCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhH
Q 032813 1 MTEAGPVLSMCLGFA---KQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDE 77 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~---~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~ 77 (133)
+||++..++...... ........+.+|+ .++++++|+| ++++++++|+.|||+|+|+.+++|| |++++.++
T Consensus 329 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~v~~gY----~~~~~~t~ 402 (534)
T PRK05852 329 MTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVG-SDGLPLPAGAVGEVWLRGTTVVRGY----LGDPTITA 402 (534)
T ss_pred ccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEEC-CCCCCCCCCCceEEEEecCcccchh----cCCcccch
Confidence 588876554332100 0001112334444 6999999999 5789999999999999999999999 99999999
Q ss_pred HHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 78 EIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 78 ~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
+.| .++||+| ||+|++|+||++ +.||++|+||++|..
T Consensus 403 ~~~---------~~g~~~T---------GD~~~~d~dG~l~~~gR~~d~i~~~G~~ 440 (534)
T PRK05852 403 ANF---------TDGWLRT---------GDLGSLSAAGDLSIRGRIKELINRGGEK 440 (534)
T ss_pred hhh---------cCCCccc---------CceEEEeCCCcEEEEecchhhEEECCEE
Confidence 988 4689999 999999999999 999999999998853
No 58
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.82 E-value=5.1e-20 Score=145.06 Aligned_cols=106 Identities=29% Similarity=0.428 Sum_probs=90.7
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++... ........+++|+|+++++++|+| +++++++.|+.|||+++|+.++.|| +++++.+++.|
T Consensus 321 ~tE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gei~v~~~~~~~~y----~~~~~~~~~~~ 392 (523)
T PRK08316 321 QTEIAPLATVLG---PEEHLRRPGSAGRPVLNVETRVVD-DDGNDVAPGEVGEIVHRSPQLMLGY----WDDPEKTAEAF 392 (523)
T ss_pred ccccCccccccC---ccccccccCCcccCCCCcEEEEEc-CCCCCCCCCCcceEEEECCchhhhh----cCCHHHHHHHh
Confidence 588876555432 112234567999999999999999 5799999999999999999999999 99999999888
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.++||+| ||+|++++||.+ ++||.||+||++|..
T Consensus 393 ---------~~~~~~T---------GDl~~~~~~g~l~i~gR~~~~i~~~G~~ 427 (523)
T PRK08316 393 ---------RGGWFHS---------GDLGVMDEEGYITVVDRKKDMIKTGGEN 427 (523)
T ss_pred ---------hCCCeec---------cceEEEcCCceEEEecccccEEEeCCeE
Confidence 4699999 999999999999 999999999998853
No 59
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.82 E-value=6.1e-20 Score=146.43 Aligned_cols=103 Identities=23% Similarity=0.268 Sum_probs=89.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcC---ccccccccccCCCchhhH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGP---QIMKVAELEFWSDGGHDE 77 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp---~~~~GY~~~~~~~~~~t~ 77 (133)
+||++.+++... .....+++|.|+++++++|+| +++++++.|+.|||+|+++ +++.|| +++++.+.
T Consensus 326 ~tE~~~~~~~~~------~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gei~v~~~~~~~~~~GY----~~~~~~~~ 394 (542)
T PRK06155 326 STETNFVIAVTH------GSQRPGSMGRLAPGFEARVVD-EHDQELPDGEPGELLLRADEPFAFATGY----FGMPEKTV 394 (542)
T ss_pred ccccCccccCCC------CCCCCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCCccccchhh----cCCHHHHH
Confidence 589876554321 134567899999999999999 5799999999999999998 699999 99999998
Q ss_pred HHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 78 EIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 78 ~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
+.| .++||+| ||+|++++||++ |+||+||+||++|..
T Consensus 395 ~~~---------~~~~~~T---------GD~~~~~~dG~l~i~GR~~d~i~~~G~~ 432 (542)
T PRK06155 395 EAW---------RNLWFHT---------GDRVVRDADGWFRFVDRIKDAIRRRGEN 432 (542)
T ss_pred Hhh---------cCCcEec---------cceEEEcCCceEEEEecCCCEEEeCCEE
Confidence 888 4799999 999999999999 999999999999863
No 60
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.82 E-value=3.5e-20 Score=147.45 Aligned_cols=90 Identities=21% Similarity=0.265 Sum_probs=82.6
Q ss_pred CCCCccccCC-CCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccC
Q 032813 21 TKSGSCGTVV-RNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQA 99 (133)
Q Consensus 21 ~~~~~vG~p~-p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~ 99 (133)
....++|+|+ |++.++|+| +++++++.|+.|||+|+|+.++.|| |++++.+++.|. .++||+|
T Consensus 350 ~~~~~~G~p~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~GY----~~~~~~t~~~~~--------~d~~~~T--- 413 (536)
T PRK10946 350 RIFTTQGRPMSPDDEVWVAD-ADGNPLPQGEVGRLMTRGPYTFRGY----YKSPQHNASAFD--------ANGFYCS--- 413 (536)
T ss_pred cccccCCcccCCCceEEEEC-CCCCCCCCCCccEEEEecCccchhh----cCCcccchhhcc--------cCCceec---
Confidence 3457899999 799999999 6799999999999999999999999 999999999886 5789999
Q ss_pred CCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 100 EPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 100 ~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||+|++|++|++ ++||.+|+||++|..
T Consensus 414 ------GDl~~~d~~G~l~~~gR~~d~i~~~G~~ 441 (536)
T PRK10946 414 ------GDLVSIDPDGYITVVGREKDQINRGGEK 441 (536)
T ss_pred ------CceEEECCCCcEEEeccccceeecCCEE
Confidence 999999999999 999999999998853
No 61
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.82 E-value=5.3e-20 Score=145.79 Aligned_cols=109 Identities=19% Similarity=0.320 Sum_probs=90.0
Q ss_pred CCCCCcccccccCCC---CCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhH
Q 032813 1 MTEAGPVLSMCLGFA---KQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDE 77 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~---~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~ 77 (133)
+||++..++...... ........+++|+|+++++++|+| +++++++.|+.|||+|+|+.++.|| |++++.++
T Consensus 314 ~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~gy----~~~~~~~~ 388 (528)
T PRK07470 314 LGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-DEGRELPPGETGEICVIGPAVFAGY----YNNPEANA 388 (528)
T ss_pred CcccCCceeecchhhccccccccceeeccCcccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchhh----cCCHHHHH
Confidence 588876554432110 000123457899999999999999 5799999999999999999999999 99999998
Q ss_pred HHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 78 EIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 78 ~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
+.| .++||+| ||+++++++|++ ++||+||+||++|..
T Consensus 389 ~~~---------~~~~~~T---------GDl~~~~~~g~l~~~GR~dd~i~~~G~~ 426 (528)
T PRK07470 389 KAF---------RDGWFRT---------GDLGHLDARGFLYITGRASDMYISGGSN 426 (528)
T ss_pred hhh---------cCCcEec---------ceeEEEccCCeEEEeCCccceEEeCCEE
Confidence 888 4689999 999999999999 999999999999863
No 62
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.82 E-value=6.2e-20 Score=143.60 Aligned_cols=105 Identities=24% Similarity=0.330 Sum_probs=88.0
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++... ........+++|+|+++++++|++ + +++++.|+.|||+|+||.++.|| +++++.++..|
T Consensus 287 ~tE~~~~~~~~~---~~~~~~~~~~vG~p~~~~~~~i~~-~-~~~~~~g~~Gel~v~g~~~~~gy----~~~~~~~~~~~ 357 (483)
T PRK03640 287 MTETASQIVTLS---PEDALTKLGSAGKPLFPCELKIEK-D-GVVVPPFEEGEIVVKGPNVTKGY----LNREDATRETF 357 (483)
T ss_pred cCcccccccccC---cccccccCCCcccccCCcEEEEec-C-CCcCCCCCceEEEEECcchhhhh----cCCHHHHHHHH
Confidence 578765433322 111234568999999999999998 3 58999999999999999999999 99999999888
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.++||+| ||++++++||++ ++||+||+||++|..
T Consensus 358 ---------~~~~~~t---------GDl~~~~~~g~l~~~GR~~~~i~~~G~~ 392 (483)
T PRK03640 358 ---------QDGWFKT---------GDIGYLDEEGFLYVLDRRSDLIISGGEN 392 (483)
T ss_pred ---------hcCCeec---------cceEEEcCCCCEEEeecccCeEEeCCEE
Confidence 3689999 999999999999 999999999998863
No 63
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.81 E-value=7.7e-20 Score=145.23 Aligned_cols=109 Identities=24% Similarity=0.260 Sum_probs=90.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..+..... ......++|+|+++++++|+|++++++++.|+.|||+|+|++++.|| +++++.+++.|
T Consensus 339 ~tE~~~~~~~~~~-----~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY----~~~~~~t~~~f 409 (546)
T PRK08314 339 LTETMAQTHSNPP-----DRPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQVFKGY----WNRPEATAEAF 409 (546)
T ss_pred ccccccceecCCC-----cCCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCchhccc----cCChhHhhhhh
Confidence 5888765443321 12345789999999999999977899999999999999999999999 99999998888
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
... ...+||+| ||+|+++++|+| ++||+||+||++|..
T Consensus 410 ~~~-----~~~~~~~T---------GDl~~~~~~g~l~~~GR~~d~i~~~G~~ 448 (546)
T PRK08314 410 IEI-----DGKRFFRT---------GDLGRMDEEGYFFITDRLKRMINASGFK 448 (546)
T ss_pred hhc-----CCCceEec---------CCEEEEcCCCcEEEEecchhhEEeCCEE
Confidence 521 12369999 999999999999 999999999999863
No 64
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.81 E-value=4.4e-20 Score=147.05 Aligned_cols=101 Identities=16% Similarity=0.221 Sum_probs=83.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++... ......++++|+|+++++++|+| +++++++.|+.|||+|+||+++.|| + ++.+.. |
T Consensus 346 ~TE~~~~~~~~~----~~~~~~~~~vG~p~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~~~~gY----~--~~~~~~-~ 413 (537)
T PRK13382 346 ATEAGMIATATP----ADLRAAPDTAGRPAEGTEIRILD-QDFREVPTGEVGTIFVRNDTQFDGY----T--SGSTKD-F 413 (537)
T ss_pred ccccCcceecCh----hHhccCCCCccccCcCcEEEEEC-CCCCCCCCCCeeEEEEEcCCcccCc----c--ccchhh-c
Confidence 689876554332 11234567999999999999999 5799999999999999999999999 6 444433 3
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
.+|||+| ||++++|++|++ |+||+||+||++|.
T Consensus 414 ---------~~g~~~T---------GDl~~~~~~g~l~~~GR~dd~ik~~G~ 447 (537)
T PRK13382 414 ---------HDGFMAS---------GDVGYLDENGRLFVVGRDDEMIVSGGE 447 (537)
T ss_pred ---------cCCCEee---------CceEEEeCCCcEEEeccccceeEECCE
Confidence 3589999 999999999999 99999999999885
No 65
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.81 E-value=5.7e-20 Score=146.47 Aligned_cols=104 Identities=28% Similarity=0.294 Sum_probs=86.1
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++... .........++|+|+++++++|+| +++++++.|+.|||+|+|++++.|| +++|+.++..
T Consensus 346 ~TE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY----~~~~~~t~~~- 416 (547)
T PRK13295 346 MTENGAVTLTKL---DDPDERASTTDGCPLPGVEVRVVD-ADGAPLPAGQIGRLQVRGCSNFGGY----LKRPQLNGTD- 416 (547)
T ss_pred CCCCCCeeeccC---CCcchhccCccccccCCcEEEEEC-CCCCCCCCCCCCeEEEEcCcccccc----cCCccccccC-
Confidence 689876543322 111123356899999999999999 5789999999999999999999999 9999887653
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
.+|||+| ||+|+++++|++ ++||.||+||++|.
T Consensus 417 ---------~~g~~~T---------GD~~~~~~~g~l~~~gR~~~~i~~~G~ 450 (547)
T PRK13295 417 ---------ADGWFDT---------GDLARIDADGYIRISGRSKDVIIRGGE 450 (547)
T ss_pred ---------CCCCeec---------ceEEEEcCCceEEEEeccCCeEEECCE
Confidence 2579999 999999999999 99999999999885
No 66
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.81 E-value=8.7e-20 Score=144.73 Aligned_cols=89 Identities=20% Similarity=0.280 Sum_probs=81.5
Q ss_pred CCCCccccCC-CCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccC
Q 032813 21 TKSGSCGTVV-RNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQA 99 (133)
Q Consensus 21 ~~~~~vG~p~-p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~ 99 (133)
....++|+|+ ++..++|+| +++++++.|+.|||+|+|+.++.|| |++++.+++.|. .++||+|
T Consensus 349 ~~~~~~G~~~~~~~~v~i~d-~~g~~~~~g~~Gei~v~g~~~~~gY----~~~~~~~~~~~~--------~dg~~~T--- 412 (527)
T TIGR02275 349 IIFTTQGRPMSPDDEVRVVD-DHGNPVAPGETGMLLTRGPYTFRGY----YKAPEHNAAAFD--------AEGFYYT--- 412 (527)
T ss_pred cccccCCCCCCCCceEEEEC-CCCCCCCCCCceEEEecCCccchhh----cCChhHhHhhcC--------cCCCEEc---
Confidence 3456899999 488999999 6799999999999999999999999 999999998886 5789999
Q ss_pred CCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 100 EPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 100 ~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
||+++++++|++ ++||.||+||++|.
T Consensus 413 ------GDl~~~~~~g~l~~~gR~~d~i~~~G~ 439 (527)
T TIGR02275 413 ------GDLVRLTPEGYIVVVGRAKDQINRGGE 439 (527)
T ss_pred ------CceEEEcCCccEEEEecccceeecCCE
Confidence 999999999999 99999999999885
No 67
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.81 E-value=8.1e-20 Score=145.74 Aligned_cols=105 Identities=26% Similarity=0.478 Sum_probs=89.7
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++.... ......+++|+|++++.++|+| +++++++.|+.|||+|+|+.++.|| |++++.+++.|
T Consensus 363 ~tE~~~~~~~~~~----~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy----~~~~~~~~~~~ 433 (560)
T PRK08751 363 LTETSPAACINPL----TLKEYNGSIGLPIPSTDACIKD-DAGTVLAIGEIGELCIKGPQVMKGY----WKRPEETAKVM 433 (560)
T ss_pred cccCCCceecccc----cccccCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCccchhh----cCChhhhhhcc
Confidence 5888765544321 1123457899999999999999 6799999999999999999999999 99999998887
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
. .+|||+| ||++++|++|++ ++||.+|+||++|.
T Consensus 434 ~--------~~g~~~T---------GD~~~~~~~g~l~i~GR~~d~i~~~G~ 468 (560)
T PRK08751 434 D--------ADGWLHT---------GDIARMDEQGFVYIVDRKKDMILVSGF 468 (560)
T ss_pred c--------cCCCccc---------cceEEEcCCceEEEEeechhheeECCE
Confidence 5 4689999 999999999999 99999999999885
No 68
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.81 E-value=1.1e-19 Score=147.12 Aligned_cols=113 Identities=22% Similarity=0.257 Sum_probs=87.0
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcC---ccccccccccCCCchhhH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGP---QIMKVAELEFWSDGGHDE 77 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp---~~~~GY~~~~~~~~~~t~ 77 (133)
+||++..++..... ......+.+++|+|+|+++++|+|+++|++++.|+.|||+|+|| .++.+| |++++.+.
T Consensus 389 ~TE~~~~~~~~~~~-~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Gel~i~gp~~~~~~~~~----~~~~~~~~ 463 (629)
T PRK10524 389 QTETGWPILAIARG-VEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGVLVIEGPLPPGCMQTV----WGDDDRFV 463 (629)
T ss_pred cccccchhhcCCCC-cccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEEEEEcCCCChhhcCCc----cCChHHHH
Confidence 68987433322111 11123456899999999999999954899999999999999998 466777 99998877
Q ss_pred HHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 78 EIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 78 ~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
+.+... . .++||+| ||+|++|+||++ |+||+||+||+.|..
T Consensus 464 ~~~~~~---~--~~~~~~T---------GDl~~~d~dG~l~i~GR~dd~i~~~G~r 505 (629)
T PRK10524 464 KTYWSL---F--GRQVYST---------FDWGIRDADGYYFILGRTDDVINVAGHR 505 (629)
T ss_pred Hhhhcc---C--CCcEEEc---------CCcEEEcCCCcEEEEEEecCeEEeCCEE
Confidence 665311 1 3478998 999999999999 999999999999864
No 69
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.81 E-value=1.2e-19 Score=144.37 Aligned_cols=107 Identities=31% Similarity=0.480 Sum_probs=90.1
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++.... ......+..++|+|+|++.++|+|+ ++++++.|+.|||+|+|+.++.|| +++++.+.+.|
T Consensus 352 ~tE~~~~~~~~~~--~~~~~~~~~~vG~p~~~~~~~i~d~-~~~~~~~g~~Gel~v~g~~~~~gy----~~~~~~~~~~~ 424 (558)
T PRK12583 352 MTETSPVSLQTTA--ADDLERRVETVGRTQPHLEVKVVDP-DGATVPRGEIGELCTRGYSVMKGY----WNNPEATAESI 424 (558)
T ss_pred ccccccceeccCc--ccccccccCCCCccCCCCeEEEECC-CCCCCCCCCeeEEEEEeCccchhh----cCChHHHHhhc
Confidence 5888866554321 1122345679999999999999996 499999999999999999999999 99999988877
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
. .++||+| ||+++++++|++ ++||+||+||++|.
T Consensus 425 ~--------~~~~~~T---------GDl~~~~~dg~l~i~GR~~~~i~~~G~ 459 (558)
T PRK12583 425 D--------EDGWMHT---------GDLATMDEQGYVRIVGRSKDMIIRGGE 459 (558)
T ss_pred C--------CCCCeec---------cceEEECCCccEEEEecccceeEECCE
Confidence 4 4689999 999999999999 99999999999875
No 70
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.81 E-value=1e-19 Score=142.99 Aligned_cols=112 Identities=19% Similarity=0.111 Sum_probs=88.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++...............++|+|+|+++++|+| ++++++++|+.|||+|+|++++.|| +++++.+.+.|
T Consensus 293 ~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy----~~~~~~~~~~~ 367 (502)
T TIGR01734 293 PTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMD-EEGEPLPEGEKGEIVIVGPSVSKGY----LNNPEKTAEAF 367 (502)
T ss_pred CCcceEEEEEEEccccccccCCccccccccCCCEEEEEC-CCCCCCCCCCeeEEEEccccccccc----cCCcccchHhh
Confidence 588765443322111111223446899999999999999 5689999999999999999999999 99999998887
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
... ...+||+| ||+|++|++ +| ++||.+|+||++|.+
T Consensus 368 ~~~-----~~~~~~~T---------GDlg~~~~~-~l~i~GR~~d~i~~~G~~ 405 (502)
T TIGR01734 368 FSH-----EGQPAYRT---------GDAGTITDG-QLFYQGRLDFQIKLHGYR 405 (502)
T ss_pred eeC-----CCcEEEEC---------CCEEEEECC-EEEEeccccCeEEECcEE
Confidence 411 13469999 999999987 88 999999999999864
No 71
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.81 E-value=1.2e-19 Score=144.34 Aligned_cols=105 Identities=26% Similarity=0.310 Sum_probs=85.5
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++... .........++|+|+|+++++|+| +++++++.|+.|||+|+|++++.|| +++|+.++.
T Consensus 344 ~tE~~~~~~~~~---~~~~~~~~~~~G~~~~g~~v~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy----~~~~~~~~~-- 413 (538)
T TIGR03208 344 MTENGAVTVTEP---DDALEKASTTDGRPLPGVEVKVID-ANGAKLSQGETGRLLVRGCSNFGGY----LKRPHLNST-- 413 (538)
T ss_pred cCcCCCccccCc---ccchhhccCcccccCCCCEEEEEC-CCCCCCcCCCCcEEEEecCcccccc----cCCcccccc--
Confidence 589876544332 111122346899999999999999 6789999999999999999999999 999887642
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. .++||+| ||+|++|++|+| ++||.||+||++|..
T Consensus 414 ~--------~~~~~~T---------GD~~~~~~~g~l~~~gR~~~~i~~~G~~ 449 (538)
T TIGR03208 414 D--------AEGWFDT---------GDLAFQDAEGYIRINGRSKDVIIRGGEN 449 (538)
T ss_pred c--------CCCceec---------cceEEECCCCcEEEEeccCceEEECCEE
Confidence 1 4689999 999999999999 999999999998853
No 72
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.81 E-value=1.4e-19 Score=142.27 Aligned_cols=108 Identities=28% Similarity=0.428 Sum_probs=90.6
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++++++.+.. .......+.++|+|+++++++|+| +++++++.|+.|||+|+|+.++.|| +++++.+...|
T Consensus 316 ~tE~~~~~~~~~~--~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy----~~~~~~~~~~~ 388 (513)
T PRK07656 316 LSEASGVTTFNRL--DDDRKTVAGTIGTAIAGVENKIVN-ELGEEVPVGEVGELLVRGPNVMKGY----YDDPEATAAAI 388 (513)
T ss_pred cccCCCceeecCc--cccccccCCCccccCCCcEEEEEC-CCCCCCCCCCceEEEEEcchhhhhh----cCCHHHHhhhh
Confidence 5898766655432 111112367899999999999999 5799999999999999999999999 99999888877
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. .++||+| ||+|+++++|++ ++||.||+||++|..
T Consensus 389 ~--------~~~~~~t---------GDl~~~~~~g~~~~~GR~~d~i~~~G~~ 424 (513)
T PRK07656 389 D--------ADGWLHT---------GDLGRLDEEGYLYIVDRKKDMFIVGGFN 424 (513)
T ss_pred c--------cCCceec---------cceEEEcCCeeEEEEecccceEEeCCEE
Confidence 4 4789999 999999999999 999999999998863
No 73
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.81 E-value=1.1e-19 Score=145.42 Aligned_cols=105 Identities=23% Similarity=0.445 Sum_probs=89.4
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCC-CccCCCCCCeEEEEEcCccccccccccCCCchhhHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEI-GASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEI 79 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~-g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~ 79 (133)
+||++.+++.... ....+.+++|+|+|++.++|+|+++ +++++.|+.|||+|+|+.++.|| +++++.+++.
T Consensus 370 ~TE~~~~~~~~~~----~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v~~~~~~~gy----~~~~~~~~~~ 441 (573)
T PRK05605 370 LTETSPIIVGNPM----SDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLVRGPQVFKGY----WNRPEETAKS 441 (573)
T ss_pred cchhchhhhcCCc----ccCCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEEecCchhhhh----cCChhHhhhc
Confidence 5898766554321 1134567999999999999999655 68999999999999999999999 9999999888
Q ss_pred HhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 80 IKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 80 f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
|. +|||+| ||++++|++|++ ++||+||+||++|.
T Consensus 442 ~~---------~g~~~T---------GD~~~~~~~g~l~i~gR~dd~i~~~G~ 476 (573)
T PRK05605 442 FL---------DGWFRT---------GDVVVMEEDGFIRIVDRIKELIITGGF 476 (573)
T ss_pred cc---------CCCccc---------CCEEEEcCCCcEEEEeccccceeeCCE
Confidence 83 579999 999999999999 99999999999875
No 74
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.81 E-value=1.5e-19 Score=143.93 Aligned_cols=105 Identities=30% Similarity=0.430 Sum_probs=89.1
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+.+... .........++|+|++++.++|+| +++++++.|+.|||+++|+.++.|| +++++.++..|
T Consensus 325 ~tE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy----~~~~~~~~~~f 396 (542)
T PRK07786 325 QTEMSPVTCMLL---GEDAIRKLGSVGKVIPTVAARVVD-ENMNDVPVGEVGEIVYRAPTLMSGY----WNNPEATAEAF 396 (542)
T ss_pred ccccccceEecC---cccccccCCCccccCCCceEEEEC-CCCCCCcCCCceEEEEEChhhhhhh----cCCHHHHHHHh
Confidence 578775444321 111224557899999999999999 6789999999999999999999999 99999999888
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
.++||+| ||+++++++|++ ++||.||+||++|.
T Consensus 397 ---------~~~~~~T---------GDl~~~~~~g~~~i~GR~~d~i~~~G~ 430 (542)
T PRK07786 397 ---------AGGWFHS---------GDLVRQDEEGYVWVVDRKKDMIISGGE 430 (542)
T ss_pred ---------hCCcccc---------cceEEEcCCceEEEEecccceEEeCCE
Confidence 4689999 999999999999 99999999999875
No 75
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.81 E-value=8.1e-20 Score=145.38 Aligned_cols=107 Identities=26% Similarity=0.330 Sum_probs=89.4
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+..... .........++|+|++++.++|+| +++++++.|+.|||+++|++++.|| +++++.+...|
T Consensus 335 ~TE~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy----~~~~~~~~~~~ 406 (547)
T PRK06087 335 STESSPHAVVNL---DDPLSRFMHTDGYAAAGVEIKVVD-EARKTLPPGCEGEEASRGPNVFMGY----LDEPELTARAL 406 (547)
T ss_pred ccccCCccccCC---CcchhhcCCcCCccCCCceEEEEc-CCCCCCcCCCcceEEEecccccccc----cCCHHHHHHHh
Confidence 588876544321 111122346789999999999999 6789999999999999999999999 99999998888
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. .++||+| ||++++|++|++ ++||.+|+||++|..
T Consensus 407 ~--------~~g~~~T---------GDl~~~~~~g~l~i~GR~~d~i~~~G~~ 442 (547)
T PRK06087 407 D--------EEGWYYS---------GDLCRMDEAGYIKITGRKKDIIVRGGEN 442 (547)
T ss_pred C--------CCCCcCc---------CceEEECCCCCEEEEecchhhhhcCCEE
Confidence 5 5689999 999999999999 999999999998853
No 76
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.81 E-value=1.6e-19 Score=141.45 Aligned_cols=104 Identities=22% Similarity=0.327 Sum_probs=86.1
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCC-CCC-CeEEEEEcCccccccccccCCCchhhHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLP-HNQ-PGEICIRGPQIMKVAELEFWSDGGHDEE 78 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~-~g~-~Gel~i~gp~~~~GY~~~~~~~~~~t~~ 78 (133)
+||++..++... .....+.++|+|+++++++|+| +++++++ .++ +|||+|+|++++.|| +++++.+++
T Consensus 275 ~tE~~~~~~~~~-----~~~~~~~~vG~~~~g~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy----~~~~~~t~~ 344 (471)
T PRK07787 275 MTETLITLSTRA-----DGERRPGWVGLPLAGVETRLVD-EDGGPVPHDGETVGELQVRGPTLFDGY----LNRPDATAA 344 (471)
T ss_pred ccccCcceecCC-----CCcccCCcccccCCCcEEEEEC-CCCCCCCCCCCCceEEEEECcccchhh----cCChhhchh
Confidence 588875433321 1234567899999999999999 4688887 344 799999999999999 999999998
Q ss_pred HHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeec-CCeEEeCCC
Q 032813 79 IIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRK-KVWVRFDPL 131 (133)
Q Consensus 79 ~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~-dd~Iki~~~ 131 (133)
.|. .++||+| ||+|++++||++ ++||+ |++||++|.
T Consensus 345 ~~~--------~~~~~~T---------GDlg~~~~dg~l~~~GR~~d~~i~~~G~ 382 (471)
T PRK07787 345 AFT--------ADGWFRT---------GDVAVVDPDGMHRIVGRESTDLIKSGGY 382 (471)
T ss_pred ccc--------CCCceec---------CceEEEcCCCCEEEeCCCCceeEeeCCE
Confidence 885 5789999 999999999999 99996 899999885
No 77
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.80 E-value=8.4e-20 Score=147.70 Aligned_cols=97 Identities=18% Similarity=0.221 Sum_probs=80.0
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
|||++.+++.... .....+++|+|+|+++++|+|+ +..|||+|+||+++.|| |++|+.|++.|
T Consensus 374 ~TE~~~~~~~~~~-----~~~~~~svG~p~pg~~v~i~d~--------~~~GEi~vrg~~v~~GY----~~~p~~t~~~~ 436 (614)
T PRK08180 374 MTETAPSATFTTG-----PLSRAGNIGLPAPGCEVKLVPV--------GGKLEVRVKGPNVTPGY----WRAPELTAEAF 436 (614)
T ss_pred ccccCCceEeccc-----ccCCCCcccCccCCcEEEEecC--------CCCcEEEEecCccchhh----cCChhHhHhhc
Confidence 6898766554321 1245689999999999999983 34699999999999999 99999999998
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEE----cCCCeE-EEeecCCeEEe-CCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALR----TRAGYE-LKKRKKVWVRF-DPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~----d~dG~l-~~GR~dd~Iki-~~~ 131 (133)
. .+|||+| ||+|++ |++|+| |+||+||+||+ +|.
T Consensus 437 ~--------~dgw~~T---------GDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~ 476 (614)
T PRK08180 437 D--------EEGYYRS---------GDAVRFVDPADPERGLMFDGRIAEDFKLSSGT 476 (614)
T ss_pred c--------cCCceec---------cceEEecCCcCCCCceEEecchhhhEEcCCCc
Confidence 5 5799999 999999 578999 99999999885 453
No 78
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.80 E-value=1.4e-19 Score=138.59 Aligned_cols=115 Identities=19% Similarity=0.111 Sum_probs=90.0
Q ss_pred CCCCCcccccccCCCCCCCCC-CCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPT-KSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEI 79 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~-~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~ 79 (133)
+||++..++..... ...... +..++|+|+++++++|+++ ++++++.|+.|||+|++++++.|| +++++.+.+.
T Consensus 269 ~tE~g~~~~~~~~~-~~~~~~~~~~~~G~~~~~~~~~i~~~-~~~~~~~g~~Gel~v~~~~~~~gy----~~~~~~~~~~ 342 (408)
T TIGR01733 269 PTETTVWSTATLVD-ADDAPRESPVPIGRPLANTRLYVLDD-DLRPVPVGVVGELYIGGPGVARGY----LNRPELTAER 342 (408)
T ss_pred CCceEEEEEEEEcC-ccccCCccccccCcccCCceEEEECC-CCCCCCCCCceEEEecCccccccc----cCChhhhhcc
Confidence 58887666533221 111111 3778999999999999995 599999999999999999999999 9999999888
Q ss_pred HhhhhcccCCCCc--ccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 80 IKLNRLTMGSSLG--WASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 80 f~~~~~~~~~~~g--w~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
|...... ..++ ||+| ||++++|++|++ ++||.||+|+++|.+
T Consensus 343 ~~~~~~~--~~~~~~~~~T---------GDl~~~d~~g~~~~~gR~~~~i~~~G~~ 387 (408)
T TIGR01733 343 FVPDPFA--GGDGARLYRT---------GDLVRYLPDGNLEFLGRIDDQVKIRGYR 387 (408)
T ss_pred eeeCCCC--CCCCceEEEC---------CceEEEcCCCCEEEeeccCCEEEeCeEE
Confidence 8522111 1123 8888 999999999999 999999999998864
No 79
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.80 E-value=1.3e-19 Score=146.87 Aligned_cols=97 Identities=16% Similarity=0.092 Sum_probs=79.5
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
|||++.+++.... ...+.+++|+|+|+++++|++ .|+.|||+|+||+++.|| |++|+.+++.|
T Consensus 386 ~TE~~~~~~~~~~-----~~~~~~svG~p~pg~~v~i~~--------~G~~GEl~vrg~~v~~GY----~~~p~~t~~~f 448 (624)
T PRK12582 386 ATETAPTTTGTHW-----DTERVGLIGLPLPGVELKLAP--------VGDKYEVRVKGPNVTPGY----HKDPELTAAAF 448 (624)
T ss_pred cccccceeecccC-----CCCCCCCCCcCCCCcEEEEcc--------CCCceEEEEECCcccccc----cCCccchhhhc
Confidence 6898765442211 124567999999999999864 467899999999999999 99999999998
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEE-c---CCCeE-EEeecCCeEEe-CCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALR-T---RAGYE-LKKRKKVWVRF-DPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~-d---~dG~l-~~GR~dd~Iki-~~~ 131 (133)
. .+|||+| ||+|++ | ++|+| |+||+||+||+ +|.
T Consensus 449 ~--------~dgw~~T---------GDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~ 488 (624)
T PRK12582 449 D--------EEGFYRL---------GDAARFVDPDDPEKGLIFDGRVAEDFKLSTGT 488 (624)
T ss_pred C--------ccCCccc---------cceEEecCCcCCCCceEEeccchhhEecCCCc
Confidence 5 5799999 999998 4 56999 99999999996 454
No 80
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.80 E-value=2.3e-19 Score=143.29 Aligned_cols=106 Identities=28% Similarity=0.429 Sum_probs=89.0
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..+..... .....++++|+|++++.++|++++++++++.|+.|||+|+|+.++.|| +++++.+...|
T Consensus 357 ~tE~~~~~~~~~~----~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~~~~gY----~~~~~~~~~~~ 428 (563)
T PRK06710 357 LTESSPVTHSNFL----WEKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVKGPQIMKGY----WNKPEETAAVL 428 (563)
T ss_pred cccCccccccCcc----cccccCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEecCccchhh----hCChHHHhhhc
Confidence 5787754332211 112345789999999999999977889999999999999999999999 99999998877
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.++||+| ||+++++++|++ ++||.||+||++|..
T Consensus 429 ---------~~g~~~T---------GD~~~~~~~g~~~~~GR~dd~i~~~G~~ 463 (563)
T PRK06710 429 ---------QDGWLHT---------GDVGYMDEDGFFYVKDRKKDMIVASGFN 463 (563)
T ss_pred ---------ccCcccc---------cceEEEcCCCcEEEeeccccEEEECCEE
Confidence 4689999 999999999999 999999999998853
No 81
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.79 E-value=6.2e-19 Score=140.77 Aligned_cols=104 Identities=31% Similarity=0.558 Sum_probs=88.8
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++.+.. .......++|+|+|+++++|+| +++++++.|+.|||+|+|+.++.|| +++++.+++.|
T Consensus 359 ~tE~~~~~~~~~~----~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy----~~~~~~~~~~~ 429 (560)
T PRK08974 359 LTECSPLVSVNPY----DLDYYSGSIGLPVPSTEIKLVD-DDGNEVPPGEPGELWVKGPQVMLGY----WQRPEATDEVI 429 (560)
T ss_pred ccccCceeeccCC----CCcccCCccccCcCCCEEEEEC-CCCCCCCCCCceEEEEecCCcchhh----cCChhhhhhhh
Confidence 5888765544321 1123457899999999999999 5789999999999999999999999 99999988887
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
.++||+| ||+++++++|++ ++||.+|+||+.|.
T Consensus 430 ---------~~g~~~T---------GDl~~~~~~g~l~i~GR~~d~i~~~G~ 463 (560)
T PRK08974 430 ---------KDGWLAT---------GDIAVMDEEGFLRIVDRKKDMILVSGF 463 (560)
T ss_pred ---------hcCCccc---------CCEEEEcCCceEEEEecccceEEeCCE
Confidence 3689999 999999999999 99999999999875
No 82
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.79 E-value=7.2e-20 Score=143.74 Aligned_cols=104 Identities=25% Similarity=0.364 Sum_probs=86.9
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCC--CeEEEEEcCccccccccccCCCchhhHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQ--PGEICIRGPQIMKVAELEFWSDGGHDEE 78 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~--~Gel~i~gp~~~~GY~~~~~~~~~~t~~ 78 (133)
+||+++..+... ......+.+|.|++.++++++|.+++--.+.+. .|||+|+|+.+.+|| ++||+.|++
T Consensus 436 LTEtca~~tv~e-----~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY----~kn~ekT~e 506 (678)
T KOG1180|consen 436 LTETCAAATVLE-----PEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGY----YKNEEKTKE 506 (678)
T ss_pred ccchhcccEecC-----hhhcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhh----hCChhhhhh
Confidence 588876655543 234556799999999999999976665544444 799999999999999 999999999
Q ss_pred HHhhhhcccCCCCc--ccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeC
Q 032813 79 IIKLNRLTMGSSLG--WASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFD 129 (133)
Q Consensus 79 ~f~~~~~~~~~~~g--w~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~ 129 (133)
.|.. ++| ||+| ||+|.+.+||.| |++|+||+||+-
T Consensus 507 ~ft~-------~~G~~WF~T---------GDIGe~~pdG~LkIIDRKKdLVKlq 544 (678)
T KOG1180|consen 507 DFTV-------EDGQRWFRT---------GDIGEFHPDGCLKIIDRKKDLVKLQ 544 (678)
T ss_pred hcee-------cCCcEEEec---------cccceecCCCcEEEeechhhhhhhc
Confidence 9972 267 9999 999999999999 999999999964
No 83
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.79 E-value=6.2e-19 Score=139.08 Aligned_cols=103 Identities=20% Similarity=0.370 Sum_probs=88.6
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++... ....+.+++|+|+++++++|+| ++++++++|+.|||+|+|++++.|| +++++.+++.|
T Consensus 312 ~tE~~~~~~~~~-----~~~~~~~~~G~~~~g~~v~i~d-~~~~~~~~g~~Gel~i~~~~~~~gY----~~~~~~~~~~~ 381 (508)
T TIGR02262 312 STEMLHIFLSNL-----PGDVRYGTSGKPVPGYRLRLVG-DGGQDVAAGEPGELLISGPSSATMY----WNNRAKTRDTF 381 (508)
T ss_pred ccccCceeecCC-----ccCCCCCCcCCCCCCcEEEEEC-CCCCCCCCCCeeEEEEecCcccccc----CCCHHHhHhhh
Confidence 478775444321 1123467899999999999999 7899999999999999999999999 99999999888
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
.++||+| ||+++++++|.+ ++||.||+||+.|.
T Consensus 382 ---------~~~~~~T---------GD~~~~~~~g~~~~~gR~~d~i~~~G~ 415 (508)
T TIGR02262 382 ---------QGEWTRS---------GDKYVRNDDGSYTYAGRTDDMLKVSGI 415 (508)
T ss_pred ---------hcCceec---------cceEEEcCCccEEEeccccceeeeCCE
Confidence 3689999 999999999999 99999999999875
No 84
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.79 E-value=4.5e-19 Score=141.21 Aligned_cols=101 Identities=28% Similarity=0.406 Sum_probs=85.2
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCC------------CeEEEE-EcCcccccccc
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQ------------PGEICI-RGPQIMKVAEL 67 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~------------~Gel~i-~gp~~~~GY~~ 67 (133)
+||++..++... ....+++|.|+++ ++|++++++++++.|+ .|||++ +|++++.||
T Consensus 299 ~TE~~~~~~~~~-------~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy-- 367 (529)
T PRK07867 299 STEGGVAITRTP-------DTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGY-- 367 (529)
T ss_pred ccccccccccCC-------CCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccc--
Confidence 688875443211 1345689999998 7788866788999988 999999 999999999
Q ss_pred ccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 68 EFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 68 ~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
|++++.+.+.| .+|||+| ||+++++++|++ |+||+||+||++|..
T Consensus 368 --~~~~~~~~~~~---------~~g~~~T---------GD~~~~~~~g~l~~~GR~~d~i~~~G~~ 413 (529)
T PRK07867 368 --YNDPEADAERM---------RGGVYWS---------GDLAYRDADGYAYFAGRLGDWMRVDGEN 413 (529)
T ss_pred --cCChHhhhhhh---------cCCeEee---------ccEEEEeCCCcEEEeccccCeEEECCEE
Confidence 99999998888 4689999 999999999999 999999999998853
No 85
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.78 E-value=6.1e-19 Score=139.60 Aligned_cols=109 Identities=27% Similarity=0.426 Sum_probs=89.6
Q ss_pred CCCCCcccccccCCCC-CCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHH
Q 032813 1 MTEAGPVLSMCLGFAK-QPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEI 79 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~-~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~ 79 (133)
+||++..++....... ........++|+|+|++.++|+| +++++++.|+.|||+|+|+.++.|| +++++.+...
T Consensus 315 ~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy----~~~~~~~~~~ 389 (524)
T PRK06188 315 QTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLD-EDGREVAQGEVGEICVRGPLVMDGY----WNRPEETAEA 389 (524)
T ss_pred ccccCCceeecCchhccccccccCCccccccCCcEEEEEc-CCCCCCCCCCeeEEEEECcchhhhh----cCChHHhhhh
Confidence 5888655444321100 01223567899999999999999 5699999999999999999999999 9999998888
Q ss_pred HhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 80 IKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 80 f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
| .+|||+| ||+++++++|++ ++||.+++||++|..
T Consensus 390 ~---------~~g~~~T---------GDl~~~~~~g~~~~~GR~~~~i~~~G~~ 425 (524)
T PRK06188 390 F---------RDGWLHT---------GDVAREDEDGFYYIVDRKKDMIVTGGFN 425 (524)
T ss_pred h---------cCCceee---------cceEEEcCCccEEEEeccccceecCCEE
Confidence 8 4689999 999999999999 999999999998853
No 86
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.78 E-value=6.6e-19 Score=140.47 Aligned_cols=102 Identities=23% Similarity=0.264 Sum_probs=81.6
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEE-----------EEcCCCCccC-CCCCCeEEEEE-cCcccccccc
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELK-----------VIDPEIGASL-PHNQPGEICIR-GPQIMKVAEL 67 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~-----------i~d~~~g~~~-~~g~~Gel~i~-gp~~~~GY~~ 67 (133)
+||++.+++... ....+++|+|++++++. ++| ++|+++ +.+..|||+++ |++++.||
T Consensus 297 ~tE~~~~~~~~~-------~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~~~~~~GEl~v~~g~~~~~gY-- 366 (540)
T PRK13388 297 SSEGAVIVVREP-------GTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGALLNADEAIGELVNTAGAGFFEGY-- 366 (540)
T ss_pred cccccceeecCC-------CCCCCCCCCCCCCcEEEcCCCCccccceecc-CccccccCCCcceEEEEecCCcccccc--
Confidence 588875443221 23457899999997653 444 455555 34678999998 99999999
Q ss_pred ccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 68 EFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 68 ~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
|++|+.+++.| .+|||+| ||+|++|++|++ ++||+||+||++|..
T Consensus 367 --~~~~~~t~~~~---------~~g~~~T---------GD~~~~~~dg~l~i~GR~~d~i~~~G~~ 412 (540)
T PRK13388 367 --YNNPEATAERM---------RHGMYWS---------GDLAYRDADGWIYFAGRTADWMRVDGEN 412 (540)
T ss_pred --cCChHHHHHHh---------hcCceec---------cceEEEcCCCcEEEeccCCceEEECCEE
Confidence 99999999988 3689999 999999999999 999999999998863
No 87
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.78 E-value=1.7e-19 Score=137.50 Aligned_cols=89 Identities=21% Similarity=0.316 Sum_probs=82.0
Q ss_pred CCCCCccccCC-CCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCccccccc
Q 032813 20 PTKSGSCGTVV-RNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQ 98 (133)
Q Consensus 20 ~~~~~~vG~p~-p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~ 98 (133)
+....+-|+|+ |.-+++|+| ++|+++++|++|+|..|||..++|| |+.|+.++.+|. .+|+|+|
T Consensus 354 E~i~~TQGrPlsP~DEvrvvD-~dg~pv~pGE~G~LltRGPYTirGY----yrap~HNa~aF~--------a~GFYrs-- 418 (542)
T COG1021 354 EIIIHTQGRPLSPDDEVRVVD-ADGNPVAPGEVGELLTRGPYTIRGY----YRAPEHNARAFD--------ADGFYRS-- 418 (542)
T ss_pred HheeecCCCcCCCcceeEEec-CCCCCCCCCCcceeeecCCeeeeee----ccCchhhhhccC--------cCCceec--
Confidence 44456889998 678999999 7899999999999999999999999 999999999997 6899999
Q ss_pred CCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCC
Q 032813 99 AEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDP 130 (133)
Q Consensus 99 ~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~ 130 (133)
||+.++|+|||| +.||.||||+.-|
T Consensus 419 -------GD~V~~~~dGyl~V~GR~KDQINRgG 444 (542)
T COG1021 419 -------GDLVRRDPDGYLVVEGRVKDQINRGG 444 (542)
T ss_pred -------CceeEecCCceEEEEeeehhhhcccc
Confidence 999999999999 9999999999765
No 88
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.78 E-value=8.2e-19 Score=138.12 Aligned_cols=104 Identities=22% Similarity=0.317 Sum_probs=88.6
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++... .......+++|+|+ +..++|+| +++++++.|+.|||+++|+.++.|| |++++.+++.|
T Consensus 296 ~tE~~~~~~~~~----~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy----~~~~~~~~~~~ 365 (502)
T PRK08276 296 SSEGGGVTVITS----EDWLAHPGSVGKAV-LGEVRILD-EDGNELPPGEIGTVYFEMDGYPFEY----HNDPEKTAAAR 365 (502)
T ss_pred cccccceeEecC----ccccccCCCcceec-ccEEEEEC-CCCCCCcCCCceEEEEECCCccchh----cCCHHHHHHHh
Confidence 588876544432 11234557899999 88999999 5789999999999999999999999 99999999988
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
. .++||+| ||+++++++|++ ++||.||+||++|.
T Consensus 366 ~--------~~~~~~T---------GD~~~~~~~g~~~~~GR~~~~i~~~G~ 400 (502)
T PRK08276 366 N--------PHGWVTV---------GDVGYLDEDGYLYLTDRKSDMIISGGV 400 (502)
T ss_pred c--------CCCceee---------cceEEEcCCcCEEEeccCcceEEeCCE
Confidence 6 4599999 999999999999 99999999999885
No 89
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.78 E-value=1.1e-18 Score=138.74 Aligned_cols=106 Identities=26% Similarity=0.301 Sum_probs=87.8
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEc-CCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVID-PEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEI 79 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d-~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~ 79 (133)
+||++..++.... .....+.++|+|++++.++|++ .+++++++.|+.|||+|+|++++.|| |++|+.+++.
T Consensus 346 ~TE~~~~~~~~~~----~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~gy----~~~~~~~~~~ 417 (541)
T TIGR03205 346 MTETCSPGTGHPP----EGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRGY----WNRPEESAEA 417 (541)
T ss_pred cccCCcccccCCC----CCCCCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEecCCccccc----cCChhhhHhh
Confidence 5888765544321 1123457899999999988764 25688999999999999999999999 9999999988
Q ss_pred HhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 80 IKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 80 f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
|. ++||+| ||+++++++|++ ++||.||+||++|..
T Consensus 418 ~~---------~~~~~T---------GD~~~~~~~g~l~i~GR~~~~i~~~G~~ 453 (541)
T TIGR03205 418 FV---------GDRFLT---------GDIGYMDTDGYFFLVDRKKDMIISGGFN 453 (541)
T ss_pred hc---------cCCccc---------CceEEEcCCceEEEEccccCeEEECCEE
Confidence 83 589999 999999999999 999999999998753
No 90
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.78 E-value=7.7e-19 Score=138.27 Aligned_cols=114 Identities=19% Similarity=0.195 Sum_probs=88.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
|||++..+... ......+.+++|+|+++++++|++ +++++++.|+.|||+++|+.++.|| |++++.+++.|
T Consensus 309 ~tE~~~~~~~~----~~~~~~~~~~vG~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~gy----~~~~~~~~~~~ 379 (515)
T TIGR03098 309 LTEAFRSTYLP----PEEVDRRPDSIGKAIPNAEVLVLR-EDGSECAPGEEGELVHRGALVAMGY----WNDPEKTAERF 379 (515)
T ss_pred cccccceEecc----cccccCCCCCcceecCCCEEEEEC-CCCCCCCCCCceEEEEcCchhhccc----cCCchhhhhhh
Confidence 57876433221 111234568999999999999999 6799999999999999999999999 99999998888
Q ss_pred hhhhc---ccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRL---TMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~---~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
..... .....++||+| ||+|++|++|++ +.||.||+||++|..
T Consensus 380 ~~~~~~~~~~~~~~~~~~T---------GD~~~~~~~g~l~~~GR~~d~i~~~G~~ 426 (515)
T TIGR03098 380 RPLPPRPGELHLPELAVWS---------GDTVRRDEEGFLYFVGRRDEMIKTSGYR 426 (515)
T ss_pred hccCCccccccccccceec---------cceEEEcCCceEEEEeccccceecCCEE
Confidence 63211 00011235555 999999999999 999999999998864
No 91
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.78 E-value=8.2e-19 Score=138.44 Aligned_cols=104 Identities=27% Similarity=0.295 Sum_probs=86.9
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCcccc-ccccccCCCchhhHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMK-VAELEFWSDGGHDEEI 79 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~-GY~~~~~~~~~~t~~~ 79 (133)
+||++.+++... .+....++++|+|+++++++|+| +++++++.|+.|||+++++.++. +| +++++.++..
T Consensus 305 ~tE~~~~~~~~~----~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~~~y----~~~~~~~~~~ 375 (509)
T PRK12406 305 STESGAVTFATS----EDALSHPGTVGKAAPGAELRFVD-EDGRPLPQGEIGEIYSRIAGNPDFTY----HNKPEKRAEI 375 (509)
T ss_pred ccccCceEecCc----ccccccCCCcCccCCCcEEEEEC-CCCCCCCCCCceEEEEECCccccccc----cCCchhcccc
Confidence 689886544321 12234567899999999999999 57899999999999999998875 88 8998887765
Q ss_pred HhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 80 IKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 80 f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
+ .++||+| ||++++|++|++ ++||.||+||++|.
T Consensus 376 ~---------~~~~~~T---------GD~~~~~~~g~~~~~GR~~d~ik~~G~ 410 (509)
T PRK12406 376 D---------RGGFITS---------GDVGYLDADGYLFLCDRKRDMVISGGV 410 (509)
T ss_pred c---------CCCCeEE---------ccEEEEcCCceEEEeecccceEEECCE
Confidence 5 4689999 999999999999 99999999999885
No 92
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.78 E-value=5.5e-19 Score=141.87 Aligned_cols=85 Identities=27% Similarity=0.551 Sum_probs=76.7
Q ss_pred CccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCC
Q 032813 24 GSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGR 103 (133)
Q Consensus 24 ~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~ 103 (133)
.++|+|+|+++++|+| +++++++.++.|||+|+|+.++.|| |++ +.+.+.|. .++||+|
T Consensus 385 ~~vG~~~p~~~v~i~d-~~~~~~~~g~~Gel~i~g~~~~~gY----~~~-~~~~~~~~--------~dgw~~T------- 443 (579)
T PRK09192 385 VNCGKALPGHEIEIRN-EAGMPLPERVVGHICVRGPSLMSGY----FRD-EESQDVLA--------ADGWLDT------- 443 (579)
T ss_pred eecCCcCCCcEEEEEC-CCCCCCCCCCEEEEEecCCchhhhh----cCC-cccccccc--------CCceeec-------
Confidence 5799999999999999 5789999999999999999999999 888 56666664 5789999
Q ss_pred CCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 104 WAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 104 ~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||+|++ ++|++ |+||+||+||++|..
T Consensus 444 --GDlg~~-~~G~l~~~GR~dd~i~~~G~~ 470 (579)
T PRK09192 444 --GDLGYL-LDGYLYITGRAKDLIIINGRN 470 (579)
T ss_pred --cceeeE-ECCEEEEEeccccEEEECCCc
Confidence 999999 99999 999999999999864
No 93
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.78 E-value=6.2e-19 Score=143.76 Aligned_cols=91 Identities=14% Similarity=0.102 Sum_probs=75.8
Q ss_pred CCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcC--ccccccccccCCCchhhH--HHHhhhhcccCCCCccccc
Q 032813 21 TKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGP--QIMKVAELEFWSDGGHDE--EIIKLNRLTMGSSLGWASK 96 (133)
Q Consensus 21 ~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp--~~~~GY~~~~~~~~~~t~--~~f~~~~~~~~~~~gw~~t 96 (133)
...+++|.|.++++++|+| ++|+++ +|+.|||+|+|| +++.|| |++++.++ +.+.. ..+|||+|
T Consensus 436 ~~~g~~g~p~~g~~v~ivd-~~g~~~-~g~~GEl~v~gp~p~~~~gy----~~~~~~t~~~~~~~~------~~~g~~~t 503 (652)
T TIGR01217 436 VHIGEIQAPGLGTAVQSWD-PEGKPV-TGEVGELVCTNPMPSMPIRF----WNDPDGSKYRDAYFD------TYPGVWRH 503 (652)
T ss_pred CcCCccCCCcCCCceEEEC-CCCCCC-CCCccEEEEecCCCccccce----eCCCccchhHHhhhc------CCCCEEEc
Confidence 3467899999999999999 678888 599999999996 689999 99998654 22221 02477888
Q ss_pred ccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 97 AQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 97 ~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||+|++|+||+| |+||+||+||+.|..
T Consensus 504 ---------GDlg~~d~dG~l~i~GR~dd~I~~~G~r 531 (652)
T TIGR01217 504 ---------GDWITLTPRGGIVIHGRSDSTLNPQGVR 531 (652)
T ss_pred ---------CCcEEECCCCcEEEEecccCeEecCCEE
Confidence 999999999999 999999999999864
No 94
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.78 E-value=5.4e-19 Score=145.32 Aligned_cols=108 Identities=22% Similarity=0.374 Sum_probs=78.0
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCC--CchhhHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWS--DGGHDEE 78 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~--~~~~t~~ 78 (133)
|||++..++.... ...+.+++|+|+|+++++|+|+ ++. ++.|||+++|++++.|| |+ +++.+..
T Consensus 513 ~TE~~~~~~~~~~-----~~~~~~svG~p~pg~~~~i~d~-~~~----~~~Gel~v~g~~v~~GY----~~~e~~~~~~~ 578 (718)
T PRK08043 513 VTECAPVVSINVP-----MAAKPGTVGRILPGMDARLLSV-PGI----EQGGRLQLKGPNIMNGY----LRVEKPGVLEV 578 (718)
T ss_pred cccccceEEecCC-----cccCCCCCCCcCCCCeeEEecC-CCC----CCceEEEEecCCccccc----cCCCCcccccc
Confidence 6898765544321 1245689999999999999984 342 46699999999999999 77 4443211
Q ss_pred HHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 79 IIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 79 ~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.+....... ..+|||+| ||+|++|+||+| |+||+||+||+.|.+
T Consensus 579 ~~~~~~~~~-~~~gw~~T---------GDlg~~d~dG~l~i~GR~~d~I~~~G~~ 623 (718)
T PRK08043 579 PTAENARGE-MERGWYDT---------GDIVRFDEQGFVQIQGRAKRFAKIAGEM 623 (718)
T ss_pred ccccccccc-ccCCeEec---------CCEEEEcCCCcEEEEecCCCeeEeCcEE
Confidence 110000000 03689999 999999999999 999999999999853
No 95
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.78 E-value=8.4e-19 Score=142.71 Aligned_cols=91 Identities=15% Similarity=0.073 Sum_probs=75.6
Q ss_pred CCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcC--ccccccccccCCCchhhH--HHHhhhhcccCCCCccccc
Q 032813 21 TKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGP--QIMKVAELEFWSDGGHDE--EIIKLNRLTMGSSLGWASK 96 (133)
Q Consensus 21 ~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp--~~~~GY~~~~~~~~~~t~--~~f~~~~~~~~~~~gw~~t 96 (133)
.+.+++|.|+++++++|+| ++|+++ .|+.|||+|++| +++.|| |++++.++ +.+.. ..++||+|
T Consensus 435 ~~~g~~g~p~~g~~~~ivd-~~g~~~-~g~~GeL~v~gp~p~~~~gy----~~~~~~~~~~~~~~~------~~~g~~~T 502 (655)
T PRK03584 435 VYRGEIQCRGLGMAVEAWD-EDGRPV-VGEVGELVCTKPFPSMPLGF----WNDPDGSRYRDAYFD------TFPGVWRH 502 (655)
T ss_pred cCCCccCCCcCCceeEEEC-CCCCCC-CCCceEEEEccCCCCCccee----eCCCccchHHHhhhc------cCCCEeec
Confidence 4568899999999999999 678888 799999999996 799999 99987543 22210 02467788
Q ss_pred ccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 97 AQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 97 ~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||+|++|+||+| |+||+||+||++|..
T Consensus 503 ---------GDl~~~d~dG~l~i~GR~dd~Ik~~G~r 530 (655)
T PRK03584 503 ---------GDWIEITEHGGVVIYGRSDATLNRGGVR 530 (655)
T ss_pred ---------CCeEEECCCCeEEEEeeccCeeecCcEE
Confidence 999999999999 999999999999853
No 96
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.77 E-value=1.3e-18 Score=137.69 Aligned_cols=102 Identities=17% Similarity=0.141 Sum_probs=82.9
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..+.... ........++|+|+|+++++|+| ++++++++|+.|||+++|+.++.|| ++++. ..+
T Consensus 326 ~tE~~~~~~~~~----~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~Y----~~~~~---~~~ 393 (516)
T PRK13383 326 STEVGIGALATP----ADLRDAPETVGKPVAGCPVRILD-RNNRPVGPRVTGRIFVGGELAGTRY----TDGGG---KAV 393 (516)
T ss_pred ccccccceeccc----cccccCCCcccCCCCCcEEEEEC-CCCCCCCCCCceEEEEecCcccccc----cCCch---hhe
Confidence 689875443321 11123467899999999999999 5789999999999999999999999 76653 222
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.+|||+| ||+|++|++|++ ++||+||+||++|.+
T Consensus 394 ---------~~g~~~T---------GDl~~~d~~G~l~i~GR~~~~i~~~G~~ 428 (516)
T PRK13383 394 ---------VDGMTST---------GDMGYLDNAGRLFIVGREDDMIISGGEN 428 (516)
T ss_pred ---------ecCceec---------ceeEEEcCCccEEEeccccceEEECCEE
Confidence 3689999 999999999999 999999999998864
No 97
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.77 E-value=1.9e-18 Score=135.51 Aligned_cols=112 Identities=21% Similarity=0.154 Sum_probs=88.4
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++............+..++|+|+++++++|+| +++.+++.|+.|||+|+|+.++.|| |++++.+.+.|
T Consensus 295 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy----~~~~~~~~~~~ 369 (503)
T PRK04813 295 PTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIID-EEGTKLPDGEQGEIVISGPSVSKGY----LNNPEKTAEAF 369 (503)
T ss_pred cchheeEEEEEEecccccccCCCCcccccCCCCEEEEEC-CCCCCCCCCCceEEEEecccccccc----CCChhHhHHhh
Confidence 578765443322111111223456899999999999999 6899999999999999999999999 99999998887
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
... ...+||+| ||++++ ++|++ +.||.||+||++|.+
T Consensus 370 ~~~-----~g~~~~~t---------GD~~~~-~~g~~~~~GR~~d~i~~~G~~ 407 (503)
T PRK04813 370 FTF-----DGQPAYHT---------GDAGYL-EDGLLFYQGRIDFQIKLNGYR 407 (503)
T ss_pred ccC-----CCceeEEC---------CceEEe-eCCeEEEeccccceEEECcEE
Confidence 421 12359999 999999 99999 999999999998864
No 98
>PRK13391 acyl-CoA synthetase; Provisional
Probab=99.77 E-value=2.3e-18 Score=136.02 Aligned_cols=105 Identities=21% Similarity=0.285 Sum_probs=86.6
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.++.... ......++++|+|+++ .++|+| +++++++.|+.|||+++|+ ++.|| +++++.+++.|
T Consensus 309 ~tE~~~~~~~~~----~~~~~~~~~vG~~~~g-~~~i~d-~~~~~~~~g~~Gel~~~g~-~~~gy----~~~~~~~~~~~ 377 (511)
T PRK13391 309 ATEGLGFTACDS----EEWLAHPGTVGRAMFG-DLHILD-DDGAELPPGEPGTIWFEGG-RPFEY----LNDPAKTAEAR 377 (511)
T ss_pred cccccceEEecC----ccccccCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecC-cceEE----cCChhHhHHhh
Confidence 578876543321 1123456799999999 699999 6799999999999999999 88999 99999998887
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.. +++||+| ||+|+++++|++ ++||.||+||++|..
T Consensus 378 ~~-------~~~w~~T---------GD~g~~~~~g~l~~~gR~~~~i~~~G~~ 414 (511)
T PRK13391 378 HP-------DGTWSTV---------GDIGYVDEDGYLYLTDRAAFMIISGGVN 414 (511)
T ss_pred cc-------CCCEEec---------CCEEEECCCccEEEeccCCCEEEeCCEE
Confidence 51 2489999 999999999999 999999999998853
No 99
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.76 E-value=2.1e-18 Score=138.14 Aligned_cols=93 Identities=19% Similarity=0.278 Sum_probs=76.5
Q ss_pred ccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcc---cCCCCcccccccCCC
Q 032813 25 SCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLT---MGSSLGWASKAQAEP 101 (133)
Q Consensus 25 ~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~---~~~~~gw~~t~~~~~ 101 (133)
++|+|. +.+++|+|++++++++.|+.|||+|+|++++.|| |++|+.+++.|..+... ....++||+|
T Consensus 372 ~~g~p~-~~~~~ivd~~~~~~~~~g~~Gel~v~g~~~~~gY----~~~~~~t~~~f~~~~~~~~~~~~~~~w~~T----- 441 (578)
T PRK05850 372 SYGSPR-SPTVRIVDPDTCIECPAGTVGEIWVHGDNVAAGY----WQKPEETERTFGATLVDPSPGTPEGPWLRT----- 441 (578)
T ss_pred eccCCC-CCEEEEEcCCCCcCCCCCCEEEEEEecCcccccc----cCChhhhHHHhhcccccccccCCCCCeeec-----
Confidence 456654 5789999977789999999999999999999999 99999999999521110 0012479999
Q ss_pred CCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 102 GRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 102 ~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||+|+++ +|+| |+||+||+||++|.+
T Consensus 442 ----GDl~~~~-~G~l~~~GR~~d~i~~~G~~ 468 (578)
T PRK05850 442 ----GDLGFIS-EGELFIVGRIKDLLIVDGRN 468 (578)
T ss_pred ----cceeeEE-CCEEEEEcccccEEEECCee
Confidence 9999998 8999 999999999999864
No 100
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.75 E-value=6.5e-18 Score=132.77 Aligned_cols=109 Identities=30% Similarity=0.425 Sum_probs=88.6
Q ss_pred CCCCCcccccccCCCCCC-CCCCCCccccCCCCcEEEEEcCCCCccCCC--CCCeEEEEEcCccccccccccCCCchhhH
Q 032813 1 MTEAGPVLSMCLGFAKQP-FPTKSGSCGTVVRNAELKVIDPEIGASLPH--NQPGEICIRGPQIMKVAELEFWSDGGHDE 77 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~-~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~--g~~Gel~i~gp~~~~GY~~~~~~~~~~t~ 77 (133)
+||++.+++......... ......++|+|++++.++|+| +++++++. |+.|||++++++++.|| +++++.+.
T Consensus 315 ~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~v~~~~~~~~y----~~~~~~~~ 389 (521)
T PRK06187 315 MTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVD-DDGDELPPDGGEVGEIIVRGPWLMQGY----WNRPEATA 389 (521)
T ss_pred cCccCcccccCCcccccccccccCCccccccCCeEEEEEC-CCCCCCCCCCCCeeEEEEECcchhhhh----cCCHHHHH
Confidence 578876554432110000 012567999999999999999 56889998 99999999999999999 99999998
Q ss_pred HHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 78 EIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 78 ~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
+.|. ++||+| ||+++++++|++ ++||.+|+||++|..
T Consensus 390 ~~~~---------~~~~~t---------GD~~~~~~~g~~~~~GR~~~~i~~~G~~ 427 (521)
T PRK06187 390 ETID---------GGWLHT---------GDVGYIDEDGYLYITDRIKDVIISGGEN 427 (521)
T ss_pred HHhh---------CCceec---------cceEEEcCCCCEEEeecccceEEcCCeE
Confidence 8883 579999 999999999999 999999999999863
No 101
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.73 E-value=9.3e-18 Score=131.70 Aligned_cols=93 Identities=22% Similarity=0.214 Sum_probs=73.1
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++... +.+......++|+|+|+++++|+ .|+.|||+|+||+++.|| |+++..
T Consensus 263 ~TE~~~~~~~~~---~~~~~~~~~~~G~~~p~~~v~i~---------~g~~Gel~v~g~~~~~gY----~~~~~~----- 321 (452)
T PRK07445 263 MTETASQIATLK---PDDFLAGNNSSGQVLPHAQITIP---------ANQTGNITIQAQSLALGY----YPQILD----- 321 (452)
T ss_pred hhhhcccccccC---chhhccCCCcCCccCCCCeEEEc---------CCCcceEEEeCCccchhh----cCCccC-----
Confidence 589875444322 11112345689999999999997 356899999999999999 765321
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.++||+| ||++++|+||+| |+||+||+||++|.+
T Consensus 322 ---------~~g~~~T---------GDl~~~d~dG~l~~~GR~dd~I~~~G~~ 356 (452)
T PRK07445 322 ---------SQGIFET---------DDLGYLDAQGYLHILGRNSQKIITGGEN 356 (452)
T ss_pred ---------CCCEEEC---------CCEEEEcCCCCEEEEeecCCEEEECCEE
Confidence 3589999 999999999999 999999999998853
No 102
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.73 E-value=1.6e-17 Score=132.30 Aligned_cols=83 Identities=20% Similarity=0.396 Sum_probs=72.3
Q ss_pred CCccccCCCCcEEEEEcCCCCccCCCC--CCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCC
Q 032813 23 SGSCGTVVRNAELKVIDPEIGASLPHN--QPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAE 100 (133)
Q Consensus 23 ~~~vG~p~p~~~v~i~d~~~g~~~~~g--~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~ 100 (133)
..++|+|+|+++++|+| +++++++.+ +.|||+++|+.++.|| |++++ ..+ .+|||+|
T Consensus 355 ~~~~G~p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy----~~~~~---~~~---------~~g~~~T---- 413 (539)
T PRK07008 355 LEKQGRVIYGVDMKIVG-DDGRELPWDGKAFGDLQVRGPWVIDRY----FRGDA---SPL---------VDGWFPT---- 413 (539)
T ss_pred cccCCccccceEEEEEC-CCCCccCCCCCcceEEEEeCCccchhh----cCChh---hhh---------cCCCccc----
Confidence 46899999999999999 578888754 5799999999999999 88873 334 2589999
Q ss_pred CCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 101 PGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 101 ~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
||++++|+||++ ++||+||+||++|.
T Consensus 414 -----GD~~~~~~dg~l~~~GR~~d~i~~~G~ 440 (539)
T PRK07008 414 -----GDVATIDADGFMQITDRSKDVIKSGGE 440 (539)
T ss_pred -----CceEEEcCCCcEEEeecccCEEEeCCe
Confidence 999999999999 99999999999885
No 103
>PLN02479 acetate-CoA ligase
Probab=99.73 E-value=9.7e-18 Score=134.38 Aligned_cols=87 Identities=28% Similarity=0.375 Sum_probs=77.0
Q ss_pred CccccCCCCcE-EEEEcCCCCccCCCC--CCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCC
Q 032813 24 GSCGTVVRNAE-LKVIDPEIGASLPHN--QPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAE 100 (133)
Q Consensus 24 ~~vG~p~p~~~-v~i~d~~~g~~~~~g--~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~ 100 (133)
.++|.+.++.+ ++|+|++++++++.+ +.|||+++|++++.|| |++|+.+++.| .++||+|
T Consensus 372 ~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~~GY----~~~~~~t~~~~---------~~g~~~T---- 434 (567)
T PLN02479 372 ARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRGNMVMKGY----LKNPKANEEAF---------ANGWFHS---- 434 (567)
T ss_pred cccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEeccchhhhh----hcCcccccchh---------cCCceec----
Confidence 46788888875 889986678888764 6799999999999999 99999999998 3689999
Q ss_pred CCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 101 PGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 101 ~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||++++|++|++ |+||.||+||+.|..
T Consensus 435 -----GDl~~~~~~g~l~~~GR~~d~i~~~G~~ 462 (567)
T PLN02479 435 -----GDLGVKHPDGYIEIKDRSKDIIISGGEN 462 (567)
T ss_pred -----ceeEEEcCCccEEEeccccceEEeCCEE
Confidence 999999999999 999999999998853
No 104
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.73 E-value=1.4e-17 Score=132.46 Aligned_cols=87 Identities=24% Similarity=0.269 Sum_probs=74.9
Q ss_pred CCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCC
Q 032813 22 KSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEP 101 (133)
Q Consensus 22 ~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~ 101 (133)
...++|+|+++++++|+| +++++++.|+.|||+++|+.++.|| ++.+......+ .++||+|
T Consensus 358 ~~~~~G~~~~g~~~~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy----~~~~~~~~~~~---------~~g~~~T----- 418 (545)
T PRK07768 358 RLATLGPPLPGLEVRVVD-EDGQVLPPRGVGVIELRGESVTPGY----LTMDGFIPAQD---------ADGWLDT----- 418 (545)
T ss_pred eEEeccCCCCCCEEEEEC-CCCCCCCCCCEEEEEEccCcccccc----cCCCCCccccc---------CCCeeec-----
Confidence 346899999999999999 6789999999999999999999999 76544332222 4689999
Q ss_pred CCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 102 GRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 102 ~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
||+++++++|++ ++||.||+||+.|.
T Consensus 419 ----GDl~~~~~~g~l~~~GR~~d~i~~~G~ 445 (545)
T PRK07768 419 ----GDLGYLTEEGEVVVCGRVKDVIIMAGR 445 (545)
T ss_pred ----cceEEEecCCEEEEEccccceEEECCE
Confidence 999999999999 99999999999875
No 105
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.72 E-value=2.3e-17 Score=132.75 Aligned_cols=85 Identities=25% Similarity=0.299 Sum_probs=70.1
Q ss_pred CccccCCCCcEEEEEcCCCCccCCC--CCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCC
Q 032813 24 GSCGTVVRNAELKVIDPEIGASLPH--NQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEP 101 (133)
Q Consensus 24 ~~vG~p~p~~~v~i~d~~~g~~~~~--g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~ 101 (133)
+..+.+++ .+.+++++.+++++. ++.|||+|+||+++.|| |++|+.+++.| .+|||+|
T Consensus 365 g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY----~~~~~~t~~~f---------~~gw~~T----- 424 (579)
T PLN03102 365 GVSILGLA--DVDVKNKETQESVPRDGKTMGEIVIKGSSIMKGY----LKNPKATSEAF---------KHGWLNT----- 424 (579)
T ss_pred Cccccccc--ceEEeccccccccCCCCCCceEEEEECcchhhhh----cCChhhhHhhh---------ccCceec-----
Confidence 33444444 455666556777764 36899999999999999 99999999998 3689999
Q ss_pred CCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 102 GRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 102 ~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||+|++|+||+| |+||+||+||++|..
T Consensus 425 ----GDlg~~d~dG~l~i~GR~~d~i~~~G~~ 452 (579)
T PLN03102 425 ----GDVGVIHPDGHVEIKDRSKDIIISGGEN 452 (579)
T ss_pred ----CceEEEcCCCeEEEEeccCcEEEECCEE
Confidence 999999999999 999999999998753
No 106
>PRK08162 acyl-CoA synthetase; Validated
Probab=99.71 E-value=4.7e-17 Score=129.41 Aligned_cols=87 Identities=28% Similarity=0.341 Sum_probs=74.8
Q ss_pred CCccccCCCC-cEEEEEcCCCCccCCC-C-CCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccC
Q 032813 23 SGSCGTVVRN-AELKVIDPEIGASLPH-N-QPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQA 99 (133)
Q Consensus 23 ~~~vG~p~p~-~~v~i~d~~~g~~~~~-g-~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~ 99 (133)
..++|.+++. ..++|+|++++++++. | +.|||+|+|++++.|| +++++.+.+.|. ++||+|
T Consensus 357 ~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY----~~~~~~~~~~~~---------~g~~~T--- 420 (545)
T PRK08162 357 KARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGY----LKNPKATEEAFA---------GGWFHT--- 420 (545)
T ss_pred cCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhh----cCChhhhHHHhh---------CCCccc---
Confidence 3567776653 4688999767888876 3 4699999999999999 999999999883 689999
Q ss_pred CCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 100 EPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 100 ~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
||++++|++|++ |+||.||+||++|.
T Consensus 421 ------GDl~~~d~dg~l~~~GR~~~~i~~~G~ 447 (545)
T PRK08162 421 ------GDLAVLHPDGYIKIKDRSKDIIISGGE 447 (545)
T ss_pred ------CceEEEcCCccEEEEecccceEEeCCE
Confidence 999999999999 99999999999985
No 107
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.71 E-value=2.8e-17 Score=140.53 Aligned_cols=101 Identities=21% Similarity=0.399 Sum_probs=78.1
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++.... ...+..++|+|+|++++++.+. .+ .++.|||+|+|++++.|| |++++... +
T Consensus 941 ~TE~~~~~~~~~~-----~~~~~~~vG~p~~g~~~~~~~~-~~----~~~~Gel~v~g~~~~~gY----~~~~~~~~--~ 1004 (1140)
T PRK06814 941 VTETAPVIALNTP-----MHNKAGTVGRLLPGIEYRLEPV-PG----IDEGGRLFVRGPNVMLGY----LRAENPGV--L 1004 (1140)
T ss_pred cccccceEEecCC-----CCCCCCcCCccCCCCeEEEeec-CC----CCCceEEEEeCCCcchhh----cCCCCCCc--c
Confidence 5898866554321 1245679999999999999873 22 367899999999999999 87664321 1
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. . ..+|||+| ||++++|+||++ ++||.||+||++|.+
T Consensus 1005 ~--~----~~~g~~~T---------GDl~~~d~dG~l~~~GR~~d~i~~~G~~ 1042 (1140)
T PRK06814 1005 E--P----PADGWYDT---------GDIVTIDEEGFITIKGRAKRFAKIAGEM 1042 (1140)
T ss_pred c--c----CCCCeEec---------CCEEEECCCCeEEEEecccCeeeeCCEE
Confidence 1 0 04689999 999999999999 999999999999853
No 108
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.69 E-value=6.5e-17 Score=130.16 Aligned_cols=108 Identities=21% Similarity=0.284 Sum_probs=88.8
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCC-CCeEEEEEcC---ccccccccccCCCchhh
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHN-QPGEICIRGP---QIMKVAELEFWSDGGHD 76 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g-~~Gel~i~gp---~~~~GY~~~~~~~~~~t 76 (133)
|||++..++....... +.++++++.|.+++.+.|+| ++|++++.+ +.|+|+++.| ++++.| |+|+++.
T Consensus 394 qtEtG~~~i~~~~g~~---p~~pg~~~~p~~g~~v~i~d-e~g~~~~~~~~~G~l~~~~~~P~~~~r~~----~~n~erf 465 (626)
T KOG1175|consen 394 QTETGGICITPKPGKL---PIKPGSAGKPFPGYDVQILD-ENGNELPPSTGNGELRLKPPWPPGMFRTL----WGNHERF 465 (626)
T ss_pred eeccCceeeeccCCCC---CcCccccCCCCCCcceEEEC-CCCCCcCCCCceeEEEEeCCCCccccccc----cCCHHHh
Confidence 6899988777653221 57889999999999999999 589999887 8899999974 678888 9999865
Q ss_pred HHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 77 EEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 77 ~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
..++... ..|+|.| ||.|++|+||++ ++||.||+||++|.
T Consensus 466 ~~~yf~k------~pg~y~t---------GD~~~rd~dGY~~i~GR~DDviNvsGh 506 (626)
T KOG1175|consen 466 RAAYFKK------FPGYYFT---------GDGGRRDEDGYYWILGRVDDVINVSGH 506 (626)
T ss_pred hhhhccc------CCceEEe---------cCceEEcCCceEEEEecccccccccce
Confidence 5554322 2467777 999999999999 99999999999885
No 109
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.69 E-value=5.5e-17 Score=130.16 Aligned_cols=116 Identities=19% Similarity=0.280 Sum_probs=83.4
Q ss_pred CCCCCcccccccCCCCCC---CCCCCCccccCCCCcEEEEEcCCCCccCC--CCCCeEEEEEcCccccccccccCCCchh
Q 032813 1 MTEAGPVLSMCLGFAKQP---FPTKSGSCGTVVRNAELKVIDPEIGASLP--HNQPGEICIRGPQIMKVAELEFWSDGGH 75 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~---~~~~~~~vG~p~p~~~v~i~d~~~g~~~~--~g~~Gel~i~gp~~~~GY~~~~~~~~~~ 75 (133)
+||++..++......... ......++|++.++++++|+| + +.+++ .+..|||+|+|++++.|| |++++.
T Consensus 332 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~~~~gY----~~~~~~ 405 (576)
T PRK05620 332 MTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNWVTASY----YHSPTE 405 (576)
T ss_pred ccccccceeeeccCCccccccccccccccCCcCCceeEEEec-C-CccccCCCCCceEEEEEcCcccccc----cCCccc
Confidence 588876554432110000 011234789999999999999 4 66664 468899999999999999 999988
Q ss_pred h----HHHHhhhhc-----ccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 76 D----EEIIKLNRL-----TMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 76 t----~~~f~~~~~-----~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
+ +..|..+.. .+. .++||+| ||++++++||++ |+||.||+||++|..
T Consensus 406 t~~~~~~~f~~~~~~~~~~~~~-~~g~~~T---------GD~~~~~~dg~l~~~GR~~d~i~~~G~~ 462 (576)
T PRK05620 406 EGGGAASTFRGEDVEDANDRFT-ADGWLRT---------GDVGSVTRDGFLTIHDRARDVIRSGGEW 462 (576)
T ss_pred cccccccccccccchhhhcccc-cCCcEec---------CceEEEcCCceEEEEechhhhhhcCCEE
Confidence 7 444431110 011 3578888 999999999999 999999999998753
No 110
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.66 E-value=1.9e-16 Score=123.69 Aligned_cols=90 Identities=20% Similarity=0.230 Sum_probs=72.5
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++... .....++|+|+++++++|++ |||+|+|+.++.|| |++++.+....
T Consensus 273 ~tE~~~~~~~~~-------~~~~~~~G~~~~~~~~~i~~------------gel~v~g~~~~~gY----~~~~~~~~~~~ 329 (458)
T PRK09029 273 LTEMASTVCAKR-------ADGLAGVGSPLPGREVKLVD------------GEIWLRGASLALGY----WRQGQLVPLVN 329 (458)
T ss_pred ccccCcceeccC-------CCCCCCCCCCCCCCEEEEeC------------CEEEEecCceeeee----ecCcccccccc
Confidence 578765433321 11235699999999999986 89999999999999 88888765332
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.++||+| ||+|++| +|++ |+||+||+||++|..
T Consensus 330 ---------~~~~~~T---------GD~~~~~-~g~l~~~gR~~d~i~~~G~~ 363 (458)
T PRK09029 330 ---------DEGWFAT---------RDRGEWQ-NGELTILGRLDNLFFSGGEG 363 (458)
T ss_pred ---------CCCccCC---------CCcEEEe-CCEEEEecccccceeeCCEE
Confidence 4689999 9999999 9999 999999999999853
No 111
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=99.65 E-value=2.9e-16 Score=125.12 Aligned_cols=84 Identities=24% Similarity=0.344 Sum_probs=70.9
Q ss_pred CCccccCCCCcEEEEEcCCCCccCCCC--CCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCC
Q 032813 23 SGSCGTVVRNAELKVIDPEIGASLPHN--QPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAE 100 (133)
Q Consensus 23 ~~~vG~p~p~~~v~i~d~~~g~~~~~g--~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~ 100 (133)
..++|+|+++++++|+| +++++++.+ ..|||+|+|++++.|| |++. ...+. .++||+|
T Consensus 355 ~~~~G~~~~g~~i~v~d-~~~~~~~~~~~~~Gel~i~g~~~~~gy----~~~~---~~~~~--------~~~~~~T---- 414 (542)
T PRK06018 355 LQKQGYPPFGVEMKITD-DAGKELPWDGKTFGRLKVRGPAVAAAY----YRVD---GEILD--------DDGFFDT---- 414 (542)
T ss_pred cccCCCCCCCcEEEEEC-CCCCCCCCCCCceeEEEEecCCcchhh----hcCc---ccEec--------CCcEEEc----
Confidence 35799999999999999 578888763 6799999999999999 7632 22222 4689999
Q ss_pred CCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 101 PGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 101 ~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
||+++++++|++ ++||.+|+||++|.
T Consensus 415 -----GDl~~~~~~g~~~~~GR~~d~i~~~G~ 441 (542)
T PRK06018 415 -----GDVATIDAYGYMRITDRSKDVIKSGGE 441 (542)
T ss_pred -----CCEEEEcCCccEEEEecCCCeEEECCE
Confidence 999999999999 99999999999885
No 112
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.65 E-value=7.8e-16 Score=127.24 Aligned_cols=111 Identities=17% Similarity=0.132 Sum_probs=77.8
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCC--CeEEEEEcCc--cccccccccCCCchhh
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQ--PGEICIRGPQ--IMKVAELEFWSDGGHD 76 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~--~Gel~i~gp~--~~~GY~~~~~~~~~~t 76 (133)
+||++..+..... ......+++|+|+++++++|+| ++|++++.|+ .|||+|+++. ...+| +++. .+
T Consensus 506 ~TE~~~~~~~~~~----~~~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~~~~~~~~~----~~~~-~~ 575 (728)
T PLN03052 506 GTELGGGFVTGSL----LQPQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGELALFPLMFGASSTL----LNAD-HY 575 (728)
T ss_pred ChhhCcccccCCC----CCCCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEEEEeCCCCCCCccc----cCch-hh
Confidence 5888654333211 1124567899999999999999 6899999986 5999998653 33466 6653 33
Q ss_pred HHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 77 EEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 77 ~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
...|. ..+... ...|++| ||++++|++|+| |+||+||+||+.|..
T Consensus 576 ~~yf~-~~p~~~-g~~~~~t---------GDl~~~d~dG~l~i~GR~Dd~I~~~G~r 621 (728)
T PLN03052 576 KVYFK-GMPVFN-GKILRRH---------GDIFERTSGGYYRAHGRADDTMNLGGIK 621 (728)
T ss_pred hhhhh-cCCCCC-CCEEEec---------CceEEECCCCeEEEEecCCCEEeeCCEE
Confidence 33442 111110 1236777 999999999999 999999999999863
No 113
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.65 E-value=7.6e-16 Score=119.04 Aligned_cols=100 Identities=18% Similarity=0.233 Sum_probs=76.9
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++.... .....+ .++|+|+++++++|...+. ++.|||+|+++.++.|| |++++.+...+
T Consensus 252 ~tE~~~~~~~~~~---~~~~~~-~~~G~~~~~~~~~i~~~~~------~~~Gel~v~~~~~~~gy----~~~~~~~~~~~ 317 (436)
T TIGR01923 252 MTETCSQVTTATP---EMLHAR-PDVGRPLAGREIKIKVDNK------EGHGEIMVKGANLMKGY----LYQGELTPAFE 317 (436)
T ss_pred CCccchhccCcCc---cccccc-cCCCccCCCcEEEEEeCCC------CCceEEEEECCccchhh----CCChhhhhhhh
Confidence 5888765443321 111122 2599999999999943122 27799999999999999 89887776655
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.++||+| ||++++++||++ ++||.+|+||++|..
T Consensus 318 ---------~~~~~~T---------GD~~~~~~dg~~~~~GR~~d~i~~~G~~ 352 (436)
T TIGR01923 318 ---------QQGWFNT---------GDIGELDGEGFLYVLGRRDDLIISGGEN 352 (436)
T ss_pred ---------cCCCeec---------cceEEEcCCCCEEEeccccCeEEeCCEe
Confidence 4689999 999999999999 999999999999863
No 114
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.63 E-value=7.7e-16 Score=130.85 Aligned_cols=98 Identities=22% Similarity=0.231 Sum_probs=71.7
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCc-EEEEE-----------cCCCC--ccCCCCCCeEEEEEcCccccccc
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNA-ELKVI-----------DPEIG--ASLPHNQPGEICIRGPQIMKVAE 66 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~-~v~i~-----------d~~~g--~~~~~g~~Gel~i~gp~~~~GY~ 66 (133)
|||++..++ .. ...+.+++|+|+|++ +++|. | ++| ++++.|+.|||+++++. |
T Consensus 753 ~TE~~~~~~-~~------~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d-~~G~~~~~~~ge~Gel~~~~~~----~- 819 (994)
T PRK07868 753 TTDGQAVLA-NV------SGAKIGSKGRPLPGAGRVELAAYDPEHDLILED-DRGFVRRAEVNEVGVLLARARG----P- 819 (994)
T ss_pred ccccccccc-cc------CCCCCcccCCccCCCCceeEEEecCcCCceeec-CCceEEEcCCCCceEEEEecCC----C-
Confidence 689765332 11 123567999999997 66653 3 345 67889999999999984 4
Q ss_pred cccCCCchhhHH--HHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 67 LEFWSDGGHDEE--IIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 67 ~~~~~~~~~t~~--~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
+ +|+.+.. .|. ..+|||+| ||+|++|+||+| |+||+|||||+.+.
T Consensus 820 ---~-~p~~t~~~~~~~-------~~dgw~~T---------GDlg~~d~dG~l~~~GR~dd~Ik~~G~ 867 (994)
T PRK07868 820 ---I-DPTASVKRGVFA-------PADTWIST---------EYLFRRDDDGDYWLVDRRGSVIRTARG 867 (994)
T ss_pred ---C-ChhhhhHhcccc-------cCCEEEec---------cceEEEcCCCCEEEeccCCCEEEeCCc
Confidence 4 4544332 231 13689999 999999999999 99999999999664
No 115
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.60 E-value=4.4e-15 Score=119.74 Aligned_cols=72 Identities=15% Similarity=0.084 Sum_probs=59.4
Q ss_pred cCCCCCCeEEE--EEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEee
Q 032813 45 SLPHNQPGEIC--IRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKR 121 (133)
Q Consensus 45 ~~~~g~~Gel~--i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR 121 (133)
++++|+.|||+ |++++++.|| ++++.+.+.|..+.. ...++||+| ||+|++|+||+| ++||
T Consensus 397 ~~~~g~~Gel~~~i~~~~~~~GY-----~~~~~t~~~~~~~~~--~~~~~~~~T---------GDlg~~~~dG~l~~~GR 460 (600)
T PRK08279 397 KVKPGEVGLLIGRITDRGPFDGY-----TDPEASEKKILRDVF--KKGDAWFNT---------GDLMRDDGFGHAQFVDR 460 (600)
T ss_pred cCCCCCceeEEEEecCccccccc-----CCchhhHHHHhhccc--CCCCceEee---------cceEEEcCCccEEEecc
Confidence 57889999998 7799999998 677888888753211 113579999 999999999999 9999
Q ss_pred cCCeEEeCCCC
Q 032813 122 KKVWVRFDPLF 132 (133)
Q Consensus 122 ~dd~Iki~~~~ 132 (133)
.||+||++|..
T Consensus 461 ~~d~ik~~G~~ 471 (600)
T PRK08279 461 LGDTFRWKGEN 471 (600)
T ss_pred cCCeEEECCcc
Confidence 99999999864
No 116
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.58 E-value=5.2e-15 Score=120.03 Aligned_cols=87 Identities=24% Similarity=0.196 Sum_probs=79.2
Q ss_pred CCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCC
Q 032813 23 SGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPG 102 (133)
Q Consensus 23 ~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~ 102 (133)
..++|+|+++.++.|+| +.++++|.|..|||+|.|..+++|| +++|+.|+++|.. +.+|+|
T Consensus 540 ~~piG~p~~n~~~~ild-~~~~~~p~gv~gel~i~g~~~a~gy----~~~p~lt~~~f~~--------~~~y~t------ 600 (642)
T COG1020 540 RVPIGRPVANTQLYILD-QGLRPLPLGVPGELYIAGLGLALGY----LNRPDLTAERFIA--------LRLYRT------ 600 (642)
T ss_pred CCCcceeeCCCeEEEEC-CCCCcCCCCCCeeeEECCcchhhhh----cCChhhhHHHhhh--------ccCccC------
Confidence 56899999999999999 7899999999999999999999999 9999999999972 114455
Q ss_pred CCCCcEEEEcCCCeE-EEeecCCeEEeCCC
Q 032813 103 RWAFDLALRTRAGYE-LKKRKKVWVRFDPL 131 (133)
Q Consensus 103 ~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~ 131 (133)
||++++.+||.+ ++||.|++||++|.
T Consensus 601 ---gD~~r~~~dg~~e~lgr~D~qvki~g~ 627 (642)
T COG1020 601 ---GDLARPLADGALEYLGRKDSQVKIRGF 627 (642)
T ss_pred ---CCeeeECCCCeEEEeccccceeEeceE
Confidence 999999999999 99999999999874
No 117
>PRK07798 acyl-CoA synthetase; Validated
Probab=99.56 E-value=1.7e-14 Score=113.86 Aligned_cols=85 Identities=20% Similarity=0.102 Sum_probs=71.8
Q ss_pred cCCCCcEEEEEcCCCCccCCCCCC--eEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCCC
Q 032813 28 TVVRNAELKVIDPEIGASLPHNQP--GEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRWA 105 (133)
Q Consensus 28 ~p~p~~~v~i~d~~~g~~~~~g~~--Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~t 105 (133)
++.++..++|++ +++++++.|+. |+|+ +++.++.|| +++++.+++.|... ...+||+|
T Consensus 353 ~~~~~~~~~i~~-~~~~~~~~g~~~~g~l~-~~~~~~~gy----~~~~~~t~~~f~~~-----~~~~~~~T--------- 412 (533)
T PRK07798 353 RFTIGPRTVVLD-EDGNPVEPGSGEIGWIA-RRGHIPLGY----YKDPEKTAETFPTI-----DGVRYAIP--------- 412 (533)
T ss_pred ccCCCceEEEEC-CCCCCCCCCCCCeeEEE-eecCccccc----cCChhhhHHhhccC-----CCCceEEc---------
Confidence 788999999999 57889999987 6665 556789999 99999999988521 12468998
Q ss_pred CcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 106 FDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 106 GD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||++++|++|+| ++||+||+||++|.+
T Consensus 413 GD~~~~~~~g~l~~~GR~~~~i~~~G~~ 440 (533)
T PRK07798 413 GDRARVEADGTITLLGRGSVCINTGGEK 440 (533)
T ss_pred CcEEEEcCCCcEEEEccccceEecCCEE
Confidence 999999999999 999999999998854
No 118
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.56 E-value=7.2e-15 Score=111.61 Aligned_cols=72 Identities=22% Similarity=0.251 Sum_probs=61.5
Q ss_pred ccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCC
Q 032813 25 SCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRW 104 (133)
Q Consensus 25 ~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~ 104 (133)
..|+|+++++++|.+ |||+++|+.++.|| +++++.+ .|. .++||+|
T Consensus 193 ~~G~~~~g~~v~i~~------------Gei~v~g~~~~~gY----~~~~~~~--~~~--------~~g~~~T-------- 238 (358)
T PRK07824 193 YDGVPLDGVRVRVED------------GRIALGGPTLAKGY----RNPVDPD--PFA--------EPGWFRT-------- 238 (358)
T ss_pred cCceeCCCCEEEecC------------CEEEEecCcccccc----CCCcccc--ccc--------CCCceec--------
Confidence 368999999999843 89999999999999 8887643 332 4579999
Q ss_pred CCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 105 AFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 105 tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||++++ ++|+| ++||.||+||++|.+
T Consensus 239 -GDl~~~-~~g~l~i~GR~~d~i~~~G~~ 265 (358)
T PRK07824 239 -DDLGAL-DDGVLTVLGRADDAISTGGLT 265 (358)
T ss_pred -ccEEEE-eCCEEEEEeccCCeEEECCEE
Confidence 999999 89999 999999999998864
No 119
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.29 E-value=1.2e-11 Score=95.72 Aligned_cols=78 Identities=18% Similarity=0.091 Sum_probs=60.5
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||+++..... ......++|+|+|++++++.+ + .++.|||++++.
T Consensus 245 ~tE~~~~~~~~-------~~~~~~~~G~p~~~~~~~~~~-~------~~~~gel~v~~~--------------------- 289 (414)
T PRK08308 245 CSEAGCVSICP-------DMKSHLDLGNPLPHVSVSAGS-D------ENAPEEIVVKMG--------------------- 289 (414)
T ss_pred ccccCCeeecC-------CCCCCCccCccCCCeEEEEec-C------CCCCceEEEEcC---------------------
Confidence 58887433211 123457899999999999876 2 356799999642
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
++||+| ||+|++|+||++ ++||.||+||++|..
T Consensus 290 ----------~~~~~T---------GDl~~~~~dg~l~~~GR~~~~ik~~G~~ 323 (414)
T PRK08308 290 ----------DKEIFT---------KDLGYKSERGTLHFMGRMDDVINVSGLN 323 (414)
T ss_pred ----------CceEEC---------CceEEECCCccEEEecccCCeEEECCEE
Confidence 378999 999999999999 999999999999863
No 120
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.11 E-value=1.2e-10 Score=90.74 Aligned_cols=67 Identities=18% Similarity=0.240 Sum_probs=53.8
Q ss_pred CcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCCCCcEEEE
Q 032813 32 NAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALR 111 (133)
Q Consensus 32 ~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~ 111 (133)
...+.|+|+++++++++|+.|||++++.. +++| ..+||+| ||++++
T Consensus 254 ~~~~eivd~~~g~~v~~Ge~Gelvvt~~~----------------~~~~---------p~~ry~T---------GDl~~~ 299 (422)
T TIGR02155 254 HFYPEIIDPHTGEVLPDGEEGELVFTTLT----------------KEAL---------PVIRYRT---------RDLTRL 299 (422)
T ss_pred eeEEEEECCCCCCCCCCCCeeEEEEecCC----------------cccc---------ceeeEEc---------CcEEEE
Confidence 46778999778999999999999998642 1222 2478999 999999
Q ss_pred cCC-C-----eE-EEeecCCeEEeCCCC
Q 032813 112 TRA-G-----YE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 112 d~d-G-----~l-~~GR~dd~Iki~~~~ 132 (133)
+++ | ++ +.||.||+||+.|.+
T Consensus 300 ~~~~Gr~~~~~~~i~GR~~d~i~~~G~~ 327 (422)
T TIGR02155 300 LPGTARTMRRMDRITGRSDDMLIIRGVN 327 (422)
T ss_pred ECCCCCcccccccccCccCCeEEECCEE
Confidence 886 5 56 999999999998753
No 121
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=98.39 E-value=1e-06 Score=69.56 Aligned_cols=72 Identities=17% Similarity=0.040 Sum_probs=48.5
Q ss_pred CCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCCCCcEEE
Q 032813 31 RNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLAL 110 (133)
Q Consensus 31 p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~ 110 (133)
+.+.+.|+|+++++++++|+.|||++..-.-.. .++ .+ .---|+| ||+++
T Consensus 258 d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~~~~--------~r~----~~---------PliRYrt---------gD~~~ 307 (445)
T TIGR03335 258 DLVHLDVYDPRHQRFLPDGECGRIVLTTLLKPG--------ERC----GS---------LLINYDT---------EDTTV 307 (445)
T ss_pred CceEEEEEcCCCCCCCcCCCceEEEEEecCCCC--------ccC----Cc---------eEEEeec---------CceEE
Confidence 346789999877888999999999997642100 000 00 0012566 99998
Q ss_pred EcC-C----Ce----E-EEeecCCeEEeCCCC
Q 032813 111 RTR-A----GY----E-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 111 ~d~-d----G~----l-~~GR~dd~Iki~~~~ 132 (133)
+.. + |. + .+||.||||++.|.+
T Consensus 308 ~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~ 339 (445)
T TIGR03335 308 VISRDRCPCGRTHMRILNPEREAETIWISGVP 339 (445)
T ss_pred EecCCCCCCCCCcceeCCCcccCceEEECCEE
Confidence 632 2 32 5 679999999999875
No 122
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=98.25 E-value=8.3e-06 Score=65.53 Aligned_cols=73 Identities=15% Similarity=0.101 Sum_probs=55.6
Q ss_pred cCCCCCCeEEEEE--cCcc---ccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-E
Q 032813 45 SLPHNQPGEICIR--GPQI---MKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-L 118 (133)
Q Consensus 45 ~~~~g~~Gel~i~--gp~~---~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~ 118 (133)
+|++||+|.|+-+ .... |.|| .+..++|++....+-.. ..|-||.| ||+-.+|+.|+| |
T Consensus 442 ~~~~GEpGlLv~~i~~k~P~~~F~GY----~g~~~~t~kKl~rDVFk--kGD~~f~t---------GDlLv~D~~GylYF 506 (649)
T KOG1179|consen 442 PCPPGEPGLLVGKIVQKNPLRSFLGY----AGPKKATEKKLLRDVFK--KGDVYFNT---------GDLLVADELGYLYF 506 (649)
T ss_pred ECCCCCCceEEEEeccCCchhhhccc----cCchhhhhhhhHHhhhc--cCcEEEee---------CcEEEEecCCcEEE
Confidence 6788999977543 2233 7899 88788887776544332 24568888 999999999999 9
Q ss_pred EeecCCeEEeCCCC
Q 032813 119 KKRKKVWVRFDPLF 132 (133)
Q Consensus 119 ~GR~dd~Iki~~~~ 132 (133)
.+|..|.+..+|-|
T Consensus 507 ~DRtGDTFRWKGEN 520 (649)
T KOG1179|consen 507 KDRTGDTFRWKGEN 520 (649)
T ss_pred eccCCCceeecCCc
Confidence 99999999887754
No 123
>PTZ00297 pantothenate kinase; Provisional
Probab=98.08 E-value=6.6e-06 Score=72.92 Aligned_cols=63 Identities=13% Similarity=0.030 Sum_probs=48.6
Q ss_pred cccCCCCcEEEEEcC-CCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCC
Q 032813 26 CGTVVRNAELKVIDP-EIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRW 104 (133)
Q Consensus 26 vG~p~p~~~v~i~d~-~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~ 104 (133)
.|+|+|+++++|.+. +.+.. ...|||+++ | +++|++|++.+ ++|+
T Consensus 802 ~G~PlpgvEvKI~~~~E~~~~---~~~GEIlvr-------~----~kdpe~T~e~~----------~gW~---------- 847 (1452)
T PTZ00297 802 DGTPAPSLQVDLEPFDEPSDG---AGIGQLVLA-------K----KGEPRRTLPIA----------AQWK---------- 847 (1452)
T ss_pred CCeecCceEEEEcccccccCC---CCCCeEEEE-------E----CCChHHHHHhh----------CcCc----------
Confidence 499999999999873 32221 235999994 6 68999998743 3664
Q ss_pred CCcEEEEcCCCeE-EEeecCCeEEeCC
Q 032813 105 AFDLALRTRAGYE-LKKRKKVWVRFDP 130 (133)
Q Consensus 105 tGD~g~~d~dG~l-~~GR~dd~Iki~~ 130 (133)
+||+| |+||+||+||..+
T Consensus 848 --------~dG~L~IidRkKdlikls~ 866 (1452)
T PTZ00297 848 --------RDRTLRLLGPPLGILLPVA 866 (1452)
T ss_pred --------cCCeEEEEeccccceECCC
Confidence 47999 9999999999765
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=97.94 E-value=4.3e-05 Score=65.37 Aligned_cols=96 Identities=11% Similarity=0.070 Sum_probs=68.8
Q ss_pred cccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhc-ccCCCCcccccccCCCCCC
Q 032813 26 CGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRL-TMGSSLGWASKAQAEPGRW 104 (133)
Q Consensus 26 vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~-~~~~~~gw~~t~~~~~~~~ 104 (133)
.|+..+++++.|++||+-.+|..|+.||||+++.+-+.+|++. .++ .....|...-. .......|.||
T Consensus 1155 SG~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~--~d~-~~~~~fn~rl~~g~~~~~sy~RT-------- 1223 (1363)
T KOG3628|consen 1155 SGKLPVYTDIAIVNPETKGPCRDGELGEIWVNSAHNASCSFTI--GDE-LRSNHFNARLSSGDLLGKSYART-------- 1223 (1363)
T ss_pred CCcccccceeEEeCCccccccccCCcceEEecccccccccccc--Cch-hhhhhhhhhccccccccccceee--------
Confidence 4777889999999999999999999999999999999998654 233 33333421100 00112356666
Q ss_pred CCcEEEE------cCCC----eE-EEeecCCeEEeCCCCC
Q 032813 105 AFDLALR------TRAG----YE-LKKRKKVWVRFDPLFF 133 (133)
Q Consensus 105 tGD~g~~------d~dG----~l-~~GR~dd~Iki~~~~~ 133 (133)
||+|.+ ++++ .| ++|=.++.+-++|+.|
T Consensus 1224 -G~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h 1262 (1363)
T KOG3628|consen 1224 -GDLGFLRRTSLTDANVERHDLLYVLGAIDETLELNGLRH 1262 (1363)
T ss_pred -eeeeeeeeeecccccceeeeeEEEeecccceeeecCccc
Confidence 999975 3333 25 8899999999999865
No 125
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=97.69 E-value=3.1e-05 Score=60.25 Aligned_cols=28 Identities=14% Similarity=0.011 Sum_probs=25.9
Q ss_pred CCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 105 AFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 105 tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
|||++++|++|+| |+||+||+||+.|.+
T Consensus 279 tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~ 307 (386)
T TIGR02372 279 LQDRLAWDKDGGFTILGRKDEILQVGGVN 307 (386)
T ss_pred cCceEEEcCCCcEEEecccCCEEEECCEE
Confidence 3999999999999 999999999998853
No 126
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.65 E-value=3e-05 Score=66.46 Aligned_cols=35 Identities=9% Similarity=-0.137 Sum_probs=30.8
Q ss_pred cCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 98 QAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 98 ~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
...|+|+|||.++.-.+|.+ +.||.|++||++|..
T Consensus 451 ~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~R 486 (1032)
T KOG1178|consen 451 VKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVR 486 (1032)
T ss_pred chhhcccccccceeecCCCEEEEEeccceEEEccEE
Confidence 44578888999998889999 999999999999864
No 127
>PRK09188 serine/threonine protein kinase; Provisional
Probab=97.64 E-value=3.9e-05 Score=59.37 Aligned_cols=25 Identities=12% Similarity=0.050 Sum_probs=23.4
Q ss_pred CCcccccccCCCCCCCCcEEEE-cCCCeE-EEeecC
Q 032813 90 SLGWASKAQAEPGRWAFDLALR-TRAGYE-LKKRKK 123 (133)
Q Consensus 90 ~~gw~~t~~~~~~~~tGD~g~~-d~dG~l-~~GR~d 123 (133)
.+|||+| ||+|++ |++|+| |+||.|
T Consensus 207 ~dgW~~T---------GDlg~~~d~dG~l~~~gR~~ 233 (365)
T PRK09188 207 SRIWLAT---------GKKVYNFITRGLFSWSDGEG 233 (365)
T ss_pred cCcEEeC---------CCEEEEEcCCCeEEEEecCc
Confidence 5799999 999998 799999 999998
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=97.24 E-value=0.00066 Score=53.58 Aligned_cols=69 Identities=20% Similarity=0.280 Sum_probs=51.0
Q ss_pred CCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCCCCcEEE
Q 032813 31 RNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLAL 110 (133)
Q Consensus 31 p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~ 110 (133)
+..-+.|+||++++.++.|+.|||++..=. +.. + .---|+| ||+.+
T Consensus 266 D~~~~Ei~dP~t~e~l~dge~GelV~T~L~--~~~--------------~---------PlIRYrt---------gDit~ 311 (438)
T COG1541 266 DHFIFEIVDPETGEQLPDGERGELVITTLT--KEG--------------M---------PLIRYRT---------GDITV 311 (438)
T ss_pred hhceeeeecCCcCccCCCCCeeEEEEEecc--ccC--------------c---------ceEEEEc---------CCeeE
Confidence 456788999999999999999999996421 111 0 0012566 99999
Q ss_pred EcCC----Ce----E--EEeecCCeEEeCCCCC
Q 032813 111 RTRA----GY----E--LKKRKKVWVRFDPLFF 133 (133)
Q Consensus 111 ~d~d----G~----l--~~GR~dd~Iki~~~~~ 133 (133)
+.++ |. + +.||.|||+++.|+++
T Consensus 312 i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~v 344 (438)
T COG1541 312 ILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNV 344 (438)
T ss_pred ecccCCCCCCccccccccCcccccEEEECCEEe
Confidence 8772 32 3 8899999999999764
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=97.18 E-value=0.0005 Score=59.15 Aligned_cols=92 Identities=16% Similarity=0.147 Sum_probs=62.2
Q ss_pred cccCCCC-cEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCC
Q 032813 26 CGTVVRN-AELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRW 104 (133)
Q Consensus 26 vG~p~p~-~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~ 104 (133)
+|...|+ +.+.|+++++.+.|.++++|||||.++++..+| |.-+..|...|...... ..+ .-....++-|
T Consensus 504 ~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~~~----~al~~~t~~~F~~~~~~---s~~--~~~~n~~FmR 574 (1363)
T KOG3628|consen 504 VLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLGKLF----YALDKQTENTFKATPVE---SSG--KPPSNVPFMR 574 (1363)
T ss_pred cceecccceEEEEeCCCcccccccCcceeEEEecCCcccce----eeccccccceEEeeecc---ccC--CCCccchhhh
Confidence 5555554 577788888889999999999999999999999 77777777776421110 011 0011223334
Q ss_pred CCcEEEEcCCCeEEEeecCCeE
Q 032813 105 AFDLALRTRAGYELKKRKKVWV 126 (133)
Q Consensus 105 tGD~g~~d~dG~l~~GR~dd~I 126 (133)
||=+|++.+++.+++|=+.|++
T Consensus 575 tGLlGFv~~gki~vl~~k~d~l 596 (1363)
T KOG3628|consen 575 TGLLGFVHNGKIYVLGLKEDGL 596 (1363)
T ss_pred hcceeeeeCCeEEEEEechhhh
Confidence 5999999988777555554543
No 130
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=95.40 E-value=0.095 Score=40.78 Aligned_cols=55 Identities=22% Similarity=0.201 Sum_probs=41.3
Q ss_pred EEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCC
Q 032813 35 LKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRA 114 (133)
Q Consensus 35 v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~d 114 (133)
|.|+|+++.++++.|+.|-|-+-.+... .| -+..-| .|+|.+..+
T Consensus 287 V~iRDp~tl~~~~~Ge~Gli~vidl~~~-s~-------------------------p~~IlT---------eDlGvl~~~ 331 (365)
T PF04443_consen 287 VIIRDPETLEPLPPGETGLIQVIDLANT-SY-------------------------PGFILT---------EDLGVLHGD 331 (365)
T ss_pred EEEECCCCCcCCCCCCeeEEEEEccccc-CC-------------------------CcEEEE---------cceeeecCC
Confidence 7888999999999999999988776422 23 133457 999987654
Q ss_pred --------CeE-EEeecCC
Q 032813 115 --------GYE-LKKRKKV 124 (133)
Q Consensus 115 --------G~l-~~GR~dd 124 (133)
.++ ++||.+.
T Consensus 332 ~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 332 DDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred CCCCCccCCEEEEEeCCCC
Confidence 268 9999873
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=85.98 E-value=0.66 Score=36.92 Aligned_cols=27 Identities=11% Similarity=0.150 Sum_probs=20.1
Q ss_pred CCCCCcEEEEcCC----Ce----E--EEeecCCeEEe
Q 032813 102 GRWAFDLALRTRA----GY----E--LKKRKKVWVRF 128 (133)
Q Consensus 102 ~~~tGD~g~~d~d----G~----l--~~GR~dd~Iki 128 (133)
-|+|||++...++ |. | +.||.+|+|++
T Consensus 296 RYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~ 332 (430)
T TIGR02304 296 RYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQL 332 (430)
T ss_pred eeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEE
Confidence 3556999887544 32 4 78999999986
No 132
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=55.28 E-value=10 Score=23.69 Aligned_cols=35 Identities=26% Similarity=0.290 Sum_probs=22.7
Q ss_pred CccccCCCCcEEEEEcCCCCccCCCC---CCeEEEEEc
Q 032813 24 GSCGTVVRNAELKVIDPEIGASLPHN---QPGEICIRG 58 (133)
Q Consensus 24 ~~vG~p~p~~~v~i~d~~~g~~~~~g---~~Gel~i~g 58 (133)
.+-|+|+++++|++.+...++++..+ ..|...+..
T Consensus 22 L~tg~Pv~ga~V~l~~~~~~~~l~~g~TD~~G~a~~~~ 59 (97)
T PF11974_consen 22 LSTGKPVAGAEVELYDSRNGQVLASGKTDADGFASFDS 59 (97)
T ss_pred CCCCCccCCCEEEEEECCCCcEeeeeeeCCCceEEecC
Confidence 46799999999999983345555433 335444443
No 133
>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []. The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space
Probab=48.03 E-value=16 Score=21.84 Aligned_cols=24 Identities=13% Similarity=0.246 Sum_probs=19.6
Q ss_pred EEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 109 ALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 109 g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
..-|++|.+ +.|...+.-.|+|..
T Consensus 33 ~~Td~~G~F~l~G~~~e~~~i~P~l 57 (80)
T PF01060_consen 33 TKTDSDGNFELSGSTNEFTTIEPYL 57 (80)
T ss_pred EEECCCceEEEEEEccCCccccEEE
Confidence 466899999 999999988777753
No 134
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=44.62 E-value=20 Score=29.99 Aligned_cols=28 Identities=18% Similarity=0.068 Sum_probs=21.6
Q ss_pred CCCCcEEEEcCCC----eE-EEeecCCeEEeCC
Q 032813 103 RWAFDLALRTRAG----YE-LKKRKKVWVRFDP 130 (133)
Q Consensus 103 ~~tGD~g~~d~dG----~l-~~GR~dd~Iki~~ 130 (133)
|+.||+.++..-- .| |+||.+.++++.|
T Consensus 410 Y~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~G 442 (597)
T PLN02249 410 YRVGDILRVTGFHNSAPQFKFIRRKNVLLSIES 442 (597)
T ss_pred eecCCEEEEeeccCCCcEEEEEccCCcceeccc
Confidence 3459999886532 37 9999999998876
No 135
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=42.48 E-value=24 Score=19.66 Aligned_cols=17 Identities=6% Similarity=-0.011 Sum_probs=14.0
Q ss_pred CcEEEEcCCCeE-EEeec
Q 032813 106 FDLALRTRAGYE-LKKRK 122 (133)
Q Consensus 106 GD~g~~d~dG~l-~~GR~ 122 (133)
|.+.+.++||.+ |.|+.
T Consensus 33 ~~i~Y~~~dg~yli~G~l 50 (57)
T PF10411_consen 33 GGILYVDEDGRYLIQGQL 50 (57)
T ss_dssp TEEEEEETTSSEEEES-E
T ss_pred CeEEEEcCCCCEEEEeEE
Confidence 889999999988 88754
No 136
>PF11347 DUF3148: Protein of unknown function (DUF3148); InterPro: IPR021495 This family of proteins has no known function.
Probab=35.23 E-value=62 Score=18.73 Aligned_cols=34 Identities=18% Similarity=0.148 Sum_probs=21.5
Q ss_pred cccccccCCCCCCCCcEEEEcCCCeEEEeecCCe
Q 032813 92 GWASKAQAEPGRWAFDLALRTRAGYELKKRKKVW 125 (133)
Q Consensus 92 gw~~t~~~~~~~~tGD~g~~d~dG~l~~GR~dd~ 125 (133)
-|++|+++.++.|--|+...++.|.++-=|-.|.
T Consensus 13 pylKTAdpMPmLRp~dlv~~ge~G~i~~rrp~~~ 46 (63)
T PF11347_consen 13 PYLKTADPMPMLRPPDLVKIGEVGRIVDRRPGDY 46 (63)
T ss_pred CceeccCCccccCCcCccccCCcEEEEEecCCCE
Confidence 3567777777777677777777665543344443
No 137
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=32.85 E-value=97 Score=25.42 Aligned_cols=25 Identities=12% Similarity=-0.106 Sum_probs=19.5
Q ss_pred CcEEEEcC--CC--eE-EEeecCCeEEeCC
Q 032813 106 FDLALRTR--AG--YE-LKKRKKVWVRFDP 130 (133)
Q Consensus 106 GD~g~~d~--dG--~l-~~GR~dd~Iki~~ 130 (133)
||+.+... +. .+ |+||.+.++++.|
T Consensus 374 GDvVrv~gf~~~~P~i~F~~R~~~~l~l~g 403 (528)
T PF03321_consen 374 GDVVRVTGFYNQTPRIEFVGRRGQVLSLFG 403 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEEETTEEE-SSS
T ss_pred CCEEEEeeccCCCcEEEEeccCCceeecce
Confidence 99998754 34 58 9999999998876
No 138
>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length. Members of this family appear to be Actinomycete specific. The function of this family is unknown.
Probab=30.81 E-value=53 Score=20.19 Aligned_cols=19 Identities=26% Similarity=0.398 Sum_probs=15.2
Q ss_pred ccccCCCCcEEEEEcCCCCc
Q 032813 25 SCGTVVRNAELKVIDPEIGA 44 (133)
Q Consensus 25 ~vG~p~p~~~v~i~d~~~g~ 44 (133)
.-|.|+++.-++++| .+|+
T Consensus 16 ~~G~Pv~gAyVRLLD-~sgE 34 (85)
T PF07210_consen 16 RDGEPVGGAYVRLLD-SSGE 34 (85)
T ss_pred cCCcCCCCeEEEEEc-CCCC
Confidence 458899999999999 4443
No 139
>PF09956 DUF2190: Uncharacterized conserved protein (DUF2190); InterPro: IPR011231 This entry is represented by Bacteriophage VT1-Sakai, H0018. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This is a family of uncharacterised conserved proteins.
Probab=28.52 E-value=42 Score=21.44 Aligned_cols=14 Identities=21% Similarity=0.401 Sum_probs=11.4
Q ss_pred CCCCCCeEEEEEcC
Q 032813 46 LPHNQPGEICIRGP 59 (133)
Q Consensus 46 ~~~g~~Gel~i~gp 59 (133)
.+.|+.|++.+.|-
T Consensus 38 ~~~Ge~g~~~~~GV 51 (106)
T PF09956_consen 38 AAAGETGELHTEGV 51 (106)
T ss_pred cCCCCeEEEEEEEE
Confidence 57788999998874
No 140
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=28.29 E-value=52 Score=27.70 Aligned_cols=28 Identities=21% Similarity=0.163 Sum_probs=20.4
Q ss_pred CCCCcEEEEcC----CCeE-EEeecCCeEEeCC
Q 032813 103 RWAFDLALRTR----AGYE-LKKRKKVWVRFDP 130 (133)
Q Consensus 103 ~~tGD~g~~d~----dG~l-~~GR~dd~Iki~~ 130 (133)
|+.||+.+... -=.+ |++|.+.+..|++
T Consensus 417 YrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~g 449 (606)
T PLN02247 417 YRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDT 449 (606)
T ss_pred EecCCEEEEeeecCCCceEEEEecCCceeeccc
Confidence 33599988643 2248 9999999888775
No 141
>PF02261 Asp_decarbox: Aspartate decarboxylase; InterPro: IPR003190 Decarboxylation of aspartate is the major route of alanine production in bacteria, and is catalysed by the enzyme aspartate decarboxylase. The enzyme is translated as an inactive proenzyme of two chains, A and B. This family contains both chains of aspartate decarboxylase.; GO: 0004068 aspartate 1-decarboxylase activity, 0006523 alanine biosynthetic process; PDB: 1PYU_C 1AW8_A 1PYQ_B 3TM7_C 1PT1_A 1PQH_A 1PPY_B 1PT0_B 1PQF_A 1PQE_A ....
Probab=27.25 E-value=75 Score=20.74 Aligned_cols=32 Identities=19% Similarity=0.541 Sum_probs=19.7
Q ss_pred CCCCcEEEEEcCCCCccCC----CCC--CeEEEEEcCc
Q 032813 29 VVRNAELKVIDPEIGASLP----HNQ--PGEICIRGPQ 60 (133)
Q Consensus 29 p~p~~~v~i~d~~~g~~~~----~g~--~Gel~i~gp~ 60 (133)
-+|+-++.|++..+|+... +|+ .|+||+.|+.
T Consensus 38 i~p~E~V~V~Nv~nG~Rf~TYvI~g~~GSg~I~lNGaA 75 (116)
T PF02261_consen 38 ILPYEQVQVVNVNNGERFETYVIPGERGSGVICLNGAA 75 (116)
T ss_dssp --TTBEEEEEETTT--EEEEEEEEESTTTT-EEEEGGG
T ss_pred CCcCCEEEEEECCCCcEEEEEEEEccCCCcEEEECCHH
Confidence 3588899999987786542 233 3899999875
No 142
>PF10670 DUF4198: Domain of unknown function (DUF4198)
Probab=27.18 E-value=39 Score=23.50 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=19.7
Q ss_pred cccCCCCcEEEEEcCCC-------CccCCCCCCeEEEEEc
Q 032813 26 CGTVVRNAELKVIDPEI-------GASLPHNQPGEICIRG 58 (133)
Q Consensus 26 vG~p~p~~~v~i~d~~~-------g~~~~~g~~Gel~i~g 58 (133)
-|+|+++.+|.+..... ...+..+..|.+.|.-
T Consensus 160 ~GkPl~~a~V~~~~~~~~~~~~~~~~~~~TD~~G~~~~~~ 199 (215)
T PF10670_consen 160 DGKPLAGAEVEAFSPGGWYDVEHEAKTLKTDANGRATFTL 199 (215)
T ss_pred CCeEcccEEEEEEECCCccccccceEEEEECCCCEEEEec
Confidence 47888888888776321 1223445567766663
No 143
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=25.81 E-value=71 Score=20.68 Aligned_cols=32 Identities=22% Similarity=0.524 Sum_probs=23.7
Q ss_pred CCCCcEEEEEcCCCCccCC----CCC--CeEEEEEcCc
Q 032813 29 VVRNAELKVIDPEIGASLP----HNQ--PGEICIRGPQ 60 (133)
Q Consensus 29 p~p~~~v~i~d~~~g~~~~----~g~--~Gel~i~gp~ 60 (133)
-+|+-++.|++..+|+... +|+ .|+|++.|+.
T Consensus 37 i~~~E~V~I~Nv~NG~Rf~TYvI~g~~gSg~I~lNGAA 74 (111)
T cd06919 37 ILPYEKVLVVNVNNGARFETYVIPGERGSGVICLNGAA 74 (111)
T ss_pred CCCCCEEEEEECCCCcEEEEEEEEcCCCCCEEEeCCHH
Confidence 3588899999987787543 344 5999999864
No 144
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=25.17 E-value=86 Score=14.45 Aligned_cols=21 Identities=14% Similarity=0.175 Sum_probs=14.6
Q ss_pred cEEEEcCCCeE-EEeecCCeEEe
Q 032813 107 DLALRTRAGYE-LKKRKKVWVRF 128 (133)
Q Consensus 107 D~g~~d~dG~l-~~GR~dd~Iki 128 (133)
+++. +++|.+ +.++....|++
T Consensus 6 gvav-~~~g~i~VaD~~n~rV~v 27 (28)
T PF01436_consen 6 GVAV-DSDGNIYVADSGNHRVQV 27 (28)
T ss_dssp EEEE-ETTSEEEEEECCCTEEEE
T ss_pred EEEE-eCCCCEEEEECCCCEEEE
Confidence 3443 488998 88888777753
No 145
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=24.98 E-value=70 Score=26.98 Aligned_cols=28 Identities=21% Similarity=0.023 Sum_probs=20.4
Q ss_pred CCCCcEEEEcC----CCeE-EEeecCCeEEeCC
Q 032813 103 RWAFDLALRTR----AGYE-LKKRKKVWVRFDP 130 (133)
Q Consensus 103 ~~tGD~g~~d~----dG~l-~~GR~dd~Iki~~ 130 (133)
|+.||+.+... -=.+ |++|.+-+..|++
T Consensus 423 YrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~g 455 (612)
T PLN02620 423 YRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDS 455 (612)
T ss_pred EecCCEEEEeeecCCCceEEEEeecCceeeccc
Confidence 33599988753 2248 9999998888775
No 146
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=24.97 E-value=74 Score=21.09 Aligned_cols=32 Identities=16% Similarity=0.512 Sum_probs=23.8
Q ss_pred CCCCcEEEEEcCCCCccCC----CCC--CeEEEEEcCc
Q 032813 29 VVRNAELKVIDPEIGASLP----HNQ--PGEICIRGPQ 60 (133)
Q Consensus 29 p~p~~~v~i~d~~~g~~~~----~g~--~Gel~i~gp~ 60 (133)
-+|+-++.|++.++|+... +|+ .|+||+.|+.
T Consensus 38 i~p~E~V~V~Nv~NG~Rf~TYvI~G~~GSg~I~lNGAA 75 (126)
T TIGR00223 38 ILENEKVDIVNVNNGKRFSTYAIAGKRGSRIICVNGAA 75 (126)
T ss_pred CCCCCEEEEEECCCCcEEEEEEEEcCCCCCEEEeCCHH
Confidence 3588899999987887553 344 5889999864
No 147
>COG4924 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.31 E-value=65 Score=24.88 Aligned_cols=30 Identities=20% Similarity=0.283 Sum_probs=16.9
Q ss_pred CCCcEEEEEcCCCCccCCCCCCeEEEEEcC
Q 032813 30 VRNAELKVIDPEIGASLPHNQPGEICIRGP 59 (133)
Q Consensus 30 ~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp 59 (133)
+|...|.|+..++--..-+--+|-|.|=|.
T Consensus 239 lP~srilivENe~sfl~lP~~pg~i~i~Ga 268 (386)
T COG4924 239 LPQSRILIVENEDSFLALPTWPGVIIIWGA 268 (386)
T ss_pred CCceeEEEEechhhhhhcCCCCCeEEEecC
Confidence 355567777632222223445688888765
No 148
>smart00701 PGRP Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. The bacteriophage molecule, but not its moth homologue, has been shown to have N-acetylmuramoyl-L-alanine amidase activity. One member of this family, Tag7, is a cytokine.
Probab=22.85 E-value=64 Score=21.54 Aligned_cols=21 Identities=19% Similarity=0.069 Sum_probs=16.5
Q ss_pred CcEEE---EcCCCeEEEeecCCeE
Q 032813 106 FDLAL---RTRAGYELKKRKKVWV 126 (133)
Q Consensus 106 GD~g~---~d~dG~l~~GR~dd~I 126 (133)
+|+|+ ++.||.++.||.-+.+
T Consensus 61 ~DIgYhflI~~dG~IyeGR~~~~~ 84 (142)
T smart00701 61 CDIGYNFLVGGDGKVYEGRGWNVV 84 (142)
T ss_pred CCcCCeEEEcCCCEEEECCCCCcc
Confidence 67764 8999999999976543
No 149
>PF01948 PyrI: Aspartate carbamoyltransferase regulatory chain, allosteric domain; InterPro: IPR020545 Aspartate carbamoyltransferase (aspartate transcarbamylase, ATCase) 2.1.3.2 from EC is an allosteric enzyme that plays a central role in the regulation of the pyrimidine pathway in bacteria. The holoenzyme is a dodecamer composed of six catalytic chains, each with an active site, and six regulatory chains lacking catalytic activity []. The catalytic subunits exist as a dimer of catalytic trimers, (c3)2, while the regulatory subunits exist as a trimer of regulatory dimers, (r2)3, therefore the complete holoenzyme can be represented as (c3)2(r2)3. The association of the catalytic subunits c3 with the regulatory subunits r2 is responsible for the establishment of positive co-operativity between catalytic sites for the binding of aspartate and it dictates the pattern of allosteric response toward nucleotide effectors. ATCase from Escherichia coli is the most extensively studied allosteric enzyme []. The crystal structure of the T-state, the T-state with CTP bound, the R-state with N-phosphonacetyl-L-aspartate (PALA) bound, and the R-state with phosphonoacetamide plus malonate bound have been used in interpreting kinetic and mutational studies. A high-resolution structure of E. coli ATCase in the presence of PALA (a bisubstrate analog) allows a detailed description of the binding at the active site of the enzyme and allows a detailed model of the tetrahedral intermediate to be constructed. The entire regulatory chain has been traced showing that the N-terminal regions of the regulatory chains R1 and R6 are located in close proximity to each other and to the regulatory site. This portion of the molecule may be involved in the observed asymmetry between the regulatory binding sites as well as in the heterotropic response of the enzyme []. The C-terminal domain of the regulatory chains have a rubredoxin-like zinc-bound fold. ATCase from Enterobacter agglomerans (Erwinia herbicola) (Pantoea agglomerans) differs from the other investigated enterobacterial ATCases by its absence of homotropic co-operativity toward the substrate aspartate and its lack of response to ATP which is an allosteric effector (activator) of this family of enzymes. Nevertheless, the E. herbicola ATCase has the same quaternary structure, two trimers of catalytic chains with three dimers of regulatory chains, (c3)2(r2)3, as other enterobacterial ATCases and shows extensive primary structure conservation []. ; PDB: 2BE9_B 1PG5_B 1SKU_D 1Q95_L 8ATC_B 3AT1_D 1RAI_D 4E2F_D 1NBE_B 6AT1_B ....
Probab=22.20 E-value=40 Score=21.26 Aligned_cols=13 Identities=15% Similarity=0.381 Sum_probs=8.7
Q ss_pred eecCCeEEeCCCCC
Q 032813 120 KRKKVWVRFDPLFF 133 (133)
Q Consensus 120 GR~dd~Iki~~~~~ 133 (133)
|| ||+|||.+.|+
T Consensus 51 G~-KDIIKIe~~~l 63 (96)
T PF01948_consen 51 GK-KDIIKIEGRFL 63 (96)
T ss_dssp EE-EEEEEEETC--
T ss_pred Cc-CCEEEECCccC
Confidence 55 78999887653
No 150
>PF10102 DUF2341: Domain of unknown function (DUF2341); InterPro: IPR018765 This domain of unknown function is found in various bacterial proteins, including MotA/TolQ/ExbB proton channels and other transport proteins.
Probab=22.05 E-value=1.5e+02 Score=18.11 Aligned_cols=30 Identities=27% Similarity=0.523 Sum_probs=20.5
Q ss_pred CcEEEEEcCCCCccCC--------CCCCeEEEEEcCccc
Q 032813 32 NAELKVIDPEIGASLP--------HNQPGEICIRGPQIM 62 (133)
Q Consensus 32 ~~~v~i~d~~~g~~~~--------~g~~Gel~i~gp~~~ 62 (133)
+..||+++ +++.++| ..+...||||-|.+.
T Consensus 3 g~DIRf~d-~~~~~L~ywIE~wd~~~~~A~iWVkvp~i~ 40 (89)
T PF10102_consen 3 GSDIRFYD-SDGTPLPYWIESWDPTNEQALIWVKVPSIP 40 (89)
T ss_pred CccEEEEe-CCCCEeEEEEEECCCCCCeEEEEEECCCCC
Confidence 45677777 5676664 345688999988654
No 151
>PF13953 PapC_C: PapC C-terminal domain; PDB: 3L48_E 2XET_A 3RFZ_E 2KT6_A.
Probab=21.06 E-value=66 Score=18.40 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=8.8
Q ss_pred CCCCCeEEEEEcCc
Q 032813 47 PHNQPGEICIRGPQ 60 (133)
Q Consensus 47 ~~g~~Gel~i~gp~ 60 (133)
-.|+-|++++++..
T Consensus 27 ~Vg~~G~vyl~~~~ 40 (68)
T PF13953_consen 27 IVGQDGQVYLSGLP 40 (68)
T ss_dssp EB-GCGEEEEEEE-
T ss_pred EEcCCCEEEEECCC
Confidence 34666889988754
No 152
>PF13620 CarboxypepD_reg: Carboxypeptidase regulatory-like domain; PDB: 3MN8_D 3P0D_I 3KCP_A 2B59_B 1UWY_A 1H8L_A 1QMU_A 2NSM_A.
Probab=20.16 E-value=99 Score=17.72 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=17.9
Q ss_pred cccCCCCcEEEEEcCCCCc--cCCCCCCeEEEEE
Q 032813 26 CGTVVRNAELKVIDPEIGA--SLPHNQPGEICIR 57 (133)
Q Consensus 26 vG~p~p~~~v~i~d~~~g~--~~~~g~~Gel~i~ 57 (133)
-|.|++++.|.+.+.+.+. .+..+..|+-.+.
T Consensus 10 ~g~pv~~a~V~l~~~~~~~~~~~~Td~~G~f~~~ 43 (82)
T PF13620_consen 10 TGQPVPGATVTLTDQDGGTVYTTTTDSDGRFSFE 43 (82)
T ss_dssp TSCBHTT-EEEET--TTTECCEEE--TTSEEEEE
T ss_pred CCCCcCCEEEEEEEeeCCCEEEEEECCCceEEEE
Confidence 6899999999999743222 1223456776666
Done!