Query 032813
Match_columns 133
No_of_seqs 285 out of 2202
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 09:52:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032813.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032813hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ni2_A 4-coumarate:COA ligase; 99.9 4.4E-27 1.5E-31 185.8 10.3 111 1-132 332-443 (536)
2 4fuq_A Malonyl COA synthetase; 99.9 1.1E-26 3.8E-31 182.4 8.3 106 1-132 302-408 (503)
3 4gr5_A Non-ribosomal peptide s 99.9 1.9E-26 6.5E-31 183.4 7.1 117 1-132 361-478 (570)
4 3rix_A Luciferase, luciferin 4 99.9 3.5E-26 1.2E-30 181.1 7.9 106 1-132 342-448 (550)
5 1amu_A GRSA, gramicidin synthe 99.9 8.6E-26 2.9E-30 179.7 8.2 114 1-132 325-439 (563)
6 2d1s_A Luciferase, luciferin 4 99.9 1.2E-25 4.3E-30 178.1 9.1 106 1-132 344-450 (548)
7 3tsy_A Fusion protein 4-coumar 99.9 2.1E-25 7.2E-30 186.7 9.8 111 1-132 379-490 (979)
8 3etc_A AMP-binding protein; ad 99.9 2.5E-25 8.5E-30 177.7 9.8 104 1-132 375-484 (580)
9 3g7s_A Long-chain-fatty-acid-- 99.9 8.1E-26 2.8E-30 179.0 5.1 109 1-132 337-448 (549)
10 3l8c_A D-alanine--poly(phospho 99.9 4.5E-26 1.5E-30 179.1 3.3 113 1-132 299-412 (521)
11 4dg8_A PA1221; ANL superfamily 99.9 2.5E-25 8.4E-30 179.1 7.0 116 1-132 311-428 (620)
12 3nyq_A Malonyl-COA ligase; A/B 99.9 8.2E-25 2.8E-29 172.0 7.7 105 1-132 306-415 (505)
13 1mdb_A 2,3-dihydroxybenzoate-A 99.9 4.7E-25 1.6E-29 174.4 6.0 89 22-132 349-439 (539)
14 2v7b_A Benzoate-coenzyme A lig 99.9 1.5E-24 5E-29 170.9 8.7 104 1-132 334-438 (529)
15 3o83_A Peptide arylation enzym 99.9 4.4E-25 1.5E-29 174.7 5.5 106 1-132 341-448 (544)
16 3c5e_A Acyl-coenzyme A synthet 99.9 1.1E-24 3.7E-29 173.6 7.5 104 1-132 356-465 (570)
17 3ite_A SIDN siderophore synthe 99.9 5.5E-25 1.9E-29 174.4 5.4 108 1-132 328-436 (562)
18 1pg4_A Acetyl-COA synthetase; 99.9 3.4E-24 1.2E-28 173.1 9.9 109 1-132 415-526 (652)
19 3ivr_A Putative long-chain-fat 99.9 1.4E-24 4.6E-29 170.4 7.2 103 1-132 304-409 (509)
20 3e7w_A D-alanine--poly(phospho 99.9 1.3E-24 4.4E-29 170.7 6.9 112 1-132 295-407 (511)
21 2vsq_A Surfactin synthetase su 99.9 3.1E-24 1.1E-28 184.0 9.4 115 1-132 755-870 (1304)
22 1v25_A Long-chain-fatty-acid-C 99.9 1.8E-24 6.3E-29 171.1 6.6 110 1-132 326-444 (541)
23 3r44_A Fatty acyl COA syntheta 99.9 1.3E-24 4.4E-29 171.2 5.5 105 1-132 317-422 (517)
24 3fce_A D-alanine--poly(phospho 99.9 1.5E-24 5.3E-29 170.2 4.6 112 1-132 296-408 (512)
25 3rg2_A Enterobactin synthase c 99.9 2E-24 6.9E-29 173.2 5.4 88 23-132 354-443 (617)
26 3kxw_A Saframycin MX1 syntheta 99.9 3.3E-24 1.1E-28 170.4 5.0 95 22-132 372-467 (590)
27 3gqw_A Fatty acid AMP ligase; 99.9 1.3E-23 4.5E-28 166.3 7.3 84 25-132 386-470 (576)
28 1ry2_A Acetyl-coenzyme A synth 99.9 1.9E-23 6.3E-28 169.2 7.7 111 1-132 421-535 (663)
29 1t5h_X 4-chlorobenzoyl COA lig 99.9 3.3E-23 1.1E-27 162.5 8.1 89 21-132 318-411 (504)
30 3t5a_A Long-chain-fatty-acid-- 99.9 4.2E-22 1.4E-26 154.6 6.3 85 22-121 392-480 (480)
31 3ipl_A 2-succinylbenzoate--COA 99.8 1.9E-22 6.5E-27 157.8 2.5 100 1-132 307-407 (501)
32 3qov_A Phenylacetate-coenzyme 99.6 1.4E-15 4.8E-20 117.1 5.7 74 25-132 257-340 (436)
33 2y27_A Phenylacetate-coenzyme 99.5 5.2E-15 1.8E-19 114.0 3.6 73 26-132 263-342 (437)
34 2y4o_A Phenylacetate-coenzyme 99.5 1.1E-14 3.6E-19 112.4 3.9 73 26-132 265-344 (443)
35 4gs5_A Acyl-COA synthetase (AM 99.5 7.7E-14 2.6E-18 105.5 6.3 79 1-132 181-259 (358)
36 3hgu_A EHPF; phenazine, antibi 98.8 6.7E-10 2.3E-14 83.6 0.4 35 25-59 281-321 (369)
37 4eql_A 4-substituted benzoates 94.2 0.047 1.6E-06 43.8 4.2 49 45-131 380-433 (581)
38 4b2g_A GH3-1 auxin conjugating 93.9 0.049 1.7E-06 43.9 3.9 50 44-131 391-445 (609)
39 4epl_A Jasmonic acid-amido syn 92.3 0.1 3.5E-06 41.9 3.5 50 44-131 386-440 (581)
40 1smp_I Erwinia chrysanthemi in 42.7 20 0.00069 21.9 2.7 26 90-124 55-83 (101)
41 1vc3_B L-aspartate-alpha-decar 41.9 23 0.00077 21.5 2.8 31 30-60 15-51 (96)
42 3oug_A Aspartate 1-decarboxyla 36.1 33 0.0011 21.4 2.9 32 29-60 41-78 (114)
43 1jiw_I Proteinase inhibitor; p 33.1 27 0.00093 21.5 2.2 26 90-124 58-86 (106)
44 1uhe_A Aspartate 1-decarboxyla 30.7 40 0.0014 20.4 2.6 31 30-60 14-49 (97)
45 2c45_A Aspartate 1-decarboxyla 30.7 42 0.0014 21.7 2.8 32 29-60 38-75 (139)
46 1pqh_A Aspartate 1-decarboxyla 27.8 34 0.0011 22.2 2.0 32 29-60 55-92 (143)
47 3plx_B Aspartate 1-decarboxyla 26.0 43 0.0015 20.5 2.2 31 30-60 15-50 (102)
No 1
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=99.94 E-value=4.4e-27 Score=185.80 Aligned_cols=111 Identities=51% Similarity=0.847 Sum_probs=96.5
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++............+.+++|+|+++++++|+|++++++++.|+.|||+|+||+++.|| |++|+.|++.|
T Consensus 332 ~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY----~~~p~~t~~~~ 407 (536)
T 3ni2_A 332 MTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGASLPRNQPGEICIRGDQIMKGY----LNDPEATSRTI 407 (536)
T ss_dssp CGGGSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEE----TTCHHHHHHHB
T ss_pred ccccchhhhcccccCCccccCCCCCeeEeCCCcEEEEEeCCCCcCCCCCCccEEEEeCcccchhh----cCChhHHHhhc
Confidence 69998765544222223334567899999999999999988899999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. .+|||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 408 ~--------~~g~~~T---------GDl~~~~~dG~l~~~GR~dd~ik~~G~~ 443 (536)
T 3ni2_A 408 D--------KEGWLHT---------GDIGYIDDDDELFIVDRLKELIKYKGFQ 443 (536)
T ss_dssp C--------TTSCEEE---------EEEEEECTTSCEEEEEECSCCEEETTEE
T ss_pred c--------CCCceEc---------ccEEEEcCCceEEEEecccceEEECCEE
Confidence 5 5799999 999999999999 999999999999864
No 2
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=99.93 E-value=1.1e-26 Score=182.41 Aligned_cols=106 Identities=25% Similarity=0.314 Sum_probs=93.6
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++.. .......+++|+|+|+++++|+|+++++++++|++|||+|+||+++.|| |++|+.|+++|
T Consensus 302 ~TE~~~~~~~~-----~~~~~~~~~~G~p~~~~~~~i~d~~~g~~~~~g~~GEl~v~g~~v~~GY----~~~~~~t~~~f 372 (503)
T 4fuq_A 302 MTETNMNTSNP-----YDGDRVPGAVGPALPGVSARVTDPETGKELPRGDIGMIEVKGPNVFKGY----WRMPEKTKSEF 372 (503)
T ss_dssp ETTTEECBCCC-----SSSCCCTTEEEEBCTTCEEEEECTTTCCBCCTTCCEEEEEESTTSCCCB----TTCHHHHHHTB
T ss_pred ccccCcccccC-----CCCCCcCCccccCCCCeEEEEEECCCCCCCcCCCceEEEEECCchhhhh----cCChhhhHhhh
Confidence 58987654321 1234567899999999999999988899999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. .+|||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 373 ~--------~~g~~~T---------GDl~~~~~dG~l~~~GR~dd~ik~~G~~ 408 (503)
T 4fuq_A 373 R--------DDGFFIT---------GDLGKIDERGYVHILGRGKDLVITGGFN 408 (503)
T ss_dssp C--------TTSCEEE---------EEEEEECTTCEEEECCSSTTCEEETTEE
T ss_pred C--------CCCCeEc---------ceeEEEcCCCcEEEEecCCCEEEECCEE
Confidence 6 5799999 999999999999 999999999999864
No 3
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=99.93 E-value=1.9e-26 Score=183.43 Aligned_cols=117 Identities=14% Similarity=0.030 Sum_probs=85.2
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++..... .........++|+|+++++++|+| ++++++++|++|||+|+||+++.|| |++|+.|+++|
T Consensus 361 ~TE~~~~~~~~~~~-~~~~~~~~~~iG~p~~~~~v~i~d-~~~~~~~~G~~GEl~v~g~~v~~GY----~~~~~~t~~~f 434 (570)
T 4gr5_A 361 PAESMGFTTHHAVV-AGDLSGTALPIGVPLAGKRAYVLD-DDLKPAANGALGELYVAGAGLAHGY----VSRPALTAERF 434 (570)
T ss_dssp CGGGCSCSEEEECC-GGGTTSSSCCCBEECTTEEEEEEC-TTSCBCCTTCEEEEEEEETTCCCEE----TTCHHHHHHHE
T ss_pred hhhheeeeeeeeec-ccccCCCccccceeeCCCEEEEEC-CCCCCCCCCCcEEEEEeecccchhc----CCCchhhhccc
Confidence 68988765544321 112234456899999999999999 6799999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
..+.......++||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 435 ~~~~~~~~~~~~w~~T---------GDlg~~d~dG~l~~~GR~~d~Ik~~G~~ 478 (570)
T 4gr5_A 435 VADPFAGPGGERMYRT---------GDLARRRADGVLEYVGRADDQVKIRGFR 478 (570)
T ss_dssp EECTTCCSSCCEEEEE---------EEEEEECTTSCEEEEEC-----------
T ss_pred ccCCCCCCCCCEEEeC---------CCeEEECCCCeEEEEcccCCEEEECcEE
Confidence 6432211123479999 999999999999 999999999999875
No 4
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=99.93 E-value=3.5e-26 Score=181.11 Aligned_cols=106 Identities=28% Similarity=0.410 Sum_probs=83.0
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++.... ...+.+++|+|+|+++++|+|+++++++++|+.|||+|+||+++.|| |++|+.|++.|
T Consensus 342 ~TE~~~~~~~~~~-----~~~~~~~vG~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY----~~~~~~t~~~~ 412 (550)
T 3rix_A 342 LTETTSAILITPE-----GDDKPGAVGKVVPFFEAKVVDLDTGKTLGVNQRGELCVRGPMIMSGY----VNNPEATNALI 412 (550)
T ss_dssp CGGGSSEEEECCT-----TCCCTTEEEEECTTCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEE----TTCHHHHHHHB
T ss_pred cCccccceecCCC-----CCCCCCCcccccCCcEEEEEeCCCCcCCCCCCCeEEEEeCCCcchhh----cCChhhhhhhc
Confidence 6999876665431 23567899999999999999987899999999999999999999999 99999999998
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. .+|||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 413 ~--------~~g~~~T---------GDl~~~~~dG~l~~~GR~dd~ik~~G~~ 448 (550)
T 3rix_A 413 D--------KDGWLHS---------GDIAYWDEDEHFFIVDRLKSLIKYKGYQ 448 (550)
T ss_dssp C--------TTSCEEE---------EEEEEECTTCCEEEC-------------
T ss_pred C--------CCCCeec---------CcEEEEeCCceEEEEecchheeEECCEE
Confidence 5 5799999 999999999999 999999999999864
No 5
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=99.92 E-value=8.6e-26 Score=179.74 Aligned_cols=114 Identities=17% Similarity=0.115 Sum_probs=93.8
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++..... .....+..++|+|+|+++++|+| +++++++.|+.|||+|+||+++.|| |++|+.|+++|
T Consensus 325 ~TE~~~~~~~~~~~--~~~~~~~~~vG~p~~~~~v~i~d-~~~~~~~~g~~GEl~v~g~~v~~GY----~~~pe~t~~~f 397 (563)
T 1amu_A 325 PTETTICATTWVAT--KETIGHSVPIGAPIQNTQIYIVD-ENLQLKSVGEAGELCIGGEGLARGY----WKRPELTSQKF 397 (563)
T ss_dssp CGGGSSCSEEEECC--SSCCCSSCCCBEECTTEEEEEEC-TTSCBCCTTCEEEEEEEETTCCCEE----TTCHHHHHHHE
T ss_pred cCHHhHhheeeecc--cccCCCCCcccceeCCCEEEEEC-CCcCCCCCCCcEEEEEechhhChhh----CCCchhhhhhc
Confidence 69998665554321 11123567899999999999999 6799999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
..++. ...++||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 398 ~~~~~--~~g~~w~~T---------GDlg~~d~dG~l~i~GR~~d~Ik~~G~~ 439 (563)
T 1amu_A 398 VDNPF--VPGEKLYKT---------GDQARWLSDGNIEYLGRIDNQVKIRGHR 439 (563)
T ss_dssp EECSS--STTSEEEEE---------EEEEEECTTSCEEEEEEGGGEEEETTEE
T ss_pred ccCCC--CCCCEEEec---------CCEEEEcCCCeEEEeccccCEEEECCEE
Confidence 63211 113469999 999999999999 999999999999864
No 6
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=99.92 E-value=1.2e-25 Score=178.12 Aligned_cols=106 Identities=26% Similarity=0.396 Sum_probs=94.0
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++... ....+.+++|+|+|+++++|+|+++++++++|+.|||+|+||+++.|| |++|+.|++.|
T Consensus 344 ~TE~~~~~~~~~-----~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY----~~~~~~t~~~f 414 (548)
T 2d1s_A 344 LTETTSAIIITP-----EGDDKPGASGKVVPLFKAKVIDLDTKKSLGPNRRGEVCVKGPMLMKGY----VNNPEATKELI 414 (548)
T ss_dssp CGGGSSEEEECC-----TTCCCTTCCBEECTTCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEE----TTCHHHHHHHB
T ss_pred cccccceeeecC-----cccCCCCCCCccCCCceEEEEeCCcCccCCCCCCeEEEECCHHHhhhh----cCChHHhhhcc
Confidence 689987655532 113567899999999999999977899999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. .+|||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 415 ~--------~~g~~~T---------GDl~~~~~dG~l~~~GR~~d~ik~~G~~ 450 (548)
T 2d1s_A 415 D--------EEGWLHT---------GDIGYYDEEKHFFIVDRLKSLIKYKGYQ 450 (548)
T ss_dssp C--------TTSCEEE---------EEEEEECTTCCEEEEEEGGGCBCBTTCC
T ss_pred c--------CCcEEEc---------cCEEEEcCCCeEEEeccccceEEECCEE
Confidence 5 5799999 999999999999 999999999999875
No 7
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.92 E-value=2.1e-25 Score=186.67 Aligned_cols=111 Identities=51% Similarity=0.843 Sum_probs=89.7
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++............+.+++|+|+++++++|+|+++++++++|++|||+|+||++++|| |++|+.|++.|
T Consensus 379 ~TE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~GEl~i~g~~v~~GY----~~~p~~t~~~f 454 (979)
T 3tsy_A 379 MTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKIVDPDTGDSLSRNQPGEICIRGHQIMKGY----LNNPAATAETI 454 (979)
T ss_dssp CGGGCSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTSCCBCCTTCCEEEEEESTTSCSEE----TTCHHHHHHHB
T ss_pred hhhhhHHHHhCCCCCCCccccCCCCcCcccCCcEEEEEeCCCCCCCCCCCccEEEEECCCccccc----cCChhhhhhhc
Confidence 69998765554222223334567899999999999999988899999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. .++||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 455 ~--------~~g~~~T---------GDl~~~~~dG~l~~~GR~dd~ik~~G~~ 490 (979)
T 3tsy_A 455 D--------KDGWLHT---------GDIGLIDDDDELFIVDRLKELIKYKGFQ 490 (979)
T ss_dssp C--------TTSCEEE---------EEEEEECTTSCEEEEEESCC--------
T ss_pred c--------CCCcEEc---------CCEEEEcCCceEEEecCCCCEEEECCEE
Confidence 6 5799999 999999999999 999999999999864
No 8
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=99.92 E-value=2.5e-25 Score=177.71 Aligned_cols=104 Identities=20% Similarity=0.186 Sum_probs=91.9
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEc-----CccccccccccCCCchh
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRG-----PQIMKVAELEFWSDGGH 75 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~g-----p~~~~GY~~~~~~~~~~ 75 (133)
+||++..++.... ...+.+++|+|+|+++++|+| ++++++++|+.|||+|++ +.++.|| |++|+.
T Consensus 375 ~TE~~~~~~~~~~-----~~~~~~~~G~p~~~~~v~ivd-~~g~~~~~g~~GEl~v~~~~g~~~~~~~gY----~~~p~~ 444 (580)
T 3etc_A 375 QTETVVTIATFPW-----MEPKPGSIGKPTPGYKIELMD-RDGRLCEVGEEGEIVINTMEGKPVGLFVHY----GKDPER 444 (580)
T ss_dssp CTTSSCCEECCTT-----SCCCTTCCBEECTTCEEEEEC-TTSCBCCTTCCEEEEEECTTCCCTTCCCEE----TTCHHH
T ss_pred cccccceeecCCC-----CCCCCCccccCCCCCEEEEEC-CCCCCCCCCCceEEEEecCCCCCCeeeccc----cCCHhH
Confidence 6999766554321 235678999999999999999 579999999999999997 7899999 999999
Q ss_pred hHHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 76 DEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 76 t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
|++.| .+|||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 445 t~~~f---------~~gwy~T---------GDlg~~d~dG~l~~~GR~dd~Ik~~G~~ 484 (580)
T 3etc_A 445 TEETW---------HDGYYHT---------GDMAWMDEDGYLWFVGRADDIIKTSGYK 484 (580)
T ss_dssp HHHHE---------ETTEEEE---------EEEEEECTTSCEEEEEESSSCEEETTEE
T ss_pred HHhhc---------CCCEEec---------CcEEEECCCCcEEEEecCCCEEEECCEE
Confidence 99999 4799999 999999999999 999999999999864
No 9
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=99.92 E-value=8.1e-26 Score=179.02 Aligned_cols=109 Identities=29% Similarity=0.419 Sum_probs=84.6
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++..... ......++|+|+++++++|+|++++++++.|+.|||+|+||+++.|| |++|+.|+++|
T Consensus 337 ~TE~~~~~~~~~~~----~~~~~~~~G~p~~~~~~~i~d~~~g~~~~~g~~GEl~v~g~~v~~GY----~~~~~~t~~~f 408 (549)
T 3g7s_A 337 MTEACPMVTTNPPL----RLDKSTTQGVPMSDIELKVISLEDGRELGVGESGEIVIRGPNIFKGY----WKREKENQECW 408 (549)
T ss_dssp CGGGSSEEEECCGG----GGGGTTSCCEECTTCEEEEECSSSCCEECTTCCEEEEEESTTSCSEE----TTCTTGGGTSE
T ss_pred ccccchhhhcCCcc----ccCcCCCccccCCCCEEEEEeCCCCcCCCCCCceEEEEECcchhhhh----CCChhhhhhhh
Confidence 68998766654321 12456799999999999999987899999999999999999999999 99999999988
Q ss_pred hhhhcccCCCCc--ccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLG--WASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~g--w~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
..+ .+| ||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 409 ~~~------~~g~~~~~T---------GDl~~~~~dG~l~~~GR~dd~ik~~G~~ 448 (549)
T 3g7s_A 409 WYD------EKGRKFFRT---------GDVGFIDEEGFLHFQDRVKEVIKYKGYT 448 (549)
T ss_dssp EEC------TTCCEEEEE---------EEEEEECTTSCEEEEEEC----------
T ss_pred hcc------CCCCceEcc---------CcEEEEcCCceEEEeccccceEEECCEE
Confidence 421 235 9999 999999999999 999999999999864
No 10
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=99.92 E-value=4.5e-26 Score=179.11 Aligned_cols=113 Identities=19% Similarity=0.082 Sum_probs=88.8
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++...............++|+|+|+++++|+| ++++++++|+.|||+|+||+++.|| |++|+.|+++|
T Consensus 299 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d-~~g~~~~~g~~GEl~v~g~~v~~GY----~~~~~~t~~~f 373 (521)
T 3l8c_A 299 PTEATVALSAIEITREMVDNYTRLPIGYPKPDSPTYIID-EDGKELSSGEQGEIIVTGPAVSKGY----LNNPEKTAEAF 373 (521)
T ss_dssp CGGGSSCSEEEEECHHHHHHCSSCEEEEECTTSCEEEEC-TTSCBCCTTCCEEEEEESTTSCSCB----TTCHHHHHHHE
T ss_pred ccHHhhhhceeecccccccCCCccccccccCCCEEEEEC-CCcCCCCCCCceEEEecccccChhh----cCCchHhhccC
Confidence 689887655432110000123456899999999999999 6799999999999999999999999 99999999998
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
... ..++||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 374 ~~~-----~~~~~~~T---------GDlg~~d~dG~l~~~GR~~d~i~~~G~~ 412 (521)
T 3l8c_A 374 FTF-----KGQPAYHT---------GDIGSLTEDNILLYGGRLDFQIKYAGYR 412 (521)
T ss_dssp EEE-----TTEEEEEE---------EEEEEECSSSCEEEEEEGGGBCC-----
T ss_pred cCC-----CCceeeeC---------CCEEEEeCCCeEEEeCcccceEeECCEE
Confidence 411 14589999 999999999999 999999999999865
No 11
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=99.91 E-value=2.5e-25 Score=179.12 Aligned_cols=116 Identities=16% Similarity=0.096 Sum_probs=92.5
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCcc-CCCCCCeEEEEEcCccccccccccCCCchhhHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGAS-LPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEI 79 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~-~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~ 79 (133)
+||++..++..... .........++|+|+++++++|+| +++++ ++.|++|||+|+||++++|| |++|+.|+++
T Consensus 311 ~TE~~~~~~~~~~~-~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~~~~g~~GEl~i~G~~v~~GY----~~~p~~t~~~ 384 (620)
T 4dg8_A 311 PTENTTFTCCHVVT-DDDLEEDDIPIGKAIAGTAVLLLD-EHGQEIAEPDRAGEIVAFGAGLAQGY----RNDAARTRAS 384 (620)
T ss_dssp CGGGCSCSEEEECC-TGGGGSSSCCCBEECTTEEEEEEC-TTSCBCCSSSCCEEEEEEETTCCSEE----TTCHHHHHHH
T ss_pred hhhhhhheEEEecc-ccccCCCCCCceecccCcEEEEEC-ccCCCCCCCCCceEEEEecccccccc----CCChhhhhhh
Confidence 69998766544321 112234567999999999999999 45666 89999999999999999999 9999999999
Q ss_pred HhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 80 IKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 80 f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
|..++. .+...+||+| ||+|++++||+| |+||+|||||++|..
T Consensus 385 f~~~p~-~~~~~~~yrT---------GDl~~~~~dG~l~~~GR~dd~Ik~~G~r 428 (620)
T 4dg8_A 385 FVELPY-RGRLLRAYRT---------GDRARYDEQGRLRFIGRGDGQVKLNGYR 428 (620)
T ss_dssp EEEEEE-TTEEEEEEEE---------EEEEEECTTSCEEEEECSSSEEEETTEE
T ss_pred hccCCC-CCCCceEEeC---------CCEEEECCCCeEEEEccCCCEEEECCEE
Confidence 974321 1111168888 999999999999 999999999999864
No 12
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=99.91 E-value=8.2e-25 Score=171.96 Aligned_cols=105 Identities=23% Similarity=0.324 Sum_probs=86.9
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCC---CCCeEEEEEcCccccccccccCCCchhhH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPH---NQPGEICIRGPQIMKVAELEFWSDGGHDE 77 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~---g~~Gel~i~gp~~~~GY~~~~~~~~~~t~ 77 (133)
+||++..++... .......++|+|+++++++|+| +++++++. |++|||+|+||+++.|| |++|+.|+
T Consensus 306 ~TE~~~~~~~~~-----~~~~~~~~vG~p~~~~~~~i~d-~~g~~~~~~~~g~~GEl~v~g~~v~~GY----~~~~~~t~ 375 (505)
T 3nyq_A 306 MTETLMNTSVRA-----DGEPRAGTVGVPLPGVELRLVE-EDGTPIAALDGESVGEIQVRGPNLFTEY----LNRPDATA 375 (505)
T ss_dssp ETTTEEEEECCT-----TSCCCTTCCCEECTTCEEEEC------CCCCCCSCCCEEEEEESTTSCCEE----TTCHHHHH
T ss_pred hhhcccccccCC-----CCCCCCCCcccCCCCCEEEEEC-CCCCCcccCCCCceEEEEEecCchhhhh----CCChhHhh
Confidence 589876554432 2235668999999999999999 67888876 89999999999999999 99999999
Q ss_pred HHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeec-CCeEEeCCCC
Q 032813 78 EIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRK-KVWVRFDPLF 132 (133)
Q Consensus 78 ~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~-dd~Iki~~~~ 132 (133)
++|. .++||+| ||+|++|+||+| |+||+ |||||++|.+
T Consensus 376 ~~f~--------~~g~y~T---------GDl~~~~~dG~l~~~GR~~d~~ik~~G~~ 415 (505)
T 3nyq_A 376 AAFT--------EDGFFRT---------GDMAVRDPDGYVRIVGRKATDLIKSGGYK 415 (505)
T ss_dssp HTBC--------TTSCEEE---------EEEEEECTTSCEEEEEESSCCCEEETTEE
T ss_pred hhhc--------CCCCCcc---------CCeEEECCCccEEEeCCccCceEEeCCEE
Confidence 9996 5799999 999999999999 99998 5999999864
No 13
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=99.91 E-value=4.7e-25 Score=174.41 Aligned_cols=89 Identities=19% Similarity=0.248 Sum_probs=82.2
Q ss_pred CCCccccCCCC-cEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCC
Q 032813 22 KSGSCGTVVRN-AELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAE 100 (133)
Q Consensus 22 ~~~~vG~p~p~-~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~ 100 (133)
...++|+|+++ .+++|+| ++++++++|+.|||+|+||++++|| |++|+.|+++|. .+|||+|
T Consensus 349 ~~~~~G~p~~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~v~~GY----~~~~~~t~~~f~--------~~g~~~T---- 411 (539)
T 1mdb_A 349 IVNTQGKPMSPYDESRVWD-DHDRDVKPGETGHLLTRGPYTIRGY----YKAEEHNAASFT--------EDGFYRT---- 411 (539)
T ss_dssp HHHCCCEESSTTCEEEEEC-TTSCBCCTTCCEEEEEECTTSCSSC----TTCHHHHHHHBC--------TTSCEEE----
T ss_pred cCCCCCcccCCCceEEEEC-CCCCCCcCCCcceEEeeCcccchhh----cCChhhhhhhcc--------CCCCeec----
Confidence 34689999976 4899999 6799999999999999999999999 999999999996 5799999
Q ss_pred CCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 101 PGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 101 ~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||+|++|+||+| |+||+|||||++|.+
T Consensus 412 -----GDlg~~~~dG~l~~~GR~dd~ik~~G~~ 439 (539)
T 1mdb_A 412 -----GDIVRLTRDGYIVVEGRAKDQINRGGEK 439 (539)
T ss_dssp -----EEEEEECTTSCEEEEEEGGGCEECSSCE
T ss_pred -----CceEEECCCCcEEEeccccceEEECCEE
Confidence 999999999999 999999999999864
No 14
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=99.91 E-value=1.5e-24 Score=170.92 Aligned_cols=104 Identities=19% Similarity=0.303 Sum_probs=88.0
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++.... .....+++|+|+++++++|+| ++++++++|++|||+|+||+++.|| |++|+.|++.|
T Consensus 334 ~TE~~~~~~~~~~-----~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~g~~GEl~v~g~~~~~gY----~~~~~~t~~~f 403 (529)
T 2v7b_A 334 STEMLHIFLSNRA-----GAVEYGTTGRPVPGYEIELRD-EAGHAVPDGEVGDLYIKGPSAAVMY----WNNREKSRATF 403 (529)
T ss_dssp CTTTSSEEEECCT-----TCCCTTSCCEECTTCEEEEEC-TTSCBCCTTSCEEEEEECTTCCCCB----TTCHHHHHHHE
T ss_pred hhhcCceeecccc-----CCCccCCcccCCCCCEEEEEC-CCCCCCCCCCccEEEEecCCccccc----CCChHHHHHhh
Confidence 6898655444321 124568999999999999999 6799999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. ++||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 404 ~---------~~~~~T---------GDl~~~~~~G~l~~~GR~dd~ik~~G~~ 438 (529)
T 2v7b_A 404 L---------GEWIRS---------GDKYCRLPNGCYVYAGRSDDMLKVSGQY 438 (529)
T ss_dssp E---------TTEEEE---------EEEEEECTTSCEEEEEEGGGCBC----C
T ss_pred h---------cCCccc---------CceEEECCCccEEEeCccCCeEEECCEE
Confidence 4 689999 999999999999 999999999999865
No 15
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=99.91 E-value=4.4e-25 Score=174.72 Aligned_cols=106 Identities=19% Similarity=0.172 Sum_probs=82.4
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCC-CCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVV-RNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEI 79 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~-p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~ 79 (133)
+||++..++... ........++|+|+ ++++++|+| ++++++++|++|||+|+||+++.|| |++|+.|+++
T Consensus 341 ~TE~~~~~~~~~----~~~~~~~~~~G~p~~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~v~~GY----~~~~~~t~~~ 411 (544)
T 3o83_A 341 MAEGLVNYTRLD----DSDEQIFTTQGRPISSDDEIKIVD-EQYREVPEGEIGMLATRGPYTFCGY----YQSPEHNSQV 411 (544)
T ss_dssp CTTSCEEECCTT----SCHHHHHHCCCEESCTTCEEEEEC-TTSCBCCTTCCEEEEEECTTSCSCC----TTCHHHHHHH
T ss_pred cccccceeecCC----CchhhccCCCceecCCCcEEEEEC-CCCCCCCCCCeeEEEEecCCcchhh----cCChhhhhhh
Confidence 689875433221 11122346899996 899999999 7899999999999999999999999 9999999999
Q ss_pred HhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 80 IKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 80 f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
|. .++||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 412 f~--------~~g~~~T---------GDlg~~~~dG~l~~~GR~dd~ik~~G~~ 448 (544)
T 3o83_A 412 FD--------EDNYYYS---------GDLVQRTPDGNLRVVGRIKDQINRGGEK 448 (544)
T ss_dssp BC--------TTCCEEE---------EEEEEECTTSCEEEEEEEC---------
T ss_pred CC--------CCCCeEc---------CCEEEEcCCCCEEEEeecCCEEEeCCEE
Confidence 96 5799999 999999999999 999999999999865
No 16
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=99.91 E-value=1.1e-24 Score=173.63 Aligned_cols=104 Identities=21% Similarity=0.236 Sum_probs=91.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEE-----cCccccccccccCCCchh
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIR-----GPQIMKVAELEFWSDGGH 75 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~-----gp~~~~GY~~~~~~~~~~ 75 (133)
+||++..++... ....+.+++|+|+|+++++|+| +++++++.|+.|||+|+ ||+++.|| |++|+.
T Consensus 356 ~TE~~~~~~~~~-----~~~~~~~~vG~p~~~~~v~i~d-~~g~~~~~G~~GEl~v~~~~~~g~~v~~GY----~~~~~~ 425 (570)
T 3c5e_A 356 QTETGLTCMVSK-----TMKIKPGYMGTAASCYDVQIID-DKGNVLPPGTEGDIGIRVKPIRPIGIFSGY----VDNPDK 425 (570)
T ss_dssp ETTTEEEEECCT-----TSCCCTTCCCEECTTCCEEEEC-TTSCBCCTTCCEEEEEECSSBCCTTCCCEE----TTCHHH
T ss_pred hhhcccceecCc-----ccccCCCcccccCCCceEEEEC-CCCCCCCCCCCCeeEEeccCCCCchhhccc----cCChhH
Confidence 589986554432 1134568999999999999999 67999999999999999 99999999 999999
Q ss_pred hHHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 76 DEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 76 t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
|++.|. ++||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 426 t~~~f~---------~~~~~T---------GDlg~~d~dG~l~~~GR~dd~Ik~~G~~ 465 (570)
T 3c5e_A 426 TAANIR---------GDFWLL---------GDRGIKDEDGYFQFMGRADDIINSSGYR 465 (570)
T ss_dssp HHHTEE---------TTEEEE---------EEEEEECTTSCEEEEEEGGGCEEETTEE
T ss_pred hhhhhc---------CCcccc---------ceeEEEcCCceEEEEecCCCEEEECCEE
Confidence 999983 689999 999999999999 999999999999864
No 17
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=99.90 E-value=5.5e-25 Score=174.44 Aligned_cols=108 Identities=13% Similarity=-0.002 Sum_probs=81.7
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++.... .......++|+|+++++++|+|+++++++++|+.|||+|+||+++.|| |++|+.++..+
T Consensus 328 ~TE~~~~~~~~~~----~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY----~~~p~~t~~~~ 399 (562)
T 3ite_A 328 PTEVTIGCSAGRI----LPDSDTRCIGHPLGDSVAHVLAPGSNEHVKKGMAGELVIEGSLVANGY----LNRPDAKGFCD 399 (562)
T ss_dssp CGGGCSCSEEEEC----CTTSCTTEEEEECTTCEEEEECTTSSCBCCTTSCEEEEEESTTSCCEE----SSCTTCCSEEE
T ss_pred cchheeeeeeeee----cCCCCCccccccCCCCeEEEEeCCCCCCCCCCCceEEEEeccccchhh----CCCcccccccc
Confidence 6998876655432 113456789999999999999977889999999999999999999999 99999886443
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
. ..++||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 400 ~-------~g~~w~~T---------GDlg~~d~dG~l~~~GR~dd~Ik~~G~~ 436 (562)
T 3ite_A 400 I-------NGRKMYRT---------GDIVRMDADSSILFLGRKDEQVKVRGQR 436 (562)
T ss_dssp E-------TTEEEEEE---------EEEEEECTTSCEEEEEEC----------
T ss_pred C-------CCCEEEec---------CCEEEEcCCCeEEEEccccCEEeECcEE
Confidence 2 12349999 999999999999 999999999999865
No 18
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=99.90 E-value=3.4e-24 Score=173.11 Aligned_cols=109 Identities=18% Similarity=0.137 Sum_probs=92.1
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEc--CccccccccccCCCchhhHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRG--PQIMKVAELEFWSDGGHDEE 78 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~g--p~~~~GY~~~~~~~~~~t~~ 78 (133)
+||++..++.... .....+.+++|+|+++++++|+| +++++++.|+.|||+|+| |++++|| |++|+.+.+
T Consensus 415 ~TE~~~~~~~~~~---~~~~~~~~s~G~p~~g~~v~i~d-~~g~~v~~g~~GEl~i~g~~p~~~~gY----~~~~e~~~~ 486 (652)
T 1pg4_A 415 QTETGGFMITPLP---GAIELKAGSATRPFFGVQPALVD-NEGHPQEGATEGNLVITDSWPGQARTL----FGDHERFEQ 486 (652)
T ss_dssp CGGGSSCSBCCCT---TTCCBCTTCCBSBCTTCCEEEEC-TTCCBCCSSEEEEEEECSCCTTCCCEE----TTCHHHHHH
T ss_pred CcccccceecCCC---CCcCccCCccccCcCCCeEEEEC-CCCCCcCCCceEEEEEccCCCchhhhh----cCCHHHHHh
Confidence 6898866554321 12235678999999999999999 679999999999999999 7899999 999999988
Q ss_pred HHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 79 IIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 79 ~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.|... .+|||+| ||+|++|+||+| |+||+|||||++|..
T Consensus 487 ~~~~~------~~g~y~T---------GDlg~~d~dG~l~i~GR~dd~Ik~~G~r 526 (652)
T 1pg4_A 487 TYFST------FKNMYFS---------GDGARRDEDGYYWITGRVDDVLNVSGHR 526 (652)
T ss_dssp HHHSS------STTSEEE---------EEEEEECTTSCEEEEEESSSEEEETTEE
T ss_pred hhhhc------CCCEEEC---------CcEEEEcCCCcEEEEecCCCEEEECCEE
Confidence 87421 3689999 999999999999 999999999999864
No 19
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=99.90 E-value=1.4e-24 Score=170.40 Aligned_cols=103 Identities=21% Similarity=0.347 Sum_probs=81.8
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++.+++..... ....++|+|+++++++|+| ++++++++|++|||+|+||+++.|| |++|+.|+++|
T Consensus 304 ~TE~~~~~~~~~~~------~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~~~~gY----~~~~~~t~~~f 372 (509)
T 3ivr_A 304 QSETSGLSTFAPYR------DRPKSAGRPLFWRTVAVVD-AEDRPLPPGEVGEIVLRGPTVFKGY----WNNAAATQHAF 372 (509)
T ss_dssp EGGGTEEEEEEEGG------GSTTSCCEECTTCEEEEEC-TTSCBCCTTCCEEEEEESTTSCCEE----TTCHHHHHHHT
T ss_pred ccccccccccCccc------cCCCcccccCCCcEEEEEC-CCCCCCCCCCceEEEEecCCccccc----cCCHHHhHHHh
Confidence 58998766654321 2234599999999999999 5799999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeec--CCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRK--KVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~--dd~Iki~~~~ 132 (133)
. +|||+| ||+|++|+||+| |+||+ ||+||++|.+
T Consensus 373 ~---------~g~~~T---------GDl~~~~~dG~l~~~GR~d~~d~ik~~G~~ 409 (509)
T 3ivr_A 373 R---------NGWHHT---------GDMGRFDADGYLFYAGRAPEKELIKTGGEN 409 (509)
T ss_dssp G---------GGSEEE---------EEEEEECTTSCEEEEEEC------------
T ss_pred h---------cCCccc---------ccEEEECCCceEEEeCCCCcceeEEECCEE
Confidence 4 699999 999999999999 99999 9999999864
No 20
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=99.90 E-value=1.3e-24 Score=170.74 Aligned_cols=112 Identities=18% Similarity=0.144 Sum_probs=90.2
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
|||++..++...............++|+|+|+++++|+| ++++++++|+.|||+|+||+++.|| |++|+.|++.|
T Consensus 295 ~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~GEl~v~g~~v~~GY----~~~~~~t~~~f 369 (511)
T 3e7w_A 295 PTEATVAVTSVEITNDVISRSESLPVGFAKPDMNIFIMD-EEGQPLPEGEKGEIVIAGPSVSRGY----LGEPELTEKAF 369 (511)
T ss_dssp CGGGSSCSEEEEECHHHHTTCSSCCCBEECTTCEEEEEC-TTSCBCCTTCCEEEEEESTTSCCCB----TTCHHHHHHHE
T ss_pred cchheeeeeEEeccccccccCCcCCCcceeCCCEEEEEC-CCCCCCCCCCceEEEEecCccChhh----CCCcccchhhh
Confidence 689887655432111111224557899999999999999 6799999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
... ....||+| ||+|++ +||+| |+||+|||||++|.+
T Consensus 370 ~~~-----~g~~~~~T---------GDlg~~-~dG~l~~~GR~~d~ik~~G~~ 407 (511)
T 3e7w_A 370 FSH-----EGQWAYRT---------GDAGFI-QDGQIFCQGRLDFQIKLHGYR 407 (511)
T ss_dssp EES-----SSSEEEEE---------EEEEEE-ETTEEEEEEESSSEEEETTEE
T ss_pred cCC-----CCCEEEeC---------CCeEEc-cCCeEEEEccccCEEEECCEE
Confidence 521 01237999 999999 58999 999999999999864
No 21
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=99.90 E-value=3.1e-24 Score=183.98 Aligned_cols=115 Identities=20% Similarity=0.133 Sum_probs=95.1
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+|||+..++..... .........++|+|+++++++|+| ++++++|.|++|||||+|+++++|| |++|+.|+++|
T Consensus 755 ~TE~~~~~~~~~~~-~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~v~~GY----~~~p~~T~~~f 828 (1304)
T 2vsq_A 755 PTEGTVFATAHVVH-DLPDSISSLPIGKPISNASVYILN-EQSQLQPFGAVGELCISGMGVSKGY----VNRADLTKEKF 828 (1304)
T ss_dssp CGGGSSCSEEEECC-CCCSSCSSCCCBEECTTEEEEEEC-TTSCBCCTTCCEEEEEEETTCCCCB----TTCHHHHHHHE
T ss_pred hhHHhHHheeeecc-CccccCCCCCCceeeCCCEEEEEC-CCcCCCCCCCceEEEEeccccCccc----cCCcccchhhh
Confidence 69998766654321 111233457899999999999999 6799999999999999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
..++. ...++||+| ||+|++++||+| |+||+|||||++|..
T Consensus 829 ~~~p~--~~g~~~yrT---------GDl~~~~~dG~l~~~GR~d~qvki~G~r 870 (1304)
T 2vsq_A 829 IENPF--KPGETLYRT---------GDLARWLPDGTIEYAGRIDDQVKIRGHR 870 (1304)
T ss_dssp EECTT--STTCEEEEE---------EEEEEECTTSCEEEEEEGGGEEEETTEE
T ss_pred ccCCC--CCCCeeEec---------CCeEEEcCCCeEEEEcCCCCEEEECCEe
Confidence 74432 123468888 999999999999 999999999999863
No 22
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=99.90 E-value=1.8e-24 Score=171.08 Aligned_cols=110 Identities=23% Similarity=0.343 Sum_probs=90.0
Q ss_pred CCCCCcccccccCCCCC-CC-----CCCCCccccCCCCcEEEEEcCCCCccCCC--CCCeEEEEEcCccccccccccCCC
Q 032813 1 MTEAGPVLSMCLGFAKQ-PF-----PTKSGSCGTVVRNAELKVIDPEIGASLPH--NQPGEICIRGPQIMKVAELEFWSD 72 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~-~~-----~~~~~~vG~p~p~~~v~i~d~~~g~~~~~--g~~Gel~i~gp~~~~GY~~~~~~~ 72 (133)
+||++.+++........ .. .....++|+|+|+++++|+| +++++++. ++.|||+|+||+++.|| |++
T Consensus 326 ~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~~~~~~GEl~v~g~~v~~GY----~~~ 400 (541)
T 1v25_A 326 LTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPIPLVRLRVAD-EEGRPVPKDGKALGEVQLKGPWITGGY----YGN 400 (541)
T ss_dssp CGGGSSEEEECCCCGGGTTSCHHHHHHHHTSCBEECTTCEEEEEC-TTSCBCCSSSCCCEEEEEESTTSBSSC----BTC
T ss_pred ccccccceecccccccccccCccccccccCCCCCcCCCcEEEEEC-CCCCCCCCCCCcceEEEEeCcchhccc----cCC
Confidence 69998766554211000 00 01347899999999999999 57899985 36899999999999999 999
Q ss_pred chhhHHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 73 GGHDEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 73 ~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
|++|+++|. .+|||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 401 p~~t~~~f~--------~~g~~~T---------GDlg~~d~dG~l~~~GR~~d~ik~~G~~ 444 (541)
T 1v25_A 401 EEATRSALT--------PDGFFRT---------GDIAVWDEEGYVEIKDRLKDLIKSGGEW 444 (541)
T ss_dssp HHHHHTTBC--------TTSCEEE---------EEEEEECTTCCEEEEEESSCEEEETTEE
T ss_pred hhhhhhhcc--------CCCCeEc---------CCEEEEcCCceEEEeecccceeeeCCEE
Confidence 999999985 4799999 999999999999 999999999999864
No 23
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=99.90 E-value=1.3e-24 Score=171.19 Aligned_cols=105 Identities=22% Similarity=0.291 Sum_probs=91.6
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++.... .......+++|+|+++++++|+| +++++++.| .|||+|+||+++.|| |++|+.|+++|
T Consensus 317 ~TE~~~~~~~~~~---~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g-~GEl~v~g~~v~~GY----~~~p~~t~~~f 387 (517)
T 3r44_A 317 LTESCGGGTLLLS---EDALRKAGSAGRATMFTDVAVRG-DDGVIREHG-EGEVVIKSDILLKEY----WNRPEATRDAF 387 (517)
T ss_dssp CGGGTTCEEEECG---GGTTTTTTCCBEECTTEEEEEEC-TTSCEESSE-EEEEEEEETTSCSEE----TTCHHHHHHTE
T ss_pred ccccccceeecCC---ccccccCCCCCcCCCCeEEEEEC-CCCCCCCCC-CeEEEEeCcchhhhh----CCChhhhHhhh
Confidence 6898876555432 12245678999999999999999 679999999 899999999999999 99999999999
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.++||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 388 ---------~~g~~~T---------GDl~~~~~dG~l~~~GR~dd~ik~~G~~ 422 (517)
T 3r44_A 388 ---------DNGWFRT---------GDIGEIDDEGYLYIKDRLKDMIISGGEN 422 (517)
T ss_dssp ---------ETTEEEE---------EEEEEECTTSCEEEEECGGGCEEETTEE
T ss_pred ---------cCCCEec---------ceeEEEcCCeeEEEecCCcCEEEECCEE
Confidence 4799999 999999999999 999999999999864
No 24
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=99.90 E-value=1.5e-24 Score=170.18 Aligned_cols=112 Identities=18% Similarity=0.110 Sum_probs=91.5
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++...............++|+|+++++++|+| ++++++++|+.|||+|+||+++.|| |++|+.|+++|
T Consensus 296 ~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~GEl~v~g~~v~~GY----~~~~~~t~~~f 370 (512)
T 3fce_A 296 PTEATVAVTGIHVTEEVLDQYKSLPVGYCKSDCRLLIMK-EDGTIAPDGEKGEIVIVGPSVSVGY----LGSPELTEKAF 370 (512)
T ss_dssp CGGGSSCSEEEECCHHHHHHCSSCCCEEECTTCEEEEEC-SSSCBCCTTSCEEEEEESTTSCSCB----TTCHHHHHHHE
T ss_pred cChhhhheeeEEeccccccccCCCccccccCCcEEEEEC-CCCCCCCCCCeEEEEEeccccChhh----cCCchhhhhcc
Confidence 689887665432110000123567899999999999999 7899999999999999999999999 99999999998
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
... ..++||+| ||+|++ +||+| |+||+|||||++|.+
T Consensus 371 ~~~-----~~~~~~~T---------GDlg~~-~dG~l~i~GR~~d~ik~~G~~ 408 (512)
T 3fce_A 371 TMI-----DGERAYKT---------GDAGYV-ENGLLFYNGRLDFQIKLHGYR 408 (512)
T ss_dssp EEE-----TTEEEEEE---------EEEEEE-ETTEEEEEEEGGGCEEETTEE
T ss_pred ccC-----CCCEEEeC---------CceEEe-cCCEEEEecccCCEEEECCEE
Confidence 411 13579999 999999 79999 999999999998864
No 25
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=99.90 E-value=2e-24 Score=173.24 Aligned_cols=88 Identities=22% Similarity=0.290 Sum_probs=82.2
Q ss_pred CCccccCC-CCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCC
Q 032813 23 SGSCGTVV-RNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEP 101 (133)
Q Consensus 23 ~~~vG~p~-p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~ 101 (133)
..++|+|+ ++.+++|+| +++++++.|++|||+|+||++++|| |++|+.|+++|. .++||+|
T Consensus 354 ~~~~G~p~~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~v~~GY----~~~p~~t~~~f~--------~~~~yrT----- 415 (617)
T 3rg2_A 354 IHTQGYPMCPDDEVWVAD-AEGNPLPQGEVGRLMTRGPYTFRGY----YKSPQHNASAFD--------ANGFYCS----- 415 (617)
T ss_dssp HHCCCEESCTTCEEEEEC-TTSCBCCTTCCEEEEEECSSSCSCC----TTCHHHHHHHBC--------TTSCEEE-----
T ss_pred ccCCCccCCCCceEEEEC-CCCCCCCCCCceEEEecCccccchh----cCChhhhhhccC--------CCCceec-----
Confidence 35789997 788999999 6899999999999999999999999 999999999996 5799999
Q ss_pred CCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 102 GRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 102 ~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||+|++++||+| |+||+|||||++|..
T Consensus 416 ----GDl~~~~~dG~l~~~GR~dd~iki~G~r 443 (617)
T 3rg2_A 416 ----GDLISIDPEGYITVQGREKDQINRGGEK 443 (617)
T ss_dssp ----EEEEEECTTSCEEEEEECSSEEEETTEE
T ss_pred ----CceEEEcCCceEEEEeecCCEEEECCEE
Confidence 999999999999 999999999999864
No 26
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=99.89 E-value=3.3e-24 Score=170.44 Aligned_cols=95 Identities=19% Similarity=0.164 Sum_probs=79.3
Q ss_pred CCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCC
Q 032813 22 KSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEP 101 (133)
Q Consensus 22 ~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~ 101 (133)
...++|+|+++ ++|+|+++++++++|++|||+|+||+++.|| |++|+.|+++|...........+||+|
T Consensus 372 ~~~~~G~p~~~--v~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY----~~~p~~t~~~f~~~~~~~~~g~~~~~T----- 440 (590)
T 3kxw_A 372 KLVSSGNPIQE--VKIIDPDTLIPCDFDQVGEIWVQSNSVAKGY----WNQPEETRHAFAGKIKDDERSAIYLRT----- 440 (590)
T ss_dssp EEECCCEESSE--EEEECTTTCCBCCTTBCEEEEEESTTSCCCB----TTCHHHHHHHHCBCCTTC---CCBEEE-----
T ss_pred eEeccCCCCCC--eEEEcCCCCcCCCCCCEEEEEEeCCcccccc----cCChhHHHHHHhccccCCCCCCcEEec-----
Confidence 34689999998 8899976699999999999999999999999 999999999996321111011239999
Q ss_pred CCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 102 GRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 102 ~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||+|++| +|+| |+||+|||||++|.+
T Consensus 441 ----GDlg~~d-dG~l~~~GR~dd~Ik~~G~~ 467 (590)
T 3kxw_A 441 ----GDLGFLH-ENELYVTGRIKDLIIIYGKN 467 (590)
T ss_dssp ----EEEEEEE-TTEEEEEEESSCHHHHHHHT
T ss_pred ----CcEEEEE-CCEEEEEcCccceEEECCEe
Confidence 9999999 9999 999999999998764
No 27
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=99.89 E-value=1.3e-23 Score=166.28 Aligned_cols=84 Identities=26% Similarity=0.478 Sum_probs=78.7
Q ss_pred ccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCC
Q 032813 25 SCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRW 104 (133)
Q Consensus 25 ~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~ 104 (133)
++|+|+|+++++|+| ++++++++|++|||+|+||++++|| |++|+.+++.+ .+|||+|
T Consensus 386 ~~G~p~~~~~~~i~d-~~g~~~~~g~~GEl~v~g~~~~~gY----~~~~~~~~~~~---------~~g~~~T-------- 443 (576)
T 3gqw_A 386 NCGKALPEHGIEIRN-EAGMPVAERVVGHICISGPSLMSGY----FGDQVSQDEIA---------ATGWLDT-------- 443 (576)
T ss_dssp BCCEECTTCEEEEEC-TTSCBCCTTBCEEEEEESTTSCCCB----TTCHHHHHHHH---------HHSCEEE--------
T ss_pred ecCCcCCCCeEEEEC-CCCCCCCCCCeEEEEEeCccccccc----cCCcccccccc---------CCCeeec--------
Confidence 899999999999999 7899999999999999999999999 99999888876 3699999
Q ss_pred CCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 105 AFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 105 tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||+|++ +||+| |+||+|||||++|.+
T Consensus 444 -GDl~~~-~dG~l~~~GR~dd~ik~~G~~ 470 (576)
T 3gqw_A 444 -GDLGYL-LDGYLYVTGRIKDLIIIRGRN 470 (576)
T ss_dssp -EEEEEE-ETTEEEEEEETTTCEEETTEE
T ss_pred -cceEEE-ECCEEEEEecCcceEEECCEE
Confidence 999999 79999 999999999998864
No 28
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=99.89 E-value=1.9e-23 Score=169.24 Aligned_cols=111 Identities=22% Similarity=0.272 Sum_probs=92.6
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCC-CCCeEEEEEc--CccccccccccCCCchhhH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPH-NQPGEICIRG--PQIMKVAELEFWSDGGHDE 77 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~-g~~Gel~i~g--p~~~~GY~~~~~~~~~~t~ 77 (133)
+||++..++.... ......+++++|+|+++++++|+|+++|++++. |+.|||+|+| |+++.|| |++|+++.
T Consensus 421 ~TE~~~~~~~~~~--~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~v~~~g~~Gel~i~g~~p~~~~gy----~~~~~~~~ 494 (663)
T 1ry2_A 421 QTESGSHLVTPLA--GGVTPMKPGSASFPFFGIDAVVLDPNTGEELNTSHAEGVLAVKAAWPSFARTI----WKNHDRYL 494 (663)
T ss_dssp CTTTCSCSEECCT--TTCCCCCTTCCCEECTTCCEEEECSSSTTCEECSSCEEEEEESSCCTTSCCEE----TTCHHHHH
T ss_pred CccccCeeeccCC--CCCcccCCCccccCcCCCeEEEEcCCCCCcCCCCCcceEEEEecCCCchhccc----ccChHHHH
Confidence 6999866554321 012245678999999999999999548999988 9999999999 5899999 99999998
Q ss_pred HHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 78 EIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 78 ~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
+.|... .+|||+| ||+|++|+||+| |+||+|||||++|..
T Consensus 495 ~~~~~~------~~g~y~T---------GDlg~~d~dG~l~i~GR~dd~Ik~~G~r 535 (663)
T 1ry2_A 495 DTYLNP------YPGYYFT---------GDGAAKDKDGYIWILGRVDDVVNVSGHR 535 (663)
T ss_dssp HHHTSS------STTSEEE---------EEEEEECTTCCEEECSCTTSCBCSSSCC
T ss_pred HhhhcC------CCCEEEc---------CCEEEEcCCCCEEEEeecCCEEEECCEE
Confidence 888411 3689999 999999999999 999999999999864
No 29
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=99.88 E-value=3.3e-23 Score=162.47 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=82.1
Q ss_pred CCCCccccCCCCcEEEEEcCCCC---ccCCCCCCeEEEEE-cCccccccccccCCCchhhHHHHhhhhcccCCCCccccc
Q 032813 21 TKSGSCGTVVRNAELKVIDPEIG---ASLPHNQPGEICIR-GPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASK 96 (133)
Q Consensus 21 ~~~~~vG~p~p~~~v~i~d~~~g---~~~~~g~~Gel~i~-gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t 96 (133)
.+.+++|+|+++++++|+|+ ++ +++++|+.|||+|+ ||+++.|| |++|+.|+++| .+|||+|
T Consensus 318 ~~~~~~g~p~~~~~~~i~~~-~~~~~~~~~~g~~GEl~v~gg~~~~~GY----~~~~~~t~~~f---------~~g~~~T 383 (504)
T 1t5h_X 318 PKTGTEMAPGFFSEVRIVRI-GGGVDEIVANGEEGELIVAASDSAFVGY----LNQPQATAEKL---------QDGWYRT 383 (504)
T ss_dssp CSSSSEEBCCTTCCEEEECT-TSCTTCBCCTTCCEEEEEECCTTSCCCB----TTCHHHHHHHE---------ETTEEEE
T ss_pred CCCCccccCCCCCceeEEec-cCCCCCcCCCCCcceEEEeCCceeecee----cCCchhhhhhh---------cCCcccc
Confidence 45678999999999999994 56 89999999999999 99999999 99999999999 3689999
Q ss_pred ccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 97 AQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 97 ~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
||+|++|+||+| |+||+|||||++|.+
T Consensus 384 ---------GDlg~~~~dG~l~~~GR~dd~ik~~G~~ 411 (504)
T 1t5h_X 384 ---------SDVAVWTPEGTVRILGRVDDMIISGGEN 411 (504)
T ss_dssp ---------EEEEEECTTSCEEEEEEGGGCEEETTEE
T ss_pred ---------CcEEEECCCceEEEeCcccCEEEECCEE
Confidence 999999999999 999999999999864
No 30
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=99.85 E-value=4.2e-22 Score=154.58 Aligned_cols=85 Identities=16% Similarity=0.194 Sum_probs=71.4
Q ss_pred CCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhc---ccCCCCccccccc
Q 032813 22 KSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRL---TMGSSLGWASKAQ 98 (133)
Q Consensus 22 ~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~---~~~~~~gw~~t~~ 98 (133)
...++|+|++ ++++|+|++++++++.|++|||+|+||+++.|| |++|++|+++|..... .....++||+|
T Consensus 392 ~~~~~G~p~~-~~~~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY----~~~pe~t~~~f~~~~~~~~~~~~~~~w~~T-- 464 (480)
T 3t5a_A 392 SLISYMLPRS-PIVRIVDSDTCIECPDGTVGEIWVHGDNVANGY----WQKPDESERTFGGKIVTPSPGTPEGPWLRT-- 464 (480)
T ss_dssp EEECEECCSS-SEEEEEETTTTEECCTTBCEEEEEESTTSCCCB----TTBHHHHHHHHCBCCSSCCTTCCCCCBEEE--
T ss_pred eeeecCcccC-CEEEEEcCCCCcCCCCCCEEEEEEeCCcccccc----ccCcchhHHHHhhhhccccCCCCCCCeeec--
Confidence 3468999999 999999976689999999999999999999999 9999999999952111 01114579999
Q ss_pred CCCCCCCCcEEEEcCCCeE-EEee
Q 032813 99 AEPGRWAFDLALRTRAGYE-LKKR 121 (133)
Q Consensus 99 ~~~~~~tGD~g~~d~dG~l-~~GR 121 (133)
||+|++| ||+| |+||
T Consensus 465 -------GDlg~~d-dG~l~~~GR 480 (480)
T 3t5a_A 465 -------GDSGFVT-DGKMFIIGR 480 (480)
T ss_dssp -------EEEEEEE-TTEEEECC-
T ss_pred -------cceeeEE-CCEEEEeCC
Confidence 9999997 9999 9998
No 31
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.85 E-value=1.9e-22 Score=157.83 Aligned_cols=100 Identities=19% Similarity=0.257 Sum_probs=82.3
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
+||++..++.... .....+..++|+|+++++++|+|++ +++.|||+|+|++++.|| |++|+.+++ |
T Consensus 307 ~TE~~~~~~~~~~---~~~~~~~~~~G~p~~~~~~~i~d~~------~~~~GEl~v~g~~~~~gY----~~~~~~t~~-~ 372 (501)
T 3ipl_A 307 MTETCSQFLTATP---EMLHARPDTVGMPSANVDVKIKNPN------KEGHGELMIKGANVMNGY----LYPTDLTGT-F 372 (501)
T ss_dssp EGGGTEEEEEECH---HHHHHCTTCCBEECTTCEEEEESCC------SSCCEEEEEESTTSCSCC----SBSTTCCCS-E
T ss_pred ccccccceeecCc---cccccCCCCCCCCCCCcEEEEecCC------CCCccEEEEeccchhhhh----CcChhhcch-h
Confidence 5898765443321 1112356789999999999999953 567899999999999999 999998876 5
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeE-EEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYE-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l-~~GR~dd~Iki~~~~ 132 (133)
.+|||+| ||+|++|+||+| |+||+|||||++|.+
T Consensus 373 ---------~~g~~~T---------GDl~~~~~~G~l~~~GR~dd~ik~~G~~ 407 (501)
T 3ipl_A 373 ---------ENGYFNT---------GDIAEIDHEGYVMIYDRRKDLIISGGEN 407 (501)
T ss_dssp ---------ETTEEEE---------EEEEEECTTSCEEEEEECCCCEECSSCE
T ss_pred ---------cCCceec---------CCEEEEcCCCeEEEEccccceEEECCEE
Confidence 4699999 999999999999 999999999999864
No 32
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=99.58 E-value=1.4e-15 Score=117.10 Aligned_cols=74 Identities=19% Similarity=0.196 Sum_probs=62.7
Q ss_pred ccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCC
Q 032813 25 SCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRW 104 (133)
Q Consensus 25 ~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~ 104 (133)
.++.|.+++.++|+|+++++++++|+.|||+|+|+.- +.| ..+||+|
T Consensus 257 g~~~~~~~~~v~i~d~~~g~~~~~g~~Gel~v~~~~~----------------~~~---------~~~~y~T-------- 303 (436)
T 3qov_A 257 GMHFWEDCYLVEIIDPETGEPVPEGEIGELVLTTLDR----------------EMM---------PLIRYRT-------- 303 (436)
T ss_dssp SEEECTTTEEEEEECTTTCSBCSTTCCEEEEEEESSC----------------CSS---------CCCSEEE--------
T ss_pred eeEEccCceEEEEEECCCCCCCCCCCceEEEEeccCc----------------CCc---------eEEEEEc--------
Confidence 3677888999999998889999999999999998521 111 3589999
Q ss_pred CCcEEEEcCCC------e---E-EEeecCCeEEeCCCC
Q 032813 105 AFDLALRTRAG------Y---E-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 105 tGD~g~~d~dG------~---l-~~GR~dd~Iki~~~~ 132 (133)
||+|+++++| + + |+||+||+||++|.+
T Consensus 304 -GDl~~~~~~gc~cG~~~~~il~i~GR~dd~ik~~G~~ 340 (436)
T 3qov_A 304 -RDLTRILPGKCPCGRTHLRIDRIKGRSDDMFIIKGVN 340 (436)
T ss_dssp -EEEECEECSCCTTCCCSCEECCCCCBSSSCEEETTEE
T ss_pred -CCEEEEcCCCCCCCCCccccCcccCccCCEEEECCEE
Confidence 9999999998 5 7 999999999998863
No 33
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=99.51 E-value=5.2e-15 Score=113.97 Aligned_cols=73 Identities=19% Similarity=0.182 Sum_probs=60.6
Q ss_pred cccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCCC
Q 032813 26 CGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRWA 105 (133)
Q Consensus 26 vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~t 105 (133)
++.|.+++.++|+|++++++++.|+.|||+|+|.. + ++| ..+||+|
T Consensus 263 ~~~~~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~t----------~------~~~---------~~~~y~T--------- 308 (437)
T 2y27_A 263 PTIWEDHFYPEIIDPETGEVLPDGELGELVFTSLT----------K------EAL---------PIIRYRT--------- 308 (437)
T ss_dssp CEECTTTEEEEEECTTTCCBCCTTCCEEEEEEESS----------C------SSS---------CCCSEEE---------
T ss_pred eeEccCceEEEEEcCCCCCCCCCCCccEEEEecCC----------c------CCc---------hhheeec---------
Confidence 56677899999999777999999999999999732 1 112 3589999
Q ss_pred CcEEEEcC-CCe-----E-EEeecCCeEEeCCCC
Q 032813 106 FDLALRTR-AGY-----E-LKKRKKVWVRFDPLF 132 (133)
Q Consensus 106 GD~g~~d~-dG~-----l-~~GR~dd~Iki~~~~ 132 (133)
||+|++++ +|+ + |+||+||+||++|.+
T Consensus 309 GDl~~~~~~~G~~~~~i~~i~GR~~d~i~~~G~~ 342 (437)
T 2y27_A 309 RDLTRLLPGTARTMRRMEKITGRSDDMMIVRGVN 342 (437)
T ss_dssp EEEECEECCSSSSSCEECCCCEEGGGCEEETTEE
T ss_pred CCEEEEeCCCCCCccccCccccccCCeEEECCeE
Confidence 99999999 698 4 899999999998853
No 34
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=99.49 E-value=1.1e-14 Score=112.39 Aligned_cols=73 Identities=16% Similarity=0.137 Sum_probs=60.4
Q ss_pred cccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCCC
Q 032813 26 CGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRWA 105 (133)
Q Consensus 26 vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~t 105 (133)
++.|.+++.++|+|+++++++++|+.|||+|+|.. + +.| ..+||+|
T Consensus 265 ~~~~~~~~~~~i~d~~~g~~~~~G~~Gel~v~~~t----------~------~~~---------p~~~y~T--------- 310 (443)
T 2y4o_A 265 PVIWEDHFYPEIIDPVTGEVLPDGSQGELVFTSLT----------K------EAM---------PVIRYRT--------- 310 (443)
T ss_dssp EEECTTTEEEEEECTTTCCBCCTTCCEEEEEEESS----------C------SSS---------CCSSEEE---------
T ss_pred eEEccCCeEEEEEcCCCCCCCCCCCceEEEEeCCC----------c------ccC---------hhheeec---------
Confidence 45567899999999778999999999999999732 1 112 3589999
Q ss_pred CcEEEEcCC-Ce------EEEeecCCeEEeCCCC
Q 032813 106 FDLALRTRA-GY------ELKKRKKVWVRFDPLF 132 (133)
Q Consensus 106 GD~g~~d~d-G~------l~~GR~dd~Iki~~~~ 132 (133)
||+|+++++ |+ .|+||+||+||++|.+
T Consensus 311 GDl~~~~~~cG~~~~~l~~i~GR~~d~i~~~G~~ 344 (443)
T 2y4o_A 311 RDLTALLPPTARAMRRLAKITGRSDDMLIVRGVN 344 (443)
T ss_dssp EEEECEECCSSSSSCEECCCCEESSCCEEETTEE
T ss_pred CCEEEEcCCCCCCccccCccccccCCeEEECCEE
Confidence 999999999 97 3889999999999854
No 35
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=99.46 E-value=7.7e-14 Score=105.49 Aligned_cols=79 Identities=13% Similarity=0.023 Sum_probs=61.8
Q ss_pred CCCCCcccccccCCCCCCCCCCCCccccCCCCcEEEEEcCCCCccCCCCCCeEEEEEcCccccccccccCCCchhhHHHH
Q 032813 1 MTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVIDPEIGASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEII 80 (133)
Q Consensus 1 ~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f 80 (133)
|||++..++..... ....+++|.+.|++++.+.+ .|||+++|+.+
T Consensus 181 ~TEt~~~~~~~~~~-----~~~~g~~~~~~pgv~~~~~~-----------~Gel~~~g~~~------------------- 225 (358)
T 4gs5_A 181 MTETVSHVALKALN-----GPEASELYVFLPGIQYGVDE-----------RGCLHISGAVT------------------- 225 (358)
T ss_dssp CGGGSSEEEEEECS-----STTCCSCEEECTTCEEEECT-----------TSEEEEESGGG-------------------
T ss_pred cccccceeeccccc-----ccccceeeccCCCeEEEecC-----------cCceEEecccc-------------------
Confidence 68988766665421 24457889999999888754 38999987631
Q ss_pred hhhhcccCCCCcccccccCCCCCCCCcEEEEcCCCeEEEeecCCeEEeCCCC
Q 032813 81 KLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRAGYELKKRKKVWVRFDPLF 132 (133)
Q Consensus 81 ~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~dG~l~~GR~dd~Iki~~~~ 132 (133)
.++||+| ||+|++|++|++|+||+|||||++|.+
T Consensus 226 ---------~~g~~~T---------GDlg~~d~~g~~~~GR~dd~Ik~~G~~ 259 (358)
T 4gs5_A 226 ---------NGQTVQT---------NDLVEIHGNAFQWIGRADNVINSGGVK 259 (358)
T ss_dssp ---------TTCCEEE---------EEEEEECSSEEEEEEEGGGEEEETTEE
T ss_pred ---------cCcceec---------CCccccccCceEEcccccCeEEECCEE
Confidence 3589999 999999999955889999999999864
No 36
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=98.80 E-value=6.7e-10 Score=83.62 Aligned_cols=35 Identities=11% Similarity=0.115 Sum_probs=32.1
Q ss_pred ccccC------CCCcEEEEEcCCCCccCCCCCCeEEEEEcC
Q 032813 25 SCGTV------VRNAELKVIDPEIGASLPHNQPGEICIRGP 59 (133)
Q Consensus 25 ~vG~p------~p~~~v~i~d~~~g~~~~~g~~Gel~i~gp 59 (133)
++|+| +|+++++|+|+++++++++|+.|||+|++.
T Consensus 281 ~~G~~~~~~~~~~~~~v~ivD~~~g~~vp~G~~GEl~vt~l 321 (369)
T 3hgu_A 281 SESQQVIYDSFSPFITYDVVDSITAQTVEYGERGNVIVTHL 321 (369)
T ss_dssp TTCSSCEEECCTTTEEEEEECTTTCSBCCTTCEEEEEEEEE
T ss_pred cCCCcccccCCCCCeEEEEECCCCCcCCCCCCceEEEEEEc
Confidence 58999 999999999976899999999999999873
No 37
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=94.16 E-value=0.047 Score=43.83 Aligned_cols=49 Identities=16% Similarity=0.045 Sum_probs=37.6
Q ss_pred cCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcC----CCeE-EE
Q 032813 45 SLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTR----AGYE-LK 119 (133)
Q Consensus 45 ~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~----dG~l-~~ 119 (133)
.|..|+.+||+|...+ |. |. |++ ||+.++.. ...+ |+
T Consensus 380 eVe~G~~YelViTt~~---GL----~R----------------------Yr~---------GD~v~v~~f~~~~p~i~f~ 421 (581)
T 4eql_A 380 DVKLGCTYEPVVTNFA---GL----YR----------------------MRV---------GDIVLVTGFYNNAPQFKFV 421 (581)
T ss_dssp GCCTTCEEEEEEECSS---SC----CS----------------------EEC---------CEEEEEEEEETTEEEEEEE
T ss_pred HcCCCceEEEEEeecc---ce----ee----------------------EEc---------CCEEEEcccCCCCcEEEEE
Confidence 4567889999998663 33 21 567 99999875 3468 99
Q ss_pred eecCCeEEeCCC
Q 032813 120 KRKKVWVRFDPL 131 (133)
Q Consensus 120 GR~dd~Iki~~~ 131 (133)
||.+++|++.|.
T Consensus 422 gR~~~~l~~~Ge 433 (581)
T 4eql_A 422 RRENVVLSIDSD 433 (581)
T ss_dssp EETTEEECSSSC
T ss_pred EecCCEEEeeee
Confidence 999999999874
No 38
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=93.87 E-value=0.049 Score=43.93 Aligned_cols=50 Identities=20% Similarity=0.079 Sum_probs=38.7
Q ss_pred ccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcC----CCeE-E
Q 032813 44 ASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTR----AGYE-L 118 (133)
Q Consensus 44 ~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~----dG~l-~ 118 (133)
..|..|+.+||+|... .|. |. |++ ||+.+++. ...+ |
T Consensus 391 ~eVe~G~~YelViTt~---~GL----~R----------------------Yr~---------GD~v~v~~f~~~~p~i~~ 432 (609)
T 4b2g_A 391 AHVEVGKEYELVITTY---AGL----YR----------------------YRV---------GDILRVTGFHNSAPQFHF 432 (609)
T ss_dssp GGCCTTCEEEEEEECT---TSC----CS----------------------EEE---------EEEEEEEEEETTEEEEEE
T ss_pred hHcCCCCeEEEehhhh---hhh----hh----------------------eec---------CCEEEEeecCCCCcEEEE
Confidence 3567899999999755 355 31 677 99999873 4568 9
Q ss_pred EeecCCeEEeCCC
Q 032813 119 KKRKKVWVRFDPL 131 (133)
Q Consensus 119 ~GR~dd~Iki~~~ 131 (133)
+||.+++|++.|.
T Consensus 433 ~gR~~~~l~~~Ge 445 (609)
T 4b2g_A 433 VRRKNVLLSIDSD 445 (609)
T ss_dssp EEETTCCBCSSSC
T ss_pred EEecCCeEEcccc
Confidence 9999999999874
No 39
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=92.26 E-value=0.1 Score=41.86 Aligned_cols=50 Identities=8% Similarity=-0.059 Sum_probs=38.1
Q ss_pred ccCCCCCCeEEEEEcCccccccccccCCCchhhHHHHhhhhcccCCCCcccccccCCCCCCCCcEEEEcCC----CeE-E
Q 032813 44 ASLPHNQPGEICIRGPQIMKVAELEFWSDGGHDEEIIKLNRLTMGSSLGWASKAQAEPGRWAFDLALRTRA----GYE-L 118 (133)
Q Consensus 44 ~~~~~g~~Gel~i~gp~~~~GY~~~~~~~~~~t~~~f~~~~~~~~~~~gw~~t~~~~~~~~tGD~g~~d~d----G~l-~ 118 (133)
..|..|+.+||+|...+ |. |. |++ ||+.++..- -.+ |
T Consensus 386 ~eve~G~~YelviTt~~---GL----~R----------------------Yr~---------GD~v~v~g~~~~~p~~~~ 427 (581)
T 4epl_A 386 TQVKIGEEYEVVITNYA---GL----YR----------------------YRL---------GDVVKVIGFYNNTPQLKF 427 (581)
T ss_dssp GGCCTTCEEEEEEESTT---SC----SS----------------------EEE---------EEEEEEEEEETTEEEEEE
T ss_pred HHcCCCCeEEEEEeecc---ce----ee----------------------EEc---------CCEEEEecccCCCcEEEE
Confidence 35678999999998763 33 21 577 999988742 358 9
Q ss_pred EeecCCeEEeCCC
Q 032813 119 KKRKKVWVRFDPL 131 (133)
Q Consensus 119 ~GR~dd~Iki~~~ 131 (133)
+||.+++|++.|.
T Consensus 428 ~gR~~~~l~~~Ge 440 (581)
T 4epl_A 428 ICRRNLILSINID 440 (581)
T ss_dssp EEETTCCBCSSSC
T ss_pred EeecCCeEEeeee
Confidence 9999999999874
No 40
>1smp_I Erwinia chrysanthemi inhibitor; complex (metalloprotease/inhibitor); 2.30A {Erwinia chrysanthemi} SCOP: b.61.2.1
Probab=42.72 E-value=20 Score=21.88 Aligned_cols=26 Identities=27% Similarity=0.491 Sum_probs=21.3
Q ss_pred CCcccccccCCCCCCCCc-EEEEcCCCe-E-EEeecCC
Q 032813 90 SLGWASKAQAEPGRWAFD-LALRTRAGY-E-LKKRKKV 124 (133)
Q Consensus 90 ~~gw~~t~~~~~~~~tGD-~g~~d~dG~-l-~~GR~dd 124 (133)
..+|+-| +| +.-.+.||. | |..|.++
T Consensus 55 p~~W~pt---------PDGi~L~~~dGs~l~ff~r~~~ 83 (101)
T 1smp_I 55 PVGWRPT---------PDGLTLTQADGSAVAFFSRNRD 83 (101)
T ss_dssp CCEEEEC---------SSEEEEECTTSCEEEEEEEETT
T ss_pred CcccccC---------CCEEEEEcCCCCEEEEecccCC
Confidence 4589988 88 667788997 6 9999988
No 41
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=41.85 E-value=23 Score=21.47 Aligned_cols=31 Identities=26% Similarity=0.382 Sum_probs=23.0
Q ss_pred CCCcEEEEEcCCCCccCC----CCC--CeEEEEEcCc
Q 032813 30 VRNAELKVIDPEIGASLP----HNQ--PGEICIRGPQ 60 (133)
Q Consensus 30 ~p~~~v~i~d~~~g~~~~----~g~--~Gel~i~gp~ 60 (133)
+|+-++.|++.++|+... +|+ .|+||+.|+.
T Consensus 15 ~~~E~V~IvNvnNG~Rf~TYvI~GerGSG~I~lNGAA 51 (96)
T 1vc3_B 15 LPFEQVDIYDITNGARLTTYALPGERGSGVIGINGAA 51 (96)
T ss_dssp CTTCEEEEEETTTCCEEEEECEEECTTTTCEEEEGGG
T ss_pred CCCCEEEEEECCCCceEEEEEEEccCCCCeEEEchHH
Confidence 588899999987787543 233 4889999874
No 42
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=36.14 E-value=33 Score=21.40 Aligned_cols=32 Identities=22% Similarity=0.551 Sum_probs=23.4
Q ss_pred CCCCcEEEEEcCCCCccCC----CCC--CeEEEEEcCc
Q 032813 29 VVRNAELKVIDPEIGASLP----HNQ--PGEICIRGPQ 60 (133)
Q Consensus 29 p~p~~~v~i~d~~~g~~~~----~g~--~Gel~i~gp~ 60 (133)
-+|+-++.|++.++|+... +|+ .|+||+.|+.
T Consensus 41 i~~~E~V~I~NvnNG~Rf~TYvI~GerGSg~I~lNGAA 78 (114)
T 3oug_A 41 IIENEKVQVVNLNNGERLETYVIKGEPNSKTIALNGPA 78 (114)
T ss_dssp CCTTBEEEEEETTTCCEEEEEEEEECTTSCCEEEEGGG
T ss_pred CCcCCEEEEEECCCCceEEEEEEEccCCCCEEEeCCHH
Confidence 4688999999987787542 232 4889999874
No 43
>1jiw_I Proteinase inhibitor; pseudomonas aeruginosa alkaline protease inhibitor, hydrolase/hyrolase inhibitor complex; 1.74A {Pseudomonas aeruginosa} SCOP: b.61.2.1 PDB: 2rn4_A
Probab=33.11 E-value=27 Score=21.49 Aligned_cols=26 Identities=27% Similarity=0.368 Sum_probs=21.1
Q ss_pred CCcccccccCCCCCCCCc-EEEEcCCCe-E-EEeecCC
Q 032813 90 SLGWASKAQAEPGRWAFD-LALRTRAGY-E-LKKRKKV 124 (133)
Q Consensus 90 ~~gw~~t~~~~~~~~tGD-~g~~d~dG~-l-~~GR~dd 124 (133)
..+|+-| +| +.-++.||. | |..|.++
T Consensus 58 p~~W~pt---------PdGi~L~~~dGs~l~ff~r~~~ 86 (106)
T 1jiw_I 58 PRAWRPT---------PAGIALLERGGLTLMLLGRQGE 86 (106)
T ss_dssp CCEEEEE---------TTEEEEECTTSCEEEEEEEEET
T ss_pred CcccccC---------CCeEEEEcCCCCEEEeeeecCC
Confidence 3589988 88 667788887 6 8999988
No 44
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=30.69 E-value=40 Score=20.41 Aligned_cols=31 Identities=23% Similarity=0.573 Sum_probs=23.1
Q ss_pred CCCcEEEEEcCCCCccCC----CCC-CeEEEEEcCc
Q 032813 30 VRNAELKVIDPEIGASLP----HNQ-PGEICIRGPQ 60 (133)
Q Consensus 30 ~p~~~v~i~d~~~g~~~~----~g~-~Gel~i~gp~ 60 (133)
+|+-++.|++.++|+... +|+ .|+||+.|+.
T Consensus 14 l~~E~V~IvNvnNG~RfeTYvI~GerSG~I~lNGAA 49 (97)
T 1uhe_A 14 REGMKVEIVDVNNGERFSTYVILGKKRGEICVNGAA 49 (97)
T ss_dssp CTTCEEEEEETTTCCEEEEECEEECSTTCEEEEGGG
T ss_pred CCCCEEEEEECCCCceEEEEEEeeccCCeEEEchHH
Confidence 588899999987786542 222 6999999874
No 45
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=30.69 E-value=42 Score=21.65 Aligned_cols=32 Identities=25% Similarity=0.492 Sum_probs=23.5
Q ss_pred CCCCcEEEEEcCCCCccCC----CCC--CeEEEEEcCc
Q 032813 29 VVRNAELKVIDPEIGASLP----HNQ--PGEICIRGPQ 60 (133)
Q Consensus 29 p~p~~~v~i~d~~~g~~~~----~g~--~Gel~i~gp~ 60 (133)
-+|+-+|.|++.++|+... +|+ .|+||+.|+.
T Consensus 38 Il~~EkV~IvNvnNG~RfeTYvI~GerGSG~I~lNGAA 75 (139)
T 2c45_A 38 LLEGEQVTIVDIDNGARLVTYAITGERGSGVIGINGAA 75 (139)
T ss_dssp CCSSCCEEEEETTTCCEEEECEEEECTTTTCEEEESST
T ss_pred CCCCCEEEEEECCCCceEEEEEEEccCCCCEEEEchHH
Confidence 4688899999987787553 233 4889999974
No 46
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=27.84 E-value=34 Score=22.22 Aligned_cols=32 Identities=13% Similarity=0.325 Sum_probs=23.3
Q ss_pred CCCCcEEEEEcCCCCccCC----CCC--CeEEEEEcCc
Q 032813 29 VVRNAELKVIDPEIGASLP----HNQ--PGEICIRGPQ 60 (133)
Q Consensus 29 p~p~~~v~i~d~~~g~~~~----~g~--~Gel~i~gp~ 60 (133)
-+|+-+|.|++.++|+... +|+ .|+||+.|+.
T Consensus 55 Il~~EkV~IvNvnNG~RfeTYvI~GerGSG~I~lNGAA 92 (143)
T 1pqh_A 55 ILENEAIDIWNVTNGKRFSTYAIAAERGSRIISVNGAA 92 (143)
T ss_dssp CCTTCEEEEEETTTCCEEEEEEEEECTTCCCEECCGGG
T ss_pred CCCCCEEEEEECCCCceEEEEEEEccCCCceEEechHH
Confidence 4688999999987787543 233 4889998864
No 47
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=26.04 E-value=43 Score=20.45 Aligned_cols=31 Identities=19% Similarity=0.545 Sum_probs=22.8
Q ss_pred CCCcEEEEEcCCCCccCC----CC-CCeEEEEEcCc
Q 032813 30 VRNAELKVIDPEIGASLP----HN-QPGEICIRGPQ 60 (133)
Q Consensus 30 ~p~~~v~i~d~~~g~~~~----~g-~~Gel~i~gp~ 60 (133)
+|+-++.|++.++|+... +| ..|+||+.|+.
T Consensus 15 ~~~E~V~I~NvnNG~Rf~TYvI~GeGSG~I~lNGAA 50 (102)
T 3plx_B 15 LEYEKVQVVNVNNGARFETYTIATQEEGVVCLNGAA 50 (102)
T ss_dssp CTTCEEEEEETTTCCEEEEECEEESSTTCEEEEGGG
T ss_pred CCCCEEEEEECCCCcEEEEEEEEcCCCCEEEeCcHH
Confidence 588899999987786542 12 46889999874
Done!