BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032821
(133 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O28033|Y2251_ARCFU Protein AF_2251 OS=Archaeoglobus fulgidus (strain ATCC 49558 /
VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_2251
PE=3 SV=1
Length = 229
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 1 MALLPEGTTELLHHDKLLLPLIKCQNVIILTATNVTELDKEWNCLIELLRSGGLSLMEPY 60
++ +PEG+ E++ +D P +NV ++ E++ + ++E G Y
Sbjct: 112 ISSVPEGS-EIVWNDVGAAPAFIVENVAVMPGVP-AEMENTFEKILERFEKG------EY 163
Query: 61 TSKSLTTNLSDLEAAQPLSKLCLEFPDLHIGCYRKSRQGPLIISFEGKDQARIEAAIESL 120
+ + N +++ L+++ + PD+ IG Y K G +++ F G+D+ +++ A++
Sbjct: 164 HEEVVKVNGFEVKIVDKLNQVVRDNPDVEIGSYPKP--GYVMVKFSGRDKEKVKKAVKQF 221
>sp|P29814|NTP1_AMEPV Nucleoside triphosphatase I OS=Amsacta moorei entomopoxvirus
GN=NPH1 PE=3 SV=2
Length = 648
Score = 29.3 bits (64), Expect = 7.4, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 16 KLLLPLIKCQN--VIILTATNVTELDKEWNCLIELLRSGGLSLMEPYTSKSLTTNLSDL 72
K L+ L +N ++ ++AT VT E+N LI LLR +++ E Y + N +L
Sbjct: 174 KKLIKLANFENNKILCMSATPVTNNISEFNNLIGLLRPNVMNIKEEYINNGKLINFKEL 232
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,709,339
Number of Sequences: 539616
Number of extensions: 1582619
Number of successful extensions: 3927
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3926
Number of HSP's gapped (non-prelim): 4
length of query: 133
length of database: 191,569,459
effective HSP length: 99
effective length of query: 34
effective length of database: 138,147,475
effective search space: 4697014150
effective search space used: 4697014150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)