BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032822
(133 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6L440|R1A3_SOLDE Putative late blight resistance protein homolog R1A-3 OS=Solanum
demissum GN=R1A-3 PE=5 SV=2
Length = 775
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 1 MKKAVLKLGVHDDKEKKKAMKTVSGLAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRKLC 60
+KK +L+ + DKE A K ++ L GVDSIS+DM EKKLTV GD++ + + KL
Sbjct: 711 IKKMILQFDISHDKEIDNAFKRLASLPGVDSISIDMIEKKLTVGGDMNANEVRLVVGKLI 770
Query: 61 HTEIL 65
+ +L
Sbjct: 771 DSGML 775
>sp|Q6L406|R1B19_SOLDE Putative late blight resistance protein homolog R1B-19 OS=Solanum
demissum GN=R1B-19 PE=5 SV=2
Length = 1326
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 1 MKKAVLKLGVHDDKEKKKAMKTVSGLAGVDSISMDMKEKKLTVIGDIDPVSIVS 54
++K LKL + D++ KA K + G++S+S D KEKKLTV GD+D S +S
Sbjct: 1209 IEKKTLKLNLSHDEDIPKAFKRLFLCPGIESVSTDRKEKKLTVTGDVDAGSSIS 1262
>sp|Q6L3Z4|R1B12_SOLDE Putative late blight resistance protein homolog R1B-12 OS=Solanum
demissum GN=R1B-12 PE=3 SV=2
Length = 1348
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 1 MKKAVLKLGVHDDKEKKKAMKTVSGLAGVDSISMDMKEKKLTVIGDID 48
+KK VLK ++KE KA + L G+ SI++D EKK VIGD+D
Sbjct: 1284 VKKMVLKFDTSNEKEISKAFDRLLSLPGIQSIAVDSNEKKFIVIGDMD 1331
>sp|Q6L403|R1B17_SOLDE Putative late blight resistance protein homolog R1B-17 OS=Solanum
demissum GN=R1B-17 PE=3 SV=1
Length = 1312
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 1 MKKAVLKLGVHDDKEKKKAMKTVSGLAGVDSISMDMKEKKLTVIGDIDPVS---IVSKLR 57
+KK + K+ V +K + + K ++ L G+ S++ D +KKLTV GD+D +VSKLR
Sbjct: 1248 IKKMMWKVDVGVNKGRLETFKRLAPLPGIKSVAFDFNKKKLTVTGDMDANEVQLVVSKLR 1307
Query: 58 K 58
K
Sbjct: 1308 K 1308
>sp|Q6L3Z7|R1B14_SOLDE Putative late blight resistance protein homolog R1B-14 OS=Solanum
demissum GN=R1B-14 PE=3 SV=1
Length = 1317
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 1 MKKAVLKLGVHD--DKEKKKAMKTVSGLAGVDSISMDMKEKKLTVIGDIDPVS---IVSK 55
+KK VLK ++ DK + + K + L GV S+ DM EKK+TV G +D +VSK
Sbjct: 1251 IKKMVLKFDIYQNHDKGRLETFKKLVPLPGVKSVRFDMDEKKVTVTGVMDANEVQLVVSK 1310
Query: 56 LRK 58
LRK
Sbjct: 1311 LRK 1313
>sp|Q6L3Y2|R1B11_SOLDE Putative late blight resistance protein homolog R1B-11 OS=Solanum
demissum GN=R1B-11 PE=5 SV=1
Length = 1252
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 1 MKKAVLKLG-VHDDKEKKKAMKTVSGLAGVDSISMDMKEKKLTVIGDIDPVS---IVSKL 56
+KK VLK H D+E +K + S L G+ SIS++ EKKLTV GD+D +V KL
Sbjct: 1190 IKKLVLKFDRFHGDEEIRKRL---SSLPGIKSISINRGEKKLTVGGDVDADEVRLVVGKL 1246
Query: 57 RK 58
K
Sbjct: 1247 NK 1248
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
Length = 153
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 29/40 (72%)
Query: 17 KKAMKTVSGLAGVDSISMDMKEKKLTVIGDIDPVSIVSKL 56
+K ++V G+ GV S++++ K K+TV+G +DP +V+++
Sbjct: 41 RKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARM 80
>sp|Q6L3N7|R1C3_SOLDE Putative late blight resistance protein homolog R1C-3 OS=Solanum
demissum GN=R1C-3 PE=3 SV=1
Length = 1292
Score = 37.4 bits (85), Expect = 0.029, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 26 LAGVDSISMDMKEKKLTVIGDIDPVS---IVSKLRKLCHTE 63
+ G++SIS DMKEKKLTV D+D +V KLR + + +
Sbjct: 1237 MKGIESISTDMKEKKLTVTRDVDADEVQLVVEKLRNVAYAD 1277
>sp|Q6L3L0|R1B23_SOLDE Putative late blight resistance protein homolog R1B-23 OS=Solanum
demissum GN=R1B-23 PE=3 SV=1
Length = 1262
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 26 LAGVDSISMDMKEKKLTVIGDIDPVS---IVSKLRKLCHTE 63
+ G++SIS DMKEKKLTV D+D +V KLR + + +
Sbjct: 1207 MKGIESISTDMKEKKLTVTRDVDADEVQLVVEKLRNVAYAD 1247
>sp|Q6L438|R1A6_SOLDE Putative late blight resistance protein homolog R1A-6 OS=Solanum
demissum GN=R1A-6 PE=3 SV=2
Length = 1306
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 28 GVDSISMDMKEKKLTVIGDIDPVS---IVSKLRK 58
G++S+S D KEKKLTV GD+D +V KLRK
Sbjct: 1267 GIESVSSDEKEKKLTVTGDVDADEVQLVVEKLRK 1300
>sp|Q60CZ8|R1A10_SOLDE Putative late blight resistance protein homolog R1A-10 OS=Solanum
demissum GN=R1A-10 PE=3 SV=1
Length = 1306
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 28 GVDSISMDMKEKKLTVIGDIDPVS---IVSKLRK 58
G++S+S D KEKKLTV GD+D +V KLRK
Sbjct: 1267 GIESVSSDEKEKKLTVTGDVDADEVQLVVEKLRK 1300
>sp|Q6L400|R1B16_SOLDE Putative late blight resistance protein homolog R1B-16 OS=Solanum
demissum GN=R1B-16 PE=3 SV=1
Length = 1284
Score = 33.1 bits (74), Expect = 0.46, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 26 LAGVDSISMDMKEKKLTVIGDIDPVS---IVSKLRK 58
L G++SIS D KEKKLTV D+D +V K RK
Sbjct: 1245 LIGIESISTDTKEKKLTVTRDVDADEVQLVVEKQRK 1280
>sp|Q8TFZ1|XRN2_ASPFU 5'-3' exoribonuclease 2 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rat1 PE=3
SV=4
Length = 1058
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 30 DSISMDMKEKKLTVIGDIDPVSIVSKLRKLCHTEILSVGPAKEPEKKKEEPKKEEAKKDD 89
D + ++ +KL +I +D V+ +K+ + S AKE ++KKEE +K AK++
Sbjct: 86 DRVVNMVRPRKLLMIA-VDGVAPRAKMNQQRARRFRSAQEAKEADEKKEEFRKMLAKQNG 144
Query: 90 KKKDEPKKDDV 100
K DE +++V
Sbjct: 145 NKVDEELQEEV 155
>sp|A7ZC69|IF2_CAMC1 Translation initiation factor IF-2 OS=Campylobacter concisus
(strain 13826) GN=infB PE=3 SV=1
Length = 885
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 73 PEKKKEEPKKEEAKKDDKKKDEPKKDD 99
PEK K EPKKE ++K K EPKK++
Sbjct: 102 PEKAKAEPKKEAQISEEKPKTEPKKEE 128
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.128 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,658,393
Number of Sequences: 539616
Number of extensions: 2164329
Number of successful extensions: 28745
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 327
Number of HSP's that attempted gapping in prelim test: 21290
Number of HSP's gapped (non-prelim): 5419
length of query: 133
length of database: 191,569,459
effective HSP length: 99
effective length of query: 34
effective length of database: 138,147,475
effective search space: 4697014150
effective search space used: 4697014150
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)