BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032827
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q28ZX3|PABP2_DROPS Polyadenylate-binding protein 2 OS=Drosophila pseudoobscura
pseudoobscura GN=Pabp2 PE=3 SV=1
Length = 225
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGN 74
EL+ +K R+KEMEEEA ++QM ++V +MA S AA SL ++E+D+RSV+VGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLAAVPLSLEEKQEIDTRSVYVGN 102
Query: 75 V 75
V
Sbjct: 103 V 103
>sp|Q7KNF2|PABP2_DROME Polyadenylate-binding protein 2 OS=Drosophila melanogaster GN=Pabp2
PE=2 SV=1
Length = 224
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 17 ELDDMKIRLKEMEEEATALRQMHAKVGNEMA--SKQDPAAGGSSLANREEVDSRSVFVGN 74
EL+ +K R+KEMEEEA ++QM ++V +MA S A SL ++E+D+RSV+VGN
Sbjct: 43 ELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGN 102
Query: 75 V 75
V
Sbjct: 103 V 103
>sp|O14327|PAB2_SCHPO Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pab2 PE=3 SV=1
Length = 166
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 5 DMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREE 64
D D ++T+ K EL +MK R+ EME EA LR M ++ NE + ++ ++E
Sbjct: 3 DQDALDTQEK--ELLEMKERVAEMEAEAAKLRAMQEQLDNETEALRN---------DKES 51
Query: 65 VDSRSVFVGNV 75
+D++SV+VGNV
Sbjct: 52 IDAQSVYVGNV 62
>sp|Q54ZS8|PABP2_DICDI Polyadenylate-binding protein 2 OS=Dictyostelium discoideum
GN=pabpn1 PE=3 SV=1
Length = 222
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSL-------ANR 62
ET + EL++MK R +EMEEEA L ++ + + + GG+ ++
Sbjct: 36 ETSFEDPELEEMKKRFREMEEEAKKLTELQNNLESNITGNNGVGIGGNIGGGGGLMNTDQ 95
Query: 63 EEVDSRSVFVGNVTVKRT 80
EE+DSRSV+VGNV K T
Sbjct: 96 EEIDSRSVYVGNVDYKST 113
>sp|P05659|MYSN_ACACA Myosin-2 heavy chain, non muscle OS=Acanthamoeba castellanii PE=3
SV=1
Length = 1509
Score = 33.5 bits (75), Expect = 0.39, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 8 MIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPA 53
+I N Q E+DD+K ++K++E+E AL+ +AK+ E ++ A
Sbjct: 848 LISQRNFQKEIDDLKKQVKDLEKELAALKDANAKLDKEKQLAEEDA 893
>sp|Q06704|IMH1_YEAST Golgin IMH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=IMH1 PE=1 SV=1
Length = 911
Score = 33.5 bits (75), Expect = 0.43, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 24/54 (44%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANRE 63
E E EL D K LKE E +R M VGNE+ +D SS N E
Sbjct: 370 ELETLNTELIDTKKSLKEKNSELEEVRDMLRTVGNELVDAKDEIKESSSKQNEE 423
>sp|Q6TY21|EPA2B_XENLA Embryonic polyadenylate-binding protein 2-B OS=Xenopus laevis
GN=Pabpn1l-b PE=1 SV=1
Length = 218
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 21/83 (25%)
Query: 14 KQVELDD-----MKIRLKEMEEEATALRQMHAK---VGNE----MASKQDPAAGGS---- 57
++ ELDD +++R++EMEEEA L+ + + +G M + G+
Sbjct: 18 EECELDDPELKAIRMRVREMEEEAERLKGLSGQDKSIGVSTRPCMQTTHSKMTAGAYTEG 77
Query: 58 -----SLANREEVDSRSVFVGNV 75
S ++E+D RSV+VGNV
Sbjct: 78 PPQPLSAEEKKEIDKRSVYVGNV 100
>sp|Q804A5|EPA2A_XENLA Embryonic polyadenylate-binding protein 2-A OS=Xenopus laevis
GN=Pabpn1l-a PE=1 SV=1
Length = 218
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 34/91 (37%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGS------------ 57
E E EL +++R++EMEEEA L+ + S QD + G S
Sbjct: 19 ECELDDPELKAIRMRVREMEEEAERLKGL---------SGQDKSIGVSPRPCMKLIHSKM 69
Query: 58 -------------SLANREEVDSRSVFVGNV 75
S ++E+D RSV+VGNV
Sbjct: 70 TAGEYTEGPPRPLSAEEKKEIDKRSVYVGNV 100
>sp|Q9Z0R7|TS1R2_RAT Taste receptor type 1 member 2 OS=Rattus norvegicus GN=Tas1r2 PE=2
SV=1
Length = 843
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 59 LANREEVDSRSVFVGNVTVKRTNVPGMKQHRPRRPNP 95
L N E+ F+G VT++R ++PG Q R RR P
Sbjct: 314 LHNLTELRHTGTFLG-VTIQRVSIPGFSQFRVRRDKP 349
>sp|Q75AF5|IMH1_ASHGO Golgin IMH1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=IMH1 PE=3 SV=2
Length = 887
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQD 51
+ E + EL D+K +LK EE +R M VGNE+ +D
Sbjct: 343 KVETLETELKDVKAKLKNSNEELETVRGMLKTVGNELVHARD 384
>sp|Q32NJ7|LRG2B_XENLA Glycosyltransferase-like protein LARGE2-B OS=Xenopus laevis
GN=gyltl1b-b PE=2 SV=1
Length = 723
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 15 QVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSV 70
QVEL+ RL+E EEE LRQ ++ NE +Q P GG+ N + RS+
Sbjct: 52 QVELES---RLREAEEENRRLRQQLGEIRNE---EQSP-GGGTEGDNSSHCEHRSL 100
>sp|Q8CIS0|CAR11_MOUSE Caspase recruitment domain-containing protein 11 OS=Mus musculus
GN=Card11 PE=1 SV=2
Length = 1159
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 2 EGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASK 49
E +M ++ + + Q+E+D +K RL +MEEE R K+ N++ ++
Sbjct: 213 EEKNMAVMRSRDLQLEIDQLKHRLNKMEEECKLERNQSLKLKNDIENR 260
>sp|Q9BXL7|CAR11_HUMAN Caspase recruitment domain-containing protein 11 OS=Homo sapiens
GN=CARD11 PE=1 SV=3
Length = 1154
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 2 EGDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASK 49
E +M ++ + + Q+E+D +K RL +MEEE R K+ N++ ++
Sbjct: 213 EEKNMAVMRSRDLQLEIDQLKHRLNKMEEECKLERNQSLKLKNDIENR 260
>sp|Q9UKZ4|TEN1_HUMAN Teneurin-1 OS=Homo sapiens GN=TENM1 PE=1 SV=2
Length = 2725
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 95 PFMVYQSRGAIIPPFLYSPYG 115
P V+ SRG +I LY+PYG
Sbjct: 2323 PLAVFSSRGQVIKEILYTPYG 2343
>sp|Q9WTS4|TEN1_MOUSE Teneurin-1 OS=Mus musculus GN=Tenm1 PE=1 SV=1
Length = 2731
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 95 PFMVYQSRGAIIPPFLYSPYG 115
P V+ SRG +I LY+PYG
Sbjct: 2329 PLAVFSSRGQVIKEILYTPYG 2349
>sp|Q9W6V6|TEN1_CHICK Teneurin-1 OS=Gallus gallus GN=TENM1 PE=1 SV=1
Length = 2705
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 95 PFMVYQSRGAIIPPFLYSPYG 115
P V+ SRG +I LY+PYG
Sbjct: 2303 PLAVFSSRGQVIKEILYTPYG 2323
>sp|Q8LPQ3|Y3084_ARATH BTB/POZ domain-containing protein At3g50840 OS=Arabidopsis thaliana
GN=At3g50840 PE=2 SV=2
Length = 569
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 30/53 (56%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANR 62
E + ++++D M+ R+ ++E+E L+++ AK+ E K AG S+ +
Sbjct: 490 ENQVLRLDMDTMRTRVNQLEKECLYLKKVIAKIDKESLLKAKHGAGKWSIGKK 542
>sp|Q86YC2|PALB2_HUMAN Partner and localizer of BRCA2 OS=Homo sapiens GN=PALB2 PE=1 SV=1
Length = 1186
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 56 GSSLANREEVDSRSVFVGNVTVKRTNVPGMKQHRPRRPNPFMVYQSRGAIIPP 108
G L +EE+ S++ VT RT++ +K P P P +IPP
Sbjct: 173 GKRLKEQEEISSKNPARSPVTEIRTHLLSLKSELPDSPEPVTEINEDSVLIPP 225
>sp|Q6PA90|LRG2A_XENLA Glycosyltransferase-like protein LARGE2-A OS=Xenopus laevis
GN=gyltl1b-a PE=2 SV=1
Length = 723
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 20 DMKIRLKEMEEEATALRQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSV 70
+++IRL+E +EE LRQ +V NE S GG+ N + RS+
Sbjct: 54 ELEIRLREAKEENRRLRQQLGEVRNEEQS----TGGGTEGDNSSHCEHRSL 100
>sp|P34562|YNP9_CAEEL GRIP and coiled-coil domain-containing protein T05G5.9
OS=Caenorhabditis elegans GN=T05G5.9 PE=4 SV=3
Length = 660
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 10 ETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQDPA 53
ET +L+ K+ + E+E++A RQ H K ++AS +D A
Sbjct: 294 ETRKAIEKLEKSKVTITELEQQADQTRQEHFKTVEDLASSRDKA 337
>sp|B9WN49|RTC1_CANDC Restriction of telomere capping protein 1 OS=Candida dubliniensis
(strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 /
NRRL Y-17841) GN=RTC1 PE=3 SV=1
Length = 1098
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 3 GDDMDMIETENKQVELDDMKIRLKEMEEEATALRQMHA-KVGNEMASKQDPAAGGSSLAN 61
G+ MDMI ++ RLKE E LR + NE S +A S ++
Sbjct: 758 GNLMDMINKASRNSSFSTTSFRLKEQERREHELRNTQNFRDENEKVSTHSKSAPISISSH 817
Query: 62 REEVDSRSVFVGNVTVKRTNVPGMKQHRP 90
E++D + + TN G+K P
Sbjct: 818 PEDLDDEN-------MSATNSAGLKSSPP 839
>sp|P25686|DNJB2_HUMAN DnaJ homolog subfamily B member 2 OS=Homo sapiens GN=DNAJB2 PE=1
SV=3
Length = 324
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 7/69 (10%)
Query: 5 DMDMIETENKQVELDDMKIRLKEMEEE----ATALRQMHAKVGNEMASKQDPAAGGSSLA 60
D D+ E E+ Q+ M L EME A H + G A QDP GG+
Sbjct: 246 DSDLSEDEDLQLA---MAYSLSEMEAAGKKPAGGREAQHRRQGRPKAQHQDPGLGGTQEG 302
Query: 61 NREEVDSRS 69
R E RS
Sbjct: 303 ARGEATKRS 311
>sp|Q9BTC0|DIDO1_HUMAN Death-inducer obliterator 1 OS=Homo sapiens GN=DIDO1 PE=1 SV=5
Length = 2240
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 8 MIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMA 47
M+E NKQ+E + +++EE+ ALRQ A VG MA
Sbjct: 1478 MLEELNKQIEE-----QKRQLEEQEEALRQQRAAVGVSMA 1512
>sp|A4WGC4|YIHI_ENT38 Der GTPase-activating protein YihI OS=Enterobacter sp. (strain 638)
GN=yihI PE=3 SV=1
Length = 171
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 27 EMEEEATALRQMHAKVGNEMASKQD-PAAGGSSLANREEVDSRSVFVGNVTVKRTNVPGM 85
E+ +EA +++ G+ S+ + +A GS+ N ++ D R + + T+ P +
Sbjct: 23 ELNQEARDRKRVKKHSGHSAGSRANGSSASGSTAQNSKQKDPRIGSKTPIPLGVTDTPVV 82
Query: 86 KQHRPRRPNPFMVYQS 101
KQH+P+ P + Q+
Sbjct: 83 KQHKPKSEKPMLSPQA 98
>sp|Q8C9B9|DIDO1_MOUSE Death-inducer obliterator 1 OS=Mus musculus GN=Dido1 PE=1 SV=4
Length = 2256
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 8 MIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMA 47
M+E NKQ+E + +++EE+ ALRQ A VG MA
Sbjct: 1470 MLEELNKQIEE-----QKRQLEEQEEALRQQRAAVGVSMA 1504
>sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2
Length = 1818
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 12 ENKQVEL----DDMKIRLKEMEEEATALRQMHA----KVGNEMASKQDPAAGGSSLANRE 63
ENK V+L DD K + E+ +A+ HA K+ E+A Q +SL +E
Sbjct: 925 ENKVVQLQRKIDDQNKEFKTLSEQLSAVTSSHAVEVEKLKKELAHYQQNQEADTSLQLQE 984
Query: 64 EVDS 67
EV S
Sbjct: 985 EVQS 988
>sp|Q6KIH7|DNAK_MYCMO Chaperone protein DnaK OS=Mycoplasma mobile (strain ATCC 43663 /
163K / NCTC 11711) GN=dnaK PE=3 SV=1
Length = 601
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
Query: 2 EGDDMDMIETENKQVEL------------DDMKIRLKEMEEEATALRQMHAKVGNEMASK 49
+GD +D E E + E+ D++KI+L ++EE A A Q K ++ SK
Sbjct: 525 QGDKIDPKEKEQTEKEITNIKDLILQDKIDELKIKLDQIEEVAKAFAQ---KAASKETSK 581
Query: 50 QDPAAGGSSLANREEVDSRS 69
+ GS A +E D ++
Sbjct: 582 NEQNEDGSIDAEIKEEDPKA 601
>sp|Q2N7Z9|SECB_ERYLH Protein-export protein SecB OS=Erythrobacter litoralis (strain
HTCC2594) GN=secB PE=3 SV=2
Length = 178
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 51 DPAAGGSSLANREEVDSRSVFVGNVTVKRTNVPGMKQHR 89
DPAAGG+ NR + ++ +++V+ N PG+ Q +
Sbjct: 14 DPAAGGNGADNRPTAGFITQYIKDMSVENPNAPGVYQWQ 52
>sp|Q8CG46|SMC5_MOUSE Structural maintenance of chromosomes protein 5 OS=Mus musculus
GN=Smc5 PE=2 SV=1
Length = 1101
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 13 NKQVELDDMKIRLK--EMEEEATALRQMHAKVGNEMAS 48
N+ +EL D ++RLK E+ E T RQ+ K+ +++AS
Sbjct: 680 NRHLELKDNELRLKKKELLERKTRKRQLEQKISSKLAS 717
>sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1
Length = 1846
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 12 ENKQVEL----DDMKIRLKEMEEEATALRQMHA----KVGNEMASKQDPAAGGSSLANRE 63
ENK V+L DD K + E+ +A+ HA K+ E+A Q SL +E
Sbjct: 926 ENKVVQLQRKIDDQNKEFKTLSEQLSAVTSTHAMEVEKLKKELARYQQNQEADPSLQLQE 985
Query: 64 EVDS 67
EV S
Sbjct: 986 EVQS 989
>sp|Q2KYJ8|Y2277_BORA1 UPF0061 protein BAV2277 OS=Bordetella avium (strain 197N)
GN=BAV2277 PE=3 SV=1
Length = 490
Score = 29.3 bits (64), Expect = 8.4, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 24 RLKEMEEEATAL-----RQMHAKVGNEMASKQDPAAGGSSLANREEVDSRSVFVGNVTVK 78
RL EA AL ++H + E+AS Q P GG +LA V+ G +
Sbjct: 35 RLLHANAEAAALIGLDPAELHTQAFLEVASGQRPLPGGDTLAAVYSGHQFGVWAGQLGDG 94
Query: 79 RTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGK 118
R ++ G R P Q +GA + P YS G G+
Sbjct: 95 RAHLLG----EVRGPGGSWELQLKGAGLTP--YSRMGDGR 128
>sp|O95718|ERR2_HUMAN Steroid hormone receptor ERR2 OS=Homo sapiens GN=ESRRB PE=1 SV=2
Length = 508
Score = 28.9 bits (63), Expect = 9.1, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 79 RTNVPGMKQHRPRRPNPFMVYQSRGAIIPPFLYSPYGYGK 118
++N PG+ RP P P RG I P +P G GK
Sbjct: 466 QSNSPGIPNPRPSSPTPL---NERGRQISPSTRTPGGQGK 502
>sp|P08964|MYO1_YEAST Myosin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MYO1 PE=1 SV=3
Length = 1928
Score = 28.9 bits (63), Expect = 10.0, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 7 DMIETENKQVELDDMKIRLKEMEEEATALRQMHAKVGNEMASKQD 51
DM T+ +++ +K L+EME + L + + K NE+ + QD
Sbjct: 859 DMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQD 903
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,575,088
Number of Sequences: 539616
Number of extensions: 1853573
Number of successful extensions: 6423
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 6364
Number of HSP's gapped (non-prelim): 86
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)